lowQualScore : 1 1111 7777777777777777777777777 1 1 222 3333333333 1 9999999999999999999999999999999999999999999999999 11111 11 11 111 11 222222222 11 333 11 1 11 1 1 1 1 1 33333333 111 22 22 11 444444444444444 55555555 11 1 2222222 11 11 1 111 2222 11 5555555 22 1 1 44444444444444 11111111 4444444444444444444 11111111111 11111 222 1111 22222222222222222 3333 1 11 1 3333333333333 5555555555 11 1111 444 2 111 444444444444 1 1 44444444 1 1111 11 11 1111 4444444 5555555555 11 1 222 111 11 1111 11111111 111 11111 888888888888888888888888 2222222222 11111 4444444444444444444444 1111111 11 11 33333333333333333333 4444444444444 11111111 11 1 55555555555555555 2222222222 11111111 11111111 1111111 111111 22222 11 11 1 1 11 1111 1111
lowQualScore : 0 5 2 4444 3 7777777777777777777777777 0 0 888 2 1111111111 0 4444444444444444444444444444444444444444444444444 22222 8 11 5 33 111 1 88 88 1 5 11 111111111 11 8 2 333 33 0 88 2 3 3 3 3 3 77777777 3 8 000 6 8 5 22 22 11 777777777777777 1 00000000 5 11 1 0 8 1111111 0 8 00 00 0 0 8 5 8 5 777 1 9999 5 0 11 8 2222222 22 0 3 7 2 33333333333333 2 2 00000000 0000000000000000000 44 333 1 3333 55555555555 22222 1 1 4 111 4444 88888888888888888 777 9999 9 2 0 5 5 11 1 2 5555555555555 5 6 77 0000000000 8 5 11 8 2222 77 666 1 222 6 444444444444 6 6 8 0 3 88888888 3 0 6 6666 1 0 66 66 0 1111 3333333 5 4444444444 6 3 88 2 000 1 000 66 4 00 2 4 3333 777 88888888 0 4 4 4 4 4 222 4 4 55 55 77777 666666666666666666666666 3 55 9999999999 22222 7 3 3 0000000000000000000000 2222222 00 2 444 77777 3 2 2 55 3 3 3 888 1 55 3 00 4 0 7777 33333333333333333333 6 6666 7777777777777 3 6 6 44 22222222 3 3 666 3 3 44 55 8 2 3 44 1 66 666666 3 3 3 1 55 44444444444444444 7777777777 3 999 3 3 44 3 3 6 22222222 3 3 88888888 3 1111111 77777 3 777 4 2 222222 8 8 1 11111 44 11 3 0 666 55 3 0000 7777 3 8888 3 8 2 0000 66 3 5
lowQualScore : . . . .... . ......................... . . ... . .......... . ................................................. ..... . .. . .. ... . .. .. . . .. ......... .. . . ... .. . .. . . . . . . ........ . . ... . . . .. .. .. ............... . ........ . .. . . . ....... . . .. .. . . . . . . ... . .... . . .. . ....... .. . . . . .............. . . ........ ................... .. ... . .... ........... ..... . . . ... .... ................. ... .... . . . . . .. . . ............. . . .. .......... . . .. . .... .. ... . ... . ............ . . . . . ........ . . . .... . . .. .. . .... ....... . .......... . . .. . ... . ... .. . .. . . .... ... ........ . . . . . . ... . . .. .. ..... ........................ . .. .......... ..... . . . ...................... ....... .. . ... ..... . . . .. . . . ... . .. . .. . . .... .................... . .... ............. . . . .. ........ . . ... . . .. .. . . . .. . .. ...... . . . . .. ................. .......... . ... . . .. . . . ........ . . ........ . ....... ..... . ... . . ...... . . . ..... .. .. . . ... .. . .... .... . .... . . . .... .. . .
lowQualScore : 7 0 2 2222 2 0000000000000000000000000 0 0 555 5 5555555555 0 0000000000000000000000000000000000000000000000000 66666 0 00 4 88 888 4 00 88 4 4 00 444444444 00 0 5 222 88 0 33 0 3 3 3 3 3 00000000 2 0 000 2 0 0 00 00 00 444444444444444 4 00000000 0 00 4 6 0 2222222 8 0 44 00 8 6 0 0 0 0 444 8 0000 6 6 00 0 0000000 00 6 3 0 0 88888888888888 0 0 00000000 1111111111111111111 11 333 8 9999 99999999999 11111 7 7 1 555 8888 00000000000000000 000 5555 8 2 0 7 0 99 8 1 9999999999999 2 7 55 0000000000 0 0 00 0 6666 88 666 0 666 0 444444444444 0 4 0 8 5 33333333 7 8 7 4444 4 6 66 44 6 6666 0000000 7 3333333333 7 0 33 0 777 0 444 11 4 99 7 4 9999 888 44444444 7 0 0 0 0 0 555 0 0 55 55 00000 000000000000000000000000 9 00 0000000000 77777 3 9 6 2222222222222222222222 9999999 00 3 888 55555 6 1 0 00 6 6 6 444 2 00 6 44 0 8 7777 88888888888888888888 5 5555 8888888888888 3 9 7 33 11111111 6 6 666 1 6 11 00 2 4 3 66 2 55 555555 6 6 6 9 00 22222222222222222 7777777777 3 222 3 3 66 3 3 7 11111111 3 6 66666666 6 6666666 22222 1 888 4 7 888888 9 9 1 77777 22 00 0 2 444 99 6 1111 1111 3 7777 3 6 4 4444 11 0 0
consensus : ATTCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGA-AAGAA-GGAA-GGNACGTGCAGG-----TGGG-TCTGTG-TCC--C--ATTTTTT--ACACAT-GATTT-TTT-AAAA--TG-ATCGGATAAG--AGAA-TA--CCACGATTGAAAAA--ATACTCACTTCTATT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TNAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGNATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCG-T-AGTTCATTTC-AATGAA-TNTCAANTATT-ATCTAAGTCACACTCGGCTT--CATGACGTGAAATG----------TTTTAGAATTTGA--A--AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGACCGTATTTG-ATAGGAATCGCTGTGTTAGGCATG--TGCCCACA-TTGATATATCTC--A-TTTCCTACATGTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA-----N------CGC-CC-CCTT--------CTC--C-T----ATC---G--ACGACGA-TAG---G-A----GA----------GGGGGGGGG--CT-GGTTTT-AATCAGACTG-TTTGT--A-TTTTTATG-AAAGTTTGNG-CGC-CCCCCCCCCCCATT-T--TTTAAGCCCA-GCTT-TATGAAAGTTT--GTGCCCCCCC----A-C-T--TTTTTTAGCCCAGCTT-TA-TGAAAGTTTGTGCCCCCC--------CATT-TTTTAGCCCAG--TT-A-CGCCACTGTCCGGGCATGNAAATTG---GTGGAGGGGTA-TTATCCCCACTTT-TGGGGGGGGGGTAATC-TTCNCTG-TTCTTTTGTAAAT--------ACATGNAAAGTT-GGG-TNTTTTTTATTATAAGGAAAGTAA--GATGT-C-C---TGGTGA-TC---------AGCAAAACATTNATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAG--CAT--ATAGTG-CG-CCCTCTGGTGT-AAT----A---ATG---A----GGCATTAAATGATAAACG-CCCTCTGGTGTAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAA-----CA----------A-------------TTTAC--ATGAAAA-N------C-AA-----A-GTAGAT-CGAT---------------------NAA-T----GACGAAGC--AAAATAGAA-T-TTA-A---G-ATTACA--AATG-TAAAT-TG-AA-ATGTTAT--G-ATAN-AACATGG-AATTTAAAGAT--GTCAT-----TATA-G-TAAAT-CAANGG----TTAGAATTA----T-A-A-A--ATACAAGGAG-GAT-GCATG-GAAT--------G-AA-GAATG--TCATG-AAGCAAA--ATAGCATTTAGAA-TAAA--AGTTAGCATT-AAGAATACAA---G--G-AG-G-ATGCATAA--AAAT-AA----A---A-A---AAAAC--G-------AAATG-CA---ATAT-TGT-AACA--TGG-AA-TT-AA--------G-GATG-TC--A-----TGT-AGG------AA--A--TTAGGA---AT-GGAGA------TT-GA-AATGACA--CAAGGTAACATGGGATTT--AAAATGTCATAAA---AGT--AAA-ATACAA-A--TTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATT--CCNT-TCC
Reference ( gi|2 ) : ATCCAGGACGAGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGA-AAGAA-GGAA-GGGACAT--AGG-----TGGG-TCTGTG-TC------ATTT-----ACATAT-GA-----------A--TG-ATT--ATAAG--AGAA-TA--TCATTATTGAAAAA--ATGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGT--CACT--GCTT--CATGATGTGAAATG----------TTTTAGAATT--A-----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--A-TTTC-------TATCTCCTA--TTGCTTTGT-AATTCATTCTGATTAAAA-CCA-----C------CAC-CC-CCTT--------CTC--A-T----AT----G--ACGACGA-CAG---G-A----GA----------GGGGGGGGG--CT-GGTTTT-AATCAGATTA-TTTGT--A-TTTTTATT-AA-GTTTGGG-CGC-CCCCCCCCCCCATTAA--TTTAAGCTCA-GCTT-TGTGAAAGTTT--GTGTCACCTT----A-C-T--TTTTTTAGTCCAGCTT-TA-TGAAAGTTTGTGTCCCCT--------C-TT-TTTTAGGTCAG--TT-A-CATCACTGTCCAGGCATGGGAATTGTT-GTGGTGGGGTA-TTATCTCCACTTT-GGGGGGGGGGGTAATC-TTCGCTG-TTCTTTTGTAAAT--------ACATGCAACATT-GGG-TTTTTTTT-TTATAAGGAAAGTAA--GATGT-------TGGTGA-TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAG--AAT--ATAGTG-CA-CCCTCTGATGT-AAT----A---ATG---A----GGCACTAAATGATAAACG-CCCTCTGGTGTAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAA-----CA----------A-------------TCTAC--ATGAAAA-G------C-AA-----A-GCAGAT-CGAT---------------------TAA-T----AACGAAGC--AAAATAGAA-T-TTA-A---G-ATTACA--AATG-TAAAT-TG-AA-ACGTTGT--G-ATAA-AACATGG-AATTTAAAGAT--GTCAT-----TATA-G-TAAAT-TAATGG----TTAGAATTA----TTATA-A--ATACAAGGAG-GGT-GCATG-AAAT--------G-AA-GAATG--CCGTG-AATTAAA--AGAACATTTAGAA-TAAA--AATTAGCATT-AAGAATACAA---G--G-AG-G-ATGGATAA--AAATAAA----A--AA-A---AAAAC--G-------AAATG-CA---ACAT-TGT-AACA--TGG-AA-TT-AA--------G-GATG-TC--A-----TGT-AGG------AA--A--TTAGAA---AT-GGAGA------TT-GA-AATGACA--GACGGTAACATGAGATTT--AAATTGTCATAAA---AGT--AAA-ATACAA-A--TTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATT--CCAT-TCC
gi|1 : ATCCAG-ACGAGCGTATGACGAAAGGAGGGGGGGGGGGGGGTGAGGCATATGGCCCCTTACAGATTTGAGAAGAAAGGAATGGGACAA--AGGATATATGGGATCTGTGATC------ATTT-----ACATAT-GA-----------AAATG-ATT--ATAAG--AGAAATA--TCATTATTGAAAAA--ATGCTCACTCCTTTTTATGCAGGTTCTAG-CTGT--CAAAA---CGT-TGAAATCATATTATCTCTGTA-TCC--ATGCTCAGTATATTTAATTACCGACTTAATTTTAGCTATTTTTCTGGTGAATCCTTACAATTCCTGCTTGTTCCACGCAATCTAACAACGGTGGTAAATGAAAGTTTTAATAATAATCAATGAGTTCATTTCCAATGAAATTTCAAATATTCATCGAAGT--CACT--GCTCTCCATGATGTGAAATG----------TTTTAGAATT--A-----AGTGAGATCTTGATTCGAACAATCGGGCAATCT-AACAAA-GAGTTTCCTGGACTATTAGACCT-CGGA-TATAGGATGACTGCCCGTATTTGGATAGGAATCGCTCTGTTAAGCATGGTTACCCACAATTGATATATCTCTAA-TTTC-------TAT-TCCTA--TTGCTTTGT-AATTCATTCTGATTAAAAACCA-----C------CAC-CC-CCTT--------CTC--AAT----AT----G--ACGACGAACAG---GGA----GA----------GGGGGGGGGGCCT-GTTTTA-AATCAGATTAATTTGT--A-TTTTTATT-AA-GTTTGGGGCGC-CCCCCCCCCCCATTAAAATTTAAGCTCAAGCTT-TGTGAAAGTTTTGGTGTCACCTT----AAC-TC-TTTTTTAGTCCAGCTT-TAATGAAAGTTTGTGTCCCCTATCGACTTCATT-TTTTAGGTCAG--TTTA-CATCACTGTCCAGGCATGGGAATTGTTTGTGGTGGGGTAATTATTCCAACTTTGGGGGGGGGGGGTAATC-TTC-CTG-TTCTTTTGTAAAT--------ACATGCAACATTGGGG-TTTTTTTT-TTATAAGGAAAGTAA--GATGT-------TGGTGATTT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAAAAT--ATAGTG-CATCCCTCTGATGTAAAT----A---ATGA--A----GGCACT-AATGATAAACGCCCCTCTGGTGTAA-TAATTGTGAA-CATTAA---A-TAA--ACGAATG--CAA-----CA----------A-------------TCTAC--ATGAAAA-G------C-AA-----A-GC-GAT-CGAT---------------------TAA-T----AACGAAGCAAAAAATAGAA-T-TTA-AAAGA-ATTAC---AATGCTAAAT-TGAAA-ACGTTGTTGG-ATAA-AACATGGAAATTTAAAGAT--GTCAT-----TATATGTTAAAT-TAATGG----TTAGAATTA----TTATA-A--AT-CAAGGAG-GGTGGCATGAAAAT--------G-AA-GAATG--CCGTGAAATTAAA--AGAACATTTAGAA-TAAA--AATTAGCATTAAAGAATACAA---G--GAAG-G-ATGGATAA--AAAT-AA----A--AA-A---AAAAC--G-------AAATGCCA---ACAT-TGTAAACA--TGGAAA-TT-AA--------G-GATGTTC--A-----TGT-AGA------AAATA--TTAGAA---AT-G--GA------TT-GA-AATGACA--GACGGTAACATGAGATTT--AATCTGTCATAAA---AGTA-AAA-ATACAATA--TTAGAATT----AAGAATAACA-AAAAGGATGC-ATATAATCATGA---CGGTGATT--CCAT-TCC
gi|3 : aaATTCAGCACGGGCGTATAAC------AGGGGGGGGGGGGG---------AT---------C---TTTGG-AAGAA-GG---GGCACGTGCAAG-----TGAG-TTTGTG-CCCCTCCCACTTTTTA-ACACAT-AATTTCTTTTAAAA--TG-ATCGGATAAG--A--A-TG--CCACGATT--AAAA--ATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAAATGTAT-TTAA--CATATT-TCACTGAA-TCCATATNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN-NNNNNNN-NNNNN-NNNNNNNN-NNNNNNNNNNNN-NNN-N-NNTTCA------ATGAA-TATCAATTATT-GTGTAGGTCACACTCGGCTT--AATGACGTGG---------------TTTAAAATTTGACAAC-AATGACGTCT--ATTCGAACTA-CATGTA-TC-------AAGAGTCTC-TGGAATAAAGGACCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTAATATCTTTC--A-TTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATTt
gi|4 : aaattattcaatgactttcgaaacgggtgagataaATTCAGCACGGGCGTATAACAGA-GG-GGGGTGGGGGGGA-T--------------CTT------TGGA-GAGAA-GG---GGCACGTGCAAG-----TGAG-TTTGTG-CCCTCC--ACTTTTTTAACACAT-AATTTTTTTAAAAA--TG-ATCGGATAAG--A--A-TG--CCACGATT---AAA--ATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAA---TGTATTAA--CATATT-TCtttatgaaaggttgtgccctcctacatttttttatcccagctttatgaaagtttgtgcccccccttgttttagcccagctatgccactgtccggacatgtaaattagcggagggtattatcctcactttttggggttaacattctctgttctttttaaaataccttttcacatggaaagtaagatatatgtgactatggaagggaattgccgccctctggtgatcgaatttgtcagcaaacaattcatccgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgtgacattaaataatgaacgccctctggtgtaataatgagatatggaatgacgaatgcaacaaagcataatagtatttacataaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatataaggaggatgcataaaaatagaaaacttaaattcaatattgtaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaaggaagaattttaaaattgtcataacagtaaaaatacagtagaattaagaataacagaatgcata
gi|8 : aAGGCCGGGCGTATGACGAA-GGAGGGGGGGGGGGG--TGAGGCATATG--CCCTTACAGATTTGA-AAGAA-GGAA-GGGACAT--AGG-----TGGG-TCTGTGGTC------ATTT-----ACATAT-GA-----------A--TG-ATT--ATAAG--AGAA-TA--TCATTATTGAAAAA---TGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-AATCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAAT---CA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGT--CACT--GCTT--CATGATGTGAAATG----------TTTTAGAATT--A-----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--A-TTTC-------TATCTCCTA--TTGCTTTGT-AATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|9 : -TC------TTTT-----ACA-ATAGA-----------A--TGGA----ATCAGTTAGAA-TAAACGATGGTTAAAAAAAAATACTCAGTTCTATT--TGTAGGTTCTCAGCAGTTGCAAAA---T------A--CAAATT-TCT-TG----CA--ATGCACACAATCTGTA-TT
gi|5 : atgtataaattatataaaatgtaaggaaccggaaataggtaaatataaatcttcattgaaatctgccaaacatcaattctttgatcttgtaggtgtcttagtttttatttttacatacatagtagttctgcaatagatagacttgccagaaaaaggcttgcaggataaaacattgtccagaaaggatgtaggggggggggggggatatggcgggggaggcgggggggccagcgagtggggacaaagttgtttcgataaacccccccccccgcccactttgttgtttaaaaacacaaattTTTTAATAAT---CG-T-ATTTCATTTA-AAT-----------TATT-ATCTAAGT--CACT--GCTC--CATGACGTGAAATGCCGAGAATTTTTTTTTAATT--A-----AGTGACGTCC--ATTCGAACAATCGGGCA-TTTGAACAAAAGAGTCTC-TGGACTATCGGACCTTTGGAATATAGGATGA-TGACCGTATTTG-TTAAGAATTGCTGTGTTAGGCAT----------A-TCG----ATCTC--ATTTTC-------AATCTCCTA--TTGCTTTGC-TATTCATTCTTACTAAAA-ACA-----C------ga
gi|4 : TTC-AATGAA-TATCAATTATT-GTGTAGGTCACACTCGGCTT--AATGACGTGG---------------TTTAAAATTTGAACAACAATGACGT-T--ATTCGAACTA-CATGTA-TTC------AAGAGTCTC-TGGAGTA-AAGGCCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTACTATCTTTC--A-TTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaatttttatgaaagtgtgtgtcccccccccttttatgcccagctttctgaaagtttgtgccccatcattttttaggtcagttacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|1 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-AATTAAT-CTGATTTAAA-ACAGGC--C------CCC-CC-CCCT--------CTC--CCT----GT----T---CGTCGT-CATATTG-A----GA----------AGGGGGTGG---T-GGTTTTTAATCAGAtttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|26 : aaatccagacgagcgtatgacgaaaggaggggggggggggggtgaggcatatggccccttacagatttgagaagaaaggaatgggacaaaggatatatgggatctgtgatcatttacatatgaaaatgattataagagaaatatcattattgaaaaaatgctcactcctttttatgcaggttctagctgtcaaaacgttgaaatcatattatctctgtatccatgctcagtatatttaattaccgacttaattttagctatttttctggtgaatccttacaattcctgcttgttccacgcaatctaacaacggtggtaaatgaaagttttaataataatcaatgagttcatttccaatgaaatttcaaatattcatcgaagtcactgctctccatgatgtgaaatgttttagaattaagtgagatcttgattcgaacaatcgggcaatctaacaaagagtttcctggactattagacctcggatataggatgactgcccgtatttggataggaatcgctctgttaagcatggttacccacaattgatatatctctaatttctattcctattgctttgtaattcatCAGTCTGATTAAAA-CCAGTCCCC------CCC-CC-CCTT--------TTC----T-----T----G--ACGACGA-TAG---G-A----GA-------------AAGGGG--CT-GGTTTT-AATCAGACTtgtatttttattaagtttggggcgccccccccccccattaaaatttaagctcaagctttgtgaaagttttggtgtcaccttaactcttttttagtccagctttaatgaaagtttgtgtcccctatcgacttcattttttaggtcagtttacatcactgtccaggcatgggaattgtttgtggtggggtaattattccaactttggggggggggggtaatcttcctgttcttttgtaaatacatgcaacattggggttttttttttataaggaaagtaagatgttggtgatttagcaaaacattaatccgggattttcgaaacttaacattcattgtagaaaatatagtgcatccctctgatgtaaataatgaaggcactaatgataaacgcccctctggtgtaataattgtgaacattaaataaacgaatgcaacaatctacatgaaaagcaaagcgatcgattaataacgaagcaaaaaatagaatttaaaagaattacaatgctaaattgaaaacgttgttggataaaacatggaaatttaaagatgtcattatatgttaaattaatggttagaattattataaatcaaggagggtggcatgaaaatgaagaatgccgtgaaattaaaagaacatttagaataaaaattagcattaaagaatacaaggaaggatggataaaaataaaaaaaaaacgaaatgccaacattgtaaacatggaaattaaggatgttcatgtagaaaatattagaaatggattgaaatgacagacggtaacatgagatttaatctgtcataaaagtaaaaatacaatattagaattaagaataacaaaaaggatgcatataatcatgacggtgattccattcct
gi|29 : CAGTCTGATTAAAA-CCA-----G------C-C-CC-CCTT--------CTC--C-T----ATC---G--TCGACAA-TAG---G-A----GA------------AGGGGGG--CT-GGTTTT-AGT
gi|25 : CAGTCTGATTAAAA-CCA-------------AC-CTACCTT--------CTC--C-T----ATC---G--ACGGCGA-TAG---G-A----GA------------AGGAGGT--TT-GGTTTT-AATCAGACT
gi|25 : acCAGTCTGATTAAAA-CCA-----A-------AC-CT-CCTT--------CTC--C-T----ATC---G--CCGTCGA-TAG---G-A----GA----------AGGTAGG----TT-GGTTTT-AATCAGACTg
gi|31 : accCAGTCTGATTGAA----------C------CA--------T--------CTC--A-C----CT----G--ACGACGA-TGA---G-T----GA----------AGGAGGGG---CT-CGTTTT-AATCAGACT
gi|27 : CAGTCTGATTAAAA-CAA-------------GT-CC-CCTT--------CCC--C-T----ATC---G--ACGACGA-T-------A----GA----------TGGGGAGGG--GT-G--TGT-GATCAAACT
gi|28 : aTCTGATTAAAA-CCA-----G------T-C-CC-CCTT--------CTC--C-T----ATCGTCG--TCGACGA-TAG---G-A----GA----------AGGGGG-----CT-GGTTTT-AATCAGgg
gi|26 : TCTGATTAAAA-CCA-------------GC-CC-CTTT--------CTC--C-T----AT--------CGTCGT-CAA---G-AAAAGGG----------GGGGGGGGA--CT-GGTTTT-AATCAGACTc
gi|23 : cTCTGATTAAAA-CCA-------------GC-CC-CCTT--------CTCCTA-TCGTCAT----G--ACGACGA-TAA---G-A----GAAAAAAAAAAGGGGGGGGGG--CT-GGTTTT-AATCct
gi|32 : gTCTGATTAAAA-CCA-----G------C-------------------------------T----G--ACGACGA-TAG---G-A----GA----------AGGGGG-----CT-TGTTTT-AATCAGACTc
gi|32 : agTCTGATTAAAA-CAA-------------GC-CC-CCTT--------CTC--C-T----AT--------CGTCGT-CA-------------------------------G--CT-GGTTTT-AATCAGACT
gi|35 : TCTGATTAAAA-CCA-----G------C-C-CC-CCTT--------CTC--C-T----AT----ct
gi|31 : gTCTGATTAAAA-CGA-----G------CCC-CT-CCTTCA------CTC--A-T--------------CGTCGT-CAG---G-T----GA----------GA----------T-GG-TTC-AATCAGACTcgtcgtcactg
gi|24 : cTCTGATTTACC-CCA-----CTCATCCCAC-CC-CTTT--------GTC----T----ATTCT-G--ACGACGA-TAG----------GA----------GGAGAAGGG--CT-GGTCTC-CATCAAACTct
gi|28 : aaCTGATTAAAA-CCA-------------GC-CC-CCTT--------CTC--C-T----ATCGTCG--ACGACGA-TAG---G-A----GA------------AGGGGGA--CT-GGTTTT-AATCAGAtc
gi|23 : GATTAAAA-CCAGCC--C------CCC-CC-CCTTTTTTTTTTCTC--T-T----ATCGTCGTCATGACGA-TAG---G-A----GA----------AGGGGG-----CT-GGTTTT-AATCAGAc
gi|29 : gACTAAAA-CCA-----G------C-C-CC-CCTT--------CTC--C-T----ATT---G--TCGACGA-TAG---G-A----GA----------AGGGGGG----CT-GGTTTT-AATCAGACTc
gi|27 : c------CACACC-CCTC--------CCC--A-TCT--ATC---G--TCGTCGA-TAG---G------------------GGAAGGGGA--CT-TGTTTT-AATCAGACTG-T
gi|35 : T----G--ACGACGA-TAG---G-A----GA----------AGGGGGG----CT-GGTTTT-AATCAGAtgatcaaactgg
gi|37 : gCGGCGA-TAG---G-A----GA----------AGAGGG-----CTTGGTTTT-AATCGGACTctg
gi|38 : -A----GG----------GGGGGGGGG--TT-GGTTTT-AACCAGA
gi|5 : aaaaaaaGGGA--CT-GGTTTT-AATCAGACT-----GC--AATTTTTATG-AAAGT--GTG-TGT-CCCCCCCCCT--------TTTATGCCCA-GCTT-TCTGAAAGTTT--GTGCCCCATC----A------TTTTTTAGGTCAGTTc
gi|3 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTG-CTTGTCAA-TTTTTATG-AAAGGTTGTG-C------CCTCCTACATTTT--TTTA-TCCCA-GCTT-TATGAAAGTTT--GTGCCCCCC-------C-T--TGTTTTAGCCCAGCTacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|19 : aaattattcaatgactttcgaaacgggtgagataaattcagcacgggcgtataacagggggggggggggatctttggaagaaggggcacgtgcaagtgagtttgtgcccctcccactttttaacacataatttcttttaaaatgatcggataagaatgccacgattaaaaatactcatttctaatatgctggttatcagctgtcaaaaatgtatttaacatatttcactgaatccatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgacaacaatgacgtctattcgaactacatgtatcaagagtctctggaataaaggacctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttaatatctttcattttctacatgtatctcttgtt--A-TTTTTATGAAA-GTTTTGA-GACACCCTCCTCACTATT-T--TTTCAGCCCA-GCTTATATAAAAGTTT--GTGTC-CCTC----A-C-----TTTTTAGCCCAGCTT-TA-atgccactgtccggacatgtaaattagcggagggtattatcctcactttttggggttaacattctctgttctttttaaaataccttttcacatggaaagtaagatatatgtgactatggaagggaattgccgccctctggtgatcgaatttgtcagcaaacaattcatccgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgtgacattaaataatgaacgccctctggtgtaataatgagatatggaatgacgaatgcaacaaagcataatagtatttacataaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatataaggaggatgcataaaaatagaaaacttaaattcaatattgtaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaaggaagaattttaaaattgtcataacagtaaaaatacagtagaattaagaataacagaatgcata
