lowQualScore : 111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111 1111 1 2222 111111 11 1111 11 11111 1111 222222 11 111111 11 11 111111 1 111 1111 11 111 1 111 1111 22 333333333 1 333333 222 11 1 22222 11 33333 33333 11 11 222222222222222222222222222222222222222222222222222222222 22222 1 333333 222 2222222222222222 8888888888888888888888888888888888888888888888888888888888888888888888888888 1111111111 11 111 111 1111111 1 222222 11 2222222222222 111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111 2222 5555555555555555555555555555 111 3333333333 1 1 11 1111 1 2222222 33333333333333333 111111 44444444444 1111 11111 111 1 111111 11111 888888888888888888888888888 111111 11111 111111111111 33333333333 11 1111 66666666666 111 33333333333333 222 22 111 33 77777777777777777777777777 1 111 1111 1 1 777777777777 44444444444444444444444444444 11111 2222222222 111 22 666666666666666666666666666666 111 1 888888888888888888888888888888888888888888888888888888888 33333 111 11111 11 222222 11 1 1 1 1 5555555555555 111 11 66666666666666666666 222 111 33333333
lowQualScore : 5 5 77 777 5 5 5 5 5 22222 66 0000 5 5 5 66 0 5 5 5 5 4444 5 5 5 888 5 888888 5 11 55 0 5 77 66 5 4444 5 66 11 66 5 00000 0000 5 6 66 66 666666 5 5 5 5 5 11 5 2 5 5 5 444444 5 5 33 5 5 77 5 77 5 00 666666 5 5 1 000 77 5 77 0000 11 000 1 888 6 0000 44 99 6 000000000 3 5 0 777777 0 222 8 8 11 6 88888 6 33 33333 77777 6 11 8 11 8 0 0 0 666666666666666666666666666666666666666666666666666666666 6 11111 3 7 6 111111 6 99 666 6 8 6 99 6 3 3333333333333333 6 3333333333333333333333333333333333333333333333333333333333333333333333333333 9999999999 33 1 5 5 888 222 000 77 5 5 0 5 5 8888888 5 5 5 222222 33 6 6 5555555555555 888 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 6 111 0000 6 6 6 88 0000000000000000000000000000 5 000 5 5 7777777777 1 7 5 5 5 33 77 5 8 2222 66 1 4444444 7 5 5 22222222222222222 999 6 999999 99 33333333333 6 9 6 6 6 5555 33333 6 000 1 7 99 999999 6 6 6 00000 6 666666666666666666666666666 6 6 5 666666 6 6 6 66666 6 99 6 999999999999 00000000000 55 6 88 7777 5 11111111111 8 8 8 88 444 88 33333333333333 222 8 77 444 00 8 99999999999999999999999999 11 8 0 6 6 1 6 6 111 66 77 99 2222 3 6 6 6 2 222222222222 5 6 6 6 99 99999999999999999999999999999 9 1 6 6 55555 6 6 6666666666 3 666 3 6 11 99 6 4 8888 5 5 888888888888888888888888888888 6 9 6 77 6 3 111 1 666666666666666666666666666666666666666666666666666666666 8 44444 0 999 9999 8 8 44444 0 11 3 000000 44 0 0 0 0 2222222222222 111 2 8 6 88 3 11 44444444444444444444 8 8 222 1 444 77 8 44444444
lowQualScore : . . .. ... . . . . . ..... .. .... . . . .. . . . . . .... . . . ... . ...... . .. .. . . .. .. . .... . .. .. .. . ..... .... . . .. .. ...... . . . . . .. . . . . . ...... . . .. . . .. . .. . .. ...... . . . ... .. . .. .... .. ... . ... . .... .. .. . ......... . . . ...... . ... . . .. . ..... . .. ..... ..... . .. . .. . . . . ......................................................... . ..... . . . ...... . .. ... . . . .. . . ................ . ............................................................................ .......... .. . . . ... ... ... .. . . . . . ....... . . . ...... .. . . ............. ... ............................................................................................................................................................................................ . ... .... . . . .. ............................ . ... . . .......... . . . . . .. .. . . .... .. . ....... . . . ................. ... . ...... .. ........... . . . . . .... ..... . ... . . .. ...... . . . ..... . ........................... . . . ...... . . . ..... . .. . ............ ........... .. . .. .... . ........... . . . .. ... .. .............. ... . .. ... .. . .......................... .. . . . . . . . ... .. .. .. .... . . . . . ............ . . . . .. ............................. . . . . ..... . . .......... . ... . . .. .. . . .... . . .............................. . . . .. . . ... . ......................................................... . ..... . ... .... . . ..... . .. . ...... .. . . . . ............. ... . . . .. . .. .................... . . ... . ... .. . ........
lowQualScore : 7 7 99 777 7 0 0 0 0 55555 99 6666 0 0 0 99 0 0 0 0 0 0000 0 0 0 888 0 111111 0 99 11 5 0 55 99 0 8888 0 99 99 99 0 88888 6666 0 0 99 99 999999 0 0 0 0 0 99 0 5 0 0 0 444444 7 7 66 7 7 99 7 99 7 77 444444 7 0 4 000 99 7 99 6666 77 000 4 333 7 0000 33 22 7 333333333 3 6 8 000000 8 000 0 0 00 0 00000 0 00 88888 22222 4 00 0 00 0 8 8 8 888888888888888888888888888888888888888888888888888888888 7 88888 3 8 7 777777 7 22 777 7 3 7 22 7 5 7777777777777777 7 5555555555555555555555555555555555555555555555555555555555555555555555555555 2222222222 66 4 7 7 333 444 000 99 7 7 7 7 7 6666666 7 0 7 444444 66 7 7 2222222222222 333 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 7 777 8888 7 7 7 33 9999999999999999999999999999 7 000 7 7 4444444444 4 1 7 7 7 66 99 7 7 1111 11 4 6666666 0 7 7 55555555555555555 444 7 222222 22 33333333333 7 8 7 7 7 2222 33333 7 888 2 8 22 222222 7 7 3 00000 7 333333333333333333333333333 7 7 2 222222 7 7 7 77777 7 22 7 555555555555 88888888888 88 7 88 0000 6 66666666666 0 0 0 88 000 88 88888888888888 000 0 00 000 66 0 88888888888888888888888888 66 0 8 7 7 0 7 7 222 33 77 22 7777 5 7 7 7 2 222222222222 2 7 7 7 22 88888888888888888888888888888 0 0 7 7 00000 7 7 7777777777 2 555 2 7 33 22 7 9 0000 7 7 333333333333333333333333333333 7 3 7 77 7 5 777 2 777777777777777777777777777777777777777777777777777777777 0 00000 8 999 7777 0 0 88888 8 00 2 888888 00 0 0 0 0 2222222222222 000 5 0 0 88 0 00 88888888888888888888 6 0 666 0 000 44 0 88888888
consensus : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-TGT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AGC--G--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACA-T------TAT-GAC-GAG--T-AA-GATT--C-TT--GAA-AC-AAAAGT------CGTGA-AAAATTTCACTAGCAAC---TAAC--T-GA--TG-A-TTCCAA-TG---ACAG-TTTCTCT---ACT-TTG-C--ACTTG-CTTTG--TA-TCG-------T-ATGGT-ACATTTGAAATTTT-----ATGATT-T-ATCAAC-AAAAA-TGA--CGCTAAAT----TACAAAG-ATATTTA-AGTCTC-G-ACGTACT--CCA-TC--TTCC-GGTTACAATAAAGTTA-----CTA---------C-------TA-GTGAAT--T--CTA---T-AAAT------AAATGT-TTT---C-TTTTCC-CCTGA-TTAA-TA--GC-TC--CTTTTGT--AC-AAAATATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------G-----TA-----------------C-------TT------------GTG---A---------TTA----GCTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTA---T--TT--GG-ATTATT-C-GG-A--------TAGCT---CTATA----C---GA--TCTA----AATC--TAAA-C-GG-TC----------------CTCTTT-N-A-GCGT-T-ACA--CTTTTCCA-GTGTAAT--------------------CA----ATTA-G---------A------------T-TTA--TC---AT---AGAT---------N----------CA-A---TGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG-TT-----GGGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAAGATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CATA------TT--CA-----------CA-AACTTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-ATCTA--TTAA------TT-A-TTATTT-T--ATT-ACT-----------AC--G---T-A----NTTGT-T-CTTCATGCTT-T-TGATATTGA-TTT-T-G-----TAGT-TT--TAC-TTAGTTC---A-T------TTT--NA-------TTT--A-TTTCT-GTTTT----AATGAATAT-A--------TATTA-TT-CAT-TA-A---GCAG-TAC--------AGA-T-ATTT---CAG-CAAGATAT-TTT---TTCCA-ACA-CATA------CATTGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AAC-TTTACA-TA-A-T---TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AA--A------AAGAGAACCTAATT-T-TT---C-AG-TA-TTGT-A-CT-T---TTAAAAT-A-AACTGATTA-TG-NAT-CAA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT---AA-A-GT--G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAAC---CATTCATT-----------G---------------TT----------CGCCC-T----C-AGTGCAAAAT-A-TT--TTAAGG-TACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--ATN-AC-C-TAG-AAACATTCAG-ACCGCG----C----AA-T-ACATTCCGCT-ATCGGGTC-TGGA--AATGG----NG--------GGAATGGCTTAGAATTC-AAAAAAAATA---TTTTAG-AATTACTTTTGGATAGACTTTTGCA
Reference ( gi|3 ) : CCAGT-C-AATT--TGTCA-ATC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-TGT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTCGA--TTT--AGC--A--TGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACA-T------TAT-GAC-GAG--T-AA-GATT--C-TT--GAA-AC-AAAAGT------CATGA-AAAATTTCCCTAGCAAC---TAAC--T-GA--TA-A-TTCCAG-TG---ATAG-TTTCTCT---ACT-TTG-C--ACTTG-ATTTG--TA-TCG-------T-ATGGT-ACATTTGAAATTT------ATGATT-T-ATCAAC-AAAAA-TGA--CG-TAAA-----TGCAAAG-ATATTT--AGTCTC-GTACGTACT--CCA-TC--TTCC-GGTTACAATAAAGTTA-----CTA------GGCC-------TA-GTGAAT--T--CTA---T-GAAT------AAATGT-TTT---C-TTTTCC-CTTGA-TTAA-TA--GT-TC--CTTTTGA--AC-ATAATATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------G-----TA-----------------C-------TT------------GTG---A---------C------GCTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTATAAT-TTA---T--TT--GG-ATTATT-C-GG-A--------TAGCT---CTATA----T---GA--T-------AGTC--TAA--------C----------------CTCTTT-C-A-GCGT-T-ACA--TTTTCCCA-GTGTAAT--------------------CA----ATTA-G---------A------------T-TTA--TC---A----AGAT---------T----------CA-A---TGGAAATTA---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATGATT-----GGGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CAAA----ACAAC-GTT-AAACGATG--GGGGTGG-G-GGT---GGGGTGGGG----TAC-A-TTA-CATA------TT--CA-----------CA-AACTTTC-TT-T-GC-AC-TTGCA---T-GTGAC-TAC-ATGTATTTA--TTAA------TT-A-TCATTC-T--ATT-ACT-----------AT------T-A----CTTGT-T-CTTCATGCTT-T-TGATATTGA-TTT-T-G-----TAGT-TT--TAC-TTAGTTC---A-T------TTT--AA-------TTT--A-TTTCT-GTTTT----AATGAATAT----------CATTA-TT-CAT-TA-A---GCAG-TAC--------AAA-T-ATTT---CAG-CAAGATA--TTT---TTCCAAACA-CATAAT----CA-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTTGCTGTG-TAA-TCTG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AAC-TATACA-TACA-T--GTATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AA--A------AGGAGAACCTAATT-T-TT---C-AG-TA-TTGT-T-CT-T---TTAAAAT-A-AACTGATTA-TG-TAT-CAA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT---AATACGT--G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAAC---CATTAATT-----------G---------------TT----------CG---------C-A----AAAAT-A-----TTAAGG-TACGGCCCTAGAAACGT-G-CA-G-ATTGTTCAA--TCCACATTG-G--ATT-AC-C-TAG-AAACATTCAG-AC--TG----C----AA-T-ACATTCCGCT-ATTGGGTC-TGAA--AATGG----AG--------GAAATTGCTTAGAATTC-AAAAGAAATA---TTATAG-AATTACTTTTAGATAGACTTTTGCAT
gi|2 : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-C---G-CATTTA-CA-C-GT-TGT-A--TAT-AATGGAAATTAA-TTTTGAATA-A-A--AAA-AAATG--TT-TACCAAAAAT-AT--AGCG--TTAGAAAGTACT-TCTTAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AGC--G--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACA-T------TAT-GAC-GAG--T-AA-GATTTTC-TT--GAA-AC-AAA-GT------CGTGA-AAAATTTTACTA-CAAC---TAAC--T-GA--TG-G-TTCCAAATG---ATAAATTTCTCT---ACT-TTG-C--ACTTA-CTTT---TA-TCG-------TTATGGTTACATTTGAA--TT------ATGATT---ATCAA--AAAAA-TGA--CG-TAAA-----TACAAAG-ATA-----AGGCTCAGCTCATACT--CCA-TC--TTCC-GGTTACAATAAAGTTA-----CT---------------------GTGAAT--TTTCTA---T--AAT------AAATTG-TTT---C-TTTTCC-CCTGA-TTAA-T----TCTC--CTTTTGATAAA-ATA-TATTT-CA--GC-AAACAA-----C-T-T------TTTT-A-TT------G-----TC-----------------C-------TTTACGTAATACATGTG---A---------TTATT--GCTGGAAGA--AGGGT--CACG--T-C-AA-A-A-T---TTG---GG--T-ATG-GAAGTCTG-TTTCGG-------G-TATTCATTTTAGAAT-ATA---T--TTT-GG-ATTATT-CCGG-A--------TAGCT---CTATA----C---AA--TCT-----AAT---TAAATCAGGATC----------------CTCTTT-A-A-GCGT-T-ACAC-TTTTTCCA-GTGTAAT---------------------G----GTTA-G---------AGAAGATGTTATTT-CTA--TT---A----AGAT---------TTAGCTAGGTACA-A---TGGAAATTG---CATT-TATT-TTGTGG-AAA--TT----T-CTATTTGT-ATT-TT-----GGGAAT-A-----A-TA-CA---T------ATGATCTGTTCATT-TT-TTG-TG--CCT--TGA-CGAA----ACAAT-GTT-AAAAGAAG--GGGG-GG-G-GGG---GGGGGGGGGAGATTAC-A-TTA-CATA------TT--CA-----------TA-AACTTTCTTT-T-GC-GC-TTGCA---TCGTGAC-TAC-ATGGATCTA--TTAA------TT-A-T-ATTT-T--ATT-ACT-----------ACATG---T-AATATTTTGT-T-CTTCATGATT-T-TGTTATTGA-TTT-T-G-----TAGT-TT--TAC-TTAGTTC---A-T------TTT--CAGTTTGATTTT--A-TTTCT-GTTTT----AATGAATATAAGG------TATTA-TT-TAA-T--A---CCAG-TACGGGGGAAAAAA-CAATTTTTGCAG-CAAGATATTTTT---TTCC--ACA-CATATTGCTGCATTGTATACTGTACATG-TATACTTCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-G-----CGTGTTTTGA--AAGGTC---GC------CAA-ATT-AA-AAC-TATACA------------------TAT-ACTCACCGTGTT-ATA-AAG--GGTTT---------------AA--AAATTTTAAGAGAA-CTAATT-T-TT---C-AG-TA-TTGT-A-CT-T---TTAAAAT---AACTGATTA-TGATAT-------------------TACCGCTTTTGATGC-GTGC-TAGG------A-TA-------AA---GT--G-ATTTCGTTTTCGCT-CCTTGCA-GACCG-TTTTTCGTTCAATGCAAAC---CATTCATT-----------GTTTAAACCAAACCATTT----------CGCCCTT----C-AGTGCAAAAC-ATTTTTTTAA-G-TACGGCCCTAGAAACGT-G-CAGG-ACTGTTCAA--TCCACATCGTG--ATA-AC-CGTAG-AAACATTCAGAACCGCG----C----AA-T-ACATT-CGCT-ATCGGGTC--GGA--AATGGAGCTAG--------GAAA-GGTGTAGAATTCAAAAAAAAATA---TTTTAG-AATTA-------AAAAACTTTTGCA
gi|7 : CCAGT-CCAATT--TGTTA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTC-CA-C-GT-TGT-T--TA--AATG-AAATTAA-T---GAA-A-G-A--GAA-AAAAGGTTT-TACCAAAATT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TG--C--CA----CA-TTTTGATTTTT--AGCCGC--CGATTTAC-A-C-AC-TG-ACGCT-T-TCCA-T-ACA-T------TAT-GAC-GAGTAT-AA-GGAT--C-TT--G-A-AC-AAAAAT------CATGA-AACATTTCACTAGAAAC---TAAC--T-GA--TAGA-TTCCAA-TG---ATAG-TTTTTC----ACT-TTG-C--ACTTG-CTTTG--TA-TCGT------T-ATGGT-ACATTTGAAATTT------ATGA-T-T-ATCAAC-AAAAA-TGA--CG-TAAA-----TACAAAT-ATATTTAAAGTCT-----CGTACT--CCA-TC--TTCCGGGTTACAATAAAGTTG-----------------C-------TA-GTTAAT--T--CTA---CAAAAT------AATTGT-TGT---C-TTTTCC-CCTGA-TTA---A--GT-TC--CGTTTGT--ACAAAAATATTT-CG--GC-AAACAA-----CAT-TATAAACTATA-AATTTACGTAA-----TA-----------------C-------TT------------GTGATTA---------C------GCTGGAAG---------------------A-A-A-TAT-TA----AG--T-ATG-GAGGTATG-TT-CGG-------G-TATTCATTTTAGAAT-TTA---T--TT--gataa
gi|19 : tCCAGT-C-AATT--TGTCA-CAA-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-TGT-A--TAT-AATG-AAATTAA-T---GAA-A-T-AATAAA-AAATGT-TT-TACCAAAAAT-ATC-AGCG--T-AG-AAGTACT-T--TAA-TT--AAC--AATTCAAA--A--TA--A--CA----CATTTTTGA--TTT--AGC--G--CGATTTAC-A-C-AC-T---CGCAATATACA-T-ACA-G------TAtggcgcgtataccaatctaatcaaaatcagatcctctttgctggctgatgtaatggtgagagaagatgttatttacattattcttttgtatgttgggaataacattacatatgatctgtcatctttgtgccttgacgaaacaacgttaaaatatggggggggggggggggggg
gi|14 : tCCAGTTC-TAAT--TGTCATACC-A-CCTCAA-GAA-AATTG-CAATCACTTTTTAGTAGG----TTGTA-T-CT--C-CATTTA-CA-C-GT-T-T-CGTTAT-AATG-AAATTAAAT---GAA-A-TGA--AAA-AAATG--TT--ACCAAAAATTATC-AGCGCGT-AGAAAGTACT-T--TAA-TT--AACAAAATTCAAA--ATGTACTC--CA----CA-TTTTGA--TTTTAAGC--G--CGATTTACAA-C-AC-TG-GCGC--T-T-CA-T-ATG-T------TAT-GACTAAGT-T-AA-GATT--C-TT--GAA-GA-AATAGTACATGACATGA-AACATTTCACTAGCAACTAATAAC--T-GC--TG-A-TTCCAA-TG---ACAG-TTTaa
gi|5 : tGC-C-AATTATTGTCA-ACCTAACCTCAA-GAA-AATTG-CAA-CAC-----A--AGGAGATTT-TA-TTCTTGG-CATTTA-CA-C-GT-TGT-CATTAT-GATG-AATCAAA-T---GAA-A-T-AGAAAA-AAATG--TT-TACCCCAAA--ATC-AGCG--T-AGAAAGTACTAT--TAAATTCAAAC--AATTCAAA--AT-TA--A--CAAGACTA-TTTTGA--TTT--AGC--GAGCGATTTAC-A-C-AC-TG-ACGC--T-TACA-T-ACA-T------TATAAAC-GAT--T-AAGGATT--C-TT--GAA-AC--AAAGT------CATGATAAAATTATACTAGCAAC---T-AC--T-GAGTTG-ATTTCTAA-TGGATACAGTTTTCTCTAAAACTATTG-CAGACTTGCATTTGGCTACTCG-------A-ATGGTAACTTTTGAAATTTTTTGACATAATCAA-ATCAAC-AAAAATTAA--CG-TAAAT----TACAAAGAATATTT--AGTCTC-GTACGTACTCCCCA-TCTGTTCC-GGTT--GATAAAGTTAAACTTCTATTGTATAACCGGAAGATTA-G-AAATAAT--CTATGTT-GAATTCTGTAAAATGTATTTTCCC-TTTTCCTCATGA-TTAC-TATTGT-GCCGCTTTTGGT-TC-ATAATATTTCCG--GCAAAACAA-----C-T-C------TATATAATT------G-----TAAATTTAACGTAATATCTC-------CT------------GTG---A---------TTACACGGCTGGGAGG--AAGGTTACACGT-TTC-AACA-ATTAC-TAGAAAGGCTT-ATGCGAAGT-TG-TT-CGGCATAATTGTTATTCA-ATTAGAAT-TTA---TTCTT--GGTATTATT-C--G-A--------TAGCT---CT-TA----TTGCGA--TCTA----ATTC--TAAAATAGATTC----------------ATCTTTAT-ATGCGT-TAAGA--CTTTTCCA-GTG
gi|11 : tGT-C-AATT--TATCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AG------T-TA-T-CT--GCCATTTAGCACC-GT-TGTCC--TATAAATG-ACATTAA-T---GAA-A---A--TAA-AAATG--TT-TACCAAAAAT-ATCAAGCG--T-AGAAAGTACT-T--TAA-TT--AACA-AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT---TC--G--CG-CTTAC-ATC-ACTTG-ACGC--T-TCCA-TAACA-T------TAT-GAC-GAG--T-AA-GATT--C-TT--GAA-AC--AAAGT------CATGA-AAAATTTCACTAGCAAC---TAACGTT-GA--TG-A-TTCCAA-TG----TAG-TTACTCT---ACT-TTGCC--ACTTG-CTTTG--TG-TCG-------T-ATGG--ACATTgacatggttaagaagaagaataaatgttaagtcttcaaattataatttatctctagcatacataggaaaattggagcatatattattgtgggaaatgttatattgtatttgtatgatttgtgcggaaataaggacataaattaagattggtcaatttctgatgacctgttgacgaagctaacagccttaaaaaagataggaggtgggcagggatacaattacatattcagtgatcttcatcaaactttcttttgcgccttgcatgtgactaagctgttatatcacacttattactaccaggtataattgttcttcatgttttgatattgatttctgtagttttacttagttcatttttcagtttgcatttaattt
gi|1 : -C-AATT--TGTCA-ACC-AACCTCAAAGAACAATTGGCAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-CCGTGTAT-T--TAT-AATG-AAAATTA-T---GAA-ACT-A--AAACAAATG--GCGTACCAAAATT-AGC-CGC---T-AGAA-TTACC-TACTAA-TT--AAC--AATTCAAACGAT-TA--AGCCA----CT-TCTTGA--TTT--AGC--G--CGATT-AC-A-CCAC-TGGACGC--T-TCCAAT-ACA-TGCCCCATAT-GAC-GAG--TCAA-GATT--CCTT--GAA-ACAAAAAGT------CGTG--AAAATTTTACTAGCACA---TAAC--TGGA--TG-G--TCCAA-TG---ATAA-TTTCTCT---ACT-TTA-C--ACTTACCTTTG--TA-TCGTATACAAT-ATGGT-ACATTGAAAATTTTAG---ATGATT-TCATCAAC-AAAAA-TGACCCGCTAAATTTATTACAAAG-ATA--C--AGTCT-----CATACT--CCA-TC--TTCC-GGTTACAATAAA-TTA-----CTA------G----------TA--TAAAT--T--TTA---T-AAA-------AAATGT-TTT---CTTTTTCC-CCTGA-TT-------GC-TC--CTTCTGT--AC-AAAATATTT-CGGCGC-AAACAAGCAATC-TAT------TTTA-AATT------G-----TA-----------------C-------TTAA----------GTA---A---------T------GCTGGAAGATCGGGGTC-CACGATTTC-AA-A-T-TG--TAG---GG--TCATG-AAGGTCTG-TA-TTG-------G-TATTCATTTTAGAAT-ATAGTTC--TT--GG-ATTATCGT-GG-A--------T-GCTC--CTATACATTT---AA--TTAA----AATC--AGAAT------C----------------CTCTTT-CAA-GCGT-T-ACA--CTTTTCCA-GTG-AAC--------------------TACATGGTTA-GAGAAACAGAA------------TGTTATTTC---ATAGTAGATTAGCTAGGGT----------TA-AACGTGGAAATTG---CA-T-TATT-TTGTGG--AATG--------CT-TTTGTGATG-TT-----TGGAAT-AA---CA-TACCATACT------ATGATCTGATCA-T-TTCTTG-TG--CCT--TGACCGAA----ACAATGGTTAAAAGGATAACGAGATGGCT-GAC---GGGG-GGGGAC--TAC---TTA-CATA------TT--CA-----------TA-ATCTTTC-TTCT-GCGGC-TGGCACTGT-GCGAA-TAC--TGGATCTATTTTAAAATATGTC-A-TTATTT-T--ATT-ACTACGCGCTTATAAT------T-A----TTTGTCT-CTTCATGCTTATATGTTATTGA-TTT-TCGTAAGCTAGTATT--TAC-TTAGTTTCTAA-T------TTT--CA-------GTT--ATTTTCTGGTCTTTACAAATGAATAT-----------ATTATTT-CATATATA---GCAGTTAC---------AA-C-ATCTG--CAGACAAGATA--CTTTTATTTC--ACA-CATAA-----CATTGTATG-TAT--ATGCTCAAC-TCATTGAAAA-A-TCC-TATAGT-AGTGGGT-TG-TGA-TACGCGCA----GTG---TGA--AAAGTC---GC-AAACT-----TTCAA-AACTTATACA-AAAA-T-----TATAC-----ACTCACCATGTT-ATACAAGCAGG--T---------------AAACA------AGAAGAACCTAATT-TCTT---CAAG-TA-TTGT-A-CTAT---TGAAAATAA-AACTGATTA-TGAGAT-CAA-CG--TGTGAA--TATACCGACTTTGACGCGGTGC-TAGA-------------T---AA-AAGT--G-A-TTCG-TTT-GCTCCCGTGCAGGACCG---TTTCGTTCAA-GCTATCATTCATTAGTTTAAACCAAACCA---------------TT----------CGCCCTTT---C-AGTGCAAAAT-ACTT--TTAA-G-TACGG-CCTATAAACGT-G-CA-G--CTGTTC----TCC-CATCG-GAAATA-AC-C-TAGAAAACAGTCAG-AC--CGCCGCC----AATT-ACATTCCGCT-ATCAG----TGGA--AATGG----CGGGCACTCAGGGATGGCTTAGAATTC-AAACAAATTATTTTTATAGAAATTAatcataaaatcattaaacaatcataataagtttaattaacaattaagaaaactaaattcatgaaaattgtttaa
gi|4 : tcCCTCA--GAA-AATTG-CAA-CAC-----A--AGT----TT-TACT-CT--GGCATTTA-CA-C-GT-TGTTC--TAT-AATG-AATTAAA-T---GAA-A-T-A--A----------------------T-AT--AGTG--T-AGAAAGTCCCCT--TAA-TT--AAC--AATTCAAA--AT-TG--A--CA-----A-TTTTGA--TTT--ATC--G--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACATT------TAT-GAC-GTG--T-AA-GATT--C-TTGCGAATAC-AAAAGT------CATGA-AAAATTTCACTAGCA------AAC--T-GA--TG-A-TTCCAA-TG---ACAG-TTTCTCTG--ACT-TTT-G--ACTTG-CTTTG--TA-T-G-------T-AAGGT-ACATT--AAATGT------ATGATT-T-ATCAACAAAAAA-AGA--CGCTAAA-----TACAAA--ATATTGA-AGTCTC-G-AC-TACT--CCATTC--TTCC-GGTTAGAA-AAAGT-------------------C-------TATGTGAAT--TA-CTA---T--AAT-------AATGT-TTT---TATTTTCCGCCTGATTTAATTG--GC-TT--CTTTTGT--AC-AAAATATTT-CG--GC-AAAC-G-----C-T-T------TATC-AACT------GTAATTTA-----------------CGTTATAATT------------GTG---A---------TTA----GCTGGAAGA--GGG----CACG--TTCAAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTGTTT-CGG-------G-TATTCATTTTCGAAT-TTAT--T--TT--GG-ATTATT-C--G-A--------TAGCT---CTATA----C---AA--TCTAATTAAATCAATAT--------C----------------GTCTTT-A-A-GCGT-T--CA--TTTTTCCATGT-TAATGGTTAGATAAGATGTTATTGCA----ATTA-G---------A------------T-TTG--TC---T----AGA----------T----------CA-A---TGGACATTG---CC-T-TGTT-TAGTGG-GAATG---------------------TT-----GGGAATAAA---AA-TA-CA---TAAACAAATGGTCTG-TCATT-TT-TTG-TGGCCTT--TAA-CGAA----ACAAG-ATTAAAAAGAT------GCGG-G-G----------GAAA----TACAA-TTAGCATA------TT--CATTC--------CACAAC-TTC-GT-T-GT-GC-TTGCT---G-GTGACGTAC-ATGTACATA--TTAA------TT-A-TTCTTT-T--ATT-ACT-----------ACATG---T-ATT--TTTGT-T-CTTCATGCTT--------TTGA-TTT-T-G-----TAG--TT--TAT-TTAGTTC---ATT------TTT--AG-------TTTG-A-TTTC---------------AATAT----------TATTA-TT-CAT-TA-A---GCAG-TAC--------AGA-T-ATTT---CAG-CAAGATA--TTT---TTCCACACA-CAT--------A-TGT-CA--GT----------T-TCAATGGAAATATTCTATATATT-AGTGGCTGTGTTGA-TCC--GC-ATTCGTG-CTTGA--AAGGT----GCAAAATTCAAGATTCAA-AAT-T-TACA-TATG-TTACTATGTACCTATAACTCACCGTCTT-ATA-A----GG--T---------------AA--A------A-GAG-ATCTAATT-T-TT---C-AG-TA-TTGT-A-CT-T---TTAAAAT-A-A--TGATTA-TG-AAT-CAA-CGATTATG-A--TATACCGATTTGGACGC-GTG--TAGATC-ACTACCA-CCT-------TGT-----------TTTCGCT-CCGTGCA-GACCGATTTTTCGTTC-ATGC-AAC---CATTCATTG----------G---------------TT---------------------C-A----AAAtcatactttctgcacgataattgaacaaaataat
gi|17 : ------AAATAT-TTC---A-TTTTCC-CCGGA-TTAA-TC--GC-TC--CATTTTT--AC-AAAATATTT-CG--GC-AAACTG-----C-T-T------TAGA-AATT------G-----TAGATTTACGTAATA----C-------TT------------GTG---ATTAGTAATAC------ACTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAA---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTAT--T--TT--GA-ATTATT-C-GG-ATATCCATCTAGCT---CTATA----C---AATCT-------AAT---TAAAATCAGATT----------------CTCTTT-C-A-GCGT-T-ACA--TTTTTCCA-GTGTAAT--------------------caagc
gi|6 : ACA--TTC-AA-ATG-TAAGTAG---GG--T-ATG-GCAGTCTG-TT-CGG-------G-TATTCATTTTAGAATGTTA---T--TTTCGG-ATTATT-C-GGGA--------TAGCTTTGCTATA----T---TA--T-------AATC--TAA--------TTAAAAAAATCAGGATACTCTTT-C-A-GCGTGT-ACACTTTTTCGCA-GTGTAAC--------------------CA----ATT--G---------A------------T-TTA--TC---AT---AGAT---------A----------CA-A---TGGAAATTA---CA-T-TATT-TTG-GG-AAATTTT----TCCT-TTTGT-ATGTTG-----GGGAAT-AA---CA-TA-CA---TAATTA-ATGATATG-TCA-TGTT-GTG-TG--CCT--TGG-CAAA----ACAAT-GTT-AA--GATA--GGGGTGG-G-GGT----------------TAC-A-TTA-CATA------TTTCCA-----------CA-TAC------T-T-GC-A------A---T-GTGAC-TATAATGTATCTA--TCAA------TT-ATTCATTC-T--ATA-ACT-----------AT------TGA----CTTGC-TGCTTCATGTTT-T-CGATATTGA-TTT-T-G-----TAGT-TTTGTACTTTAGTTC---A-T------TTT--GA-------TTT--A-TTTCT-GTTTT----AA-GAATAT----------CATTA-TTACAT-TA-AAGGGCAG---C--------AGA-T-ATTT---CAG-CGAGGTAT-TTT---TTCCAAACATCGT--------A-TGTACA-TGT--A---TATGC-TCATTGGAAATATTCC-TATAGTAAGTTGCTGTG-TAACTCTG-GCAATTTGTG-CTTGAACAAGGTTCCGGCGGAATTCAA-ATTCAAGAAC-TTTACA-T--------TATGTACTAAT-ACTCACCGTGTTAATA-AAG--GG--TAAAAAGCTCGGGGTAAA--A------AAGAGAACCTGCTT-T-TTGTGCAAG-TA-TTGTAG-CT-TTGATTAAAAT-AGAACTGATTAGTG-AATGCAATCGATTATG-AATTATA-CGACTTTGACGC-GTGTGTAGATTTACTA-CAGCCT---AAAACGT--GAA-TTTG-TTTTGCT-CCGTGCA--ACCG-TTTTTTGTTCAATTCAAAC---CATTAATT-----------G---------------TT----------CG---------CTA----AAAGT-A-----TTAAGACTA----CCTAGAAACGTGG-CA-G-ACTGTTCAAGGTCCACATTG-G--ATTGACGC-TAG-AAACATTCAG-ACCGTG----C----AA-TGACATTCCGCTGATCGGGTC-TGGA--AATGG----GG--------AAAATGGC-------------------A---TTA----GATTACTTTTAAATAGACTTggttataga
gi|20 : ----------------CTCTTT-A-A-GTGT-T--CA--CTTTTCCA-GTGTAATGGTTTTATAGAAGACG----TA----ATTT-C---------A------------T-TTA--TC---TCT--AGAT---------A----------CA-A---TGGAAATT----CA-T-TATT-TTGTGG-AA-TGTT----T---------------T-----GGGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-C-GA----ACAAC-GTT-AAAGAGGG--GGGGGGG-G-GGTGGGGGGGGGGGG----TAC-A-T
gi|5 : gaattA----ATTATA---------A------------T-TTA--TCTCTA----GCAT---------A----------CATA---GGAAAATTGGAGCA-TATATTATTGTGGGAAATGTTATATT-GTATTTGT-ATGATTTGTGCGGAAAT-AAGGACA-TA-AA---TT-----AAGATTGG-TCAAT-TT-CTGATGA-CCTGTTGA-CGAAGCTAACAGC-CTT-AAAAAA------GATAG-GAGGT---GGGCAGGGA----TAC-AATTA-CATA------TT--CAGTGATCTTCATCA-AACTTTC-TT-TTGC-GCCTTGCA---T-GTGAC-TA------AGCTG--TTA--------T-A-TCACACTT--ATT-ACT-----------ACCAGGTAT-A----ATTGT-T-CTTCATG-TT-T-TGATATTGA-TTTCT-G-----TAGT-TT--TAC-TTAGTTC---A-T------TTTTCAG-------TTTGCA-TTTaat
gi|7 : tgccaattattgtcaacctaacctcaagaaaattgcaacacaaggagattttattcttggcatttacacgttgtcattatgatgaatcaaatgaaatagaaaaaaatgtttaccccaaaatcagcgtagaaagtactattaaattcaaacaattcaaaattaacaagactattttgatttagcgagcgatttacacactgacgcttacatacattataaacgattaaggattcttgaaacaaagtcatgataaaattatactagcaactactgagttgatttctaatggatacagttttctctaaaactattgcagacttgcatttggctactcgaatggtaacttttgaaattttttgacataatcaaatcaacaaaaattaacgtaaattacaaagaatatttagtctcgtacgtactccccatctgttccggttgataaagttaaacttctattgtataaccggaagattagaaataatctatgttgaattctgtaaaatgtattttcccttttcctcatgattactattgtgccgcttttggttcataatatttccggcaaaacaactctatataattgtaaatttaacgtaatatctcctgtgattacacggctgggaggaaggttacacgtttcaacaattactagaaaggcttatgcgaagttgttcggcataattgttattcaattagaatttattcttggtattattcgatagctcttattgcgatctaattctaaaatagattcatctttatatgcgttaagacttttccagtggacatggttaagaagaagaataaatgttaagtcttcaT----T-CT-TTTGT-ATG-TT-----GGGAAT-AA---CATTA-CA---T------ATGATCTG-TCA-T-CT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAATATG--GGGGGGG-G-GGG---GGGGGGGaattt
gi|10 : tccagtccaatttgttaaccaacctcaagaaaattgcaacacaaggtttatctgcatttccacgttgtttaaatgaaattaatgaaagagaaaaaaggttttaccaaaattatcagcgtagaaagtactttaattaacaattcaaaattgccacattttgatttttagccgccgatttacacactgacgctttccatacattatgacgagtataaggatcttgaacaaaaatcatgaaacatttcactagaaactaactgatagattccaatgatagtttttcactttgcacttgctttgtatcgttatggtacatttgaaatttatgattatcaacaaaaatgacgtaaatacaaatatatttaaagtctcgtactccatcttccgggttacaataaagttgctagttaattctacaaaataattgttgtcttttcccctgattaagttccgtttgtacaaaaatatttcggcaaacaacattataaactataaatttacgtaatacttgtgattacgctggaagaaatattaagtatggaggtatgttcgggtattcattttagaatttattttggcgcgtataccaatctaatcaaaatcagatcctctttgctggctgatgtaatggtgagagaagatgttatttacattaGGGA----TAC-A-TTA-CATATTCATATT--CA-----------CA-AAACTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-ATCTA--TTAA------TTAA-TTATTT-CAGATTAAAT-----------AT------T-T----GTTGT-T--TTCATGCTT-T-T-ATATTGATTTT-T-G-----TAAT-TT--TAC-TTAGTTT---A-TCTTCAGTTT--GA-------TTT--A-TTTCT-GTTTT----AATGACTATTATTGTTATGTATTA-TT-CAT-TA-A---GCAG-TAC--------AGATT-ACTG---CAG-CAAGATAT-TTT---TTCC--ACA-CATA------TA-TGTACA-T-T------TATAC-TCATTGGAAATATTTC-TATAGT-AGTGGCTGTG-TAA-TCCG-ACAATTCGTG-CTTGA--AAGGTC---GCCAAATTCAA-AGTCAG-AAC-TTTACATTACATT--GTATGTACCTAT-AC-CACCGTGTT-ATA-AAG--GG--TA--------------AA--A------AAGAGAACCTAATTGT-TT---C-AGTTACTTGC-TACTGT---TTAA---------TGA--A-TC-TA---AA-CGCTTATG-A--TATACCGACTTTGACGA-GTGC-TAGATCTACTA-
gi|13 : ggATTCC-AATAGT-AGTGGCTGTG-TAA-TCCA-GCAATTCGTG-CTTGA--AATGTC---GTGAAATTCAA-TTTCAA-AAC-TTTACA-TA---------TGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AA--A------AAGAGAACCTAATG-T-TT---C-AG-TA-TTGT-A-CG-T---T-AAAAT-A-AACAGATTA-TG-AAT-CAA-CGATTATG-A--TATACCAACTTTGACGA-GTGC-TAGATTTACTT-CA-CCT---AAAATGTCGG-A-TTCG-TATCGCT-CCGTGCA-GACTG-TTTTTCGTTCAGTGCAAAC---CATTCATT-----------G---------------TTTAAACCAGACCGTTTGCCCTTC-AGTGCAAAAT-A-----TTAAGG-TACGGCCCAAGaaggttatgaccctagaaacgtggcattactgtt
gi|22 : GATTATG-A--GATACC----CTGAAGC-GTGC-TA------TTA-TA-CCTTCAAAT---C--G-G-TACG-TTT-GAT-TCATGGA-AATTG-TTCATTGTTCAGTGCAAAC---CGTT--TC-----------A---------------T------------A---------C-A----AAAATCA-----TT----------TCCT--AAATCT-G-CA-G-ATCGTTTAA--
gi|9 : -TATGACCCTAGAAACGT-GGCA-TTACTGTTCAA--TCCACAT---G--GTT-AC-C-TAG-GAACATTCAG-AC--CG----CTCGCAA-T-ACATTCCGCT-ATCGGGCCGTGAACGAATGG----C----------------CTTAGAATTC-AAAA--AATA---TTTTAG-AATTACTTTTGGATAGACTTTTGCAg
gi|8 : tCGCT-ATCGGGTC-TGGA--AATGG----AG--------GGAATGGCCTAGAATTC-AAAA-AAATA---TTTTAG-AATC--------ATAGACTTTTGCAgattaatttgaacaaaataatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttaaaaaattcaaatataaaattttagctcaaaaacgtgttcattgtctttacacagacagaaaaaaaaacagatgaatttgtagctgtcaaagcaatttgaatgtactatatatataactttatcttttcacggttcaaatattacaaacgattactttttaaaaccgtgttttcgttattcaatggatattattttcataacaaaaatgtttatcggaactatttggaggaatccatggcattctaagcaaagccacattaaaaaaaataaccatataagaaatacagtt
9 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|12 ): AAAAACCCAAAATTAATATTTAGCTCAAAAACGTGTACCATGTCCTTTAAACAGACCAGAACAAAATCAGATGCATTTTGTAGCTGATCAAAAAGAAATATTGAATGCCTCAACTCTTTTTCTATCTTTCACAGTGCAAATATACAAAACTAACTTTTAAAAATCGTGCTTCGTTATCATGGGTATTGTTTTACATAAGAACTGTTTATCGAACTATTCTTAGAGGAATCCACTGGCATCTAAGCAAAGGCCAATTTATGAAAATAACCATTATTAAAAGAAACAACAGTTTAACTTGCCACAAAAAACACCGCCGTAGCCAATTGGAGACGCTATTTTGAAAAGACG
Unaligned ( gi|15 ): AGAACAAAACCAGATATGCATTTGTTAGCTGTCAAAGCAATTGAATGTCCTCTATTACTTTTTCTATCTTTCACAGTGCAAATATTACAAACGATACCTTTTATAAAATTCATGTTTCGTTATTCAATGTGTATTTGTTTTCAATAAAAAAATTGTTTAATCTGAACCTATTAGAGGAATCCATGGCATTCTAAGCCAAAGCCCACATTATAAAAATTAACCATATTTAACTTGTCAACAGAATTAAGATGCCAAAAACTCCGTAGCCATGCAATGGAGACGTATGAAGAGAT
Unaligned ( gi|16 ): AACAAAAACAGATACATTTTTAGCTGTCAAAGCAATTTGAAATGTCCCTCAACTACTTTTTCTATCTTTCACAGTGCAAATATACAAACGATACTTTTAATAAATCGTGTTTCGTTAATCAATGGGTATTGTTTTCAAAAGAAATGTTTATCGGAACTATTTGGAGGAATCCATGGCATTCTAAGCAAAGCCCACATTTATAAAAATAACCATATTAAAGAAACGACAGTTTTAACTTGCCACAGAAGATGCAAAAATCGCCGTAGCCAATGGAGACGTATGAAAAGATG
Unaligned ( gi|18 ): AGCTGTCAAAGGCAATATTGACCTTCTCTACTACTTTGTTCTATCTTCACAGTGCAAATATACAAAACGATTACTTTTTAATAATCATGATGTTCGTTACAGGTATTGTTTTCATAAAAAAATAGTATCTGAACTAATGAAATCAGAGGAATCCGATGGCCATTCTAAGCAAAACGCCCACATTTTATAACAATTAACCATATTTTAACTTGCCAACCCAGAAATCTTCGAAGCCATGCAATGGAGCACGTTTATGAAA
Unaligned ( gi|21 ): AGACAGAACAAAAGCAGACATGCATTTGGATGCTGTCAAAAGGCAACTTTGAATGTCGCTCTGTAAAACTTTTTCTATCTATTTCACAGTGCCAAAATATTATTAACGATACTTTTTGAAATCTTGTTTCGTGTATTCAATGGGTATTGTTTTCTTTAAAAAAAAA
Unaligned ( gi|23 ): ACAAAAGGGGGGGGGGGGGGGGGGGGCACAGTAAATTAAATTACCAGCCTAGGGTTTCTTTTGCTACAGTGACCCAGGATAATTAACTTATGGAATCTCGTTACTTCCACTGAGGTAATTCTTGTTC
Unaligned ( gi|24 ): ACACAATCTAGTTTAAATCAGATCCTCTCTTGCCATTATACTACCTTCTCCAGTGTAATGGTAAGAGAAGATCTGATTAAAATTAGATTGTATACTTACAA
Unaligned ( gi|25 ): TGTAAAATTTAATTAAAGTGAAGATTTTCTCAACCTTAACGGTTGCACTTCTCCAGTGCAACGGTAAGAGAAGCTGATTTTAATTA
Unaligned ( gi|26 ): AGATCTTCTGTAACCTTTACACTAGTTCCCCAGTGTTATGGTTAGAGAAGACCTGGCTTTAATTACATGTACCTATGTACATTG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111
lowQualScore : 11111 1111 111111 11 11 11 11 11 111111 11 111111 1 111 222222222 1 1 222222 2 222222 22222 22222222 6666666666666666666666666666666666 11111 222222222222222 11111 22222222 11111 111111 00000000000000000000000000000000000000000000000000000 33333333333333 11 11 1111111 111 11 222222222222222 111 1 8888888888888888888888888888888 11 111111111111111111111111111111111111111111111111 222 2222222222 1111 44444444444444444 11 1111 333333 1 1 11 1111 1111 1111 44444444444 1111111 11111 111111 111111 11 66666666666666666666666 11 1111111 111 111111 2222222 11111 3333333333 111 333333333333 1 444444444444 3333333333 111 1 5555555555555 444444444444444444444444 111 1 11111 111 22222222222222222222222222222222 22222222222222222222222222222222222222222222222222222222 33333 11 1 111 11 1111 1111 33333333 1 111 2222222
lowQualScore : 5 5 66 5 5 4 4 4 4 11111 66 9999 4 4 4 66 8 4 4 4 4 66 9999 4 4 4 777 4 444444 4 00 4 4 55 66 4 8 22 4 66 00 66 4 88888 9999 4 66 66 4 00 4 4 4 4 4 00 4 1 4 4 4 222222 5 5 11 5 5 66 5 66 5 88 444444 2 5 0 888 66 5 66 5 5 5 888 0 555 5 5 77 5 5 77 5 444444444 1 3 9 99 1 555555 6 6 99 3 000000 99 99999 55555555 99 6 99 6 1111111111111111111111111111111111 66666 111111111111111 5 77777 5 5 5 77777777 5 5 5 5 77 5 1 44444 5 5 666666 5 99999999999999999999999999999999999999999999999999999 77777777777777 888 0 33 11 0 5 5 666 99 888 66 5 5 5 5 6666666 5 5 888 66 11 5 111111111111111 333 0 4 4 7 2 1 3333333333333333333333333333333 22 4 4 77 8888 4 55 4 777777777777777777777777777777777777777777777777 333 5 5555555555 5 888 1111 5 5 5 0 44444444444444444 5 11 5 0000 5 888 5 5 888 111111 0 5 5 5 5 11 66 5 0000 5 4 4 7777 9 4 4 3333 3333 555 5 888 66 66666666666 5 9999999 5 5 5 5 55 33333 5 555555 66 999999 5 11 5 0 888 55555555555555555555555 5 11 3 999 22 5 5555555 5 77 5 000 666666 1 8888888 6 6 6 5 66666 5555555555 6 6 6 6 111 6 222222222222 6 3 6 1 99 99 222222222222 0000000000 6 5 5 5 5 5 22 5 77 000 0 5 5 5 7777777777777 1 5 5 5 77 77 333333333333333333333333 5 5 5 000 1 5 55555 222 5 5 66 5 77 5 3 5 66 5 5 55555555555555555555555555555555 1 5 6 5 5 5 5 5 11111111111111111111111111111111111111111111111111111111 6 77777 3 33 1 0 3 6 888 0 11 0 999 3333 1 8 8 8 8 5555 8 8 8 6 3 3 55555555 3 6 5 7 111 6 2222222
lowQualScore : . . .. . . . . . . ..... .. .... . . . .. . . . . . .. .... . . . ... . ...... . .. . . .. .. . . .. . .. .. .. . ..... .... . .. .. . .. . . . . . .. . . . . . ...... . . .. . . .. . .. . .. ...... . . . ... .. . .. . . . ... . ... . . .. . . .. . ......... . . . .. . ...... . . .. . ...... .. ..... ........ .. . .. . .................................. ..... ............... . ..... . . . ........ . . . . .. . . ..... . . ...... . ..................................................... .............. ... . .. .. . . . ... .. ... .. . . . . ....... . . ... .. .. . ............... ... . . . . . . ............................... .. . . .. .... . .. . ................................................ ... . .......... . ... .... . . . . ................. . .. . .... . ... . . ... ...... . . . . . .. .. . .... . . . .... . . . .... .... ... . ... .. ........... . ....... . . . . .. ..... . ...... .. ...... . .. . . ... ....................... . .. . ... .. . ....... . .. . ... ...... . ....... . . . . ..... .......... . . . . ... . ............ . . . . .. .. ............ .......... . . . . . . .. . .. ... . . . . ............. . . . . .. .. ........................ . . . ... . . ..... ... . . .. . .. . . . .. . . ................................ . . . . . . . . ........................................................ . ..... . .. . . . . ... . .. . ... .... . . . . . .... . . . . . . ........ . . . . ... . .......
