lowQualScore : 3333333333333333333333333
lowQualScore : 11 444 1111111111 111111 11 33333 1 555 2222 5555555555555555555555555 2222 1111 111 1111111 11 111 11 11 111111111 11 111111 111 222 1 2222222222222222 111 1 11111 111 11 111 11 11 11 11 2222222 111111 11111 11111 1111 11 1111 11 11 1111 11111
lowQualScore : 4 44 111 44 6 3 3 7 3 3 7 666 3 3 3 7 0 5555555555 0 6 0 000000 88 3 7 3 3 8 3 3 8 11 4 8 55 3 3 55 55 55 3 666 3 4 555 4 4 4 11111 3 66 66 4 4 4 4 4 777 2 4 4 333 8 4 4 2222 4 5 5 5 66 3333333333333333333333333 7 4 55 4 5555 55 4 99 4 5 4 2222 4 4 777 4 222 55 44 0 1111111 4 4 4 4 99 99 55 7777 4 55 55 4 55 4 111 55 8 4 1 55 4 4 7 55 3 99 666 555555555 3 4 88 4 99 11 4 777777 4 4 9999 4 333 66 66 66 66 4 333 4 66 5 66 5 66 1 5 5 5 0 666 1 0000000000000000 222 5 1 99999 0 555 99 66 00 4 4 4 555 66 55 4 4 66 4 4 66 66 5 5 33 5 5 5 11 5 2 55 0 0 44 4 1 66 1 1111111 66 9999 4 5 000000 4 4 4 55 4 4 777 55555 99999 77777 88 0000 55 88 3 11 1111 3 88 55 3 7 7 55 3 3 3 3 2 3 55 666 55 3 3 555 3 3 3 4 3333 4 7 11111 66
lowQualScore : . .. ... .. . . . . . . . ... . . . . . .......... . . . ...... .. . . . . . . . . .. . . .. . . .. .. .. . ... . . ... . . . ..... . .. .. . . . . . ... . . . ... . . . .... . . . . .. ......................... . . .. . .... .. . .. . . . .... . . ... . ... .. .. . ....... . . . . .. .. .. .... . .. .. . .. . ... .. . . . .. . . . .. . .. ... ......... . . .. . .. .. . ...... . . .... . ... .. .. .. .. . ... . .. . .. . .. . . . . . ... . ................ ... . . ..... . ... .. .. .. . . . ... .. .. . . .. . . .. .. . . .. . . . .. . . .. . . .. . . .. . ....... .. .... . . ...... . . . .. . . ... ..... ..... ..... .. .... .. .. . .. .... . .. .. . . . .. . . . . . . .. ... .. . . ... . . . . .... . . ..... ..
lowQualScore : 4 55 777 66 7 3 3 3 6 6 3 444 6 6 6 3 5 7777777777 1 5 4 555555 77 6 3 6 6 8 5 6 0 00 0 0 55 6 6 99 00 00 6 444 6 0 222 4 4 4 11111 3 11 11 4 4 4 4 4 888 0 4 4 333 9 4 4 2222 4 0 0 0 99 1111111111111111111111111 2 0 55 0 1111 55 0 55 0 7 0 1111 0 0 000 0 555 55 88 8 5555555 0 0 0 0 55 55 55 8888 0 55 99 0 55 0 000 55 0 0 1 55 0 0 3 00 6 99 444 888888888 6 0 44 0 55 00 0 444444 0 0 4444 4 999 11 11 11 33 4 000 4 11 0 99 0 99 4 7 7 7 7 111 7 1111111111111111 444 7 4 44444 9 777 77 99 88 4 4 4 666 88 00 4 4 11 4 4 99 99 0 0 88 0 0 0 99 0 5 11 8 1 77 4 9 11 9 9999999 11 4444 4 7 888888 0 0 0 55 0 0 000 55555 11111 77777 66 9999 00 33 6 88 4444 6 33 00 6 3 3 00 6 6 6 6 0 6 99 444 00 6 6 555 6 6 2 0 0000 0 3 33333 11
consensus : TGCAA-GCTGAATTTTTG-AATA--T--TTAAC-TTT-TTAT-GAAATA-T-GCATTA-AA-TGATA---GAG-GTA-ATA-TA-GGTCCATC--A-T-----TTTTTTGGAAA------AAAAAT-TA-TAGGTCAGTGTT-G-AAAATAAGGA-GTT-ACTGCCCTTGGT--A-GAGAA-GCA--TG-CT-AAA-TACC--TG--AA-AT---TA-TTGCTA-AAA-A-TAG-C-A-CAAA-----TTT-CTGA--TCA--AA-GAAAA-AA-T-GA-GACAG---AATAA-AGA-ATTTG-CATGT-TA-T-TTA--T-ATATC-AGT-ATCA-A-T--AAC-------------------------ATTCAAAAC-AAT--CTTAA-C-AA-G--C-TT--GAA-AATTC-A-A--T-T-TTT---AACA-A---GTA--TTTCAA-ATAGCTAGCA--TT-G-CTTAAA-A-TTT-G-TCA--TTTT--GTT--GC-A--AAA-TTTA--CA-GA-ATTC--AA-CAT---TTT--T-A-GGCCAAAATTCA-G-GGCA-CATT-GAATATTTA--ACTT-TTTTTTC-AGT---CAT--A--G---AT-AA-A-AAT-ATGCT--TA--T-CG--A---A-TCA-GA----TT-TTT---AA--AATATT--GAAAAA--AA-T-AT-A-TAGG-TCAGT--GTT-G--AAATAA-G--AAAG-AAAAAC-GA-G-GTCA-A-ATATTGCC-TA-TT-G-C------TGT-A-AT-GAT-TTT-ATG-GGAAA---AGTACGGG-AA--AACATGTG-A-TT-A---TTTTTN-T--C-GGGTATTT-ACA--ACAT-TGTAACA-AA--TT--TTCA-T-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAA--AT----ACC-ATTATCCAA-----TTTTT-T-A-A--T-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AAAAA----AG-AA-CAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---A--TTT-AGG-AC-A-CC-TT-GAATATTT-AACT-TTTTTTCAA-GCATG-GATA----A--CAATATGTTCT