gi|3 : gctgtgcaTT-TATGAAAGGTT--GTGCCCTCCT----A-CAT--TTTTTTATCCCAGCTT-TA-TGAAAGTTTGTGCCCCCC--------C-TTGTTTTAGCCCAG--CT-A-TGCCACTGTCCGGACATGTAAATTA---GCGG-AGGGTA-TTATCCTCACTTT-TTGGGGT----TAACA-TTCTCTG-TTCTTTTTAAAATACCTTTTCACATGGAAAGTA-AGA-TATATGTGACTAT--GGAAGGGAATTGCCGCCCTC---TGGTGA-TCGAATTTGTCAGCAAACAATTCATCCGGGTTATTTT--AAAGGGAGAATTCATTGTAG--CAT--GTAGTG-CG-CCCTCTGGTGT-AATTAATACGTATG---T----GACATTAAATAATGAACG-CCCTCTGGTGTAA-TAA-TGAG-A-TATGGA---A-T-G--ACGAATG--CAA-----CA----------AAGCATAATAGTA-TTTAC--ATAAAAA-A------C-AATTCAAATGTAGAT-CGAT---------------------GAAAT----GACGCATC--GAAAT---------------G-A----A--AATG-TAAAT-TG-AA-ATGTTAT--G-ATAT-AACATGG-GATTTAAAGAC--GGCATATACATGTA-G-TAAAT-CAAAGT----TTAGAATTA------A-A-A--ATACAAGAAG-GAT-GCATG-GAAT--------G-AA-GAATG--TCATG-AAGCAAA--ATAGCATTTAGAA-TAAA--AGTTAGCATT-AAGAATATAA---G--G-AG-G-ATGCATAA--AAAT-----------A-G---AAAACT-T-------AAATT-CA---ATAT-TGT-AACA--TGG-AT-TT-AA--------G-GATG-TC--ATGTACTGT-AGC------AA--T--TTAAGA---AT-GGAAA------TT-GATATTGACA--CAAGG-AA---GA-ATTTTAAAATTGTCATAAC---AGTA-AAA-ATACAG-----TAGAATT----AAGAAT-----AACAGAATGC-ATAgctccactgcctcaat
gi|5 : aaattattcaatgactttcgaaacgggtgagataaattcagcacgggcgtataacagggggggggggggatctttggaagaaggggcacgtgcaagtgagtttgtgcccctcccactttttaacacataatttcttttaaaatgatcggataagaatgccacgattaaaaatactcatttctaatatgctggttatcagctgtcaaaaatgtatttaacatatttcactgaatccatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgacaacaatgacgtctattcgaactacatgtatcaagagtctctggaataaaggacctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttaatatctttcattttctacatgtatctcttgttttgcttgtcaattTT-TATGAAAGTGT--GTGTCCCCCC----C-C-C--TTTTAT-GCCCAGCTT-TC-TGAAAGTTTGTGCCCCAT--------CATT-TTTTAGGTCAG--TT-A-CGCCACTGTCCAGGCATGACAATTG---GTCGAGGGG-G-TTATCCCCACTTT-----ATGGGGGTTATCGTTCACTGTTTTTTTTGTAAAT--------ACATGTAAAGTT-GG----TTATTT-TCACATGGAAAGTAA--GATGT-------TGGTGA-T
gi|19 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaattTT-TATGAAAGTTTT-GAGACACCCTCCTCA-C-TATTTTTTCAGCCCAGCTTATA-TAAAAGTTTGTGTCCCTC--------A-CT-TTTTAGCCCAGCTTT-AGCTCCACTGCCattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|4 : gctgtgcaattGAAAGGTT--GTGCCCTCCT----A-CAT--TTTTTTATCCCAGCTT-TA--GAAAGTTTGTGCCCCCC-----------T-TTTTAGCCCAG--CT-A-TGCCACTGTCCGGACATGTAAATAGC----GG-AGGGTA-TTATCCTCACTTT-TGGGGT-----TAATCATTCTCTG-T-CTTTTA-AAATACCTTTTCACATGGAA-GTA-AGA-TATATGTGACTAT--GGAAGGGAA--T-TGTGCCCCTCTGGTGA-TCGAATTTGTCAGCACACAATTCATC-GGGTTATTTT--AAAGGGAGAATTCATTGTAG--CAT--GTAGTG-CG-CCCTCTGGTGT-AATT---A---ATACGTATGTTGACATTAAATAATGAAC--CCCTCTGGTGTAA-TAA-TGAG-A-TAG-GG---A-T-G--ACGAATG--CAA-----CA----------AAAGCTAATTAGTATTTAC--ATAAAAA-AACAATTC-AA-----ATGTAGAT-CGAT---------------------GAAAT----GACGCATC--GAAAT---------------G-A----A--AATG-TAAAT-TG-AA-ATGTTAT--G-ATAT-AACATGG-GATTTAAAGAC--GGCATATACATGTA-G-TAAAT-CAAAGT----TTAGAA--A----TTAAA-A--ATACAAGAAG-GAT-GCATG-GAAT--------G-AA-GAATG--TCATG-AAGCAAA--ATAGCATTTAGAA-TAAA--AGTTAGCATT-AAGAATATGA---A--G-AG-GAATGCATAA--AAAT-----------A-G---AAAACTTA-------AAATT-C----ATAT-T-T-AACA--TGG-AT-TT-AA--------G-GATG-TC--ATGTACTGT-AGC------AA--T--TTAAGA---AT-GGAAA------TT-GATATTGACA--CA-AGTAACAGGA-ATTT--AAAATGTCAT-AA---AGTA-AAA-ATAC-A-G--TTAGAATT----AAGAAT-AC----AAGAATGC-ATATtcaat
gi|22 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaagggaagcccagtgggaacACTGTCCAGGCATGGAAATTG---GTGGAGGGGT---TATCCCTACTTT-TGGAGGGT---TAACG-TTCAATG-TTCTTTTGTAAAT--------ACATGTAAAATT-GGt
gi|6 : CTTTTGTAAAT--------ACATGCAACATT-GGGGTTTTTTTT-TTATAAGGAAAGTAA--GATGT-------TGGTGA-TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAG--AAT--ATAGTG-CA-CCCTCTGATGT-AAT----A---ATG---A----GGCACTAAATGATAAACG-CCCTCTGGTGTAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAA-----CA----------A-------------TCTAC--ATGAAAAAG------C-AA-----A-GCAGAT-CGAT---------------------TAA-T----AACGAAGC--AAAATAGAA-T-TTA-A---G-ATTACA--AATG-TAAAT-TG-AA-ACGTTGT--G-ATAA-AACATGG-AATTTAAAGAT--GTCAT-----TATA-G-TAAAT-TAATGG----TTAGAATTA----TTATA-A--ATACAAGGAG-GGT-GCATG-AAAT--------G-AA-GAATG--CCGTG-AATTAAA--AGAACATTTAGAA-TAAA--AATTAGCATT-AAGAATACAA---G--G-AG-G-ATGGATAA--AAATAAA----A--AA-A---AAAAC--G-------AAATG-CA---ACAT-TGT-AACA--TGG-AA-TT-AA--------G-GATG-TC--A-----TGT-AGG------AA--A--TTAGAA---AT-GGAGA------TT-GA-AATGACA--GACGGTAACATGAGATTT--AAATTGTCAT-AA---AGT--AAA-ATACAA-A--TTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATT--CCAT-TCC
gi|5 : -TC---------AGCAAAACATTAATCCGGG--TTTTTTGAAAGGGCGCATTCATTGTAG--CAT--ATAGTG-CG-CCCTCTGGTGT-AAT----A---ATG---A----GGCACTAAATGATAAGCG-CCCTCTGGTATAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATGAAAA-A------CGAA-----A-GTAGAT-TGAT---------------------AAA-T----GACGAAGC--AAAATAG-----------------------AATG-TAAAT-TG-AA-ATGTTAT--G-ATA
gi|13 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaatttttatgaaagtgtgtgtcccccccccttttatgcccagctttctgaaagtttgtgccccatcattttttaggtcagttacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttg-TC---------AGCAAAA-ATTCATCCGGG--TTTTTTGAAAGGGAGCATTCGTTGTGG--CAT--ATAGTG-CG-CCCTCTGGTGC-AAT----A---ATG---A----GGCATTAAATGATAAAAG-CCCTCTGGTGTAA-CGA-TGTG-A-CATTAA---A---A--AT-AATG--CAA-----CA----------A-------------AGCAT--AATAAAA-T------T-GAC----A-GTAGAT-CGATACTTACTGACGAAGCAAAATATAA-TTTAAGATGAAGC--AAAATATAA-T-TTA-A---G-ATTACA--AATA-TTAAT-TG-AA-ATGTTAT--G-ATAT-AACATGG-AATTTGAAGAT--GTCA------TATA-G-TAAAG-CAAATG----TTAGta
gi|21 : gcttgTTGTAA--CAT--ATAGTG-TG-CCCTCTGGTGT-AAT----A---ATG---A------CATTAAATGACAAACG-CCCTCTGGTGTA---GA-TGTG-G-CATTAA---A-T-A--ACAATTG--CAA-----CA----------A-------------
gi|18 : G--AATTCATAGGGGCG-CCCTCTGGTAT-AAT----A---ATG---T----GACATTAAATAACGAAaac
gi|14 : aggcagacttatG--AAC--GCAATG-C---CCTCTGGCGT-AAT----A---ATG---A----AACATGAAATGATAAATG-Ctgcaatgaagcataataggatttacatgaaaacgaaaatagttcgataaatgacaaagcaagatagaatttaagattaaatggaatttaaagatcaaaggttagaattaa
gi|18 : gcCG-CCCTCTGGTATAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAATGAAGCATAATAGG---A-------------TTTAC--ATGAAAA-C------G-AA-----A-ATAGTT-CGAT---------------------AAA-T----GACAAAGC--AAGATAGAA-T-TTA-A---G-ATT--A--AATG--GAAT-TT-AA-Aaatgacaggattaacaagaaagatgaaacgggaactgtagatggaatctataaaattggatgttgaattgcacggtcgtaaattagaattttaaatgtaacgaatgcgaaaatacaatgaggtgagaaggaatattgtaagaatgaaacaaaatgaaagcaaaaggaaaactgaaaccaaagttagaattaagaatacctgaagggtgcatagaattatggcagtatttcgattccat
gi|16 : aggcagacttatgaattcatagggg-CCCT-TGTTGTAA-TAA-TGTG-A-CATTAACGAA-T-A---CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATGAAAA-C------G-AA-----A-GTAGAT-CGAT---------------------AAA-T----GACGAAGC--AAATAAGAA-T-TTA-A---G-ATTACA--AATG-TAA-T-TG-AA----TTAT--G-A------CATGG-AATTTAAAGAT-------------------------CAACGG----TTAGAATTA------AGA-A--ATACAAGGAG-GAT-GCATG-GAGT--------GGAA-GAATG--TCATG-AAGCAAA--GTAGCATTTAGAA-TAAA--AGTTAGCATT-AAGAgatcaaaggttagaattaa
gi|7 : GTAAGTAA-TGCG-AACATTAATG-ACT-AGTACGAATGTGCAAAAG--CATTAATAAGTGA-------------TTTATCGATGAAA--G------CGAA-----A-GATGATACGAT----------------------AA-T----GACGTATCTAGAGATAGAAATATTAGA---G-ATTACAGAAATG-TATACATG-AATATCTTAT--GTATAA------GG-AATT-AAAGAT----CAT------AT--G-TC-------CGG----TTAGAATTAAAAGTCAT------TACAAGCATTGATAGCATG-ATGC--------A-AA-GAATGGTTCATG-AACAAAATAAGAA-ATT-AGAA-TAAA--GATAAGCAT----AAATACAAAGCA--G-AG-G-ATG--CAC--AAATAAA----A--AATA---GAAAT--ATCTTTGCAAATA-CAAACACATGTGT-AACA--TTG-AA-TTAAA--------G-AAAG-TC--------TAT-AAG------AA--AAGATAGAGCCCAT-GGAGAAATAGTTT-AA-CAT-ACA--CA-AGTAAAATGGTAATTGAAAAATATCAAACA---ACTAAAAA-ATAC-A-A--TTA-AATT-----AGAAT-ACAGAGAAGAATTC-ATGAATTTATGGAGTCGGTAATCAACCATATCC
gi|15 : A----------A-------------TTTAC--ATGAAAA-T------CGAA-----A-GTAGAG-CGAT---------------------AAA-T----GACGAAGT--AAAATTGAA-T-TCA-A---G-ATTACA--------------------TGTTAT--G-ATAT-AACATGG-AATTTAAAAAT--GTCAT------ATC-G-AAAAT-CAAAGA----TTAGAA---------ATA-AGAATACAAGGAA-GAT-GCATG-GAAG--------G-AA-GAATG--CCATG-AAGCAA--------------AA-TATA--AATTAGAATT-AAGAATACAA---G--A-AG-G-ATGCA-AA--GAATatcacatcgcagctaaacgcattttgttaccctaatattatata
gi|10 : ataatgccacacaaaattcatacgcaaaccgcacataaatt----------A-------------TTTAC--ATGAAAA-C------G-AA-----A-GTAGAT-CGAA---------------------TAAAT----GACGAAGC--AAAATACAA-T-TTA-A---GCATTACA--AATG-TAAAT-TG-AA-A----GT--G-TTAATGACATGG-AATTT---GATCCGTCA---------------------ACGG----TTA-AATTA----------G--ATACAAGGAG-G-T-GCATG-GAAT--------G-AA-GAAT---TCATG-AAGCAAA--ATAGAATTTAGAAATAAA--AGTTAGCATT-AAGAATACAA---G--G-AG-G-ATGCATAG--AAAT----------TG-A---AAACC--G-------AAATG-CA---ACAT-TGT-AACA--TGG-AA-TT-AA--------GCGATG-TCAAA-----TATAAGA------AA--A--TTAG-A---AT-GGATA------TTAAA-AATGACA--CAAGGTAAC-TGA-ATTT--AAAATGTCAT-AA---AGT--AAATATA-AA-G--TTAGAATT----AAGAAT-A-A-GGAAGGATGCTATGGAATTATGG---CGGTGATT--tatggcggtgattcccttccataattgt
gi|17 : ataggT--G-ATGT-AACATGG-AATT-AAAG-T--ATAAG-----TTGA-G-AGAAT-CAAAAG----TTAGAATTA------A-G-A--ATACAAGGAG-GAT-GCATG-GAAT--------G-AA-GAATG--TCATG-TAGCAAA--ATAACATTT-----TAA--------------AAGAACACA---------AG-G-ATACATAA--AAAC-----------A-G---AAAACT-G-------ATATG-CA---ATAT-TGT-AACA--TGG-AA-TT-AA--------G-AATG-TC--A-----TGT-AGG------A
gi|11 : -----TATA-G-TAATTCTAATCAAACTTTAGAATTA------A-G-A--ATACAAGGAG-GAT-ACATA-AAATTTAACATAG-AATGAGTG--TCATG-TAGCAAA--ATAGCATTTAGAA-T--------TAGCCT---ACAA--CAA---G--G-AT-G-ATGCATAT--ACATGAACTGCA--TG-A---AATAC-----------AATA-CAT--GTAT-TGT-ACCCGTTGG-AA-TT-AA--------G-GATG-TC--A-----TAT-AGGCCTAGCAA--A--TTATGA---AT-GGAAA------TTCAA-AATGACA--CTAGGTAACATGGAATTA--AAAATGTCATAAA----GT--AAA-ATACAA-A--TT-----T----A----T-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATT--CCCT-TCC
gi|12 : caAGAT-CAAAGG----TTAGAATTA--------A-GT-ATATAA-------T-GCATG-GAAT--------G-AC-GAATG--TCATG-AAGCAAA--ATTTCGTTTAGAA-TAAA--AGTTAGCATT-AAGAATACAA---G--G-TG-A-ATGCATAA--AAAT-----------A-G---AAAACG-G-------AAAGG-CA---ATAT-TGT-ATCA--TGG-AA-TT-AAGGATCATTG-GATG-CC--A-----TGT-AGG------AA--A--TTAAGA---AT-GGATA------TT-GA-AATGACA--CAAGGTAACATGGAATTT--AAAATGTTAT-GA---AGT--AAA-ATATAA-A--TTAGATTT----AAGAAT-AC----AAGGATGA-ATGGAATTATGG---CGGTGATT--CCCT-TCCat
gi|30 : tttaaATAG----TTAGAATTT----TAAGAGA--ATACAAGAAG-GAT-GCATA-GAAT--------atag
gi|15 : gtA-TAAATTAATTTACATG-AAAATCGAAA---GTAG-AGCG-ATAAATGACGAAGTAAA----ATTGA-ATTCAAGAT--T-------ACATG-TT---ATGA-TAT-AACA--TGG-AA-TTTAA--------A-AATG-TC--A-----TAT-CGA------AA--A--TCAAAG---ATTAGAAA------TA-AG-AAT-ACAAGGAAGATG-CATGGAAGGA--AGAATGCCATGAA----GC--AAA-ATATAA-A--TTAGAATT----AAGAAT-ACA-AGAAGGATGC-AAAGAATTATGG---CGGTGATT--CCCT-TCCtatggcggtgactcccttccat
gi|40 : ataatgccacacaaaattcatacgcaaaccgcacC--A-------AAATG-CA---ACAT-TGT-AACA--TGG-AA-TT-AA--------G-Gataattgt
gi|13 : --G-------AAATG-TT---ATGA-TAT-AACA--TGG-AATTT-GA--------A-GATG-TC--A-----TAT-AGT------AA--A--
gi|17 : gcttgtcagcaaaaattcatccgggttttttgaaagggagcattcgttgtggcatatagtgcgccctctggtgcaataatgaggcattaaatgataaaagccctctggtgtaacgatgtgacattaaaaataatgcaacaaagcataataaaattgacagtagatcgatacttactgacgaagcaaaatataatttaagatgaagcaaaatataatttaagattacaaatattaattGTAACATG-GAATT--AAA--GT-ATAAGTTGAG---AGA-AT-CAA-AAGTTAGAATT----AAGAAT-ACA-AGGAGGATGC-ATGGAATgcaaatgttag
gi|14 : tgatAAA---ACT--GAA-AC-CAA-AG-TTAGAATT----AAGAAT-ACC-TGAAGGGTGC-ATAGAATTATGG---CAGTATTT--CGAT-TCCgaagaatgtcatgtagcaaaataacattttaaaagaacacaaggatacataaaaacagaaaactgatatgcaatattgtaacatggaattaagaatgtcatgtagga
gi|30 : gcgaacgcaatgccctctggcgtaataatgaaacatgaaatgataaatgcaatgacaggattaacaagaaagatgaaacgggaactgtagatggaatctataaaattggatgttgaattgcacggtcgtaaattagaattttaaatgtaacgaatgcgaaaatacaatgaggtgagaaggaatattgtaagaatgaaacaaaatgaaagcaaaaggA-G--TTAGAATTTTAAGAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGACT--CCCT-TCCat
5 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|20 ): GGTGAGGGTGGGGTATCTATACTTTTTGGGATAACGTTCACTGTTTCTTTTTTTAAACCATTTAAAAGTTAGTATTTTCGCATGCAAGTAAGATATTGG
Unaligned ( gi|33 ): TTTAATCACAATTACGTGAATAATTATTCAATGACTTTCGAAAGGGTGAGATA
Unaligned ( gi|34 ): CTTATTAGCAAAAGTATTTATTGCATACAATGATACTTATATA
Unaligned ( gi|36 ): CTTATTAGCAAAGTATTATTGCATACAATGATACTTATATA
Unaligned ( gi|39 ): AATTATGGCGGTAATTCCCTTCCATAGTAATA
Alignments
lowQualScore : 222222222222222 11 2222222222222 6666666666666666666666666666666666666666 222 222222 1111111 222 11 11 1 1 1 1 1 22222222 444444 7777777777777777 11 111 1111 6666666 111 1 222 22222222222 1 111 11 3333 1111 22222 3333333333 222 1111 555555 1 9999999999999999999999 1111 111 111 22222222 66666666666666666666 11 1111 11111111 111 7777777777777777777777777777777 111111111 11111 3333333333333333333333333333333 333333333333333333333 33333333 11111111 11111111 444444444 2222222222 111 11111111 22222222 111111 111111 1 11
lowQualScore : 8 3 8 0 666666666666666 66666 3 11 1 6666666666666 8 7777777777777777777777777777777777777777 99 222 99 6 6 2 2 333333 4 6 77 99 2222222 3 99 6 444 11 8 33 1 0 0 0 0 0 66666666 0 6 6 3 3 6 3 444444 7 1 3333333333333333 2 99 7 6 22 6 44 9 7 6 3 6 2 222 2 9999 3 99 0000000 333 7 3 6666 3 777 3 3 8888888 77777 3 3 00000000000 66 9999 2 5 000 1 00 0 22 1111 8 5 2222 77 4 33333 77 9999999999 5 8 0 1 000 4444 6 222222 3 7 5 1 2222222222222222222222 1 8 2 1 3 6666 666 6 222 6 99999999 22222222222222222222 4 1 55 8 222 66 5 5 5555 888 88888888 3 3 3 3 3 000 3 3 44 44 5555555555555555555555555555555 44 3 444444444 00000 6 3 888 5 6 44 88 1 3 3 1111111111111111111111111111111 0 44 3 3 3 444 44 1 3 2 3 22 444444444444444444444 1 0 2 66666666 3 3 6 3 44444444 44 3 44 555 33 555 33 11111111 3 0 33 555 3 3 111111111 777 5555555555 3 000 3 3 55 3 3 33333333 3 4 11111111 4 111111 99999 3 777 0 222222 8 8 1 1 2 66 4 8 99 4 1 44 8888 4 4 0 4 1 777 1
lowQualScore : . . . . ............... ..... . .. . ............. . ........................................ .. ... .. . . . . ...... . . .. .. ....... . .. . ... .. . .. . . . . . . ........ . . . . . . . ...... . . ................ . .. . . .. . .. . . . . . . ... . .... . .. ....... ... . . .... . ... . . ....... ..... . . ........... .. .... . . ... . .. . .. .... . . .... .. . ..... .. .......... . . . . ... .... . ...... . . . . ...................... . . . . . .... ... . ... . ........ .................... . . .. . ... .. . . .... ... ........ . . . . . ... . . .. .. ............................... .. . ......... ..... . . ... . . .. .. . . . ............................... . .. . . . ... .. . . . . .. ..................... . . . ........ . . . . ........ .. . .. ... .. ... .. ........ . . .. ... . . ......... ... .......... . ... . . .. . . ........ . . ........ . ...... ..... . ... . ...... . . . . . .. . . .. . . .. .... . . . . . ... .
lowQualScore : 8 2 0 8 444444444444444 88888 8 22 0 4444444444444 0 4444444444444444444444444444444444444444 22 333 22 7 7 2 5 333333 0 7 33 22 3333333 3 22 7 888 00 0 88 0 0 0 0 0 0 22222222 8 7 7 3 3 7 0 000000 3 5 0000000000000000 5 22 3 7 55 7 55 3 3 7 0 7 5 888 2 5555 2 22 7777777 777 3 3 5555 1 999 3 3 1111111 77777 3 1 66666666666 88 7777 5 5 222 0 22 2 88 5555 0 7 1111 99 0 66666 55 8888888888 0 0 7 0 888 2222 7 555555 3 5 7 7 1111111111111111111111 0 3 1 0 0 0000 555 7 777 7 33333333 11111111111111111111 3 0 77 9 111 99 0 0 6666 888 66666666 6 3 3 3 3 444 3 3 66 66 3333333333333333333333333333333 22 1 999999999 88888 2 1 555 1 2 22 55 7 1 1 2222222222222222222222222222222 3 22 1 1 1 888 22 5 1 1 3 00 444444444444444444444 0 1 9 77777777 1 8 2 1 22222222 22 1 22 444 22 444 88 22222222 1 7 55 888 3 3 888888888 000 8888888888 6 000 6 6 00 6 6 22222222 6 0 44444444 0 555555 00000 7 888 9 888888 9 9 1 1 7 11 4 2 44 4 9 44 5555 0 0 8 0 4 888 0
consensus : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAATG--ATTGGATAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-A----TATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAA----AA-CCA-CGC-CCCCTTCTCC-TA---TC--G-----ACGACGA-TAGG-AGA----------GGGGGGGGG--CTGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTT-GGG-CGCCCCCCCCCCCCATTNA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT-TGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC-T-T--A---------------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAG--CATATAGTGCG-CCCTCTGGTGT-AAT----A---ATG---A----GGCACTAAATGATAAACG-CCCTCTGGTGTAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAATAGAA-T-TTA-A---G-A----------------------TTACA--AATG-TAAAT-TG-AA-A-TGTTAT--GAT-ATAACATGG-AATTTAAAGATGTCAT-----TATA-G-TAA-----ATCAANGGTTAG-AATTA--A-A---AATACAAGGAG-GAT-GCATG-GAAT--------G--AA-GAATG--TCA---TGAAG-CAAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATT-AAGAATACAA---GG-AGG-ATGCATAAAAAT--AAA----AGA---AAAC--G-------AAATG-CA---ACAT-TGT-AACA--TGG-AATT-AA--------G-GATG-TC--A-----TGT-AGG------AA--A--TTAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGTA-AAA-ATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
Reference ( family-520 ) : ATTCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAATG--ATCGGATAAG--AGAA-TACCACGATTG-----AAAAAATACTCACTTCTATT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TNAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGNATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCG-T-AGTTCATTTC-AATGAA-TNTCAANTATT-ATCTAAGTCAC-ACTCGGCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGACCGTATTTG-ATAGGAATCGCTGTGTTAGGCATG--TGCCCACA-TTGATATATCTC--ATTTCCTACATGTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAA----AA-CCANCGC-CCCCTTCTCC-TA---TC--G-----ACGACGA-TAGG-AGA----------GGGGGGGGG--CTGGTTTTAATCAGACTG-TTTGTATTTTTATGAAAGTTT-GNG-CGCCCCCCCCCCCCATTT---TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCC--------CATTTTTTAGCCCAGTT-ACGCCACTGTCCGGGCATGNAAATTG---GTGGAGGGGTA-TTATCCCCACTTT-TGGGGGGGGGG-TAATC-TTCNCTGTTCTTTT-GTAAATAC----------------------ATGNAAAGTTGGGTNTTTTT--TATTAT--AAGGAA-AGTAA--GAT-GTCC---T--GGTGA---------TC---------AGCAAAACATTNATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAG--CATATAGTGCG-CCCTCTGGTGT-AAT----A---ATG---A----GGCATTAAATGATAAACG-CCCTCTGGTGTAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAATAGAA-T-TTA-A---G-A----------------------TTACA--AATG-TAAAT-TG-AA-A-TGTTAT--GAT-ANAACATGG-AATTTAAAGATGTCAT-----TATA-G-TAA-----ATCAANGGTTAG-AATTA-TA-A---AATACAAGGAG-GAT-GCATG-GAAT--------G--AA-GAATG--TCA---TGAAG-CAAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATT-AAGAATACAA---GG-AGG-ATGCATAAAAAT--AAA----AAA---AAAC--G-------AAATG-CA---ATAT-TGT-AACA--TGG-AATT-AA--------G-GATG-TC--A-----TGT-AGG------AA--A--TTAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT--AAA-ATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCNTTCC
gi|1 : ATCCAG-ACGAGCGTATGACGAAAGGAGGGGGGGGGGGGGGTGAGGCATATGGCCCCTTACAGATTTGA--GAAGAAAGGAATGGGACAAAGGATATATGGGATCTGTG----------ATCATTT--A-CATATGA-----------AAATG--ATT--ATAAG--AGAAATATCATTATTG-----AAAAAATGCTCACTCCTTTTTATGCAGGTTCT-AGCTGT--CAAAA---CGT-TGAAATCATATTATCTCTGTA-TCC--ATGCTCAGTATATTTAATTACCGACTTAATTTTAGCTATTTTTCTGGTGAATCCTTACAATTCCTGCTTGTTCCACGCAATCTAACAACGGTGGTAAATGAAAGTTTTAATAATAATCAATGAGTTCATTTCCAATGAAATTTCAAATATTCATCGAAGTCACTGCTC---TCCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCTTGATTCGAACAATCGGGCAATCT-AACAAA-GAGTTTCCTGGACTATTAGACCTC--GGATATAGGATGACTGCCCGTATTTGGATAGGAATCGCTCTGTTAAGCATGGTTACCCACAATTGATATATCTCTAATTTC-------TAT-TCCTATT--GCTTTGT-AATTCATTCTGATTAA----AAACCACCAC-CCCCTTCTCAATA---T---G-----ACGACGAACAGGGAGA----------GGGGGGGGGGCCTGTTTTAAATCAGATTAATTTGTATTTTTATTAA-GTTT-GGGGCGCCCCCCCCCCCCATTAAAATTTAAGCTCAAGCTT-T----GTGAAAGTTTTGGTGTCACCTTAAC-TCTTTTTTAGTCCAGCTTTAATGAAAGTTTGTGTCCCCTATCGACTTCATTTTTTAGGTCAGTTTACATCACTGTCCAGGCATGGGAATTGTTTGTGGTGGGGTAATTATTCCAACTTT-GGGGGGGGGGGGTAATC-TTC-CTGTTCTTTT-GTAAATAC----------------------ATGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGAT--------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAAAATATAGTGCATCCCTCTGATGTAAAT----A---ATGA--A----GGCACT-AATGATAAACGCCCCTCTGGTGTAA-TAATTGTGAA-CATTAA---A-TAA--ACGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GC-GAT-CGA---TTAA-TAACGAA--GCAAAAAATAGAA-T-TTA-AAAGA-A----------------------TTAC---AATGCTAAAT-TGAAA-A-CGTTGTTGGAT-AAAACATGGAAATTTAAAGATGTCAT-----TATATGTTAA-----ATTAATGGTTAG-AATTATTATA---AAT-CAAGGAG-GGTGGCATGAAAAT--------G--AA-GAATG--CCG---TGAAATTAAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAAAGAATACAA---GGAAGG-ATGGATAAAAATA-AAA----AAA---AAAC--G-------AAATGCCA---ACAT-TGTAAACA--TGGAAATT-AA--------G-GATGTTC--A-----TGT-AGA------AAATA--TTAGAA---ATG--GA------TT-GA-AATGACAGACGGTAACATGAGATTT--AATC-TGTCATAAAAGTA-AAA-ATACAATATTAGAATT----AAGAATAACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|10 : aa----------A-------------TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGAA--TAAA-TGACGAA--GC--AAAATACAA-T-TTA-A---GCA----------------------TTACA--AATG-TAAAT-TG-AA-AGTGTTA-------ATGACATGG-AATTT---GAT-CCGT----------------------CAACGGTTA--AATTA--------GATACAAGGAG-G-T-GCATG-GAAT--------G--AA-GAAT---TCA---TGAAG-CAAAAT---A-GAAT--------TTAGAAATAAAAGTTAGCATT-AAGAATACAA---GG-AGG-ATGCATAGAAAT----T----GAA---AACC--G-------AAATG-CA---ACAT-TGT-AACA--TGG-AATT-AA--------GCGATG-TCAAA-----TATAAGA------AA--A--TTA-GA---ATGGATA------TTAAA-AATGACACAAGGTAAC-T-GAATTT--AAAA-TGTCAT-AAAGT--AAATATA-AA-GTTAGAATT----AAGAAT-A-A-GGAAGGATGCTATGGAATTATGG---CGGTGATTt