lowQualScore : 0 0 99 0 0 4 4 4 4 11111 11 4444 4 4 4 11 9 4 4 4 4 11 7777 4 4 4 888 4 111111 4 66 4 4 66 11 4 9 22 4 11 66 11 4 66666 4444 4 11 11 4 66 4 4 4 4 4 66 4 1 4 4 4 888888 0 0 99 0 0 99 0 99 0 22 444444 0 0 1 888 99 0 99 0 0 0 888 0 777 7 7 99 7 7 99 7 777777777 4 2 5 22 7 888888 7 7 22 3 777777 22 88888 33333333 22 7 22 7 0000000000000000000000000000000000 00000 888888888888888 7 33333 7 7 7 66666666 7 7 7 7 99 7 7 33333 7 7 444444 7 77777777777777777777777777777777777777777777777777777 11111111111111 000 7 66 99 1 0 0 111 55 888 99 0 0 0 0 2222222 0 0 888 99 99 0 000000000000000 888 0 4 4 2 9 8 7777777777777777777777777777777 99 0 0 22 5555 0 55 0 666666666666666666666666666666666666666666666666 444 0 9999999999 0 888 0000 0 0 0 1 44444444444444444 0 99 0 6666 0 888 0 0 888 999999 0 0 0 0 0 99 99 0 6666 0 4 4 1111 9 4 4 9999 9999 333 0 888 99 99999999999 0 5555555 0 0 0 0 11 99999 0 444444 99 444444 0 99 0 4 888 66666666666666666666666 0 99 0 444 66 7 7777777 7 99 7 000 444444 0 3333333 7 7 7 7 77777 0000000000 7 7 7 7 777 7 777777777777 7 3 7 7 22 88 555555555555 7777777777 7 7 7 7 7 7 99 7 99 000 1 7 7 7 9999999999999 4 7 7 7 99 99 666666666666666666666666 7 7 7 000 4 7 99999 999 7 7 77 7 99 7 1 0 99 0 0 55555555555555555555555555555555 7 7 6 7 7 7 0 7 66666666666666666666666666666666666666666666666666666666 7 00000 7 66 7 7 3 7 333 8 00 8 444 0000 0 0 0 0 0 4444 0 0 0 7 2 3 88888888 3 7 7 5 777 7 0000000
consensus : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACA-T------TAT-GAC-GAG--T-AA-GATT--C-TT--GAA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCCAA-TG---ATAG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCG-------T-ATGGT-ACATTTGAAA-TTT--ATGATTT------ATCAAC-AAAAA-TGA--CG-TAA----ATTACAAAG-ATATTT--AGTCTCG-AC--GTACT--CCA-TC--TTCC-GGTTACAATAAAGTT--ACTA---CTAGTG------------------AAT--T--CTA---T-AAAT------AAATGT-TTT---C-TTTTCC-CC-TGA-TTAA-TA----GCTCCTTTT-G-TAC-AAAATATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------G-----TA-----------------C-------TT------------GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTA---T--TT--GG-ATTATT-C-GG-A--------TAGCT---C-TA-TA-CGATCTAA-TCT-AA-----------A--C---G--A--TCCTCTTT-NA-GCGT-T-ACACT----TTT-CC--AGTG-TAAT--------------------CA----ATTA-GA---------------TTTATC-GTAG-AT---------ACA-A---TGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-AT-GTATCTA--TTAA------TTA-TT--AT-TTTATTACT---AC-----G----------TA----TTTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TG-AAT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATT---------------G---------------TT----------CG-----CCCT-TCAGTGCAAAATA---T-TTAAGG--TACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
Reference ( family-546 ) : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACA-T------TAT-GAC-GAG--T-AA-GATT--C-TT--GAA-AC-AAAAGT------CGTGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCCAA-TG---ACAG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCG-------T-ATGGT-ACATTTGAAATTTT--ATGATTT------ATCAAC-AAAAA-TGA--CGCTAA----ATTACAAAG-ATATTT-AAGTCTCG-AC--GTACT--CCA-TC--TTCC-GGTTACAATAAAGTT--ACTA---CTAGTG------------------AAT--T--CTA---T-AAAT------AAATGT-TTT---C-TTTTCC-CC-TGA-TTAA-TA----GCTCCTTTT-G-TAC-AAAATATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------G-----TA-----------------C-------TT------------GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTA---T--TT--GG-ATTATT-C-GG-A--------TAGCT---C-TA-TA-CGATCTAAATCT-AA-----------A--C---G--G--TCCTCTTT-NA-GCGT-T-ACACT----TTT-CC--AGTG-TAAT--------------------CA----ATTA-GA---------------TTTATC-ATAG-AT---------NCA-A---TGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-AT-G-ATCTA--TTAA------TTA-TT--AT-TTTATTACT---AC-----G----------TA----NTTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAATGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TG-NAT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATT---------------G---------------TT----------CG-----CCC--TCAGTGCAAAATA---TTTTAAGG--TACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGNG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTGGATAGACTTTTGCA
gi|1 : -C-AATT--TGTCA-ACC-AACCTCAAAGAACAATTGGCAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-CCGTGT--AT-T--TAT-AATG-AAAATTA-T---GAA-ACT-A--AAACAAATG--GCGTACCAAAATT-AGC-CGC---T-AGAA-TTACC-TACTAA-TT--AAC--AATTCAAACGAT-TA--AGCCA----CT-TCTTGA--TTT--AG-CG--CGATT-AC-A-CCAC-TGGACGC--T-TCCAAT-ACA-TGCCCCATAT-GAC-GAG--TCAA-GATT--CCTT--GAA-ACAAAAAGT------CGTG--AAAATTTTACTAGCACA---TAAC--TGGA--T-GG--TCCAA-TG---ATAA-TTTCTCT---ACT-TTA-C--ACTTACC-TTTG--TA-TCGTATACAAT-ATGGT-ACATTGAAAATTTTAGATGATTTC-----ATCAAC-AAAAA-TGACCCGCTAAATTTATTACAAAG-ATAC----AGTCT----C--ATACT--CCA-TC--TTCC-GGTTACAATAAA-TT--ACTA---GTA-TA------------------AAT--T--TTA---T-AAA-------AAATGT-TTT---CTTTTTCC-CC-TGA-TT---------GCTCCTTCT-G-TAC-AAAATATTT-CGGCGC-AAACAAGCAATC-TAT------TTTA-AATT------G-----TA-----------------C-------TTAA----------GTAAT------G-------CTGGAAGATCGGGGTC-CACGATTTC-AA-A-T-TG--TAG---GG--TCATG-AAGGTCTG-TA-TTG-------G-TATTCATTTTAGAAT-ATAGTTC--TT--GG-ATTATCGT-GG-A--------T-GCTC--C-TA-TA-C-ATTTAA--TT-AA-----------AATC---A--GAATCCTCTTTCAA-GCGT-T-ACACT----TTT-CC--AGTG--AAC--------------------TACATGGTTA-GAGAAACAGAATGTTATTTCATA-GTAG-ATTAGCTAGGGTTA-AACGTGGAAATTG---CA-T-TATT-TTGTGG--AATG--------CT-TTTGTGATG--TT-T----GGAAT-AA---CA-TACCATACT------ATGATCTGATCA-T-TTCTTG-TG--CCT--TGACCGAA----ACAATGGTT-AAAAGGATAACGAGATGGCT-GAC---GGGGGGGGAC---TAC---TTA-CAT---ATT--CA-----------TA-ATC------TTTC-TTCT-GCGGC-TGGCACTGT-GCGAA-TAC-TG-G-ATCTATTTTAAAATATGTCA-TT--AT-TTTATTACT---AC-----GCGCTTATAATTA----TTTGTCT--CTTCATGCTTATATGTTATTGATTT-TCGTAAGCTAGTATT--TAC-TTAGTTTCTAAT------TTTCA-------GTT-ATTTTCTGGTCTTTACAA-----ATGA--ATA---TATTATTT-CATATATA---GCAGTTACA------------AC-ATCTGCAGACAAGATACTTTTATTTC--ACACATAA------CAT-TGTATG-TAT--ATGCTCAAC-TCATTGAAAA-A-TCC-TATAGT-AGTGGGT-TG-TGA-TACGCGCA----GTG---TGA--AAAGTC---GC-AAACT-----TTCAA-AACTTATACAA-AA----AT--TA------TAC-ACTCACCATGTT-ATACAAGCAGG--T---------------AAAC-----AAGAAGAACCTAATT-TCTT---CAAGTATTGTA-CTAT---TGAAAATAA-AACTGATT-A-TGAGAT-C--AA-CG--TGTGAA--TATACCGACTTTGACGCGGTGC-TAGA--TA------------AA-A--GT----G-A-TTCG-TTT-GCTCCCGTGCAGGACCG---TTTCGTTCAA-GC-TATCA-TTCATTAGTTTAAACCAAACCA---------------TT----------CG-----CCCTTTCAGTGCAAAATA---CTTTTAAG--TACGG-CCTATAAACGT-G-CA-G--CTGTTC----TCC-CATCG-GAAA-TAAC-C-TAGAAAACAGTCAG-ACCGCC--GCCAATT-ACATTCCGCT-ATCAG---TGGAAATGGCGGGCACTCAGGGATGGC-TTAGAATTC-AAACAAATTATTTTTATAGAAATTA
gi|10 : tcGGGGGA----TAC-A-TTA-CAT---ATT--CATATTCA-----CA-AAA------CTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-AT-G-ATCTA--TTAA------TTAATT--AT-TTCAG-ATT---AA-----A----------TA----TTTGT-TGTTTTCATGCTT-T-T-ATATTGATTT-TTG-----TAAT-TT--TAC-TTAGTTT---ATCTTCAGTTTGA-------TTT-A-TTTCT-GTTTTAATGACTATTATTGTTATG---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------ATTACTG-CAG-CAAGATATTTT--TTCCA--CACAT-A------TAT--GTACA-T-----T--TATAC-TCATTGGAAATATTTC-TATAGT-AGTGGCTGTG-TAA-TCCG-ACAATTCGTG-CTTGA--AAGGTC---GCCAAATTCAA-AGTCAG-AACTT-TAC-ATTAC---ATTGTATGTACCTAT-AC-CACCGTGTT-ATA-AAG--GG--TA--------------AAA------AAG-AGAACCTAATTGT-TT---C-AGT----TA-CT-TG--CT---------ACTGTTTAA-TG-AAT-CTAAA-CGCTTATG-A--TATACCGACTTTGACGA-GTGC-TAGATCTACTA-tcatactttctgcacgataattgaacaaaataat
gi|10 : AGTGCTAGATC---TACTAAAGGTTATGACCCTAGAAACGTGG-CATT-ACTGTTaaggttatgaccctagaaacgtggcattactgtt
gi|11 : gggggatacattacatattcatattcacaaaacttctttgcgcttgcatgtgactacatgatctattaattaattatttcagattaaatatttgttgttttcatgcttttatattgatttttgtaattttacttagtttatcttcagtttgatttatttctgttttaatgactattattgttatgtattattcattaagcagtacagattactgcagcaagatattttttccacacatatatgtacatttatactcattggaaatatttctatagtagtggctgtgtaatccgacaattcgtgcttgaaaggtcgccaaattcaaagtcagaactttacattacattgtatgtacctataccaccgtgttataaagggtaaaaaagagaacctaattgtttcagttacttgctactgtttaatgaatctaaacgcttatgatataccgactttgacgGT-C-AATT--TATCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AG------T-TA-T-CT--GCCATTTAGCACC-GT-T--GTCC--TATAAATG-ACATTAA-T---GAA-A---A--TAA-AAATG--TT-TACCAAAAAT-ATCAAGCG--T-AGAAAGTACT-T--TAA-TT--AACA-AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT---T-CG--CG-CTTAC-ATC-ACTTG-ACGC--T-TCCA-TAACA-T------TAT-GAC-GAG--T-AA-GATT--C-TT--GAA-AC--AAAGT------CATGA-AAAATTTCACTAGCAAC---TAACGTT-GA--T-GA-TTCCAA-TG----TAG-TTACTCT---ACT-TTGCC--ACTTG-C-TTTG--TG-TCG-------T-ATGG--ACATT
gi|13 : ATTCC-AATAGT-AGTGGCTGTG-TAA-TCCA-GCAATTCGTG-CTTGA--AATGTC---GTGAAATTCAA-TTTCAA-AACTT-TAC-A-----------TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATG-T-TT---C-AGTATTGTA-C--G---TTAAAAT-A-AACAGATT-A-TG-AAT-C--AA-CGATTATG-A--TATACCAACTTTGACGA-GTGC-TAGATTTACTT-CA-CCT--AA-A--ATGTCGG-A-TTCG-TATCGCT-CCGTGCA-GACTG-TTTTTCGTTCAGTGCAAACCA-TTCATT---------------G---------------TTTAAACCAGACCGTTTGCCCT--TCAGTGCAAAATA-----TTAAGG--TACGGCCCAAGatcataaaatcattaaacaatcataataagtttaattaacaattaagaaaactaaattcatgaaaattgtttaa
gi|14 : CCAGTTC-TAAT--TGTCATACC-A-CCTCAA-GAA-AATTG-CAATCACTTTTTAGTAGG----TTGTA-T-CT--C-CATTTA-CA-C-GT-TTCGT----TAT-AATG-AAATTAAAT---GAA-A-TGA--AAA-AAATG--TT--ACCAAAAATTATC-AGCGCGT-AGAAAGTACT-T--TAA-TT--AACAAAATTCAAA--ATGTACTC--CA----CA-TTTTGA--TTTTAAG-CG--CGATTTACAA-C-AC-TG-GCGC--T-T-CA-T-ATG-T------TAT-GACTAAGT-T-AA-GATT--C-TT--GAA-GA-AATAGTACATGACATGA-AACATTTCACTAGCAACTAATAAC--T-GC--T-GA-TTCCAA-TG---ACAG-TTT
gi|17 : t------AAATAT-TTC---A-TTTTCC-CC-GGA-TTAA-TC----GCTCCATTT-T-TAC-AAAATATTT-CG--GC-AAACTG-----C-T-T------TAGA-AATT------G-----TAGATTTACGTAATA----C-------TT------------GTGATTA----GTAATACACTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAA---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTAT--T--TT--GA-ATTATT-C-GG-ATATCCATCTAGCT---C-TA-TA-CAATCTAA--TT-AA-----------AATCA--G--A--TTCTCTTT-CA-GCGT-T-ACATT----TTT-CC--AGTG-TAAT--------------------
gi|19 : CCAGT-C-AATT--TGTCA-CAA-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-A--TAT-AATG-AAATTAA-T---GAA-A-T-AATAAA-AAATGT-TT-TACCAAAAAT-ATC-AGCG--T-AG-AAGTACT-T--TAA-TT--AAC--AATTCAAA--A--TA--A--CA----CATTTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-T---CGCAATATACA-T-ACA-G------TAggttataga
gi|2 : tCCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-C---G-CATTTA-CA-C-GT-T--GT-A--TAT-AATGGAAATTAA-TTTTGAATA-A-A--AAA-AAATG--TT-TACCAAAAAT-AT--AGCG--TTAGAAAGTACT-TCTTAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACA-T------TAT-GAC-GAG--T-AA-GATTTTC-TT--GAA-AC-AAA-GT------CGTGA-AAAATTTTACTA-CAAC---TAAC--T-GA--T-GG-TTCCAAATG---ATAAATTTCTCT---ACT-TTG-C--ACTTA-C-TTT---TA-TCG-------TTATGGTTACATTTGAA---TT--ATGATT-------ATCAA--AAAAA-TGA--CG-TAA----AT-ACAAAG-ATA-----AGGCTCA-GCTCATACT--CCA-TC--TTCC-GGTTACAATAAAGTT--ACT-------GTG------------------AAT--TTTCTA---T-AA-T------AAATTG-TTT---C-TTTTCC-CC-TGA-TTAA-T-----TCTCCTTTT-GATAA-AATATATTT-CA--GC-AAACAA-----C-T-T------TTTT-A-TT------G-----TC-----------------C-------TTTACGTAATACATGTGATTATT--G-------CTGGAAGA--AGGGT--CACG--T-C-AA-A-A-T---TTG---GG--T-ATG-GAAGTCTG-TTTCGG-------G-TATTCATTTTAGAAT-ATA---T--TTT-GG-ATTATT-CCGG-A--------TAGCT---C-TA-TA-CAATCTAA--TT-AA-----------A--TCAGG--A--TCCTCTTT-AA-GCGT-T-ACACT----TTTTCC--AGTG-TAATGGTTAGAGAAGATGTTATTTCT----ATTAAGA---------------TTTAGC--TAG-GT---------ACA-A---TGGAAATTG---CATT-TATT-TTGTGG-AAA--TT----T-CTATTTGT-ATT--TT-G----GGAAT-A-----A-TA-CA---T------ATGATCTGTTCATT-TT-TTG-TG--CCT--TGA-CGAA----ACAAT-GTT-AAAA-GAAG--GGGG-GG-G-GGG---GGGGGGGGGAGATTAC-A-TTA-CAT---ATT--CA-----------TA-AAC------TTTCTTT-T-GC-GC-TTGCA---TCGTGAC-TAC-ATGG-ATCTA--TTAA------TTA--T--AT-TTTATTACT---ACAT---G----------TAATATTTTGT-T--CTTCATGATT-T-TGTTATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTCAGTTTGATTTT-A-TTTCT-GTTTTAATGA-----AT----ATAAGGTATTA-TT-TAA-T--A---CCAG-TACGGGGGAAAAAACAAT-TTTTGCAG-CAAGATATTTT--TTTCC-ACACAT-ATTGCTGCAT-TGTATACTGTACATG-TATACTTCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-G-----CGTGTTTTGA--AAGGTC---GC------CAA-ATT-AA-AACTA-TAC-A-------------------TAT-ACTCACCGTGTT-ATA-AAG--GGTTT---------------AAAAATTTTAAG-AGAA-CTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT---AACTGATT-A-TG-A-------------TAT-------TACCGCTTTTGATGC-GTGC-TAGG---A---------T--AA-A--GT----G-ATTTCGTTTTCGCT-CCTTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATT---------------GTTTAAACCAAACCATTT----------CG-----CCCT-TCAGTGCAAAACATTTTTTTAA-G--TACGGCCCTAGAAACGT-G-CAGG-ACTGTTCAA--TCCACATCGTG--A-TAAC-CGTAG-AAACATTCAGAACCG-C--G-CAA-T-ACATT-CGCT-ATCGGGTC-GGAAATGGAGCTA-----GGAAAGGT-GTAGAATTCAAAAAAAAATATTT---TAG-AATTA-------AAAAACTTTTGCAaa
gi|20 : --TTCTCTTT-AA-GTGT-T--CACT----TTT-CC--AGTG-TAATGGTTTTATAGAAGACG----TA----ATTT-CA---------------TTTATCTCTAG-AT---------ACA-A---TGGAAATT----CA-T-TATT-TTGTGG--AATGTT--------------------TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CG-A----ACAAC-GTT-AAAG-AGGG--GGGGGGG-G-GGTGGGGGGGGGGGG----TAC-A-Tgataa
gi|22 : gaaGATTATG-A--GATACC----CTGAAGC-GTGC-TA------TTA-TA-CCTTCAA-A--TC----G-G-TACG-TTT-GAT-TCATGGA-AATTG-TTCATTGTTCAGTGCAAACCGTTTCATaat
gi|23 : -AAAA-G--G--GGGG-GG-G-GG----GGGGGGGGG----CAC-A-GTA-AATTAAATT---A-----------CC-AGCCTAGGGTTTC-TT-T--T-GC--TACA-----GTGAC-C-C-AG-G-ATA-A--TTAAC-----TTA-TGGAAT-CTCGTTACTTCCACTGAG-G----------TA----ATTCT-T--GTTCacaaaaatcatttcctaaatctgcagatcgtttaag
gi|24 : acA-CA-CAATCTAG-TTT-AA-----------A--TCA-G--A--TCCTCTCT-TG-CCAT-T-ATACTACCTTCT-CC--AGTG-TAAT--------------------
gi|3 : CCAGT-C-AATT--TGTCA-ATC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTCGA--TTT--AG-CA--TGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACA-T------TAT-GAC-GAG--T-AA-GATT--C-TT--GAA-AC-AAAAGT------CATGA-AAAATTTCCCTAGCAAC---TAAC--T-GA--T-AA-TTCCAG-TG---ATAG-TTTCTCT---ACT-TTG-C--ACTTG-A-TTTG--TA-TCG-------T-ATGGT-ACATTTGAAA-TTT--ATGATTT------ATCAAC-AAAAA-TGA--CG-TAA----A-TGCAAAG-ATATTT--AGTCTCGTAC--GTACT--CCA-TC--TTCC-GGTTACAATAAAGTT--ACTAGGCCTAGTG------------------AAT--T--CTA---T-GAAT------AAATGT-TTT---C-TTTTCC-CT-TGA-TTAA-TA----GTTCCTTTT-G-AAC-ATAATATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------G-----TA-----------------C-------TT------------GTGAC------G-------CTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTATAAT-TTA---T--TT--GG-ATTATT-C-GG-A--------TAGCT---C-TA-TA-TGAT---AGTCT-AA-------------------------CCTCTTT-CA-GCGT-T-ACATT----TTC-CC--AGTG-TAAT--------------------CA----ATTA-GA---------------TTTATC-A-AG-AT---------TCA-A---TGGAAATTA---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATGA-TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CAAA----ACAAC-GTT-AAAC-GATG--GGGGTGG-G-GGT---GGGGTGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-AC-TTGCA---T-GTGAC-TAC-AT-GTATTTA--TTAA------TTA-TC--AT-TCTATTACT---AT----------------TA----CTTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTAA-------TTT-A-TTTCT-GTTTTAATGA-----AT----AT----CATTA-TT-CAT-TA-A---GCAG-TACAA-----------AT-ATTT-CAG-CAAGATATTTT--TCCAA-ACACAT-AAT----CA--TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTTGCTGTG-TAA-TCTG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTA-TAC-A-TAC---ATG-TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AGG-AGAACCTAATT-T-TT---C-AGTATTGTT-CT-T---TTAAAAT-A-AACTGATT-A-TG-TAT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AATAC-GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTAATT---------------G---------------TT----------CG-----------CA----AAAATA-----TTAAGG--TACGGCCCTAGAAACGT-G-CA-G-ATTGTTCAA--TCCACATTG-G--A-TTAC-C-TAG-AAACATTCAG-AC---T--G-CAA-T-ACATTCCGCT-ATTGGGTCTGAAAATGGAG--------GAAATTGC-TTAGAATTC-AAAAGAAATATTA---TAG-AATTACTTTTAGATAGACTTTTGCAggtaagagaagatctgattaaaattagattgtatacttacaa
gi|4 : CCTCA--GAA-AATTG-CAA-CAC-----A--AGT----TT-TACT-CT--GGCATTTA-CA-C-GT-T--GTTC--TAT-AATG-AATTAAA-T---GAA-A-T-A--A----------------------T-AT--AGTG--T-AGAAAGTCCCCT--TAA-TT--AAC--AATTCAAA--AT-TG--A--CA-----A-TTTTGA--TTT--AT-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACATT------TAT-GAC-GTG--T-AA-GATT--C-TTGCGAATAC-AAAAGT------CATGA-AAAATTTCACTAGCA------AAC--T-GA--T-GA-TTCCAA-TG---ACAG-TTTCTCTG--ACT-TTT-G--ACTTG-C-TTTG--TA-T-G-------T-AAGGT-ACATT--AAA-TGT--ATGATTT------ATCAACAAAAAA-AGA--CGCTAA----A-TACAAA--ATATTG-AAGTCTCG-AC---TACT--CCATTC--TTCC-GGTTAGAA-AAAGT----CTA---T--GTG------------------AAT--TA-CTA---T--AAT-------AATGT-TTT---TATTTTCCGCC-TGATTTAATTG----GCTTCTTTT-G-TAC-AAAATATTT-CG--GC-AAAC-G-----C-T-T------TATC-AACT------GTAATTTA-----------------CGTTATAATT------------GTGATTA----G-------CTGGAAGA--GGG----CACG--TTCAAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTGTTT-CGG-------G-TATTCATTTTCGAAT-TTAT--T--TT--GG-ATTATT-C--G-A--------TAGCT---C-TA-TA-CAATCTAA--TT-AA-----------AT-C---AATA--TCGTCTTT-AA-GCGT-T--CATT----TTT-CC--A-TGTTAATGGTTAGATAAGATGTTATTGCA----ATTA-GA---------------TTTGTC--TAG-AT----------CA-A---TGGACATTG---CC-T-TGTT-TAGTGG-GA--------------------ATG--TT-G----GGAATAAA---AA-TA-CA---TAAACAAATGGTCTG-TCATT-TT-TTG-TGGCCTT--TAA-CGAA----ACAAG-ATTAAAAA-GATG------------------CGGGGGAAA----TACAA-TTAGCAT---ATT--CATTC--------CACAAC-------TTC-GT-T-GT-GC-TTGCT---G-GTGACGTAC-AT-GTACATA--TTAA------TTA-TT--CT-TTTATTACT---ACAT---G----------TATT--TTTGT-T--CTTCATGCTT--------TTGATTT-T-G-----TAG--TT--TAT-TTAGTTC---AT------TTTTAG------TTTGA-TTTC-----------A-----AT----AT----TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATA-TTT--TTCCACACACAT-A----------TGT-CA--GT----------T-TCAATGGAAATATTCTATATATT-AGTGGCTGTGTTGA-TCC--GC-ATTCGTG-CTTGA--AAGGT----GCAAAATTCAAGATTCAA-AA-TT-TAC-A-TATGTTAC--TATGTACCTATAACTCACCGTCTT-ATA-A----GG--T----------------AA------AAG-AG-ATCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-A--TGATT-A-TG-AAT-C--AA-CGATTATG-A--TATACCGATTTGGACGC-GTG--TAGATC-ACTACCA-CCT---------T----G---T----TTTCGCT-CCGTGCA-GACCGATTTTTCGTTC-ATGC-AACCA-TTCATTG--------------G---------------TT----------Ct
gi|5 : GC-C-AATTATTGTCA-ACCTAACCTCAA-GAA-AATTG-CAA-CAC-----A--AGGAGATTT-TA-TTCTTGG-CATTTA-CA-C-GT-T--GT-CATTAT-GATG-AATCAAA-T---GAA-A-T-AGAAAA-AAATG--TT-TACCCCAAA--ATC-AGCG--T-AGAAAGTACTAT--TAAATTCAAAC--AATTCAAA--AT-TA--A--CAAGACTA-TTTTGA--TTT--AG-CGAGCGATTTAC-A-C-AC-TG-ACGC--T-TACA-T-ACA-T------TATAAAC-GAT--T-AAGGATT--C-TT--GAA-AC--AAAGT------CATGATAAAATTATACTAGCAAC---T-AC--T-GAGTT-GATTTCTAA-TGGATACAGTTTTCTCTAAAACTATTG-CAGACTTG-CATTTGGCTACTCG-------A-ATGGTAACTTTTGAAATTTT--TTGACATAATCAAATCAAC-AAAAATTAA--CG-TAA----ATTACAAAGAATATTT--AGTCTCGTAC--GTACTCCCCA-TCTGTTCC-GGTT--GATAAAGTTAAACTT---CTATTGTATAACCGGAAGATTAGAAATAAT--CTATGTT-GAATTCTGTAAAATGTATTTTCCC-TTTTCC-TCATGA-TTAC-TATTGTGCCGCTTTTGG-TTC-ATAATATTTCCG--GCAAAACAA-----C-T-C------TATATAATT------G-----TAAATTTAACGTAATATCTC-------CT------------GTGATTACACGG-------CTGGGAGG--AAGGTTACACGT-TTC-AACA-ATTAC-TAGAAAGGCTT-ATGCGAAGT-TG-TT-CGGCATAATTGTTATTCA-ATTAGAAT-TTA---TTCTT--GGTATTATT-C--G-A--------TAGCT---CTTATTG-CGATCTAATTCTAAA-----------A--T---A--GATTCATCTTTATATGCGT-TAAGACT----TTT-CC--AGTG-aaaacaagc
gi|5 : tA----ATTATAA---------------TTTATCTCTAGCAT---------ACATA---GGAAAATTGGAGCA-TATATTATTGTGGGAAATGTTATATT-GTATTTGT-ATGATTT-GTGCGGAAAT-AAGGACA-TA-AA---TT-----AAGATTGG-TCAAT-TT-CTGATGA-CCTGTTGA-CGAAGCTAACAGC-CTT-AAAA-AA------GATAG-GAGGT---GGGCAGGGA----TAC-AATTA-CAT---ATT--CAGTGATCTTCATCA-AAC------TTTC-TT-TTGC-GCCTTGCA---T-GTGAC-TA-------AGCTG--TTA--------TA-TC--ACACTTATTACT---ACCAGGTA----------TA----ATTGT-T--CTTCATG-TT-T-TGATATTGATTTCT-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTgacatggttaagaagaagaataaatgttaagtcttcaaattataatttatctctagcatacataggaaaattggagcatatattattgtgggaaatgttatattgtatttgtatgatttgtgcggaaataaggacataaattaagattggtcaatttctgatgacctgttgacgaagctaacagccttaaaaaagataggaggtgggcagggatacaattacatattcagtgatcttcatcaaactttcttttgcgccttgcatgtgactaagctgttatatcacacttattactaccaggtataattgttcttcatgttttgatattgatttctgtagttttacttagttcatttttcagtttgcatttaattt
gi|6 : tgccaattattgtcaacctaacctcaagaaaattgcaacacaaggagattttattcttggcatttacacgttgtcattatgatgaatcaaatgaaatagaaaaaaatgtttaccccaaaatcagcgtagaaagtactattaaattcaaacaattcaaaattaacaagactattttgatttagcgagcgatttacacactgacgcttacatacattataaacgattaaggattcttgaaacaaagtcatgataaaattatactagcaactactgagttgatttctaatggatacagttttctctaaaactattgcagacttgcatttggctactcgaatggtaacttttgaaattttttgacataatcaaatcaacaaaaattaacgtaaattacaaagaatatttagtctcgtacgtactccccatctgttccggttgataaagttaaacttctattgtataaccggaagattagaaataatctatgttgaattctgtaaaatgtattttcccttttcctcatgattactattgtgccgcttttggttcataatatttccggcaaaacaactctatataattgtaaatttaacgtaatatctcctgtgattacacggctgggaggaaggttacacgtttcaacaattactagaaaggcttatgcgaagttgttcggcataattgttattcaattagaatttattcttggtattattcgatagctcttattgcgatctaattctaaaatagattcatctttatatgcgttaagacttttccagtggacatggttaagaagaagaataaatgttaagtcttcaACA--TTC-AA-ATG-TAAGTAG---GG--T-ATG-GCAGTCTG-TT-CGG-------G-TATTCATTTTAGAATGTTA---T--TTTCGG-ATTATT-C-GGGA--------TAGCTTTGC-TA-TA-TTAT---AATCT-AATTAAAAAAATCA--G---G--A--TACTCTTT-CA-GCGTGT-ACACT----TTT-TCGCAGTG-TAAC--------------------CA----ATT--GA---------------TTTATC-ATAG-AT---------ACA-A---TGGAAATTA---CA-T-TATT-TTG-GG-AAATTTT----TCCT-TTTGT-ATG--TTGG----GGAAT-AA---CA-TA-CA---TAATTA-ATGATATG-TCA-TGTT-GTG-TG--CCT--TGG-CAAA----ACAAT-GTT---AA-GATA--GGGGTGG-G-GGT----------------TAC-A-TTA-CAT---ATTTCCA-----------CA-TAC------------T-T-GC-A------A---T-GTGAC-TATAAT-GTATCTA--TCAA------TTA-TTC-AT-TCTATAACT---AT-----T----------GA----CTTGC-TG-CTTCATGTTT-T-CGATATTGATTT-T-G-----TAGT-TTTGTACTTTAGTTC---AT------TTTGA-------TTT-A-TTTCT-GTTTTAA-GA-----AT----AT----CATTA-TTACAT-TA-AAGGGCAG---CAG-----------AT-ATTT-CAG-CGAGGTATTTT--TTCCA-A-ACAT--------CGTATGTACA-TGT--A---TATGC-TCATTGGAAATATTCC-TATAGTAAGTTGCTGTG-TAACTCTG-GCAATTTGTG-CTTGAACAAGGTTCCGGCGGAATTCAA-ATTCAAGAACTT-TAC---------AT--TATGTACTAAT-ACTCACCGTGTTAATA-AAG--GG--TAAAAAGCTCGGGGTAAAA------AAG-AGAACCTGCTT-T-TTGTGCAAGTATTGTAGCT-TTGATTAAAAT-AGAACTGATT-AGTG-AATGC--AATCGATTATG-AATTATA-CGACTTTGACGC-GTGTGTAGATTTACTA-CAGCCT--AA-AACGT----GAA-TTTG-TTTTGCT-CCGTGCA--ACCG-TTTTTTGTTCAATTCAAACCA-TTAATT---------------G---------------TT----------CG-----C-----TA----AAAGTA-----TTAAGAC-TA----CCTAGAAACGTGG-CA-G-ACTGTTCAAGGTCCACATTG-G--ATTGACGC-TAG-AAACATTCAG-ACCG-T--G-CAA-TGACATTCCGCTGATCGGGTCTGGAAATGGGG--------AAAATGGCATTAG---------------------------ATTACTTTTAAATAGACTTtcagtttgcatttaattt
gi|7 : CCAGT-CCAATT--TGTTA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTC-CA-C-GT-T--GT-T--TA--AATG-AAATTAA-T---GAA-A-G-A--GAA-AAAAGGTTT-TACCAAAATT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TG--C--CA----CA-TTTTGATTTTT--AGCCGC-CGATTTAC-A-C-AC-TG-ACGCT-T-TCCA-T-ACA-T------TAT-GAC-GAGTAT-AA-GGAT--C-TT--G-A-AC-AAAAAT------CATGA-AACATTTCACTAGAAAC---TAAC--T-GA--TAGA-TTCCAA-TG---ATAG-TTTTTC----ACT-TTG-C--ACTTG-C-TTTG--TA-TCGT------T-ATGGT-ACATTTGAAA-TTT--ATGA-TT------ATCAAC-AAAAA-TGA--CG-TAA----A-TACAAAT-ATATTTAAAGTCT----C--GTACT--CCA-TC--TTCCGGGTTACAATAAAGT-----TG---CTAGTT------------------AAT--T--CTA---CAAAAT------AATTGT-TGT---C-TTTTCC-CC-TGA-TTA---A----GTTCCGTTT-G-TACAAAAATATTT-CG--GC-AAACAA-----CAT-TATAAACTATA-AATTTACGTAA-----TA-----------------C-------TT------------GTGATTAC---G-------CTGGAAG---------------------A-A-A-TAT-TA----AG--T-ATG-GAGGTATG-TT-CGG-------G-TATTCATTTTAGAAT-TTA---T--TT--------------------------TGGCG---CGTA-TACCAATCT-AATCA-AA-----------A--TCA-G--A--TCCTCTTT----GC--------------TGG-CT--GATG-TAAT---------------------G----GTGA-GA----------------------GAAG-AT---------GTT-A---T-----TTA---CA-T-TATT-CT----------TT----T-------GT-ATG--TT-G----GGAAT-AA---CATTA-CA---T------ATGATCTG-TCA-T-CT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-TATG--GGGGGGG-G-GGG---GGGGGGG
gi|8 : tCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-CTAGAATTC-AAAAAAA-TATTT---TAG-AATCA--------TAGACTTTTGCA
gi|9 : --TATGACCCTAGAAACGT-GGCA-TTACTGTTCAA--TCCACAT---G--G-TTAC-C-TAG-GAACATTCAG-ACCG-CTCG-CAA-T-ACATTCCGCT-ATCGGGCCGTGAAC--------------GAATGGCCTTAGAATTC-AAAA--AATATTT---TAG-AATTACTTTTGGATAGACTTTTGCAgataatttgaacaaataatgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgattaaaatataaatataaaaatttagctcaaaaccgtgcattcatcgtctattaacagacagaatcaaacactagatgacattttaatgtaagctgtcaaagcatttcgaatgtctcatattacttttttcttctttcacagtgactaaataacaaacgatacttttaaaatcatgtcgttattcaatgtgttagtatttttcaatagaaaatagttatatcttggaacatatttagaggaatgcccatgattcgtaaccaaagcaaaaccacatttataaaatataacatcatttttctaatacttgcacgaattaagatgcaaatatctccgtagccattgcaatggagaggtatgaaaagatg
7 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): AAAAACCCAAAATTAATATTTAGCTCAAAAACGTGTACCATGTCCTTTAAACAGACCAGAACAAAATCAGATGCATTTTGTAGCTGATCAAAAAGAAATATTGAATGCCTCAACTCTTTTTCTATCTTTCACAGTGCAAATATACAAAACTAACTTTTAAAAATCGTGCTTCGTTATCATGGGTATTGTTTTACATAAGAACTGTTTATCGAACTATTCTTAGAGGAATCCACTGGCATCTAAGCAAAGGCCAATTTATGAAAATAACCATTATTAAAAGAAACAACAGTTTAACTTGCCACAAAAAACACCGCCGTAGCCAATTGGAGACGCTATTTTGAAAAGACG
Unaligned ( gi|15 ): AGAACAAAACCAGATATGCATTTGTTAGCTGTCAAAGCAATTGAATGTCCTCTATTACTTTTTCTATCTTTCACAGTGCAAATATTACAAACGATACCTTTTATAAAATTCATGTTTCGTTATTCAATGTGTATTTGTTTTCAATAAAAAAATTGTTTAATCTGAACCTATTAGAGGAATCCATGGCATTCTAAGCCAAAGCCCACATTATAAAAATTAACCATATTTAACTTGTCAACAGAATTAAGATGCCAAAAACTCCGTAGCCATGCAATGGAGACGTATGAAGAGAT
Unaligned ( gi|16 ): AACAAAAACAGATACATTTTTAGCTGTCAAAGCAATTTGAAATGTCCCTCAACTACTTTTTCTATCTTTCACAGTGCAAATATACAAACGATACTTTTAATAAATCGTGTTTCGTTAATCAATGGGTATTGTTTTCAAAAGAAATGTTTATCGGAACTATTTGGAGGAATCCATGGCATTCTAAGCAAAGCCCACATTTATAAAAATAACCATATTAAAGAAACGACAGTTTTAACTTGCCACAGAAGATGCAAAAATCGCCGTAGCCAATGGAGACGTATGAAAAGATG
Unaligned ( gi|18 ): AGCTGTCAAAGGCAATATTGACCTTCTCTACTACTTTGTTCTATCTTCACAGTGCAAATATACAAAACGATTACTTTTTAATAATCATGATGTTCGTTACAGGTATTGTTTTCATAAAAAAATAGTATCTGAACTAATGAAATCAGAGGAATCCGATGGCCATTCTAAGCAAAACGCCCACATTTTATAACAATTAACCATATTTTAACTTGCCAACCCAGAAATCTTCGAAGCCATGCAATGGAGCACGTTTATGAAA
Unaligned ( gi|21 ): AGACAGAACAAAAGCAGACATGCATTTGGATGCTGTCAAAAGGCAACTTTGAATGTCGCTCTGTAAAACTTTTTCTATCTATTTCACAGTGCCAAAATATTATTAACGATACTTTTTGAAATCTTGTTTCGTGTATTCAATGGGTATTGTTTTCTTTAAAAAAAAA
Unaligned ( gi|25 ): TGTAAAATTTAATTAAAGTGAAGATTTTCTCAACCTTAACGGTTGCACTTCTCCAGTGCAACGGTAAGAGAAGCTGATTTTAATTA