Reference ( gi|8 ) : TGCAA-GCTGAATTTTTT-AAT---T--TTAAC-TTT-TTAT-GAAATA-T-GCATTA-AA-TGATA---GAG-GTA-ATA-TA-GGTCCATC--A-T-----TTTTTTGGAAA------AAAAAT-TA-TAGGTCAGTGTT-G-AAAATAAGGA-GTT-ACTGCCCTTGGT--A-GAGAA-GCA--TG-CT-AAA-TACC--TG--AA-AT---TA-TTGCTA-AAA-A-TAG-C-A-CAAA-----TTT-CTGA--TCA--AA-GAAAA-AA-T-GA-GACAG---AATAA-AGA-ATT---CATGT-TA-T-TTA--T-ATATC-AGT-ATCA-A-T--AACNNNNNNNNNNNNNNNNNNNNNNNNNATTCAAAAC-AAT--CTTAA-C-AC-G--C-TT--GAA-AATTC-A-A--T-T-TTT---AACA-A---GTA--TTTCAA-ATAGCTAGCA--TT-G-CTTAAA-A-TTT-G-TCA--TTTT--GTT--GC-A--AAA-TTTA--CA-AA-ATTC--AA-CAT---TTT--T-A-GGCCAAAATTTT-G-GGCA-CATT-GAATATTTA--ACTT-TTTTTTT-AGT---CAT--A--G---AT-AA-A-GAT-ATGCT--TA--T-CG--A---A-TCA-GA----TT-TTT---AA--AATATT--GAAAAA--AA-T-AT-T-TAGG-TCAGT--GTT-G--AAATAA-G--AAAG-AAAAAC-GA-G-GTCA-A-ATATTGTCGTA-TT-G-C------TGT-A-AT-GAT-TTT-ATG-GAAAA---AGTACGGG-AA--AACATGTG-A-TT-A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-AA--TT--TTCA-T-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAA--AT----ACC-ATTATCCAA-----TTTTT-T-A-A--T-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-ATGA-TTTTAGTGC-CAAAA----AG-AT-CAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---A--TTT-AGG-AC-A-CC-TT-GAATATTT-ACCT-TTTTTTCAA-GCATG-GATA----A--CAATATGTTCT
gi|7 : TGCAATGCTGAATTTTTG-AATAAAT--TTAACCTTT-TTAT-GAAATAAT-GCATTA-AAATGATA---GAG-GTA-ATA-TATGGTCCATC--A-T-----TTTCT-GGAAA------AAA--T-TAATAGGTCAGTGCT-G-AAA-TAAGGA-GTTTACTACCCTTGGTTAA-GAGAA-GCA--TG-CT-AAAATACC--TG--AA--T---TA-TTGCTA-AAA-A-TAG-C-AACAAAATT--TTT-CAGA--TCA--AA-AAGCACAA-C-GA-GACAG---AA-AA-AGA-ATTTG-CATGG-TA-T-TAT--T-ATATCTAGT-ATCA-A-T--AAC-------------------------ATTCAAAAC-AAT--CTTAA-C-CA-G--C-TT--GAA-AAATC-A-T--T-T-TTA---AACA-AAC-GTT--TTTCAA--TAGCTAGCA--TT-A-CTTAAA-A-TTT-G-TTA--TTTT--GTT--TC-A--AAA-TTTA--CATGA-ATTC--AA-CAT---TTT--T-AGGGCCAAAATCCA-GTGGCA-CATTGGAATATTTA--ATTT-TTTTTTC-AGT---CATGAA--G---AT-AA-A-AAT-A-GCT--TA--T-CG------A-TCA-GA----TT-TTTTAAAA--AATATT--GAAAAAATAA-T-A--A-TAGG-T-AGT--GTT-G--AAATAA-G--AAAG-AAAAAC-GAGG-GTCA-ATATATTGCC-CA-TT-GCC------TGT-A-AT-GATATTTGATG-GGAAA---AGTACGGA-AA--AAC--GTG-A-TT-AATTTTTTTT-T--C-GGGTATTT-ACA--ACAT-TGTAACA-AA--TT--TTTA-T-AATTCC-AA-TTT-CG--AA-TGCATTTAAATATACATAGTATGAT--AA-GGATATCA-----TATAC-----A-AAA--AA----TCC-ATTGTCC-A-----TTTTT-T-A-A--T-G-CTA---TTT-AG-----TTT-----GCAAA--AAATTA-ACATTCA--T-T--TT-GTGA-TTTTAGTGCAAAAAA----AG-AA-CAA--AA-T-TCGTCC--AT-A-GA-CA-GACC-C--A---A---TT-ATG-AC-G-CC-TC--AATA-TT-ACTT-TTTTTCAAA-GCATG-GAT-----A--CAATATTTTCT
gi|6 : TGCAA-GCTGAATTTTTG-AATA--T--TTAAC-TTT-TTATTGAAATA-TTGCACTATAA-TGATAAGTGAG-GTA-ATA-GA-GTTCCATC--AGT-----TTTTCTGGAAA------AAAATT-CA-TAAG-CAGT-TT---AAAATAAGGA-GTT-ACTGCCCTTGGT--A-GAGAAAGCAATTG-CT-AAA-TACC--TGTGAA-AT---TA-TTGCTA-AAA-T-TAG-C-A-CAAAGATTTTTT-CTGA--TCA--AAAGAAAA-AA-T-GA-GACAG---AATAATAGATATTTG-CATGT-TAGTATTA--TTATATC-AGT-ATCA-A-T--AAC-------------------------ATTCAAAAC-AATAATTTAA-C-AA-G--C-TT--GAAGAATTA-A-A--TAT-TTT---AACA-A---GTA--TTTCAATATAGCTAGCAA-TT-G-CTTAAA-A-TTT-GGTCA--TTTT--GTTTGGC-AGAAAA-TTTAATCA-GAGATTC--AAACAT---TTTATT-A-GGCCAACAATTT-A-GGCAATATT-GAATATTTA--ACTT-TTTTTC--AGT---CAT--ATAG---ATCAATA-AATGATGCT--TAAAT-CG--A---A-TCA-GA----TT-TTT---AATAAATATTTGAAAAAA--AA-G-AT-A-TAGG-TCAGTTGGTTTG--AAATAA-G--AAAACAAAAAC-GA-GTGT-A-A-ATATT-TCGTA-TTTG-C------TGT-GTAT-GAT-TTT---G-GAAAATGAAGTACGG---A--AACGT----A-TT-A---TTTT-A-T--C-GGGTATTT-ACATTACATCTGTAAAG-AACATT--TTCAAT-A--TTCGAA-TTT-TGGTAA-TGCATTTAATTATACA-AGTATTATA-AATGGATATCACGCAGTATATACCAGA-AAA--AT----ACC-ATTATCC-A-----TTTTT-T---A--T-GCCTA---TTTCAGTTGTTTTT-----GCAAA--AAATT--ACATTCATTT-T--TT-GTGACTTTTAGTGC-AAAAAC---AG-AA-CAAGTAG-T-TCGT-C--AT-A-AT-CAGGACC-C--G---A--ATT-AGG-AC-AGCCGTTGGAATATTT-ACGT-TTTTTTCAA-GATTGTGATA----AATCAATATGTTCTca