gi|11 : atagg-----TATA-G-TAATTCTAATCAAACTTTAG-AATTA--A-G---AATACAAGGAG-GAT-ACATA-AAATTTAACATAG--AATGAGTG--TCA---TGTAG-CAAAAT---A-GCAT--------TTAG-AA------TTAGCCT---ACA--ACAA---GG-ATG-ATGCATATACAT--GAACTGCATG---AAAT--A-------CAATA-CAT--GTAT-TGT-ACCCGTTGG-AATT-AA--------G-GATG-TC--A-----TAT-AGGCCTAGCAA--A--TTATGA---ATGGAAA------TTCAA-AATGACACTAGGTAACATGGAATTA--AAAA-TGTCAT-AAAGT--AAA-ATACAA-ATT----T---------AT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|12 : caAG-----ATCAAAGGTTAG-AATTA--A-G---TATATAA-------T-GCATG-GAAT--------G--AC-GAATG--TCA---TGAAG-CAAAAT---T-TCGT--------TTAG-AATAAAAGTTAGCATT-AAGAATACAA---GG-TGA-ATGCATAAAAAT---------AGA---AAACG-G-------AAAGG-CA---ATAT-TGT-ATCA--TGG-AATT-AAGGATCATTG-GATG-CC--A-----TGT-AGG------AA--A--TTAAGA---ATGGATA------TT-GA-AATGACACAAGGTAACATGGAATTT--AAAA-TGTTAT-GAAGT--AAA-ATATAA-ATTAGATTT----AAGAAT-AC----AAGGATGA-ATGGAATTATGG---CGGTGATTCCCTTCCat
gi|13 : tttaa---------TC---------AGCAAAA-ATTCATCCGGG--TTTTTTGAAAGGGAGCATTCGTTGTGG--CATATAGTGCG-CCCTCTGGTGC-AAT----A---ATG---A----GGCATTAAATGATAAAAG-CCCTCTGGTGTAA-CGA-TGTG-A-CATTAA---A---A--AT-AATG--CAA-----CA----------A-------------AGCAT--AAT-AAAAT------T-GAC----A-GTAGAT-CGATACTTAC-TGACGAA--GC--AAAATATAA-T-TTA-A---G-ATGAAGCAAAATATAATTTAAGATTACA--AATA-TTAAT-TG-AA-A-TGTTAT--GAT-ATAACATGG-AATTTGAAGATGTCA------TATA-G-TAA-----AGCAAATGTTAG-atag
gi|14 : gcttgAATG-CCCTCTGGCGTAA-TAA-TGAA-A-CATGAA---A-T-G--ATAAATG--CAA--------------------------------TGAC--AGG-ATTAA------C-AA-----G-AAAGAT--GA-----AA-CGG-GAACTGT--AGA-TGGAA-T-CTA-------------------------------TAAA--ATTG-GATGT-TG-AA-T-TGC-AC--GGTCGTAAATTAG-AATTTTAA-ATGT--------------------------AACG------AATGC-GA-A---AATACAATGAG-G-T-G---A-GAAG--------G--AA-TATTG--TAAGAATGAAA-CAAAATGAAA-GCAAAAGGAAAACTGA-AACCAAAGTTAGAATT-AAGAATACCT---GA-AGG-GTGCATAGAATT--A
gi|15 : gcgaacgcA----------A-------------TTTAC--ATG-AAAAT------CGAA-----A-GTAGAG-CGA---TAAA-TGACGAA--GT--AAAATTGAA-T-TCA-A---G-A----------------------TTACA---------------------TGTTAT--GAT-ATAACATGG-AATTTAAAAATGTCAT------ATC-G-AAA-----ATCAAAGATTAG-AA--A-TA-AG--AATACAAGGAA-GAT-GCATG-GAAG--------G--AA-GAATG--CCA---TGAAG-CAAAAT---A--------------------TAAA--TTAGAATT-AAGAATACAA---GA-AGG-ATGCA-AAGAAT--tggcagtatttcgattccat
gi|16 : ataatgccacacaaaattcatacgcaaaccgcacataaatt-CCCT-TGTTGTAA-TAA-TGTG-A-CATTAACGAA-T-A---CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGA---TAAA-TGACGAA--GC--AAATAAGAA-T-TTA-A---G-A----------------------TTACA--AATG-T-AAT-TG-AA-----TTAT--G------ACATGG-AATTTAAAG---------------------------ATCAACGGTTAG-AATTA-AG-A---AATACAAGGAG-GAT-GCATG-GAGTG-------G--AA-GAATG--TCA---TGAAG-CAAAGT---A-GCAT--------TTAG-AATAAAAGTTAGCATT-AAGAtatggcggtgattcccttccataattgt
gi|17 : T--GAT-GTAACATGG-AATT-AAAG-TATAAG-----TTGA-G-AGA-----ATCAAAAGTTAG-AATTA--A-G---AATACAAGGAG-GAT-GCATG-GAAT--------G--AA-GAATG--TCA---TGTAG-CAAAAT---A-ACAT--------TT-----TAA------------AAGAACACA-------AGG-ATACATAAAAAC---------AGA---AAACT-G-------ATATG-CA---ATAT-TGT-AACA--TGG-AATT-AA--------G-AATG-TC--A-----TGT-AGG------A
gi|18 : CG-CCCTCTGGTATAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAATGAAGCATAATAGG---A-------------TTTAC--ATG-AAAAC------G-AA-----A-ATAGTT-CGA---TAAA-TGACAAA--GC--AAGATAGAA-T-TTA-A---G-A----------------------TT--A--AATG--GAAT-TT-AA-A-
gi|19 : aggcagacttatgaattcataggggATTTTTATGAAAGTTTTGAG-ACACCCTCCTCACTATTT---TTTCAGCCCA-GCTTAT----ATAAAAGTTT--GTG-TCCCTCA-C----TTTTTAGCCCAGCTTTA-gatcaaaggttagaattaa
gi|2 : gctgtgcaATCCAGGACGAGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----TC----ATTT-----A-CATATGA-------------ATG--ATT--ATAAG--AGAA-TATCATTATTG-----AAAAAATGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC---T--GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTATT--GCTTTGT-AATTCATTCTGATTAA----AA-CCACCAC-CCCCTTCTCA-TA---T---G-----ACGACGA-CAGG-AGA----------GGGGGGGGG--CTGGTTTTAATCAGATTA-TTTGTATTTTTATTAA-GTTT-GGG-CGCCCCCCCCCCCCATTAA--TTTAAGCTCA-GCTT-T----GTGAAAGTTT--GTGTCACCTTA-C-T-TTTTTTAGTCCAGCTTTA-TGAAAGTTTGTGTCCCCT--------C-TTTTTTAGGTCAGTT-ACATCACTGTCCAGGCATGGGAATTGTT-GTGGTGGGGTA-TTATCTCCACTTT-GGGGGGGGGGG-TAATC-TTCGCTGTTCTTTT-GTAAATAC----------------------ATGCAACATTGGGTTTTTTT--T-TTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAG--AATATAGTGCA-CCCTCTGATGT-AAT----A---ATG---A----GGCACTAAATGATAAACG-CCCTCTGGTGTAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAATAGAA-T-TTA-A---G-A----------------------TTACA--AATG-TAAAT-TG-AA-A-CGTTGT--GAT-AAAACATGG-AATTTAAAGATGTCAT-----TATA-G-TAA-----ATTAATGGTTAG-AATTATTATA---AATACAAGGAG-GGT-GCATG-AAAT--------G--AA-GAATG--CCG---TGAAT-TAAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATT-AAGAATACAA---GG-AGG-ATGGATAAAAATAAAAA----AAA---AAAC--G-------AAATG-CA---ACAT-TGT-AACA--TGG-AATT-AA--------G-GATG-TC--A-----TGT-AGG------AA--A--TTAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCATAAAAGT--AAA-ATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCCgctccactgcctcaat
gi|21 : TTGTAA--CATATAGTGTG-CCCTCTGGTGT-AAT----A---ATG---A------CATTAAATGACAAACG-CCCTCTGGTGTA---GA-TGTG-G-CATTAA---A-T-A--ACAATTG--CAA-----CA----------A-------------
gi|22 : ACTGTCCAGGCATGGAAATTG---GTGGAGGGGT---TATCCCTACTTT-TGGAGGGT----TAACG-TTCAATGTTCTTTT-GTAAATAC----------------------ATGTAAAATTGGaac
gi|23 : GTCTGATTAA----AA-CCA--GC-CCCCTTCTCC-TA---TC--GTCATGACGACGA-TAAG-AGAAAAAAAAAAGGGGGGGGGG--CTGGTTTTAATC
gi|24 : AATCTGATTTACCCCAC-TCATCCCACCCCTTTGTC-TA---TTCTG-----ACGACGA-TAG---GA----------GGAGAAGGG--CTGGTCTCCATCAAACTc
gi|25 : CAGTCTGATTAA----AA-CCAAC-C-TACCTTCTCC-TA---TC--G-----ACGGCGA-TAGG-AGA------------AGGAGGT--TTGGTTTTAATCAGACTG-tc
gi|26 : acAGTCTGATTAA----AA-CCA--GC-CCCTTTCTCC-TA---TC--G-----TCGTCAA-GAAA-AGG----------GGGGGGGGGA-CTGGTTTTAATCAGACTG-
gi|27 : CAGTCTGATTAA----AA-CAA--GT-CCCCTTCCCC-TA---TC--G-----ACGACGA-T----AGA----------TGGGGAGGG--GTG--TGTGATCAAACTG-
gi|28 : aCTGATTAA----AA-CCA--GC-CCCCTTCTCC-TATCGTC--G-----ACGACGA-TAGG-AGA------------AGGGGGA--CTGGTTTTAATCAGACg
gi|29 : CAGTCTGATTAA----AA-CCAGC-C-CCCCTTCTCC-TA---TC--G-----TCGACAA-TAGG-AGA------------AGGGGGG--CTGGTTTTAGT
gi|3 : ATTCAGCACGGGCGTATAAC------AGGGGGGGGGGGGG---------AT---------C---TTTGGAAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTGCCCCTCC--CACTTTTT--AACACATAATTTCTTTT--AAAATG--ATCGGATAAG--A--A-TGCCACGATT-------AAAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAAATGTAT-TTAA--CATATT-TCACTGAA-TCCATATNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN-NNNNNNN-NNNNN-NNNNNNNN-NNNNNNNNNNNN-NNN-N-NNTTCA------ATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GAC-AAC--AATGACGTCT--ATTCGAACTA-CATGTA-TC-------AAGAGTCTC-TGGAATAAAGGACCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTAATATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATT
gi|3 : aaattattcaatgactttcgaaacgggtgagataaTT-T----ATGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA-TGAAAGTTTGTGCCCCCC--------CTTGTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAATTA---GCGGAGGG-TA-TTATCCTCACTTT-TTGGGGT-----TAACA-TTCTCTGTTCTTTT-TAAAATACCTTTTCAC--------------ATGGAAAGTAAGATATATGT--GACTAT----GGAA-GGGAATTGCC-GCCC---TCTGGTGA---------TCGAATTTGTCAGCAAACAATTCATCCGGGTTATTTT--AAAGGGAGAATTCATTGTAG--CATGTAGTGCG-CCCTCTGGTGT-AATTAATACGTATG---T----GACATTAAATAATGAACG-CCCTCTGGTGTAA-TAA-TGAG-A-TATGGA---A-T-G--ACGAATG--CAA-----CA----------AAGCATAATAGTA-TTTAC--ATA-AAAAA------C-AATTCAAATGTAGAT-CGA---TGAAATGACGCA--TC--GAAAT---------------G-A--------------------------A--AATG-TAAAT-TG-AA-A-TGTTAT--GAT-ATAACATGG-GATTTAAAGACGGCATATACATGTA-G-TAA-----ATCAAAGTTTAG-AATTA--A-A---AATACAAGAAG-GAT-GCATG-GAAT--------G--AA-GAATG--TCA---TGAAG-CAAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATT-AAGAATATAA---GG-AGG-ATGCATAAAAAT---------AGA---AAACT-T-------AAATT-CA---ATAT-TGT-AACA--TGG-ATTT-AA--------G-GATG-TC--ATGTACTGT-AGC------AA--T--TTAAGA---ATGGAAA------TT-GATATTGACACAAGGAAGAAT----TTT--AAAATTGTCATAACAGTA-AAA-ATACAG---TAGAATT----AAGAAT-AAC-AGA---ATGC-ATAtttatgaaaggttgtgccctcctacatttttttatcccagctttatgaaagtttgtgcccccccttgttttagcccagctatgccactgtccggacatgtaaattagcggagggtattatcctcactttttggggttaacattctctgttctttttaaaataccttttcacatggaaagtaagatatatgtgactatggaagggaattgccgccctctggtgatcgaatttgtcagcaaacaattcatccgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgtgacattaaataatgaacgccctctggtgtaataatgagatatggaatgacgaatgcaacaaagcataatagtatttacataaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatataaggaggatgcataaaaatagaaaacttaaattcaatattgtaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaaggaagaattttaaaattgtcataacagtaaaaatacagtagaattaagaataacagaatgcata
gi|30 : aaattattcaatgactttcgaaacgggtgagataaattcagcacgggcgtataacagggggggggggggatctttggaagaaggggcacgtgcaagtgagtttgtgcccctcccactttttaacacataatttcttttaaaatgatcggataagaatgccacgattaaaaatactcatttctaatatgctggttatcagctgtcaaaaatgtatttaacatatttcactgaatccatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgacaacaatgacgtctattcgaactacatgtatcaagagtctctggaataaaggacctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttaatatctttcattttctacatgtatctcttgttttgcttgtcaattA-GTTAGAATTTTAAGAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGACTCCCTTCC
gi|31 : gtatCAGTCTGATTGA----A--CCATC--------TCACC-T--------G-----ACGACGA-TGAG-TGA----------AGGAGGGG---CTCGTTTTAATCAGACTat
gi|32 : AGTCTGATTAA----AA-CCAGC--------------------T--G-----ACGACGA-TAGG-AGA----------AGGGGG-----CTTGTTTTAATCAGACT
gi|35 : --G-----ACGACGA-TAGG-AGA----------AGGGG--GG--CTGGTTTTAATCAGAC
gi|37 : AGTCCGATTAA----AA-CCAA-GC-CCTCTTCTCC-TA---TC--G-----CCGactg
gi|38 : -AGG----------GGGGGGGGG--TTGGTTTTAACCAGAC
gi|39 : aaaaaaaAATTATGG---CGGTAATTCCCTTCC
gi|4 : ATTCAGCACGGGCGTATAACAGA-GG-GGGGTGGGGGGGA-T--------------CTT------TGGAGAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTG----CCCTCCACTTTTTTAA-CACATAATTT--TTTTAAAAATG--ATCGGATAAG--A--A-TGCCACGATT--------AAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAA---TGTATTAA--CATATT-TCatagtaata
gi|4 : aTTC-AATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GA--ACAACAATGACGT-T--ATTCGAACTA-CATGTA-TTC------AAGAGTCTC-TGGAGTA-AAGGCCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTACTATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|4 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGCCCA-G----TGGGAACGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA--GAAAGTTTGTGCCCCCC-----------TTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAAT-A---GCGGAGGG-TA-TTATCCTCACTTT-TGGGGT------TAATCATTCTCTGT-CTTTT-A-AAATACCTTTTCAC--------------ATGGAA-GTAAGATATATGT--GACTATGGAAGGGA-ATTG-----T-GCCCCTCT--GGTGA---------TCGAATTTGTCAGCACACAATTCATC-GGGTTATTTT--AAAGGGAGAATTCATTGTAG--CATGTAGTGCG-CCCTCTGGTGT-AATT---A---ATACGTATGTTGACATTAAATAATGAAC--CCCTCTGGTGTAA-TAA-TGAG-A-TAG-GG---A-T-G--ACGAATG--CAA-----CA----------AAAGCTAATTAGTATTTAC--ATA-AAAAAACAATTC-AA-----ATGTAGAT-CGA---TGAAATGACGCA--TC--GAAAT---------------G-A--------------------------A--AATG-TAAAT-TG-AA-A-TGTTAT--GAT-ATAACATGG-GATTTAAAGACGGCATATACATGTA-G-TAA-----ATCAAAGTTTAGAAATTA--A-A---AATACAAGAAG-GAT-GCATG-GAAT--------G--AA-GAATG--TCA---TGAAG-CAAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATT-AAGAATATGA---AG-AGGAATGCATAAAAAT---------AGA---AAACTTA-------AAATT-C----ATAT-T-T-AACA--TGG-ATTT-AA--------G-GATG-TC--ATGTACTGT-AGC------AA--T--TTAAGA---ATGGAAA------TT-GATATTGACACAA-GTAACA-GGAATTT--AAAA-TGTCAT-AAAGTA-AAA-ATAC-A-GTTAGAATT----AAGAAT-ACA-AGA---ATGC-ATAtttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|40 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaagggC--A-------AAATG-CA---ACAT-TGT-AACA--TGG-AATT-AA--------G-Gtt
gi|5 : TTTTAATAAT---CG-T-ATTTCATTTA-AAT-----------TATT-ATCTAAGTCAC---T--GCTCCATGACGTGAAATGCCG-AGAATTTTTTTTTAATTA----AGTGACGTCC--ATTCGAACAATCGGGCA-TTTGAACAAAAGAGTCTC-TGGACTATCGGACCTTTGGAATATAGGATGA-TGACCGTATTTG-TTAAGAATTGCTGTGTTAGGCAT----------A-TCG----ATCTC--ATTTTC-A-----ATCTCCTA--TTGCTTTGC-TATTCATTCTTACTAA----AA-ACA
gi|5 : GGGA--CTGGTTTTAATCAGACTG-CA---ATTTTTATGAAAGT---GTG-TGTCCCCCCCCC-----T---TTTATGCCCA-GCTT-T----CTGAAAGTTT--GTGCCCCATCA-----TTTTTTAGGTCAGTTcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaatttttatgaaagtgtgtgtcccccccccttttatgcccagctttctgaaagtttgtgccccatcattttttaggtcagttacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|5 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTT-T----ATGAAAGTGT--GTGTCCCCCCC-C-C-TTTTAT-GCCCAGCTTTC-TGAAAGTTTGTGCCCCAT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCAGGCATGACAATTG---GTCGAGGGG-G-TTATCCCCACTTTATGGGGG------TTATCGTTCACTGTTTTTTTTGTAAATACATGTAAAGTTGGTTATTTTCACATGGAAAGTAAGATGTTGGTGATATTAT----GGAAGAGAAT--CATCGCCC---T--AGTGACTGAATTTGTC---------AGCAAAACATTAATCCGGG--TTTTTTGAAAGGGCGCATTCATTGTAG--CATATAGTGCG-CCCTCTGGTGT-AAT----A---ATG---A----GGCACTAAATGATAAGCG-CCCTCTGGTATAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAA------CGAA-----A-GTAGAT-TGA---TAAA-TGACGAA--GC--AAAATAG---------------------------------------------AATG-TAAAT-TG-AA-A-TGTTAT--GAT-ATAacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|6 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaattCTTTT-GTAAATAC----------------------ATGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAG--AATATAGTGCA-CCCTCTGATGT-AAT----A---ATG---A----GGCACTAAATGATAAACG-CCCTCTGGTGTAA-TAA-TGTG-A-CATTAA---A-T-A--ACGAATG--CAA-----CA----------A-------------TCTAC--ATGAAAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAATAGAA-T-TTA-A---G-A----------------------TTACA--AATG-TAAAT-TG-AA-A-CGTTGT--GAT-AAAACATGG-AATTTAAAGATGTCAT-----TATA-G-TAA-----ATTAATGGTTAG-AATTATTATA---AATACAAGGAG-GGT-GCATG-AAAT--------G--AA-GAATG--CCG---TGAAT-TAAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATT-AAGAATACAA---GG-AGG-ATGGATAAAAATAAAAA----AAA---AAAC--G-------AAATG-CA---ACAT-TGT-AACA--TGG-AATT-AA--------G-GATG-TC--A-----TGT-AGG------AA--A--TTAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCAT-AAAGT--AAA-ATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|7 : GTAAGTAA-TGCG-AACATTAATG-ACT-AGTACGAATGTGCAAAAG--CATTAATAAGTGA-------------TTTATCGATG-AAAGC------G-AA-----A-GATGATACGA---T-AA-TGACGTA--TCTAGAGATAGAAATATTAGA---G-A----------------------TTACAGAAATG-TATACATG-AATA-TCTTAT--G-T-ATAA---GG-AATT-AAAGAT--CAT------ATG------------TC--CGGTTAG-AATTA-AA-AGTCATTACAAGCATTGATAGCATG---AT--------GCAAA-GAATGGTTCA---TGAA--CAAAAT---AAGAAA--------TTAG-AATAAAGATAAGCAT----AAATACAAAGCAG-AGG-ATGCAC--AAAT--AAA----AAATAGAAAT--ATCTTTGCAAATA-CAAACACATGTGT-AACA--TTG-AATTAAA--------G-AAAG-TC--------TAT-AAG------AA--AAGATAGAGCCCATGGAGAAATAGTTT-AA-CAT-ACACAA-GTAAAATGGTAATTGAAAAA-TATCAAACAACTAAAAA-ATAC-A-ATTA-AATT-----AGAAT-ACAGAGAAGAATTC-ATGAATTTATGGAGTCGGTAAT
gi|8 : CGGGCGTATGACGAA-GGAGGGGGGGGGGGG--TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----------GTCATTT--A-CATATGA-------------ATG--ATT--ATAAG--AGAA-TATCATTATTG-----AAAAA-TGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-AATCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAAT---CA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC---T--GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTA--TTGCTTTGT-AATTcaaccatatccatcacatcgcagctaaacgcattttgttaccctaatattatata
gi|9 : aggc--A-CACA-AATTTCTTTT--ACAATAGAATGGAATCAGTTAGAA-TAA-ACGATGGTTAAAAAAAAATACTCAGTTCTATT--TGTAGGTTCTCAGCAGTTGCAAAA---T------A--CAAATT-TCT-TG----CA--ATGCACACAATCTGTA-TT
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGTGAGGGTGGGGTATCTATACTTTTTGGGATAACGTTCACTGTTTCTTTTTTTAAACCATTTAAAAGTTAGTATTTTCGCATGCAAGTAAGATATTGG
Unaligned ( gi|33 ): TTTAATCACAATTACGTGAATAATTATTCAATGACTTTCGAAAGGGTGAGATA
Unaligned ( gi|34 ): CTTATTAGCAAAAGTATTTATTGCATACAATGATACTTATATA
Unaligned ( gi|36 ): CTTATTAGCAAAGTATTATTGCATACAATGATACTTATATA
Alignments
lowQualScore : 11111111111111111111111111
lowQualScore : 222222222222222 11 2222222222222 6666666666666666666666666666666666666666 11 222222 1111111 222 11 11 1 1 1 1 1 222 444444 7777777777777777 11 111 1111 4444444 111 1 2222222222 22222222222 1 11 2222222222 1111 22222 3333333333 222 1111 11111 222222 1 11111111111111111111111111 1111 111 22222222222222222 66666666666666666666 11 1111 11111111 111 7777777777777777777777777777777 111111111 11111 33333333333333333333333 333333333333333333333 1111 11111111 11111111 444444444 2222222222222 111 11111111 22222222 111111 11111111 1 11
lowQualScore : 8 3 8 0 666666666666666 66666 3 11 1 6666666666666 8 7777777777777777777777777777777777777777 6 77 6 99 6 6 4 2 333333 1 6 77 99 2222222 2 99 6 444 11 8 33 0 0 0 0 0 333 999 0 6 6 3 3 6 1 333333 7 1 3333333333333333 2 99 7 6 22 6 44 9 7 6 1 6 1 222 9999 3 99 6666666 333 7 3 3 9999999999 33 9999999 77777 3 3 00000000000 66 9999 1 5 3 00 9999999999 8 5 2222 77 4 33333 77 9999999999 8 0 1 000 0 8888 77777 555555 3 7 5 1 66666666666666666666666666 1 7 1 1 1 6666 666 6 77777777777777777 22222222222222222222 4 1 55 8 222 66 5 5 5555 888 88888888 3 3 3 6 000 3 44 3 44 5555555555555555555555555555555 44 3 444444444 00000 6 3 888 5 6 44 44 44 1 3 3 33 3 44444444444444444444444 0 44 3 3 777 44 3 3 44 444444444444444444444 1 0 3 3 7777 6666 3 3 3 3 3 11111111 77 3 44 555 0 3 555 33 11111111 3 0 0 3 555 3 3 3 222222222 1111111111111 3 000 3 3 55 3 3 33333333 3 4 11111111 4 111111 66 66 3 777 22222222 8 8 1 1 2 66 4 8 77 1 44 8888 4 4 0 4 1 777 0
lowQualScore : . . . . ............... ..... . .. . ............. . ........................................ . .. . .. . . . . ...... . . .. .. ....... . .. . ... .. . .. . . . . . ... ... . . . . . . . ...... . . ................ . .. . . .. . .. . . . . . . ... .... . .. ....... ... . . . .......... .. ....... ..... . . ........... .. .... . . . .. .......... . . .... .. . ..... .. .......... . . . ... . .... ..... ...... . . . . .......................... . . . . . .... ... . ................. .................... . . .. . ... .. . . .... ... ........ . . . . ... . .. . .. ............................... .. . ......... ..... . . ... . . .. .. .. . . . .. . ....................... . .. . . ... .. . . .. ..................... . . . . .... .... . . . . . ........ .. . .. ... . . ... .. ........ . . . . ... . . . ......... ............. . ... . . .. . . ........ . . ........ . ...... .. .. . ... ........ . . . . . .. . . .. . .. .... . . . . . ... .