Unaligned ( gi|26 ): AGATCTTCTGTAACCTTTACACTAGTTCCCCAGTGTTATGGTTAGAGAAGACCTGGCTTTAATTACATGTACCTATGTACATTG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111 1111111111111111111111111111111
lowQualScore : 11111 1111 111111 11 11 11 11 111111 111111 1 111 222222222 1 333333 222 1 1111111 1111111 333333 7777777777777777777777777777 11111 111 22222222 11111 2222222 11111 111111 00000000000000000000000000000000000000000000000000000 33333333333333 11 11 1111111 111 11 222222222222222 111 1 1111 11 555555555 111111 11 111111111111111111111111111111111111111111111111 222 22222222222222 1111 44444444444444444 11 1111 333333 1 1 11 1111 1111 1111 44444444444 1111111 11111 11 111111 11 66666666666666666666666 11 1111111 111 111111 2222222 1 11111 3333333333 111 333333333333 1 444444444444 3333333333 111 1 5555555555555 444444444444444444444444 111 1 11111 111 22222222222222222222222222222222 2222222222222222222222222222222 11111 44444444 1 111 11 1111 1111 33333333 1 111 1111111
lowQualScore : 5 5 66 5 5 4 4 4 4 11111 66 9999 4 4 4 66 8 4 4 4 4 66 9999 4 4 4 777 4 444444 4 00 4 4 55 66 4 8 22 4 66 00 66 4 88888 9999 4 22 4 66 4 4 4 4 4 4 66 4 55 4 4 4 222222 5 5 5 5 66 5 66 5 66 5 88 444444 5 0 888 66 5 66 5 5 5 888 0 555 5 5 77 5 5 77 5 444444444 1 3 000000 555 6 6 99 3 9999999 99 4444444 000000 99 6 99 6 99 4444444444444444444444444444 66666 111 4 22222222 5 77777 5 5 5 9999999 5 5 5 5 77 5 1 44444 5 5 666666 5 99999999999999999999999999999999999999999999999999999 77777777777777 77 0 33 11 0 5 5 666 99 888 66 5 5 5 5 6666666 5 5 888 66 11 5 111111111111111 333 0 4 8888 4 00 555555555 111111 4 22 4 4 77 8888 4 55 4 777777777777777777777777777777777777777777777777 333 5 99999999999999 55 1111 5 5 5 0 44444444444444444 5 11 5 0000 5 888 5 5 888 111111 0 5 5 5 5 11 66 5 0000 5 4 4 7777 9 4 4 3333 3333 555 5 888 66 66666666666 5 9999999 5 5 5 5 55 33333 5 55 11 2 66 999999 5 11 5 0 22222222222222222222222 5 33 3 999 22 5 5555555 5 77 5 000 666666 1 8888888 6 6 6 0 66666 5555555555 6 6 6 6 111 6 222222222222 6 3 6 1 99 99 222222222222 0000000000 6 5 5 5 5 5 22 5 77 000 0 5 5 5 7777777777777 1 5 5 5 77 77 333333333333333333333333 5 5 5 000 1 5 55555 222 5 5 5 5 77 5 3 5 66 5 5 55555555555555555555555555555555 1 5 6 5 5 5 5 5 1111111111111111111111111111111 44444 6 11111111 6 5 5 1 0 3 6 888 0 11 0 999 3333 1 8 8 8 8 5555 8 8 8 6 3 1 55555555 3 99 5 111 6 4444444
lowQualScore : . . .. . . . . . . ..... .. .... . . . .. . . . . . .. .... . . . ... . ...... . .. . . .. .. . . .. . .. .. .. . ..... .... . .. . .. . . . . . . .. . .. . . . ...... . . . . .. . .. . .. . .. ...... . . ... .. . .. . . . ... . ... . . .. . . .. . ......... . . ...... ... . . .. . ....... .. ....... ...... .. . .. . .. ............................ ..... ... . ........ . ..... . . . ....... . . . . .. . . ..... . . ...... . ..................................................... .............. .. . .. .. . . . ... .. ... .. . . . . ....... . . ... .. .. . ............... ... . . .... . .. ......... ...... . .. . . .. .... . .. . ................................................ ... . .............. .. .... . . . . ................. . .. . .... . ... . . ... ...... . . . . . .. .. . .... . . . .... . . . .... .... ... . ... .. ........... . ....... . . . . .. ..... . .. .. . .. ...... . .. . . ....................... . .. . ... .. . ....... . .. . ... ...... . ....... . . . . ..... .......... . . . . ... . ............ . . . . .. .. ............ .......... . . . . . . .. . .. ... . . . . ............. . . . . .. .. ........................ . . . ... . . ..... ... . . . . .. . . . .. . . ................................ . . . . . . . . ............................... ..... . ........ . . . . . . . ... . .. . ... .... . . . . . .... . . . . . . ........ . .. . ... . .......
lowQualScore : 0 0 99 0 0 4 4 4 4 11111 11 4444 4 4 4 11 9 4 4 4 4 11 7777 4 4 4 888 4 111111 4 66 4 4 66 11 4 9 22 4 11 66 11 4 66666 4444 4 22 4 11 4 4 4 4 4 4 11 4 66 4 4 4 888888 0 0 0 0 99 0 99 0 99 0 22 444444 0 1 888 99 0 99 0 0 0 888 0 777 7 7 99 7 7 99 7 777777777 4 2 888888 000 7 7 22 3 8888888 22 7777777 222222 22 7 22 7 22 2222222222222222222222222222 00000 777 2 33333333 7 33333 7 7 7 7777777 7 7 7 7 99 7 7 33333 7 7 444444 7 77777777777777777777777777777777777777777777777777777 11111111111111 99 7 66 99 1 0 0 111 55 888 99 0 0 0 0 2222222 0 0 888 99 99 0 000000000000000 888 0 4 4444 4 88 333333333 555555 0 99 0 0 22 5555 0 55 0 666666666666666666666666666666666666666666666666 111 0 88888888888888 44 0000 0 0 0 1 11111111111111111 0 99 0 6666 0 888 0 0 888 999999 0 0 0 0 0 99 99 0 6666 0 4 4 1111 9 4 4 9999 9999 333 0 888 99 99999999999 0 5555555 0 0 0 0 11 99999 0 11 11 0 99 444444 0 99 0 4 33333333333333333333333 7 66 0 444 66 7 7777777 7 99 7 000 444444 0 3333333 7 7 7 5 77777 0000000000 7 7 7 7 777 7 777777777777 7 3 7 7 22 88 555555555555 7777777777 7 7 7 7 7 7 99 7 99 000 1 7 7 7 9999999999999 4 7 7 7 99 99 666666666666666666666666 7 7 7 000 4 7 99999 999 7 7 7 7 99 7 1 0 99 0 0 55555555555555555555555555555555 7 7 6 7 7 7 0 7 8888888888888888888888888888888 22222 7 55555555 7 7 7 7 7 3 7 333 8 00 8 444 0000 0 0 0 0 0 4444 0 0 0 7 2 5 88888888 3 88 7 777 7 2222222
consensus : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACA-T------TAT-GAC-GAG-T-A--A-GATT--C-TT--GAA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCCAA-TG---ATAG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCG-------T-ATGGT-ACATTTGAAATTT------ATGATT-T-ATCAAC-AAAAA-TGA--CG-TAA----ATTACAAAG-ATATTT-A--GTCTCG-AC--GTACT--CCA-TC--TTCCGG-TTACAATAAAGTT--ACTA---CTAGTG------------------AAT--T--CTA---TAAA-T------AAATGT-TTT---C-TTTTCC-CC-TGA-TTAA-T-----GCTCCTTTT-G-TACAAAA-TATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------G-----TA-----------------C-------TT------------GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTA---T--TT--GG-ATTATT-C-GG-A--------TAGCT---C-TA-TAC---AATCTAA-TCNAAA--TCA-G--ATC------C-TCTTT-NA-GCGT-T-ACACT----TTT-CC--AGTG-TAAT--------------------CA----ATTA-GA---------------TTTATCG-TAG-AT-------------ACA-ATGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTAC---G----------TA----T--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G---------------TTCGCCC-TTCAGTGCAAAAT--A----TTTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
Reference ( family-546 ) : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACA-T------TAT-GAC-GAG-T-A--A-GATT--C-TT--GAA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCCAA-TG---ATAG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCG-------T-ATGGT-ACATTTGAAATTT------ATGATT-T-ATCAAC-AAAAA-TGA--CG-TAA----ATTACAAAG-ATATTT-A--GTCTCG-AC--GTACT--CCA-TC--TTCCGG-TTACAATAAAGTT--ACTA---CTAGTG------------------AAT--T--CTA---TAAA-T------AAATGT-TTT---C-TTTTCC-CC-TGA-TTAA-TA----GCTCCTTTT-G-TACAAAA-TATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------G-----TA-----------------C-------TT------------GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTA---T--TT--GG-ATTATT-C-GG-A--------TAGCT---C-TA-TAC---GATCTAA-TCTAAA--C---G--ATC------C-TCTTT-NA-GCGT-T-ACACT----TTT-CC--AGTG-TAAT--------------------CA----ATTA-GA---------------TTTATCG-TAG-AT-------------ACA-ATGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTAC---G----------TA----T--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATT---------------G---------------TTCGCCC-TTCAGTGCAAAAT--A----TTTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
gi|1 : -C-AATT--TGTCA-ACC-AACCTCAAAGAACAATTGGCAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-CCGTGT--AT-T--TAT-AATG-AAAATTA-T---GAA-ACT-A--AAACAAATG--GCGTACCAAAATT-AGC-CGC---T-AGAA-TTACC-TACTAA-TT--AAC--AATTCAAACGAT-TA--AGCCA----CT-TCTTGATTT--AGC-G--C-GATT-AC-A-CCAC-TGGACGC--T-T-CCAAT-ACA-TGCCCCATAT-GAC-GAG-TCA--A-GATT--CCTT--GAA-ACAAAAAGT------CGTG--AAAATTTTACTAGCACA---TAAC--TGGA--T-GG--TCCAA-TG---ATAA-TTTCTCT---ACT-TTA-C--ACTTACC-TTTG--TA-TCGTATACAAT-ATGGT-ACATTGAAAATTTTAG---ATGATT-TCATCAAC-AAAAA-TGACCCGCTAAATTTATTACAAAG-ATA--C-A--GTCT----C--ATACT--CCA-TC--TTCCGG-TTACAATAAA-TT--ACTA---GTA-TA------------------AAT--T--TTA---TAAA--------AAATGT-TTT---CTTTTTCC-CC-TGA-TT---------GCTCCTTCT-G-TACAAAA-TATTT-CGGCGC-AAACAAGCAATC-TAT------TTTA-AATT------G-----TA-----------------C-------TTAA----------GTAAT------G-------CTGGAAGATCGGGGTC-CACGATTTC-AA-A-T-TG--TAG---GG--TCATG-AAGGTCTG-TA-TTG-------G-TATTCATTTTAGAAT-ATAGTTC--TT--GG-ATTATCGT-GG-A--------T-GCTC--C-TA-TAC----ATTTAA-TTAAAA--TCAGA--ATC------C-TCTTTCAA-GCGT-T-ACACT----TTT-CC--AGTG--AAC--------------------TACATGGTTA-GAGAAACAGAATGTTATTTCATAG-TAG-ATTAGCTAGGGTTAAAC--GTGGAAATTG---CA-T-TATT-TTGTGG--AATG--------CT-TTTGTGATG--TT-T----GGAAT-AA---CA-TACCATACT------ATGATCTGATCA-T-TTCTTG-TG--CCT--TGACCGAA----ACAATGGTT-AAAAGGATAACGAGATGGCT-GAC---GGGGGGGGAC---TAC---TTA-CAT---ATT--CA-----------TA-ATC------TTTC-TTCT-GCGGC-TGGCACTGT-GCGAA-TAC--TG-GATCTATTTTAAAATATGTCA-TT--AT-TTTATTACTAC---GCGCTTATAATTA----T--TTGTCT--CTTCATGCTTATATGTTATTGATTT-TCGTAAGCTAGTATT--TAC-TTAGTTTCTAAT------TTTCA-------GTT-ATTTTCTGGTCTTTACAA-----ATGA--ATA---TATTATTT-CATATATA---GCAGTTACA------------AC-ATCTGCAGACAAGATACTTTTATTTC--ACACATAA------CAT-TGTATG-TAT--ATGCTCAAC-TCATTGAAAA-A-TCC-TATAGT-AGTGGGT-TG-TGA-TACGCGCA----GTG---TGA--AAAGTC---GC-AAACT-----TTCAA-AACTTATACAA-AA----AT--TA------TAC-ACTCACCATGTT-ATACAAGCAGG--T---------------AAAC-----AAGAAGAACCTAATT-TCTT---CAAGTATTGTA-CTAT---TGAAAATAA-AACTGATT-A-TGAGAT-C--AA-CG--TGTGAA--TATACCGACTTTGACGCGGTGC-TAGA--TA------------AA-A--GT----G-A-TTCG-TTT-GCTCCCGTGCAGGACCG---TTTCGTTCAA-GC-TATCA-TTCATTAGTTTAAACCAAACCA---------------TTCGCCCTTTCAGTGCAAAAT--ACT--TTTAA-G-T-ACGG-CCTATAAACGT-G-CA-G--CTGTTC----TCC-CATCG-GAAA-TAAC-C-TAGAAAACAGTCAG-ACCGCC--GCCAATT-ACATTCCGCT-ATCAG---TGGAAATGGCGGGCACTCAGGGATGGC-TTAGAATTC-AAACAAATTATTTTTATAGAAATTA
gi|10 : tcGGGGGA----TAC-A-TTA-CAT---ATT--CATATTCA-----CA-AAA------CTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG--ATCTA--TTAA------TTAATT--AT-TTCAG-ATTAA---A----------TA----T--TTGT-TGTTTTCATGCTT-T-T-ATATTGATTT-TTG-----TAAT-TT--TAC-TTAGTTT---ATCTTCAGTTTGA-------TTT-A-TTTCT-GTTTTAATGACTATTATTGTTATG---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------ATTACTG-CAG-CAAGATATTTT--TTCCA--CACAT-A------TAT--GTACA-T-----T--TATAC-TCATTGGAAATATTTC-TATAGT-AGTGGCTGTG-TAA-TCCG-ACAATTCGTG-CTTGA--AAGGTC---GCCAAATTCAA-AGTCAG-AACTT-TAC-ATTAC---ATTGTATGTACCTAT-AC-CACCGTGTT-ATA-AAG--GG--TA--------------AAA------AAG-AGAACCTAATTGT-TT---C-AGT----TA-CT-TG--CT---------ACTGTTTAA-TGA-AT-CTAAA-CGCTTATG-A--TATACCGACTTTGACGA-GTGC-TAGATCTACTA-tcatactttctgcacgataattgaacaaaataat
gi|10 : AGTGCTAGATCTA----CTAAAGG-TTATGACCCTAGAAACGTGG-CATT-ACTGTTaaggttatgaccctagaaacgtggcattactgtt
gi|11 : gggggatacattacatattcatattcacaaaacttctttgcgcttgcatgtgactacatgatctattaattaattatttcagattaaatatttgttgttttcatgcttttatattgatttttgtaattttacttagtttatcttcagtttgatttatttctgttttaatgactattattgttatgtattattcattaagcagtacagattactgcagcaagatattttttccacacatatatgtacatttatactcattggaaatatttctatagtagtggctgtgtaatccgacaattcgtgcttgaaaggtcgccaaattcaaagtcagaactttacattacattgtatgtacctataccaccgtgttataaagggtaaaaaagagaacctaattgtttcagttacttgctactgtttaatgaatctaaacgcttatgatataccgactttgacgGT-C-AATT--TATCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AG------T-TA-T-CT--GCCATTTAGCACC-GT-T--GTCC--TATAAATG-ACATTAA-T---GAA-A---A--TAA-AAATG--TT-TACCAAAAAT-ATCAAGCG--T-AGAAAGTACT-T--TAA-TT--AACA-AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT---TC-G--C-G-CTTAC-ATC-ACTTG-ACGC--T-T-CCA-TAACA-T------TAT-GAC-GAG-T-A--A-GATT--C-TT--GAA-AC--AAAGT------CATGA-AAAATTTCACTAGCAAC---TAACGTT-GA--T-GA-TTCCAA-TG----TAG-TTACTCT---ACT-TTGCC--ACTTG-C-TTTG--TG-TCG-------T-ATGG--ACATT
gi|13 : ATTCC-AATAGT-AGTGGCTGTG-TAA-TCCA-GCAATTCGTG-CTTGA--AATGTC---GTGAAATTCAA-TTTCAA-AACTT-TAC-A-----------TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATG-T-TT---C-AGTATTGTA-C--G---TTAAAAT-A-AACAGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCAACTTTGACGA-GTGC-TAGATTTACTT-CA-CCT--AA-A--ATGTCGG-A-TTCG-TATCGCT-CCGTGCA-GACTG-TTTTTCGTTCAGTGCAAACCA-TTCATTGTTTAAACCAGACC-G---------------TTTGCCC-TTCAGTGCAAAAT--A-----TTAAGG-T-ACGGCCCAAGatcataaaatcattaaacaatcataataagtttaattaacaattaagaaaactaaattcatgaaaattgtttaa
gi|14 : CCAGTTC-TAAT--TGTCATACC-A-CCTCAA-GAA-AATTG-CAATCACTTTTTAGTAGG----TTGTA-T-CT--C-CATTTA-CA-C-GT-TTCGT----TAT-AATG-AAATTAAAT---GAA-A-TGA--AAA-AAATG--TT--ACCAAAAATTATC-AGCGCGT-AGAAAGTACT-T--TAA-TT--AACAAAATTCAAA--ATGTACTC--CA----CA-TTTTGATTTTAAGC-G--C-GATTTACAA-C-AC-TG-GCGC--T-T--CA-T-ATG-T------TAT-GACTAAGTT-A--A-GATT--C-TT--GAA-GA-AATAGTACATGACATGA-AACATTTCACTAGCAACTAATAAC--T-GC--T-GA-TTCCAA-TG---ACAG-TTT
gi|17 : t------AAATAT-TTC---A-TTTTCC-CC-GGA-TTAA-TC----GCTCCATTT-T-TACAAAA-TATTT-CG--GC-AAACTG-----C-T-T------TAGA-AATT------G-----TAGATTTACGTAATA----C-------TT------------GTGATTA----GTAATACACTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAA---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTAT--T--TT--GA-ATTATT-C-GG-ATATCCATCTAGCT---C-TA-TAC---AATCTAA-TTAAAA--TCA-G--ATT------C-TCTTT-CA-GCGT-T-ACATT----TTT-CC--AGTG-TAAT--------------------
gi|19 : CCAGT-C-AATT--TGTCA-CAA-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-A--TAT-AATG-AAATTAA-T---GAA-A-T-AATAAA-AAATGT-TT-TACCAAAAAT-ATC-AGCG--T-AG-AAGTACT-T--TAA-TT--AAC--AATTCAAA--A--TA--A--CA----CATTTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-T---CGCAATAT-ACA-T-ACA-G------TAggttataga
gi|2 : tCCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-C---G-CATTTA-CA-C-GT-T--GT-A--TAT-AATGGAAATTAA-TTTTGAATA-A-A--AAA-AAATG--TT-TACCAAAAAT-AT--AGCG--TTAGAAAGTACT-TCTTAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACA-T------TAT-GAC-GAG-T-A--A-GATTTTC-TT--GAA-AC-AAA-GT------CGTGA-AAAATTTTACTA-CAAC---TAAC--T-GA--T-GG-TTCCAAATG---ATAAATTTCTCT---ACT-TTG-C--ACTTA-C-TTT---TA-TCG-------TTATGGTTACATTTGAA--TT------ATGATT---ATCAA--AAAAA-TGA--CG-TAA----AT-ACAAAG-ATA----A--GGCTCA-GCTCATACT--CCA-TC--TTCCGG-TTACAATAAAGTT--ACT-------GTG------------------AAT--TTTCTA---TAA--T------AAATTG-TTT---C-TTTTCC-CC-TGA-TTAA-T-----TCTCCTTTT-GATAAAATA-TATTT-CA--GC-AAACAA-----C-T-T------TTTT-A-TT------G-----TC-----------------C-------TTTACGTAATACATGTGATTATT--G-------CTGGAAGA--AGGGT--CACG--T-C-AA-A-A-T---TTG---GG--T-ATG-GAAGTCTG-TTTCGG-------G-TATTCATTTTAGAAT-ATA---T--TTT-GG-ATTATT-CCGG-A--------TAGCT---C-TA-TAC---AATCTAA-T-TAAA--TCAGG--ATC------C-TCTTT-AA-GCGT-T-ACACT----TTTTCC--AGTG-TAATGGTTAGAGAAGATGTTATTTCT----ATTAAGA---------------TTTAGC--TAG-GT-------------ACA-ATGGAAATTG---CATT-TATT-TTGTGG-AAA--TT----T-CTATTTGT-ATT--TT-G----GGAAT-A-----A-TA-CA---T------ATGATCTGTTCATT-TT-TTG-TG--CCT--TGA-CGAA----ACAAT-GTT-AAAA-GAAG--GGGG-GG-G-GGG---GGGGGGGGGAGATTAC-A-TTA-CAT---ATT--CA-----------TA-AAC------TTTCTTT-T-GC-GC-TTGCA---TCGTGAC-TAC-ATG-GATCTA--TTAA------TTA--T--AT-TTTATTACTACAT-G----------TAATATT--TTGT-T--CTTCATGATT-T-TGTTATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTCAGTTTGATTTT-A-TTTCT-GTTTTAATGA-----AT----ATAAGGTATTA-TT-TAA-T--A---CCAG-TACGGGGGAAAAAACAAT-TTTTGCAG-CAAGATATTTT--TTTCC-ACACAT-ATTGCTGCAT-TGTATACTGTACATG-TATACTTCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-G-----CGTGTTTTGA--AAGGTC---GC------CAA-ATT-AA-AACTA-TAC-A-------------------TAT-ACTCACCGTGTT-ATA-AAG--GGTTT---------------AAAAATTTTAAG-AGAA-CTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT---AACTGATT-A-TGA--------------TAT-------TACCGCTTTTGATGC-GTGC-TAGG---A---------T--AA-A--GT----G-ATTTCGTTTTCGCT-CCTTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATT---------------GTTTAAACCAAACCATTTCGCCC-TTCAGTGCAAAAC--ATTTTTTTAA-G-T-ACGGCCCTAGAAACGT-G-CAGG-ACTGTTCAA--TCCACATCGTG--A-TAAC-CGTAG-AAACATTCAGAACCG-C--G-CAA-T-ACATT-CGCT-ATCGGGTC-GGAAATGGAGCTA-----GGAAAGGT-GTAGAATTCAAAAAAAAATATTT---TAG-AATTA-------AAAAACTTTTGCAaa
gi|20 : --ATT------C-TCTTT-AA-GTGT-T--CACT----TTT-CC--AGTG-TAATGGTTTTATAGAAGACG----TA----ATTT-CA---------------TTTATCTCTAG-AT-------------ACA-ATGGAAATT----CA-T-TATT-TTGTGG--AATGTT--------------------TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CG-A----ACAAC-GTT-AAAG-AGGG--GGGGGGG-G-GGTGGGGGGGGGGGG----TAC-A-Tgataa
gi|22 : gaGATTATG-A--GATACC----CTGAAGC-GTGC-TA------TTA-TA-CCTTCAA-A--TC----G-G-TACG-TTT-GAT-TCATGGA-AATTG-TTCATTGTTCAGTGCAAACCGTTTCATaat
gi|23 : -AAAA-G--G--GGGG-GG-G-GG----GGGGGGGGG----CAC-A-GTA-AATTAAATT---A-----------CC-AGCCTAGGGTTTC-TT-T--T-GC--TACA-----GTGAC-C-C-AGGATA---A--TTAAC-----TTA-TGGAAT-CTCGTTACTacaaaaatcatttcctaaatctgcagatcgtttaag
gi|24 : acA-CAC---AATCTAG-TTTAAA--TCA-G--ATC------C-TCTCT-TG-CCAT-T-ATACTACCTTCT-CC--AGTG-TAAT--------------------tccactgaggtaattcttgttc
gi|3 : CCAGT-C-AATT--TGTCA-ATC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTCGATTT--AGC-A--T-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACA-T------TAT-GAC-GAG-T-A--A-GATT--C-TT--GAA-AC-AAAAGT------CATGA-AAAATTTCCCTAGCAAC---TAAC--T-GA--T-AA-TTCCAG-TG---ATAG-TTTCTCT---ACT-TTG-C--ACTTG-A-TTTG--TA-TCG-------T-ATGGT-ACATTTGAAATTT------ATGATT-T-ATCAAC-AAAAA-TGA--CG-TAA----A-TGCAAAG-ATATTT-A--GTCTCGTAC--GTACT--CCA-TC--TTCCGG-TTACAATAAAGTT--ACTAGGCCTAGTG------------------AAT--T--CTA---TGAA-T------AAATGT-TTT---C-TTTTCC-CT-TGA-TTAA-TA----GTTCCTTTT-G-AACATAA-TATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------G-----TA-----------------C-------TT------------GTGAC------G-------CTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTATAAT-TTA---T--TT--GG-ATTATT-C-GG-A--------TAGCT---C-TA-TAT---GA--TAG-TCTAA------------C------C-TCTTT-CA-GCGT-T-ACATT----TTC-CC--AGTG-TAAT--------------------CA----ATTA-GA---------------TTTATCA--AG-AT-------------TCA-ATGGAAATTA---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATGA-TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CAAA----ACAAC-GTT-AAAC-GATG--GGGGTGG-G-GGT---GGGGTGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-AC-TTGCA---T-GTGAC-TAC-ATG-TATTTA--TTAA------TTA-TC--AT-TCTATTACTAT--------------TA----C--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTAA-------TTT-A-TTTCT-GTTTTAATGA-----AT----AT----CATTA-TT-CAT-TA-A---GCAG-TACAA-----------AT-ATTT-CAG-CAAGATATTTT--TCCAA-ACACAT-AAT----CA--TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTTGCTGTG-TAA-TCTG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTA-TAC-A-TAC---ATG-TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AGG-AGAACCTAATT-T-TT---C-AGTATTGTT-CT-T---TTAAAAT-A-AACTGATT-A-TGT-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AATAC-GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTAATT---------------G---------------TTCG------CA----AAAAT--A-----TTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ATTGTTCAA--TCCACATTG-G--A-TTAC-C-TAG-AAACATTCAG-AC---T--G-CAA-T-ACATTCCGCT-ATTGGGTCTGAAAATGGAG--------GAAATTGC-TTAGAATTC-AAAAGAAATATTA---TAG-AATTACTTTTAGATAGACTTTTGCAggtaagagaagatctgattaaaattagattgtatacttacaa
gi|4 : CCTCA--GAA-AATTG-CAA-CAC-----A--AGT----TT-TACT-CT--GGCATTTA-CA-C-GT-T--GTTC--TAT-AATG-AATTAAA-T---GAA-A-T-A--A----------------------T-AT--AGTG--T-AGAAAGTCCCCT--TAA-TT--AAC--AATTCAAA--AT-TG--A--CA-----A-TTTTGATTT--ATC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACATT------TAT-GAC-GTG-T-A--A-GATT--C-TTGCGAATAC-AAAAGT------CATGA-AAAATTTCACTAGCA------AAC--T-GA--T-GA-TTCCAA-TG---ACAG-TTTCTCTG--ACT-TTT-G--ACTTG-C-TTTG--TA-T-G-------T-AAGGT-ACATT--AAATGT------ATGATT-T-ATCAACAAAAAA-AGA--CGCTAA----A-TACAAA--ATATTGAA--GTCTCG-AC---TACT--CCATTC--TTCCGG-TTAGAA-AAAGT----CTA---T--GTG------------------AAT--TA-CTA---T-AA-T-------AATGT-TTT---TATTTTCCGCC-TGATTTAATTG----GCTTCTTTT-G-TACAAAA-TATTT-CG--GC-AAAC-G-----C-T-T------TATC-AACT------GTAATTTA-----------------CGTTATAATT------------GTGATTA----G-------CTGGAAGA--GGG----CACG--TTCAAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTGTTT-CGG-------G-TATTCATTTTCGAAT-TTAT--T--TT--GG-ATTATT-C--G-A--------TAGCT---C-TA-TAC---AATCTAA-T-TAAAT-C---AATATC------G-TCTTT-AA-GCGT-T--CATT----TTT-CC--A-TGTTAATGGTTAGATAAGATGTTATTGCA----ATTA-GA---------------TTTGTC--TAG-AT--------------CA-ATGGACATTG---CC-T-TGTT-TAGTGG-GA--------------------ATG--TT-G----GGAATAAA---AA-TA-CA---TAAACAAATGGTCTG-TCATT-TT-TTG-TGGCCTT--TAA-CGAA----ACAAG-ATTAAAAA-GATG------------------CGGGGGAAA----TACAA-TTAGCAT---ATT--CATTC--------CACAAC-------TTC-GT-T-GT-GC-TTGCT---G-GTGACGTAC-ATG-TACATA--TTAA------TTA-TT--CT-TTTATTACTACAT-G----------TATT--T--TTGT-T--CTTCATGCTT--------TTGATTT-T-G-----TAG--TT--TAT-TTAGTTC---AT------TTTTAG------TTTGA-TTTC-----------A-----AT----AT----TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATA-TTT--TTCCACACACAT-A----------TGT-CA--GT----------T-TCAATGGAAATATTCTATATATT-AGTGGCTGTGTTGA-TCC--GC-ATTCGTG-CTTGA--AAGGT----GCAAAATTCAAGATTCAA-AA-TT-TAC-A-TATGTTAC--TATGTACCTATAACTCACCGTCTT-ATA-A----GG--T----------------AA------AAG-AG-ATCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-A--TGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGATTTGGACGC-GTG--TAGATC-ACTACCA-CCT---------T----G---T----TTTCGCT-CCGTGCA-GACCGATTTTTCGTTC-ATGC-AACCA-TTCATTG--------------G---------------TTCt
gi|5 : GC-C-AATTATTGTCA-ACCTAACCTCAA-GAA-AATTG-CAA-CAC-----A--AGGAGATTT-TA-TTCTTGG-CATTTA-CA-C-GT-T--GT-CATTAT-GATG-AATCAAA-T---GAA-A-T-AGAAAA-AAATG--TT-TACCCCAAA--ATC-AGCG--T-AGAAAGTACTAT--TAAATTCAAAC--AATTCAAA--AT-TA--A--CAAGACTA-TTTTGATTT--AGC-GAGC-GATTTAC-A-C-AC-TG-ACGC--T-T-ACA-T-ACA-T------TATAAAC-GAT-T-A--AGGATT--C-TT--GAA-AC--AAAGT------CATGATAAAATTATACTAGCAAC---T-AC--T-GAGTT-GATTTCTAA-TGGATACAGTTTTCTCTAAAACTATTG-CAGACTTG-CATTTGGCTACTCG-------A-ATGGTAACTTTTGAAATTTTTTGACATAATCAA-ATCAAC-AAAAATTAA--CG-TAA----ATTACAAAGAATATTT-A--GTCTCGTAC--GTACTCCCCA-TCTGTTCCGG-TT--GATAAAGTTAAACTT---CTATTGTATAACCGGAAGATTAGAAATAAT--CTATGTTGAA-TTCTGTAAAATGTATTTTCCC-TTTTCC-TCATGA-TTAC-TATTGTGCCGCTTTTGG-TTCATAA-TATTTCCG--GCAAAACAA-----C-T-C------TATATAATT------G-----TAAATTTAACGTAATATCTC-------CT------------GTGATTACACGG-------CTGGGAGG--AAGGTTACACGT-TTC-AACA-ATTAC-TAGAAAGGCTT-ATGCGAAGT-TG-TT-CGGCATAATTGTTATTCA-ATTAGAAT-TTA---TTCTT--GGTATTATT-C--G-A--------TAGCT---CTTATTGC---GATCTAATTCTAAAATA---G--ATT------CATCTTTATATGCGT-TAAGACT----TTT-CC--AGTG-aaaacaagc
gi|5 : tA----ATTATAA---------------TTTATCTCTAGCAT-------------ACATAGGAAAATTGGAGCA-TATATTATTGTGGGAAATGTTATATT-GTATTTGT-ATGATTT-GTGCGGAAAT-AAGGACA-TA-AA---TT-----AAGATTGG-TCAAT-TT-CTGATGA-CCTGTTGA-CGAAGCTAACAGC-CTT-AAAA-AA------GATAG-GAGGT---GGGCAGGGA----TAC-AATTA-CAT---ATT--CAGTGATCTTCATCA-AAC------TTTC-TT-TTGC-GCCTTGCA---T-GTGAC-TA-------AGCTG--TTA--------TA-TC--ACACTTATTACTACCAGG----------TA----TAATTGT-T--CTTCATG-TT-T-TGATATTGATTTCT-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTgacatggttaagaagaagaataaatgttaagtcttcaaattataatttatctctagcatacataggaaaattggagcatatattattgtgggaaatgttatattgtatttgtatgatttgtgcggaaataaggacataaattaagattggtcaatttctgatgacctgttgacgaagctaacagccttaaaaaagataggaggtgggcagggatacaattacatattcagtgatcttcatcaaactttcttttgcgccttgcatgtgactaagctgttatatcacacttattactaccaggtataattgttcttcatgttttgatattgatttctgtagttttacttagttcatttttcagtttgcatttaattt
gi|6 : tgccaattattgtcaacctaacctcaagaaaattgcaacacaaggagattttattcttggcatttacacgttgtcattatgatgaatcaaatgaaatagaaaaaaatgtttaccccaaaatcagcgtagaaagtactattaaattcaaacaattcaaaattaacaagactattttgatttagcgagcgatttacacactgacgcttacatacattataaacgattaaggattcttgaaacaaagtcatgataaaattatactagcaactactgagttgatttctaatggatacagttttctctaaaactattgcagacttgcatttggctactcgaatggtaacttttgaaattttttgacataatcaaatcaacaaaaattaacgtaaattacaaagaatatttagtctcgtacgtactccccatctgttccggttgataaagttaaacttctattgtataaccggaagattagaaataatctatgttgaattctgtaaaatgtattttcccttttcctcatgattactattgtgccgcttttggttcataatatttccggcaaaacaactctatataattgtaaatttaacgtaatatctcctgtgattacacggctgggaggaaggttacacgtttcaacaattactagaaaggcttatgcgaagttgttcggcataattgttattcaattagaatttattcttggtattattcgatagctcttattgcgatctaattctaaaatagattcatctttatatgcgttaagacttttccagtggacatggttaagaagaagaataaatgttaagtcttcaACA--TTC-AA-ATG-TAAGTAG---GG--T-ATG-GCAGTCTG-TT-CGG-------G-TATTCATTTTAGAATGTTA---T--TTTCGG-ATTATT-C-GGGA--------TAGCTTTGC-TA-TATTATAATCTAA-TTAAAA--A---A--ATCAGGATAC-TCTTT-CA-GCGTGT-ACACT----TTT-TCGCAGTG-TAAC--------------------CA----ATT--GA---------------TTTATCA-TAG-AT-------------ACA-ATGGAAATTA---CA-T-TATT-TTG-GG-AAATTTT----TCCT-TTTGT-ATG--TTGG----GGAAT-AA---CA-TA-CA---TAATTA-ATGATATG-TCA-TGTT-GTG-TG--CCT--TGG-CAAA----ACAAT-GTT---AA-GATA--GGGGTGG-G-GGT----------------TAC-A-TTA-CAT---ATTTCCA-----------CA-TAC------------T-T-GC-A------A---T-GTGAC-TATAATG-TATCTA--TCAA------TTA-TTC-AT-TCTATAACTAT---T----------GA----C--TTGC-TG-CTTCATGTTT-T-CGATATTGATTT-T-G-----TAGT-TTTGTACTTTAGTTC---AT------TTTGA-------TTT-A-TTTCT-GTTTTAA-GA-----AT----AT----CATTA-TTACAT-TA-AAGGGCAG---CAG-----------AT-ATTT-CAG-CGAGGTATTTT--TTCCA-A-ACAT--------CGTATGTACA-TGT--A---TATGC-TCATTGGAAATATTCC-TATAGTAAGTTGCTGTG-TAACTCTG-GCAATTTGTG-CTTGAACAAGGTTCCGGCGGAATTCAA-ATTCAAGAACTT-TAC---------AT--TATGTACTAAT-ACTCACCGTGTTAATA-AAG--GG--TAAAAAGCTCGGGGTAAAA------AAG-AGAACCTGCTT-T-TTGTGCAAGTATTGTAGCT-TTGATTAAAAT-AGAACTGATT-AGTGA-ATGC--AATCGATTATG-AATTATA-CGACTTTGACGC-GTGTGTAGATTTACTA-CAGCCT--AA-AACGT----GAA-TTTG-TTTTGCT-CCGTGCA--ACCG-TTTTTTGTTCAATTCAAACCA-TTAATT---------------G---------------TTCGC-----TA----AAAGT--A-----TTAAGACT-A----CCTAGAAACGTGG-CA-G-ACTGTTCAAGGTCCACATTG-G--ATTGACGC-TAG-AAACATTCAG-ACCG-T--G-CAA-TGACATTCCGCTGATCGGGTCTGGAAATGGGG--------AAAATGGCATTAG---------------------------ATTACTTTTAAATAGACTTtcagtttgcatttaattt