gi|13 : TGCAA-GCTGAATTTTTG-AATA--T--TTAAC-TTT-TTAT-GAAATA-T-GCATTA-AA-TGATA----AG-GTA-ATA-TA-GGTCCATC--A-T-----TTT-TTGG-AA------AAAAAT-TA-TAGGTCAGTGTT-GAAAAATAAGGA-GTT-ACTGCCCTTGGC--A-GAGAA-GCA--TG-CT-AAA-TGCC--TG--AA-ATATGCA-TTCCTA-AAA-tctatcagacatgcttgacaagtggctattcggtttgcgagcgtagaccgctaaaacatctttgcaaaattattatagcctattttaagcggggaataagtggcgcagttatctcgatggaacagtttcc
gi|11 : TGCAA-TCTGAATTTTTG-AATA--T--TTAAC-TTT-TTAT-g
gi|3 : tatttaaggatgaCAA-GCTGAATTTTTG-AATA--T--TTAAC-TTT-TTAT-GAAATA-T-GCATTA-AA-CGATA---GAG-GTA-ATA-TT-GGTCCATC--A-T-----TTTTTagcaagcaaattacattcattttgtgattttagtgccaaaaaggacaaaattcgtcataaatcataccaaaatataggacacattgaatatttaactattttttcaagcgtcgttaagaatatgttcttcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|5 : CAA-GCTGATTTTTTA-AATA--T--CTAAC-TTT-TTAT-GAAATA-T-GCATTA-AA-TGATA---AGA-GTACATA-TA-GGTCACTC----------TTTTCTGGAAA------AAA--T-TA-TAGGTCAGTTTT-G-AAC-TAA--A-GTT-ACTGCCCTTGGT----GAGAAAGCA---G-CT-AAA----C--TG--AACAT---TA-TTGCTA-AAA-A-TAG-C-A-CAAG-----TTTTCTGA--TCA--AA-GGAAA-AA-T-GA-GACAG---A-TAA-AGA-TTTG--CATGT--A-T-CTA--T-AT-TC-AGT-ATCA-A-T--AAC-------------------------ATTCAAAAC-AAT--CTTAA-C-CA-G--C-TT--GAA-A-TTC-ACA--T-T-TTT---AACACA---GTA--TTTCAA--TAGCTAGCA-------CTTATA-A-TTT---TAA--TTTT----T--GC-A--AAA-TTTA--CA-GA-ATTC--AA-CCA---TTT--T-A-GGCCAAAATTA--G-GGCA-CAT---GATATTTA---CTT-TTTTCC---GT---CAT--A--G---AT-AA-A-AAT-ATGCT--TA--TGCG--A---A-T-A-GA----TT-TTT---AA--AATATT--GAAAAA--GA-T-AT-A-TAGG-TCAGT--GTT-G--AAAT-A-G--AAAGAAAAAAC-GA-G-GTCA-A-ATATTGCC-TA-TT-G-C-------GT-A-AT---------------------AGTAC-GG-AA--AACATGTG-G-CT-A---TTTTTA-T--C-----ATCT-TCA--A-A--TGTAACA-AA--TT--TTTA-T-A--TTC-AA-TTT-TG--AA-T-CATTTAATTATACA----GTGATATAA-GAAT-TCA--CAGTATAC--------AA--AT----ACC-A-TATCCAA------TTTT-T-A-A--T-G-CTA---TTTCAG-----TTT-----G--AA--AAA-T--ACATTCA----T--TT-GTGA-TTTTAGTG--CAAAA----AG-AA-AAA--AA-T-TCGT-C--AT-A-AT-CA-GATC-CA-A---A--TTT-AGGAAC-A-CC-TT-GAATA-TT-AACT-TTTTTTCA---CAT--GATA----A--CAGTATGTTCTnnnnnnnnnnnnnnnnnnnnnnnnncatttttttttgaaaaaaaaattataggtcagtgttgaaataaagagttactgcccttggtagagaagcatgctaatacctgaaattattgctaaaaaatagcacaaattttctgatcaaagaaaaaatgagacagaataaagaatttgcatgttatttattatatcagtatcaataacattcaaaacaatcttaaccaggtttgaaattcaatttttaacaagtatttcaaatagctagcattgcttaaaattttgtcatttttgttgcaaaatttacagaattcaacatttttggaccaaaatttagggcacattgaatatttaactttttttcatcatagataaaaatatgcctatcgaataaagattttttaaaaatactgaaaaaatatataggtcagtgttgaaataaagaaagaaaaacgaggtcaaatattgccctattgctgtaatgattttatggaaaaaagtacgggaaaacatgtgattatttttatcaggtatttacaacattgtaacaaattttcatattcaattttgaatgcatttaattatacaagtatgaaaaggatatcacagtatacaaaaataccattatccaattttttaatgctatttcagtttgcaaaattacattcatttgtgattttaagaaaaaaaagaacaaaattcgtcatataacagacccaaatttagaacaccttgaatatttaactttttttcaagcatggataacaatatgttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|4 : AA-GTTGAATTTTTTGAATA--T--TTAAC-TTTGTTAT--AAATA-T-GCATTA-A--TGATA---GAG-GTA-ATACTA-GGTCCATC--A-T-----TTTCT-GGGAA------AAAAAT-TA-TAGGTCAGTGTTTG-AAAATAAGGAAGTT-ACTGCCCTTG-T--A-GAGAA-GCA--TGGCT-AA--TACC--TG--AC-AT---TAAGTGCTATAAA-A-TAGGC-A-AAAT-----TTT-CTGAAATCA--AA-GAAAA-AA-TTGATGATAG---AATAA--GA-ATTTG-CATGT-TA-C-TTA--TTATATC-AGT-ATCA-A-T--AAC-------------------------ATTCAAA-C-AAT--CTTTA-C-AA-G--C-TTT-GAA-AATTC-A-AA-T-TATTT---AACA-ACAAGTA--TTCAAA-ATAGCTAGCA--TT-G-CTTAAA-A-TTT-G-TCA--TTTTTGGTT--GC-A--AAA-TTTA--CA-GA-AT-C--AA-CAT---TTT--TTA-GGC-AAAATTCA-G-GGCA-CATT-GAATATTTATAACTT-TTTTTTC-AGT---CATTTA--G---AT-AA-A-AAT-ACTCT--TA--T-CGCGA---C-TCA-GA----TT-TT----AA--AATATT--GAAAAA--A--T-AT-A-TAG--TCAGT--GT--G--AAATAA-G--AAAG-AAAAGC-GA-G-GTCA-A-ATATTGTCGTA-T--G-C------TGT-ACATCGAT-TTT-TCT-GGAAA---AGTACGGGGAA--AAC-TGTG-A-TT-A---TTTTTA-T--CTGGGTATTTTACA--ACAT-TGTAACA-AA--TT--TTCA-T-A--TTC-AA-TTT-TGA-AA-TGCATTTAATTATACA-AGTATGAT--AA-GGATATCA--CAGTATAC-----A-AAA--AT----A-C-ATTATCCAA------TTTT-T-A-A--T-G-CTA---TTTCAAGT---TTT-----GCAAA--AAATT--ACA-TCA--T-T--TT-GTGA-TTTTAGTGC-CAAAA----AG-AA-CAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---A--TTT-TTG-AC-A-CC-TT-GAATAGTTAACTT-TTTTTTCAACGCATG-Gtcatatcaaccattagttacgtgctaaccgtttttcggagcgtagaccctaaatacattgcaaatatattacgcctctcattttagcggggaaaagtgcagcgatgtgaacagttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|1 : AA-GCTGAATTTTTG-AATAAAT--TTAACCTTT-TTAT-GAAATAAT-GCATTA-AAATGATA---GAG-GTA-ATA-TATGGTCCATC--A-T-----TTTCT-GGAAA------AAA--T-TAATAGGTCAGTGCT-G-AAA-TAAGGA-GTTTACTACCCTTGGTTAA-GAGAA-GCA--TG-CTAAAA-TACC--TG---A-AT---TA-TTGCTA-AAA-A-TAG-CAA-CAAAATT--TTT-CAGA--TCA--AA-GAAGA-CA-A-GA-GAAAGAATAATAA-AGA-ACTTTGCATGGATA-T-ATAT-T-ATATC-AGT-ATCA-A-T--AAC-------------------------ATTCAAAACTAAT--CTTAA-C-CA-G--CATT--GAA-AAATC-A-ATTT-T-TTT---AACA-A---GTT--CTTTCA-ATAGCTAGCAATTT-A-CTTAAA-A-TTT-G-TTATTTTTT--GTT--TC-C--AAA-TTTA--CATGA-ATTCAAAA-CATC--TTT--T-A-GGCCAAAA-TCA-G-GGCA-CATTGGAATATTTA--ATTTATTTTTTC-AGT---CAT--A--GATAAT-AA-A-AAT-ATGCTC-TA--T-CG--A---A-TCA-GA----TTATTT---AA--AATATT--GAAAAA--AA-TAAT-TATAGGATAAGT--GTT-G--AAATAA-GAAAAAG-AAAAAC-GA-G-GTCATT-ATA-TGCCCCATTT-GCC------TGCAA-AT-GATATTT-ATG-GGAAA---AGTACGGA-AA--AACA-GTG-ATTT-AATTTTTTTT-T--C-GGGTATTT-ACA--ACAT-TGTAACACAA--TT--TTTA-T-AATTCC-AA-TTT-CG--AA-T-CATTTAATATTACA-AGTATGATT-AA-GGAT-TCA--TCATATACA----A-AAA--AT----ACC-ATTGTCCAA-----TTTTT-T-A-A--T-G-CTAAATTCTCAG-----TTT-----GC-AAACAAATTTAACATTCA--T-TAATT-GTGA-ATTTGG----CAAAATAAGAG-AA-CAA--AATT-TCGTCC--AT-A-AC----GA-C-C--A---A--TT---AG-AC-G-CC-TT-CAATATTA-AC---TTTTTTCAA-GCATGAGATATACCA--TATTATGTTCcctaaccaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaggggcgcgtcgatggtgaacgttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtt
gi|2 : A-GCTGAATTTTTG-AATA--T--TTAAC-TTT-TTAT-GAAATA-T-GCATTA-AA-TGATA---GAAAGTA--TA-TA-GGTC-ATC----------TTTTTTG--AA------AAAAAT-TA-TAGGTCCATGTT-G-AAAATAAGGA-GTT-ACTGCCCTTGGC--AAGAGAA-GCA--TA-CT-AAA-TGCC--TG--AA-AT---CA-TTGCTA-AAA-A-T-G-C-A-CAAA-----TTTTCTGA--TCA--AA-GAAAA-AAAT-GA-GACAG---AAAAA-AGA-ATTTG-CATGC-TA-T-CTAGTT-ATATC-AGTTATCA-AAT--AAC-------------------------ATTCAA--C-AAT--CTTAAAT-ACAG--C-TTTTGAA-AATTCCA-A--T-T-TTT---AACA-A---ATA--TCTAAA-ATAGATAGCA--TTAG-CTTAAACA-TTT-G-TCAA-TTTT--GTT--GC-A--AAAATTTA--CA-GA-ATTC--AA-CAT---TTT--T-A-GGCCAAAAATTTAG-GGCA-CATT-GAATATTTA-----C-TTTTTTC-AGT---CAT--A------AT-AA-A-AAT-ATACT--TAAAT-CG--A---AATCA-GAATTTTT-TTT---TA--AATATT--GAAAAA--AAAT-AT-A-TAGG-TCAGT--GTT-G--AAATAA-G--AAAG-AAAAACGGA-G-GTGA-A-ATATTGCC-T--TT-G-CGAAGTATGT-G-AA-AAT-TTTAATGCAAAAA---AGTACGGA-AATTACTATGTGTA-TT-A---TTTTTC-TG-C-GGGTATTT-ACA--ACAT-TGTAACA-AA--TTTGTTCA-T-T--CTC-AA-TTT-TG--AA-TGCATTTAATTAT----------ATA-AA-GGA-ATCA--CAGAATAC-----AGAAA--AT----ACC-ATTATCCAA-----TTTTTGTGA-A--T-G-CTA---TTTCAG-----TTT-----GCAAA--AAATT--ACATTCA--T-T--TTAATGA-TTTTAGTGC-AGAAA----AG-AA-CAA--AA-TGTCGT-C--AT-A-AT-CA-GAAC-CAAA---A--TTTAAGG-ATAA-TC-TT-GAATATTT-AACT-TTTTTTCAA-GCATG-GAT-----A--CATTATGTTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaatgcgcaagtcaaatgtgaacagttcctttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctac
gi|10 : gcTGAATTTTTG-AATA--T--TTAAC-TGT-TTAT-GAAATA-T-GCATTA-AA-TGATA---GGG-GTA-ATA-TA-GATCCATC--A-T-----TTCCTGGGAAA------AAAA---TA-TAGGTCAATGTT-G-AAAATAAAGA-GTT-ACTGCCCTTGGT--A-GAGAA-GCA--TG-CT-AAA-TGTC--TG--AA-AT---TA-TTGCTA-AAA-T-TAG-C-A-CAAAT----TTT-CTGA--TCA--GA-GAAAA-AA-T-GA-GACAG---AATAA-ATA-ATTTG-CATGT-TT-T-TTAT-T-GTA-A-AGT-ATCACA-TTCAAAACAATCTGAACCAGCATGAAACTTTATT---------T--TTTAA-C-AT-GTAT-TT--GAA-A----------------T---AGC-------TA--T----A-AT-----------T-A-CTTGAA-A-TTT-G-TCA--TTTT--GTT--GC-A--AAA-TTTA--CA-GA-ATTC--AA-CAT---TTT--TAA-GGCCAAAATTTA-G-GGCA-CATT-GAATATTCA--AC---TTTTTTC-AGT---CAT--A--G---AT-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaaatggcgcagtttgatgtgaaagagttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc
gi|14 : TTTT-GAT---TATTCAAC-TTT-TCAA-TAAATA-T-GCATCA-AA-TGATA---GAG-GTA-ATA-TA-GGTTAATT--A-------TTTTCTGAGAA------AAAAAT-CA-TAAGTCAGAGTT-A-AAAAGAA--A-GTT-ACTGCTCTTGGT--A-GAGAA-GCA--TG-CT-AAA-TGTC--TG--AA-AT---TA-TTg
gi|3 : TTG-AATA--T--TTAAC-TTT-TT----------T-TCATCA-TA--GATA---AA----A-ATA-T---GCCTATCGAA-TAAAGATTTTTTAAAAATACTGAAAAAATATA-TAGGTCAGTGTT-G--AAATAAAGA-ttta
gi|3 : caagctgaatttttgaatatttaactttttatgaaatatgcattaaacgatagaggtaatattggtccatcattttttnnnnnnnnnnnnnnnnnnnnnnnnncatttttttttgaaaaaaaaattataggtcagtgttgaaataaagagttactgcccttggtagagaagcatgctaatacctgaaattattgctaaaaaatagcacaaattttctgatcaaagaaaaaatgagacagaataaagaatttgcatgttatttattatatcagtatcaataacattcaaaacaatcttaaccaggtttgaaattcaatttttaacaagtatttcaaatagctagcattgcttaaaattttgtcatttttgttgcaaaatttacagaattcaacatttttggaccaaaatttagggcaca-T-----TTTTTTGAAAA------AAAAAT-TA-TAGGTCAGTGTT-G-AAA-TAAAGA-GTT-ACTGCCCTTGGT--A-GAGAA-GCA--TG-CT-AA--TACC--TG--AA-AT---TA-TTGCTA-AAA-AATAG-C-A-CAAA-----TTTTCTGA--TCA--AA-GAAAA-AA-T-GA-GACAG---AATAA-AGA-ATTTG-CATGT-TA-T-TTA--TTATATC-AGT-ATCA-A-T--AAC-------------------------ATTCAAAAC-AAT--CTTAA-CCAG-G--T-TT--GAA-A-TTC-A-A--T-T-TTT---AACA-A---GTA--TTTCAA-ATAGCTAGCA--TT-G-CTTAAA-A-TTTTG-TCA--TTTTT-GTT--GC-A--AAA-TTTA--CA-GA-ATTC--AA-CAT---TTT--T-G-GACCAAAATTTA-G-GGCA-CATT-GAATATTTA--ACTT-TTTTTC---AT---CAT--A--G---AT-AA-A-AAT-ATGCC--TA--T-CG--A---A-TAAAGA----TT-TTTTA-AA--AATACT--GAAAAA--A--T-AT-A-TAGG-TCAGT--GTT-G--AAATAAAG--AAAG-AAAAAC-GA-G-GTCA-A-ATATTGCCCTA-TT-G-C------TGT-A-AT-GAT-TTT-ATG-GAAAAA--AGTACGGG-AA--AACATGTG-A-TT-A---TTTTTA-T--C-AGGTATTT-ACA--ACAT-TGTAACA-AA--TT--TTCA-T-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGA-A-AA-GGATATCA--CAGTATAC-----A-AAA--AT----ACC-ATTATCCAA-----TTTTT-T-A-A--T-G-CTA---TTTCAG-----TTT-----GC--A--AAATT--ACATTCA----T--TT-GTGA-TTTTAAGAA-AAAAA----AG-AA-CAA--AA-T-TCGT-C--AT-ATAA-CA-GACC-CA-A---A--TTT-AGA-AC-A-CC-TT-GAATATTT-AACT-TTTTTTCAA-GCATG-GATA----A--CAATATGTTCaagaaaaacgaggtcaaatattgccctattgctgtaatgattttatggaaaaaagtacgggaaaacatgtgattatttttatcaggtatttacaacattgtaacaaattttcatattcaattttgaatgcatttaattatacaagtatgaaaaggatatcacagtatacaaaaataccattatccaattttttaatgctatttcagtttgcaaaattacattcatttgtgattttaagaaaaaaaagaacaaaattcgtcatataacagacccaaatttagaacaccttgaatatttaactttttttcaagcatggataacaatatgttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|15 : caagctgaatttttgaatatttaactttttatgaaatatgcattaaacgatagaggtaatattggtccatcattttttnnnnnnnnnnnnnnnnnnnnnnnnncattG-CA-AAT-TACCACTG--AA-AT----A-TTCCTA-AAATA-TAG-C-A-CAAA-----GT---TGA--TCAAGAA-GAACA-AA-T-GA-GACA-------AA-AAA-ATTG--CATTTATA-T-TTA--A-ATATC-Annnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|9 : ATTCAAA-C-AAT--CTTAA-C-CA-G--C-TT--GAA-AATTC-A-T--T-G-TTC---AACA-A---GTAATTTTCAA-ATA-CGAGCA--TT-GACTTAAA-AGTCT-G-TT---CTGT--GTT--GC------A-TTTA--CA----------AG-TAT---TTT--T-T-GT----AATTCT-A-GGC--CTTC-G----TTTT--ACTT-TTCTTTCGAGT---CAT--A--G------AA-A-AAT-ATGCT--TA--T-CG------A-TCA-GA----TT-TTT---AA--AATATT--GAAAGA--AA-T-ATAA-TAGG-TCAGT--G
gi|11 : aatcataacC-AAT--CTGAA-T----T--T-TT--GAA-TATTT-A-A--C-T-TTTTATAGCA-A---G-------CAA-AT---TA-CA--TT---CAT------TTT-G-TGA--TTTT--AGT--GCCA--AAA-AGGA--CA-AA-ATTC--GT-CATAAATCA--T-A---CCAAAATATA-G-GACA-CATT-GAATATTTA--ACTA-TTTTTTC-AAG---CGT--C--G---TT-AA-G-AAT-ATGTT--CT--T-CA--T---A-TCA-Gatctcgataaggccagggtctatctgccctagttgcgtatgtcggatgtggtttatttttaatggcgggtatttacaacttgtacttatcattattcaaatttatgaaatgcatttaattatacaagttagtaggacatcacagttataaataccaattatccttttttatatcgtcatttcagtttgttcttatatttgtgattttagtgcaaaaaagaaacaaaatatagtataatcccgatctaaatattcgagacccttgtatattcatttttttcaggcatggataacaatatgttc