lowQualScore : 8 2 0 8 444444444444444 88888 8 22 0 4444444444444 0 4444444444444444444444444444444444444444 7 55 7 22 7 7 2 5 333333 0 7 33 22 3333333 5 22 7 888 00 0 88 0 0 0 0 0 222 000 8 7 7 7 7 7 0 888888 3 5 0000000000000000 5 22 3 7 55 7 55 3 3 7 0 7 0 888 5555 2 22 7777777 777 3 3 1 0000000000 88 1111111 77777 3 1 66666666666 88 7777 0 5 2 22 0000000000 0 7 1111 99 0 66666 55 8888888888 0 7 0 888 7 2222 55555 888888 3 5 7 7 33333333333333333333333333 0 9 0 0 0 0000 555 7 55555555555555555 11111111111111111111 3 3 77 9 111 99 0 0 6666 888 66666666 6 3 3 7 444 3 66 3 66 3333333333333333333333333333333 22 1 999999999 88888 2 1 555 1 2 22 22 22 7 1 1 44 1 99999999999999999999999 3 22 1 1 888 22 1 3 11 222222222222222222222 0 1 1 1 2222 5555 1 8 1 1 1 22222222 33 1 22 444 2 1 444 88 22222222 1 7 4 1 888 3 3 3 333333333 3333333333333 6 000 6 6 00 6 6 22222222 6 0 44444444 0 555555 11 11 7 888 99999999 9 9 1 1 7 11 4 2 22 9 44 5555 0 0 8 0 4 888 7
consensus : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----GTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GC------CCCCTTCTCC-TA---TC--G-----ACGACGA-TAGG-AGA----------GGGGGGGGG--CTGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT----NGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC-------------T----A-------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATCAANGGTTAGAA-T-TA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT--AAA----AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
Reference ( family-520 ) : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----ATATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCAC-GC------CCCCTTCTCC-TA---TC--G-----ACGACGA-TAGG-AGA----------GGGGGGGGG--CTGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTNA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT----TGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC------------TT----A-------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATCAANGGTTAGAA-T-TA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT--AAA----AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|1 : ATCCAG-ACGAGCGTATGACGAAAGGAGGGGGGGGGGGGGGTGAGGCATATGGCCCCTTACAGATTTGA--GAAGAAAGGAATGGGACAAAGGATATATGGGATCTGTG----------ATCATTT--A-CATATGA-----------AAAT-GATT--A-TAAG--AGAAATATCATTATTG-----AAAAAATGCTCACTCCTTTTTATGCAGGTTCT-AGCTGT--CAAAA---CGT-TGAAATCATATTATCTCTGTA-TCC--ATGCTCAGTATATTTAATTACCGACTTAATTTTAGCTATTTTTCTGGTGAATCCTTACAATTCCTGCTTGTTCCACGCAATCTAACAACGGTGGTAAATGAAAGTTTTAATAATAATCAATGAGTTCATTTCCAATGAAATTTCAAATATTCATCGAAGTCACTGCTC---TCCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCTTGATTCGAACAATCGGGCAATCT-AACAAA-GAGTTTCCTGGACTATTAGACCTC--GGATATAGGATGACTGCCCGTATTTGGATAGGAATCGCTCTGTTAAGCATGGTTACCCACAATTGATATATCTCTAATTTCT-----AT---TCCTATT--GCTTTGT-AATTCATTCTGATTAAAAACCACCAC------CCCCTTCTCAATA---T---G-----ACGACGAACAGGGAGA----------GGGGGGGGGGCCTGTTTTAAATCAGATTAATTTGTATTTTTATTAA-GTTTGGGGCGCCCCCCCCCC-CCATTAAAATTTAAGCTCAAGCTT-T----GTGAAAGTTTTGGTGTCACCTTAAC-TCTTTTTTAGTCCAGCTTTAATGAAAGTTTGTGTCCCCTATCGACTTCATTTTTTAGGTCAGTTTACATCACTGTCCAGGCATGGGAATTGTTTGTGGTGGGGTAATTATTCCAACTTT----GGGGGGGGGGGGTAATC-TTC-CTGTTCTTTT-GTAAATAC--------------------------ATGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TTT--------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAAAATATAGTGCATCCCTCTGATGTAAAT----A---ATG---AA---GGCACTAA-TGATAAACGCCCCTCTGGTGTAA-TAATTGTGAACATTAA---A-TA--AACGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GC-GAT-CGA---TTAA-TAACGAA--GC--AAAAAATAGAA-T-TTA-AA-AGAA-------------------TTACA--A-TGCTAAAT-TGAA-AACGTTGTTGGAT-AAAACATGGAAATTTAAAGATGTCAT-----TATATGTTAA-----ATTAATGGTTAGAA-T-TATTATAAAT-----CAAGGAG-GGT-GGCATGAAAAT--------G--AA-GAATG--CCG---TGAAATTAAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAAAGAATACAA---GGAAGG-ATGGATAAA-AAT--AAA----AAAAA-------AAC--GAAATGCCA---ACAT-TGTAAACA--TGGAAATT-AA--------G-GATGTTC--A-----TGT-AGA------AAA--TATTAGAA---ATGGA--------TT-GA-AATGACAGACGGTAACATGAGATTT--AATC-TGTCATAAAAGT-AAAAATACAATATTAGAATT----AAGAATAACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|10 : aa----------A-------------TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGAA--TAAA-TGACGAA--GC--AAAA--TACAA-T-TTA-AGCA----------------------TTACA--AATG-TAAAT-TGAA-AGTGTTA-------ATGACATGGAA-TTT---GAT-CCGT----------------------CAACGGTTA-AA-T-TA--G-A--T----ACAAGGAG-G-T-G-CATGGAA-T--------G--AA-GAAT---TCA---TGAAGC-AAAAT---A-GAAT--------TTAGAAATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAGA-AAT---------TGAAA-------ACC--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------GCGATGT-CAAA-----TATAAGA------AAA--T--TA-GA---ATGGATA------TTAAA-AATGACACAAGGTAAC-T-GAATTT--AAAA-TGTCAT-AAAGT-AAATATA-AA-GTTAGAATT----AAGAAT-A-A-GGAAGGATGCTATGGAATTATGG---CGGTGATTt
gi|11 : atagg-----TATA-GT-AATTCTAATCAAACTTTAGAA-T-TA--A-GAAT----ACAAGGAG-GAT-A-CATAAAA-TTTAACATAG--AATGAGTG--TCA---TGTAGC-AAAAT---A-GCAT--------TTAG-AA------TTAGCCT--A-CA--ACAA---GGA-TG-ATGCATATA-CAT--GAACTGCATGAA-------A-T--ACAATAC-AT--GTAT-TGTAC-CCGTTGGAA-TT-AA--------G-GATGT-C--A-----TAT-AGGCCTAGCAAA--T--TATGA---ATGGAAA------TTCAA-AATGACACTAGGTAACATGGAATTA--AAAA-TGTCAT-AAAGT--AAAATACAA-ATT----T---------AT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|12 : ca-AG-----ATCAAAGGTTAGAA-T-TA--A-GTAT----ATAA-------T-G-CATGGAA-T--------G--AC-GAATG--TCA---TGAAGC-AAAAT---T-TCGT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGT-GA-ATGCATAAA-AAT---------AGAAA-------A-CG-GAAAGGC-A---ATAT-TGTAT-CA--TGGAA-TT-AAGGATCATTG-GATGC-C--A-----TGT-AGG------AAA--T--TAAGA---ATGGATA------TT-GA-AATGACACAAGGTAACATGGAATTT--AAAA-TGTTAT-GAAGT--AAAATATAA-ATTAGATTT----AAGAAT-AC----AAGGATGA-ATGGAATTATGG---CGGTGATTCCCTTCCat
gi|13 : tttaa---------TC---------AGCAAAA-ATTCATCCGGG--TTTTTTGAAAGGGAGCATTCGTTGTGGCA--TATAGTGCG-CCCTCTGGTGCAA-T----A---ATG---A----GGCATTAAATGATAAAAGCCC-TCTGGTGTAA-CGAT-GTGA-CATTAA---A--A--A-T-AATG--CAA-----CA----------A-------------AGCAT--AAT-AAAAT------T-GAC----A-GTAGAT-CGATACTTAC-TGACGAA--GC--AAAA--TATAA-T-TTA-AG-ATGAAGCAAAATATAATTTAAGATTACA--AATA-TTAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTGAAGATGTCA------TATA-GT-AA-----AGCAAATGTTAGatag
gi|14 : gcttgAATGCCC-TCTGGCGTAA-TAAT-GAAA-CATGAA---A-TG--A-TAAATG--CAA--------------------------------TGAC--AGG-ATTAA------C-AA-----G-AAAGAT--GA-----AA-CGG-GAACTGT--AGA---TGGAA-T-CTA----------------------------TAAA--ATTG-GATGT-TGAA-T-TGC-AC--GGTCGTAAATTAGAA-TTTTAA-ATGT--------------------------AACG-----AA-TGCG--A-AAAT----ACAATGAG-G-T-G----AGAA-G--------G--AA-TATTG--TAAGAATGAAAC-AAAATGAAA-GCAAAAGGAAAACTGA-AACCAAAGTTAGAATTAA-GAATACCT---GAA-GG-GTGCATAGA-ATT--A
gi|15 : gcgaacgcA----------A-------------TTTAC--ATG-AAAAT------CGAA-----A-GTAGAG-CGA---TAAA-TGACGAA--GT--AAAA--TTGAA-T-TCA-AG-A----------------------TTACA--------------------TGTTAT--GAT-ATAACATGGAA-TTTAAAAATGTCAT------ATC-GA-AA-----ATCAAAGATTAGAA-A-TA--A-GAAT----ACAAGGAA-GAT-G-CATGGAA-G--------G--AA-GAATG--CCA---TGAAGC-AAAAT---A--------------------TAAA--TTAGAATTAA-GAATACAA---GAA-GG-ATGCA-AAG-AAT--tggcagtatttcgattccat
gi|16 : ataatgccacacaaaattcatacgcaaaccgcacataaattCCC-T-TGTTGTAA-TAAT-GTGA-CATTAACGAA-TA----CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGA---TAAA-TGACGAA--GC--AAAT--AAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAA-T-TGAA-----TTAT--GA------CATGGAA-TTTAAAGAT---------------------------CAACGGTTAGAA-T-TA--AGAAAT----ACAAGGAG-GAT-G-CATGGAG-T--------GG-AA-GAATG--TCA---TGAAGC-AAAGT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAtatggcggtgattcccttccataattgt
gi|17 : T--GAT-GTAACATGGAA-TT-AAAG-TATAAG-----TTGA-GA-GA-----ATCAAAAGTTAGAA-T-TA--A-GAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGTAGC-AAAAT---A-ACAT--------TT-----TAA-----------AA-GAACACA------A-GG-ATACATAAA-AAC---------AGAAA-------A-CT-GATATGC-A---ATAT-TGTAA-CA--TGGAA-TT-AA--------G-AATGT-C--A-----TGT-AGG------A
gi|18 : CGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAATGAAGCATAATAGG---A-------------TTTAC--ATG-AAAAC------G-AA-----A-ATAGTT-CGA---TAAA-TGACAAA--GC--AAGA--TAGAA-T-TTA-AG-A----------------------TT--A--AATG--GAAT-TTAA-A-
gi|19 : aggcagacttatgaattcataggggATTTTTATGAAAGTTTTGA-GACACCCTCCTCACTATTT---TTTCAGCCCA-GCTTAT----ATAAAAGTTT--GTG-TCCCTCA-C----TTTTTAGCCCAGCTTTA-gatcaaaggttagaattaa
gi|2 : gctgtgcaATCCAGGACGAGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----TC----ATTT-----A-CATATGA-------------AT-GATT--A-TAAG--AGAA-TATCATTATTG-----AAAAAATGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC----T-GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTATT--GCTTTGT-AATTCATTCTGATTAAAA-CCACCAC------CCCCTTCTCA-TA---T---G-----ACGACGA-CAGG-AGA----------GGGGGGGGG--CTGGTTTTAATCAGATTA-TTTGTATTTTTATTAA-GTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCTCA-GCTT-T----GTGAAAGTTT--GTGTCACCTTA-C-T-TTTTTTAGTCCAGCTTTA-TGAAAGTTTGTGTCCCCT--------C-TTTTTTAGGTCAGTT-ACATCACTGTCCAGGCATGGGAATTGTT-GTGGTGGGGTA-TTATCTCCACTTTGGGGGGGGGGG-----TAATC-TTCGCTGTTCTTTT-GTAAATAC--------------------------ATGCAACATTGGGTTTTTTT--T-TTAT--AAGGAA-AGTAA--GAT-G--T---T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-CGTTGT--GAT-AAAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATTAATGGTTAGAA-T-TATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--AA-GAATG--CCG---TGAATT-AAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGATAAA-AATAAAAA----AAAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCATAAAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCCgctccactgcctcaat
gi|21 : TTGTAACA--TATAGTGTG-CCCTCTGGTGTAA-T----A---ATG---A------CATTAAATGACAAACGCCC-TCTGGTGTA---GAT-GTGG-CATTAA---A-TA--A-CAATTG--CAA-----CA----------A-------------
gi|22 : ACTGTCCAGGCATGGAAATTG---GTGGAGGGG---TTATCCCTACTTT----TGGAGGGT----TAACG-TTCAATGTTCTTTT-GTAAATAC--------------------------ATGTAAAATTGGaac
gi|23 : GTCTGATTAAAA-CCA--GC------CCCCTTCTCC-TA---TC--GTCATGACGACGA-TAAG-AGAAAAAAAAAAGGGGGGGGGG--CTGGTTTTAATC
gi|24 : AATCTGATTTACC-CCAC-TCATCCCACCCCTTTGTC-TA---TTCTG-----ACGACGA-TAG---GA----------GGAGAAGGG--CTGGTCTCCATCAAACTc
gi|25 : CAGTCTGATTAAAA-CCAA-CC------TACCTTCTCC-TA---TC--G-----ACGGCGA-TAGG-AGA------------AGGAGGT--TTGGTTTTAATCAGACTG-tc
gi|26 : acAGTCTGATTAAAA-CCA--GC------CCCTTTCTCC-TA---TC--G-----TCGTCAA-GAAA-AGG----------GGGGGGGGGA-CTGGTTTTAATCAGACTG-
gi|27 : CAGTCTGATTAAAA-CAA--GT------CCCCTTCCCC-TA---TC--G-----ACGACGA-T----AGA----------TGGGGAGGG--GTG--TGTGATCAAACTG-
gi|28 : aCTGATTAAAA-CCA--GC------CCCCTTCTCC-TATCGTC--G-----ACGACGA-TAGG-AGA------------AGGGGGA--CTGGTTTTAATCAGACg
gi|29 : CAGTCTGATTAAAA-CCAG-CC------CCCCTTCTCC-TA---TC--G-----TCGACAA-TAGG-AGA------------AGGGGGG--CTGGTTTTAGT
gi|3 : ATTCAGCACGGGCGTATAAC------AGGGGGGGGGGGGG---------AT---------C---TTTGGAAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTGCCCCTCC--CACTTTTT--AACACATAATTTCTTTT--AAAAT-GATCGGA-TAAG--A--A-TGCCACGATT-------AAAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAAATGTAT-TTAA--CATATT-TCACTGAA-TCCATATNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN-NNNNNNN-NNNNN-NNNNNNNN-NNNNNNNNNNNN-NNN-N-NNTTCA------ATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GAC-AAC--AATGACGTCT--ATTCGAACTA-CATGTA-TC-------AAGAGTCTC-TGGAATAAAGGACCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTAATATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATT
gi|3 : aaattattcaatgactttcgaaacgggtgagataaTT-T----ATGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA-TGAAAGTTTGTGCCCCCC--------CTTGTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAATTA---GCGGAGGG-TA-TTATCCTCACTTT----TTGGGGT-----TAACA-TTCTCTGTTCTTTT-TAAAATAC------------CTTTTCAC------ATGGAAAGTAAGATATATGT--GACTAT----GGAA-GGGAATTGCC-GCCC---TCTGGTGA---------TCGAATTTGTCAGCAAACAATTCATCCGGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TTAATACGTATG---T----GACATTAAATAATGAACGCCC-TCTGGTGTAA-TAAT-GAGA-TATGGA---A-TG--A-CGAATG--CAA-----CA----------AAGCATAATAGTA-TTTAC--ATA-AAAAA------C-AATTCAAATGTAGAT-CGA---TGAAATGACGCA--TC--GAAA--T------------G-A--------------------------A--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGGA-TTTAAAGACGGCATATACATGTA-GT-AA-----ATCAAAGTTTAGAA-T-TA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATATAA---GGA-GG-ATGCATAAA-AAT---------AGAAA-------A-CT-TAAATTC-A---ATAT-TGTAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAAGGAAGAAT----TTT--AAAATTGTCATAACAGT-AAAAATACAG---TAGAATT----AAGAAT-AAC-AGA---ATGC-ATAtttatgaaaggttgtgccctcctacatttttttatcccagctttatgaaagtttgtgcccccccttgttttagcccagctatgccactgtccggacatgtaaattagcggagggtattatcctcactttttggggttaacattctctgttctttttaaaataccttttcacatggaaagtaagatatatgtgactatggaagggaattgccgccctctggtgatcgaatttgtcagcaaacaattcatccgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgtgacattaaataatgaacgccctctggtgtaataatgagatatggaatgacgaatgcaacaaagcataatagtatttacataaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatataaggaggatgcataaaaatagaaaacttaaattcaatattgtaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaaggaagaattttaaaattgtcataacagtaaaaatacagtagaattaagaataacagaatgcata
gi|30 : aaattattcaatgactttcgaaacgggtgagataaattcagcacgggcgtataacagggggggggggggatctttggaagaaggggcacgtgcaagtgagtttgtgcccctcccactttttaacacataatttcttttaaaatgatcggataagaatgccacgattaaaaatactcatttctaatatgctggttatcagctgtcaaaaatgtatttaacatatttcactgaatccatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgacaacaatgacgtctattcgaactacatgtatcaagagtctctggaataaaggacctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttaatatctttcattttctacatgtatctcttgttttgcttgtcaattA-GTTAGAATTTTAAGAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGACTCCCTTCC
gi|31 : gtatCAGTCTGATTGAA--CCA---------------TCTC---A---CCT-G-----ACGACGA-TGAG-TGA----------AGGAGGGG---CTCGTTTTAATCAGACTat
gi|32 : AGTCTGATTAAAA-CCA--GC------T-------------------G-----ACGACGA-TAGG-AGA----------AGGGGG-----CTTGTTTTAATCAGACT
gi|35 : --G-----ACGACGA-TAGG-AGA----------AGGGG--GG--CTGGTTTTAATCAGAC
gi|37 : AGTCCGATTAAAA-CCAA-GC------CCTCTTCTCC-TA---TC--G-----CCGactg
gi|38 : -AGG----------GGGGGGGGG--TTGGTTTTAACCAGAC
gi|39 : aaaaaaaAATTATGG---CGGTAATTCCCTTCC
gi|4 : ATTCAGCACGGGCGTATAACAGA-GG-GGGGTGGGGGGGA-T--------------CTT------TGGAGAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTG----CCCTCCACTTTTTTAA-CACATAATTT--TTTTAAAAAT-GATCGGA-TAAG--A--A-TGCCACGATT--------AAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAA---TGTATTAA--CATATT-TCatagtaata
gi|4 : aTTC-AATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GA--ACAACAATGACGT-T--ATTCGAACTA-CATGTA-TTC------AAGAGTCTC-TGGAGTA-AAGGCCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTACTATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|4 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGCCCA-G----TGGGAACGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA--GAAAGTTTGTGCCCCCC-----------TTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAAT-A---GCGGAGGG-TA-TTATCCTCACTTT----TGGGGT------TAATCATTCTCTGT-CTTTT-A-AAATAC------------CTTTTCAC------ATGGAA-GTAAGATATATGT--GACTATGGAAGGGA-ATTG-----T-GCCCCTCT--GGTGA---------TCGAATTTGTCAGCACACAATTCATC-GGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TT---A---ATACGTATGTTGACATTAAATAATGAAC-CCC-TCTGGTGTAA-TAAT-GAGA-TAG-GG---A-TG--A-CGAATG--CAA-----CA----------AAAGCTAATTAGTATTTAC--ATA-AAAAAACAATTC-AA-----ATGTAGAT-CGA---TGAAATGACGCA--TC--GAAA--T------------G-A--------------------------A--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGGA-TTTAAAGACGGCATATACATGTA-GT-AA-----ATCAAAGTTTAGAAAT-TA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATATGA---AGA-GGAATGCATAAA-AAT---------AGAAA-------A-CTTAAAATTC-----ATAT-T-TAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAA-GTAACA-GGAATTT--AAAA-TGTCAT-AAAGT-AAAAATAC-A-GTTAGAATT----AAGAAT-ACA-AGA---ATGC-ATAtttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|40 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaaggg-C--AAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-Gtt
gi|5 : TTTTAATAAT---CG-T-ATTTCATTTA-AAT-----------TATT-ATCTAAGTCAC----T-GCTCCATGACGTGAAATGCCG-AGAATTTTTTTTTAATTA----AGTGACGTCC--ATTCGAACAATCGGGCA-TTTGAACAAAAGAGTCTC-TGGACTATCGGACCTTTGGAATATAGGATGA-TGACCGTATTTG-TTAAGAATTGCTGTGTTAGGCAT----------A-TCG----ATCTC--ATTTTC-----A-ATCTCCTA--TTGCTTTGC-TATTCATTCTTACTAAAA-ACAC-
gi|5 : GGGA--CTGGTTTTAATCAGACTG-CA---ATTTTTATGAAAGT--GTG-TGTCCCCCCCCC-T--------TTTATGCCCA-GCTT-T----CTGAAAGTTT--GTGCCCCATCA-----TTTTTTAGGTCAGTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaatttttatgaaagtgtgtgtcccccccccttttatgcccagctttctgaaagtttgtgccccatcattttttaggtcagttacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|5 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTT-T----ATGAAAGTGT--GTGTCCCCCCC-C-C-TTTTAT-GCCCAGCTTTC-TGAAAGTTTGTGCCCCAT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCAGGCATGACAATTG---GTCGAGGGG-G-TTATCCCCACTTT----ATGGGGG-----TTATCGTTCACTGTTTTTTTTGTAAATACATGTAAAGTTGGTT----ATTTTCACATGGAAAGTAAGATGTTGGTGATATTAT----GGAAGAGAAT--CATCGCCC---T--AGTGACTGAATTTGTC---------AGCAAAACATTAATCCGGG--TTTTTTGAAAGGGCGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAGCGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAA------CGAA-----A-GTAGAT-TGA---TAAA-TGACGAA--GC--AAAA--TAG------------------------------------------AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|6 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaattCTTTT-GTAAATAC--------------------------ATGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TCTAC--ATGAAAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-CGTTGT--GAT-AAAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATTAATGGTTAGAA-T-TATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--AA-GAATG--CCG---TGAATT-AAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGATAAA-AATAAAAA----AAAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCAT-AAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|7 : GTAAGTAAT-GCGAACATTAATG-ACTAGTA-CGAATGTGCAAAAG--CATTAATAAGTGA-------------TTTATCGATG-AAAGC------G-AA-----A-GATGATACGA---T-AA-TGACGTA--TCTAGAGA--TAGAAATATTAGAG-A----------------------TTACAGAAATG-TATACATGAATA-TCTTAT--G-T-ATAA---GGAA-TT-AAAGAT--CAT------ATG------------TC--CGGTTAGAA-T-TA--A-AAGTCATTACAAGCATTGATAG-CATG--A-T--------GCAAA-GAATGGTTCA---TGAA-C-AAAAT---AAGAAA--------TTAG-AATAAAGATAAGCAT----AAATACAAAGCAGA-GG-ATGCACAAATAAA--AAAT---AGAAATATCTTTG-C---AAATAC-AAACACATGTGTAA-CA--TTGAA-TTAAA--------G-AAAGT-C--------TAT-AAG------AAAAGA--TAGAGCCCATGGAGAAATAGTTT-AA-CAT-ACACAA-GTAAAATGGTAATTGAAAAA-TATCAAACAACTAAAAAATAC-A-ATTA-AATT-----AGAAT-ACAGAGAAGAATTC-ATGAATTTATGGAGTCGGTAAT
gi|8 : CGGGCGTATGACGAA-GGAGGGGGGGGGGGG--TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----------GTCATTT--A-CATATGA-------------AT-GATT--A-TAAG--AGAA-TATCATTATTG-----AAAAA-TGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-AATCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAAT---CA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC----T-GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTA--TTGCTTTGT-AATTcaaccatatccatcacatcgcagctaaacgcattttgttaccctaatattatata
gi|9 : aggc--A-CACA-AATTTCTTTT--ACAATAGAATGGAATCAGTTAGAA-TA-AACGATGGTTAAAAAAAAATACTCAGTTCTATT--TGTAGGTTCTCAGCAGTTGCAAAA---T------A--CAAATT-TCT-TG----CA--ATGCACACAATCTGTA-TT
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGTGAGGGTGGGGTATCTATACTTTTTGGGATAACGTTCACTGTTTCTTTTTTTAAACCATTTAAAAGTTAGTATTTTCGCATGCAAGTAAGATATTGG
Unaligned ( gi|33 ): TTTAATCACAATTACGTGAATAATTATTCAATGACTTTCGAAAGGGTGAGATA
Unaligned ( gi|34 ): CTTATTAGCAAAAGTATTTATTGCATACAATGATACTTATATA
Unaligned ( gi|36 ): CTTATTAGCAAAGTATTATTGCATACAATGATACTTATATA
Alignments
lowQualScore : 111111111111111111111111111
lowQualScore : 222222222222222 11 2222222222222 6666666666666666666666666666666666666666 11 222222 1111111 222 11 11 1 1 1 1 1 222 444444 7777777777777777 11 111 1111 5555555 111 1 11 1111111111 11111111111 1 11 2222222222 1111 22222 3333333333 222 1111 11111 222222 1 111111111111111111111111111 1111 111 22222222222222222 66666666666666666666 11 1111 11111111 111 7777777777777777777777777777777 111111111 11111 33333333333333333333333 333333333333333333333 1111 11111111 11111111 444444444 2222222222222 111 11111111 22222222 111111 11111111 1 11
lowQualScore : 8 3 8 0 666666666666666 66666 3 11 1 6666666666666 8 7777777777777777777777777777777777777777 6 77 6 99 6 6 4 2 333333 1 6 77 99 2222222 2 99 6 444 11 8 33 0 0 0 0 0 333 999 0 6 6 3 3 6 1 333333 7 1 3333333333333333 2 99 7 6 22 6 44 9 7 6 1 6 1 222 9999 3 99 3333333 333 7 3 3 11 6 3 3 3333333333 33 3 5 88888888888 66 444 9999 1 5 3 00 8888888888 8 5 2222 77 4 33333 77 9999999999 8 0 1 000 0 8888 55555 555555 3 7 5 1 888888888888888888888888888 1 7 1 1 1 6666 666 6 77777777777777777 22222222222222222222 4 1 55 8 222 66 5 5 5555 888 88888888 3 3 3 6 000 3 44 3 44 5555555555555555555555555555555 44 3 444444444 00000 6 3 888 5 6 44 44 44 1 3 3 33 3 44444444444444444444444 0 44 3 3 777 44 1 3 3 22 444444444444444444444 1 0 3 3 7777 6666 3 3 3 3 3 44444444 44 3 44 555 0 3 555 33 11111111 3 0 0 3 555 3 3 3 222222222 1111111111111 3 000 3 3 55 3 3 33333333 3 4 11111111 4 111111 66 66 3 777 22222222 8 8 1 1 2 66 4 8 77 1 44 8888 4 4 0 4 1 777 0
lowQualScore : . . . . ............... ..... . .. . ............. . ........................................ . .. . .. . . . . ...... . . .. .. ....... . .. . ... .. . .. . . . . . ... ... . . . . . . . ...... . . ................ . .. . . .. . .. . . . . . . ... .... . .. ....... ... . . . .. . . . .......... .. . . ........... .. ... .... . . . .. .......... . . .... .. . ..... .. .......... . . . ... . .... ..... ...... . . . . ........................... . . . . . .... ... . ................. .................... . . .. . ... .. . . .... ... ........ . . . . ... . .. . .. ............................... .. . ......... ..... . . ... . . .. .. .. . . . .. . ....................... . .. . . ... .. . . . .. ..................... . . . . .... .... . . . . . ........ .. . .. ... . . ... .. ........ . . . . ... . . . ......... ............. . ... . . .. . . ........ . . ........ . ...... .. .. . ... ........ . . . . . .. . . .. . .. .... . . . . . ... .