gi|7 : CCAGT-CCAATT--TGTTA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTC-CA-C-GT-T--GT-T--TA--AATG-AAATTAA-T---GAA-A-G-A--GAA-AAAAGGTTT-TACCAAAATT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TG--C--CA----CA-TTTTGATTTTTAGCCG--CCGATTTAC-A-C-AC-TG-ACGC--T-TTCCA-T-ACA-T------TAT-GAC-GAG-T-ATAA-GGAT--C-TT--GAA--C-AAAAAT------CATGA-AACATTTCACTAGAAAC---TAAC--T-GA--TAGA-TTCCAA-TG---ATAG-TTTTTC----ACT-TTG-C--ACTTG-C-TTTG--TA-TCG-------TTATGGT-ACATTTGAAATTT------ATGATT---ATCAAC-AAAAA-TGA--CG-TAA----AT-ACAAAT-ATATTT-AAAGTCTCG------TACT--CCA-TC--TTCCGGGTTACAATAAAGTT--GCTA------GTT------------------AAT--T--CTA---CAAAAT------AATTGT-TGT---C-TTTTCC-CC-TGA-TTAA-------GTTCCGTTT-G-TACAAAAATATTT-CG--GC-AAACAA-----CAT-TATAAACTATA-AATTTACGTAA-----TA-----------------C-------TT------------GTGATTAC---G-------CTGGAAGA--A---------------------A-TAT-TAA---G---T-ATG-GAGGTATG-TT-CGG-------G-TATTCATTTTAGAAT-TTA---T--TT--------------------------TGGCG---CGTA-TACC--AATCTAA-TCAAAA--TCA-G--ATC------C-TCTTT----GC--------------TGG-CT--GATG-TAAT---------------------G----GTGA-GA---------------------G-AAG-AT-------------GTT-AT-----TTA---CA-T-TATT---------------------CT-TTTGT-ATG--TT-G----GGAAT-AA---CATTA-CA---T------ATGATCTG-TCA-T-CT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-TATG--GGGGGGG-G-GGG---GGGGGGG
gi|8 : tCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-CTAGAATTC--AAAAAAATATTT---TAG-AATC--------ATAGACTTTTGCA
gi|9 : -T-ATGACCCTAGAAACGT-GGCA-TTACTGTTCAA--TCCACAT---G--G-TTAC-C-TAG-GAACATTCAG-ACCG-CTCG-CAA-T-ACATTCCGCT-ATCGGGCCGTGAAC--------------GAATGGCCTTAGAATTC-AAAA--AATATTT---TAG-AATTACTTTTGGATAGACTTTTGCAgataatttgaacaaataatgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgattaaaatataaatataaaaatttagctcaaaaccgtgcattcatcgtctattaacagacagaatcaaacactagatgacattttaatgtaagctgtcaaagcatttcgaatgtctcatattacttttttcttctttcacagtgactaaataacaaacgatacttttaaaatcatgtcgttattcaatgtgttagtatttttcaatagaaaatagttatatcttggaacatatttagaggaatgcccatgattcgtaaccaaagcaaaaccacatttataaaatataacatcatttttctaatacttgcacgaattaagatgcaaatatctccgtagccattgcaatggagaggtatgaaaagatg
7 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): AAAAACCCAAAATTAATATTTAGCTCAAAAACGTGTACCATGTCCTTTAAACAGACCAGAACAAAATCAGATGCATTTTGTAGCTGATCAAAAAGAAATATTGAATGCCTCAACTCTTTTTCTATCTTTCACAGTGCAAATATACAAAACTAACTTTTAAAAATCGTGCTTCGTTATCATGGGTATTGTTTTACATAAGAACTGTTTATCGAACTATTCTTAGAGGAATCCACTGGCATCTAAGCAAAGGCCAATTTATGAAAATAACCATTATTAAAAGAAACAACAGTTTAACTTGCCACAAAAAACACCGCCGTAGCCAATTGGAGACGCTATTTTGAAAAGACG
Unaligned ( gi|15 ): AGAACAAAACCAGATATGCATTTGTTAGCTGTCAAAGCAATTGAATGTCCTCTATTACTTTTTCTATCTTTCACAGTGCAAATATTACAAACGATACCTTTTATAAAATTCATGTTTCGTTATTCAATGTGTATTTGTTTTCAATAAAAAAATTGTTTAATCTGAACCTATTAGAGGAATCCATGGCATTCTAAGCCAAAGCCCACATTATAAAAATTAACCATATTTAACTTGTCAACAGAATTAAGATGCCAAAAACTCCGTAGCCATGCAATGGAGACGTATGAAGAGAT
Unaligned ( gi|16 ): AACAAAAACAGATACATTTTTAGCTGTCAAAGCAATTTGAAATGTCCCTCAACTACTTTTTCTATCTTTCACAGTGCAAATATACAAACGATACTTTTAATAAATCGTGTTTCGTTAATCAATGGGTATTGTTTTCAAAAGAAATGTTTATCGGAACTATTTGGAGGAATCCATGGCATTCTAAGCAAAGCCCACATTTATAAAAATAACCATATTAAAGAAACGACAGTTTTAACTTGCCACAGAAGATGCAAAAATCGCCGTAGCCAATGGAGACGTATGAAAAGATG
Unaligned ( gi|18 ): AGCTGTCAAAGGCAATATTGACCTTCTCTACTACTTTGTTCTATCTTCACAGTGCAAATATACAAAACGATTACTTTTTAATAATCATGATGTTCGTTACAGGTATTGTTTTCATAAAAAAATAGTATCTGAACTAATGAAATCAGAGGAATCCGATGGCCATTCTAAGCAAAACGCCCACATTTTATAACAATTAACCATATTTTAACTTGCCAACCCAGAAATCTTCGAAGCCATGCAATGGAGCACGTTTATGAAA
Unaligned ( gi|21 ): AGACAGAACAAAAGCAGACATGCATTTGGATGCTGTCAAAAGGCAACTTTGAATGTCGCTCTGTAAAACTTTTTCTATCTATTTCACAGTGCCAAAATATTATTAACGATACTTTTTGAAATCTTGTTTCGTGTATTCAATGGGTATTGTTTTCTTTAAAAAAAAA
Unaligned ( gi|25 ): TGTAAAATTTAATTAAAGTGAAGATTTTCTCAACCTTAACGGTTGCACTTCTCCAGTGCAACGGTAAGAGAAGCTGATTTTAATTA
Unaligned ( gi|26 ): AGATCTTCTGTAACCTTTACACTAGTTCCCCAGTGTTATGGTTAGAGAAGACCTGGCTTTAATTACATGTACCTATGTACATTG
Alignments
lowQualScore : 11111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111
lowQualScore : 11111 1111 111111 11 11 11 11 111111 11 111111 111 222222222 333333 111 1 1111111 11 333333 7777777777777777777777777777 111 22222222 11111 22222222222 11111111111111111 111111 11111111111111111111111111111111111111 33333333333333 11 111 1 1111111 222 22222222222222 111 111 111 11 0000000000000000000000000000000000000000000000000000000000000000000000 222 22222222222222 1111 44444444444444444 11 1111 333333 1 1 11 1111 1111 1111 44444444444 1111111 11111 11 111111 11 66666666666666666666666 11 1111111 111 111111 2222222 1 11111 3333333333 111 333333333333 1 444444444444 3333333333 111 1 5555555555555 444444444444444444444444 111 1 11111 111 22222222222222222222222222222222 111111111111111111111111111111 11111 44444444 1 111 11 1111 1111 33333333 1 111 1111111
lowQualScore : 5 5 66 5 5 4 4 4 4 11111 66 9999 4 4 4 66 8 4 4 4 4 66 9999 4 4 4 777 4 444444 4 00 4 4 55 66 4 8 22 4 66 00 66 4 88888 9999 4 22 4 66 4 4 4 4 4 4 66 4 55 4 4 222222 4 5 5 5 5 66 5 66 5 66 5 44 444444 5 888 0 66 5 66 5 5 5 888 5 5 555 5 5 77 5 5 77 5 444444444 999 3 000000 666 888 99 3 9999999 99 777 55 000000 99 6 99 6 99 4444444444444444444444444444 99999 6 111 4 22222222 1 5 77777 5 5 88888888888 5 5 5 5 77 5 66666666666666666 1 5 666666 66666666666666666666666666666666666666 77 77777777777777 77 0 33 222 5 5 666 99 888 66 5 5 0 6666666 5 5 333 66 66 5 11111111111111 333 8 3 000 3 88 666 111 3 88888 00 3 3 55 7777 3 55 3 8888888888888888888888888888888888888888888888888888888888888888888888 333 5 99999999999999 55 1111 5 5 5 0 44444444444444444 5 11 5 0000 5 888 5 5 888 111111 0 5 5 5 5 11 66 5 0000 5 4 4 7777 9 4 4 3333 3333 555 5 888 66 66666666666 5 9999999 5 5 5 5 55 33333 5 55 11 2 66 999999 5 11 5 0 22222222222222222222222 5 33 3 999 22 5 5555555 5 77 5 000 666666 1 8888888 6 6 6 0 66666 5555555555 6 6 6 6 111 6 222222222222 6 3 6 1 99 99 222222222222 0000000000 6 5 5 5 5 5 22 5 77 000 0 5 5 5 7777777777777 1 5 5 5 77 77 333333333333333333333333 5 5 5 000 1 5 55555 222 5 5 5 5 77 5 3 5 66 5 5 55555555555555555555555555555555 1 5 6 5 5 5 5 5 888888888888888888888888888888 44444 6 11111111 6 5 5 1 0 3 6 888 0 11 0 999 3333 1 8 8 8 8 5555 8 8 8 6 3 1 55555555 3 99 5 111 6 4444444
lowQualScore : . . .. . . . . . . ..... .. .... . . . .. . . . . . .. .... . . . ... . ...... . .. . . .. .. . . .. . .. .. .. . ..... .... . .. . .. . . . . . . .. . .. . . ...... . . . . . .. . .. . .. . .. ...... . ... . .. . .. . . . ... . . ... . . .. . . .. . ......... ... . ...... ... ... .. . ....... .. ... .. ...... .. . .. . .. ............................ ..... . ... . ........ . . ..... . . ........... . . . . .. . ................. . . ...... ...................................... .. .............. .. . .. ... . . ... .. ... .. . . . ....... . . ... .. .. . .............. ... . . ... . .. ... ... . ..... .. . . .. .... . .. . ...................................................................... ... . .............. .. .... . . . . ................. . .. . .... . ... . . ... ...... . . . . . .. .. . .... . . . .... . . . .... .... ... . ... .. ........... . ....... . . . . .. ..... . .. .. . .. ...... . .. . . ....................... . .. . ... .. . ....... . .. . ... ...... . ....... . . . . ..... .......... . . . . ... . ............ . . . . .. .. ............ .......... . . . . . . .. . .. ... . . . . ............. . . . . .. .. ........................ . . . ... . . ..... ... . . . . .. . . . .. . . ................................ . . . . . . . . .............................. ..... . ........ . . . . . . . ... . .. . ... .... . . . . . .... . . . . . . ........ . .. . ... . .......
lowQualScore : 0 0 99 0 0 4 4 4 4 11111 11 4444 4 4 4 11 9 4 4 4 4 11 7777 4 4 4 888 4 111111 4 66 4 4 66 11 4 9 22 4 11 66 11 4 66666 4444 4 22 4 11 4 4 4 4 4 4 11 4 66 4 4 888888 4 0 0 0 0 99 0 99 0 99 0 44 444444 0 888 1 99 0 99 0 0 0 888 0 0 777 7 7 99 7 7 99 7 777777777 444 2 888888 888 777 22 3 8888888 22 888 88 222222 22 7 22 7 22 2222222222222222222222222222 33333 7 777 2 33333333 7 7 33333 7 7 33333333333 7 7 7 7 99 7 44444444444444444 7 7 444444 77777777777777777777777777777777777777 99 11111111111111 99 7 66 000 0 0 111 55 888 99 0 0 0 2222222 0 0 888 99 99 0 00000000000000 888 0 6 000 6 88 444 000 3 33333 99 3 3 88 1111 3 00 6 4444444444444444444444444444444444444444444444444444444444444444444444 111 0 88888888888888 44 0000 0 0 0 1 11111111111111111 0 99 0 6666 0 888 0 0 888 999999 0 0 0 0 0 99 99 0 6666 0 4 4 1111 9 4 4 9999 9999 333 0 888 99 99999999999 0 5555555 0 0 0 0 11 99999 0 11 11 0 99 444444 0 99 0 4 33333333333333333333333 7 66 0 444 66 7 7777777 7 99 7 000 444444 0 3333333 7 7 7 5 77777 0000000000 7 7 7 7 777 7 777777777777 7 3 7 7 22 88 555555555555 7777777777 7 7 7 7 7 7 99 7 99 000 1 7 7 7 9999999999999 4 7 7 7 99 99 666666666666666666666666 7 7 7 000 4 7 99999 999 7 7 7 7 99 7 1 0 99 0 0 55555555555555555555555555555555 7 7 6 7 7 7 0 7 555555555555555555555555555555 22222 7 55555555 7 7 7 7 7 3 7 333 8 00 8 444 0000 0 0 0 0 0 4444 0 0 0 7 2 5 88888888 3 88 7 777 7 2222222
consensus : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------T-AT-GAC-GAG-T-A--A-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCG-------T-ATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----ATTACAAAG-ATATTTA--GTCTCG-A--CGTACT--CCAT-C--TTCCGG-TTACAATAAAGTT--ACTA---CTAGTG------------------AA--T--T-CTA---TAAA-T------AAATGT-TTT---C-TTTTCC-CC-TGATT-A-----AT--GCTCCTTTT-G-TACAAAA-TATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------GTA--TT-------------C-------T------------T--GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTAT--T--TT--GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAA-TTNAAA---TCA-G-ATCC-TCT-----TT-NA-GCGT-T-ACA----C-TTTTCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCG-TAG-AT-------------ACA-ATGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTAC---G----------TA----T--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G--------------TTCGCCC-TTCAGTGCAAAAT--A----TTTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
Reference ( family-546 ) : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------T-AT-GAC-GAG-T-A--A-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCG-------T-ATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----ATTACAAAG-ATATTTA--GTCTCG-A--CGTACT--CCAT-C--TTCCGG-TTACAATAAAGTT--ACTA---CTAGTG------------------AA--T--T-CTA---TAAA-T------AAATGT-TTT---C-TTTTCC-CC-TGATT-A-----AT--GCTCCTTTT-G-TACAAAA-TATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------GTA-----------------C-------T------------T--GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTA---T--TT--GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAA-TCNAAA---TCA-G-ATCC-TCT-----TT-NA-GCGT-T-ACA----C-TTTTCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCG-TAG-AT-------------ACA-ATGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTAC---G----------TA----T--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G--------------TTCGCCC-TTCAGTGCAAAAT--A----TTTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
gi|1 : -C-AATT--TGTCA-ACC-AACCTCAAAGAACAATTGGCAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-CCGTGT--AT-T--TAT-AATG-AAAATTA-T---GAA-ACT-A--AAACAAATG--GCGTACCAAAATT-AGC-CGC---T-AGAA-TTACC-TACTAA-TT--AAC--AATTCAAACGAT-TA--AGCCA----CT-TCTTGATTT--AGC-G--C-GATT-AC-A-CCAC-TGGACGC--T-T-CCAAT-ACATGCCCCAT-AT-GAC-GAG-TCA--A-GA--TTCCTTG--AA-ACAAAAAGT------CGTG--AAAATTTTACTAGCACA---TAAC--TGGA--T-GG--TCC-AATG---AT-AA-TTTCTCT---ACT-TTA-C--ACTTACC-TTTG--TA-TCGTATACAAT-ATGG-T-ACATTGAAAATTTTAG---ATGATT-TCATCAACAAAAA-T-GACCCGCTAAATTTATTACAAAG-ATA--CA--GTCT------CATACT--CCAT-C--TTCCGG-TTACAATAAA-TT--ACTA---GTA-TA------------------AA--T--T-TTA---TAAA--------AAATGT-TTT---CTTTTTCC-CC-TGAT---------T--GCTCCTTCT-G-TACAAAA-TATTT-CGGCGC-AAACAAGCAATC-TAT------TTTA-AATT------GTA-----------------C-------T------------TAAGTAAT------G-------CTGGAAGATCGGGGTC-CACGATTTC-AA-A-T-TG--TAG---GG--TCATG-AAGGTCTG-TATTG-------G-TATTCATTTTAGAAT-ATAGTTC--TT--GG-ATTATCGTGG-A--------T-GCTC--C-TA-TAC----ATTTAA-TTAAAA---TCA-GAATCC-TCT-----TTCAA-GCGT-T-ACA----C-TTTTCC--AGTG--AA--------------------C--------------------TACATGGTT-A-GAGAAACAGAATGTTATTTCATAG-TAG-ATTAGCTAGGGTTAAAC--GTGGAAATTG---CA-T-TATT-TTGTGG--AATG--------CT-TTTGTGATG--TT-T----GGAAT-AA---CA-TACCATACT------ATGATCTGATCA-T-TTCTTG-TG--CCT--TGACCGAA----ACAATGGTT-AAAAGGATAACGAGATGGCT-GAC---GGGGGGGGAC---TAC---TTA-CAT---ATT--CA-----------TA-ATC------TTTC-TTCT-GCGGC-TGGCACTGT-GCGAA-TAC--TG-GATCTATTTTAAAATATGTCA-TT--AT-TTTATTACTAC---GCGCTTATAATTA----T--TTGTCT--CTTCATGCTTATATGTTATTGATTT-TCGTAAGCTAGTATT--TAC-TTAGTTTCTAAT------TTTCA-------GTT-ATTTTCTGGTCTTTACAA-----ATGA--ATA---TATTATTT-CATATATA---GCAGTTACA------------AC-ATCTGCAGACAAGATACTTTTATTTC--ACACATAA------CAT-TGTATG-TAT--ATGCTCAAC-TCATTGAAAA-A-TCC-TATAGT-AGTGGGT-TG-TGA-TACGCGCA----GTG---TGA--AAAGTC---GC-AAACT-----TTCAA-AACTTATACAA-AA----AT--TA------TAC-ACTCACCATGTT-ATACAAGCAGG--T---------------AAAC-----AAGAAGAACCTAATT-TCTT---CAAGTATTGTA-CTAT---TGAAAATAA-AACTGATT-A-TGAGAT-C--AA-CG--TGTGAA--TATACCGACTTTGACGCGGTGC-TAGA--TA------------AA-A--GT----G-A-TTCG-TTT-GCTCCCGTGCAGGACCG---TTTCGTTCAA-GC-TATCA-TTCATTA--------------GTTTAAACCAAACCATTCGCCCTTTCAGTGCAAAAT--ACT--TTTAA-G-T-ACGG-CCTATAAACGT-G-CA-G--CTGTTC----TCC-CATCG-GAAA-TAAC-C-TAGAAAACAGTCAG-ACCGCC--GCCAATT-ACATTCCGCT-ATCAG---TGGAAATGGCGGGCACTCAGGGATGGC-TTAGAATTC-AAACAAATTATTTTTATAGAAATTA
gi|10 : tcGGGGGA----TAC-A-TTA-CAT---ATT--CATATTCA-----CA-AAA------CTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG--ATCTA--TTAA------TTAATT--AT-TTCAG-ATTAA---A----------TA----T--TTGT-TGTTTTCATGCTT-T-T-ATATTGATTT-TTG-----TAAT-TT--TAC-TTAGTTT---ATCTTCAGTTTGA-------TTT-A-TTTCT-GTTTTAATGACTATTATTGTTATG---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------ATTACTG-CAG-CAAGATATTTT--TTCCA--CACAT-A------TAT--GTACA-T-----T--TATAC-TCATTGGAAATATTTC-TATAGT-AGTGGCTGTG-TAA-TCCG-ACAATTCGTG-CTTGA--AAGGTC---GCCAAATTCAA-AGTCAG-AACTT-TAC-ATTAC---ATTGTATGTACCTAT-AC-CACCGTGTT-ATA-AAG--GG--TA--------------AAA------AAG-AGAACCTAATTGT-TT---C-AGT----TA-CT-TG--CT---------ACTGTTTAA-TGA-AT-CTAAA-CGCTTATG-A--TATACCGACTTTGACGA-GTGC-TAGATCTACTA-tcatactttctgcacgataattgaacaaaataat
gi|10 : AGTGCTAGATCTA----CTAAAGG-TTATGACCCTAGAAACGTGG-CATT-ACTGTTaaggttatgaccctagaaacgtggcattactgtt
gi|11 : gggggatacattacatattcatattcacaaaacttctttgcgcttgcatgtgactacatgatctattaattaattatttcagattaaatatttgttgttttcatgcttttatattgatttttgtaattttacttagtttatcttcagtttgatttatttctgttttaatgactattattgttatgtattattcattaagcagtacagattactgcagcaagatattttttccacacatatatgtacatttatactcattggaaatatttctatagtagtggctgtgtaatccgacaattcgtgcttgaaaggtcgccaaattcaaagtcagaactttacattacattgtatgtacctataccaccgtgttataaagggtaaaaaagagaacctaattgtttcagttacttgctactgtttaatgaatctaaacgcttatgatataccgactttgacgGT-C-AATT--TATCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AG------T-TA-T-CT--GCCATTTAGCACC-GT-T--GTCC--TATAAATG-ACATTAA-T---GAA-A---A--TAA-AAATG--TT-TACCAAAAAT-ATCAAGCG--T-AGAAAGTACT-T--TAA-TT--AACA-AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT---TC-G--C-G-CTTAC-ATC-ACTTG-ACGC--T-T-CCA-TAACAT------T-AT-GAC-GAG-T-A--A-GA--TTC-TTG--AA-AC--AAAGT------CATGA-AAAATTTCACTAGCAAC---TAACGTT-GA--T-GA-TTCC-AATG----T-AG-TTACTCT---ACT-TTGCC--ACTTG-C-TTTG--TG-TCG-------T-ATGG---ACATT
gi|13 : ATTCC-AATAGT-AGTGGCTGTG-TAA-TCCA-GCAATTCGTG-CTTGA--AATGTC---GTGAAATTCAA-TTTCAA-AACTT-TAC-A-----------TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATG-T-TT---C-AGTATTGTA-C--G---TTAAAAT-A-AACAGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCAACTTTGACGA-GTGC-TAGATTTACTT-CA-CCT--AA-A--ATGTCGG-A-TTCG-TATCGCT-CCGTGCA-GACTG-TTTTTCGTTCAGTGCAAACCA-TTCATTGTTTAAACCAGACC-G--------------TTTGCCC-TTCAGTGCAAAAT--A-----TTAAGG-T-ACGGCCCAAGatcataaaatcattaaacaatcataataagtttaattaacaattaagaaaactaaattcatgaaaattgtttaa
gi|14 : CCAGTTC-TAAT--TGTCATACC-A-CCTCAA-GAA-AATTG-CAATCACTTTTTAGTAGG----TTGTA-T-CT--C-CATTTA-CA-C-GT-TTCGT----TAT-AATG-AAATTAAAT---GAA-A-TGA--AAA-AAATG--TT--ACCAAAAATTATC-AGCGCGT-AGAAAGTACT-T--TAA-TT--AACAAAATTCAAA--ATGTACTC--CA----CA-TTTTGATTTTAAGC-G--C-GATTTACAA-C-AC-TG-GCGC--T-T--CA-T-ATGT------T-AT-GACTAAGTT-A--A-GA--TTC-TTG--AA-GA-AATAGTACATGACATGA-AACATTTCACTAGCAACTAATAAC--T-GC--T-GA-TTCC-AATG---AC-AG-TTT
gi|17 : t------AAATAT-TTC---A-TTTTCC-CC-GGATT-A-----ATC-GCTCCATTT-T-TACAAAA-TATTT-CG--GC-AAACTG-----C-T-T------TAGA-AATT------GTAGATTTACGTAATA----C-------T------------T--GTGATTA----GTAATACACTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAA---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTAT--T--TT--GA-ATTATT-CGG-ATATCCATCTAGCT---C-TA-TAC---AATCTAA-TTAAAA---TCA-G-ATTC-TCT-----TT-CA-GCGT-T-ACA----T-TTTTCC--AGTG-TAA--------------------T--------------------
gi|19 : CCAGT-C-AATT--TGTCA-CAA-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-A--TAT-AATG-AAATTAA-T---GAA-A-T-AATAAA-AAATGT-TT-TACCAAAAAT-ATC-AGCG--T-AG-AAGTACT-T--TAA-TT--AAC--AATTCAAA--A--TA--A--CA----CATTTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-T---CGCAATAT-ACA-T-ACAG------T-Aggttataga
gi|2 : tCCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-C---G-CATTTA-CA-C-GT-T--GT-A--TAT-AATGGAAATTAA-TTTTGAATA-A-A--AAA-AAATG--TT-TACCAAAAAT-AT--AGCG--TTAGAAAGTACT-TCTTAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------T-AT-GAC-GAG-T-A--A-GATTTTC-TTG--AA-AC--AAAGT------CGTGA-AAAATTTTACTA-CAAC---TAAC--T-GA--T-GG-TTCCAAATG---ATAAA-TTTCTCT---ACT-TTG-C--ACTTA-C-TTT---TA-TCGT------T-ATGGTT-ACATTTGAA--TT------ATGA-T-T-ATCAA-AAAAA-T-GA--CG-TAA----A-TACAAAG-ATA---A--GGCTCA-GCTCATACT--CCAT-C--TTCCGG-TTACAATAAAGTT--ACT-------GTG------------------AATTT--T-CTA---T-AA-T------AAATTG-TTT---C-TTTTCC-CC-TGATT-A-----AT--TCTCCTTTT-GATAAAATA-TATTT-CA--GC-AAACAA-----C-T-T------T-TT-TATT------GTC-----------------C-------TTTACGTAATACAT--GTGATTATT--G-------CTGGAAGA--AGGGT--CACG---TC-AA-A-A-T---TTG---GG--T-ATG-GAAGTCTGTTTCGG-------G-TATTCATTTTAGAAT-ATAT--T--TT--GG-ATTATTCCGG-A--------TAGCT---C-TA-TAC---AATCTAA-T-TAAA---TCAGG-ATCC-TCT-----TT-AA-GCGT-T-ACA----CTTTTTCC--AGTG-TAATGGTTAGAGAAGATGTTATTT--------------------CT----ATTAA-GA---------------TTTAGC--TAG-GT-------------ACA-ATGGAAATTG---CATT-TATT-TTGTGG-AAA--TT----T-CTATTTGT-ATT--TT-G----GGAAT-A-----A-TA-CA---T------ATGATCTGTTCATT-TT-TTG-TG--CCT--TGA-CGAA----ACAAT-GTT-AAAA-GAAG--GGGG-GG-G-GGG---GGGGGGGGGAGATTAC-A-TTA-CAT---ATT--CA-----------TA-AAC------TTTCTTT-T-GC-GC-TTGCA---TCGTGAC-TAC-ATG-GATCTA--TTAA------TTA--T--AT-TTTATTACTACAT-G----------TAATATT--TTGT-T--CTTCATGATT-T-TGTTATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTCAGTTTGATTTT-A-TTTCT-GTTTTAATGA-----AT----ATAAGGTATTA-TT-TAA-T--A---CCAG-TACGGGGGAAAAAACAAT-TTTTGCAG-CAAGATATTTT--TTTCC-ACACAT-ATTGCTGCAT-TGTATACTGTACATG-TATACTTCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-G-----CGTGTTTTGA--AAGGTC---GC------CAA-ATT-AA-AACTA-TAC-A-------------------TAT-ACTCACCGTGTT-ATA-AAG--GGTTT---------------AAAAATTTTAAG-AGAA-CTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT---AACTGATT-A-TGA--------------TAT-------TACCGCTTTTGATGC-GTGC-TAGG---A---------T--AA-A--GT----G-ATTTCGTTTTCGCT-CCTTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTGTTTAAACCAAACCAT--------------TTCGCCC-TTCAGTGCAAAAC--ATTTTTTTAA-G-T-ACGGCCCTAGAAACGT-G-CAGG-ACTGTTCAA--TCCACATCGTG--A-TAAC-CGTAG-AAACATTCAGAACCG-C--G-CAA-T-ACATT-CGCT-ATCGGGTC-GGAAATGGAGCTA-----GGAAAGGT-GTAGAATTCAAAAAAAAATATTT---TAG-AATTA-------AAAAACTTTTGCAaa
gi|20 : -ATTC-TCT-----TT-AA-GTGT-T--CA----C-TTTTCC--AGTG-TAA--------------------TGGTTTTATAGAAGACG----TA----ATT-T-CA---------------TTTATCTCTAG-AT-------------ACA-ATGGAAATT----CA-T-TATT-TTGTGG--AATGTT--------------------TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CG-A----ACAAC-GTT-AAAG-AGGG--GGGGGGG-G-GGTGGGGGGGGGGGG----TAC-A-Tgataa
gi|22 : gaGATTATG-A--GATACC----CTGAAGC-GTGC-TA------TTA-TA-CCTTCAA-A--TC----G-G-TACG-TTT-GAT-TCATGGA-AATTG-TTCATTGTTCAGTGCAAACCGTTTCATaat
gi|23 : -AAAA-G--G--GGGG-GG-G-GG----GGGGGGGGG----CAC-A-GTA-AATTAAATT---A-----------CC-AGCCTAGGGTTTC-TT-T--T-GC--TACA-----GTGAC-C-C-AGGATA---A--TTAAC-----TTA-TGGAAT-CTCGTTACTacaaaaatcatttcctaaatctgcagatcgtttaag
gi|24 : acA-CAC---AATCTAG-TTTAAA---TCA-G-ATCC-TCT-----CT-TG-CCAT-T-ATACTACC-TTCTCC--AGTG-TAA--------------------T--------------------tccactgaggtaattcttgttc
gi|24 : -TA-TAC---AATCTAA-TTTTAA---TCA-G-ATCT-TCT-----CT-TA-CCAT-T-ACA----C-Tggtaagagaagatctgattaaaattagattgtatacttacaa
gi|25 : acacaatctagtttaaatcagatcctctcttgccattatactaccttctcc-TG-TAA---AATTTAA-TTAAAG---TGAAG-ATTT-TCTCAACCTT-AA-CGGT-T-GCA----C-TTCTCC--AGTG-CAA--------------------cttacaa
gi|3 : CCAGT-C-AATT--TGTCA-ATC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTCGATTT--AGC-A--T-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------T-AT-GAC-GAG-T-A--A-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCCCTAGCAAC---TAAC--T-GA--T-AA-TTCC-AGTG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-A-TTTG--TA-TCG-------T-ATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----A-TGCAAAG-ATATTTA--GTCTCGTA--CGTACT--CCAT-C--TTCCGG-TTACAATAAAGTT--ACTAGGCCTAGTG------------------AA--T--T-CTA---TGAA-T------AAATGT-TTT---C-TTTTCC-CT-TGATT-A-----ATA-GTTCCTTTT-G-AACATAA-TATTT-CG--GC-AAACAA-----C-T-T------TATA-AATT------GTA-----------------C-------T------------T--GTGAC------G-------CTGGAAGA--AGGGT--CACG--TTC-AA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTATAAT-TTA---T--TT--GG-ATTATT-CGG-A--------TAGCT---C-TA-TAT---GA--TAG-TCTAA------------CC-TCT-----TT-CA-GCGT-T-ACA----T-TTTCCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCA--AG-AT-------------TCA-ATGGAAATTA---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATGA-TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CAAA----ACAAC-GTT-AAAC-GATG--GGGGTGG-G-GGT---GGGGTGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-AC-TTGCA---T-GTGAC-TAC-ATG-TATTTA--TTAA------TTA-TC--AT-TCTATTACTAT--------------TA----C--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTAA-------TTT-A-TTTCT-GTTTTAATGA-----AT----AT----CATTA-TT-CAT-TA-A---GCAG-TACAA-----------AT-ATTT-CAG-CAAGATATTTT--TCCAA-ACACAT-AAT----CA--TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTTGCTGTG-TAA-TCTG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTA-TAC-A-TAC---ATG-TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AGG-AGAACCTAATT-T-TT---C-AGTATTGTT-CT-T---TTAAAAT-A-AACTGATT-A-TGT-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AATAC-GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTAATT---------------G--------------TTCG------CA----AAAAT--A-----TTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ATTGTTCAA--TCCACATTG-G--A-TTAC-C-TAG-AAACATTCAG-AC---T--G-CAA-T-ACATTCCGCT-ATTGGGTCTGAAAATGGAG--------GAAATTGC-TTAGAATTC-AAAAGAAATATTA---TAG-AATTACTTTTAGATAGACTTTTGCAcggtaagagaagctgattttaatta
gi|4 : CCTCA--GAA-AATTG-CAA-CAC-----A--AGT----TT-TACT-CT--GGCATTTA-CA-C-GT-T--GTTC--TAT-AATG-AATTAAA-T---GAA-A-T-A--A----------------------T-AT--AGTG--T-AGAAAGTCCCCT--TAA-TT--AAC--AATTCAAA--AT-TG--A--CA-----A-TTTTGATTT--ATC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------TTAT-GAC-GTG-T-A--A-GA--TTC-TTGCGAATAC-AAAAGT------CATGA-AAAATTTCACTAGCAA------AC--T-GA--T-GA-TTCC-AATG---AC-AG-TTTCTCTG--ACT-TTT-G--ACTTG-C-TTTG--TA-T-G-------T-AAGG-T-ACATT--AAATGT------ATGATT-T-ATCAACAAAAA-AAGA--CGCTAA----AT-ACAAA--ATATTGAA-GTCTCG-A--C-TACT--CCATTC--TTCCGG-TTAGAA-AAAGT----CTA---T--GTG------------------AA--T--TACTA---TAA--T------AA-TGT-TTT---TATTTTCCGCC-TGATTTA-----ATTGGCTTCTTTT-G-TACAAAA-TATTT-CG--GC-AAACG------C-T-T------TATC-AACT------GTAATTTA------------CGTTATAAT------------T--GTGATTA----G-------CTGGAAGA--GGG----CACG--TTCAAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTGTTTCGG-------G-TATTCATTTTCGAAT-TTAT--T--TT--GG-ATTATT-C-G-A--------TAGCT---C-TA-TAC---AATCTAA-T-TAAA---TCA-ATATCG-TCT-----TT-AA-GCGT-T--CA----T-TTTTCC--A-TGTTAA--------------------TGGTTAGATAAGATGTTATTGCA----ATT-A-GA---------------TTTGTC--TAG-AT--------------CA-ATGGACATTG---CC-T-TGTT-TAGTGG-GA--------------------ATG--TT-G----GGAATAAA---AA-TA-CA---TAAACAAATGGTCTG-TCATT-TT-TTG-TGGCCTT--TAA-CGAA----ACAAG-ATTAAAAA-GATG------------------CGGGGGAAA----TACAA-TTAGCAT---ATT--CATTC--------CACAAC-------TTC-GT-T-GT-GC-TTGCT---G-GTGACGTAC-ATG-TACATA--TTAA------TTA-TT--CT-TTTATTACTACAT-G----------TATT--T--TTGT-T--CTTCATGCTT--------TTGATTT-T-G-----TAG--TT--TAT-TTAGTTC---AT------TTTTAG------TTTGA-TTTC-----------A-----AT----AT----TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATA-TTT--TTCCACACACAT-A----------TGT-CA--GT----------T-TCAATGGAAATATTCTATATATT-AGTGGCTGTGTTGA-TCC--GC-ATTCGTG-CTTGA--AAGGT----GCAAAATTCAAGATTCAA-AA-TT-TAC-A-TATGTTAC--TATGTACCTATAACTCACCGTCTT-ATA-A----GG--T----------------AA------AAG-AG-ATCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-A--TGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGATTTGGACGC-GTG--TAGATC-ACTACCA-CCT---------T----G---T----TTTCGCT-CCGTGCA-GACCGATTTTTCGTTC-ATGC-AACCA-TTCATTG--------------G--------------TTCt
gi|5 : GC-C-AATTATTGTCA-ACCTAACCTCAA-GAA-AATTG-CAA-CAC-----A--AGGAGATTT-TA-TTCTTGG-CATTTA-CA-C-GT-T--GT-CATTAT-GATG-AATCAAA-T---GAA-A-T-AGAAAA-AAATG--TT-TACCCCAAA--ATC-AGCG--T-AGAAAGTACTAT--TAAATTCAAAC--AATTCAAA--AT-TA--A--CAAGACTA-TTTTGATTT--AGC-GAGC-GATTTAC-A-C-AC-TG-ACGC--T-T-ACA-T-ACAT------T-ATAAAC-GAT-T-A--AGGA--TTC-TTG--AA-AC--AAAGT------CATGATAAAATTATACTAGCAAC---T-AC--T-GAGTT-GATTTCT-AATGGATAC-AGTTTTCTCTAAAACTATTG-CAGACTTG-CATTTGGCTACTCG-------A-ATGG-TAACTTTTGAAATTTTTTGACATAATCAA-ATCAACAAAAATT-AA--CG-TAA----ATTACAAAGAATATTTA--GTCTCGTA--CGTACTCCCCAT-CTGTTCCGG-TT--GATAAAGTTAAACTT---CTATTGTATAACCGGAAGATTAGAAA--TAAT-CTATGTTGAA-TTCTGTAAAATGTATTTTCCC-TTTTCC-TCATGATT-ACTATTGT--GCCGCTTTTGG-TTCATAA-TATTTCCG--GCAAAACAA-----C-T-C------TATATAATT------GTAAATTTAACGTAATATCTC-------C------------T--GTGATTACACGG-------CTGGGAGG--AAGGTTACACGT-TTC-AACA-ATTAC-TAGAAAGGCTT-ATGCGAAGT-TG-TTCGGCATAATTGTTATTCA-ATTAGAAT-TTA---TTCTT--GGTATTATT-C-G-A--------TAGCT---CTTATTGC---GATCTAATTCTAAA---ATA-G-ATTCATCT-----TTATATGCGT-TAAGA----C-TTTTCC--AGTG-aaaacaagc