gi|13 : tatttaaggatgatgTT-GAATATTTA--ACTT-TTTATGA-AATATGCAT----------T-AA-ATGAT-AAGGTAATA--T-AG--GTCCA-TCA-------TT-TTT-----------TG--GAAAAA--AA-T--T-A-TAGG-TCAGT--GTT-GAAAAATAA-G--GAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|18 : tgcaagctgaatttA--AAC--GTG-A-TT-A---TTTTTT-TT-C-GGGTATTT-ACA--ACAT-TGTAACA-Agttactgcccttggcagagaagcatgctaaatgcctgaaatatgcattcctaaaag
gi|9 : ATGTG-G-TTTA---TTTTTAATGGC-GGGTATTT-ACA--AC-T-TGTA-C------TT--ATCA-TTA--TTC-AAATTTATG--AAATGCATTTAATTATACA-AGT-TAGT---A-GGACATCA--CAGT-TAT--------AA--AT----ACCAATTATCC-------TTTTT-T-ATA--TCG-TCA---TTTCAG-----TTT-----G---------TT-----CTTA--TAT--TT-GTGA-TTTTAGTGC-AAAAA----AGAAA-CAA--AA-TATAGT----AT-A-ATCCC-GATC-T--AAATA--TTC-GAG-AC---CC-TT-GTATATTC-A--T-TTTTTTCAG-GCATG-GATA----A--CAATATGTTC
gi|10 : aatcataacattcaaacaatcttaaccagcttgaaaattcattgttcaacaagtaattttcaaatacgagcattgacttaaaagtctgttctgtgttgcatttacaagtattttttgtaattctaggccttcgttttacttttctttcgagtcatagaaaaatatgcttatcgatcagatttttaaaatattgaaagaaatataataggtcagtgatctcgataaggccagggtctatctgccctagttgcgtatgtcggTATTGTA-AA-G--TATCA--CATT---C-----A-AAACAATCTGAACC-AGCATGAAACTTTATTTTT-T-A-ACAT-G--TA---TTTGAA-----ATA-----GC-TA--TAATT--ACTTGAA--A-T--TT-GTCA-TTTTGTTGC---AAA----AT-TTACAG--AA-T-TCAA-C--AT-T-TT-TA-AGGC-C--A---AAATTT-AGG-GC-A-CA-TT-GAATATTC-AAC--TTTTTTCAG-TCATA-GAT
gi|11 : tgaatttttgaatatttaactgtttatgaaatatgcattaaatgataggggtaatatagatccatcatttcctgggaaaaaaatataggtcaatgttgaaaataaagagttactgcccttggtagagaagcatgctaaatgtctgaaattattgctaaaattagcacaaattttctgatcagagaaaaaatgagacagaataaataatttgcatgtttttAA-----TTTTT-G-A-A--T-----A---TTTAAC-----TTTTTATAGC-AAGCAAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-CAAAA----AG-GA-CAA--AA-T-TCGT-C--ATAA-AT-CA-TACCAA--A---A--TAT-AGG-AC-A-CA-TT-GAATATTT-AACTATTTTTTCAA-GCGTC-GTTA----A--GAATATGTTCTg
gi|16 : tatttaaggatgatgcaatctgT-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAAAGC-AAAAA----AG-AA-CAA--AA-T-TCGT-CATAT-A-AT-CA-GACC-CA-A---A--TTT-AGA-AC-A-CC-TT-GAtcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|17 : ATG-GATA----A--CAATATGTTCT
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|12 ): ACGGATTGTTAATGTGTAGATTGTTATATCAATTGTGATCTTGTGAAAAAAATCGTTATCAAAAGATACCTCCACTGCTATTGCATAGATTCCGCGAATATTTCTAAAGCCTCTTGTGGTTTGTAGATTTAAATCCAATGCTCTTATTTTGTTTTACACGTCCATTATCCTCTTCGAAACTCATCGGCGACGTATAATTGACAGAATGGGTACCGAGGTTACGTTCCGTGCGCAACTAGTCAAAAACAATGACCAGTCACAC
Alignments
lowQualScore : 1 11111111 11 22222 1 111 1111 4444444444444444444444444 111 11 1111111 11 111 11 111 111 1 1 1 111111 1 1 111 11 11 11 11 1111111 11111 11111 11
lowQualScore : 4 3 99 6 3 3 0 3 7 666 3 3 3 7 77 22222222 88 6 555 3 3 7 1 44 3 555 6 3 33 3 3 55 3 88 99 3 555 3 3 3 4 4 8 88888 2 55 4 55 4 4 4 4 3 111 666 8 4 4 9999 4 4 4 0 0000000000000000000000000 0 4 55 4 99 99 4 4 4 666 4 4 55 4 222 55 44 4 55 555 4 4 8 4 55 55 99 55 8 4 4 55 4 55 8 4 4 4 3 4 4 4 0000000 4 55 11 4 222 4 4 22 4 222 4 9999 4 333 66 66 4 66 1 7777 4 4 66 5 66 0 5 5 5 0 5 5 5 5 999999 0 5 5 0 000 5 1 888 5 77 66 77 4 99 777 55 99 4 4 55 4 4 55 66 4 4 22 4 4 4 00 4 1 4 0 44 4 1 66 7777777 4 4 5 0 4 4 4 4 4 777 55555 99999 55555 88 8888 55 3 3 55 3 3 3 55 3 7 7 55 3 3 3 3 3 55 666 3 3 555 3 3 3 0 4 4 4 4 7 99999 55
lowQualScore : . . .. . . . . . . ... . . . . .. ........ .. . ... . . . . .. . ... . . .. . . .. . .. .. . ... . . . . . . ..... . .. . .. . . . . . ... ... . . . .... . . . . ......................... . . .. . .. .. . . . ... . . .. . ... .. .. . .. ... . . . . .. .. .. .. . . . .. . .. . . . . . . . . ....... . .. .. . ... . . .. . ... . .... . ... .. .. . .. . .... . . .. . .. . . . . . . . . . ...... . . . . ... . . ... . .. .. .. . .. ... .. .. . . .. . . .. .. . . .. . . . .. . . . . .. . . .. ....... . . . . . . . . . ... ..... ..... ..... .. .... .. . . .. . . . .. . . . .. . . . . . .. ... . . ... . . . . . . . . . ..... ..