lowQualScore : 8 2 0 8 444444444444444 88888 8 22 0 4444444444444 0 4444444444444444444444444444444444444444 7 55 7 22 7 7 2 5 333333 0 7 33 22 3333333 5 22 7 888 00 0 88 0 0 0 0 0 222 000 8 7 7 7 7 7 0 888888 3 5 0000000000000000 5 22 3 7 55 7 55 3 3 7 0 7 0 888 5555 2 22 5555555 777 3 3 1 55 2 1 1 9999999999 99 1 7 44444444444 33 777 7777 0 5 2 22 0000000000 0 7 1111 99 0 66666 55 8888888888 0 7 0 888 7 2222 22222 888888 3 5 7 7 000000000000000000000000000 0 9 0 0 0 0000 555 7 55555555555555555 11111111111111111111 3 3 77 9 111 99 0 0 6666 888 66666666 6 3 3 7 444 3 66 3 66 3333333333333333333333333333333 22 1 999999999 88888 2 1 555 1 2 22 22 22 7 1 1 44 1 99999999999999999999999 3 22 1 1 888 22 5 1 3 00 222222222222222222222 0 1 1 1 2222 5555 1 8 1 1 1 22222222 22 1 22 444 2 1 444 88 22222222 1 7 4 1 888 3 3 3 333333333 3333333333333 6 000 6 6 00 6 6 22222222 6 0 44444444 0 555555 11 11 7 888 99999999 9 9 1 1 7 11 4 2 22 9 44 5555 0 0 8 0 4 888 7
consensus : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----GTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TC-----GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT----NGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC-------------------A-------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATCAANGGTTAGAA-T-TA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT--AAA----AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
Reference ( family-520 ) : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----GTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TC-----GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT----NGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC-------------T-----A-------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATCAANGGTTAGAA-T-TA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT--AAA----AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|1 : ATCCAG-ACGAGCGTATGACGAAAGGAGGGGGGGGGGGGGGTGAGGCATATGGCCCCTTACAGATTTGA--GAAGAAAGGAATGGGACAAAGGATATATGGGATCTGTG----------ATCATTT--A-CATATGA-----------AAAT-GATT--A-TAAG--AGAAATATCATTATTG-----AAAAAATGCTCACTCCTTTTTATGCAGGTTCT-AGCTGT--CAAAA---CGT-TGAAATCATATTATCTCTGTA-TCC--ATGCTCAGTATATTTAATTACCGACTTAATTTTAGCTATTTTTCTGGTGAATCCTTACAATTCCTGCTTGTTCCACGCAATCTAACAACGGTGGTAAATGAAAGTTTTAATAATAATCAATGAGTTCATTTCCAATGAAATTTCAAATATTCATCGAAGTCACTGCTC---TCCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCTTGATTCGAACAATCGGGCAATCT-AACAAA-GAGTTTCCTGGACTATTAGACCTC--GGATATAGGATGACTGCCCGTATTTGGATAGGAATCGCTCTGTTAAGCATGGTTACCCACAATTGATATATCTCTAATTTC-------TAT-TCCTATT--GCTTTGT-AATTCATTCTGATTAAAAACCACCACCC-C-CTTCTCAATA---T------GACG--ACGAACAGGGAGA----------GGGGGGGGGGCC---TGTTTTAAATCAGATTAATTTGTATTTTTATTAA-GTTTGGGGCGCCCCCCCCCC-CCATTAAAATTTAAGCTCAAGCTT-T----GTGAAAGTTTTGGTGTCACCTTAAC-TCTTTTTTAGTCCAGCTTTAATGAAAGTTTGTGTCCCCTATCGACTTCATTTTTTAGGTCAGTTTACATCACTGTCCAGGCATGGGAATTGTTTGTGGTGGGGTAATTATTCCAACTTT----GGGGGGGGGGGGTAATC-TTC-CTGTTCTTTT-GTAAATAC---------------------------ATGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TTT--------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAAAATATAGTGCATCCCTCTGATGTAAAT----A---ATG---AA---GGCACTAA-TGATAAACGCCCCTCTGGTGTAA-TAATTGTGAACATTAA---A-TA--AACGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GC-GAT-CGA---TTAA-TAACGAA--GC--AAAAAATAGAA-T-TTA-AA-AGAA-------------------TTACA--A-TGCTAAAT-TGAA-AACGTTGTTGGAT-AAAACATGGAAATTTAAAGATGTCAT-----TATATGTTAA-----ATTAATGGTTAGAA-T-TATTATAAAT-----CAAGGAG-GGT-GGCATGAAAAT--------G--AA-GAATG--CCG---TGAAATTAAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAAAGAATACAA---GGAAGG-ATGGATAAA-AAT--AAA----AAAAA-------AAC--GAAATGCCA---ACAT-TGTAAACA--TGGAAATT-AA--------G-GATGTTC--A-----TGT-AGA------AAA--TATTAGAA---ATGGA--------TT-GA-AATGACAGACGGTAACATGAGATTT--AATC-TGTCATAAAAGT-AAAAATACAATATTAGAATT----AAGAATAACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|10 : aa----------A-------------TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGAA--TAAA-TGACGAA--GC--AAAA--TACAA-T-TTA-AGCA----------------------TTACA--AATG-TAAAT-TGAA-AGTGTTA-------ATGACATGGAA-TTT---GAT-CCGT----------------------CAACGGTTA-AA-T-TA--G-A--T----ACAAGGAG-G-T-G-CATGGAA-T--------G--AA-GAAT---TCA---TGAAGC-AAAAT---A-GAAT--------TTAGAAATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAGA-AAT---------TGAAA-------ACC--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------GCGATGT-CAAA-----TATAAGA------AAA--T--TA-GA---ATGGATA------TTAAA-AATGACACAAGGTAAC-T-GAATTT--AAAA-TGTCAT-AAAGT-AAATATA-AA-GTTAGAATT----AAGAAT-A-A-GGAAGGATGCTATGGAATTATGG---CGGTGATTt
gi|11 : atagg-----TATA-GT-AATTCTAATCAAACTTTAGAA-T-TA--A-GAAT----ACAAGGAG-GAT-A-CATAAAA-TTTAACATAG--AATGAGTG--TCA---TGTAGC-AAAAT---A-GCAT--------TTAG-AA------TTAGCCT--A-CA--ACAA---GGA-TG-ATGCATATA-CAT--GAACTGCATGAA-------A-T--ACAATAC-AT--GTAT-TGTAC-CCGTTGGAA-TT-AA--------G-GATGT-C--A-----TAT-AGGCCTAGCAAA--T--TATGA---ATGGAAA------TTCAA-AATGACACTAGGTAACATGGAATTA--AAAA-TGTCAT-AAAGT--AAAATACAA-ATT----T---------AT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|12 : ca-AG-----ATCAAAGGTTAGAA-T-TA--A-GTAT----ATAA-------T-G-CATGGAA-T--------G--AC-GAATG--TCA---TGAAGC-AAAAT---T-TCGT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGT-GA-ATGCATAAA-AAT---------AGAAA-------A-CG-GAAAGGC-A---ATAT-TGTAT-CA--TGGAA-TT-AAGGATCATTG-GATGC-C--A-----TGT-AGG------AAA--T--TAAGA---ATGGATA------TT-GA-AATGACACAAGGTAACATGGAATTT--AAAA-TGTTAT-GAAGT--AAAATATAA-ATTAGATTT----AAGAAT-AC----AAGGATGA-ATGGAATTATGG---CGGTGATTCCCTTCCat
gi|13 : tttaa---------TC---------AGCAAAA-ATTCATCCGGG--TTTTTTGAAAGGGAGCATTCGTTGTGGCA--TATAGTGCG-CCCTCTGGTGCAA-T----A---ATG---A----GGCATTAAATGATAAAAGCCC-TCTGGTGTAA-CGAT-GTGA-CATTAA---A--A--A-T-AATG--CAA-----CA----------A-------------AGCAT--AAT-AAAAT------T-GAC----A-GTAGAT-CGATACTTAC-TGACGAA--GC--AAAA--TATAA-T-TTA-AG-ATGAAGCAAAATATAATTTAAGATTACA--AATA-TTAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTGAAGATGTCA------TATA-GT-AA-----AGCAAATGTTAGatag
gi|14 : gcttgAATGCCC-TCTGGCGTAA-TAAT-GAAA-CATGAA---A-TG--A-TAAATG--CAA--------------------------------TGAC--AGG-ATTAA------C-AA-----G-AAAGAT--GA-----AA-CGG-GAACTGT--AGA---TGGAA-T-CTA----------------------------TAAA--ATTG-GATGT-TGAA-T-TGC-AC--GGTCGTAAATTAGAA-TTTTAA-ATGT--------------------------AACG-----AA-TGCG--A-AAAT----ACAATGAG-G-T-G----AGAA-G--------G--AA-TATTG--TAAGAATGAAAC-AAAATGAAA-GCAAAAGGAAAACTGA-AACCAAAGTTAGAATTAA-GAATACCT---GAA-GG-GTGCATAGA-ATT--A
gi|15 : gcgaacgcA----------A-------------TTTAC--ATG-AAAAT------CGAA-----A-GTAGAG-CGA---TAAA-TGACGAA--GT--AAAA--TTGAA-T-TCA-AG-A----------------------TTACA--------------------TGTTAT--GAT-ATAACATGGAA-TTTAAAAATGTCAT------ATC-GA-AA-----ATCAAAGATTAGAA-A-TA--A-GAAT----ACAAGGAA-GAT-G-CATGGAA-G--------G--AA-GAATG--CCA---TGAAGC-AAAAT---A--------------------TAAA--TTAGAATTAA-GAATACAA---GAA-GG-ATGCA-AAG-AAT--tggcagtatttcgattccat
gi|16 : ataatgccacacaaaattcatacgcaaaccgcacataaattCCC-T-TGTTGTAA-TAAT-GTGA-CATTAACGAA-TA----CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGA---TAAA-TGACGAA--GC--AAAT--AAGAA-T-TTA-AG-A----------------------TTACA--AATG-T-AAT-TGAA-----TTAT--G------ACATGGAA-TTTAAAG---------------------------ATCAACGGTTAGAA-T-TA--AGAAAT----ACAAGGAG-GAT-G-CATGGAG-TG-------G--AA-GAATG--TCA---TGAAGC-AAAGT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAtatggcggtgattcccttccataattgt
gi|17 : T--GAT-GTAACATGGAA-TT-AAAG-TATAAG-----TTGA-GA-GA-----ATCAAAAGTTAGAA-T-TA--A-GAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGTAGC-AAAAT---A-ACAT--------TT-----TAA-----------AA-GAACACA------A-GG-ATACATAAA-AAC---------AGAAA-------A-CT-GATATGC-A---ATAT-TGTAA-CA--TGGAA-TT-AA--------G-AATGT-C--A-----TGT-AGG------A
gi|18 : CGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAATGAAGCATAATAGG---A-------------TTTAC--ATG-AAAAC------G-AA-----A-ATAGTT-CGA---TAAA-TGACAAA--GC--AAGA--TAGAA-T-TTA-AG-A----------------------TT--A--AATG--GAAT-TTAA-A-
gi|19 : aggcagacttatgaattcataggggATTTTTATGAAAGTTTTGA-GACACCCTCCTCACTATTT---TTTCAGCCCA-GCTTAT----ATAAAAGTTT--GTG-TCCCTCA-C----TTTTTAGCCCAGCTTTA-gatcaaaggttagaattaa
gi|2 : gctgtgcaATCCAGGACGAGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----TC----ATTT-----A-CATATGA-------------AT-GATT--A-TAAG--AGAA-TATCATTATTG-----AAAAAATGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC----T-GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTATT--GCTTTGT-AATTCATTCTGATTAAAA-CCACCACCC-C-CTTCTCA-TA---T------GACG--ACGA-CAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGATTA-TTTGTATTTTTATTAA-GTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCTCA-GCTT-T----GTGAAAGTTT--GTGTCACCTTA-C-T-TTTTTTAGTCCAGCTTTA-TGAAAGTTTGTGTCCCCT--------C-TTTTTTAGGTCAGTT-ACATCACTGTCCAGGCATGGGAATTGTT-GTGGTGGGGTA-TTATCTCCACTTTGGGGGGGGGGG-----TAATC-TTCGCTGTTCTTTT-GTAAATAC---------------------------ATGCAACATTGGGTTTTTTT--T-TTAT--AAGGAA-AGTAA--GAT-G--T---T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-CGTTGT--GAT-AAAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATTAATGGTTAGAA-T-TATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--AA-GAATG--CCG---TGAATT-AAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGATAAA-AATAAAAA----AAAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCATAAAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCCgctccactgcctcaat
gi|21 : TTGTAACA--TATAGTGTG-CCCTCTGGTGTAA-T----A---ATG---A------CATTAAATGACAAACGCCC-TCTGGTGTA---GAT-GTGG-CATTAA---A-TA--A-CAATTG--CAA-----CA----------A-------------
gi|22 : ACTGTCCAGGCATGGAAATTG---GTGGAGGGG---TTATCCCTACTTT----TGGAGGGT----TAACG-TTCAATGTTCTTTT-GTAAATAC---------------------------ATGTAAAATTGGaac
gi|23 : GTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TCGTCATGACG--ACGA-TAAG-AGAAAAAAAAAAGGGGGGGGGG--C---TGGTTTTAATC
gi|24 : AGTTTGATGGAGA-CCA--GCCCTT-CTCCTCC-TA---TC-----GTCGTCAGAA-TAGACAAA----------GGGGTGGGA--TGAGTGGGGTAAATCAGATTc
gi|24 : CC-C-CTTTGTC-TA---TTCT---GACG--ACGA-TAG---GA----------GGAGAAGGG--C---TGGTCTCCATCAAACTtc
gi|25 : aatctgatttaccccactcatcccaCAGTCTGATTAAAA-CCA--ACCTAC-CTTCTCC-TA---TC-----GACG--GCGA-TAGG-AGA------------AGGAGGT--T---TGGTTTTAATCAGACTG-tc
gi|26 : acAGTCTGATTAAAA-CCA--GCCC-C-TTTCTCC-TA---TC-----GTCG--TCAA-GAAA-AGG----------GGGGGGGGGA-C---TGGTTTTAATCAGACTG-
gi|27 : CAGTCTGATTAAAA-CAA--GTCC-C-CTTCCCC-TA---TC-----GACG--ACGA-T----AGA----------TGGGGAGGG--G---TG--TGTGATCAAACTG-
gi|28 : aCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TATCGTC-----GACG--ACGA-TAGG-AGA------------AGGGGGA--C---TGGTTTTAATCAGACg
gi|29 : CAGTCTGATTAAAA-CCA--GCCC-CCCTTCTCC-TA---TC-----GTCG--ACAA-TAGG-AGA------------AGGGGGG--C---TGGTTTTAGT
gi|3 : ATTCAGCACGGGCGTATAAC------AGGGGGGGGGGGGG---------AT---------C---TTTGGAAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTGCCCCTCC--CACTTTTT--AACACATAATTTCTTTT--AAAAT-GATCGGA-TAAG--A--A-TGCCACGATT-------AAAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAAATGTAT-TTAA--CATATT-TCACTGAA-TCCATATNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN-NNNNNNN-NNNNN-NNNNNNNN-NNNNNNNNNNNN-NNN-N-NNTTCA------ATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GAC-AAC--AATGACGTCT--ATTCGAACTA-CATGTA-TC-------AAGAGTCTC-TGGAATAAAGGACCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTAATATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATT
gi|3 : aaattattcaatgactttcgaaacgggtgagataaTT-T----ATGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA-TGAAAGTTTGTGCCCCCC--------CTTGTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAATTA---GCGGAGGG-TA-TTATCCTCACTTT----TTGGGGT-----TAACA-TTCTCTGTTCTTTT-TAAAATAC-------------CTTTTCAC------ATGGAAAGTAAGATATATGT--GACTAT----GGAA-GGGAATTGCC-GCCC---TCTGGTGA---------TCGAATTTGTCAGCAAACAATTCATCCGGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TTAATACGTATG---T----GACATTAAATAATGAACGCCC-TCTGGTGTAA-TAAT-GAGA-TATGGA---A-TG--A-CGAATG--CAA-----CA----------AAGCATAATAGTA-TTTAC--ATA-AAAAA------C-AATTCAAATGTAGAT-CGA---TGAAATGACGCA--TC--GAAA--T------------G-A--------------------------A--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGGA-TTTAAAGACGGCATATACATGTA-GT-AA-----ATCAAAGTTTAGAA-T-TA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATATAA---GGA-GG-ATGCATAAA-AAT---------AGAAA-------A-CT-TAAATTC-A---ATAT-TGTAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAAGGAAGAAT----TTT--AAAATTGTCATAACAGT-AAAAATACAG---TAGAATT----AAGAAT-AAC-AGA---ATGC-ATAtttatgaaaggttgtgccctcctacatttttttatcccagctttatgaaagtttgtgcccccccttgttttagcccagctatgccactgtccggacatgtaaattagcggagggtattatcctcactttttggggttaacattctctgttctttttaaaataccttttcacatggaaagtaagatatatgtgactatggaagggaattgccgccctctggtgatcgaatttgtcagcaaacaattcatccgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgtgacattaaataatgaacgccctctggtgtaataatgagatatggaatgacgaatgcaacaaagcataatagtatttacataaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatataaggaggatgcataaaaatagaaaacttaaattcaatattgtaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaaggaagaattttaaaattgtcataacagtaaaaatacagtagaattaagaataacagaatgcata
gi|30 : aaattattcaatgactttcgaaacgggtgagataaattcagcacgggcgtataacagggggggggggggatctttggaagaaggggcacgtgcaagtgagtttgtgcccctcccactttttaacacataatttcttttaaaatgatcggataagaatgccacgattaaaaatactcatttctaatatgctggttatcagctgtcaaaaatgtatttaacatatttcactgaatccatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgacaacaatgacgtctattcgaactacatgtatcaagagtctctggaataaaggacctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttaatatctttcattttctacatgtatctcttgttttgcttgtcaattA-GTTAGAATTTTAAGAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGACTCCCTTCC
gi|31 : gtatCAGTCTGATTGAA--CCA--TC-------TCACC-T-----------GACG--ACGA-TGAG-TGA----------AGGAGGGG---C---TCGTTTTAATCAGACTat
gi|32 : AGTCTGATTAAAA-CCA--GCT------------------------GACG--ACGA-TAGG-AGA----------AGGGGG-----C---TTGTTTTAATCAGACT
gi|35 : -----GACG--ACGA-TAGG-AGA----------AGGGG--GG--C---TGGTTTTAATCAGAC
gi|37 : AGTCCGATTAAAA-CCAA-GCCC-T-CTTCTCC-TA---TC-----GCCG--actg
gi|38 : -AGG----------GGGGGGGGG--T---TGGTTTTAACCAGAC
gi|39 : aaaaaaaAATTATGG---CGGTAATTCCCTTCC
gi|4 : ATTCAGCACGGGCGTATAACAGA-GG-GGGGTGGGGGGGA-T--------------CTT------TGGAGAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTG----CCCTCCACTTTTTTAA-CACATAATTT--TTTTAAAAAT-GATCGGA-TAAG--A--A-TGCCACGATT--------AAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAA---TGTATTAA--CATATT-TCatagtaata
gi|4 : aTTC-AATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GA--ACAACAATGACGT-T--ATTCGAACTA-CATGTA-TTC------AAGAGTCTC-TGGAGTA-AAGGCCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTACTATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|4 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGCCCA-G----TGGGAACGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA--GAAAGTTTGTGCCCCCC-----------TTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAAT-A---GCGGAGGG-TA-TTATCCTCACTTT----TGGGGT------TAATCATTCTCTGT-CTTTT-A-AAATAC-------------CTTTTCAC------ATGGAA-GTAAGATATATGT--GACTATGGAAGGGA-ATTG-----T-GCCCCTCT--GGTGA---------TCGAATTTGTCAGCACACAATTCATC-GGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TT---A---ATACGTATGTTGACATTAAATAATGAAC-CCC-TCTGGTGTAA-TAAT-GAGA-TAG-GG---A-TG--A-CGAATG--CAA-----CA----------AAAGCTAATTAGTATTTAC--ATA-AAAAAACAATTC-AA-----ATGTAGAT-CGA---TGAAATGACGCA--TC--GAAA--T------------G-A--------------------------A--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGGA-TTTAAAGACGGCATATACATGTA-GT-AA-----ATCAAAGTTTAGAAAT-TA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATATGA---AGA-GGAATGCATAAA-AAT---------AGAAA-------A-CTTAAAATTC-----ATAT-T-TAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAA-GTAACA-GGAATTT--AAAA-TGTCAT-AAAGT-AAAAATAC-A-GTTAGAATT----AAGAAT-ACA-AGA---ATGC-ATAtttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|40 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaaggg-C--AAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-Gtt
gi|5 : TTTTAATAAT---CG-T-ATTTCATTTA-AAT-----------TATT-ATCTAAGTCAC----T-GCTCCATGACGTGAAATGCCG-AGAATTTTTTTTTAATTA----AGTGACGTCC--ATTCGAACAATCGGGCA-TTTGAACAAAAGAGTCTC-TGGACTATCGGACCTTTGGAATATAGGATGA-TGACCGTATTTG-TTAAGAATTGCTGTGTTAGGCAT----------A-TCG----ATCTC--ATTTTC-----A-ATCTCCTA--TTGCTTTGC-TATTCATTCTTACTAAAA-ACA--
gi|5 : GGGA--C---TGGTTTTAATCAGACTG-CA---ATTTTTATGAAAGT--GTG-TGTCCCCCCCCC-T--------TTTATGCCCA-GCTT-T----CTGAAAGTTT--GTGCCCCATCA-----TTTTTTAGGTCAGTTcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaatttttatgaaagtgtgtgtcccccccccttttatgcccagctttctgaaagtttgtgccccatcattttttaggtcagttacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|5 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTT-T----ATGAAAGTGT--GTGTCCCCCCC-C-C-TTTTAT-GCCCAGCTTTC-TGAAAGTTTGTGCCCCAT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCAGGCATGACAATTG---GTCGAGGGG-G-TTATCCCCACTTT----ATGGGGG-----TTATCGTTCACTGTTTTTTTTGTAAATACATGTAAAGTTGGTT-----ATTTTCACATGGAAAGTAAGATGTTGGTGATATTAT----GGAAGAGAAT--CATCGCCC---T--AGTGACTGAATTTGTC---------AGCAAAACATTAATCCGGG--TTTTTTGAAAGGGCGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAGCGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAA------CGAA-----A-GTAGAT-TGA---TAAA-TGACGAA--GC--AAAA--TAG------------------------------------------AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|6 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaattCTTTT-GTAAATAC---------------------------ATGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TCTAC--ATGAAAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-CGTTGT--GAT-AAAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATTAATGGTTAGAA-T-TATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--AA-GAATG--CCG---TGAATT-AAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGATAAA-AATAAAAA----AAAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCAT-AAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|7 : GTAAGTAAT-GCGAACATTAATG-ACTAGTA-CGAATGTGCAAAAG--CATTAATAAGTGA-------------TTTATCGATG-AAAGC------G-AA-----A-GATGATACGA---T-AA-TGACGTA--TCTAGAGA--TAGAAATATTAGAG-A----------------------TTACAGAAATG-TATACATGAATA-TCTTAT--G-T-ATAA---GGAA-TT-AAAGAT--CAT------ATG------------TC--CGGTTAGAA-T-TA--A-AAGTCATTACAAGCATTGATAG-CATG--A-T--------GCAAA-GAATGGTTCA---TGAA-C-AAAAT---AAGAAA--------TTAG-AATAAAGATAAGCAT----AAATACAAAGCAGA-GG-ATGCACAAATAAA--AAAT---AGAAATATCTTTG-C---AAATAC-AAACACATGTGTAA-CA--TTGAA-TTAAA--------G-AAAGT-C--------TAT-AAG------AAAAGA--TAGAGCCCATGGAGAAATAGTTT-AA-CAT-ACACAA-GTAAAATGGTAATTGAAAAA-TATCAAACAACTAAAAAATAC-A-ATTA-AATT-----AGAAT-ACAGAGAAGAATTC-ATGAATTTATGGAGTCGGTAAT
gi|8 : CGGGCGTATGACGAA-GGAGGGGGGGGGGGG--TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----------GTCATTT--A-CATATGA-------------AT-GATT--A-TAAG--AGAA-TATCATTATTG-----AAAAA-TGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-AATCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAAT---CA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC----T-GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTA--TTGCTTTGT-AATTcaaccatatccatcacatcgcagctaaacgcattttgttaccctaatattatata
gi|9 : aggc--A-CACA-AATTTCTTTT--ACAATAGAATGGAATCAGTTAGAA-TA-AACGATGGTTAAAAAAAAATACTCAGTTCTATT--TGTAGGTTCTCAGCAGTTGCAAAA---T------A--CAAATT-TCT-TG----CA--ATGCACACAATCTGTA-TT
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGTGAGGGTGGGGTATCTATACTTTTTGGGATAACGTTCACTGTTTCTTTTTTTAAACCATTTAAAAGTTAGTATTTTCGCATGCAAGTAAGATATTGG
Unaligned ( gi|33 ): TTTAATCACAATTACGTGAATAATTATTCAATGACTTTCGAAAGGGTGAGATA
Unaligned ( gi|34 ): CTTATTAGCAAAAGTATTTATTGCATACAATGATACTTATATA
Unaligned ( gi|36 ): CTTATTAGCAAAGTATTATTGCATACAATGATACTTATATA
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 222222222222222 11 2222222222222 6666666666666666666666666666666666666666 11 222222 1111111 222 11 11 1 1 1 1 1 222 444444 7777777777777777 11 111 1111 5555555 111 1 11 1111111111 11111111111 11 2222222222 1111 22222 3333333333 222 1111 11111 222222 1 00000000000000000000000000000 1111 111 22222222222222222 66666666666666666666 11 1111 11111111 111 7777777777777777777777777777777 111111111 11111 33333333333333333333333 333333333333333333333 1111 11111111 11111111 444444444 2222222222222 111 11111111 22222222 111111 11111111 1 11
lowQualScore : 8 3 8 0 666666666666666 66666 3 11 1 6666666666666 8 7777777777777777777777777777777777777777 6 77 6 99 6 6 4 2 333333 1 6 77 99 2222222 2 99 6 444 11 8 33 0 0 0 0 0 333 999 0 6 6 3 3 6 1 333333 7 1 3333333333333333 2 99 7 6 22 6 44 9 7 6 1 6 1 222 9999 3 99 3333333 333 7 3 3 11 6 3 3 3333333333 33 3 5 88888888888 66 444 9999 44 3 3 00 8888888888 8 5 2222 77 4 33333 77 9999999999 8 0 1 000 0 8888 55555 555555 3 7 5 1 22222222222222222222222222222 1 7 1 1 1 6666 666 6 77777777777777777 22222222222222222222 4 1 55 8 222 66 5 5 5555 888 88888888 3 3 3 6 000 3 44 3 44 5555555555555555555555555555555 44 3 444444444 00000 6 3 888 5 6 44 44 44 1 3 3 33 3 44444444444444444444444 0 44 3 3 777 44 3 3 44 444444444444444444444 1 0 3 3 7777 6666 3 3 3 3 3 11111111 77 3 44 555 0 3 555 33 11111111 3 0 0 3 555 3 3 3 222222222 1111111111111 3 000 3 3 55 3 3 33333333 3 4 11111111 4 111111 66 66 3 777 22222222 8 8 1 1 2 66 4 8 77 1 44 8888 4 4 0 4 1 777 0
lowQualScore : . . . . ............... ..... . .. . ............. . ........................................ . .. . .. . . . . ...... . . .. .. ....... . .. . ... .. . .. . . . . . ... ... . . . . . . . ...... . . ................ . .. . . .. . .. . . . . . . ... .... . .. ....... ... . . . .. . . . .......... .. . . ........... .. ... .... .. . . .. .......... . . .... .. . ..... .. .......... . . . ... . .... ..... ...... . . . . ............................. . . . . . .... ... . ................. .................... . . .. . ... .. . . .... ... ........ . . . . ... . .. . .. ............................... .. . ......... ..... . . ... . . .. .. .. . . . .. . ....................... . .. . . ... .. . . .. ..................... . . . . .... .... . . . . . ........ .. . .. ... . . ... .. ........ . . . . ... . . . ......... ............. . ... . . .. . . ........ . . ........ . ...... .. .. . ... ........ . . . . . .. . . .. . .. .... . . . . . ... .
lowQualScore : 8 2 0 8 444444444444444 88888 8 22 0 4444444444444 0 4444444444444444444444444444444444444444 7 55 7 22 7 7 2 5 333333 0 7 33 22 3333333 5 22 7 888 00 0 88 0 0 0 0 0 222 000 8 7 7 7 7 7 0 888888 3 5 0000000000000000 5 22 3 7 55 7 55 3 3 7 0 7 0 888 5555 2 22 5555555 777 3 3 1 55 2 1 1 9999999999 99 1 7 44444444444 33 777 7777 22 2 2 22 0000000000 0 7 1111 99 0 66666 55 8888888888 0 7 0 888 7 2222 22222 888888 3 5 7 7 99999999999999999999999999999 0 9 0 0 0 0000 555 7 55555555555555555 11111111111111111111 3 3 77 9 111 99 0 0 6666 888 66666666 6 3 3 7 444 3 66 3 66 3333333333333333333333333333333 22 1 999999999 88888 2 1 555 1 2 22 22 22 7 1 1 44 1 99999999999999999999999 3 22 1 1 888 22 1 3 11 222222222222222222222 0 1 1 1 2222 5555 1 8 1 1 1 22222222 33 1 22 444 2 1 444 88 22222222 1 7 4 1 888 3 3 3 333333333 3333333333333 6 000 6 6 00 6 6 22222222 6 0 44444444 0 555555 11 11 7 888 99999999 9 9 1 1 7 11 4 2 22 9 44 5555 0 0 8 0 4 888 7
consensus : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----GTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TC-----GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT----NGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC------A---------------------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATCAANGGTTAGAA-T-TA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT--AAA----AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