gi|5 : tA----ATT-ATAA---------------TTTATCTCTAGCAT-------------ACATAGGAAAATTGGAGCA-TATATTATTGTGGGAAATGTTATATT-GTATTTGT-ATGATTT-GTGCGGAAAT-AAGGACA-TA-AA---TT-----AAGATTGG-TCAAT-TT-CTGATGA-CCTGTTGA-CGAAGCTAACAGC-CTT-AAAA-AA------GATAG-GAGGT---GGGCAGGGA----TAC-AATTA-CAT---ATT--CAGTGATCTTCATCA-AAC------TTTC-TT-TTGC-GCCTTGCA---T-GTGAC-TA-------AGCTG--TTA--------TA-TC--ACACTTATTACTACCAGG----------TA----TAATTGT-T--CTTCATG-TT-T-TGATATTGATTTCT-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTgacatggttaagaagaagaataaatgttaagtcttcaaattataatttatctctagcatacataggaaaattggagcatatattattgtgggaaatgttatattgtatttgtatgatttgtgcggaaataaggacataaattaagattggtcaatttctgatgacctgttgacgaagctaacagccttaaaaaagataggaggtgggcagggatacaattacatattcagtgatcttcatcaaactttcttttgcgccttgcatgtgactaagctgttatatcacacttattactaccaggtataattgttcttcatgttttgatattgatttctgtagttttacttagttcatttttcagtttgcatttaattt
gi|6 : tgccaattattgtcaacctaacctcaagaaaattgcaacacaaggagattttattcttggcatttacacgttgtcattatgatgaatcaaatgaaatagaaaaaaatgtttaccccaaaatcagcgtagaaagtactattaaattcaaacaattcaaaattaacaagactattttgatttagcgagcgatttacacactgacgcttacatacattataaacgattaaggattcttgaaacaaagtcatgataaaattatactagcaactactgagttgatttctaatggatacagttttctctaaaactattgcagacttgcatttggctactcgaatggtaacttttgaaattttttgacataatcaaatcaacaaaaattaacgtaaattacaaagaatatttagtctcgtacgtactccccatctgttccggttgataaagttaaacttctattgtataaccggaagattagaaataatctatgttgaattctgtaaaatgtattttcccttttcctcatgattactattgtgccgcttttggttcataatatttccggcaaaacaactctatataattgtaaatttaacgtaatatctcctgtgattacacggctgggaggaaggttacacgtttcaacaattactagaaaggcttatgcgaagttgttcggcataattgttattcaattagaatttattcttggtattattcgatagctcttattgcgatctaattctaaaatagattcatctttatatgcgttaagacttttccagtggacatggttaagaagaagaataaatgttaagtcttcaACA--TTC-AA-ATG-TAAGTAG---GG--T-ATG-GCAGTCTG-TTCGG-------G-TATTCATTTTAGAATGTTA---T--TTTCGG-ATTATT-CGGGA--------TAGCTTTGC-TA-TATTATAATCTAA-TTAAAAAAATCA-GGATAC-TCT-----TT-CA-GCGTGT-ACA----C-TTTTTCGCAGTG-TAA--------------------C--------------------CA----ATT---GA---------------TTTATCA-TAG-AT-------------ACA-ATGGAAATTA---CA-T-TATT-TTG-GG-AAATTTT----TCCT-TTTGT-ATG--TTGG----GGAAT-AA---CA-TA-CA---TAATTA-ATGATATG-TCA-TGTT-GTG-TG--CCT--TGG-CAAA----ACAAT-GTT---AA-GATA--GGGGTGG-G-GGT----------------TAC-A-TTA-CAT---ATTTCCA-----------CA-TAC------------T-T-GC-A------A---T-GTGAC-TATAATG-TATCTA--TCAA------TTA-TTC-AT-TCTATAACTAT---T----------GA----C--TTGC-TG-CTTCATGTTT-T-CGATATTGATTT-T-G-----TAGT-TTTGTACTTTAGTTC---AT------TTTGA-------TTT-A-TTTCT-GTTTTAA-GA-----AT----AT----CATTA-TTACAT-TA-AAGGGCAG---CAG-----------AT-ATTT-CAG-CGAGGTATTTT--TTCCA-A-ACAT--------CGTATGTACA-TGT--A---TATGC-TCATTGGAAATATTCC-TATAGTAAGTTGCTGTG-TAACTCTG-GCAATTTGTG-CTTGAACAAGGTTCCGGCGGAATTCAA-ATTCAAGAACTT-TAC---------AT--TATGTACTAAT-ACTCACCGTGTTAATA-AAG--GG--TAAAAAGCTCGGGGTAAAA------AAG-AGAACCTGCTT-T-TTGTGCAAGTATTGTAGCT-TTGATTAAAAT-AGAACTGATT-AGTGA-ATGC--AATCGATTATG-AATTATA-CGACTTTGACGC-GTGTGTAGATTTACTA-CAGCCT--AA-AACGT----GAA-TTTG-TTTTGCT-CCGTGCA--ACCG-TTTTTTGTTCAATTCAAACCA-TTAATT---------------G--------------TTCGC-----TA----AAAGT--A-----TTAAGACT-A----CCTAGAAACGTGG-CA-G-ACTGTTCAAGGTCCACATTG-G--ATTGACGC-TAG-AAACATTCAG-ACCG-T--G-CAA-TGACATTCCGCTGATCGGGTCTGGAAATGGGG--------AAAATGGCATTAG---------------------------ATTACTTTTAAATAGACTTtcagtttgcatttaattt
gi|7 : CCAGT-CCAATT--TGTTA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTC-CA-C-GT-T--GT-T--TA--AATG-AAATTAA-T---GAA-A-G-A--GAA-AAAAGGTTT-TACCAAAATT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TG--C--CA----CA-TTTTGATTTTTAGCCG--CCGATTTAC-A-C-AC-TG-ACGC--T-TTCCA-T-ACAT------T-AT-GAC-GAG-T-ATAA-GG--ATC-TTG--AA--C-AAAAAT------CATGA-AACATTTCACTAGAAAC---TAAC--T-GA--TAGA-TTCC-AATG---AT-AG-TTTTTC----ACT-TTG-C--ACTTG-C-TTTG--TA-TCG-------TTATGG-T-ACATTTGAAATTT------ATGATT---ATCAACAAAAA-T-GA--CG-TAA----AT-ACAAAT-ATATTTAAAGTCTCG------TACT--CCAT-C--TTCCGGGTTACAATAAAGTT--GCTA------GTT------------------AA--T--T-CTA---CAAAAT------AATTGT-TGT---C-TTTTCC-CC-TGATT-A-----A---GTTCCGTTT-G-TACAAAAATATTT-CG--GC-AAACAA-----CAT-TATAAACTATA-AATTTACGTAATA-----------------C-------T------------T--GTGATTAC---G-------CTGGAAGA--A---------------------A-TAT-TAA---G---T-ATG-GAGGTATG-TTCGG-------G-TATTCATTTTAGAAT-TTA---T--TT-------------------------TGGCG---CGTA-TACC--AATCTAA-TCAAAA---TCA-G-ATCC-TCT-----TT----GC---------------TGGCT--GATG-TAA--------------------T---------------------G----GTG-A-GA---------------------G-AAG-AT-------------GTT-AT-----TTA---CA-T-TATT---------------------CT-TTTGT-ATG--TT-G----GGAAT-AA---CATTA-CA---T------ATGATCTG-TCA-T-CT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-TATG--GGGGGGG-G-GGG---GGGGGGG
gi|8 : tCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-CTAGAATTC--AAAAAAATATTT---TAG-AATC--------ATAGACTTTTGCA
gi|9 : -T-ATGACCCTAGAAACGT-GGCA-TTACTGTTCAA--TCCACAT---G--G-TTAC-C-TAG-GAACATTCAG-ACCG-CTCG-CAA-T-ACATTCCGCT-ATCGGGCCGTGAAC--------------GAATGGCCTTAGAATTC-AAAA--AATATTT---TAG-AATTACTTTTGGATAGACTTTTGCAgataatttgaacaaataatgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgattaaaatataaatataaaaatttagctcaaaaccgtgcattcatcgtctattaacagacagaatcaaacactagatgacattttaatgtaagctgtcaaagcatttcgaatgtctcatattacttttttcttctttcacagtgactaaataacaaacgatacttttaaaatcatgtcgttattcaatgtgttagtatttttcaatagaaaatagttatatcttggaacatatttagaggaatgcccatgattcgtaaccaaagcaaaaccacatttataaaatataacatcatttttctaatacttgcacgaattaagatgcaaatatctccgtagccattgcaatggagaggtatgaaaagatg
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): AAAAACCCAAAATTAATATTTAGCTCAAAAACGTGTACCATGTCCTTTAAACAGACCAGAACAAAATCAGATGCATTTTGTAGCTGATCAAAAAGAAATATTGAATGCCTCAACTCTTTTTCTATCTTTCACAGTGCAAATATACAAAACTAACTTTTAAAAATCGTGCTTCGTTATCATGGGTATTGTTTTACATAAGAACTGTTTATCGAACTATTCTTAGAGGAATCCACTGGCATCTAAGCAAAGGCCAATTTATGAAAATAACCATTATTAAAAGAAACAACAGTTTAACTTGCCACAAAAAACACCGCCGTAGCCAATTGGAGACGCTATTTTGAAAAGACG
Unaligned ( gi|15 ): AGAACAAAACCAGATATGCATTTGTTAGCTGTCAAAGCAATTGAATGTCCTCTATTACTTTTTCTATCTTTCACAGTGCAAATATTACAAACGATACCTTTTATAAAATTCATGTTTCGTTATTCAATGTGTATTTGTTTTCAATAAAAAAATTGTTTAATCTGAACCTATTAGAGGAATCCATGGCATTCTAAGCCAAAGCCCACATTATAAAAATTAACCATATTTAACTTGTCAACAGAATTAAGATGCCAAAAACTCCGTAGCCATGCAATGGAGACGTATGAAGAGAT
Unaligned ( gi|16 ): AACAAAAACAGATACATTTTTAGCTGTCAAAGCAATTTGAAATGTCCCTCAACTACTTTTTCTATCTTTCACAGTGCAAATATACAAACGATACTTTTAATAAATCGTGTTTCGTTAATCAATGGGTATTGTTTTCAAAAGAAATGTTTATCGGAACTATTTGGAGGAATCCATGGCATTCTAAGCAAAGCCCACATTTATAAAAATAACCATATTAAAGAAACGACAGTTTTAACTTGCCACAGAAGATGCAAAAATCGCCGTAGCCAATGGAGACGTATGAAAAGATG
Unaligned ( gi|18 ): AGCTGTCAAAGGCAATATTGACCTTCTCTACTACTTTGTTCTATCTTCACAGTGCAAATATACAAAACGATTACTTTTTAATAATCATGATGTTCGTTACAGGTATTGTTTTCATAAAAAAATAGTATCTGAACTAATGAAATCAGAGGAATCCGATGGCCATTCTAAGCAAAACGCCCACATTTTATAACAATTAACCATATTTTAACTTGCCAACCCAGAAATCTTCGAAGCCATGCAATGGAGCACGTTTATGAAA
Unaligned ( gi|21 ): AGACAGAACAAAAGCAGACATGCATTTGGATGCTGTCAAAAGGCAACTTTGAATGTCGCTCTGTAAAACTTTTTCTATCTATTTCACAGTGCCAAAATATTATTAACGATACTTTTTGAAATCTTGTTTCGTGTATTCAATGGGTATTGTTTTCTTTAAAAAAAAA
Unaligned ( gi|26 ): AGATCTTCTGTAACCTTTACACTAGTTCCCCAGTGTTATGGTTAGAGAAGACCTGGCTTTAATTACATGTACCTATGTACATTG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111
lowQualScore : 11111 1111 111111 11 11 11 11 11 111111 11 11 111111 111 3333333 333333 1 222222 11111 333333 6666666666666666666666666666666666 222222222222222 11111 22222222222 111111 44444444444444444444444444444444444444444444444 33333333333333 11 111 111 1 1111111 1 11111111 111 11 0000000000000000000000000000000000000000000000000000000000000000000000 222 22222222222222 1111 44444444444444444 11 1111 333333 1 1 11 1111 1111 1111 44444444444 1111111 11111 11 111111 11 66666666666666666666666 11 1111111 111 111111 2222222 1 11111 3333333333 111 333333333333 1 444444444444 3333333333 111 1 5555555555555 444444444444444444444444 111 1 11111 111 22222222222222222222222222222222 111111111111111111111111111111 11111 44444444 1 111 11 1111 1111 33333333 1 111 1111111
lowQualScore : 5 5 66 5 5 4 4 4 4 11111 66 9999 4 4 4 66 8 4 4 4 4 66 9999 4 4 4 777 4 444444 4 00 4 4 55 66 4 8 22 4 66 00 66 4 88888 9999 4 66 66 4 00 4 4 4 4 4 00 4 1 4 4 222222 4 5 5 11 5 5 66 5 66 5 44 444444 5 888 0 66 5 66 5 5 5 888 5 5 555 5 5 77 5 5 77 5 0000000 999 3 000000 99999 888 99 3 000000 99 77777 6 111111 3 99 6 99 6 1111111111111111111111111111111111 99999 6 111111111111111 1 5 77777 5 5 88888888888 5 5 5 5 77 5 444444 5 1 5 22222222222222222222222222222222222222222222222 77 77777777777777 888 0 33 222 5 111 99 888 66 5 5 0 6666666 5 5 66 5 5 5 0 2 5 88888888 333 4 3 666 44 7 555 999 3 77777 11 3 3 55 6666 3 55 3 8888888888888888888888888888888888888888888888888888888888888888888888 333 5 99999999999999 55 1111 5 5 5 0 44444444444444444 5 11 5 0000 5 888 5 5 888 111111 0 5 5 5 5 11 66 5 0000 5 4 4 7777 9 4 4 3333 3333 555 5 888 66 66666666666 5 9999999 5 5 5 5 55 33333 5 55 11 2 66 999999 5 11 5 0 22222222222222222222222 5 33 3 999 22 5 5555555 5 77 5 000 666666 1 8888888 6 6 6 0 66666 5555555555 6 6 6 6 111 6 222222222222 6 3 6 1 99 99 222222222222 0000000000 6 5 5 5 5 5 22 5 77 000 0 5 5 5 7777777777777 1 5 5 5 77 77 333333333333333333333333 5 5 5 000 1 5 55555 222 5 5 5 5 77 5 3 5 66 5 5 55555555555555555555555555555555 1 5 6 5 5 5 5 5 888888888888888888888888888888 44444 6 11111111 6 5 5 1 0 3 6 888 0 11 0 999 3333 1 8 8 8 8 5555 8 8 8 6 3 1 55555555 3 99 5 111 6 4444444
lowQualScore : . . .. . . . . . . ..... .. .... . . . .. . . . . . .. .... . . . ... . ...... . .. . . .. .. . . .. . .. .. .. . ..... .... . .. .. . .. . . . . . .. . . . . ...... . . . .. . . .. . .. . .. ...... . ... . .. . .. . . . ... . . ... . . .. . . .. . ....... ... . ...... ..... ... .. . ...... .. ..... . ...... . .. . .. . .................................. ..... . ............... . . ..... . . ........... . . . . .. . ...... . . . ............................................... .. .............. ... . .. ... . ... .. ... .. . . . ....... . . .. . . . . . . ........ ... . . ... .. . ... ... . ..... .. . . .. .... . .. . ...................................................................... ... . .............. .. .... . . . . ................. . .. . .... . ... . . ... ...... . . . . . .. .. . .... . . . .... . . . .... .... ... . ... .. ........... . ....... . . . . .. ..... . .. .. . .. ...... . .. . . ....................... . .. . ... .. . ....... . .. . ... ...... . ....... . . . . ..... .......... . . . . ... . ............ . . . . .. .. ............ .......... . . . . . . .. . .. ... . . . . ............. . . . . .. .. ........................ . . . ... . . ..... ... . . . . .. . . . .. . . ................................ . . . . . . . . .............................. ..... . ........ . . . . . . . ... . .. . ... .... . . . . . .... . . . . . . ........ . .. . ... . .......
lowQualScore : 0 0 99 0 0 4 4 4 4 11111 11 4444 4 4 4 11 9 4 4 4 4 11 7777 4 4 4 888 4 111111 4 66 4 4 66 11 4 9 22 4 11 66 11 4 66666 4444 4 11 11 4 66 4 4 4 4 4 66 4 1 4 4 888888 4 0 0 99 0 0 99 0 99 0 44 444444 0 888 1 99 0 99 0 0 0 888 0 0 777 7 7 99 7 7 99 7 0000000 444 2 888888 55555 777 22 3 777777 22 00000 7 777777 7 22 7 22 7 0000000000000000000000000000000000 33333 7 888888888888888 7 7 33333 7 7 33333333333 7 7 7 7 99 7 444444 7 7 7 77777777777777777777777777777777777777777777777 99 11111111111111 000 7 66 000 0 111 55 888 99 0 0 0 2222222 0 0 99 0 0 0 0 5 0 11111111 888 0 6 444 66 5 888 333 1 77777 22 1 1 88 5555 1 00 6 4444444444444444444444444444444444444444444444444444444444444444444444 111 0 88888888888888 44 0000 0 0 0 1 11111111111111111 0 99 0 6666 0 888 0 0 888 999999 0 0 0 0 0 99 99 0 6666 0 4 4 1111 9 4 4 9999 9999 333 0 888 99 99999999999 0 5555555 0 0 0 0 11 99999 0 11 11 0 99 444444 0 99 0 4 33333333333333333333333 7 66 0 444 66 7 7777777 7 99 7 000 444444 0 3333333 7 7 7 5 77777 0000000000 7 7 7 7 777 7 777777777777 7 3 7 7 22 88 555555555555 7777777777 7 7 7 7 7 7 99 7 99 000 1 7 7 7 9999999999999 4 7 7 7 99 99 666666666666666666666666 7 7 7 000 4 7 99999 999 7 7 7 7 99 7 1 0 99 0 0 55555555555555555555555555555555 7 7 6 7 7 7 0 7 555555555555555555555555555555 22222 7 55555555 7 7 7 7 7 3 7 333 8 00 8 444 0000 0 0 0 0 0 4444 0 0 0 7 2 5 88888888 3 88 7 777 7 2222222
consensus : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----ATTACAAAG-ATATTT--A-GTCTCG-A--CGTACT--CCAT-C--TTCC-GGTTACAATAAAGTT--ACTA---CTAGTG------------------AA--T--T-CTA---T-AAAT------AAATGT-TTT---C-TTTTCC-CC-TGATT-A-----AT--GCTCCTTTT-G-TAC-AAAATATTT-CG--GC-AAACAA-----CT-TTATA-AATTGT----------A---------------TT---------C---------TT--GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCA-G-ATCC-TCT-----TT-NA-GCGT-T-ACA----C-TTTTCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCG-TAG-AT-------------ACA-ATGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTAC---G----------TA----T--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G--------------TTCGCCC-TTCAGTGCAAAAT--A----TTTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
Reference ( family-546 ) : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCG-------TATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----ATTACAAAG-ATATTT--A-GTCTCG-A--CGTACT--CCAT-C--TTCC-GGTTACAATAAAGTT--ACTA---CTAGTG------------------AA--T--T-CTA---T-AAAT------AAATGT-TTT---C-TTTTCC-CC-TGATT-A-----AT--GCTCCTTTT-G-TAC-AAAATATTT-CG--GC-AAACAA-----CT-TTATA-AATTGT----------A---------------TT---------C---------TT--GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAAT--TNAAA---TCA-G-ATCC-TCT-----TT-NA-GCGT-T-ACA----C-TTTTCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCG-TAG-AT-------------ACA-ATGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTAC---G----------TA----T--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G--------------TTCGCCC-TTCAGTGCAAAAT--A----TTTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
gi|1 : -C-AATT--TGTCA-ACC-AACCTCAAAGAACAATTGGCAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-CCGTGT--AT-T--TAT-AATG-AAAATTA-T---GAA-ACT-A--AAACAAATG--GCGTACCAAAATT-AGC-CGC---T-AGAA-TTACC-TACTAA-TT--AAC--AATTCAAACGAT-TA--AGCCA----CT-TCTTGA--TTT--AG-CG--CGATT-AC-A-CCAC-TGGACGC--T-TCCAAT-ACATGCCCCAT-AT-GAC-GAG--TCAA-GA--TTCCTTG--AA-ACAAAAAGT------CGTG--AAAATTTTACTAGCACA---TAAC--TGGA--T-GG--TCC-AATG---AT-AA-TTTCTCT---ACT-TTA-C--ACTTACC-TTTG--TA-TCGTATACAATATGG-T-ACATTGAAAATTTTAG---ATGATT-TCATCAACAAAAA-T-GACCCGCTAAATTTATTACAAAG-ATA--C--A-GTCT------CATACT--CCAT-C--TTCC-GGTTACAATAAA-TT--ACTA---GTA-TA------------------AA--T--T-TTA---T-AAA-------AAATGT-TTT---CTTTTTCC-CC-TGAT---------T--GCTCCTTCT-G-TAC-AAAATATTT-CGGCGC-AAACAAGCAATCTATTTTA-AATTGT----------A--------------------------C---------TTAAGTAAT------G-------CTGGAAGATCGGGGTC-CACGATTTCAA-A-T-TG--TAG---GG--TCATG-AAGGTCTG-TATTG-------G-TATTCATTTTAGAAT-ATAGTTC-TT-GG-ATTATCGTGG-A--------T-GCTC--C-TA-TAC----ATTTAAT--TAAAA---TCA-GAATCC-TCT-----TTCAA-GCGT-T-ACA----C-TTTTCC--AGTG--AA--------------------C--------------------TACATGGTT-A-GAGAAACAGAATGTTATTTCATAG-TAG-ATTAGCTAGGGTTAAAC--GTGGAAATTG---CA-T-TATT-TTGTGG--AATG--------CT-TTTGTGATG--TT-T----GGAAT-AA---CA-TACCATACT------ATGATCTGATCA-T-TTCTTG-TG--CCT--TGACCGAA----ACAATGGTT-AAAAGGATAACGAGATGGCT-GAC---GGGGGGGGAC---TAC---TTA-CAT---ATT--CA-----------TA-ATC------TTTC-TTCT-GCGGC-TGGCACTGT-GCGAA-TAC--TG-GATCTATTTTAAAATATGTCA-TT--AT-TTTATTACTAC---GCGCTTATAATTA----T--TTGTCT--CTTCATGCTTATATGTTATTGATTT-TCGTAAGCTAGTATT--TAC-TTAGTTTCTAAT------TTTCA-------GTT-ATTTTCTGGTCTTTACAA-----ATGA--ATA---TATTATTT-CATATATA---GCAGTTACA------------AC-ATCTGCAGACAAGATACTTTTATTTC--ACACATAA------CAT-TGTATG-TAT--ATGCTCAAC-TCATTGAAAA-A-TCC-TATAGT-AGTGGGT-TG-TGA-TACGCGCA----GTG---TGA--AAAGTC---GC-AAACT-----TTCAA-AACTTATACAA-AA----AT--TA------TAC-ACTCACCATGTT-ATACAAGCAGG--T---------------AAAC-----AAGAAGAACCTAATT-TCTT---CAAGTATTGTA-CTAT---TGAAAATAA-AACTGATT-A-TGAGAT-C--AA-CG--TGTGAA--TATACCGACTTTGACGCGGTGC-TAGA--TA------------AA-A--GT----G-A-TTCG-TTT-GCTCCCGTGCAGGACCG---TTTCGTTCAA-GC-TATCA-TTCATTA--------------GTTTAAACCAAACCATTCGCCCTTTCAGTGCAAAAT--ACT--TTTAA-G-T-ACGG-CCTATAAACGT-G-CA-G--CTGTTC----TCC-CATCG-GAAA-TAAC-C-TAGAAAACAGTCAG-ACCGCC--GCCAATT-ACATTCCGCT-ATCAG---TGGAAATGGCGGGCACTCAGGGATGGC-TTAGAATTC-AAACAAATTATTTTTATAGAAATTA
gi|10 : tcGGGGGA----TAC-A-TTA-CAT---ATT--CATATTCA-----CA-AAA------CTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG--ATCTA--TTAA------TTAATT--AT-TTCAG-ATTAA---A----------TA----T--TTGT-TGTTTTCATGCTT-T-T-ATATTGATTT-TTG-----TAAT-TT--TAC-TTAGTTT---ATCTTCAGTTTGA-------TTT-A-TTTCT-GTTTTAATGACTATTATTGTTATG---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------ATTACTG-CAG-CAAGATATTTT--TTCCA--CACAT-A------TAT--GTACA-T-----T--TATAC-TCATTGGAAATATTTC-TATAGT-AGTGGCTGTG-TAA-TCCG-ACAATTCGTG-CTTGA--AAGGTC---GCCAAATTCAA-AGTCAG-AACTT-TAC-ATTAC---ATTGTATGTACCTAT-AC-CACCGTGTT-ATA-AAG--GG--TA--------------AAA------AAG-AGAACCTAATTGT-TT---C-AGT----TA-CT-TG--CT---------ACTGTTTAA-TGA-AT-CTAAA-CGCTTATG-A--TATACCGACTTTGACGA-GTGC-TAGATCTACTA-tcatactttctgcacgataattgaacaaaataat
gi|10 : AGTGCTAGATCTA----CTAAAGG-TTATGACCCTAGAAACGTGG-CATT-ACTGTTaaggttatgaccctagaaacgtggcattactgtt
gi|11 : gggggatacattacatattcatattcacaaaacttctttgcgcttgcatgtgactacatgatctattaattaattatttcagattaaatatttgttgttttcatgcttttatattgatttttgtaattttacttagtttatcttcagtttgatttatttctgttttaatgactattattgttatgtattattcattaagcagtacagattactgcagcaagatattttttccacacatatatgtacatttatactcattggaaatatttctatagtagtggctgtgtaatccgacaattcgtgcttgaaaggtcgccaaattcaaagtcagaactttacattacattgtatgtacctataccaccgtgttataaagggtaaaaaagagaacctaattgtttcagttacttgctactgtttaatgaatctaaacgcttatgatataccgactttgacgGT-C-AATT--TATCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AG------T-TA-T-CT--GCCATTTAGCACC-GT-T--GTCC--TATAAATG-ACATTAA-T---GAA-A---A--TAA-AAATG--TT-TACCAAAAAT-ATCAAGCG--T-AGAAAGTACT-T--TAA-TT--AACA-AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT---T-CG--CG-CTTAC-ATC-ACTTG-ACGC--T-TCCA-TAACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-AC--AAAGT------CATGA-AAAATTTCACTAGCAAC---TAACGTT-GA--T-GA-TTCC-AATG----T-AG-TTACTCT---ACT-TTGCC--ACTTG-C-TTTG--TG-TCG-------TATGG---ACATT
gi|13 : ATTCC-AATAGT-AGTGGCTGTG-TAA-TCCA-GCAATTCGTG-CTTGA--AATGTC---GTGAAATTCAA-TTTCAA-AACTT-TAC-A-----------TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATG-T-TT---C-AGTATTGTA-C--G---TTAAAAT-A-AACAGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCAACTTTGACGA-GTGC-TAGATTTACTT-CA-CCT--AA-A--ATGTCGG-A-TTCG-TATCGCT-CCGTGCA-GACTG-TTTTTCGTTCAGTGCAAACCA-TTCATTGTTTAAACCAGACC-G--------------TTTGCCC-TTCAGTGCAAAAT--A-----TTAAGG-T-ACGGCCCAAGatcataaaatcattaaacaatcataataagtttaattaacaattaagaaaactaaattcatgaaaattgtttaa
gi|14 : CCAGTTC-TAAT--TGTCATACC-A-CCTCAA-GAA-AATTG-CAATCACTTTTTAGTAGG----TTGTA-T-CT--C-CATTTA-CA-C-GT-TTCGT----TAT-AATG-AAATTAAAT---GAA-A-TGA--AAA-AAATG--TT--ACCAAAAATTATC-AGCGCGT-AGAAAGTACT-T--TAA-TT--AACAAAATTCAAA--ATGTACTC--CA----CA-TTTTGA--TTTTAAG-CG--CGATTTACAA-C-AC-TG-GCGC--T-T-CA-T-ATGT------T-AT-GACTAAGT-T-AA-GA--TTC-TTG--AA-GA-AATAGTACATGACATGA-AACATTTCACTAGCAACTAATAAC--T-GC--T-GA-TTCC-AATG---AC-AG-TTT
gi|17 : t------AAATAT-TTC---A-TTTTCC-CC-GGATT-A-----ATC-GCTCCATTT-T-TAC-AAAATATTT-CG--GC-AAACTG-----CT-TTAGA-AATTGT----------AGAT------------TTACGTAATA-C---------TT--GTGATTA----GTAATACACTGGAAGA--AGGGT--CACG--TTCAA-A-A-TAC-TAA---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GA-ATTATT-CGG-ATATCCATCTAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCA-G-ATTC-TCT-----TT-CA-GCGT-T-ACA----T-TTTTCC--AGTG-TAA--------------------T--------------------
gi|19 : CCAGT-C-AATT--TGTCA-CAA-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-A--TAT-AATG-AAATTAA-T---GAA-A-T-AATAAA-AAATGT-TT-TACCAAAAAT-ATC-AGCG--T-AG-AAGTACT-T--TAA-TT--AAC--AATTCAAA--A--TA--A--CA----CATTTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-T---CGCAATATACA-T-ACAG------T-Aggttataga
gi|2 : tCCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-C---G-CATTTA-CA-C-GT-T--GT-A--TAT-AATGGAAATTAA-TTTTGAATA-A-A--AAA-AAATG--TT-TACCAAAAAT-AT--AGCG--TTAGAAAGTACT-TCTTAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GATTTTC-TTG--AA-AC--AAAGT------CGTGA-AAAATTTTACTA-CAAC---TAAC--T-GA--T-GG-TTCCAAATG---ATAAA-TTTCTCT---ACT-TTG-C--ACTTA-C-TTT---TA-TCGT------TATGGTT-ACATTTGAA--TT------ATGA-T-T-ATCAA-AAAAA-T-GA--CG-TAA----A-TACAAAG-ATA-----A-GGCTCA-GCTCATACT--CCAT-C--TTCC-GGTTACAATAAAGTT--ACT-------GTG------------------AATTT--T-CTA---T--AAT------AAATTG-TTT---C-TTTTCC-CC-TGATT-A-----AT--TCTCCTTTT-GATAA-AATATATTT-CA--GC-AAACAA-----CT-TT-TT-TATTGTCCTTTACGTAA---------------TA---------C---------AT--GTGATTATT--G-------CTGGAAGA--AGGGT--CACG---TCAA-A-A-T---TTG---GG--T-ATG-GAAGTCTGTTTCGG-------G-TATTCATTTTAGAAT-ATA--TT-TT-GG-ATTATTCCGG-A--------TAGCT---C-TA-TAC---AATCTAAT--T-AAA---TCAGG-ATCC-TCT-----TT-AA-GCGT-T-ACA----CTTTTTCC--AGTG-TAATGGTTAGAGAAGATGTTATTT--------------------CT----ATTAA-GA---------------TTTAGC--TAG-GT-------------ACA-ATGGAAATTG---CATT-TATT-TTGTGG-AAA--TT----T-CTATTTGT-ATT--TT-G----GGAAT-A-----A-TA-CA---T------ATGATCTGTTCATT-TT-TTG-TG--CCT--TGA-CGAA----ACAAT-GTT-AAAA-GAAG--GGGG-GG-G-GGG---GGGGGGGGGAGATTAC-A-TTA-CAT---ATT--CA-----------TA-AAC------TTTCTTT-T-GC-GC-TTGCA---TCGTGAC-TAC-ATG-GATCTA--TTAA------TTA--T--AT-TTTATTACTACAT-G----------TAATATT--TTGT-T--CTTCATGATT-T-TGTTATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTCAGTTTGATTTT-A-TTTCT-GTTTTAATGA-----AT----ATAAGGTATTA-TT-TAA-T--A---CCAG-TACGGGGGAAAAAACAAT-TTTTGCAG-CAAGATATTTT--TTTCC-ACACAT-ATTGCTGCAT-TGTATACTGTACATG-TATACTTCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-G-----CGTGTTTTGA--AAGGTC---GC------CAA-ATT-AA-AACTA-TAC-A-------------------TAT-ACTCACCGTGTT-ATA-AAG--GGTTT---------------AAAAATTTTAAG-AGAA-CTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT---AACTGATT-A-TGA--------------TAT-------TACCGCTTTTGATGC-GTGC-TAGG---A---------T--AA-A--GT----G-ATTTCGTTTTCGCT-CCTTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTGTTTAAACCAAACCAT--------------TTCGCCC-TTCAGTGCAAAAC--ATTTTTTTAA-G-T-ACGGCCCTAGAAACGT-G-CAGG-ACTGTTCAA--TCCACATCGTG--A-TAAC-CGTAG-AAACATTCAGAACCG-C--G-CAA-T-ACATT-CGCT-ATCGGGTC-GGAAATGGAGCTA-----GGAAAGGT-GTAGAATTCAAAAAAAAATATTT---TAG-AATTA-------AAAAACTTTTGCAaa
gi|20 : -ATTC-TCT-----TT-AA-GTGT-T--CA----C-TTTTCC--AGTG-TAA--------------------TGGTTTTATAGAAGACG----TA----ATT-T-CA---------------TTTATCTCTAG-AT-------------ACA-ATGGAAATT----CA-T-TATT-TTGTGG--AATGTT--------------------TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CG-A----ACAAC-GTT-AAAG-AGGG--GGGGGGG-G-GGTGGGGGGGGGGGG----TAC-A-Tgataa
gi|22 : gaGATTATG-A--GATACC----CTGAAGC-GTGC-TA------TTA-TA-CCTTCAA-A--TC----G-G-TACG-TTT-GAT-TCATGGA-AATTG-TTCATTGTTCAGTGCAAACCGTTTCATaat
gi|23 : -AAAA-G--G--GGGG-GG-G-GG----GGGGGGGGG----CAC-A-GTA-AATTAAATT---A-----------CC-AGCCTAGGGTTTC-TT-T--T-GC--TACA-----GTGAC-C-C-AGGATA---A--TTAAC-----TTA-TGGAAT-CTCGTTACTacaaaaatcatttcctaaatctgcagatcgtttaag
gi|24 : acA-CAC---AATCTAGT--TTAAA---TCA-G-ATCC-TCT-----CT-TG-CCAT-T-ATACTACC-TTCTCC--AGTG-TAA--------------------T--------------------tccactgaggtaattcttgttc
gi|24 : -TA-TAC---AATCTAAT--TTTAA---TCA-G-ATCT-TCT-----CT-TA-CCAT-T-ACA----C-Tggtaagagaagatctgattaaaattagattgtatacttacaa
gi|25 : acacaatctagtttaaatcagatcctctcttgccattatactaccttctcc-TG-TAA---AATTTAAT--TAAAG---TGAAG-ATTT-TCTCAACCTT-AA-CGGT-T-GCA----C-TTCTCC--AGTG-CAA--------------------cttacaa
gi|25 : TAAT--TAAAA---TCA-G-CTTC-TCT-----T---A-CCGT-T-GCA----C-Tcggtaagagaagctgattttaatta
gi|3 : tgtaaaatttaattaaagtgaagattttctcaaccttaacggttgcacttctccCCAGT-C-AATT--TGTCA-ATC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTCGA--TTT--AG-CA--TGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCCCTAGCAAC---TAAC--T-GA--T-AA-TTCC-AGTG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-A-TTTG--TA-TCG-------TATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----A-TGCAAAG-ATATTT--A-GTCTCGTA--CGTACT--CCAT-C--TTCC-GGTTACAATAAAGTT--ACTAGGCCTAGTG------------------AA--T--T-CTA---T-GAAT------AAATGT-TTT---C-TTTTCC-CT-TGATT-A-----ATA-GTTCCTTTT-G-AAC-ATAATATTT-CG--GC-AAACAA-----CT-TTATA-AATTGT----------A--------------------------C---------TT--GTGAC------G-------CTGGAAGA--AGGGT--CACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTATAAT-TTA---T-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAT---GA--TAGT--CTAA------------CC-TCT-----TT-CA-GCGT-T-ACA----T-TTTCCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCA--AG-AT-------------TCA-ATGGAAATTA---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATGA-TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CAAA----ACAAC-GTT-AAAC-GATG--GGGGTGG-G-GGT---GGGGTGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-AC-TTGCA---T-GTGAC-TAC-ATG-TATTTA--TTAA------TTA-TC--AT-TCTATTACTAT--------------TA----C--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTAA-------TTT-A-TTTCT-GTTTTAATGA-----AT----AT----CATTA-TT-CAT-TA-A---GCAG-TACAA-----------AT-ATTT-CAG-CAAGATATTTT--TCCAA-ACACAT-AAT----CA--TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTTGCTGTG-TAA-TCTG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTA-TAC-A-TAC---ATG-TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AGG-AGAACCTAATT-T-TT---C-AGTATTGTT-CT-T---TTAAAAT-A-AACTGATT-A-TGT-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AATAC-GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTAATT---------------G--------------TTCG------CA----AAAAT--A-----TTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ATTGTTCAA--TCCACATTG-G--A-TTAC-C-TAG-AAACATTCAG-AC---T--G-CAA-T-ACATTCCGCT-ATTGGGTCTGAAAATGGAG--------GAAATTGC-TTAGAATTC-AAAAGAAATATTA---TAG-AATTACTTTTAGATAGACTTTTGCA