lowQualScore : 0 3 22 7 3 3 9 6 3 444 6 6 6 3 33 66666666 77 7 888 3 3 3 0 66 3 888 7 3 66 6 6 00 3 00 22 3 888 3 6 6 0 0 0 00000 0 55 0 55 0 0 0 0 4 000 333 0 0 0 1111 0 4 0 8 0000000000000000000000000 8 0 55 0 44 55 0 0 0 888 0 0 55 0 555 55 88 0 55 333 0 0 0 0 00 55 55 55 0 0 0 55 0 55 0 0 0 0 0 0 0 0 5555555 0 55 00 0 222 4 4 22 4 444 4 4444 4 999 11 11 4 11 9 0000 4 4 11 0 99 0 0 0 0 0 0 0 0 0 444444 0 0 0 0 444 0 1 888 0 22 11 99 0 55 000 00 00 0 0 55 0 0 55 11 4 4 22 4 4 4 66 4 1 4 8 77 4 9 11 4444444 4 4 7 8 0 0 0 0 0 000 55555 11111 44444 66 5555 00 6 6 66 6 6 6 00 6 3 3 00 6 6 6 6 6 99 444 6 6 555 6 6 2 7 0 0 0 0 3 33333 55
consensus : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA--TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTT-AACC-AGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-ATTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTA--ACTT-TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AATCA-GA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAATAA-GAAA--G-AAAAAC-GA-G-GTCAA-ATATTGCC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-GGAA---AA-GTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
Reference ( family-5196 ) : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA--T-ATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTT-AACA-AGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-ATTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTA--ACTT-TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AATCA-GA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAATAA-GAAA--G-AAAAAC-GA-G-GTCAA-ATATTGCC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-GGAA---AA-GTACGGG-AA--AACATGTG-ATT--A---TTTTTN-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
gi|1 : AA-GCTGAATTTTT-GAATAAATTTAACCTTT-TTA-TGAAATAATGCATTA-AAATGATA---G-AGGTA-ATA-TATGGTCCATCA--TTTTC------T-GGAAAAAA--TTAATAGGTCAGTG---CT-G-AAA-TAAGG--A-G---TTTA-CTACCCTTGGTTAAGAG-AA-GCA--TG-CTAAAATACC--TGAA--T---TA-TTGCTA-AAA-A-TAG-CAACAAAATT--TTT-CAGA--TC-A--AAG-AAGA-CAA-GA-GAAAGAATAATAAAGA-ACTTTGCATGGATA-T-ATA--TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAACTAAT--CTT-AACC-AGCA-TT-GAA-AAAT-CA-A-T-T-TTTTTAACA-A---GTT--CTTTCA-ATAGCTAGC-AATTT-A-CTTAAA-A-TTT-GTT-ATTTTTTGTT--TC--CAAATTTA--CATGA-ATTC-AAAACATCTT--TT-A-GGCC-AA-AAT-CAG-GGCACATT-GGAATATTTA--ATTTATTTTTTC-AGTC--AT--AGAT-AATAAAAAT-ATGCTCT--AT-CG--AATCA-GA----TTATTT---A--AAATATT--G-AAAAA--AATAATT-ATAGGATAAG-TG--TTGAAATAA-GAAAAAG-AAAAAC-GA-G-GTCATTATATGCCC-CA-TTTG-CC-----TGCA-AAT-GATATTT-ATG-GGAA---AA-GTACGGA-AA--AACA-GTG-ATTTAA---TTTTTT-TTTC-GGGTATTT-ACA--ACAT-TGTAACACA--ATT--TTT-AT-AATTCC-AA-TTT-CG--AA-T-CATTTAATATTACA-AGTATGATT-AA-GGAT-TCA--TCATATAC-----A-AAAAATACC-ATTGTCCAATTTTT-T-A-AT-G-CTAAATTCTCAG-----TTT-----GC-AAACAAATTTAACATTCA--T-TAATT-GTGA-ATTTGGCAA-AATAAG-AG-AACAA--AATT-TCGTCC--AT-A-AC----GA-C-C--A---ATT---AG-AC-G-CC-TT-CAATA-TTAAC---TTTTTTC-AA-GCATGAGATATACCA--TATTATGTTC
gi|10 : TGAATTTTT-GAATA--TTTAAC-TGT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-GGGTA-ATA-TA-GATCCATCA--TTTCC------TGGGAAAAAAA--TA-TAGGTCAATG---TT-G-AAAATAAAG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TGTC--TGAA-AT---TA-TTGCTA-AAA-T-TAG-CA-CAAA-----TTTTCTGA--TC-A--GAG-AAAA-AAT-GA-GACAGAATAA---ATA-A-TTTGCATGT-TT-T-TTA--TTGTA-A-AG-TATC-A----C-------------------------ATTCAAAAC-AAT--CTG-AACC-AGC--AT-GAA-ACTT-TA-T-T-T-TTT--AACA-T---GTA--TTTGAA-ATAGCTATA-A--TT-A-CTTGAA-A-TTT-GTC-ATTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TTAA-GGCC-AA-AATTTAG-GGCACATT-G-AATATTCA--AC---TTTTTTC-AGTC--AT--AGAT-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaatgcgcaagtcaaatgtgaacagttcctttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctac
gi|11 : TGCAA-TCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-Tg
gi|11 : tatttaaggatgaAATTTTT-G-A-AT-----A---TTTAAC-----TTTTTATAGC-AAGCAAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-CA-AAA-AG-GACAA--AA-T-TCGT-C--ATAA-AT-CA-TACCAA--A---ATAT-AGG-AC-A-CA-TT-GAATATTTAAC-TATTTTTTC-AA-GCGTC-GTTA----A--GAATATGTTCTagcaagcaaattacattcattttgtgattttagtgccaaaaaggacaaaattcgtcataaatcataccaaaatataggacacattgaatatttaactattttttcaagcgtcgttaagaatatgttcttcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|13 : tatttaaggatgatgcaatctgTGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA-----AGGTA-ATA-TA-GGTCCATCA--TTTTT------T--GGAAAAAAATTA-TAGGTCAGTG---TT-GAAAAATAAGG--A-G---TT-A-CTGCCCTTGGC--AGAG-AA-GCA--TG-CTAAA-TGCC--TGAA-ATATGCA-TTCCTA-AAA-tcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|14 : TTTT-GATTA--TTCAAC-TTT-TCA-ATAAATA-TGCATCA-AA-TGATA---G-AGGTA-ATA-TA-GGTTAATTA---TTTT------CTGAGAAAAAAATCA-TAAGTCAGAG---TT-A-AAAAGAA----A-G---TT-A-CTGCTCTTGGT--AGAG-AA-GCA--TG-CTAAA-TGTC--TGAA-AT---TA-TTg