Reference ( family-520 ) : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----GTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TC-----GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT----NGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC------A---------------------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATCAANGGTTAGAA-T-TA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT--AAA----AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|1 : ATCCAG-ACGAGCGTATGACGAAAGGAGGGGGGGGGGGGGGTGAGGCATATGGCCCCTTACAGATTTGA--GAAGAAAGGAATGGGACAAAGGATATATGGGATCTGTG----------ATCATTT--A-CATATGA-----------AAAT-GATT--A-TAAG--AGAAATATCATTATTG-----AAAAAATGCTCACTCCTTTTTATGCAGGTTCT-AGCTGT--CAAAA---CGT-TGAAATCATATTATCTCTGTA-TCC--ATGCTCAGTATATTTAATTACCGACTTAATTTTAGCTATTTTTCTGGTGAATCCTTACAATTCCTGCTTGTTCCACGCAATCTAACAACGGTGGTAAATGAAAGTTTTAATAATAATCAATGAGTTCATTTCCAATGAAATTTCAAATATTCATCGAAGTCACTGCTC---TCCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCTTGATTCGAACAATCGGGCAATCT-AACAAA-GAGTTTCCTGGACTATTAGACCTC--GGATATAGGATGACTGCCCGTATTTGGATAGGAATCGCTCTGTTAAGCATGGTTACCCACAATTGATATATCTCTAATTTC-------TAT-TCCTATT--GCTTTGT-AATTCATTCTGATTAAAAACCACCACCC-C-CTTCTCAATA---T------GACG--ACGAACAGGGAGA----------GGGGGGGGGGCC---TGTTTTAAATCAGATTAATTTGTATTTTTATTAA-GTTTGGGGCGCCCCCCCCCC-CCATTAAAATTTAAGCTCAAGCTT-T----GTGAAAGTTTTGGTGTCACCTTAAC-TCTTTTTTAGTCCAGCTTTAATGAAAGTTTGTGTCCCCTATCGACTTCATTTTTTAGGTCAGTTTACATCACTGTCCAGGCATGGGAATTGTTTGTGGTGGGGTAATTATTCCAACTTT----GGGGGGGGGGGGTAATC-TTC-CTGTTCTTTT-GTAAATAC------A----------------------TGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TTT--------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAAAATATAGTGCATCCCTCTGATGTAAAT----A---ATG---AA---GGCACTAA-TGATAAACGCCCCTCTGGTGTAA-TAATTGTGAACATTAA---A-TA--AACGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GC-GAT-CGA---TTAA-TAACGAA--GC--AAAAAATAGAA-T-TTA-AA-AGAA-------------------TTACA--A-TGCTAAAT-TGAA-AACGTTGTTGGAT-AAAACATGGAAATTTAAAGATGTCAT-----TATATGTTAA-----ATTAATGGTTAGAA-T-TATTATAAAT-----CAAGGAG-GGT-GGCATGAAAAT--------G--AA-GAATG--CCG---TGAAATTAAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAAAGAATACAA---GGAAGG-ATGGATAAA-AAT--AAA----AAAAA-------AAC--GAAATGCCA---ACAT-TGTAAACA--TGGAAATT-AA--------G-GATGTTC--A-----TGT-AGA------AAA--TATTAGAA---ATGGA--------TT-GA-AATGACAGACGGTAACATGAGATTT--AATC-TGTCATAAAAGT-AAAAATACAATATTAGAATT----AAGAATAACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|10 : aa----------A-------------TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGAA--TAAA-TGACGAA--GC--AAAA--TACAA-T-TTA-AGCA----------------------TTACA--AATG-TAAAT-TGAA-AGTGTTA-------ATGACATGGAA-TTT---GAT-CCGT----------------------CAACGGTTA-AA-T-TA--G-A--T----ACAAGGAG-G-T-G-CATGGAA-T--------G--AA-GAAT---TCA---TGAAGC-AAAAT---A-GAAT--------TTAGAAATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAGA-AAT---------TGAAA-------ACC--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------GCGATGT-CAAA-----TATAAGA------AAA--T--TA-GA---ATGGATA------TTAAA-AATGACACAAGGTAAC-T-GAATTT--AAAA-TGTCAT-AAAGT-AAATATA-AA-GTTAGAATT----AAGAAT-A-A-GGAAGGATGCTATGGAATTATGG---CGGTGATTt
gi|11 : atagg-----TATA-GT-AATTCTAATCAAACTTTAGAA-T-TA--A-GAAT----ACAAGGAG-GAT-A-CATAAAA-TTTAACATAG--AATGAGTG--TCA---TGTAGC-AAAAT---A-GCAT--------TTAG-AA------TTAGCCT--A-CA--ACAA---GGA-TG-ATGCATATA-CAT--GAACTGCATGAA-------A-T--ACAATAC-AT--GTAT-TGTAC-CCGTTGGAA-TT-AA--------G-GATGT-C--A-----TAT-AGGCCTAGCAAA--T--TATGA---ATGGAAA------TTCAA-AATGACACTAGGTAACATGGAATTA--AAAA-TGTCAT-AAAGT--AAAATACAA-ATT----T---------AT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|12 : ca-AG-----ATCAAAGGTTAGAA-T-TA--A-GTAT----ATAA-------T-G-CATGGAA-T--------G--AC-GAATG--TCA---TGAAGC-AAAAT---T-TCGT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGT-GA-ATGCATAAA-AAT---------AGAAA-------A-CG-GAAAGGC-A---ATAT-TGTAT-CA--TGGAA-TT-AAGGATCATTG-GATGC-C--A-----TGT-AGG------AAA--T--TAAGA---ATGGATA------TT-GA-AATGACACAAGGTAACATGGAATTT--AAAA-TGTTAT-GAAGT--AAAATATAA-ATTAGATTT----AAGAAT-AC----AAGGATGA-ATGGAATTATGG---CGGTGATTCCCTTCCat
gi|13 : tttaa---------TC---------AGCAAAA-ATTCATCCGGG--TTTTTTGAAAGGGAGCATTCGTTGTGGCA--TATAGTGCG-CCCTCTGGTGCAA-T----A---ATG---A----GGCATTAAATGATAAAAGCCC-TCTGGTGTAA-CGAT-GTGA-CATTAA---A--A--A-T-AATG--CAA-----CA----------A-------------AGCAT--AAT-AAAAT------T-GAC----A-GTAGAT-CGATACTTAC-TGACGAA--GC--AAAA--TATAA-T-TTA-AG-ATGAAGCAAAATATAATTTAAGATTACA--AATA-TTAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTGAAGATGTCA------TATA-GT-AA-----AGCAAATGTTAGatag
gi|14 : gcttgAATGCCC-TCTGGCGTAA-TAAT-GAAA-CATGAA---A-TG--A-TAAATG--CAA--------------------------------TGAC--AGG-ATTAA------C-AA-----G-AAAGAT--GA-----AA-CGG-GAACTGT--AGA---TGGAA-T-CTA----------------------------TAAA--ATTG-GATGT-TGAA-T-TGC-AC--GGTCGTAAATTAGAA-TTTTAA-ATGT--------------------------AACG-----AA-TGCG--A-AAAT----ACAATGAG-G-T-G----AGAA-G--------G--AA-TATTG--TAAGAATGAAAC-AAAATGAAA-GCAAAAGGAAAACTGA-AACCAAAGTTAGAATTAA-GAATACCT---GAA-GG-GTGCATAGA-ATT--A
gi|15 : gcgaacgcA----------A-------------TTTAC--ATG-AAAAT------CGAA-----A-GTAGAG-CGA---TAAA-TGACGAA--GT--AAAA--TTGAA-T-TCA-AG-A----------------------TTACA--------------------TGTTAT--GAT-ATAACATGGAA-TTTAAAAATGTCAT------ATC-GA-AA-----ATCAAAGATTAGAA-A-TA--A-GAAT----ACAAGGAA-GAT-G-CATGGAA-G--------G--AA-GAATG--CCA---TGAAGC-AAAAT---A--------------------TAAA--TTAGAATTAA-GAATACAA---GAA-GG-ATGCA-AAG-AAT--tggcagtatttcgattccat
gi|16 : ataatgccacacaaaattcatacgcaaaccgcacataaattCCC-T-TGTTGTAA-TAAT-GTGA-CATTAACGAA-TA----CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGA---TAAA-TGACGAA--GC--AAAT--AAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAA-T-TGAA-----TTAT--GA------CATGGAA-TTTAAAGAT---------------------------CAACGGTTAGAA-T-TA--AGAAAT----ACAAGGAG-GAT-G-CATGGAG-T--------GG-AA-GAATG--TCA---TGAAGC-AAAGT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAtatggcggtgattcccttccataattgt
gi|17 : T--GAT-GTAACATGGAA-TT-AAAG-TATAAG-----TTGA-GA-GA-----ATCAAAAGTTAGAA-T-TA--A-GAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGTAGC-AAAAT---A-ACAT--------TT-----TAA-----------AA-GAACACA------A-GG-ATACATAAA-AAC---------AGAAA-------A-CT-GATATGC-A---ATAT-TGTAA-CA--TGGAA-TT-AA--------G-AATGT-C--A-----TGT-AGG------A
gi|18 : CGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAATGAAGCATAATAGG---A-------------TTTAC--ATG-AAAAC------G-AA-----A-ATAGTT-CGA---TAAA-TGACAAA--GC--AAGA--TAGAA-T-TTA-AG-A----------------------TT--A--AATG--GAAT-TTAA-A-
gi|19 : aggcagacttatgaattcataggggATTTTTATGAAAGTTTTGA-GACACCCTCCTCACTATTT---TTTCAGCCCA-GCTTAT----ATAAAAGTTT--GTG-TCCCTCA-C----TTTTTAGCCCAGCTTTA-gatcaaaggttagaattaa
gi|2 : gctgtgcaATCCAGGACGAGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----TC----ATTT-----A-CATATGA-------------AT-GATT--A-TAAG--AGAA-TATCATTATTG-----AAAAAATGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC----T-GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTATT--GCTTTGT-AATTCATTCTGATTAAAA-CCACCACCC-C-CTTCTCA-TA---T------GACG--ACGA-CAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGATTA-TTTGTATTTTTATT-AAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCTCA-GCTT-T----GTGAAAGTTT--GTGTCACCTTA-C-T-TTTTTTAGTCCAGCTTTA-TGAAAGTTTGTGTCCCCT--------C-TTTTTTAGGTCAGTT-ACATCACTGTCCAGGCATGGGAATTGTT-GTGGTGGGGTA-TTATCTCCACTTTGGGGGGGGGGG-----TAATC-TTCGCTGTTCTTTT-GTAAATAC----------------------------ATGCAACATTGGGTTTTTTT--T-TTAT--AAGGAA-AGTAA--GAT-G--T---T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-CGTTGT--GAT-AAAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATTAATGGTTAGAA-T-TATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--AA-GAATG--CCG---TGAATT-AAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGATAAA-AATAAAAA----AAAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCATAAAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCCgctccactgcctcaat
gi|21 : TTGTAACA--TATAGTGTG-CCCTCTGGTGTAA-T----A---ATG---A------CATTAAATGACAAACGCCC-TCTGGTGTA---GAT-GTGG-CATTAA---A-TA--A-CAATTG--CAA-----CA----------A-------------
gi|22 : ACTGTCCAGGCATGGAAATTG---GTGGAGGGG---TTATCCCTACTTT----TGGAGGGT----TAACG-TTCAATGTTCTTTT-GTAAATAC----------------------------ATGTAAAATTGGaac
gi|23 : GTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TCGTCATGACG--ACGA-TAAG-AGAAAAAAAAAAGGGGGGGGGG--C---TGGTTTTAATC
gi|24 : AGTTTGATGGAGA-CCA--GCCCTT-CTCCTCC-TA---TC-----GTCGTCAGAA-TAGACAAA----------GGGGTGGGA--TGAGTGGGGTAAATCAGATTc
gi|24 : CC-C-CTTTGTC-TA---TTCT---GACG--ACGA-TAG---GA----------GGAGAAGGG--C---TGGTCTCCATCAAACTtc
gi|25 : aatctgatttaccccactcatcccaCAGTCTGATTAAAA-CCA--ACCTAC-CTTCTCC-TA---TC-----GACG--GCGA-TAGG-AGA------------AGGAGGT--T---TGGTTTTAATCAGACTG-tc
gi|26 : acAGTCTGATTAAAA-CCA--GCCC-C-TTTCTCC-TA---TC-----GTCG--TCAA-GAAA-AGG----------GGGGGGGGGA-C---TGGTTTTAATCAGACTG-
gi|27 : CAGTCTGATTAAAA-CAA--GTCC-C-CTTCCCC-TA---TC-----GACG--ACGA-T----AGA----------TGGGGAGGG--G---TG--TGTGATCAAACTG-
gi|28 : aCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TATCGTC-----GACG--ACGA-TAGG-AGA------------AGGGGGA--C---TGGTTTTAATCAGACg
gi|29 : CAGTCTGATTAAAA-CCA--GCCC-CCCTTCTCC-TA---TC-----GTCG--ACAA-TAGG-AGA------------AGGGGGG--C---TGGTTTTAGT
gi|3 : ATTCAGCACGGGCGTATAAC------AGGGGGGGGGGGGG---------AT---------C---TTTGGAAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTGCCCCTCC--CACTTTTT--AACACATAATTTCTTTT--AAAAT-GATCGGA-TAAG--A--A-TGCCACGATT-------AAAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAAATGTAT-TTAA--CATATT-TCACTGAA-TCCATATNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN-NNNNNNN-NNNNN-NNNNNNNN-NNNNNNNNNNNN-NNN-N-NNTTCA------ATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GAC-AAC--AATGACGTCT--ATTCGAACTA-CATGTA-TC-------AAGAGTCTC-TGGAATAAAGGACCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTAATATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATT
gi|3 : aaattattcaatgactttcgaaacgggtgagataaTT-T----ATGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA-TGAAAGTTTGTGCCCCCC--------CTTGTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAATTA---GCGGAGGG-TA-TTATCCTCACTTT----TTGGGGT-----TAACA-TTCTCTGTTCTTTT-TAAAATACCTTTTCAC--------------------ATGGAAAGTAAGATATATGT--GACTAT----GGAA-GGGAATTGCC-GCCC---TCTGGTGA---------TCGAATTTGTCAGCAAACAATTCATCCGGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TTAATACGTATG---T----GACATTAAATAATGAACGCCC-TCTGGTGTAA-TAAT-GAGA-TATGGA---A-TG--A-CGAATG--CAA-----CA----------AAGCATAATAGTA-TTTAC--ATA-AAAAA------C-AATTCAAATGTAGAT-CGA---TGAAATGACGCA--TC--GAAA--T------------G-A--------------------------A--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGGA-TTTAAAGACGGCATATACATGTA-GT-AA-----ATCAAAGTTTAGAA-T-TA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATATAA---GGA-GG-ATGCATAAA-AAT---------AGAAA-------A-CT-TAAATTC-A---ATAT-TGTAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAAGGAAGAAT----TTT--AAAATTGTCATAACAGT-AAAAATACAG---TAGAATT----AAGAAT-AAC-AGA---ATGC-ATAtttatgaaaggttgtgccctcctacatttttttatcccagctttatgaaagtttgtgcccccccttgttttagcccagctatgccactgtccggacatgtaaattagcggagggtattatcctcactttttggggttaacattctctgttctttttaaaataccttttcacatggaaagtaagatatatgtgactatggaagggaattgccgccctctggtgatcgaatttgtcagcaaacaattcatccgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgtgacattaaataatgaacgccctctggtgtaataatgagatatggaatgacgaatgcaacaaagcataatagtatttacataaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatataaggaggatgcataaaaatagaaaacttaaattcaatattgtaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaaggaagaattttaaaattgtcataacagtaaaaatacagtagaattaagaataacagaatgcata
gi|30 : aaattattcaatgactttcgaaacgggtgagataaattcagcacgggcgtataacagggggggggggggatctttggaagaaggggcacgtgcaagtgagtttgtgcccctcccactttttaacacataatttcttttaaaatgatcggataagaatgccacgattaaaaatactcatttctaatatgctggttatcagctgtcaaaaatgtatttaacatatttcactgaatccatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgacaacaatgacgtctattcgaactacatgtatcaagagtctctggaataaaggacctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttaatatctttcattttctacatgtatctcttgttttgcttgtcaattA-GTTAGAATTTTAAGAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGACTCCCTTCC
gi|31 : gtatCAGTCTGATTGAA--CCA--TC-------TCACC-T-----------GACG--ACGA-TGAG-TGA----------AGGAGGGG---C---TCGTTTTAATCAGACTat
gi|32 : AGTCTGATTAAAA-CCA--GCT------------------------GACG--ACGA-TAGG-AGA----------AGGGGG-----C---TTGTTTTAATCAGACT
gi|35 : -----GACG--ACGA-TAGG-AGA----------AGGGG--GG--C---TGGTTTTAATCAGAC
gi|37 : AGTCCGATTAAAA-CCAA-GCCC-T-CTTCTCC-TA---TC-----GCCG--actg
gi|38 : -AGG----------GGGGGGGGG--T---TGGTTTTAACCAGAC
gi|39 : aaaaaaaAATTATGG---CGGTAATTCCCTTCC
gi|4 : ATTCAGCACGGGCGTATAACAGA-GG-GGGGTGGGGGGGA-T--------------CTT------TGGAGAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTG----CCCTCCACTTTTTTAA-CACATAATTT--TTTTAAAAAT-GATCGGA-TAAG--A--A-TGCCACGATT--------AAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAA---TGTATTAA--CATATT-TCatagtaata
gi|4 : aTTC-AATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GA--ACAACAATGACGT-T--ATTCGAACTA-CATGTA-TTC------AAGAGTCTC-TGGAGTA-AAGGCCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTACTATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|4 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGCCCA-G----TGGGAACGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA--GAAAGTTTGTGCCCCCC-----------TTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAAT-A---GCGGAGGG-TA-TTATCCTCACTTT----TGGGGT------TAATCATTCTCTGT-CTTTT-A-AAATACCTTTTCAC--------------------ATGGAA-GTAAGATATATGT--GACTATGGAAGGGA-ATTG-----T-GCCCCTCT--GGTGA---------TCGAATTTGTCAGCACACAATTCATC-GGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TT---A---ATACGTATGTTGACATTAAATAATGAAC-CCC-TCTGGTGTAA-TAAT-GAGA-TAG-GG---A-TG--A-CGAATG--CAA-----CA----------AAAGCTAATTAGTATTTAC--ATA-AAAAAACAATTC-AA-----ATGTAGAT-CGA---TGAAATGACGCA--TC--GAAA--T------------G-A--------------------------A--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGGA-TTTAAAGACGGCATATACATGTA-GT-AA-----ATCAAAGTTTAGAAAT-TA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATATGA---AGA-GGAATGCATAAA-AAT---------AGAAA-------A-CTTAAAATTC-----ATAT-T-TAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAA-GTAACA-GGAATTT--AAAA-TGTCAT-AAAGT-AAAAATAC-A-GTTAGAATT----AAGAAT-ACA-AGA---ATGC-ATAtttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|40 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaaggg-C--AAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-Gtt
gi|5 : TTTTAATAAT---CG-T-ATTTCATTTA-AAT-----------TATT-ATCTAAGTCAC----T-GCTCCATGACGTGAAATGCCG-AGAATTTTTTTTTAATTA----AGTGACGTCC--ATTCGAACAATCGGGCA-TTTGAACAAAAGAGTCTC-TGGACTATCGGACCTTTGGAATATAGGATGA-TGACCGTATTTG-TTAAGAATTGCTGTGTTAGGCAT----------A-TCG----ATCTC--ATTTTC-----A-ATCTCCTA--TTGCTTTGC-TATTCATTCTTACTAAAA-ACA--
gi|5 : GGGA--C---TGGTTTTAATCAGACTG-CA---ATTTTTATGAAAGT--GTG-TGTCCCCCCCCC-T--------TTTATGCCCA-GCTT-T----CTGAAAGTTT--GTGCCCCATCA-----TTTTTTAGGTCAGTTcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaatttttatgaaagtgtgtgtcccccccccttttatgcccagctttctgaaagtttgtgccccatcattttttaggtcagttacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|5 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTT-T----ATGAAAGTGT--GTGTCCCCCCC-C-C-TTTTAT-GCCCAGCTTTC-TGAAAGTTTGTGCCCCAT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCAGGCATGACAATTG---GTCGAGGGG-G-TTATCCCCACTTT----ATGGGGG-----TTATCGTTCACTGTTTTTTTTGTAAATAC------ATGTAAAGTTGGTTATTTTCACATGGAAAGTAAGATGTTGGTGATATTAT----GGAAGAGAAT--CATCGCCC---T--AGTGACTGAATTTGTC---------AGCAAAACATTAATCCGGG--TTTTTTGAAAGGGCGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAGCGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAA------CGAA-----A-GTAGAT-TGA---TAAA-TGACGAA--GC--AAAA--TAG------------------------------------------AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|6 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaattCTTTT-GTAAATAC------A----------------------TGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TCTAC--ATGAAAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-CGTTGT--GAT-AAAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATTAATGGTTAGAA-T-TATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--AA-GAATG--CCG---TGAATT-AAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGATAAA-AATAAAAA----AAAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCAT-AAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|7 : GTAAGTAAT-GCGAACATTAATG-ACTAGTA-CGAATGTGCAAAAG--CATTAATAAGTGA-------------TTTATCGATG-AAAGC------G-AA-----A-GATGATACGA---T-AA-TGACGTA--TCTAGAGA--TAGAAATATTAGAG-A----------------------TTACAGAAATG-TATACATGAATA-TCTTAT--G-T-ATAA---GGAA-TT-AAAGAT--CAT------ATG------------TC--CGGTTAGAA-T-TA--A-AAGTCATTACAAGCATTGATAG-CATG--A-T--------GCAAA-GAATGGTTCA---TGAA-C-AAAAT---AAGAAA--------TTAG-AATAAAGATAAGCAT----AAATACAAAGCAGA-GG-ATGCACAAATAAA--AAAT---AGAAATATCTTTG-C---AAATAC-AAACACATGTGTAA-CA--TTGAA-TTAAA--------G-AAAGT-C--------TAT-AAG------AAAAGA--TAGAGCCCATGGAGAAATAGTTT-AA-CAT-ACACAA-GTAAAATGGTAATTGAAAAA-TATCAAACAACTAAAAAATAC-A-ATTA-AATT-----AGAAT-ACAGAGAAGAATTC-ATGAATTTATGGAGTCGGTAAT
gi|8 : CGGGCGTATGACGAA-GGAGGGGGGGGGGGG--TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----------GTCATTT--A-CATATGA-------------AT-GATT--A-TAAG--AGAA-TATCATTATTG-----AAAAA-TGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-AATCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAAT---CA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC----T-GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTA--TTGCTTTGT-AATTcaaccatatccatcacatcgcagctaaacgcattttgttaccctaatattatata
gi|9 : aggc--A-CACA-AATTTCTTTT--ACAATAGAATGGAATCAGTTAGAA-TA-AACGATGGTTAAAAAAAAATACTCAGTTCTATT--TGTAGGTTCTCAGCAGTTGCAAAA---T------A--CAAATT-TCT-TG----CA--ATGCACACAATCTGTA-TT
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGTGAGGGTGGGGTATCTATACTTTTTGGGATAACGTTCACTGTTTCTTTTTTTAAACCATTTAAAAGTTAGTATTTTCGCATGCAAGTAAGATATTGG
Unaligned ( gi|33 ): TTTAATCACAATTACGTGAATAATTATTCAATGACTTTCGAAAGGGTGAGATA
Unaligned ( gi|34 ): CTTATTAGCAAAAGTATTTATTGCATACAATGATACTTATATA
Unaligned ( gi|36 ): CTTATTAGCAAAGTATTATTGCATACAATGATACTTATATA
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 222222222222222 11 2222222222222 6666666666666666666666666666666666666666 11 222222 1111111 222 11 11 1 1 1 1 1 222 444444 7777777777777777 11 111 1111 5555555 111 1 11 1111111111 11111111111 11 2222222222 1111 22222 3333333333 222 1111 11111 222222 1 00000000000000000000000000000 1111 111 22222222222222222 66666666666666666666 11 1111 11111111 111 7777777777777777777777777777777 111111111 11111 33333333333333333333333 333333333333333333333 1111 11111111 11111111 444444444 2222222222222 111 11111111 22222222 111111 11111111 1 11
lowQualScore : 8 3 8 0 666666666666666 66666 3 11 1 6666666666666 8 7777777777777777777777777777777777777777 6 77 6 99 6 6 4 2 333333 1 6 77 99 2222222 2 99 6 444 11 8 33 0 0 0 0 0 333 999 0 6 6 3 3 6 1 333333 7 1 3333333333333333 2 99 7 6 22 6 44 9 7 6 1 6 1 222 9999 3 99 3333333 333 7 3 3 11 6 3 3 3333333333 33 3 5 88888888888 66 444 9999 44 3 3 00 8888888888 8 5 2222 77 4 33333 77 9999999999 8 0 1 000 0 8888 55555 555555 3 7 5 1 22222222222222222222222222222 1 7 1 1 1 6666 666 6 77777777777777777 22222222222222222222 4 1 55 8 222 66 5 5 5555 888 88888888 3 3 3 6 000 3 44 3 44 5555555555555555555555555555555 44 3 444444444 00000 6 3 888 5 6 44 44 44 1 3 3 33 3 44444444444444444444444 0 44 3 3 777 44 3 3 44 444444444444444444444 1 0 3 3 7777 6666 3 3 3 3 3 11111111 77 3 44 555 0 3 555 33 11111111 3 0 0 3 555 3 3 3 222222222 1111111111111 3 000 3 3 55 3 3 33333333 3 4 11111111 4 111111 66 66 3 777 22222222 8 8 1 1 2 66 4 8 77 1 44 8888 4 4 0 4 1 777 0
lowQualScore : . . . . ............... ..... . .. . ............. . ........................................ . .. . .. . . . . ...... . . .. .. ....... . .. . ... .. . .. . . . . . ... ... . . . . . . . ...... . . ................ . .. . . .. . .. . . . . . . ... .... . .. ....... ... . . . .. . . . .......... .. . . ........... .. ... .... .. . . .. .......... . . .... .. . ..... .. .......... . . . ... . .... ..... ...... . . . . ............................. . . . . . .... ... . ................. .................... . . .. . ... .. . . .... ... ........ . . . . ... . .. . .. ............................... .. . ......... ..... . . ... . . .. .. .. . . . .. . ....................... . .. . . ... .. . . .. ..................... . . . . .... .... . . . . . ........ .. . .. ... . . ... .. ........ . . . . ... . . . ......... ............. . ... . . .. . . ........ . . ........ . ...... .. .. . ... ........ . . . . . .. . . .. . .. .... . . . . . ... .
lowQualScore : 8 2 0 8 444444444444444 88888 8 22 0 4444444444444 0 4444444444444444444444444444444444444444 7 55 7 22 7 7 2 5 333333 0 7 33 22 3333333 5 22 7 888 00 0 88 0 0 0 0 0 222 000 8 7 7 7 7 7 0 888888 3 5 0000000000000000 5 22 3 7 55 7 55 3 3 7 0 7 0 888 5555 2 22 5555555 777 3 3 1 55 2 1 1 9999999999 99 1 7 44444444444 33 777 7777 22 2 2 22 0000000000 0 7 1111 99 0 66666 55 8888888888 0 7 0 888 7 2222 22222 888888 3 5 7 7 99999999999999999999999999999 0 9 0 0 0 0000 555 7 55555555555555555 11111111111111111111 3 3 77 9 111 99 0 0 6666 888 66666666 6 3 3 7 444 3 66 3 66 3333333333333333333333333333333 22 1 999999999 88888 2 1 555 1 2 22 22 22 7 1 1 44 1 99999999999999999999999 3 22 1 1 888 22 1 3 11 222222222222222222222 0 1 1 1 2222 5555 1 8 1 1 1 22222222 33 1 22 444 2 1 444 88 22222222 1 7 4 1 888 3 3 3 333333333 3333333333333 6 000 6 6 00 6 6 22222222 6 0 44444444 0 555555 11 11 7 888 99999999 9 9 1 1 7 11 4 2 22 9 44 5555 0 0 8 0 4 888 7
consensus : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----GTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TC-----GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT----NGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC------A---------------------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATCAANGGTTAGAA-T-TA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT--AAA----AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
Reference ( family-520 ) : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----GTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TC-----GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT----NGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC------A---------------------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATCAANGGTTAGAA-T-TA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT--AAA----AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|1 : ATCCAG-ACGAGCGTATGACGAAAGGAGGGGGGGGGGGGGGTGAGGCATATGGCCCCTTACAGATTTGA--GAAGAAAGGAATGGGACAAAGGATATATGGGATCTGTG----------ATCATTT--A-CATATGA-----------AAAT-GATT--A-TAAG--AGAAATATCATTATTG-----AAAAAATGCTCACTCCTTTTTATGCAGGTTCT-AGCTGT--CAAAA---CGT-TGAAATCATATTATCTCTGTA-TCC--ATGCTCAGTATATTTAATTACCGACTTAATTTTAGCTATTTTTCTGGTGAATCCTTACAATTCCTGCTTGTTCCACGCAATCTAACAACGGTGGTAAATGAAAGTTTTAATAATAATCAATGAGTTCATTTCCAATGAAATTTCAAATATTCATCGAAGTCACTGCTC---TCCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCTTGATTCGAACAATCGGGCAATCT-AACAAA-GAGTTTCCTGGACTATTAGACCTC--GGATATAGGATGACTGCCCGTATTTGGATAGGAATCGCTCTGTTAAGCATGGTTACCCACAATTGATATATCTCTAATTTC-------TAT-TCCTATT--GCTTTGT-AATTCATTCTGATTAAAAACCACCACCC-C-CTTCTCAATA---T------GACG--ACGAACAGGGAGA----------GGGGGGGGGGCC---TGTTTTAAATCAGATTAATTTGTATTTTTATTAA-GTTTGGGGCGCCCCCCCCCC-CCATTAAAATTTAAGCTCAAGCTT-T----GTGAAAGTTTTGGTGTCACCTTAAC-TCTTTTTTAGTCCAGCTTTAATGAAAGTTTGTGTCCCCTATCGACTTCATTTTTTAGGTCAGTTTACATCACTGTCCAGGCATGGGAATTGTTTGTGGTGGGGTAATTATTCCAACTTT----GGGGGGGGGGGGTAATC-TTC-CTGTTCTTTT-GTAAATAC------A----------------------TGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TTT--------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAAAATATAGTGCATCCCTCTGATGTAAAT----A---ATG---AA---GGCACTAA-TGATAAACGCCCCTCTGGTGTAA-TAATTGTGAACATTAA---A-TA--AACGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GC-GAT-CGA---TTAA-TAACGAA--GC--AAAAAATAGAA-T-TTA-AA-AGAA-------------------TTACA--A-TGCTAAAT-TGAA-AACGTTGTTGGAT-AAAACATGGAAATTTAAAGATGTCAT-----TATATGTTAA-----ATTAATGGTTAGAA-T-TATTATAAAT-----CAAGGAG-GGT-GGCATGAAAAT--------G--AA-GAATG--CCG---TGAAATTAAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAAAGAATACAA---GGAAGG-ATGGATAAA-AAT--AAA----AAAAA-------AAC--GAAATGCCA---ACAT-TGTAAACA--TGGAAATT-AA--------G-GATGTTC--A-----TGT-AGA------AAA--TATTAGAA---ATGGA--------TT-GA-AATGACAGACGGTAACATGAGATTT--AATC-TGTCATAAAAGT-AAAAATACAATATTAGAATT----AAGAATAACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|10 : aa----------A-------------TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGAA--TAAA-TGACGAA--GC--AAAA--TACAA-T-TTA-AGCA----------------------TTACA--AATG-TAAAT-TGAA-AGTGTTA-------ATGACATGGAA-TTT---GAT-CCGT----------------------CAACGGTTA-AA-T-TA--G-A--T----ACAAGGAG-G-T-G-CATGGAA-T--------G--AA-GAAT---TCA---TGAAGC-AAAAT---A-GAAT--------TTAGAAATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAGA-AAT---------TGAAA-------ACC--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------GCGATGT-CAAA-----TATAAGA------AAA--T--TA-GA---ATGGATA------TTAAA-AATGACACAAGGTAAC-T-GAATTT--AAAA-TGTCAT-AAAGT-AAATATA-AA-GTTAGAATT----AAGAAT-A-A-GGAAGGATGCTATGGAATTATGG---CGGTGATTt
gi|11 : atagg-----TATA-GT-AATTCTAATCAAACTTTAGAA-T-TA--A-GAAT----ACAAGGAG-GAT-A-CATAAAA-TTTAACATAG--AATGAGTG--TCA---TGTAGC-AAAAT---A-GCAT--------TTAG-AA------TTAGCCT--A-CA--ACAA---GGA-TG-ATGCATATA-CAT--GAACTGCATGAA-------A-T--ACAATAC-AT--GTAT-TGTAC-CCGTTGGAA-TT-AA--------G-GATGT-C--A-----TAT-AGGCCTAGCAAA--T--TATGA---ATGGAAA------TTCAA-AATGACACTAGGTAACATGGAATTA--AAAA-TGTCAT-AAAGT--AAAATACAA-ATT----T---------AT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|12 : ca-AG-----ATCAAAGGTTAGAA-T-TA--A-GTAT----ATAA-------T-G-CATGGAA-T--------G--AC-GAATG--TCA---TGAAGC-AAAAT---T-TCGT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGT-GA-ATGCATAAA-AAT---------AGAAA-------A-CG-GAAAGGC-A---ATAT-TGTAT-CA--TGGAA-TT-AAGGATCATTG-GATGC-C--A-----TGT-AGG------AAA--T--TAAGA---ATGGATA------TT-GA-AATGACACAAGGTAACATGGAATTT--AAAA-TGTTAT-GAAGT--AAAATATAA-ATTAGATTT----AAGAAT-AC----AAGGATGA-ATGGAATTATGG---CGGTGATTCCCTTCCat