gi|4 : CCTCA--GAA-AATTG-CAA-CAC-----A--AGT----TT-TACT-CT--GGCATTTA-CA-C-GT-T--GTTC--TAT-AATG-AATTAAA-T---GAA-A-T-A--A----------------------T-AT--AGTG--T-AGAAAGTCCCCT--TAA-TT--AAC--AATTCAAA--AT-TG--A--CA-----A-TTTTGA--TTT--AT-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------TTAT-GAC-GTG--T-AA-GA--TTC-TTGCGAATAC-AAAAGT------CATGA-AAAATTTCACTAGCAA------AC--T-GA--T-GA-TTCC-AATG---AC-AG-TTTCTCTG--ACT-TTT-G--ACTTG-C-TTTG--TA-T-G-------TAAGG-T-ACATT--AAATGT------ATGATT-T-ATCAACAAAAA-AAGA--CGCTAA----AT-ACAAA--ATATTG--AAGTCTCG-A--C-TACT--CCATTC--TTCC-GGTTAGAA-AAAGT----CTA---T--GTG------------------AA--T--TACTA---T-AA-T------AA-TGT-TTT---TATTTTCCGCC-TGATTTA-----ATTGGCTTCTTTT-G-TAC-AAAATATTT-CG--GC-AAACG------CT-TTATC-AACTGT----------AA--------------TT---------TACGTTATAATT--GTGATTA----G-------CTGGAAGA--GGG----CACG--TTCAA-A-AATAC-TAG---GG--T-ATG-GAAGTCTGTTTCGG-------G-TATTCATTTTCGAAT-TTA--TT-TT-GG-ATTATT-C-G-A--------TAGCT---C-TA-TAC---AATCTAAT--T-AAA---TCA-ATATCG-TCT-----TT-AA-GCGT-T--CA----T-TTTTCC--A-TGTTAA--------------------TGGTTAGATAAGATGTTATTGCA----ATT-A-GA---------------TTTGTC--TAG-AT--------------CA-ATGGACATTG---CC-T-TGTT-TAGTGG-GA--------------------ATG--TT-G----GGAATAAA---AA-TA-CA---TAAACAAATGGTCTG-TCATT-TT-TTG-TGGCCTT--TAA-CGAA----ACAAG-ATTAAAAA-GATG------------------CGGGGGAAA----TACAA-TTAGCAT---ATT--CATTC--------CACAAC-------TTC-GT-T-GT-GC-TTGCT---G-GTGACGTAC-ATG-TACATA--TTAA------TTA-TT--CT-TTTATTACTACAT-G----------TATT--T--TTGT-T--CTTCATGCTT--------TTGATTT-T-G-----TAG--TT--TAT-TTAGTTC---AT------TTTTAG------TTTGA-TTTC-----------A-----AT----AT----TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATA-TTT--TTCCACACACAT-A----------TGT-CA--GT----------T-TCAATGGAAATATTCTATATATT-AGTGGCTGTGTTGA-TCC--GC-ATTCGTG-CTTGA--AAGGT----GCAAAATTCAAGATTCAA-AA-TT-TAC-A-TATGTTAC--TATGTACCTATAACTCACCGTCTT-ATA-A----GG--T----------------AA------AAG-AG-ATCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-A--TGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGATTTGGACGC-GTG--TAGATC-ACTACCA-CCT---------T----G---T----TTTCGCT-CCGTGCA-GACCGATTTTTCGTTC-ATGC-AACCA-TTCATTG--------------G--------------TTCt
gi|5 : GC-C-AATTATTGTCA-ACCTAACCTCAA-GAA-AATTG-CAA-CAC-----A--AGGAGATTT-TA-TTCTTGG-CATTTA-CA-C-GT-T--GT-CATTAT-GATG-AATCAAA-T---GAA-A-T-AGAAAA-AAATG--TT-TACCCCAAA--ATC-AGCG--T-AGAAAGTACTAT--TAAATTCAAAC--AATTCAAA--AT-TA--A--CAAGACTA-TTTTGA--TTT--AG-CGAGCGATTTAC-A-C-AC-TG-ACGC--T-TACA-T-ACAT------T-ATAAAC-GAT--T-AAGGA--TTC-TTG--AA-AC--AAAGT------CATGATAAAATTATACTAGCAAC---T-AC--T-GAGTT-GATTTCT-AATGGATAC-AGTTTTCTCTAAAACTATTG-CAGACTTG-CATTTGGCTACTCG-------AATGG-TAACTTTTGAAATTTTTTGACATAATCAA-ATCAACAAAAATT-AA--CG-TAA----ATTACAAAGAATATTT--A-GTCTCGTA--CGTACTCCCCAT-CTGTTCC-GGTT--GATAAAGTTAAACTT---CTATTGTATAACCGGAAGATTAGAAA--TAAT-CTATGTT-GAATTCTGTAAAATGTATTTTCCC-TTTTCC-TCATGATT-ACTATTGT--GCCGCTTTTGG-TTC-ATAATATTTCCG--GCAAAACAA-----CT-CTATATAATTGT----------AAATTTAACGTAATATCT---------C---------CT--GTGATTACACGG-------CTGGGAGG--AAGGTTACACGT-TTCAACA-ATTAC-TAGAAAGGCTT-ATGCGAAGT-TG-TTCGGCATAATTGTTATTCA-ATTAGAAT-TTA--TTCTT-GGTATTATT-C-G-A--------TAGCT---CTTATTGC---GATCTAATTCTAAAA---T-A-G-ATTCATCT-----TTATATGCGT-TAAGA----C-TTTTCC--AGTG-aaaacaagc
gi|5 : tA----ATT-ATAA---------------TTTATCTCTAGCAT-------------ACATAGGAAAATTGGAGCA-TATATTATTGTGGGAAATGTTATATT-GTATTTGT-ATGATTT-GTGCGGAAAT-AAGGACA-TA-AA---TT-----AAGATTGG-TCAAT-TT-CTGATGA-CCTGTTGA-CGAAGCTAACAGC-CTT-AAAA-AA------GATAG-GAGGT---GGGCAGGGA----TAC-AATTA-CAT---ATT--CAGTGATCTTCATCA-AAC------TTTC-TT-TTGC-GCCTTGCA---T-GTGAC-TA-------AGCTG--TTA--------TA-TC--ACACTTATTACTACCAGG----------TA----TAATTGT-T--CTTCATG-TT-T-TGATATTGATTTCT-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTgacatggttaagaagaagaataaatgttaagtcttcaaattataatttatctctagcatacataggaaaattggagcatatattattgtgggaaatgttatattgtatttgtatgatttgtgcggaaataaggacataaattaagattggtcaatttctgatgacctgttgacgaagctaacagccttaaaaaagataggaggtgggcagggatacaattacatattcagtgatcttcatcaaactttcttttgcgccttgcatgtgactaagctgttatatcacacttattactaccaggtataattgttcttcatgttttgatattgatttctgtagttttacttagttcatttttcagtttgcatttaattt
gi|6 : tgccaattattgtcaacctaacctcaagaaaattgcaacacaaggagattttattcttggcatttacacgttgtcattatgatgaatcaaatgaaatagaaaaaaatgtttaccccaaaatcagcgtagaaagtactattaaattcaaacaattcaaaattaacaagactattttgatttagcgagcgatttacacactgacgcttacatacattataaacgattaaggattcttgaaacaaagtcatgataaaattatactagcaactactgagttgatttctaatggatacagttttctctaaaactattgcagacttgcatttggctactcgaatggtaacttttgaaattttttgacataatcaaatcaacaaaaattaacgtaaattacaaagaatatttagtctcgtacgtactccccatctgttccggttgataaagttaaacttctattgtataaccggaagattagaaataatctatgttgaattctgtaaaatgtattttcccttttcctcatgattactattgtgccgcttttggttcataatatttccggcaaaacaactctatataattgtaaatttaacgtaatatctcctgtgattacacggctgggaggaaggttacacgtttcaacaattactagaaaggcttatgcgaagttgttcggcataattgttattcaattagaatttattcttggtattattcgatagctcttattgcgatctaattctaaaatagattcatctttatatgcgttaagacttttccagtggacatggttaagaagaagaataaatgttaagtcttcaACA--TTCAA-ATG-TAAGTAG---GG--T-ATG-GCAGTCTG-TTCGG-------G-TATTCATTTTAGAATGTTA--TT-TTCGG-ATTATT-CGGGA--------TAGCTTTGC-TA-TATTATAATCTAAT--TAAAAAAATCA-GGATAC-TCT-----TT-CA-GCGTGT-ACA----C-TTTTTCGCAGTG-TAA--------------------C--------------------CA----ATT---GA---------------TTTATCA-TAG-AT-------------ACA-ATGGAAATTA---CA-T-TATT-TTG-GG-AAATTTT----TCCT-TTTGT-ATG--TTGG----GGAAT-AA---CA-TA-CA---TAATTA-ATGATATG-TCA-TGTT-GTG-TG--CCT--TGG-CAAA----ACAAT-GTT---AA-GATA--GGGGTGG-G-GGT----------------TAC-A-TTA-CAT---ATTTCCA-----------CA-TAC------------T-T-GC-A------A---T-GTGAC-TATAATG-TATCTA--TCAA------TTA-TTC-AT-TCTATAACTAT---T----------GA----C--TTGC-TG-CTTCATGTTT-T-CGATATTGATTT-T-G-----TAGT-TTTGTACTTTAGTTC---AT------TTTGA-------TTT-A-TTTCT-GTTTTAA-GA-----AT----AT----CATTA-TTACAT-TA-AAGGGCAG---CAG-----------AT-ATTT-CAG-CGAGGTATTTT--TTCCA-A-ACAT--------CGTATGTACA-TGT--A---TATGC-TCATTGGAAATATTCC-TATAGTAAGTTGCTGTG-TAACTCTG-GCAATTTGTG-CTTGAACAAGGTTCCGGCGGAATTCAA-ATTCAAGAACTT-TAC---------AT--TATGTACTAAT-ACTCACCGTGTTAATA-AAG--GG--TAAAAAGCTCGGGGTAAAA------AAG-AGAACCTGCTT-T-TTGTGCAAGTATTGTAGCT-TTGATTAAAAT-AGAACTGATT-AGTGA-ATGC--AATCGATTATG-AATTATA-CGACTTTGACGC-GTGTGTAGATTTACTA-CAGCCT--AA-AACGT----GAA-TTTG-TTTTGCT-CCGTGCA--ACCG-TTTTTTGTTCAATTCAAACCA-TTAATT---------------G--------------TTCGC-----TA----AAAGT--A-----TTAAGACT-A----CCTAGAAACGTGG-CA-G-ACTGTTCAAGGTCCACATTG-G--ATTGACGC-TAG-AAACATTCAG-ACCG-T--G-CAA-TGACATTCCGCTGATCGGGTCTGGAAATGGGG--------AAAATGGCATTAG---------------------------ATTACTTTTAAATAGACTTtcagtttgcatttaattt
gi|7 : CCAGT-CCAATT--TGTTA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTC-CA-C-GT-T--GT-T--TA--AATG-AAATTAA-T---GAA-A-G-A--GAA-AAAAGGTTT-TACCAAAATT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TG--C--CA----CA-TTTTGATTTTT--AGCCGC-CGATTTAC-A-C-AC-TG-ACGCT-T-TCCA-T-ACAT------T-AT-GAC-GAGTAT-AA-GG--ATC-TTG---A-AC-AAAAAT------CATGA-AACATTTCACTAGAAAC---TAAC--T-GA--TAGA-TTCC-AATG---AT-AG-TTTTTC----ACT-TTG-C--ACTTG-C-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGA-T-T-ATCAACAAAAA-T-GA--CG-TAA----A-TACAAAT-ATATTTAAA-GTCT------CGTACT--CCAT-C--TTCCGGGTTACAATAAAGT-----TG---CTAGTT------------------AA--T--T-CTA---CAAAAT------AATTGT-TGT---C-TTTTCC-CC-TGATT-A-----A---GTTCCGTTT-G-TACAAAAATATTT-CG--GC-AAACAA-----CA-TTATA-AACTATAA--------A---------------TTTACGTAATAC---------TT--GTGATTAC---G-------CTGGAAG--------------------A-A-A-TAT-TA----AG--T-ATG-GAGGTATG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG--------CGC-G--------TA--------TA-C-C---AATCTAAT--CAAAA---TCA-G-ATCC-TCT-----TT----GC---------------TGGCT--GATG-TAA--------------------T---------------------G----GTG-A-GA---------------------G-AAG-AT-------------GTT-AT-----TTA---CA-T-TATT---------------------CT-TTTGT-ATG--TT-G----GGAAT-AA---CATTA-CA---T------ATGATCTG-TCA-T-CT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-TATG--GGGGGGG-G-GGG---GGGGGGG
gi|8 : tCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-CTAGAATTC--AAAAAAATATTT---TAG-AATC--------ATAGACTTTTGCA
gi|9 : -T-ATGACCCTAGAAACGT-GGCA-TTACTGTTCAA--TCCACAT---G--G-TTAC-C-TAG-GAACATTCAG-ACCG-CTCG-CAA-T-ACATTCCGCT-ATCGGGCCGTGAAC--------------GAATGGCCTTAGAATTC-AAAA--AATATTT---TAG-AATTACTTTTGGATAGACTTTTGCAgataatttgaacaaataatgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgattaaaatataaatataaaaatttagctcaaaaccgtgcattcatcgtctattaacagacagaatcaaacactagatgacattttaatgtaagctgtcaaagcatttcgaatgtctcatattacttttttcttctttcacagtgactaaataacaaacgatacttttaaaatcatgtcgttattcaatgtgttagtatttttcaatagaaaatagttatatcttggaacatatttagaggaatgcccatgattcgtaaccaaagcaaaaccacatttataaaatataacatcatttttctaatacttgcacgaattaagatgcaaatatctccgtagccattgcaatggagaggtatgaaaagatg
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): AAAAACCCAAAATTAATATTTAGCTCAAAAACGTGTACCATGTCCTTTAAACAGACCAGAACAAAATCAGATGCATTTTGTAGCTGATCAAAAAGAAATATTGAATGCCTCAACTCTTTTTCTATCTTTCACAGTGCAAATATACAAAACTAACTTTTAAAAATCGTGCTTCGTTATCATGGGTATTGTTTTACATAAGAACTGTTTATCGAACTATTCTTAGAGGAATCCACTGGCATCTAAGCAAAGGCCAATTTATGAAAATAACCATTATTAAAAGAAACAACAGTTTAACTTGCCACAAAAAACACCGCCGTAGCCAATTGGAGACGCTATTTTGAAAAGACG
Unaligned ( gi|15 ): AGAACAAAACCAGATATGCATTTGTTAGCTGTCAAAGCAATTGAATGTCCTCTATTACTTTTTCTATCTTTCACAGTGCAAATATTACAAACGATACCTTTTATAAAATTCATGTTTCGTTATTCAATGTGTATTTGTTTTCAATAAAAAAATTGTTTAATCTGAACCTATTAGAGGAATCCATGGCATTCTAAGCCAAAGCCCACATTATAAAAATTAACCATATTTAACTTGTCAACAGAATTAAGATGCCAAAAACTCCGTAGCCATGCAATGGAGACGTATGAAGAGAT
Unaligned ( gi|16 ): AACAAAAACAGATACATTTTTAGCTGTCAAAGCAATTTGAAATGTCCCTCAACTACTTTTTCTATCTTTCACAGTGCAAATATACAAACGATACTTTTAATAAATCGTGTTTCGTTAATCAATGGGTATTGTTTTCAAAAGAAATGTTTATCGGAACTATTTGGAGGAATCCATGGCATTCTAAGCAAAGCCCACATTTATAAAAATAACCATATTAAAGAAACGACAGTTTTAACTTGCCACAGAAGATGCAAAAATCGCCGTAGCCAATGGAGACGTATGAAAAGATG
Unaligned ( gi|18 ): AGCTGTCAAAGGCAATATTGACCTTCTCTACTACTTTGTTCTATCTTCACAGTGCAAATATACAAAACGATTACTTTTTAATAATCATGATGTTCGTTACAGGTATTGTTTTCATAAAAAAATAGTATCTGAACTAATGAAATCAGAGGAATCCGATGGCCATTCTAAGCAAAACGCCCACATTTTATAACAATTAACCATATTTTAACTTGCCAACCCAGAAATCTTCGAAGCCATGCAATGGAGCACGTTTATGAAA
Unaligned ( gi|21 ): AGACAGAACAAAAGCAGACATGCATTTGGATGCTGTCAAAAGGCAACTTTGAATGTCGCTCTGTAAAACTTTTTCTATCTATTTCACAGTGCCAAAATATTATTAACGATACTTTTTGAAATCTTGTTTCGTGTATTCAATGGGTATTGTTTTCTTTAAAAAAAAA
Unaligned ( gi|26 ): AGATCTTCTGTAACCTTTACACTAGTTCCCCAGTGTTATGGTTAGAGAAGACCTGGCTTTAATTACATGTACCTATGTACATTG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111
lowQualScore : 11111 1111 111111 11 11 11 11 11 111111 11 11 111111 111 2222222 333333 1 222222 11111 333333 6666666666666666666666666666666666 222222222222222 11111 22222222222 111111 44444444444444444444444444444444444444444444444 33333333333333 11 111 111 1 1111111 1 11111111 111 11 0000000000000000000000000000000000000000000000000000000000000000000000 222 22222222222222 1111 44444444444444444 11 1111 333333 1 1 11 1111 1111 1111 44444444444 1111111 11111 11 111111 11 66666666666666666666666 11 1111111 111 111111 2222222 1 11111 3333333333 111 333333333333 1 444444444444 3333333333 111 1 5555555555555 444444444444444444444444 111 1 11111 111 22222222222222222222222222222222 111111111111111111111111111111 11111 44444444 1 111 11 1111 1111 33333333 1 111 1111111
lowQualScore : 5 5 66 5 5 4 4 4 4 11111 66 9999 4 4 4 66 8 4 4 4 4 66 9999 4 4 4 777 4 444444 4 00 4 4 55 66 4 8 22 4 66 00 66 4 88888 9999 4 66 66 4 00 4 4 4 4 4 00 4 1 4 4 222222 4 5 5 11 5 5 66 5 66 5 44 444444 5 888 0 66 5 66 5 5 5 888 5 5 555 5 5 77 5 5 77 5 8888888 999 3 000000 99999 888 99 3 000000 99 77777 6 111111 3 99 6 99 6 1111111111111111111111111111111111 99999 6 111111111111111 1 5 77777 5 5 88888888888 5 5 5 5 77 5 444444 5 1 5 22222222222222222222222222222222222222222222222 77 77777777777777 888 0 33 222 5 111 99 888 66 5 5 0 6666666 5 5 66 5 5 5 0 2 5 88888888 333 4 3 666 77 3 555 999 3 77777 11 3 3 55 6666 3 55 3 8888888888888888888888888888888888888888888888888888888888888888888888 333 5 99999999999999 55 1111 5 5 5 0 44444444444444444 5 11 5 0000 5 888 5 5 888 111111 0 5 5 5 5 11 66 5 0000 5 4 4 7777 9 4 4 3333 3333 555 5 888 66 66666666666 5 9999999 5 5 5 5 55 33333 5 55 11 2 66 999999 5 11 5 0 22222222222222222222222 5 33 3 999 22 5 5555555 5 77 5 000 666666 1 8888888 6 6 6 0 66666 5555555555 6 6 6 6 111 6 222222222222 6 3 6 1 99 99 222222222222 0000000000 6 5 5 5 5 5 22 5 77 000 0 5 5 5 7777777777777 1 5 5 5 77 77 333333333333333333333333 5 5 5 000 1 5 55555 222 5 5 5 5 77 5 3 5 66 5 5 55555555555555555555555555555555 1 5 6 5 5 5 5 5 888888888888888888888888888888 44444 6 11111111 6 5 5 1 0 3 6 888 0 11 0 999 3333 1 8 8 8 8 5555 8 8 8 6 3 1 55555555 3 99 5 111 6 4444444
lowQualScore : . . .. . . . . . . ..... .. .... . . . .. . . . . . .. .... . . . ... . ...... . .. . . .. .. . . .. . .. .. .. . ..... .... . .. .. . .. . . . . . .. . . . . ...... . . . .. . . .. . .. . .. ...... . ... . .. . .. . . . ... . . ... . . .. . . .. . ....... ... . ...... ..... ... .. . ...... .. ..... . ...... . .. . .. . .................................. ..... . ............... . . ..... . . ........... . . . . .. . ...... . . . ............................................... .. .............. ... . .. ... . ... .. ... .. . . . ....... . . .. . . . . . . ........ ... . . ... .. . ... ... . ..... .. . . .. .... . .. . ...................................................................... ... . .............. .. .... . . . . ................. . .. . .... . ... . . ... ...... . . . . . .. .. . .... . . . .... . . . .... .... ... . ... .. ........... . ....... . . . . .. ..... . .. .. . .. ...... . .. . . ....................... . .. . ... .. . ....... . .. . ... ...... . ....... . . . . ..... .......... . . . . ... . ............ . . . . .. .. ............ .......... . . . . . . .. . .. ... . . . . ............. . . . . .. .. ........................ . . . ... . . ..... ... . . . . .. . . . .. . . ................................ . . . . . . . . .............................. ..... . ........ . . . . . . . ... . .. . ... .... . . . . . .... . . . . . . ........ . .. . ... . .......
lowQualScore : 0 0 99 0 0 4 4 4 4 11111 11 4444 4 4 4 11 9 4 4 4 4 11 7777 4 4 4 888 4 111111 4 66 4 4 66 11 4 9 22 4 11 66 11 4 66666 4444 4 11 11 4 66 4 4 4 4 4 66 4 1 4 4 888888 4 0 0 99 0 0 99 0 99 0 44 444444 0 888 1 99 0 99 0 0 0 888 0 0 777 7 7 99 7 7 99 7 4444444 444 2 888888 55555 777 22 3 777777 22 00000 7 777777 7 22 7 22 7 0000000000000000000000000000000000 33333 7 888888888888888 7 7 33333 7 7 33333333333 7 7 7 7 99 7 444444 7 7 7 77777777777777777777777777777777777777777777777 99 11111111111111 000 7 66 000 0 111 55 888 99 0 0 0 2222222 0 0 99 0 0 0 0 5 0 11111111 888 0 6 444 99 5 888 333 1 77777 22 1 1 88 5555 1 00 6 4444444444444444444444444444444444444444444444444444444444444444444444 111 0 88888888888888 44 0000 0 0 0 1 11111111111111111 0 99 0 6666 0 888 0 0 888 999999 0 0 0 0 0 99 99 0 6666 0 4 4 1111 9 4 4 9999 9999 333 0 888 99 99999999999 0 5555555 0 0 0 0 11 99999 0 11 11 0 99 444444 0 99 0 4 33333333333333333333333 7 66 0 444 66 7 7777777 7 99 7 000 444444 0 3333333 7 7 7 5 77777 0000000000 7 7 7 7 777 7 777777777777 7 3 7 7 22 88 555555555555 7777777777 7 7 7 7 7 7 99 7 99 000 1 7 7 7 9999999999999 4 7 7 7 99 99 666666666666666666666666 7 7 7 000 4 7 99999 999 7 7 7 7 99 7 1 0 99 0 0 55555555555555555555555555555555 7 7 6 7 7 7 0 7 555555555555555555555555555555 22222 7 55555555 7 7 7 7 7 3 7 333 8 00 8 444 0000 0 0 0 0 0 4444 0 0 0 7 2 5 88888888 3 88 7 777 7 2222222
consensus : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----ATTACAAAG-ATATTT--A-GTCTCG-A--CGTACT--CCAT-C--TTCC-GGTTACAATAAAGTT--ACTA---CTAGTG------------------AA--T--T-CTA---T-AAAT------AAATGT-TTT---C-TTTTCC-CC-TGATT-A-----AT--GCTCCTTTT-G-TAC-AAAATATTT-CG--GC-AAACAA-----CT-TTATA-AATTGT----------A---------------TT---------C---------TT--GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCA-G-ATCC-TCT-----TT-NA-GCGT-T-ACA----C-TTTTCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCG-TAG-AT-------------ACA-ATGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTAC---G----------TA----T--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G--------------TTCGCCC-TTCAGTGCAAAAT--A----TTTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
Reference ( family-546 ) : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----ATTACAAAG-ATATTT--A-GTCTCG-A--CGTACT--CCAT-C--TTCC-GGTTACAATAAAGTT--ACTA---CTAGTG------------------AA--T--T-CTA---T-AAAT------AAATGT-TTT---C-TTTTCC-CC-TGATT-A-----AT--GCTCCTTTT-G-TAC-AAAATATTT-CG--GC-AAACAA-----CT-TTATA-AATTGT----------A---------------TT---------C---------TT--GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCA-G-ATCC-TCT-----TT-NA-GCGT-T-ACA----C-TTTTCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCG-TAG-AT-------------ACA-ATGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTAC---G----------TA----T--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G--------------TTCGCCC-TTCAGTGCAAAAT--A----TTTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
gi|1 : -C-AATT--TGTCA-ACC-AACCTCAAAGAACAATTGGCAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-CCGTGT--AT-T--TAT-AATG-AAAATTA-T---GAA-ACT-A--AAACAAATG--GCGTACCAAAATT-AGC-CGC---T-AGAA-TTACC-TACTAA-TT--AAC--AATTCAAACGAT-TA--AGCCA----CT-TCTTGA--TTT--AG-CG--CGATT-AC-A-CCAC-TGGACGC--T-TCCAAT-ACATGCCCCAT-AT-GAC-GAG--TCAA-GA--TTCCTTG--AA-ACAAAAAGT------CGTG--AAAATTTTACTAGCACA---TAAC--TGGA--T-GG--TCC-AATG---AT-AA-TTTCTCT---ACT-TTA-C--ACTTACC-TTTG--TA-TCGTATACAATATGG-T-ACATTGAAAATTTTAG---ATGATT-TCATCAACAAAAA-T-GACCCGCTAAATTTATTACAAAG-ATA--C--A-GTCT------CATACT--CCAT-C--TTCC-GGTTACAATAAA-TT--ACTA---GTA-TA------------------AA--T--T-TTA---T-AAA-------AAATGT-TTT---CTTTTTCC-CC-TGAT---------T--GCTCCTTCT-G-TAC-AAAATATTT-CGGCGC-AAACAAGCAATCTATTTTA-AATTGT----------A--------------------------C---------TTAAGTAAT------G-------CTGGAAGATCGGGGTC-CACGATTTCAA-A-T-TG--TAG---GG--TCATG-AAGGTCTG-TATTG-------G-TATTCATTTTAGAAT-ATAGTTC-TT-GG-ATTATCGTGG-A--------T-GCTC--C-TA-TAC----ATTTAAT--TAAAA---TCA-GAATCC-TCT-----TTCAA-GCGT-T-ACA----C-TTTTCC--AGTG--AA--------------------C--------------------TACATGGTT-A-GAGAAACAGAATGTTATTTCATAG-TAG-ATTAGCTAGGGTTAAAC--GTGGAAATTG---CA-T-TATT-TTGTGG--AATG--------CT-TTTGTGATG--TT-T----GGAAT-AA---CA-TACCATACT------ATGATCTGATCA-T-TTCTTG-TG--CCT--TGACCGAA----ACAATGGTT-AAAAGGATAACGAGATGGCT-GAC---GGGGGGGGAC---TAC---TTA-CAT---ATT--CA-----------TA-ATC------TTTC-TTCT-GCGGC-TGGCACTGT-GCGAA-TAC--TG-GATCTATTTTAAAATATGTCA-TT--AT-TTTATTACTAC---GCGCTTATAATTA----T--TTGTCT--CTTCATGCTTATATGTTATTGATTT-TCGTAAGCTAGTATT--TAC-TTAGTTTCTAAT------TTTCA-------GTT-ATTTTCTGGTCTTTACAA-----ATGA--ATA---TATTATTT-CATATATA---GCAGTTACA------------AC-ATCTGCAGACAAGATACTTTTATTTC--ACACATAA------CAT-TGTATG-TAT--ATGCTCAAC-TCATTGAAAA-A-TCC-TATAGT-AGTGGGT-TG-TGA-TACGCGCA----GTG---TGA--AAAGTC---GC-AAACT-----TTCAA-AACTTATACAA-AA----AT--TA------TAC-ACTCACCATGTT-ATACAAGCAGG--T---------------AAAC-----AAGAAGAACCTAATT-TCTT---CAAGTATTGTA-CTAT---TGAAAATAA-AACTGATT-A-TGAGAT-C--AA-CG--TGTGAA--TATACCGACTTTGACGCGGTGC-TAGA--TA------------AA-A--GT----G-A-TTCG-TTT-GCTCCCGTGCAGGACCG---TTTCGTTCAA-GC-TATCA-TTCATTA--------------GTTTAAACCAAACCATTCGCCCTTTCAGTGCAAAAT--ACT--TTTAA-G-T-ACGG-CCTATAAACGT-G-CA-G--CTGTTC----TCC-CATCG-GAAA-TAAC-C-TAGAAAACAGTCAG-ACCGCC--GCCAATT-ACATTCCGCT-ATCAG---TGGAAATGGCGGGCACTCAGGGATGGC-TTAGAATTC-AAACAAATTATTTTTATAGAAATTA
gi|10 : tcGGGGGA----TAC-A-TTA-CAT---ATT--CATATTCA-----CA-AAA------CTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG--ATCTA--TTAA------TTAATT--AT-TTCAG-ATTAA---A----------TA----T--TTGT-TGTTTTCATGCTT-T-T-ATATTGATTT-TTG-----TAAT-TT--TAC-TTAGTTT---ATCTTCAGTTTGA-------TTT-A-TTTCT-GTTTTAATGACTATTATTGTTATG---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------ATTACTG-CAG-CAAGATATTTT--TTCCA--CACAT-A------TAT--GTACA-T-----T--TATAC-TCATTGGAAATATTTC-TATAGT-AGTGGCTGTG-TAA-TCCG-ACAATTCGTG-CTTGA--AAGGTC---GCCAAATTCAA-AGTCAG-AACTT-TAC-ATTAC---ATTGTATGTACCTAT-AC-CACCGTGTT-ATA-AAG--GG--TA--------------AAA------AAG-AGAACCTAATTGT-TT---C-AGT----TA-CT-TG--CT---------ACTGTTTAA-TGA-AT-CTAAA-CGCTTATG-A--TATACCGACTTTGACGA-GTGC-TAGATCTACTA-tcatactttctgcacgataattgaacaaaataat
gi|10 : AGTGCTAGATCTA----CTAAAGG-TTATGACCCTAGAAACGTGG-CATT-ACTGTTaaggttatgaccctagaaacgtggcattactgtt
gi|11 : gggggatacattacatattcatattcacaaaacttctttgcgcttgcatgtgactacatgatctattaattaattatttcagattaaatatttgttgttttcatgcttttatattgatttttgtaattttacttagtttatcttcagtttgatttatttctgttttaatgactattattgttatgtattattcattaagcagtacagattactgcagcaagatattttttccacacatatatgtacatttatactcattggaaatatttctatagtagtggctgtgtaatccgacaattcgtgcttgaaaggtcgccaaattcaaagtcagaactttacattacattgtatgtacctataccaccgtgttataaagggtaaaaaagagaacctaattgtttcagttacttgctactgtttaatgaatctaaacgcttatgatataccgactttgacgGT-C-AATT--TATCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AG------T-TA-T-CT--GCCATTTAGCACC-GT-T--GTCC--TATAAATG-ACATTAA-T---GAA-A---A--TAA-AAATG--TT-TACCAAAAAT-ATCAAGCG--T-AGAAAGTACT-T--TAA-TT--AACA-AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT---T-CG--CG-CTTAC-ATC-ACTTG-ACGC--T-TCCA-TAACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-AC--AAAGT------CATGA-AAAATTTCACTAGCAAC---TAACGTT-GA--T-GA-TTCC-AATG----T-AG-TTACTCT---ACT-TTGCC--ACTTG-C-TTTG--TG-TCG-------TATGG---ACATT
gi|13 : ATTCC-AATAGT-AGTGGCTGTG-TAA-TCCA-GCAATTCGTG-CTTGA--AATGTC---GTGAAATTCAA-TTTCAA-AACTT-TAC-A-----------TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATG-T-TT---C-AGTATTGTA-C--G---TTAAAAT-A-AACAGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCAACTTTGACGA-GTGC-TAGATTTACTT-CA-CCT--AA-A--ATGTCGG-A-TTCG-TATCGCT-CCGTGCA-GACTG-TTTTTCGTTCAGTGCAAACCA-TTCATTGTTTAAACCAGACC-G--------------TTTGCCC-TTCAGTGCAAAAT--A-----TTAAGG-T-ACGGCCCAAGatcataaaatcattaaacaatcataataagtttaattaacaattaagaaaactaaattcatgaaaattgtttaa
gi|14 : CCAGTTC-TAAT--TGTCATACC-A-CCTCAA-GAA-AATTG-CAATCACTTTTTAGTAGG----TTGTA-T-CT--C-CATTTA-CA-C-GT-TTCGT----TAT-AATG-AAATTAAAT---GAA-A-TGA--AAA-AAATG--TT--ACCAAAAATTATC-AGCGCGT-AGAAAGTACT-T--TAA-TT--AACAAAATTCAAA--ATGTACTC--CA----CA-TTTTGA--TTTTAAG-CG--CGATTTACAA-C-AC-TG-GCGC--T-T-CA-T-ATGT------T-AT-GACTAAGT-T-AA-GA--TTC-TTG--AA-GA-AATAGTACATGACATGA-AACATTTCACTAGCAACTAATAAC--T-GC--T-GA-TTCC-AATG---AC-AG-TTT
gi|17 : t------AAATAT-TTC---A-TTTTCC-CC-GGATT-A-----ATC-GCTCCATTT-T-TAC-AAAATATTT-CG--GC-AAACTG-----CT-TTAGA-AATTGT----------AGAT------------TTACGTAATA-C---------TT--GTGATTA----GTAATACACTGGAAGA--AGGGT--CACG--TTCAA-A-A-TAC-TAA---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GA-ATTATT-CGG-ATATCCATCTAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCA-G-ATTC-TCT-----TT-CA-GCGT-T-ACA----T-TTTTCC--AGTG-TAA--------------------T--------------------
gi|19 : CCAGT-C-AATT--TGTCA-CAA-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-A--TAT-AATG-AAATTAA-T---GAA-A-T-AATAAA-AAATGT-TT-TACCAAAAAT-ATC-AGCG--T-AG-AAGTACT-T--TAA-TT--AAC--AATTCAAA--A--TA--A--CA----CATTTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-T---CGCAATATACA-T-ACAG------T-Aggttataga
gi|2 : tCCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-C---G-CATTTA-CA-C-GT-T--GT-A--TAT-AATGGAAATTAA-TTTTGAATA-A-A--AAA-AAATG--TT-TACCAAAAAT-AT--AGCG--TTAGAAAGTACT-TCTTAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GATTTTC-TTG--AA-AC--AAAGT------CGTGA-AAAATTTTACTA-CAAC---TAAC--T-GA--T-GG-TTCCAAATG---ATAAA-TTTCTCT---ACT-TTG-C--ACTTA-C-TTT---TA-TCGT------TATGGTT-ACATTTGAA--TT------ATGA-T-T-ATCAA-AAAAA-T-GA--CG-TAA----A-TACAAAG-ATA-----A-GGCTCA-GCTCATACT--CCAT-C--TTCC-GGTTACAATAAAGTT--ACT-------GTG------------------AATTT--T-CTA---T--AAT------AAATTG-TTT---C-TTTTCC-CC-TGATT-A-----AT--TCTCCTTTT-GATAA-AATATATTT-CA--GC-AAACAA-----CT-TT-TT-TATTGTCCTTTACGTAA---------------TA---------C---------AT--GTGATTATT--G-------CTGGAAGA--AGGGT--CACG---TCAA-A-A-T---TTG---GG--T-ATG-GAAGTCTGTTTCGG-------G-TATTCATTTTAGAAT-ATA--TT-TT-GG-ATTATTCCGG-A--------TAGCT---C-TA-TAC---AATCTAAT--T-AAA---TCAGG-ATCC-TCT-----TT-AA-GCGT-T-ACA----CTTTTTCC--AGTG-TAATGGTTAGAGAAGATGTTATTT--------------------CT----ATTAA-GA---------------TTTAGC--TAG-GT-------------ACA-ATGGAAATTG---CATT-TATT-TTGTGG-AAA--TT----T-CTATTTGT-ATT--TT-G----GGAAT-A-----A-TA-CA---T------ATGATCTGTTCATT-TT-TTG-TG--CCT--TGA-CGAA----ACAAT-GTT-AAAA-GAAG--GGGG-GG-G-GGG---GGGGGGGGGAGATTAC-A-TTA-CAT---ATT--CA-----------TA-AAC------TTTCTTT-T-GC-GC-TTGCA---TCGTGAC-TAC-ATG-GATCTA--TTAA------TTA--T--AT-TTTATTACTACAT-G----------TAATATT--TTGT-T--CTTCATGATT-T-TGTTATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTCAGTTTGATTTT-A-TTTCT-GTTTTAATGA-----AT----ATAAGGTATTA-TT-TAA-T--A---CCAG-TACGGGGGAAAAAACAAT-TTTTGCAG-CAAGATATTTT--TTTCC-ACACAT-ATTGCTGCAT-TGTATACTGTACATG-TATACTTCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-G-----CGTGTTTTGA--AAGGTC---GC------CAA-ATT-AA-AACTA-TAC-A-------------------TAT-ACTCACCGTGTT-ATA-AAG--GGTTT---------------AAAAATTTTAAG-AGAA-CTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT---AACTGATT-A-TGA--------------TAT-------TACCGCTTTTGATGC-GTGC-TAGG---A---------T--AA-A--GT----G-ATTTCGTTTTCGCT-CCTTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTGTTTAAACCAAACCAT--------------TTCGCCC-TTCAGTGCAAAAC--ATTTTTTTAA-G-T-ACGGCCCTAGAAACGT-G-CAGG-ACTGTTCAA--TCCACATCGTG--A-TAAC-CGTAG-AAACATTCAGAACCG-C--G-CAA-T-ACATT-CGCT-ATCGGGTC-GGAAATGGAGCTA-----GGAAAGGT-GTAGAATTCAAAAAAAAATATTT---TAG-AATTA-------AAAAACTTTTGCAaa
gi|20 : -ATTC-TCT-----TT-AA-GTGT-T--CA----C-TTTTCC--AGTG-TAA--------------------TGGTTTTATAGAAGACG----TA----ATT-T-CA---------------TTTATCTCTAG-AT-------------ACA-ATGGAAATT----CA-T-TATT-TTGTGG--AATGTT--------------------TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CG-A----ACAAC-GTT-AAAG-AGGG--GGGGGGG-G-GGTGGGGGGGGGGGG----TAC-A-Tgataa
gi|22 : gaGATTATG-A--GATACC----CTGAAGC-GTGC-TA------TTA-TA-CCTTCAA-A--TC----G-G-TACG-TTT-GAT-TCATGGA-AATTG-TTCATTGTTCAGTGCAAACCGTTTCATaat
gi|23 : -AAAA-G--G--GGGG-GG-G-GG----GGGGGGGGG----CAC-A-GTA-AATTAAATT---A-----------CC-AGCCTAGGGTTTC-TT-T--T-GC--TACA-----GTGAC-C-C-AGGATA---A--TTAAC-----TTA-TGGAAT-CTCGTTACTacaaaaatcatttcctaaatctgcagatcgtttaag
gi|24 : acA-CAC---AATCTAGT--TTAAA---TCA-G-ATCC-TCT-----CT-TG-CCAT-T-ATACTACC-TTCTCC--AGTG-TAA--------------------T--------------------tccactgaggtaattcttgttc
gi|24 : -TA-TAC---AATCTAAT--TTTAA---TCA-G-ATCT-TCT-----CT-TA-CCAT-T-ACA----C-Tggtaagagaagatctgattaaaattagattgtatacttacaa
gi|25 : acacaatctagtttaaatcagatcctctcttgccattatactaccttctcc-TG-TAA---AATTTAAT--TAAAG---TGAAG-ATTT-TCTCAACCTT-AA-CGGT-T-GCA----C-TTCTCC--AGTG-CAA--------------------cttacaa
gi|25 : TAAT--TAAAA---TCA-G-CTTC-TCT-----T---A-CCGT-T-GCA----C-Tcggtaagagaagctgattttaatta