gi|13 : tttaa---------TC---------AGCAAAA-ATTCATCCGGG--TTTTTTGAAAGGGAGCATTCGTTGTGGCA--TATAGTGCG-CCCTCTGGTGCAA-T----A---ATG---A----GGCATTAAATGATAAAAGCCC-TCTGGTGTAA-CGAT-GTGA-CATTAA---A--A--A-T-AATG--CAA-----CA----------A-------------AGCAT--AAT-AAAAT------T-GAC----A-GTAGAT-CGATACTTAC-TGACGAA--GC--AAAA--TATAA-T-TTA-AG-ATGAAGCAAAATATAATTTAAGATTACA--AATA-TTAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTGAAGATGTCA------TATA-GT-AA-----AGCAAATGTTAGatag
gi|14 : gcttgAATGCCC-TCTGGCGTAA-TAAT-GAAA-CATGAA---A-TG--A-TAAATG--CAA--------------------------------TGAC--AGG-ATTAA------C-AA-----G-AAAGAT--GA-----AA-CGG-GAACTGT--AGA---TGGAA-T-CTA----------------------------TAAA--ATTG-GATGT-TGAA-T-TGC-AC--GGTCGTAAATTAGAA-TTTTAA-ATGT--------------------------AACG-----AA-TGCG--A-AAAT----ACAATGAG-G-T-G----AGAA-G--------G--AA-TATTG--TAAGAATGAAAC-AAAATGAAA-GCAAAAGGAAAACTGA-AACCAAAGTTAGAATTAA-GAATACCT---GAA-GG-GTGCATAGA-ATT--A
gi|15 : gcgaacgcA----------A-------------TTTAC--ATG-AAAAT------CGAA-----A-GTAGAG-CGA---TAAA-TGACGAA--GT--AAAA--TTGAA-T-TCA-AG-A----------------------TTACA--------------------TGTTAT--GAT-ATAACATGGAA-TTTAAAAATGTCAT------ATC-GA-AA-----ATCAAAGATTAGAA-A-TA--A-GAAT----ACAAGGAA-GAT-G-CATGGAA-G--------G--AA-GAATG--CCA---TGAAGC-AAAAT---A--------------------TAAA--TTAGAATTAA-GAATACAA---GAA-GG-ATGCA-AAG-AAT--tggcagtatttcgattccat
gi|16 : ataatgccacacaaaattcatacgcaaaccgcacataaattCCC-T-TGTTGTAA-TAAT-GTGA-CATTAACGAA-TA----CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAC------G-AA-----A-GTAGAT-CGA---TAAA-TGACGAA--GC--AAAT--AAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAA-T-TGAA-----TTAT--GA------CATGGAA-TTTAAAGAT---------------------------CAACGGTTAGAA-T-TA--AGAAAT----ACAAGGAG-GAT-G-CATGGAG-T--------GG-AA-GAATG--TCA---TGAAGC-AAAGT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAtatggcggtgattcccttccataattgt
gi|17 : T--GAT-GTAACATGGAA-TT-AAAG-TATAAG-----TTGA-GA-GA-----ATCAAAAGTTAGAA-T-TA--A-GAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGTAGC-AAAAT---A-ACAT--------TT-----TAA-----------AA-GAACACA------A-GG-ATACATAAA-AAC---------AGAAA-------A-CT-GATATGC-A---ATAT-TGTAA-CA--TGGAA-TT-AA--------G-AATGT-C--A-----TGT-AGG------A
gi|18 : CGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAATGAAGCATAATAGG---A-------------TTTAC--ATG-AAAAC------G-AA-----A-ATAGTT-CGA---TAAA-TGACAAA--GC--AAGA--TAGAA-T-TTA-AG-A----------------------TT--A--AATG--GAAT-TTAA-A-
gi|19 : aggcagacttatgaattcataggggATTTTTATGAAAGTTTTGA-GACACCCTCCTCACTATTT---TTTCAGCCCA-GCTTAT----ATAAAAGTTT--GTG-TCCCTCA-C----TTTTTAGCCCAGCTTTA-gatcaaaggttagaattaa
gi|2 : gctgtgcaATCCAGGACGAGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----TC----ATTT-----A-CATATGA-------------AT-GATT--A-TAAG--AGAA-TATCATTATTG-----AAAAAATGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC----T-GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTATT--GCTTTGT-AATTCATTCTGATTAAAA-CCACCACCC-C-CTTCTCA-TA---T------GACG--ACGA-CAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGATTA-TTTGTATTTTTATT-AAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCTCA-GCTT-T----GTGAAAGTTT--GTGTCACCTTA-C-T-TTTTTTAGTCCAGCTTTA-TGAAAGTTTGTGTCCCCT--------C-TTTTTTAGGTCAGTT-ACATCACTGTCCAGGCATGGGAATTGTT-GTGGTGGGGTA-TTATCTCCACTTTGGGGGGGGGGG-----TAATC-TTCGCTGTTCTTTT-GTAAATAC----------------------------ATGCAACATTGGGTTTTTTT--T-TTAT--AAGGAA-AGTAA--GAT-G--T---T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TCTAC--ATG-AAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-CGTTGT--GAT-AAAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATTAATGGTTAGAA-T-TATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--AA-GAATG--CCG---TGAATT-AAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGATAAA-AATAAAAA----AAAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCATAAAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCCgctccactgcctcaat
gi|21 : TTGTAACA--TATAGTGTG-CCCTCTGGTGTAA-T----A---ATG---A------CATTAAATGACAAACGCCC-TCTGGTGTA---GAT-GTGG-CATTAA---A-TA--A-CAATTG--CAA-----CA----------A-------------
gi|22 : ACTGTCCAGGCATGGAAATTG---GTGGAGGGG---TTATCCCTACTTT----TGGAGGGT----TAACG-TTCAATGTTCTTTT-GTAAATAC----------------------------ATGTAAAATTGGaac
gi|23 : GTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TCGTCATGACG--ACGA-TAAG-AGAAAAAAAAAAGGGGGGGGGG--C---TGGTTTTAATC
gi|24 : AGTTTGATGGAGA-CCA--GCCCTT-CTCCTCC-TA---TC-----GTCGTCAGAA-TAGACAAA----------GGGGTGGGA--TGAGTGGGGTAAATCAGATTc
gi|24 : CC-C-CTTTGTC-TA---TTCT---GACG--ACGA-TAG---GA----------GGAGAAGGG--C---TGGTCTCCATCAAACTtc
gi|25 : aatctgatttaccccactcatcccaCAGTCTGATTAAAA-CCA--ACCTAC-CTTCTCC-TA---TC-----GACG--GCGA-TAGG-AGA------------AGGAGGT--T---TGGTTTTAATCAGACTG-tc
gi|26 : acAGTCTGATTAAAA-CCA--GCCC-C-TTTCTCC-TA---TC-----GTCG--TCAA-GAAA-AGG----------GGGGGGGGGA-C---TGGTTTTAATCAGACTG-
gi|27 : CAGTCTGATTAAAA-CAA--GTCC-C-CTTCCCC-TA---TC-----GACG--ACGA-T----AGA----------TGGGGAGGG--G---TG--TGTGATCAAACTG-
gi|28 : aCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TATCGTC-----GACG--ACGA-TAGG-AGA------------AGGGGGA--C---TGGTTTTAATCAGACg
gi|29 : CAGTCTGATTAAAA-CCA--GCCC-CCCTTCTCC-TA---TC-----GTCG--ACAA-TAGG-AGA------------AGGGGGG--C---TGGTTTTAGT
gi|3 : ATTCAGCACGGGCGTATAAC------AGGGGGGGGGGGGG---------AT---------C---TTTGGAAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTGCCCCTCC--CACTTTTT--AACACATAATTTCTTTT--AAAAT-GATCGGA-TAAG--A--A-TGCCACGATT-------AAAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAAATGTAT-TTAA--CATATT-TCACTGAA-TCCATATNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN-NNNNNNN-NNNNN-NNNNNNNN-NNNNNNNNNNNN-NNN-N-NNTTCA------ATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GAC-AAC--AATGACGTCT--ATTCGAACTA-CATGTA-TC-------AAGAGTCTC-TGGAATAAAGGACCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTAATATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATT
gi|3 : aaattattcaatgactttcgaaacgggtgagataaTT-T----ATGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA-TGAAAGTTTGTGCCCCCC--------CTTGTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAATTA---GCGGAGGG-TA-TTATCCTCACTTT----TTGGGGT-----TAACA-TTCTCTGTTCTTTT-TAAAATACCTTTTCAC--------------------ATGGAAAGTAAGATATATGT--GACTAT----GGAA-GGGAATTGCC-GCCC---TCTGGTGA---------TCGAATTTGTCAGCAAACAATTCATCCGGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TTAATACGTATG---T----GACATTAAATAATGAACGCCC-TCTGGTGTAA-TAAT-GAGA-TATGGA---A-TG--A-CGAATG--CAA-----CA----------AAGCATAATAGTA-TTTAC--ATA-AAAAA------C-AATTCAAATGTAGAT-CGA---TGAAATGACGCA--TC--GAAA--T------------G-A--------------------------A--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGGA-TTTAAAGACGGCATATACATGTA-GT-AA-----ATCAAAGTTTAGAA-T-TA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATATAA---GGA-GG-ATGCATAAA-AAT---------AGAAA-------A-CT-TAAATTC-A---ATAT-TGTAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAAGGAAGAAT----TTT--AAAATTGTCATAACAGT-AAAAATACAG---TAGAATT----AAGAAT-AAC-AGA---ATGC-ATAtttatgaaaggttgtgccctcctacatttttttatcccagctttatgaaagtttgtgcccccccttgttttagcccagctatgccactgtccggacatgtaaattagcggagggtattatcctcactttttggggttaacattctctgttctttttaaaataccttttcacatggaaagtaagatatatgtgactatggaagggaattgccgccctctggtgatcgaatttgtcagcaaacaattcatccgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgtgacattaaataatgaacgccctctggtgtaataatgagatatggaatgacgaatgcaacaaagcataatagtatttacataaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatataaggaggatgcataaaaatagaaaacttaaattcaatattgtaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaaggaagaattttaaaattgtcataacagtaaaaatacagtagaattaagaataacagaatgcata
gi|30 : aaattattcaatgactttcgaaacgggtgagataaattcagcacgggcgtataacagggggggggggggatctttggaagaaggggcacgtgcaagtgagtttgtgcccctcccactttttaacacataatttcttttaaaatgatcggataagaatgccacgattaaaaatactcatttctaatatgctggttatcagctgtcaaaaatgtatttaacatatttcactgaatccatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgacaacaatgacgtctattcgaactacatgtatcaagagtctctggaataaaggacctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttaatatctttcattttctacatgtatctcttgttttgcttgtcaattA-GTTAGAATTTTAAGAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGACTCCCTTCC
gi|31 : gtatCAGTCTGATTGAA--CCA--TC-------TCACC-T-----------GACG--ACGA-TGAG-TGA----------AGGAGGGG---C---TCGTTTTAATCAGACTat
gi|32 : AGTCTGATTAAAA-CCA--GCT------------------------GACG--ACGA-TAGG-AGA----------AGGGGG-----C---TTGTTTTAATCAGACT
gi|35 : -----GACG--ACGA-TAGG-AGA----------AGGGG--GG--C---TGGTTTTAATCAGAC
gi|37 : AGTCCGATTAAAA-CCAA-GCCC-T-CTTCTCC-TA---TC-----GCCG--actg
gi|38 : -AGG----------GGGGGGGGG--T---TGGTTTTAACCAGAC
gi|39 : aaaaaaaAATTATGG---CGGTAATTCCCTTCC
gi|4 : ATTCAGCACGGGCGTATAACAGA-GG-GGGGTGGGGGGGA-T--------------CTT------TGGAGAGAAGG--GGCACGTG-CA--AG-----TGAG-TTTGTG----CCCTCCACTTTTTTAA-CACATAATTT--TTTTAAAAAT-GATCGGA-TAAG--A--A-TGCCACGATT--------AAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAA---TGTATTAA--CATATT-TCatagtaata
gi|4 : aTTC-AATGAA-TATCAATTATT-GTGTAGGTCAC-ACTCGGCTTAATGACGTGG-----TTTAAAATTT------GA--ACAACAATGACGT-T--ATTCGAACTA-CATGTA-TTC------AAGAGTCTC-TGGAGTA-AAGGCCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTACTATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|4 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGCCCA-G----TGGGAACGAAAGGTT--GTGCCCTCCTA-CAT-TTTTTTATCCCAGCTTTA--GAAAGTTTGTGCCCCCC-----------TTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAAT-A---GCGGAGGG-TA-TTATCCTCACTTT----TGGGGT------TAATCATTCTCTGT-CTTTT-A-AAATACCTTTTCAC--------------------ATGGAA-GTAAGATATATGT--GACTATGGAAGGGA-ATTG-----T-GCCCCTCT--GGTGA---------TCGAATTTGTCAGCACACAATTCATC-GGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TT---A---ATACGTATGTTGACATTAAATAATGAAC-CCC-TCTGGTGTAA-TAAT-GAGA-TAG-GG---A-TG--A-CGAATG--CAA-----CA----------AAAGCTAATTAGTATTTAC--ATA-AAAAAACAATTC-AA-----ATGTAGAT-CGA---TGAAATGACGCA--TC--GAAA--T------------G-A--------------------------A--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGGA-TTTAAAGACGGCATATACATGTA-GT-AA-----ATCAAAGTTTAGAAAT-TA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATATGA---AGA-GGAATGCATAAA-AAT---------AGAAA-------A-CTTAAAATTC-----ATAT-T-TAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAA-GTAACA-GGAATTT--AAAA-TGTCAT-AAAGT-AAAAATAC-A-GTTAGAATT----AAGAAT-ACA-AGA---ATGC-ATAtttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|40 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaaggg-C--AAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-Gtt
gi|5 : TTTTAATAAT---CG-T-ATTTCATTTA-AAT-----------TATT-ATCTAAGTCAC----T-GCTCCATGACGTGAAATGCCG-AGAATTTTTTTTTAATTA----AGTGACGTCC--ATTCGAACAATCGGGCA-TTTGAACAAAAGAGTCTC-TGGACTATCGGACCTTTGGAATATAGGATGA-TGACCGTATTTG-TTAAGAATTGCTGTGTTAGGCAT----------A-TCG----ATCTC--ATTTTC-----A-ATCTCCTA--TTGCTTTGC-TATTCATTCTTACTAAAA-ACA--
gi|5 : GGGA--C---TGGTTTTAATCAGACTG-CA---ATTTTTATGAAAGT--GTG-TGTCCCCCCCCC-T--------TTTATGCCCA-GCTT-T----CTGAAAGTTT--GTGCCCCATCA-----TTTTTTAGGTCAGTTcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaatttttatgaaagtgtgtgtcccccccccttttatgcccagctttctgaaagtttgtgccccatcattttttaggtcagttacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|5 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTT-T----ATGAAAGTGT--GTGTCCCCCCC-C-C-TTTTAT-GCCCAGCTTTC-TGAAAGTTTGTGCCCCAT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCAGGCATGACAATTG---GTCGAGGGG-G-TTATCCCCACTTT----ATGGGGG-----TTATCGTTCACTGTTTTTTTTGTAAATAC------ATGTAAAGTTGGTTATTTTCACATGGAAAGTAAGATGTTGGTGATATTAT----GGAAGAGAAT--CATCGCCC---T--AGTGACTGAATTTGTC---------AGCAAAACATTAATCCGGG--TTTTTTGAAAGGGCGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAGCGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAAAA------CGAA-----A-GTAGAT-TGA---TAAA-TGACGAA--GC--AAAA--TAG------------------------------------------AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|6 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaattCTTTT-GTAAATAC------A----------------------TGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA---------TT---------AGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TCTAC--ATGAAAAAG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-CGTTGT--GAT-AAAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATTAATGGTTAGAA-T-TATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--AA-GAATG--CCG---TGAATT-AAAAG---A-ACAT--------TTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGATAAA-AATAAAAA----AAAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCAT-AAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|7 : GTAAGTAAT-GCGAACATTAATG-ACTAGTA-CGAATGTGCAAAAG--CATTAATAAGTGA-------------TTTATCGATG-AAAGC------G-AA-----A-GATGATACGA---T-AA-TGACGTA--TCTAGAGA--TAGAAATATTAGAG-A----------------------TTACAGAAATG-TATACATGAATA-TCTTAT--G-T-ATAA---GGAA-TT-AAAGAT--CAT------ATG------------TC--CGGTTAGAA-T-TA--A-AAGTCATTACAAGCATTGATAG-CATG--A-T--------GCAAA-GAATGGTTCA---TGAA-C-AAAAT---AAGAAA--------TTAG-AATAAAGATAAGCAT----AAATACAAAGCAGA-GG-ATGCACAAATAAA--AAAT---AGAAATATCTTTG-C---AAATAC-AAACACATGTGTAA-CA--TTGAA-TTAAA--------G-AAAGT-C--------TAT-AAG------AAAAGA--TAGAGCCCATGGAGAAATAGTTT-AA-CAT-ACACAA-GTAAAATGGTAATTGAAAAA-TATCAAACAACTAAAAAATAC-A-ATTA-AATT-----AGAAT-ACAGAGAAGAATTC-ATGAATTTATGGAGTCGGTAAT
gi|8 : CGGGCGTATGACGAA-GGAGGGGGGGGGGGG--TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGGACAT---A--GG-----TGGG-TCTGTG----------GTCATTT--A-CATATGA-------------AT-GATT--A-TAAG--AGAA-TATCATTATTG-----AAAAA-TGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-AATCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAAT---CA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGTCAC----T-GCTTCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTA--TTGCTTTGT-AATTcaaccatatccatcacatcgcagctaaacgcattttgttaccctaatattatata
gi|9 : aggc--A-CACA-AATTTCTTTT--ACAATAGAATGGAATCAGTTAGAA-TA-AACGATGGTTAAAAAAAAATACTCAGTTCTATT--TGTAGGTTCTCAGCAGTTGCAAAA---T------A--CAAATT-TCT-TG----CA--ATGCACACAATCTGTA-TT
blockSeqs : G G . GTGAGGCATATG ACAGA A AA G GCAAG . CCCCTCCCACTTTTTAACACATAATTTCTTTTAA A GG A TT G . T T GTTAAA T . AG TG ATGTAT G . . AA AT . . . . . . . AT T . . T A . G ACTCG A T TTTTTTTAATTA G . T . TG . TT C A . C . C G ACA A . CTACATG TTT T C . CC T C . TCGTCAT TC . C AAAAAAAAAGG A GAG TTT GA A T G ACTATTT . A GGGA . T CAT T CT . G TT GTA GGGGG GT A G T T ATGTAAAGTTGGTTATTTTCACA C C T T T GATA GGA G ATTGCCGCCCTCT TCGAATTTGTC C C TT T GGG . . . TAAT CGT CGTATGTT . G . A CGA C GT . TG CAAAAGCTAATTAGTA CG A AACAATTC TTCAA T A TAC A A CT TA . A A A GA C TGAAGCAAAATATAATTTAAGAT GA . A AG . C . GT TATACATGTAGTAA C A G TTAT CATT T A A . . TTAACATA CA T GT GAA . GAA AG AAGGAAAA A . AGC . A T GAACTGC TATCTTTGC . AAC G . GT . A GGATCATT C . ATGTAC A CCTAGC AG . T CCC GAAATAGT A T G G A GA T A AA A G TTAA . G T G AGT
blockSeqs : C A . TGAGGCATATG ACAGA A AA C GCAAG . CCCTCCACTTTTTTAACACATAATTTTTTTAAA . GG . . G . C G G A . CA . TGTA T . . AA . . . . . . . . NN N . . A T . T ACTCG A C TGAACAAC C . T . TG . AA A A . A . G A ACA A . CTACATG TTT T C . A A . . TCGTC . . . G . . CA GA A T C CCATTAA . . . . C CAT T CA . G . TA T G G A . T CTTTTCACA T A T A G GA A . TCATCGCCCT TCGAATTTGTC A A TT C CTT . . . T . A . . . . TG . . . . AAGCATTAATAAGTGA . . TCG C T . A T A . . . A . . A . T . . . TA . . . GT TATACATGTAGTAA A . . TTAT . . A . . . . G . . . . . G . . . . . . . AAAAA ACTTA . T . . . . . . . . ATGTAC . . . . A . TA C T G G A . . A A A A . . . . G .
blockSeqs : C G . GAT C G . C AGG . GTCATTTACATATGA . GG . . G . C G G A . CA . CGT T . . A . . . . . . . . . T . . A T . T T A T TGACAAC C . T . TG . TC A A . A . G A C C . CA TT T . . . . . . TTCT . . . G . . T A . T T . . . . C CT T C . T . TA T T . T . A CTTTTCACA G A A A G GA A . TGCCCCTCT CTGAATTTGTC A C . T GGG . . . . . A . . . . . . . . . CAAAGCATAATAGGA . . ACG . . . . A . . . . G . . A . T . . . A . . . GT GTTGAGAGA A . . AG . . A . . . . . . . . . . G . . . . . . . AAAAA ACCG . . . . . . . . . . AAA . . . . G . AA . . G G A . . A A A A . . . . G .
blockSeqs : . . AT . A . G AGG . TCATTTACATATGA . . . . . . T T . T . AG . CGT G . . . . . . T . . T A . T T . . A C . . . C . TT T . . A . G G C A . . T . . . . . . . TC . . . G . . . . . . C CC . . . T . GG T G . T . T A G A A G G TT . . AGATGTT TC C C . C GGG . . . . . A . . . . . . . . . TGAAGCATAATAGGA . . CG . . . . A . . . . T . . A . T . . . T . . . AT TTATAGTAA A . . G . . A . . . . . . . . . . T . . . . . . . AAAT ACGG . . . . . . . . . . A . . . . A . TA . . G G G . . . A A A . . . . T .
blockSeqs : . . . . . . . G . A . CA . T . . . . . . . . G T . . A G . . . . . A C . . C . C . A . . . T . . . . . . . TC . . . G . . . . . T C A . G A . . A . T A G C A T T T . . AGATGTT TT C A . . GGG . . . . . T . . . . . . . . . CAAAGCATAATAGTA . . TT . . . . A . . . . A . . A . T . . . A . . . GT TTATAGTAA C . . A . . G . . . . . . . . . . G . . . . . . . . ACTG . . . . . . . . . . A . . . . A . GA . . G G A . . . . A G . . . . G .
blockSeqs : . . . . . TC . . . T . . . . . . . . . A C . T TT . A . . CTT . . . . . A . . . . . . . . . CAAAGCATAATAGGA . . AC . . . . T . . . . A . . A . T . . . A . . . GG TATAGTAA A . . A . . A . . . . . . . . . . G . . . . . . . . ACTT . . . . . . . . . . A . . . . G . AA . . G G G . . . . A G . . . . T .
blockSeqs : . . . . . TC . . . A . . . . . . . A . . . . . . . . . CAA . . CG . . . . G . . . . A . . A . T . . . A . . . GG TATCGAAA C . . A . . A . . . . . . . . . . A . . . . . . . . ATA . . . . . . . . . . A . . . . G . AA . . . . T . . . . . A . . . . A .
blockSeqs : . . . . . TC . . . A . . . . . . . . . . . CAA . . CG . . . . G . . . . A . . A . T . . . A . . . GT TATG A . . A . . G . . . . . . . . . . A . . . . . . . . ACG . . . . . . . . . . A . . . . . . GA . . . . . . . . . . A . . . . .
blockSeqs : . . . . . TC . . . A . . . . . . . . . . . CAA . . GC . . . . A . . . . A . . . . . . . . A . . . C T T . . A . . A . . . . . . . . . . G . . . . . . . . ACG . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . T . . . G . . . . . . . . . . . CAA . . AC . . . . T . . . . A . . . . . . . . A . . . . . A . . A . . . . . . . . . . . . . G . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . GC . . . . . . . . . . . . . . . . . . . . . . . . A . . A . . . . . . . . . . . . . A . . . . . . .
blockSeqs : . . . . . . . . . . . . . . CG . . . . . . . . . . . . . . . . . . . . . T . . A . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . C
blockSeqs : . .
blockSeqCons : GTAT*********** AGG********** NCCATTTACATATGA************************* GG G***** CG ** AT* T** T***** ** TG G** C*** ** TT* ** TC******** ** ** CAT** T* C********* *** TA** G***** TGAATTTGTC********** ** A******* ** T********************** A** ** TATAGTAA************* A*** ********* ** NA****** A* A*
originalCons : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGG-TGAGGCATATG--CCCTTACAGATTTGAAAGAAGGAAGGNACGTG-CA--GG-----TGGG-TCTGTG----TCC--CATTTTTT--A-CACATGATTT--TTT--AAAAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCAC-GCTC-GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----GTATCTCCTATTTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TC-----GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-T-TTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGGTA-TTATCCCCACTTT----NGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC------A---------------------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA---------TC---------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AATG-TAAAT-TGAA-A-TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCAT-----TATA-GT-AA-----ATCAANGGTTAGAA-T-TA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT--AAA----AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
finalCons : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGGGTAT-----------CCCTTACAGATTTGAAAGAAGGAAGGNACGTAGG----------TGGG-TCTGTGNCCATTTACATATGA-------------------------AAT-GATTGGA-TAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATAT-CAT--AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGTCACT-----GCTTCATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCC---TTGATATATCTC--ATTTCC-----GTATCTCCTATT-TGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TATC--------GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCACAT--TTTTTTAGCCCAGCTTTAT-GAAAGTTTGTGCCCCCTC---------TTTTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGGAGGGTA--TTATCCCCACTTT----NGGGGGG-----TAATC-TTCNCTGTTCTTTT-GTAAATAC------A---------------------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGATGAATTTGTC----------AGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATGA-------GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CAA-----CA----------A-------------TTTAC--ATG-AAAAN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAA--GC--AAAA--TAGAA-T-TTA-AG-AT----------------------TACA--AATG-TAAAT-TGAAA--TGTTAT--GAT-ATAACATGGAA-TTTAAAGATGTCATATAGTAA-------------ATCAANGGTTAGAA-T-TAA---AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--AA-GAATG--TCA---TGAAGC-AAAAT---A-GCAT--------TTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCATAAA-AAT---------AGAAA-------A-C--GAAATGC-A---ACAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGANA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGTA-AAAATACAAA-TTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGTGAGGGTGGGGTATCTATACTTTTTGGGATAACGTTCACTGTTTCTTTTTTTAAACCATTTAAAAGTTAGTATTTTCGCATGCAAGTAAGATATTGG
Unaligned ( gi|33 ): TTTAATCACAATTACGTGAATAATTATTCAATGACTTTCGAAAGGGTGAGATA
Unaligned ( gi|34 ): CTTATTAGCAAAAGTATTTATTGCATACAATGATACTTATATA
Unaligned ( gi|36 ): CTTATTAGCAAAGTATTATTGCATACAATGATACTTATATA
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 1111 888888888888888888888888888888888888 111 22 22222 44444444444444444444444444444444444444444444 22 222222 1111111 222 11 11 1 1 1 1 1 1111 11 11 7777777777777777 11 111 3333 5555555 22 1 11 1111111111 11111111111 11 2222222222 1111 111 4444444444 222 1 11111 111111 1 00000000000000000000000000000 1111 111 22222222222222222 4444444444 11 1111 11111111 111 11111 777777777777777777777777 111111111 11111 33333333333333333333333 11 22222222222222222222222222 1111 11111111 11111 2222222222222222222 111111 11111111 22222222 111111 111111 1 11
lowQualScore : 8 7777 999999999999999999999999999999999999 8 8 999 1 22 00000 8 1 44444444444444444444444444444444444444444444 00 99 6 6 4 2 333333 1 6 77 99 2222222 2 99 6 444 11 8 33 0 0 0 0 0 1111 999 0 6 6 3 3 6 1 88 88 99 7 1 3333333333333333 2 99 7 6 22 6 44 9 7 6 1 6 1 222 6666 99 3333333 88 7 3 3 11 6 3 3 3333333333 33 3 5 88888888888 66 444 9999 44 3 3 00 8888888888 8 5 2222 77 4 888 77 5555555555 8 8 0 1 000 0 3 3 6 55555 999999 6 3 7 5 1 22222222222222222222222222222 1 7 1 1 1 6666 666 6 77777777777777777 2222222222 4 1 55 8 222 66 5 5 5555 888 88888888 3 3 3 6 000 3 44 3 44 555 44444 666666666666666666666666 44 3 3 666666666 00000 6 3 888 4 6 999 44 2 3 6 3 3 33333333333333333333333 1 77 3 3 3 3 6 44 3 0 00 6 77777777777777777777777777 2 3 8888 6666 3 1 3 3 3 11111111 77 555 3 44 3 55 3 0 0 3 555 3 3 88888 66666 4444444444444444444 3 666 000000 3 3 55 3 3 33333333 3 4 11111111 4 111111 66 66 3 777 5 222222 8 8 1 1 2 66 4 8 77 1 44 8888 4 4 0 4 1 777 0
lowQualScore : . .... .................................... . . ... . .. ..... . . ............................................ .. .. . . . . ...... . . .. .. ....... . .. . ... .. . .. . . . . . .... ... . . . . . . . .. .. .. . . ................ . .. . . .. . .. . . . . . . ... .... .. ....... .. . . . .. . . . .......... .. . . ........... .. ... .... .. . . .. .......... . . .... .. . ... .. .......... . . . . ... . . . . ..... ...... . . . . . ............................. . . . . . .... ... . ................. .......... . . .. . ... .. . . .... ... ........ . . . . ... . .. . .. ... ..... ........................ .. . . ......... ..... . . ... . . ... .. . . . . . ....................... . .. . . . . . .. . . .. . .......................... . . .... .... . . . . . ........ .. ... . .. . .. . . . . ... . . ..... ..... ................... . ... ...... . . .. . . ........ . . ........ . ...... .. .. . ... . ...... . . . . . .. . . .. . .. .... . . . . . ... .