gi|3 : tgtaaaatttaattaaagtgaagattttctcaaccttaacggttgcacttctccCCAGT-C-AATT--TGTCA-ATC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTCGA--TTT--AG-CA--TGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCCCTAGCAAC---TAAC--T-GA--T-AA-TTCC-AGTG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-A-TTTG--TA-TCG-------TATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----A-TGCAAAG-ATATTT--A-GTCTCGTA--CGTACT--CCAT-C--TTCC-GGTTACAATAAAGTT--ACTAGGCCTAGTG------------------AA--T--T-CTA---T-GAAT------AAATGT-TTT---C-TTTTCC-CT-TGATT-A-----ATA-GTTCCTTTT-G-AAC-ATAATATTT-CG--GC-AAACAA-----CT-TTATA-AATTGT----------A--------------------------C---------TT--GTGAC------G-------CTGGAAGA--AGGGT--CACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTATAAT-TTA---T-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAT---GA--TAGTC-TAA-------------CC-TCT-----TT-CA-GCGT-T-ACA----T-TTTCCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCA--AG-AT-------------TCA-ATGGAAATTA---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATGA-TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CAAA----ACAAC-GTT-AAAC-GATG--GGGGTGG-G-GGT---GGGGTGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-AC-TTGCA---T-GTGAC-TAC-ATG-TATTTA--TTAA------TTA-TC--AT-TCTATTACTAT--------------TA----C--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTAA-------TTT-A-TTTCT-GTTTTAATGA-----AT----AT----CATTA-TT-CAT-TA-A---GCAG-TACAA-----------AT-ATTT-CAG-CAAGATATTTT--TCCAA-ACACAT-AAT----CA--TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTTGCTGTG-TAA-TCTG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTA-TAC-A-TAC---ATG-TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AGG-AGAACCTAATT-T-TT---C-AGTATTGTT-CT-T---TTAAAAT-A-AACTGATT-A-TGT-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AATAC-GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTAATT---------------G--------------TTCG------CA----AAAAT--A-----TTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ATTGTTCAA--TCCACATTG-G--A-TTAC-C-TAG-AAACATTCAG-AC---T--G-CAA-T-ACATTCCGCT-ATTGGGTCTGAAAATGGAG--------GAAATTGC-TTAGAATTC-AAAAGAAATATTA---TAG-AATTACTTTTAGATAGACTTTTGCA
gi|4 : CCTCA--GAA-AATTG-CAA-CAC-----A--AGT----TT-TACT-CT--GGCATTTA-CA-C-GT-T--GTTC--TAT-AATG-AATTAAA-T---GAA-A-T-A--A----------------------T-AT--AGTG--T-AGAAAGTCCCCT--TAA-TT--AAC--AATTCAAA--AT-TG--A--CA-----A-TTTTGA--TTT--AT-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------TTAT-GAC-GTG--T-AA-GA--TTC-TTGCGAATAC-AAAAGT------CATGA-AAAATTTCACTAGCAA------AC--T-GA--T-GA-TTCC-AATG---AC-AG-TTTCTCTG--ACT-TTT-G--ACTTG-C-TTTG--TA-T-GT------AA-GG-T-ACATT--AAATGT------ATGATT-T-ATCAACAAAAA-AAGA--CGCTAA----AT-ACAAA--ATATTG--AAGTCTCG-A--C-TACT--CCATTC--TTCC-GGTTAGAA-AAAGT----CTA---T--GTG------------------AA--T--TACTA---T-AA-T------AA-TGT-TTT---TATTTTCCGCC-TGATTTA-----ATTGGCTTCTTTT-G-TAC-AAAATATTT-CG--GC-AAACG------CT-TTATC-AACTGT----------AA--------------TT---------TACGTTATAATT--GTGATTA----G-------CTGGAAGA--GGG----CACG--TTCAA-A-AATAC-TAG---GG--T-ATG-GAAGTCTGTTTCGG-------G-TATTCATTTTCGAAT-TTA--TT-TT-GG-ATTATT-C-G-A--------TAGCT---C-TA-TAC---AATCTAAT--T-AAA---TCA-ATATCG-TCT-----TT-AA-GCGT-T--CA----T-TTTTCC--A-TGTTAA--------------------TGGTTAGATAAGATGTTATTGCA----ATT-A-GA---------------TTTGTC--TAG-AT--------------CA-ATGGACATTG---CC-T-TGTT-TAGTGG-GA--------------------ATG--TT-G----GGAATAAA---AA-TA-CA---TAAACAAATGGTCTG-TCATT-TT-TTG-TGGCCTT--TAA-CGAA----ACAAG-ATTAAAAA-GATG------------------CGGGGGAAA----TACAA-TTAGCAT---ATT--CATTC--------CACAAC-------TTC-GT-T-GT-GC-TTGCT---G-GTGACGTAC-ATG-TACATA--TTAA------TTA-TT--CT-TTTATTACTACAT-G----------TATT--T--TTGT-T--CTTCATGCTT--------TTGATTT-T-G-----TAG--TT--TAT-TTAGTTC---AT------TTTTAG------TTTGA-TTTC-----------A-----AT----AT----TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATA-TTT--TTCCACACACAT-A----------TGT-CA--GT----------T-TCAATGGAAATATTCTATATATT-AGTGGCTGTGTTGA-TCC--GC-ATTCGTG-CTTGA--AAGGT----GCAAAATTCAAGATTCAA-AA-TT-TAC-A-TATGTTAC--TATGTACCTATAACTCACCGTCTT-ATA-A----GG--T----------------AA------AAG-AG-ATCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-A--TGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGATTTGGACGC-GTG--TAGATC-ACTACCA-CCT---------T----G---T----TTTCGCT-CCGTGCA-GACCGATTTTTCGTTC-ATGC-AACCA-TTCATTG--------------G--------------TTCt
gi|5 : GC-C-AATTATTGTCA-ACCTAACCTCAA-GAA-AATTG-CAA-CAC-----A--AGGAGATTT-TA-TTCTTGG-CATTTA-CA-C-GT-T--GT-CATTAT-GATG-AATCAAA-T---GAA-A-T-AGAAAA-AAATG--TT-TACCCCAAA--ATC-AGCG--T-AGAAAGTACTAT--TAAATTCAAAC--AATTCAAA--AT-TA--A--CAAGACTA-TTTTGA--TTT--AG-CGAGCGATTTAC-A-C-AC-TG-ACGC--T-TACA-T-ACAT------T-ATAAAC-GAT--T-AAGGA--TTC-TTG--AA-AC--AAAGT------CATGATAAAATTATACTAGCAAC---T-AC--T-GAGTT-GATTTCT-AATGGATAC-AGTTTTCTCTAAAACTATTG-CAGACTTG-CATTTGGCTACTCG-------AATGG-TAACTTTTGAAATTTTTTGACATAATCAA-ATCAACAAAAATT-AA--CG-TAA----ATTACAAAGAATATTT--A-GTCTCGTA--CGTACTCCCCAT-CTGTTCC-GGTT--GATAAAGTTAAACTT---CTATTGTATAACCGGAAGATTAGAAA--TAAT-CTATGTT-GAATTCTGTAAAATGTATTTTCCC-TTTTCC-TCATGATT-ACTATTGT--GCCGCTTTTGG-TTC-ATAATATTTCCG--GCAAAACAA-----CT-CTATATAATTGT----------AAATTTAACGTAATATCT---------C---------CT--GTGATTACACGG-------CTGGGAGG--AAGGTTACACGT-TTCAACA-ATTAC-TAGAAAGGCTT-ATGCGAAGT-TG-TTCGGCATAATTGTTATTCA-ATTAGAAT-TTA--TTCTT-GGTATTATT-C-G-A--------TAGCT---CTTATTGC---GATCTAATTCTAAAA---T-A-G-ATTCATCT-----TTATATGCGT-TAAGA----C-TTTTCC--AGTG-aaaacaagc
gi|5 : tA----ATT-ATAA---------------TTTATCTCTAGCAT-------------ACATAGGAAAATTGGAGCA-TATATTATTGTGGGAAATGTTATATT-GTATTTGT-ATGATTT-GTGCGGAAAT-AAGGACA-TA-AA---TT-----AAGATTGG-TCAAT-TT-CTGATGA-CCTGTTGA-CGAAGCTAACAGC-CTT-AAAA-AA------GATAG-GAGGT---GGGCAGGGA----TAC-AATTA-CAT---ATT--CAGTGATCTTCATCA-AAC------TTTC-TT-TTGC-GCCTTGCA---T-GTGAC-TA-------AGCTG--TTA--------TA-TC--ACACTTATTACTACCAGG----------TA----TAATTGT-T--CTTCATG-TT-T-TGATATTGATTTCT-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTgacatggttaagaagaagaataaatgttaagtcttcaaattataatttatctctagcatacataggaaaattggagcatatattattgtgggaaatgttatattgtatttgtatgatttgtgcggaaataaggacataaattaagattggtcaatttctgatgacctgttgacgaagctaacagccttaaaaaagataggaggtgggcagggatacaattacatattcagtgatcttcatcaaactttcttttgcgccttgcatgtgactaagctgttatatcacacttattactaccaggtataattgttcttcatgttttgatattgatttctgtagttttacttagttcatttttcagtttgcatttaattt
gi|6 : tgccaattattgtcaacctaacctcaagaaaattgcaacacaaggagattttattcttggcatttacacgttgtcattatgatgaatcaaatgaaatagaaaaaaatgtttaccccaaaatcagcgtagaaagtactattaaattcaaacaattcaaaattaacaagactattttgatttagcgagcgatttacacactgacgcttacatacattataaacgattaaggattcttgaaacaaagtcatgataaaattatactagcaactactgagttgatttctaatggatacagttttctctaaaactattgcagacttgcatttggctactcgaatggtaacttttgaaattttttgacataatcaaatcaacaaaaattaacgtaaattacaaagaatatttagtctcgtacgtactccccatctgttccggttgataaagttaaacttctattgtataaccggaagattagaaataatctatgttgaattctgtaaaatgtattttcccttttcctcatgattactattgtgccgcttttggttcataatatttccggcaaaacaactctatataattgtaaatttaacgtaatatctcctgtgattacacggctgggaggaaggttacacgtttcaacaattactagaaaggcttatgcgaagttgttcggcataattgttattcaattagaatttattcttggtattattcgatagctcttattgcgatctaattctaaaatagattcatctttatatgcgttaagacttttccagtggacatggttaagaagaagaataaatgttaagtcttcaACA--TTCAA-ATG-TAAGTAG---GG--T-ATG-GCAGTCTG-TTCGG-------G-TATTCATTTTAGAATGTTA--TT-TTCGG-ATTATT-CGGGA--------TAGCTTTGC-TA-TATTATAATCTAAT--TAAAAAAATCA-GGATAC-TCT-----TT-CA-GCGTGT-ACA----C-TTTTTCGCAGTG-TAA--------------------C--------------------CA----ATT---GA---------------TTTATCA-TAG-AT-------------ACA-ATGGAAATTA---CA-T-TATT-TTG-GG-AAATTTT----TCCT-TTTGT-ATG--TTGG----GGAAT-AA---CA-TA-CA---TAATTA-ATGATATG-TCA-TGTT-GTG-TG--CCT--TGG-CAAA----ACAAT-GTT---AA-GATA--GGGGTGG-G-GGT----------------TAC-A-TTA-CAT---ATTTCCA-----------CA-TAC------------T-T-GC-A------A---T-GTGAC-TATAATG-TATCTA--TCAA------TTA-TTC-AT-TCTATAACTAT---T----------GA----C--TTGC-TG-CTTCATGTTT-T-CGATATTGATTT-T-G-----TAGT-TTTGTACTTTAGTTC---AT------TTTGA-------TTT-A-TTTCT-GTTTTAA-GA-----AT----AT----CATTA-TTACAT-TA-AAGGGCAG---CAG-----------AT-ATTT-CAG-CGAGGTATTTT--TTCCA-A-ACAT--------CGTATGTACA-TGT--A---TATGC-TCATTGGAAATATTCC-TATAGTAAGTTGCTGTG-TAACTCTG-GCAATTTGTG-CTTGAACAAGGTTCCGGCGGAATTCAA-ATTCAAGAACTT-TAC---------AT--TATGTACTAAT-ACTCACCGTGTTAATA-AAG--GG--TAAAAAGCTCGGGGTAAAA------AAG-AGAACCTGCTT-T-TTGTGCAAGTATTGTAGCT-TTGATTAAAAT-AGAACTGATT-AGTGA-ATGC--AATCGATTATG-AATTATA-CGACTTTGACGC-GTGTGTAGATTTACTA-CAGCCT--AA-AACGT----GAA-TTTG-TTTTGCT-CCGTGCA--ACCG-TTTTTTGTTCAATTCAAACCA-TTAATT---------------G--------------TTCGC-----TA----AAAGT--A-----TTAAGACT-A----CCTAGAAACGTGG-CA-G-ACTGTTCAAGGTCCACATTG-G--ATTGACGC-TAG-AAACATTCAG-ACCG-T--G-CAA-TGACATTCCGCTGATCGGGTCTGGAAATGGGG--------AAAATGGCATTAG---------------------------ATTACTTTTAAATAGACTTtcagtttgcatttaattt
gi|7 : CCAGT-CCAATT--TGTTA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTC-CA-C-GT-T--GT-T--TA--AATG-AAATTAA-T---GAA-A-G-A--GAA-AAAAGGTTT-TACCAAAATT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TG--C--CA----CA-TTTTGATTTTT--AGCCGC-CGATTTAC-A-C-AC-TG-ACGCT-T-TCCA-T-ACAT------T-AT-GAC-GAGTAT-AA-GG--ATC-TTG---A-AC-AAAAAT------CATGA-AACATTTCACTAGAAAC---TAAC--T-GA--TAGA-TTCC-AATG---AT-AG-TTTTTC----ACT-TTG-C--ACTTG-C-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGA-T-T-ATCAACAAAAA-T-GA--CG-TAA----A-TACAAAT-ATATTTAAA-GTCT------CGTACT--CCAT-C--TTCCGGGTTACAATAAAGT-----TG---CTAGTT------------------AA--T--T-CTA---CAAAAT------AATTGT-TGT---C-TTTTCC-CC-TGATT-A-----A---GTTCCGTTT-G-TACAAAAATATTT-CG--GC-AAACAA-----CA-TTATA-AACTATAA--------A---------------TTTACGTAATAC---------TT--GTGATTAC---G-------CTGGAAG--------------------A-A-A-TAT-TA----AG--T-ATG-GAGGTATG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG--------CGC-G--------TA--------TA-C-C---AATCTAAT--CAAAA---TCA-G-ATCC-TCT-----TT----GC---------------TGGCT--GATG-TAA--------------------T---------------------G----GTG-A-GA---------------------G-AAG-AT-------------GTT-AT-----TTA---CA-T-TATT---------------------CT-TTTGT-ATG--TT-G----GGAAT-AA---CATTA-CA---T------ATGATCTG-TCA-T-CT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-TATG--GGGGGGG-G-GGG---GGGGGGG
gi|8 : tCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-CTAGAATTC--AAAAAAATATTT---TAG-AATC--------ATAGACTTTTGCA
gi|9 : -T-ATGACCCTAGAAACGT-GGCA-TTACTGTTCAA--TCCACAT---G--G-TTAC-C-TAG-GAACATTCAG-ACCG-CTCG-CAA-T-ACATTCCGCT-ATCGGGCCGTGAAC--------------GAATGGCCTTAGAATTC-AAAA--AATATTT---TAG-AATTACTTTTGGATAGACTTTTGCAgataatttgaacaaataatgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgattaaaatataaatataaaaatttagctcaaaaccgtgcattcatcgtctattaacagacagaatcaaacactagatgacattttaatgtaagctgtcaaagcatttcgaatgtctcatattacttttttcttctttcacagtgactaaataacaaacgatacttttaaaatcatgtcgttattcaatgtgttagtatttttcaatagaaaatagttatatcttggaacatatttagaggaatgcccatgattcgtaaccaaagcaaaaccacatttataaaatataacatcatttttctaatacttgcacgaattaagatgcaaatatctccgtagccattgcaatggagaggtatgaaaagatg
blockSeqs : T C AT T T . . . T TTTTT GT AGAT G C T TG C G C . . TC CAT A G A TTT T TAAT . GT . T CA CG T C CT A CA AA . G CTC AGAC T TT TA C AG A T . T . AA A C . A . T A T TA . G TT . CG T A ACATGA T TAA GT . GT A T A GAT A T AAA A C AG . A GC C T TT T TTTGAC TCAA AA . C AT GA TTTAA A CAGCT A CC T TG G TAAACTTCTATTGTATAACCGGAAGATTAGA TTT A TGTTGAATTCTGTA A A TCCC G A ACTATTGT G A A C . A G . A T AAATTTAACGTAATATCTC . TAGTAATACA A TA TT C AA AG AAA CT . C T CATAATT T G . C C T C G G TATCCATC TTG T T TAT TC A AAA GG A CAACC AT T G AA CTAC T GC T TGGTTAGAGAAGATGTTATTTCTATTAAGA TCT C A AT GGAG T A A GAAATGTTATATTGTA . AT G TGCG A GGA T . . AAACAA T T G . A GC GT . GCTA . A . AG G . A TGGG AGAT AA G TAA TC GTGATCTTCAT C CTAGGGT T . T . CT TC G AA AT T . C A GA A ATGTAATATT . GT C T GT C TG . TG T . CTTCAG G GTTTGAT G . . T CTATT TGTTATG . A . . AGG . GGGGAAAAAACA T G . T . AC ATTGCTGCAT CTGTACATG T A A T C . AA T AC CCG C G G . ATTACATTG T A A . . TT AAAAAGCTCGGGGTAAAA . G . GTG A G TTGA AG A G . G TA T C . AT . G TTTACTTCACCTAAAATGTCGGA T T C . . A A T GTTTAAACCAAACCAT CCTT G ATTTTT G C T T G G TT GG CGT AT A G G . A CTC . . G G T A CTA A AA A . . CTTTTAG
blockSeqs : . . . . . . . . . . . . . . . . G . . . . . CC . . . . . TAGA . T . . C . . A . . . A . . A . . . . . C . . . . . T . A . . . . . . T . . . . . . A . . . . . . . . . . . . G . . . . . . . T TA T . TTT TT . . AT G TTT . CGTA G . . . . TACTAGGCCTAGTG TAA . CAAAAT A . TA . . TAATTG . . . . . . A . A . AGATTTACGTAATAC . TACACGG A . T . AT C . . . . T . . . . . . . . G . . . . . . C T . AG . . C . . A . . . . TGGTTAGATAAGATGTTATTGCAATTAGA TCT . A A G . . . AAATTTTTCCT . A . . . . . . . AATTA . T . . . A . . . . . . GG T . . G . AA . . . TATTCA . C . . . . T T . A G T . . . C . CAGGTATAA . G A T GA . G . . . . . C G . . . T . ATAAGG . . . . . . G . . . T . A AATCA TGTATG . . . . . . AA . . . G . . . ATATGTTAC T . . . . . AAAAATTTT . . . . . . TG A . . . . . . A . . . . TTTACTACAGCCTAAAACGTGAA T . C . . . A . GTTTAAACCAGACCG CCTT G CTAC G . . C G . GG . TG A T . . . . C . . . . T A . C A G . . CTTTTAA
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . TC . . . . . TGA . . . . C . . . . . . . . . A . . . . . . . . . . . . . C . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . T T T . TTT T . . A G TTG . CGTA G . . . . TGCTAGTT T . TGAAT A . A . . AATC . . . . . . A . A . AAATTTACGTAATAC . TATTG A . T . TG C . . . . . . . . . . . . . G . . . . . . . T . AT . . A . . A . . . . TGGTTTTATAGAAGACGTAATTTCA AT . T A A . . . AAATGTTTCT . . . . . . . . . T . A . . . . . . . . . . TG T . . T . A . . . TTC . T . . . . T T . A T T . . . . . ATGTATTT . . C T GA . G . . . . . A . . . . T . AT . . . . . . A . . . T . C ATAT TGTA . . . . . . AA . . . G . . . ATACATG T . . . . . AAAA . . . . . . G A . . . . . . A . . . . TCTACTACACCTAATACGTGA A . C . . . A . GG . G A G . . C . . TT . TG A G . . . . T . . . . T G . . A A . . CTTTTGG
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . A . . . . . AA . . . . C . . . . . . . . . A . . . . . . . . . . . . . C . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . T T . TT T . . A T TTT . CGA G . . . . TACTGTG T . TAAT A . C . . AATA . . . . . . A . A . CCTTTACGTAATAC . TACG A . T . A C . . . . . . . . . . . . . G . . . . . . . A . GG . . A . . A . . . . TCAATTAGA GA . A A G . . . AAATTTCTA . . . . . . . . . . . . . . . . . . . . . . TG T . . T . A . . . . . T . . . . T G . A T C . . . . . ATAT . . C T GA . G . . . . . T . . . . . . AT . . . . . . G . . . T . A CGTA TT . . . . . . AA . . . A . . . AT T . . . . . AAA . . . . . . T A . . . . . . A . . . . TTATACCTTCAAATCGG T . C . . . A . G . . A G . . C . . G . . G T . . . . T . . . . G A . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . A . . . . . TA . . . . C . . . . . . . . . A . . . . . . . . . . . . . C . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . TT T . . A . . . . . . . . . CTATGTG T . TAAT T . C . . AAT . . . . . . A . A . AATTTACGTTATAA . TAG G . T . A C . . . . . . . . . . . . . G . . . . . . . A . G . . T . . A . . . . CCAATTGA T . A A A . . . AATGTT . . . . . . . . . . . . . . . . . . . . . . TA G . . T . A . . . . . T . . . . T T . A T G . . . . . TGAC . . T T A . G . . . . . G . . . . . . AT . . . . . . G . . . . . A A GT . . . . . . A . . . G . . . A T . . . . . AAA . . . . . . T . . . . . . . A . . . . TCACTACCACCTTG T . T . . . A . G . A . . . T . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . C . . . . . TA . . . . C . . . . . . . . . A . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . C . . AA . . . . . . . . . . AC . G . . . . A T . . . . . . . . . . . . . . . . . . . . . A . G . . T . . G . . . . TGGTGAGA A . G A A . . . GA . . . . . . . . . . . . . . . . . . . . . . TG . . . G . A . . . . . . . . . . . T . A . T . . . . . TAC . . . . . . G . . . . . . . . . . . . . . . . . . A . . . . . . AA . . . . . . T . . . . . . . A . . . . ATAAAGTGAT . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . T . . . . . GA . . . . . . . . . . . . . . A . . . . . . . . . . . . . C . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . A . G . . A . . G . . . . T . . T . . . . CT . . . . . . . . . . . . . . . . . . . . . . G . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . C . . . . . . . . . . . . . . . . . . . . . . A . G . . C . . A . . . . . . . . . . . . A
blockSeqs : . . . . A . G . . A . . A . . . .
blockSeqs : . . . . . G . . C . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqs : . . . . . . . .
blockSeqCons : TA**** ** ** A**** ****** A* T****** ****** TTT** ** A***** TTT** CGCA** TACTAGTG************************** C**** AATA******* ** A***** AAATTTACGTAATAC******************************** ** TACG********** A** ** T** C* ** *** G** N* T** A************* A* AAATTTTCT******** *** TG** **** A** T**** A* ** ****** ATATATC**************** T** G****** *** AT******** G*********** ** A* ATAT******** TGTAT***** AA ATATT******** ** AAAA******************** T**** A** TTTACTACACCTAAAAGTGA************ GG**************************** ***** A******* TT* A*** T*** ******** A* *** CTTTTAG
originalCons : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-AC-AAAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GA--CG-TAA----ATTACAAAG-ATATTT--A-GTCTCG-A--CGTACT--CCAT-C--TTCC-GGTTACAATAAAGTT--ACTA---CTAGTG------------------AA--T--T-CTA---T-AAAT------AAATGT-TTT---C-TTTTCC-CC-TGATT-A-----AT--GCTCCTTTT-G-TAC-AAAATATTT-CG--GC-AAACAA-----CT-TTATA-AATTGT----------A---------------TT---------C---------TT--GTGATTA----G-------CTGGAAGA--AGGGT--CACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCA-G-ATCC-TCT-----TT-NA-GCGT-T-ACA----C-TTTTCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCG-TAG-AT-------------ACA-ATGGAAATTG---CA-T-TATT-TTGTGG-AAATGTT----T-CT-TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TAC-A-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTAC---G----------TA----T--TTGT-T--CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----AT----ATA---TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACAT-A------CAT-TGTACA-TGT--ATG-TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-A-TA----AT--TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--T---------------AAA------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATCTACTA-CA-CCT--AA-A--GT----G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G--------------TTCGCCC-TTCAGTGCAAAAT--A----TTTAAGG-T-ACGGCCCTAGAAACGT-G-CA-G-ACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
finalCons : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-ATA----AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TAA----CA----CA-TTTTGA--TTT--AG-CG--CGATTTAC-A-C-AC-TG-ACGC--T-TCCA-T-ACAT------T-AT-GAC-GAG--T-AA-GA--TTC-TTG--AA-ACA-AAAGT------CATGA-AAAATTTCACTAGCAAC---TAAC--T-GA--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTG-C-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGATTT--ATCAACAAAAA-T-GA--CG-TAAA-----TACAAAG-ATATTT--A-GTCTCGCA--CGTACT--CCAT-C--TTCC-GGTTACAATAAAGTTACTAGTG--------------------------AA--T--T-CTA---T-AAAT------AAATGT-TTTC----TTTTCC-CC-TGATTAATA-------GCTCCTTTT-G-TAC-AAAATATTT-CG--GC-AAACAA-----CT-TTATA-AATTGTAAATTTACGTAATAC--------------------------------TT--GTGATTACG----------CTGGAAGA--AGGGT--CACGT--TCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TTCGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCAG--ATCC-TCT-----TTN-A-GCGT-T-ACA----C-TTTTCC--AGTG-TAA--------------------T--------------------CA----ATT-A-GA---------------TTTATCT--AG-ATA-------------CA-ATGGAAATTG---CA-T-TATT-TTGTGGAAATTTTCT--------TTTGT-ATG--TT-G----GGAAT-AA---CA-TA-CA---T------ATGATCTG-TCA-T-TT-TTG-TG--CCT--TGA-CGAA----ACAAC-GTT-AAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TACA--TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCAT----GTGAC-TACA-TG-TATCTA--TTAA------TTA-TT--AT-TTTATTACTACATATATC----------------TTGT-T--CTTCATGCTTT--TGATATTGATTT-TG------TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTTAACGA-----ATAT--------TATTA-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCA-ACACATATAT--------TGTACATGTAT-----TATAC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TACATATT--------TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--TAAAA--------------------AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CTT----TTAAAATA--AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TAGATTTACTACACCTAAAAGTGA------------TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTGG----------------------------TTCGC-----CAGTGCAAAATA-------TTAAGG-T-ACGGCCCTAGAAACGT-G-CATT-ACTGTTCAA--TCCACATCG-GA---TNAC-C-TAG-AAACATTCAG-ACCGT---G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTCA-AAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): AAAAACCCAAAATTAATATTTAGCTCAAAAACGTGTACCATGTCCTTTAAACAGACCAGAACAAAATCAGATGCATTTTGTAGCTGATCAAAAAGAAATATTGAATGCCTCAACTCTTTTTCTATCTTTCACAGTGCAAATATACAAAACTAACTTTTAAAAATCGTGCTTCGTTATCATGGGTATTGTTTTACATAAGAACTGTTTATCGAACTATTCTTAGAGGAATCCACTGGCATCTAAGCAAAGGCCAATTTATGAAAATAACCATTATTAAAAGAAACAACAGTTTAACTTGCCACAAAAAACACCGCCGTAGCCAATTGGAGACGCTATTTTGAAAAGACG
Unaligned ( gi|15 ): AGAACAAAACCAGATATGCATTTGTTAGCTGTCAAAGCAATTGAATGTCCTCTATTACTTTTTCTATCTTTCACAGTGCAAATATTACAAACGATACCTTTTATAAAATTCATGTTTCGTTATTCAATGTGTATTTGTTTTCAATAAAAAAATTGTTTAATCTGAACCTATTAGAGGAATCCATGGCATTCTAAGCCAAAGCCCACATTATAAAAATTAACCATATTTAACTTGTCAACAGAATTAAGATGCCAAAAACTCCGTAGCCATGCAATGGAGACGTATGAAGAGAT
Unaligned ( gi|16 ): AACAAAAACAGATACATTTTTAGCTGTCAAAGCAATTTGAAATGTCCCTCAACTACTTTTTCTATCTTTCACAGTGCAAATATACAAACGATACTTTTAATAAATCGTGTTTCGTTAATCAATGGGTATTGTTTTCAAAAGAAATGTTTATCGGAACTATTTGGAGGAATCCATGGCATTCTAAGCAAAGCCCACATTTATAAAAATAACCATATTAAAGAAACGACAGTTTTAACTTGCCACAGAAGATGCAAAAATCGCCGTAGCCAATGGAGACGTATGAAAAGATG
Unaligned ( gi|18 ): AGCTGTCAAAGGCAATATTGACCTTCTCTACTACTTTGTTCTATCTTCACAGTGCAAATATACAAAACGATTACTTTTTAATAATCATGATGTTCGTTACAGGTATTGTTTTCATAAAAAAATAGTATCTGAACTAATGAAATCAGAGGAATCCGATGGCCATTCTAAGCAAAACGCCCACATTTTATAACAATTAACCATATTTTAACTTGCCAACCCAGAAATCTTCGAAGCCATGCAATGGAGCACGTTTATGAAA
Unaligned ( gi|21 ): AGACAGAACAAAAGCAGACATGCATTTGGATGCTGTCAAAAGGCAACTTTGAATGTCGCTCTGTAAAACTTTTTCTATCTATTTCACAGTGCCAAAATATTATTAACGATACTTTTTGAAATCTTGTTTCGTGTATTCAATGGGTATTGTTTTCTTTAAAAAAAAA
Unaligned ( gi|26 ): AGATCTTCTGTAACCTTTACACTAGTTCCCCAGTGTTATGGTTAGAGAAGACCTGGCTTTAATTACATGTACCTATGTACATTG
Alignments
lowQualScore : 1111111111111111111111111111111111111111
lowQualScore : 11111 1111 111111 11 11 11 11 111111 111111 111 1 22222222 333333 111 1 11111 11 3333 11111 6666666666666666666666666666 222222222222222 11111 3333333333 11 111111 11 1111 3333333333 111 111 1111111 1 11111111 111 11 999999999999999999999999999999999999999999 111 222222 1111 1111 11 22222222 1111 777777777777777777777777777777777777 11 1111 1 222222222222 1 1 11 1111 1111111 1 1111 1111 44444444444 111111 11111 11 111111 11 55555555555555555555 1111111 111 111111 2222222 1111111 1111 2222222222 111 333333333333 1 3333333333333 33333333333333 111 1 666666666666 44444444444444 11111 111 1 11111 111 11111111111 1 111 3333333333333333333333333333333333333333 22222222 1111 1 22 11 1111 1111 33333333 1 111 1111111
lowQualScore : 5 5 66 5 5 4 4 4 4 11111 66 9999 4 4 4 66 8 4 4 4 4 66 9999 4 4 4 777 4 444444 4 00 4 4 55 66 4 8 22 4 66 00 66 4 88888 9999 4 22 4 66 4 4 4 4 4 4 66 4 55 4 4 222222 4 5 5 5 5 66 5 66 5 66 5 9 5 444444 5 888 0 66 5 66 5 5 5 888 5 5 555 5 5 77 1 77 5 66666666 999 3 000000 666 888 99 3 6 66666 99 777 55 6 1111 99 6 99 6 66666 6666666666666666666666666666 99999 6 111111111111111 1 5 11111 5 5 5 1111111111 5 5 5 5 33 444444 5 1 5 88 5 1111 0 1 5555555555 888 0 77 5 222 5 111 99 888 66 5 5 5 5 6666666 5 5 66 5 5 5 0 5 88888888 333 4 3 666 77 555 999 3 77777 11 3 3 55 6666 3 55 3 666666666666666666666666666666666666666666 000 66 111111 5 2 5 0000 4444 5 11 66 33333333 0000 0 5 0 000000000000000000000000000000000000 11 5 0000 888 0 5 888 222222222222 0 0 5 5 5 5 11 66 5 0000 5 0000000 2 4 4 3333 3333 8 5 888 66 66666666666 5 444444 0 5 5 5 5 55 33333 5 55 11 2 66 999999 5 11 5 0 888 88888888888888888888 5 5 5 3 5 5 5 5555555 5 77 5 000 666666 1 8888888 6 6 6 7777777 4444 9999999999 6 6 6 6 111 6 222222222222 6 3 6 99 99 5555555555555 11111111111111 6 5 5 5 5 5 22 5 77 000 0 5 5 5 5 111111111111 1 5 5 5 77 11111111111111 5 44444 5 5 5 000 1 5 55555 222 5 5 5 5 77 5 3 5 66 5 5 5 88888888888 4 5 1 77 111 1 5 6 5 5 5 5 5 7777777777777777777777777777777777777777 6 88888888 5555 1 0 3 6 66 0 11 0 999 3333 1 8 8 8 8 9999 8 8 8 6 3 1 55555555 3 99 5 111 6 4444444
lowQualScore : . . .. . . . . . . ..... .. .... . . . .. . . . . . .. .... . . . ... . ...... . .. . . .. .. . . .. . .. .. .. . ..... .... . .. . .. . . . . . . .. . .. . . ...... . . . . . .. . .. . .. . . . ...... . ... . .. . .. . . . ... . . ... . . .. . .. . ........ ... . ...... ... ... .. . . ..... .. ... .. . .... .. . .. . ..... ............................ ..... . ............... . . ..... . . . .......... . . . . .. ...... . . . .. . .... . . .......... ... . .. . ... . ... .. ... .. . . . . ....... . . .. . . . . . ........ ... . . ... .. ... ... . ..... .. . . .. .... . .. . .......................................... ... .. ...... . . . .... .... . .. .. ........ .... . . . .................................... .. . .... ... . . ... ............ . . . . . . .. .. . .... . ....... . . . .... .... . . ... .. ........... . ...... . . . . . .. ..... . .. .. . .. ...... . .. . . ... .................... . . . . . . . ....... . .. . ... ...... . ....... . . . ....... .... .......... . . . . ... . ............ . . . .. .. ............. .............. . . . . . . .. . .. ... . . . . . ............ . . . . .. .............. . ..... . . . ... . . ..... ... . . . . .. . . . .. . . . ........... . . . .. ... . . . . . . . . ........................................ . ........ .... . . . . .. . .. . ... .... . . . . . .... . . . . . . ........ . .. . ... . .......
lowQualScore : 0 0 99 0 0 4 4 4 4 11111 11 4444 4 4 4 11 9 4 4 4 4 11 7777 4 4 4 888 4 111111 4 66 4 4 66 11 4 9 22 4 11 66 11 4 66666 4444 4 22 4 11 4 4 4 4 4 4 11 4 66 4 4 888888 4 0 0 0 0 99 0 99 0 99 0 4 0 444444 0 888 1 99 0 99 0 0 0 888 0 0 777 7 7 99 4 99 7 99999999 444 2 888888 888 777 22 3 7 77777 22 888 88 7 3333 22 7 22 7 77777 2222222222222222222222222222 33333 7 888888888888888 7 7 66666 7 7 7 3333333333 7 7 7 7 66 444444 7 7 7 99 7 4444 3 4 1111111111 000 7 99 0 000 0 111 55 888 99 0 0 0 0 2222222 0 0 99 0 0 0 0 0 11111111 888 0 6 444 99 888 333 1 77777 22 1 1 88 5555 1 00 6 444444444444444444444444444444444444444444 444 99 555555 0 2 0 6666 1111 0 99 99 11111111 6666 1 0 1 666666666666666666666666666666666666 99 0 6666 888 0 0 888 999999999999 0 0 0 0 0 0 99 99 0 6666 0 4444444 7 4 4 9999 9999 9 0 888 99 99999999999 0 444444 1 0 0 0 0 11 99999 0 11 11 0 99 444444 0 99 0 4 888 55555555555555555555 0 0 0 0 7 7 7 7777777 7 99 7 000 444444 0 3333333 7 7 7 3333333 2222 2222222222 7 7 7 7 777 7 777777777777 7 3 7 22 77 2222222222222 22222222222222 7 7 7 7 7 7 99 7 99 000 1 7 7 7 7 111111111111 4 7 7 7 99 44444444444444 0 33333 7 7 7 000 4 7 99999 999 7 7 7 7 99 7 1 0 99 0 0 0 55555555555 9 7 4 99 666 7 7 6 7 7 7 0 7 2222222222222222222222222222222222222222 7 55555555 6666 7 7 3 7 55 8 00 8 444 0000 0 0 0 0 0 0000 0 0 0 7 2 5 88888888 3 88 7 777 7 2222222
consensus : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------T-AT-GAC-GAG-T-A--A-GA--TTC-TTG--AA-ACAAAA-GT------CATGA-AAAATTTCACTAGCAAC---TAAC--TG-A--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTGC-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GAC--G-TAAA-T-----ACAAAG-ATATTTA--GTCTC-GTACGTACT--CCAT-C--TTCCGG-TTACAATAAAGTTA-----CTA-G------TG------------------AA--T--T-CTA---T-AAAT------AAATGT-TTT---C-TTTT-CC-CC-TGATT-AAT-A----GCTCCTTTT-G-TAC-AAAATATTT-CGGC--AAACAA-----CT-TTATA-AATTGTAAATTT-ACGTAATA---CTTGTGATTA------C---GCTGGAAGA--AGGGT--C-ACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCA-G-ATCC-TCT-----TT-NA-GCGT-T-ACA----C-TTTTCC--A-GTGTAA--------------------T--------------------CAATT-A-GAT--TTATC-T--AG-ATACA-ATGGAA----ATTG---CA-T--T--ATT--------TT----GTGG-AAAT-T---TT---T------TTTGT--------------ATG--TT-G----GGAATAA---CA-TA-CA---T-----A------TGATCTG-TCA-T-TT-TT-G-TG--CCT--TGA-CGAA----ACAAC-GTTAAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TACA-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACT---AC------AT---A--TA--TCTT-GT-T-CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTT----AATGAATAT----TATT----------A-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCAACACAT-AT------AT--TGTACA-TGTAT---TAT--AC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-AT---AT----T-TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--------------TAAAA-----AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TA-GATTTACTA-CA-CCTAA-AA-GT--G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G--------------TTCGCCCTT-CAGTGCAAAAT--A-----TTAAGG--TACGGCCCTAGAAACGT-G-CA-GACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-C--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
Reference ( family-546 ) : CCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------T-AT-GAC-GAG-T-A--A-GA--TTC-TTG--AA-ACAAAA-GT------CATGA-AAAATTTCACTAGCAAC---TAAC--TG-A--T-GA-TTCC-AATG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTGC-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GAC--G-TAAA-T-----ACAAAG-ATATTTA--GTCTC-GCACGTACT--CCAT-C--TTCCGG-TTACAATAAAGTTA-----CTA-G------TG------------------AA--T--T-CTA---T-AAAT------AAATGT-TTT---C-TTTT-CC-CC-TGATT-AAT-A----GCTCCTTTT-G-TAC-AAAATATTT-CGGC--AAACAA-----CT-TTATA-AATTGTAAATTT-ACGTAATA---CTTGTGATTA------C---GCTGGAAGA--AGGGT--C-ACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG-ATTATT-CGG-A--------TAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCA-G-ATCC-TCT-----TT-NA-GCGT-T-ACA----C-TTTTCC--A-GTGTAA--------------------T--------------------CAATT-A-GAT--TTATC-T--AG-ATACA-ATGGAA----ATTG---CA-T--T--ATT--------TT----GTGG-AAAT-T---TT--CT------TTTGT--------------ATG--TT-G----GGAATAA---CA-TA-CA---T-----A------TGATCTG-TCA-T-TT-TT-G-TG--CCT--TGA-CGAA----ACAAC-GTTAAAA-GATG--GGGGTGG-G-GGT---GGGGGGGGG----TACA-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG-TATCTA--TTAA------TTA-TT--AT-TTTATTACT---AC------AT---A--TA--TCTT-GT-T-CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTNA-------TTT-A-TTTCT-GTTTT----AACGAATAT----TATT----------A-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TTCCAACACAT-AT------AT--TGTACA-TGTAT---TAT--AC-TCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTT-TAC-AT---AT----T-TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--------------TAAAA-----AAG-AGAACCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-AACTGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TA-GATTTACTA-CA-CCTAA-AA-GT--G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTG--------------G--------------TTCGC-----CAGTGCAAAAT--A-----TTAAGG--TACGGCCCTAGAAACGT-G-CATTACTGTTCAA--TCCACATCG-G--A-TNAC-C-TAG-AAACATTCAG-ACCG-T--G-CAA-T-ACATTCCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-TTAGAATTC-AAAAAAAATATTT---TAG-AATTACTTTTAGATAGACTTTTGCA
gi|1 : -C-AATT--TGTCA-ACC-AACCTCAAAGAACAATTGGCAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-CCGTGT--AT-T--TAT-AATG-AAAATTA-T---GAA-ACT-A--AAACAAATG--GCGTACCAAAATT-AGC-CGC---T-AGAA-TTACC-TACTAA-TT--AAC--AATTCAAACGAT-TA--AGCCA----CT-TCTTGATTT--AGC-G--C-GATT-AC-A-CCAC-TGGACGC--T-T-CCAAT-ACATGCCCCAT-AT-GAC-GAG-TCA--A-GA--TTCCTTG--AA-ACAAAAAGT------CGTGA-AAA-TTTTACTAGCACA---TAAC--TGGA--T-GG-T-CC-AATG---AT-AA-TTTCTCT---ACT-TTA-C--ACTTACCTTTG--TA-TCGTATACAATATGG-T-ACATTGAAAATTTTAG---ATGATT-TCATCAACAAAAA-T-GACCCGCTAAA-TTTATTACAAAG-ATAC--A--GTCTC-A----TACT--CCAT-C--TTCCGG-TTACAATAAA-TTA-----CTA-G------TATA----------------AA--T--T-TTA---T-AAA-------AAATGT-TTT---C-TTTTTCC-CC-TGATT----------GCTCCTTCT-G-TAC-AAAATATTT-CGGCGCAAACAAGCAATCTATTTTA-AATTGTA--CTT-AAGTAAT------------------------GCTGGAAGATCGGGGT--CCACGATTTCAA-A-T-TG--TAG---GG--TCATG-AAGGTCTG-TA-TTG-------G-TATTCATTTTAGAAT-ATAGTTC-TT-GG-ATTATCGTGG-A--------T-GCTC--C-TA-TAC----ATTTAAT--TAAAA---TCA-GAATCC-TCT-----TTCAA-GCGT-T-ACA----C-TTTTCC--A-GTG---------------------------------------------AACT-A-CATGGTTA---G--AG-AAACA----GAATGTTATTT---CA-TAGTAGATTAGCTAGGGTTAAACGTGG-AAAT-TGCATT--AT------TTTGTGGAATGCTTTTGTGATG--TT-T----GGAATAA---CA-TACCATACT-----A------TGATCTGATCA-T-TTCTT-G-TG--CCT--TGACCGAA----ACAATGGTTAAAAGGATAACGAGATGGCT-GAC---GGGGGGGGAC---TAC--TTA-CAT---ATT--CA-----------TA-ATC------TTTC-TTCT-GCGGC-TGGCACTGT-GCGAA-TAC--TG-GATCTATTTTAAAATATGTCA-TT--AT-TTTATTACT---ACGCGCTTAT---AATTA--T-TT-GTCT-CTTCATGCTTATATGTTATTGATTT-TCGTAAGCTAGTATT--TAC-TTAGTTTCTAAT------TTTCA-------GTT-ATTTTCTGGTCTTTACAAATGAATA-----TATT----------ATTT-CATATATA---GCAGTTACA------------AC-ATCTGCAGACAAGATACTTTTATTTC-ACACATAAC------AT--TGTATG-TATAT---GCTCAAC-TCATTGAAAA-A-TCC-TATAGT-AGTGGGT-TG-TGA-TACGCGCA----GTG---TGA--AAAGTC---GC-AAACT-----TTCAA-AACTTATACAAA---AA----T-TA------TAC-ACTCACCATGTT-ATACAAGCAGG--------------TAAAC-----AAGAAGAACCTAATT-TCTT---CAAGTATTGTA-CTAT---TGAAAATAA-AACTGATT-A-TGAGAT-C--AA-CG--TGTGAA--TATACCGACTTTGACGCGGTGC-TA-GA-------------TAA-AA-GT--G-A-TTCG-TTT-GCTCCCGTGCAGGACCG---TTTCGTTCAA-GC-TATCA-TTCATTA--------------GTTTAAACCAAACCATTCGCCCTTTCAGTGCAAAAT--ACTT--TTAA-G--TACGG-CCTATAAACGT-G-CA--GCTGTTC----TCC-CATCG-GAAA-TAAC-C-TAGAAAACAGTCAG-ACCGCC--GCCAATT-ACATTCCGCT-ATCAG---TGGAAATGGCGGGCACTCAGGGATGGC-TTAGAATTC-AAACAAATTATTTTTATAGAAATTA
gi|10 : tcGGGGGA----TACA-TTA-CAT---ATT--CATATTCA-----CA-AAA------CTTC-TT-T-GC-GC-TTGCA---T-GTGAC-TAC-ATG--ATCTA--TTAA------TTAATT--AT-TTCAG-ATT---AA------AT---A--TT--TGTT-GT-T--TTCATGCTT-T-T-ATATTGATTT-TTG-----TAAT-TT--TAC-TTAGTTT---ATCTTCAGTTTGA-------TTT-A-TTTCT-GTTTT----AATGACTAT----TATTGTTATGTATTA-TT-CAT-TA-A---GCAG-TACAG-----------ATTACTG-CAG-CAAGATATTTT--TTCCA-CACAT-AT------AT---GTACA-T---T---TAT--AC-TCATTGGAAATATTTC-TATAGT-AGTGGCTGTG-TAA-TCCG-ACAATTCGTG-CTTGA--AAGGTC---GCCAAATTCAA-AGTCAG-AACTT-TAC-ATTACAT----TGTATGTACCTAT-AC-CACCGTGTT-ATA-AAG--GG--------------TAAAA-----AAG-AGAACCTAATTGT-TT---C-AGT----TA-CT-TG--CT---------ACTGTTTAA-TGA-AT-CTAAA-CGCTTATG-A--TATACCGACTTTGACGA-GTGC-TA-GATCTACTA-tcatactttctgcacgataattgaacaaaataat
gi|10 : AGTGCTAGATCTA-----CTAAAGGTTATGACCCTAGAAACGTGG-CATTACTGTTaaggttatgaccctagaaacgtggcattactgtt
gi|11 : gggggatacattacatattcatattcacaaaacttctttgcgcttgcatgtgactacatgatctattaattaattatttcagattaaatatttgttgttttcatgcttttatattgatttttgtaattttacttagtttatcttcagtttgatttatttctgttttaatgactattattgttatgtattattcattaagcagtacagattactgcagcaagatattttttccacacatatatgtacatttatactcattggaaatatttctatagtagtggctgtgtaatccgacaattcgtgcttgaaaggtcgccaaattcaaagtcagaactttacattacattgtatgtacctataccaccgtgttataaagggtaaaaaagagaacctaattgtttcagttacttgctactgtttaatgaatctaaacgcttatgatataccgactttgacgGT-C-AATT--TATCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AG------T-TA-T-CT--GCCATTTAGCACC-GT-T--GTCC--TATAAATG-ACATTAA-T---GAA-A---A--TAA-AAATG--TT-TACCAAAAAT-ATCAAGCG--T-AGAAAGTACT-T--TAA-TT--AACA-AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT---TC-G--C-G-CTTAC-ATC-ACTTG-ACGC--T-T-CCA-TAACAT------T-AT-GAC-GAG-T-A--A-GA--TTC-TTG--AA-AC-AAA-GT------CATGA-AAAATTTCACTAGCAAC---TAACGTTG-A--T-GA-TTCC-AATG----T-AG-TTACTCT---ACT-TTGCC--ACTTGC-TTTG--TG-TCG-------TATGG---ACATT
gi|13 : ATTCC-AATAGT-AGTGGCTGTG-TAA-TCCA-GCAATTCGTG-CTTGA--AATGTC---GTGAAATTCAA-TTTCAA-AACTT-TAC-A------------TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--------------T-AAA-----AAG-AGAACCTAATG-T-TT---C-AGTATTGTA-C--G---TTAAAAT-A-AACAGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCAACTTTGACGA-GTGC-TA-GATTTACTT-CA-CCTAA-AATGTCGG-A-TTCG-TATCGCT-CCGTGCA-GACTG-TTTTTCGTTCAGTGCAAACCA-TTCATTGTTTAAACCAGACC-G--------------TTTGCCCTT-CAGTGCAAAAT--A-----TTAAGG--TACGGCCCAAGatcataaaatcattaaacaatcataataagtttaattaacaattaagaaaactaaattcatgaaaattgtttaa
gi|14 : CCAGTTC-TAAT--TGTCATACC-A-CCTCAA-GAA-AATTG-CAATCACTTTTTAGTAGG----TTGTA-T-CT--C-CATTTA-CA-C-GT-TTCGT----TAT-AATG-AAATTAAAT---GAA-A-TGA--AAA-AAATG--TT--ACCAAAAATTATC-AGCGCGT-AGAAAGTACT-T--TAA-TT--AACAAAATTCAAA--ATGTACTC--CA----CA-TTTTGATTTTAAGC-G--C-GATTTACAA-C-AC-TG-GCGC--T-T--CA-T-ATGT------T-AT-GACTAAGTT-A--A-GA--TTC-TTG--AA-GAAATA-GTACATGACATGA-AACATTTCACTAGCAACTAATAAC--TG-C--T-GA-TTCC-AATG---AC-AG-TTT
gi|17 : t------AAATAT-TTC---A-TTTT-CC-CC-GGATT-AAT-C----GCTCCATTT-T-TAC-AAAATATTT-CGGC--AAACTG-----CT-TTAGA-AATTGTAGATTT-ACGTAATA---CTTGTGATTAGTAATAC---ACTGGAAGA--AGGGT--C-ACG--TTCAA-A-A-TAC-TAA---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GA-ATTATT-CGG-ATATCCATCTAGCT---C-TA-TAC---AATCTAAT--TAAAA---TCA-G-ATTC-TCT-----TT-CA-GCGT-T-ACA----T-TTTTCC--A-GTGTAA--------------------T--------------------
gi|19 : CCAGT-C-AATT--TGTCA-CAA-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-A--TAT-AATG-AAATTAA-T---GAA-A-T-AATAAA-AAATGT-TT-TACCAAAAAT-ATC-AGCG--T-AG-AAGTACT-T--TAA-TT--AAC--AATTCAAA--A--TA--A--CA----CATTTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-T---CGCAATAT-ACA-T-ACAG------T-Aggttataga
gi|2 : tCCAGT-C-AATT--TGTCA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-C---G-CATTTA-CA-C-GT-T--GT-A--TAT-AATGGAAATTAA-TTTTGAATA-A-A--AAA-AAATG--TT-TACCAAAAAT-AT--AGCG--TTAGAAAGTACT-TCTTAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTTGATTT--AGC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------T-AT-GAC-GAG-T-A--A-GATTTTC-TTG--AA-AC-AAA-GT------CGTGA-AAAATTTTACTA-CAAC---TAAC--TG-A--T-GG-TTCCAAATG---ATAAA-TTTCTCT---ACT-TTG-C--ACTTAC-TTT---TA-TCGT------TATGGTT-ACATTTGAA--TT------ATGA-T-T-ATCAA-AAAAA-T-GAC--G-TAAA-T-----ACAAAG-ATA---A--GGCTCAGCTCATACT--CCAT-C--TTCCGG-TTACAATAAAGTTA-----CT--G------TG------------------AATTT--T-CTA---T--AAT------AAATTG-TTT---C-TTTT-CC-CC-TGATT-AAT------TCTCCTTTT-GATAA-AATATATTT-CAGC--AAACAA-----CT-TT-TT-TATTGT-CCTTT-ACGTAATA---CATGTGATTAT-----T---GCTGGAAGA--AGGGT--C-ACG---TCAA-A-A-T---TTG---GG--T-ATG-GAAGTCTGTTT-CGG-------G-TATTCATTTTAGAAT-ATA--TT-TT-GG-ATTATTCCGG-A--------TAGCT---C-TA-TAC---AATCTAAT--T-AAA---TCAGG-ATCC-TCT-----TT-AA-GCGT-T-ACA----CTTTTTCC--A-GTGTAATGGTTAGAGAAGATGTTATTT--------------------CTATTAA-GAT--TTAGC-T--AG-GTACA-ATGGAA----ATTG---CATT--T--ATT--------TT----GTGG-AAAT-T---TC--TA------TTTGT--------------ATT--TT-G----GGAATA-----A-TA-CA---T-----A------TGATCTGTTCATT-TT-TT-G-TG--CCT--TGA-CGAA----ACAAT-GTTAAAA-GAAG--GGGG-GG-G-GGG---GGGGGGGGGAGATTACA-TTA-CAT---ATT--CA-----------TA-AAC------TTTCTTT-T-GC-GC-TTGCA---TCGTGAC-TAC-ATG-GATCTA--TTAA------TTA--T--AT-TTTATTACT---AC------ATGTAA--TA--TTTT-GT-T-CTTCATGATT-T-TGTTATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTCAGTTTGATTTT-A-TTTCT-GTTTT----AATGAATATAAGGTATT----------A-TT-TAA-T--A---CCAG-TACGGGGGAAAAAACAAT-TTTTGCAG-CAAGATATTTT--TTTCCACACAT-ATTGCTGCAT--TGTATACTGTACATGTAT--ACTTCATTGGAAATATTCC-TATAGT-AGTGGCTGTG-TAA-TCCG-G-----CGTGTTTTGA--AAGGTC---GC------CAA-ATT-AA-AACTA-TAC-A--------------------TAT-ACTCACCGTGTT-ATA-AAG--GGTT------------TAAAAATTTTAAG-AGAA-CTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT---AACTGATT-A-TGA--------------TAT-------TACCGCTTTTGATGC-GTGC-TAGGAT--------------A-AA-GT--G-ATTTCGTTTTCGCT-CCTTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTCATTGTTTAAACCAAACCAT--------------TTCGCCCTT-CAGTGCAAAAC--ATTTTTTTAA-G--TACGGCCCTAGAAACGT-G-CAGGACTGTTCAA--TCCACATCGTG--A-TAAC-CGTAG-AAACATTCAGAACCG-C--G-CAA-T-ACATT-CGCT-ATCGGGTC-GGAAATGGAGCTA-----GGAAAGGT-GTAGAATTCAAAAAAAAATATTT---TAG-AATTA-------AAAAACTTTTGCAaa
gi|20 : -ATTC-TCT-----TT-AA-GTGT-T--CA----C-TTTTCC--A-GTGTAA--------------------TGGTTTTATAGAAGACG----TAATT-T-CAT--TTATC-TCTAG-ATACA-ATGGAA----ATT----CA-T--T--ATT--------TT----GTGG-AA-----------------------T--------------GTT--TT-G----GGAATAA---CA-TA-CA---T-----A------TGATCTG-TCA-T-TT-TT-G-TG--CCT--TGA-CG-A----ACAAC-GTTAAAG-AGGG--GGGGGGG-G-GGTGGGGGGGGGGGG----TACA-Tgataa
gi|22 : gaGATTATG-A--GATACC----CTGAAGC-GTGC-TA----TTA-TA-C--CTTCA-AA-TC--G-G-TACG-TTT-GAT-TCATGGA-AATTG-TTCATTGTTCAGTGCAAACCGTTTCATaat
gi|23 : AAAA-G--G--GGGG-GG-G-GG----GGGGGGGGG----CACA-GTA-AATTAAATT---A-----------CC-AGCCTAGGGTTTC-TT-T--T-GC--TACA-----GTGAC-C-C-AGGATA---A--TTAAC-----TTA-TGGAAT-CTCGTTACTTCCACTG----AG---G--TAATTCTT-GT-T-Cacaaaaatcatttcctaaatctgcagatcgtttaag
gi|24 : acA-CAC---AATCTAGT--TTAAA---TCA-G-ATCC-TCT-----CT-TG-CCAT-T-ATACTACC-TTCTCC--A-GTGTAA--------------------T--------------------
gi|24 : -TA-TAC---AATCTAAT--TTTAA---TCA-G-ATCT-TCT-----CT-TA-CCAT-T-ACA----C-Tggtaagagaagatctgattaaaattagattgtatacttacaa
gi|25 : acacaatctagtttaaatcagatcctctcttgccattatactaccttctcc-TG-TAA---AATTTAAT--TAAAG---TGAAG-ATTT-TCTCAACCTT-AA-CGGT-T-GCA----C-TTCTCC--A-GTGCAA--------------------cttacaa
gi|25 : TAAT--TAAAA---TCA-G-CTTC-TCT-----T---A-CCGT-T-GCA----C-Tcggtaagagaagctgattttaatta
gi|3 : tgtaaaatttaattaaagtgaagattttctcaaccttaacggttgcacttctccCCAGT-C-AATT--TGTCA-ATC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTA-CA-C-GT-T--GT-C--TAT-AATG-AAATTAA-T---GAA-A-T-A--AAA-AAATG--TT-TACCAAAAAT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TA--A--CA----CA-TTTCGATTT--AGC-A--T-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------T-AT-GAC-GAG-T-A--A-GA--TTC-TTG--AA-ACAAAA-GT------CATGA-AAAATTTCCCTAGCAAC---TAAC--TG-A--T-AA-TTCC-AGTG---AT-AG-TTTCTCT---ACT-TTG-C--ACTTGA-TTTG--TA-TCGT-------ATGG-T-ACATTTGAAATTT------ATGATT-T-ATCAACAAAAA-T-GAC--G-TAAA-T-----GCAAAG-ATATTTA--GTCTC-GTACGTACT--CCAT-C--TTCCGG-TTACAATAAAGTTA-----CTA-GGCCTAGTG------------------AA--T--T-CTA---T-GAAT------AAATGT-TTT---C-TTTT-CC-CT-TGATT-AAT-A----GTTCCTTTT-G-AAC-ATAATATTT-CGGC--AAACAA-----CT-TTATA-AATTGTA-----------------CTTGTGA---------C---GCTGGAAGA--AGGGT--C-ACG--TTCAA-A-A-TAC-TAG---GG--T-ATG-GAAGTCTG-TT-CGG-------G-TATTCATTTTATAAT-TTA--TT-T--GG-ATTATT-CGG-A--------TAGCT---C-TA-TAT---GAT--AGTC-TAA-------------CC-TCT-----TT-CA-GCGT-T-ACA----T-TTTCCC--A-GTGTAA--------------------T--------------------CAATT-A-GAT--TTATC-A--AG-ATTCA-ATGGAA----ATTA---CA-T--T--ATT--------TT----GTGG-AAATGT---TT--CT------TTTGT--------------ATGA-TT-G----GGAATAA---CA-TA-CA---T-----A------TGATCTG-TCA-T-TT-TT-G-TG--CCT--TGA-CAAA----ACAAC-GTTAAAC-GATG--GGGGTGG-G-GGT---GGGGTGGGG----TACA-TTA-CAT---ATT--CA-----------CA-AAC------TTTC-TT-T-GC-AC-TTGCA---T-GTGAC-TAC-ATG-TATTTA--TTAA------TTA-TC--AT-TCTATTACT---AT-------T---A-------CTT-GT-T-CTTCATGCTT-T-TGATATTGATTT-T-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTAA-------TTT-A-TTTCT-GTTTT----AATGAATAT----CATT----------A-TT-CAT-TA-A---GCAG-TACAA-----------AT-ATTT-CAG-CAAGATATTTT--TCCAAACACAT-A-------ATCATGTACA-TGTATG--TAT--AC-TCATTGGAAATATTCC-TATAGT-AGTTGCTGTG-TAA-TCTG-GCAATTCGTG-CTTGA--AAGGTC---GCGAAATTCAA-ATTCAA-AACTA-TAC-ATAC-AT----G-TATGTACCTAT-ACTCACCGTGTT-ATA-AAG--GG--------------T-AAA-----AGG-AGAACCTAATT-T-TT---C-AGTATTGTT-CT-T---TTAAAAT-A-AACTGATT-A-TGT-AT-C--AA-CGATTATG-A--TATACCGACTTTGACGC-GTGC-TA-GATCTACTA-CA-CCTAATAC-GT--G-A-TTCG-TTTCGCT-CCGTGCA-GACCG-TTTTTCGTTCAATGCAAACCA-TTAATT---------------G--------------TTCG------CA----AAAAT--A-----TTAAGG--TACGGCCCTAGAAACGT-G-CA-GATTGTTCAA--TCCACATTG-G--A-TTAC-C-TAG-AAACATTCAG-AC---T--G-CAA-T-ACATTCCGCT-ATTGGGTCTGAAAATGGAG--------GAAATTGC-TTAGAATTC-AAAAGAAATATTA---TAG-AATTACTTTTAGATAGACTTTTGCA
gi|4 : CCTCA--GAA-AATTG-CAA-CAC-----A--AGT----TT-TACT-CT--GGCATTTA-CA-C-GT-T--GTTC--TAT-AATG-AATTAAA-T---GAA-A-T-A--A----------------------T-AT--AGTG--T-AGAAAGTCCCCT--TAA-TT--AAC--AATTCAAA--AT-TG--A--CA-----A-TTTTGATTT--ATC-G--C-GATTTAC-A-C-AC-TG-ACGC--T-T-CCA-T-ACAT------TTAT-GAC-GTG-T-A--A-GA--TTC-TTGCGAATACAAAA-GT------CATGA-AAAATTTCACTAGCAA------AC--TG-A--T-GA-TTCC-AATG---AC-AG-TTTCTCTG--ACT-TTT-G--ACTTGC-TTTG--TA-T-GT------AA-GG-T-ACATT--AAATGT------ATGATT-T-ATCAACAAAAA-AAGAC--GCTAAA-T-----ACAAA--ATATTGAA-GTCTC-G-AC-TACT--CCATTC--TTCCGG-TTAGAA-AAAGT-------CTATG------TG------------------AA--T--TACTA---T-AA-T------AA-TGT-TTT---TATTTT-CCGCC-TGATTTAATTG----GCTTCTTTT-G-TAC-AAAATATTT-CGGC--AAACG------CT-TTATC-AACTGTAA-TTT-ACGTTATA---ATTGTGATTA----------GCTGGAAGA--GGG----C-ACG--TTCAA-A-AATAC-TAG---GG--T-ATG-GAAGTCTG-TTTCGG-------G-TATTCATTTTCGAAT-TTA--TT-TT-GG-ATTATT-CG--A--------TAGCT---C-TA-TAC---AATCTAAT--TAAA----TCA-ATATCG-TCT-----TT-AA-GCGT-T--CA----T-TTTTCC--ATGT-TAA--------------------TGGTTAGATAAGATGTTATTGCAATT-A-GAT--TTGTC-T--AG-AT-CA-ATGGAC----ATTG---CC-T--T--GTT--------TA----GTGG-GAAT--------------------------------------G--TT-G----GGAATAA---AAATA-CA---T-----AAACAAATGGTCTG-TCA-T-TT-TTTG-TGGCCTT--TAA-CGAA----ACAAG-ATTAAAAAGATG--CGGG----------------GGAAA----TACAATTAGCAT---ATT--CATTC--------CACAAC------TT-C-GT-T-GT-GC-TTGCT---G-GTGACGTAC-ATG-TACATA--TTAA------TTA-TT--CT-TTTATTACT---AC------AT---G--TA--TTTTTGT-T-CTTCATGCTT-T-TGAT------TT-T-G-----TAGT-TT---AT-TTAGTTC---AT------TTTTAG------TTTGA-TTTC---------------AATAT----TATT----------A-TT-CAT-TA-A---GCAG-TACAG-----------AT-ATTT-CAG-CAAGATATTTT--TCC--ACACAC-AT------A---TGT-CA--GT-----------T-TCAATGGAAATATTCTATATATT-AGTGGCTGTGTTGA-TCC--GC-ATTCGTG-CTTGA--AAGGT----GCAAAATTCAAGATTCAA-AA-TT-TAC-AT---ATGTTAC-TATGTACCTATAACTCACCGTCTT-ATA-A----GG--------------TAAAA-----GAG----ATCTAATT-T-TT---C-AGTATTGTA-CT-T---TTAAAAT-A-A--TGATT-A-TGA-AT-C--AA-CGATTATG-A--TATACCGATTTGGACGC-GTG--TA-GA-TCACTACCA-CCT-------T--G---T----TTTCGCT-CCGTGCA-GACCGATTTTTCGTTC-ATGC-AACCA-TTCATTG--------------G--------------TTCt
gi|5 : GC-C-AATTATTGTCA-ACCTAACCTCAA-GAA-AATTG-CAA-CAC-----A--AGGAGATTT-TA-TTCTTGG-CATTTA-CA-C-GT-T--GT-CATTAT-GATG-AATCAAA-T---GAA-A-T-AGAAAA-AAATG--TT-TACCCCAAA--ATC-AGCG--T-AGAAAGTACTAT--TAAATTCAAAC--AATTCAAA--AT-TA--A--CAAGACTA-TTTTGATTT--AGC-GAGC-GATTTAC-A-C-AC-TG-ACGC--T-T-ACA-T-ACAT------T-ATAAAC-GAT-T-A--AGGA--TTC-TTG--AA-AC-AAA-GT------CATGATAAAATTATACTAGCAAC---T-AC--TG-AGTT-GATTTCT-AATGGATAC-AGTTTTCTCTAAAACTATTG-CAGACTTGCATTTGGCTACTCG-------AATGG-TAACTTTTGAAATTTTTTGACATAATCAA-ATCAACAAAAATT-AAC--G-TAAATT-----ACAAAGAATATTTA--GTCTC-GTACGTACTCCCCAT-CTGTTCCGG-TT--GATAAAGTTAAACTTCTA-T------TGTATAACCGGAAGATTAGAAA--TAAT-CTATGTT-GAATTCTGTAAAATGTATTTTCCC-TTTT-CC-TCATGATT-ACT-ATTGTGCCGCTTTTGG-TTC-ATAATATTTCCGGCA-AAACAA-----CT-CTATATAATTGTAAATTTAACGTAATATCTCCTGTGATTA------CACGGCTGGGAGG--AAGGTTAC-ACGT-TTCAACA-ATTAC-TAGAAAGGCTT-ATGCGAAGT-TG-TT-CGGCATAATTGTTATTCA-ATTAGAAT-TTA--TTCTT-GGTATTATT-C-G-A--------TAGCT---CTTATTGC---GATCTAATTCTAAAA---T-A-G-ATTCATCT-----TTATATGCGT-TAAGA----C-TTTTCC--A-GTGaaaacaagc
gi|5 : tAATT-ATAAT--TTATC-TCTAGCATACATAGGAAA----ATTGGAGCA-TA-T--ATTA-------TT----GTGGGAAAT-G---TT--ATATTGTATTTGT--------------ATGATTT-GTGCGGAAATAAGGACA-TA-AA---TT----A------AGATTGG-TCAAT-TT-CT-GATGA-CCTGTTGA-CGAAGCTAACAGC-CTTAAAA-AA------GATAG-GAGGT---GGGCAGGGA----TACAATTA-CAT---ATT--CAGTGATCTTCATCA-AAC------TTTC-TT-TTGC-GCCTTGCA---T-GTGAC-TA-------AGCTG--TTA--------TA-TC--ACACTTATTACT---ACCAG---GT---A--TA---ATT-GT-T-CTTCATG-TT-T-TGATATTGATTTCT-G-----TAGT-TT--TAC-TTAGTTC---AT------TTTgacatggttaagaagaagaataaatgttaagtcttcaaattataatttatctctagcatacataggaaaattggagcatatattattgtgggaaatgttatattgtatttgtatgatttgtgcggaaataaggacataaattaagattggtcaatttctgatgacctgttgacgaagctaacagccttaaaaaagataggaggtgggcagggatacaattacatattcagtgatcttcatcaaactttcttttgcgccttgcatgtgactaagctgttatatcacacttattactaccaggtataattgttcttcatgttttgatattgatttctgtagttttacttagttcatttttcagtttgcatttaattt
gi|6 : tgccaattattgtcaacctaacctcaagaaaattgcaacacaaggagattttattcttggcatttacacgttgtcattatgatgaatcaaatgaaatagaaaaaaatgtttaccccaaaatcagcgtagaaagtactattaaattcaaacaattcaaaattaacaagactattttgatttagcgagcgatttacacactgacgcttacatacattataaacgattaaggattcttgaaacaaagtcatgataaaattatactagcaactactgagttgatttctaatggatacagttttctctaaaactattgcagacttgcatttggctactcgaatggtaacttttgaaattttttgacataatcaaatcaacaaaaattaacgtaaattacaaagaatatttagtctcgtacgtactccccatctgttccggttgataaagttaaacttctattgtataaccggaagattagaaataatctatgttgaattctgtaaaatgtattttcccttttcctcatgattactattgtgccgcttttggttcataatatttccggcaaaacaactctatataattgtaaatttaacgtaatatctcctgtgattacacggctgggaggaaggttacacgtttcaacaattactagaaaggcttatgcgaagttgttcggcataattgttattcaattagaatttattcttggtattattcgatagctcttattgcgatctaattctaaaatagattcatctttatatgcgttaagacttttccagtggacatggttaagaagaagaataaatgttaagtcttca-ACA--TTCAA-ATG-TAAGTAG---GG--T-ATG-GCAGTCTG-TT-CGG-------G-TATTCATTTTAGAATGTTA--TT-TTCGG-ATTATT-CGGGA--------TAGCTTTGC-TA-TATTATAATCTAAT--TAAAAAAATCA-GGATAC-TCT-----TT-CA-GCGTGT-ACA----C-TTTTTCGCA-GTGTAA--------------------C--------------------CAATT---GAT--TTATCAT--AG-ATACA-ATGGAA----ATTA---CA-T--T--ATT--------TT----G-GG-AAAT-T---TTTCCT------TTTGT--------------ATG--TTGG----GGAATAA---CA-TA-CA---TAATTAA------TGATATG-TCA-TGTT-GT-G-TG--CCT--TGG-CAAA----ACAAT-GTT--AA-GATA--GGGGTGG-G-GGT----------------TACA-TTA-CAT---ATTTCCA-----------CA-TAC------------T-T-GC-A------A---T-GTGAC-TATAATG-TATCTA--TCAA------TTA-TTC-AT-TCTATAACT---AT--------------TG--ACTT-GC-TGCTTCATGTTT-T-CGATATTGATTT-T-G-----TAGT-TTTGTACTTTAGTTC---AT------TTTGA-------TTT-A-TTTCT-GTTTT----AA-GAATAT----CATT----------A-TTACAT-TA-AAGGGCAG---CAG-----------AT-ATTT-CAG-CGAGGTATTTT--TTCCAA-ACATCGT------A---TGTACA-TGTA----TAT--GC-TCATTGGAAATATTCC-TATAGTAAGTTGCTGTG-TAACTCTG-GCAATTTGTG-CTTGAACAAGGTTCCGGCGGAATTCAA-ATTCAAGAACTT-TAC-A----------T-TATGTACTAAT-ACTCACCGTGTTAATA-AAG--GGTAAAAAGCTCGGGGTAAAA-----AAG-AGAACCTGCTT-T-TTGTGCAAGTATTGTAGCT-TTGATTAAAAT-AGAACTGATT-AGTGA-ATGC--AATCGATTATG-AATTATA-CGACTTTGACGC-GTGTGTA-GATTTACTA-CAGCCTAA-AACGT--GAA-TTTG-TTTTGCT-CCGTGCA--ACCG-TTTTTTGTTCAATTCAAACCA-TTAATT---------------G--------------TTCGC-----TA----AAAGT--A-----TTAAGAC-TA----CCTAGAAACGTGG-CA-GACTGTTCAAGGTCCACATTG-G--ATTGACGC-TAG-AAACATTCAG-ACCG-T--G-CAA-TGACATTCCGCTGATCGGGTCTGGAAATGGGG--------AAAATGGCATTAG---------------------------ATTACTTTTAAATAGACTTtcagtttgcatttaattt
gi|7 : CCAGT-CCAATT--TGTTA-ACC-AACCTCAA-GAA-AATTG-CAA-CAC-----A--AGG----TT-TA-T-CT--G-CATTTC-CA-C-GT-T--GT-T--TA--AATG-AAATTAA-T---GAA-A-G-A--GAA-AAAAGGTTT-TACCAAAATT-ATC-AGCG--T-AGAAAGTACT-T--TAA-TT--AAC--AATTCAAA--AT-TG--C--CA----CA-TTTTGATTTTTAGCCG--CCGATTTAC-A-C-AC-TG-ACGC--T-TTCCA-T-ACAT------T-AT-GAC-GAG-T-ATAA-GG--ATC-TTG--AA--CAAAA-AT------CATGA-AACATTTCACTAGAAAC---TAAC--TG-A--TAGA-TTCC-AATG---AT-AG-TTTTTC----ACT-TTG-C--ACTTGC-TTTG--TA-TCGT------TATGG-T-ACATTTGAAATTT------ATGATT---ATCAACAAAAA-T-GAC--G-TAAA-T-----ACAAAT-ATATTTAAAGTCTC-G----TACT--CCAT-C--TTCCGGGTTACAATAAAGTTG-----CTA-G------TT------------------AA--T--T-CTA---CAAAAT------AATTGT-TGT---C-TTTT-CC-CC-TGATT-A---A----GTTCCGTTT-G-TACAAAAATATTT-CGGC--AAACAA-----CA-TTATA-AACTATAAATTT-ACGTAATA---CTTGTGATTA------C---GCTGGAAG---------------------A-A-A-TAT-TA----AG--T-ATG-GAGGTATG-TT-CGG-------G-TATTCATTTTAGAAT-TTA--TT-TT-GG--------CGC-G--------TA--------TA-C-C---AATCTAAT--CAAAA---TCA-G-ATCC-TCT-----TT----GC---------------TGGCT--G-ATGTAA--------------------T---------------------GGTG-A-GA----GA------AG-ATGTT-AT---------TTA---CA-T--T--ATT--------CT------------T-T---T--------------GT--------------ATG--TT-G----GGAATAA---CATTA-CA---T-----A------TGATCTG-TCA-T-CT-TT-G-TG--CCT--TGA-CGAA----ACAAC-GTTAAAA-TATG--GGGGGGG-G-GGG---GGGGGGG
gi|8 : tCGCT-ATCGGGTCTGGAAATGGAG--------GGAATGGC-CTAGAATTC--AAAAAAATATTT---TAG-AATC--------ATAGACTTTTGCA
gi|9 : --TATGACCCTAGAAACGT-GGCATTACTGTTCAA--TCCACAT---G--G-TTAC-C-TAG-GAACATTCAG-ACCG-CTCG-CAA-T-ACATTCCGCT-ATCGGGCCGTGAAC--------------GAATGGCCTTAGAATTC-AAAA--AATATTT---TAG-AATTACTTTTGGATAGACTTTTGCAgataatttgaacaaataatgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgattaaaatataaatataaaaatttagctcaaaaccgtgcattcatcgtctattaacagacagaatcaaacactagatgacattttaatgtaagctgtcaaagcatttcgaatgtctcatattacttttttcttctttcacagtgactaaataacaaacgatacttttaaaatcatgtcgttattcaatgtgttagtatttttcaatagaaaatagttatatcttggaacatatttagaggaatgcccatgattcgtaaccaaagcaaaaccacatttataaaatataacatcatttttctaatacttgcacgaattaagatgcaaatatctccgtagccattgcaatggagaggtatgaaaagatg
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): AAAAACCCAAAATTAATATTTAGCTCAAAAACGTGTACCATGTCCTTTAAACAGACCAGAACAAAATCAGATGCATTTTGTAGCTGATCAAAAAGAAATATTGAATGCCTCAACTCTTTTTCTATCTTTCACAGTGCAAATATACAAAACTAACTTTTAAAAATCGTGCTTCGTTATCATGGGTATTGTTTTACATAAGAACTGTTTATCGAACTATTCTTAGAGGAATCCACTGGCATCTAAGCAAAGGCCAATTTATGAAAATAACCATTATTAAAAGAAACAACAGTTTAACTTGCCACAAAAAACACCGCCGTAGCCAATTGGAGACGCTATTTTGAAAAGACG
Unaligned ( gi|15 ): AGAACAAAACCAGATATGCATTTGTTAGCTGTCAAAGCAATTGAATGTCCTCTATTACTTTTTCTATCTTTCACAGTGCAAATATTACAAACGATACCTTTTATAAAATTCATGTTTCGTTATTCAATGTGTATTTGTTTTCAATAAAAAAATTGTTTAATCTGAACCTATTAGAGGAATCCATGGCATTCTAAGCCAAAGCCCACATTATAAAAATTAACCATATTTAACTTGTCAACAGAATTAAGATGCCAAAAACTCCGTAGCCATGCAATGGAGACGTATGAAGAGAT
Unaligned ( gi|16 ): AACAAAAACAGATACATTTTTAGCTGTCAAAGCAATTTGAAATGTCCCTCAACTACTTTTTCTATCTTTCACAGTGCAAATATACAAACGATACTTTTAATAAATCGTGTTTCGTTAATCAATGGGTATTGTTTTCAAAAGAAATGTTTATCGGAACTATTTGGAGGAATCCATGGCATTCTAAGCAAAGCCCACATTTATAAAAATAACCATATTAAAGAAACGACAGTTTTAACTTGCCACAGAAGATGCAAAAATCGCCGTAGCCAATGGAGACGTATGAAAAGATG
Unaligned ( gi|18 ): AGCTGTCAAAGGCAATATTGACCTTCTCTACTACTTTGTTCTATCTTCACAGTGCAAATATACAAAACGATTACTTTTTAATAATCATGATGTTCGTTACAGGTATTGTTTTCATAAAAAAATAGTATCTGAACTAATGAAATCAGAGGAATCCGATGGCCATTCTAAGCAAAACGCCCACATTTTATAACAATTAACCATATTTTAACTTGCCAACCCAGAAATCTTCGAAGCCATGCAATGGAGCACGTTTATGAAA
Unaligned ( gi|21 ): AGACAGAACAAAAGCAGACATGCATTTGGATGCTGTCAAAAGGCAACTTTGAATGTCGCTCTGTAAAACTTTTTCTATCTATTTCACAGTGCCAAAATATTATTAACGATACTTTTTGAAATCTTGTTTCGTGTATTCAATGGGTATTGTTTTCTTTAAAAAAAAA
Unaligned ( gi|26 ): AGATCTTCTGTAACCTTTACACTAGTTCCCCAGTGTTATGGTTAGAGAAGACCTGGCTTTAATTACATGTACCTATGTACATTG