lowQualScore : 8 4444 888888888888888888888888888888888888 0 0 222 0 00 00000 0 0 33333333333333333333333333333333333333333333 22 22 7 7 2 5 333333 0 7 33 22 3333333 5 22 7 888 00 0 88 0 0 0 0 0 4444 000 8 7 7 7 7 7 0 33 33 22 3 5 0000000000000000 5 22 3 7 55 7 55 3 3 7 0 7 0 888 7777 22 5555555 88 3 3 1 55 2 1 1 9999999999 99 1 7 44444444444 33 777 7777 22 2 2 22 0000000000 0 7 1111 99 0 444 55 0000000000 0 0 7 0 888 7 3 2 7 22222 222222 7 3 5 7 7 99999999999999999999999999999 0 9 0 0 0 0000 555 7 55555555555555555 3333333333 3 3 77 9 111 99 0 0 6666 888 66666666 6 3 3 7 444 3 66 3 66 888 22222 444444444444444444444444 22 1 1 888888888 88888 2 1 555 0 2 666 22 5 1 2 1 1 11111111111111111111111 5 33 1 1 1 1 2 22 3 4 99 2 33333333333333333333333333 0 1 3333 5555 1 9 1 1 1 22222222 33 444 1 22 1 00 1 7 4 1 888 3 3 33333 77777 6666666666666666666 6 444 555555 6 6 00 6 6 22222222 6 0 44444444 0 555555 11 11 7 888 3 888888 9 9 1 1 7 11 4 2 22 9 44 5555 0 0 8 0 4 888 7
consensus : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGG----G--------T-------ATG--CCCTTACAGATTTGA-AAGAA-GGAA-GGGACGTGCAGG-----TGGG-TCTGTGNCC--C--ATTT------ACATA--------TGA----------AA-TGATTGGATAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGT--CACT--GCTT--CATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCCACA-TTGATATATCTC--ATTTCC-----GTATCTCCTA-TTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TC-----GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-C-TTTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------CATT-TTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGG-AGGGTA-TTATCCCCACTTT----NGGGGGG-----T-AATC-TTCNCTGTTCTTTT-GTAAATAC------A---------------------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA-T-GAATTTGTCAGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CA---A-----CA----------A-------------TTTAC--ATG-AAA-AN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAAGC---AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AAT-G-TAAAT-TGAA-A-TGTTAT--GATATAACATGGAA-TTTAAAGATGTCA-T---ATA------GT-----AA-----ATCAANGGTTAGAA-TTA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--A---A-GAATG--TCATGAAGC-AAAATA-GCATTTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCAT-----AAAAAT-----AGAA---A-------A----C--GAAATGC-A---A------CAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGAGA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
Reference ( family-520 ) : ATCCAGCACGGGCGTATGACGAA-GGAGGGGGGGGGGGG----G--------T-------AT---CCCTTACAGATTTGA-AAGAA-GGAA-GGNACGT--AGG-----TGGG-TCTGTGNCC-----ATTT------ACATA--------TGA----------AA-TGATTGGATAAG--AGAA-TATCACGATTG-----AAAAAATGCTCACTCCTNTT-ATGCAGGTTCTCGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCNAAGT--CACT--GCTT--CATGACGTGAAATGTTTTAGAATTT------GA--A----AGTGACGTCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTCTC-TGGACTATNAGACCTCCGGAATATAGGATGA-TGNCCGTATTTG-ATAGGAATCGCTNTGTTAGGCATG--TACCC-C--TTGATATATCTC--ATTTCC-----GTATCTCCTA-TTTGCTTTGT-AATTCAGTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TC-----GACG--ACGA-TAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGACTG-TTTGTATTTTTATNAAAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCCCA-GCTT-T----ATGAAAGTTT--GTGCCCCCCCA-CATTTTTTTAGCCCAGCTTTA-TGAAAGTTTGTGCCCCCT--------C-TT-TTTTAGGTCAGTT-ACGCCACTGTCCGGGCATGGAAATTG---GCGG-AGGGTA-TTATCCCCACTTT----NGGGGGG-----T-AATC-TTCNCTGTTCTTTT-GTAAATAC------A---------------------ATGNAACGTNGGGTNTTTNT--TATTAT--AAGGAA-AGTAA--GAT-GCCC---T--GGTGA-T-GAATTTGTCAGCAAAACATTAATCCGGG--ATTTTCGAAAGGGAGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CA---A-----CA----------A-------------TTTAC--ATG-AAA-AN------C-AA-----A-GTAGAT-CGA---TNAA-TGACGAAGC---AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AAT-G-TAAAT-TGAA-A-TGTTAT--GATATAACATGGAA-TTTAAAGATGTCA-T---ATA------GT-----AA-----ATCAANGGTTAGAA-TTA--A-AAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--A---A-GAATG--TCATGAAGC-AAAATA-GCATTTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCAT-----AAAAAT-----AGAA---A-------A----C--GAAATGC-A---A------CAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGGA---ATGGANA------TT-GA-AATGACACAAGGTAACATGGGATTT--AAAA-TGTCATAAAAGT-AAAAATACAA-ATTAGAATT----AAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|1 : ATCCAG-ACGAGCGTATGACGAAAGGAGGGGGGGGGGGG----GGTGAGGCAT-------ATGGCCCCTTACAGATTTGAGAAGAAAGGAATGGGACAA--AGGATATATGGGATCTGTGATC-----ATTT------ACATA--------TGA----------AAATGATT--ATAAG--AGAAATATCATTATTG-----AAAAAATGCTCACTCCTTTTTATGCAGGTTCT-AGCTGT--CAAAA---CGT-TGAAATCATATTATCTCTGTA-TCC--ATGCTCAGTATATTTAATTACCGACTTAATTTTAGCTATTTTTCTGGTGAATCCTTACAATTCCTGCTTGTTCCACGCAATCTAACAACGGTGGTAAATGAAAGTTTTAATAATAATCAATGAGTTCATTTCCAATGAAATTTCAAATATTCATCGAAGT--CACT--GCTCTCCATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCTTGATTCGAACAATCGGGCAATCT-AACAAA-GAGTTTCCTGGACTATTAGACCTC--GGATATAGGATGACTGCCCGTATTTGGATAGGAATCGCTCTGTTAAGCATGGTTACCCACAATTGATATATCTCTAATTTC-------TAT-TCCTA-TT-GCTTTGT-AATTCATTCTGATTAAAAACCACCACCC-C-CTTCTCAATA---T------GACG--ACGAACAGGGAGA----------GGGGGGGGGGCC---TGTTTTAAATCAGATTAATTTGTATTTTTATTAA-GTTTGGGGCGCCCCCCCCCC-CCATTAAAATTTAAGCTCAAGCTT-T----GTGAAAGTTTTGGTGTCACCTTAACTCTTTTTTAGTCCAGCTTTAATGAAAGTTTGTGTCCCCTATCGACTTCATT-TTTTAGGTCAGTTTACATCACTGTCCAGGCATGGGAATTGTTTGTGGTGGGGTAATTATTCCAACTTT----GGGGGGGGGGGGT-AATC-TTC-CTGTTCTTTT-GTAAATAC------A----------------------TGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA-T--------TTAGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAAAATATAGTGCATCCCTCTGATGTAAAT----A---ATG---AA---GGCACTAA-TGATAAACGCCCCTCTGGTGTAA-TAATTGTGAACATTAA---A-TA--AACGAATG--CA---A-----CA----------A-------------TCTAC--ATG-AAA-AG------C-AA-----A-GC-GAT-CGA---TTAA-TAACGAAGC---AAAAAATAGAA-T-TTA-AA-AGAA-------------------TTACA--A-T-GCTAAAT-TGAA-AACGTTGTTGGATAAAACATGGAAATTTAAAGATGTCA-TTATATG------TT-----AA-----ATTAATGGTTAGAA-TTATTATAAAT-----CAAGGAG-GGT-GGCATGAAAAT--------G--A---A-GAATG--CCGTGAAATTAAAAGA-ACATTTAG-AATAAAAATTAGCATTAAAGAATACAA---GGAAGG-ATGGAT-----AAAAAT-----AAAA---A-------AAAAAC--GAAATGCCA---A------CAT-TGTAAACA--TGGAAATT-AA--------G-GATGTTC--A-----TGT-AGA------AAA--TATTAGAA---ATGGA--------TT-GA-AATGACAGACGGTAACATGAGATTT--AATC-TGTCATAAAAGT-AAAAATACAATATTAGAATT----AAGAATAACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|10 : aa----------A-------------TTTAC--ATG-AAA-AC------G-AA-----A-GTAGAT-CGAA--TAAA-TGACGAAGC---AAAA--TACAA-T-TTA-AGCA----------------------TTACA--AAT-G-TAAAT-TGAA-AGTGTTA------ATGACATGGAA-TTT---GAT-CCG-T----------------------------CAACGGTTA-AA-TTA--G-A--T----ACAAGGAG-G-T-G-CATGGAA-T--------G--A---A-GAAT---TCATGAAGC-AAAATA-GAATTTAGAAATAAAAGTTAGCATTAA-GAATACAA---GGA-GG-ATGCAT-----AGAAAT-----TGAA---A-------AC---C--GAAATGC-A---A------CAT-TGTAA-CA--TGGAA-TT-AA--------GCGATGT-CAAA-----TATAAGA------AAA--T--TA-GA---ATGGATA------TTAAA-AATGACACAAGGTAAC-T-GAATTT--AAAA-TGTCAT-AAAGT-AAATATA-AA-GTTAGAATT----AAGAAT-A-A-GGAAGGATGCTATGGAATTATGG---CGGTGATTt
gi|11 : ataggCA-T---ATA------GT-----AATTCTAATCAAACTTTAGAA-TTA--A-GAAT----ACAAGGAG-GAT-A-CATAAAA-TTTAACATAG--A---ATGAGTG--TCATGTAGC-AAAATA-GCATTTAG-AA------TTAGCCT--A-CA--ACAA---GGA-TG-ATGCAT-----ATACAT------GAACTGC-------A----T--GAAATAC-A---ATACATGTAT-TGTAC-CCGTTGGAA-TT-AA--------G-GATGT-C--A-----TAT-AGGCCTAGCAAA--T--TATGA---ATGGAAA------TTCAA-AATGACACTAGGTAACATGGAATTA--AAAA-TGTCAT-AAAGT--AAAATACAA-ATT----T---------AT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGATTCCCTTCC
gi|12 : -----AG-----ATCAAAGGTTAGAA-TTA--A-GTAT----ATAA-------T-G-CATGGAA-T--------G--A---C-GAATG--TCATGAAGC-AAAATT-TCGTTTAG-AATAAAAGTTAGCATTAA-GAATACAA---GGT-GA-ATGCAT-----AAAAAT-----AGAA---A-------A----CG-GAAAGGC-A---A------TAT-TGTAT-CA--TGGAA-TT-AAGGATCATTG-GATGC-C--A-----TGT-AGG------AAA--T--TAAGA---ATGGATA------TT-GA-AATGACACAAGGTAACATGGAATTT--AAAA-TGTTAT-GAAGT--AAAATATAA-ATTAGATTT----AAGAAT-AC----AAGGATGA-ATGGAATTATGG---CGGTGATTCCCTTCCat
gi|13 : tttaaTTGTCAGCAAAA-ATTCATCCGGG--TTTTTTGAAAGGGAGCATTCGTTGTGGCA--TATAGTGCG-CCCTCTGGTGCAA-T----A---ATG---A----GGCATTAAATGATAAAAGCCC-TCTGGTGTAA-CGAT-GTGA-CATTAA---A--A--A-T-AATG--CA---A-----CA----------A-------------AGCAT--AAT-AAA-AT------T-GAC----A-GTAGAT-CGATACTTAC-TGACGAAGC---AAAA--TATAA-T-TTA-AG-ATGAAGCAAAATATAATTTAAGATTACA--AAT-A-TTAAT-TGAA-A-TGTTAT--GATATAACATGGAA-TTTGAAGATGTCA-T---ATA------GT-----AA-----AGCAAATGTTAGatag
gi|14 : gcAATGCCC-TCTGGCGTAA-TAAT-GAAA-CATGAA---A-TG--A-TAAATG--CAATGA-----CAGG--------A-------------TTAAC--AAG-AAAGAT------G-AA-----A-CGGGAA-CTG---TAGA-TG--GAATCTATAAAA--TTGGA-TGTTG-A--A----------------------TTGCAC-GGTCG-TAAAT-TAGA-A-TTTTA---AATGTAAC---GAA-TGCGAAA-----A-T---ACA------AT-----GA-----------GGTGAGA----A--G-GAAT----AT---------T-G-TA-AGAA-T--------G--AAACA-AAATG------AAAGC-AAAAGG-AAAACTGA-AACCAAAGTTAGAATTAA-GAATACCT---GAA-GG-GTGCAT-----AGAATT-----A
gi|15 : gcgaacgcA----------A-------------TTTAC--ATG-AAA-AT------CGAA-----A-GTAGAG-CGA---TAAA-TGACGAAGT---AAAA--TTGAA-T-TCA-AG-A----------------------TTACA---------------------TGTTAT--GATATAACATGGAA-TTTAAAAATGTCA-T---ATC------GA-----AA-----ATCAAAGATTAGAA-ATA--A-GAAT----ACAAGGAA-GAT-G-CATGGAA-G--------G--A---A-GAATG--CCATGAAGC-AAAATA------------TAAA--TTAGAATTAA-GAATACAA---GAA-GG-ATGCA------AAGAAT-----tggcagtatttcgattccat
gi|16 : ataatgccacacaaaattcatacgcaaaccgcacataaattCCC-T-TGTTGTAA-TAAT-GTGA-CATTAACGAA-TA----CGAATG--CA---A-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAA-AC------G-AA-----A-GTAGAT-CGA---TAAA-TGACGAAGC---AAAT--AAGAA-T-TTA-AG-A----------------------TTACA--AAT-G-TAA-T-TGAA-----TTAT--GA-----CATGGAA-TTTAAAGAT----------------------------------CAACGGTTAGAA-TTA--AGAAAT----ACAAGGAG-GAT-G-CATGGAG-T--------GG-A---A-GAATG--TCATGAAGC-AAAGTA-GCATTTAG-AATAAAAGTTAGCATTAA-GAtatggcggtgattcccttccataattgt
gi|17 : T--GATGTAACATGGAA-TT-AAAG----TA-T---A-A------GTTGAGAGA-----ATCAAAAGTTAGAA-TTA--A-GAAT----ACAAGGAG-GAT-G-CATGGAA-T--------G--A---A-GAATG--TCATGTAGC-AAAATA-ACATTT-----TAA-----------AA-GAACACA------A-GG-ATACAT-----AAAAAC-----AGAA---A-------A----CT-GATATGC-A---A------TAT-TGTAA-CA--TGGAA-TT-AA--------G-AATGT-C--A-----TGT-AGG------A
gi|18 : CGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CA---ATGAAGCATAATAGG---A-------------TTTAC--ATG-AAA-AC------G-AA-----A-ATAGTT-CGA---TAAA-TGACAAAGC---AAGA--TAGAA-T-TTA-AG-A----------------------TT--A--AAT-G--GAAT-TTAA-A-
gi|19 : aggcagacttatgaattcataggggATTTTTATGAAAGTTTTGA-GACACCCTCCTCACTATTT---TTTCAGCCCA-GCTTAT----ATAAAAGTTT--GTG-TCCCTCA-C---TTTTTAGCCCAGCTTTA-gatcaaaggttagaattaa
gi|2 : gctgtgcaATCCAGGACGAGCGTATGACGAA-GGAGGGGGGGGGGGG----G--------TGAGGCATATG--CCCTTACAGATTTGA-AAGAA-GGAA-GGGACAT--AGG-----TGGG-TCTGTGTC------ATTT------ACATA--------TGA----------A--TGATT--ATAAG--AGAA-TATCATTATTG-----AAAAAATGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-A-TCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATAATA-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGT--CACT--GCTT--CATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTA--TTGCTTTGT-AATTCATTCTGATTAAAA-CCACCACCC-C-CTTCTCA-TA---T------GACG--ACGA-CAGG-AGA----------GGGGGGGGG--C---TGGTTTTAATCAGATTA-TTTGTATTTTTATT-AAGTTTGGG-CGCCCCCCCCCC-CCATTAA--TTTAAGCTCA-GCTT-T----GTGAAAGTTT--GTGTCACCTTA-C-TTTTTTTAGTCCAGCTTTA-TGAAAGTTTGTGTCCCCT--------C-TT-TTTTAGGTCAGTT-ACATCACTGTCCAGGCATGGGAATTGTT-GTGGTGGGGTA-TTATCTCCACTTTGGGGGGGGGGG-----T-AATC-TTCGCTGTTCTTTT-GTAAATAC----------------------------ATGCAACATTGGGTTTTTTT--T-TTAT--AAGGAA-AGTAA--GAT-G--T---T--GGTGA----------TTAGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CA---A-----CA----------A-------------TCTAC--ATG-AAA-AG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAAGC---AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AAT-G-TAAAT-TGAA-A-CGTTGT--GATAAAACATGGAA-TTTAAAGATGTCATT---ATA------GT-----AA-----ATTAATGGTTAGAA-TTATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--A---A-GAATG--CCGTGAATT-AAAAGA-ACATTTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGAT-----AAAAATAAAAAAAAA---A-------A----C--GAAATGC-A---A------CAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCATAAAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCCgctccactgcctcaat
gi|21 : TTGTAACA--TATAGTGTG-CCCTCTGGTGTAA-T----A---ATG---A------CATTAAATGACAAACGCCC-TCTGGTGTA---GAT-GTGG-CATTAA---A-TA--A-CAATTG--CA---A-----CA----------A-------------
gi|22 : ACTGTCCAGGCATGGAAATTG---GTGG-AGGG-G-TTATCCCTACTTT----TGGAGGG-----TTAACG-TTCAATGTTCTTTT-GTAAATAC----------------------------ATGTAAAATTGGaac
gi|23 : GTCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TA---TCGTCATGACG--ACGA-TAAG-AGAAAAAAAAAAGGGGGGGGGG--C---TGGTTTTAATC
gi|24 : AGTTTGATGGAGA-CCA--GCCCTT-CTCCTCC-TA---TC-----GTCGTCAGAA-TAGACAAA----------GGGGTGGGA--TGAGTGGGGTAAATCAGATTc
gi|24 : CC-C-CTTTGTC-TA---TTCT---GACG--ACGA-TAG---GA----------GGAGAAGGG--C---TGGTCTCCATCAAACTtc
gi|25 : aatctgatttaccccactcatcccaCAGTCTGATTAAAA-CCA--ACCTAC-CTTCTCC-TA---TC-----GACG--GCGA-TAGG-AGA------------AGGAGGT--T---TGGTTTTAATCAGACTG-tc
gi|26 : acAGTCTGATTAAAA-CCA--GCCC-C-TTTCTCC-TA---TC-----GTCG--TCAA-GAAA-AGG----------GGGGGGGGGA-C---TGGTTTTAATCAGACTG-
gi|27 : CAGTCTGATTAAAA-CAA--GTCC-C-CTTCCCC-TA---TC-----GACG--ACGA-T----AGA----------TGGGGAGGG--G---TG--TGTGATCAAACTG-
gi|28 : aCTGATTAAAA-CCA--GCCC-C-CTTCTCC-TATCGTC-----GACG--ACGA-TAGG-AGA------------AGGGGGA--C---TGGTTTTAATCAGACg
gi|29 : CAGTCTGATTAAAA-CCA--GCCC-CCCTTCTCC-TA---TC-----GTCG--ACAA-TAGG-AGA------------AGGGGGG--C---TGGTTTTAGT
gi|3 : ATTCAGCACGGGCGTATAAC------AGGGGGGGGGGGG----G----------------AT---C---------TTTGG-AAGAA-GG---GGCACGTGCAAG-----TGAG-TTTGTGCCCCTCCCACTTTTTAACACATAATTTCTTTTAA----------AA-TGATCGGATAAG--A--A-TGCCACGATT-------AAAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAAATGTAT-TTAA--CATATT-TCACTGAA-TCCATATNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN-NNNNNNN-NNNNN-NNNNNNNN-NNNNNNNNNNNN-NNN-N-NNTTCA------ATGAA-TATCAATTATT-GTGTAGGTCACACTCGGCTT--AATGACGTGG-----TTTAAAATTT------GAC-AAC--AATGACGTCT--ATTCGAACTA-CATGTA-TC-------AAGAGTCTC-TGGAATAAAGGACCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTAATATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATT
gi|3 : aaattattcaatgactttcgaaacgggtgagataaTT-T----ATGAAAGGTT--GTGCCCTCCTA-CATTTTTTTATCCCAGCTTTA-TGAAAGTTTGTGCCCCCC--------C-TTGTTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAATTA---GCGG-AGGGTA-TTATCCTCACTTT----TTGGGGT-----T-AACA-TTCTCTGTTCTTTT-TAAAATACCTTTTCAC--------------------ATGGAAAGTAAGATATATGT--GACTAT----GGAA-GGGAATTGCC-GCCC---TCTGGTGA-TCGAATTTGTCAGCAAACAATTCATCCGGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TTAATACGTATG---T----GACATTAAATAATGAACGCCC-TCTGGTGTAA-TAAT-GAGA-TATGGA---A-TG--A-CGAATG--CA---A-----CA----------AAGCATAATAGTA-TTTAC--ATA-AAA-AA------C-AATTCAAATGTAGAT-CGA---TGAAATGACGCATC---GAAA--T------------G-A--------------------------A--AAT-G-TAAAT-TGAA-A-TGTTAT--GATATAACATGGGA-TTTAAAGACGGCA-T---ATACATGTAGT-----AA-----ATCAAAGTTTAGAA-TTA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--A---A-GAATG--TCATGAAGC-AAAATA-GCATTTAG-AATAAAAGTTAGCATTAA-GAATATAA---GGA-GG-ATGCAT-----AAAAAT-----AGAA---A-------A----CT-TAAATTC-A---A------TAT-TGTAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAAGGAAGAAT----TTT--AAAATTGTCATAACAGT-AAAAATACAG---TAGAATT----AAGAAT-AAC-AGA---ATGC-ATAtttatgaaaggttgtgccctcctacatttttttatcccagctttatgaaagtttgtgcccccccttgttttagcccagctatgccactgtccggacatgtaaattagcggagggtattatcctcactttttggggttaacattctctgttctttttaaaataccttttcacatggaaagtaagatatatgtgactatggaagggaattgccgccctctggtgatcgaatttgtcagcaaacaattcatccgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgtgacattaaataatgaacgccctctggtgtaataatgagatatggaatgacgaatgcaacaaagcataatagtatttacataaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatataaggaggatgcataaaaatagaaaacttaaattcaatattgtaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaaggaagaattttaaaattgtcataacagtaaaaatacagtagaattaagaataacagaatgcata
gi|30 : aaattattcaatgactttcgaaacgggtgagataaattcagcacgggcgtataacagggggggggggggatctttggaagaaggggcacgtgcaagtgagtttgtgcccctcccactttttaacacataatttcttttaaaatgatcggataagaatgccacgattaaaaatactcatttctaatatgctggttatcagctgtcaaaaatgtatttaacatatttcactgaatccatatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgacaacaatgacgtctattcgaactacatgtatcaagagtctctggaataaaggacctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttaatatctttcattttctacatgtatctcttgttttgcttgtcaattA-GTTAGAATTTTAAGAGAAT-ACA-AGAAGGATGC-ATAGAATTATGG---CGGTGACTCCCTTCC
gi|31 : gtatCAGTCTGATTGAA--CCA--TC-------TCACC-T-----------GACG--ACGA-TGAG-TGA----------AGGAGGGG---C---TCGTTTTAATCAGACTat
gi|32 : AGTCTGATTAAAA-CCA--GCT------------------------GACG--ACGA-TAGG-AGA----------AGGGGG-----C---TTGTTTTAATCAGACT
gi|35 : -----GACG--ACGA-TAGG-AGA----------AGGGG--GG--C---TGGTTTTAATCAGAC
gi|37 : AGTCCGATTAAAA-CCAA-GCCC-T-CTTCTCC-TA---TC-----GCCG--actg
gi|38 : -AGG----------GGGGGGGGG--T---TGGTTTTAACCAGAC
gi|39 : aaaaaaaAATTATGG---CGGTAATTCCCTTCC
gi|4 : ATTCAGCACGGGCGTATAACA----GAGGGGGGTGGGGG----G--------G-------AT---CT--------TTGGA-GAGAA-GG---GGCACGTGCAAG-----TGAG-TTTGTGCCCTCC--ACTTTTTTA-ACACA--------TAATTTTTTTAAAAA-TGATCGGATAAG--A--A-TGCCACGATT--------AAAATACTCATTTCTAAT-ATGCTGGTTATCAGCTGT--CAAAA---TGTATTAA--CATATT-TCatagtaata
gi|4 : aTTC-AATGAA-TATCAATTATT-GTGTAGGTCACACTCGGCTT--AATGACGTGG-----TTTAAAATTT------GA--ACAACAATGACGT-T--ATTCGAACTA-CATGTA-TTC------AAGAGTCTC-TGGAGTA-AAGGCCTCAGTAATAC-GGATCG-TCATCGTATTTG-ATAGGAATCGCTGTGTTAGGCATA--TGCCC-C--TTACTATCTTTC--ATTTTCTACATGTATCTCTTGTTTTGC-TTGTCAATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|4 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAAGCCCA-G----TGGGAACGAAAGGTT--GTGCCCTCCTA-CATTTTTTTATCCCAGCTTTA--GAAAGTTTGTGCCCCCC-----------T-TTTTAGCCCAGCT-ATGCCACTGTCCGGACATGTAAAT-A---GCGG-AGGGTA-TTATCCTCACTTT----TGGGGT------T-AATCATTCTCTGT-CTTTT-A-AAATACCTTTTCAC--------------------ATGGAA-GTAAGATATATGT--GACTATGGAAGGGA-ATTG-----T-GCCCCTCT--GGTGA-TCGAATTTGTCAGCACACAATTCATC-GGGTTATTTT--AAAGGGAGAATTCATTGTAGCA--TGTAGTGCG-CCCTCTGGTGTAA-TT---A---ATACGTATGTTGACATTAAATAATGAAC-CCC-TCTGGTGTAA-TAAT-GAGA-TAG-GG---A-TG--A-CGAATG--CA---A-----CA----------AAAGCTAATTAGTATTTAC--ATA-AAA-AAACAATTC-AA-----ATGTAGAT-CGA---TGAAATGACGCATC---GAAA--T------------G-A--------------------------A--AAT-G-TAAAT-TGAA-A-TGTTAT--GATATAACATGGGA-TTTAAAGACGGCA-T---ATACATGTAGT-----AA-----ATCAAAGTTTAGAAATTA--A-AAAT----ACAAGAAG-GAT-G-CATGGAA-T--------G--A---A-GAATG--TCATGAAGC-AAAATA-GCATTTAG-AATAAAAGTTAGCATTAA-GAATATGA---AGA-GGAATGCAT-----AAAAAT-----AGAA---A-------A----CTTAAAATTC-----A------TAT-T-TAA-CA--TGGAT-TT-AA--------G-GATGT-C--ATGTACTGT-AGC------AAT--T--TAAGA---ATGGAAA------TT-GATATTGACACAA-GTAACA-GGAATTT--AAAA-TGTCAT-AAAGT-AAAAATAC-A-GTTAGAATT----AAGAAT-ACA-AGA---ATGC-ATAtttagaagggggtaagagaaagggaagcccagtgggaacgaaaggttgtgccctcctacatttttttatcccagctttagaaagtttgtgcccccctttttagcccagctatgccactgtccggacatgtaaatagcggagggtattatcctcacttttggggttaatcattctctgtcttttaaaataccttttcacatggaagtaagatatatgtgactatggaagggaattgtgcccctctggtgatcgaatttgtcagcacacaattcatcgggttattttaaagggagaattcattgtagcatgtagtgcgccctctggtgtaattaatacgtatgttgacattaaataatgaacccctctggtgtaataatgagatagggatgacgaatgcaacaaaagctaattagtatttacataaaaaaacaattcaaatgtagatcgatgaaatgacgcatcgaaatgaaaatgtaaattgaaatgttatgatataacatgggatttaaagacggcatatacatgtagtaaatcaaagtttagaaattaaaaatacaagaaggatgcatggaatgaagaatgtcatgaagcaaaatagcatttagaataaaagttagcattaagaatatgaagaggaatgcataaaaatagaaaacttaaaattcatatttaacatggatttaaggatgtcatgtactgtagcaatttaagaatggaaattgatattgacacaagtaacaggaatttaaaatgtcataaagtaaaaatacagttagaattaagaatacaagaatgcatatt
gi|40 : aattcagcacgggcgtataacagaggggggtgggggggatctttggagagaaggggcacgtgcaagtgagtttgtgccctccacttttttaacacataatttttttaaaaatgatcggataagaatgccacgattaaaatactcatttctaatatgctggttatcagctgtcaaaatgtattaacatatttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaatgaatatcaattattgtgtaggtcacactcggcttaatgacgtggtttaaaatttgaacaacaatgacgttattcgaactacatgtattcaagagtctctggagtaaaggcctcagtaatacggatcgtcatcgtatttgataggaatcgctgtgttaggcatatgccccttactatctttcattttctacatgtatctcttgttttgcttgtcaatttttagaagggggtaagagaaaggg----C--AAAATGC-A---A------CAT-TGTAA-CA--TGGAA-TT-AA--------G-Gtt
gi|5 : TTTTAATAAT---CG-T-ATTTCATTTA-AAT-----------TATT-ATCTAAGT--CACT--GCTC--CATGACGTGAAATGCCG-AGAATTTTTTTTTAATTA----AGTGACGTCC--ATTCGAACAATCGGGCA-TTTGAACAAAAGAGTCTC-TGGACTATCGGACCTTTGGAATATAGGATGA-TGACCGTATTTG-TTAAGAATTGCTGTGTTAGGCAT---------------ATCGATCTC--ATTTTC-----A-ATCTCCTA--TTGCTTTGC-TATTCATTCTTACTAAAA-ACA--
gi|5 : GGGA--C---TGGTTTTAATCAGACTG-CA---ATTTTTATGAAAGT--GTG-TGTCCCCCCCCC-T--------TTTATGCCCA-GCTT-T----CTGAAAGTTT--GTGCCCCATCA----TTTTTTAGGTCAGTTcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaatttttatgaaagtgtgtgtcccccccccttttatgcccagctttctgaaagtttgtgccccatcattttttaggtcagttacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|5 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTT-T----ATGAAAGTGT--GTGTCCCCCCC-CCTTTTAT--GCCCAGCTTTC-TGAAAGTTTGTGCCCCAT--------CATT-TTTTAGGTCAGTT-ACGCCACTGTCCAGGCATGACAATTG---GTCG-AGGGGG-TTATCCCCACTTT----ATGGGGG-----T-TATCGTTCACTGTTTTTTTTGTAAATAC------ATGTAAAGTTGGTTATTTTCACATGGAAAGTAAGATGTTGGTGATATTAT----GGAAGAGAAT--CATCGCCC---T--AGTGACT-GAATTTGTCAGCAAAACATTAATCCGGG--TTTTTTGAAAGGGCGCATTCATTGTAGCA--TATAGTGCG-CCCTCTGGTGTAA-T----A---ATG---A----GGCACTAAATGATAAGCGCCC-TCTGGTATAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CA---A-----CA----------AAGCATAATAGGA-TTTAC--ATG-AAA-AA------CGAA-----A-GTAGAT-TGA---TAAA-TGACGAAGC---AAAA--TAG------------------------------------------AAT-G-TAAAT-TGAA-A-TGTTAT--GATATAacgccactgtccaggcatgacaattggtcgagggggttatccccactttatgggggttatcgttcactgttttttttgtaaatacatgtaaagttggttattttcacatggaaagtaagatgttggtgatattatggaagagaatcatcgccctagtgactgaatttgtcagcaaaacattaatccgggttttttgaaagggcgcattcattgtagcatatagtgcgccctctggtgtaataatgaggcactaaatgataagcgccctctggtataataatgtgacattaaataacgaatgcaacaaagcataataggatttacatgaaaaacgaaagtagattgataaatgacgaagcaaaatagaatgtaaattgaaatgttatgatata
gi|6 : ttttaataatcgtatttcatttaaattattatctaagtcactgctccatgacgtgaaatgccgagaatttttttttaattaagtgacgtccattcgaacaatcgggcatttgaacaaaagagtctctggactatcggacctttggaatataggatgatgaccgtatttgttaagaattgctgtgttaggcatatcgatctcattttcaatctcctattgctttgctattcattcttactaaaaacacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggactggttttaatcagactgcaattCTTTT-GTAAATAC------A----------------------TGCAACATTGGGGTTTTTT--TTTTAT--AAGGAA-AGTAA--GAT-GT-----T--GGTGA-T---------TAGCAAAACATTAATCCGGG--ATTTTCGAAACTTAACATTCATTGTAGAA--TATAGTGCA-CCCTCTGATGTAA-T----A---ATG---A----GGCACTAAATGATAAACGCCC-TCTGGTGTAA-TAAT-GTGA-CATTAA---A-TA--A-CGAATG--CA---A-----CA----------A-------------TCTAC--ATGAAAA-AG------C-AA-----A-GCAGAT-CGA---TTAA-TAACGAAGC---AAAA--TAGAA-T-TTA-AG-A----------------------TTACA--AAT-G-TAAAT-TGAA-A-CGTTGT--GATAAAACATGGAA-TTTAAAGATGTCATT---ATA------GT-----AA-----ATTAATGGTTAGAA-TTATTATAAAT----ACAAGGAG-GGT-G-CATGAAA-T--------G--A---A-GAATG--CCGTGAATT-AAAAGA-ACATTTAG-AATAAAAATTAGCATTAA-GAATACAA---GGA-GG-ATGGAT-----AAAAATAAAAAAAAA---A-------A----C--GAAATGC-A---A------CAT-TGTAA-CA--TGGAA-TT-AA--------G-GATGT-C--A-----TGT-AGG------AAA--T--TAGAA---ATGGAGA------TT-GA-AATGACAGACGGTAACATGAGATTT--AAAT-TGTCAT-AAAGT--AAAATACAA-ATTAGAATT----AAGAAT-ACA-AAAAGGATGC-ATATAATCATGA---CGGTGATTCCATTCC
gi|7 : GTAAGTAAT-GCGAACATTAATG-ACTAGTA-CGAATGTGCA---AAAG--CATTAATAAGTGA-------------TTTATCGATG-AAA-GC------G-AA-----A-GATGATACGA---T-AA-TGACGTATCTA-GAGA--TAGAAATATTAGAG-A----------------------TTACAGAAAT-G-TATACATGAATA-TCTTAT--G-TATAA---GGAA-TT-AAAGAT--CA-T---ATG---------------------TC--CGGTTAGAA-TTA--A-AAGTCATTACAAGCATTGATAG-CATG--A-T--------GCAA---A-GAATGGTTCATGAA-C-AAAATAAGAAATTAG-AATAAAGATAAGCAT----AAATACAAAGCAGA-GG-ATGCACAAATAAAAAAT-----AGAA---ATATCTTTG----C---AAATAC-AAACA------CATGTGTAA-CA--TTGAA-TTAAA--------G-AAAGT-C--------TAT-AAG------AAAAGA--TAGAGCCCATGGAGAAATAGTTT-AA-CAT-ACACAA-GTAAAATGGTAATTGAAAAA-TATCAAACAACTAAAAAATAC-A-ATTA-AATT-----AGAAT-ACAGAGAAGAATTC-ATGAATTTATGGAGTCGGTAAT
gi|8 : CGGGCGTATGACGAA-GGAGGGGGGGGGGGGTGAGG--------C-------ATATGCCCTTACAGATTTGA-AAGAA-GGAA-GGGACAT--AGG-----TGGG-TCTGTGGTC-----ATTT------ACATA--------TGA----------A--TGATT--ATAAG--AGAA-TATCATTATTG-----AAAAA-TGCTCACTCCTTTT-ATGCAGGTTCTAGGCTGT--CAAAA---CGT-TGAA--CATATT-TCTCTG-AATCC--ATGCTCAGTATATGTA-TTACCGACTTAATTTTAGCTATTT--CTGGTGCATCCTTACAATTCCTG-TTGTTCCACGCA-TCTAACA-CGGTG-TAAATGAA-GTTTTAATA--A-TCA-T-AGTTCATTTC-AATGAA-TTTCAAATATT-ATCGAAGT--CACT--GCTT--CATGATGTGAAATGTTTTAGAATT-----------A----AGTGAGATCT--ATTCGAACAATCGGGCA-TCTGAACAAAAGAGTTTC-TGGACTATTAGACCTTCGGAATATAGGATGA-TGCCCGTATTTG-ATAGGAATCGCTCTGTTAAGCATG--TACCCACA-TTGATATATCTC--ATTTC-------TATCTCCTA--TTGCTTTGT-AATTcaaccatatccatcacatcgcagctaaacgcattttgttaccctaatattatata
gi|9 : aggcTTT------ACA-A--------TAG----------AA-TG---GAATCAGTTAGAA-TA-AACGATGGTTAAAAAAAAATACTCAGTTCTATT--TGTAGGTTCTCAGCAGTTGCAAAA---T------A--CAAATT-TCT-TG----CA--ATGCACACAATCTGTA-TT
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGTGAGGGTGGGGTATCTATACTTTTTGGGATAACGTTCACTGTTTCTTTTTTTAAACCATTTAAAAGTTAGTATTTTCGCATGCAAGTAAGATATTGG
Unaligned ( gi|33 ): TTTAATCACAATTACGTGAATAATTATTCAATGACTTTCGAAAGGGTGAGATA
Unaligned ( gi|34 ): CTTATTAGCAAAAGTATTTATTGCATACAATGATACTTATATA
Unaligned ( gi|36 ): CTTATTAGCAAAGTATTATTGCATACAATGATACTTATATA