gi|15 : G-CAAAT-TACCACTGAA-AT----A-TTCCTA-AAATA-TAG-CA-CAAA-----GT---TGA--TC-AAGAAG-AACA-AAT-GA-GACAAAA-AA---A------TTGCATTTATA-T-TTA--A-ATATC-Attta
gi|16 : T-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAAAGC-AA-AAA-AG-AACAA--AA-T-TCGT-CATAT-A-AT-CA-GACC-CA-A---ATTT-AGA-AC-A-CC-TT-GA
gi|17 : ATG-GATA----A--CAATATGTTCT
gi|18 : A--AAC--GTG-ATT--A---TTTTTT-TT-C-GGGTATTT-ACA--ACAT-TGTAACA-A--tcatatcagacatgttgacagtgctaccgtttctgcgagcg
gi|2 : A-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---GAAAGT--ATA-TA-GGT-CATC----TTTT------TTG--AAAAAAATTA-TAGGTCCATG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGCA-AGAG-AA-GCA--TA-CTAAA-TGCC--TGAA-AT---CA-TTGCTA-AAA-A-T-G-CA-CAAAT----TTT-CTGA--TC-A--AAGAAAAA-AAT-GA-GACAGAAAAA---AGA-A-TTTGCATGC-TA-T-CTAGTT-ATATC-AGTTATCAAATAAC-------------------------ATTC--AAC-AAT--CTTAAATACAGCTTTT-GAA-AATTCCA-A-T-T-TTT--AACA-A---ATA--TCTAAA-ATAGATAGC-A--TTAG-CTTAAACA-TTT-GTCAATTTT--GTT--GCA-AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCCAAA-AATTTAG-GGCACATT-G-AATATTTA-----C-TTTTTTC-AGTC--AT--A-AT-AA---AAAT-ATACT-TAAAT-CGA-AATCA-GAATTTTT-TTT---T--AAATATT--GAAAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAATAA-GAAA--G-AAAAACGGA-G-GTGAA-ATATTGCC-T--TT-G-CGAAGTATGTG-A-A-AAT-TTTAATGCAAAA---AA-GTACGGA-AATTACTATGTGTATT--A---TTTTTC-TG-C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATTTGTTC-AT-T--CTC-AA-TTT-TG--AA-TGCATTTAATTAT----------ATA-AA-GGA-ATCA--CAGAATAC-----AGAAAA-TACC-ATTATCCAATTTTTGTGA-AT-G-CTA---TTTCAG-----TTT-----GCAAA--AAATT--ACATTCA--T-T--TTAATGA-TTTTAGTGC-AG-AAA-AG-AACAA--AA-TGTCGT-C--AT-A-AT-CA-GAAC-CAAA---ATTTAAGG-ATAA-TC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GAT-----A--CATTATGTTC
gi|3 : gcCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-CGATA---G-AGGTA-ATA-TT-GGTCCATCA--TTTTT------Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaaatggcgcagtttgatgtgaaagagttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc
gi|3 : --TTTTT------TTGAAAAAAAAATTA-TAGGTCAGTG---TT-G-AAA-TAAAG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAA--TACC--TGAA-AT---TA-TTGCTA-AAA-AATAG-CA-CAAA-----TTTTCTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA--TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTT-AACC-AGG--TT-TGA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTTTGTC-ATTTTT-GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-G-GACC-AA-AATTTAG-GGCACATT-G-AATATTTA--ACTT-TTTTT-C-A-TC--AT--AGAT-AA---AAAT-ATGCC-T--AT-CG--AATAAAGA----TT-TTTTA-A--AAATACT--G-AAAAA--A-TA--T-ATAGG-TCAG-TG--TTGAAATAAAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTGCCCTA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-GAAA---AAAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-AGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGA-A-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC--A--AAATT--ACATTCA----T--TT-GTGA-TTTTAAGAA-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-ATAA-CA-GACC-CA-A---ATTT-AGA-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCnnnnnnnnnnnnnnnnnnnnnnnnncatttttttttgaaaaaaaaattataggtcagtgttgaaataaagagttactgcccttggtagagaagcatgctaatacctgaaattattgctaaaaaatagcacaaattttctgatcaaagaaaaaatgagacagaataaagaatttgcatgttatttattatatcagtatcaataacattcaaaacaatcttaaccaggtttgaaattcaatttttaacaagtatttcaaatagctagcattgcttaaaattttgtcatttttgttgcaaaatttacagaattcaacatttttggaccaaaatttagggcacattgaatatttaactttttttcatcatagataaaaatatgcctatcgaataaagattttttaaaaatactgaaaaaatatataggtcagtgttgaaataaagaaagaaaaacgaggtcaaatattgccctattgctgtaatgattttatggaaaaaagtacgggaaaacatgtgattatttttatcaggtatttacaacattgtaacaaattttcatattcaattttgaatgcatttaattatacaagtatgaaaaggatatcacagtatacaaaaataccattatccaattttttaatgctatttcagtttgcaaaattacattcatttgtgattttaagaaaaaaaagaacaaaattcgtcatataacagacccaaatttagaacaccttgaatatttaactttttttcaagcatggataacaatatgttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|4 : caagctgaatttttgaatatttaactttttatgaaatatgcattaaacgatagaggtaatattggtccatcattttttnnnnnnnnnnnnnnnnnnnnnnnnncattAA-GTTGAATTTTTTGAATA--TTTAAC-TTTGTTA-T-AAATA-TGCATTA-A--TGATA---G-AGGTA-ATACTA-GGTCCATCA--TTTTC------T-GGGAAAAAAATTA-TAGGTCAGTG---TTTG-AAAATAAGG--AAG---TT-A-CTGCCCTTG-T--AGAG-AA-GCA--TGGCTAA--TACC--TGAC-AT---TAAGTGCTATAAA-A-TAGGCA-AAAT-----TTT-CTGAAATC-A--AAG-AAAA-AATTGATGATAGAATAA----GA-A-TTTGCATGT-TA-C-TTA--TTATATC-AG-TATC-AATAAC-------------------------ATTCAAA-C-AAT--CTT-TACA-AGC--TTTGAA-AATT-CA-AAT-TATTT--AACA-ACAAGTA--TTCAAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-ATTTTTGGTT--GC--AAAATTTA--CA-GA-AT-C-AA--CAT-TT--TTTA-GGC--AA-AATTCAG-GGCACATT-G-AATATTTATAACTT-TTTTTTC-AGTC--ATTTAGAT-AA---AAAT-ACTCT-T--AT-CGCGACTCA-GA----TT-TT----A--AAATATT--G-AAAAA--A-TA--T-ATAG--TCAG-TG--T-GAAATAA-GAAA--G-AAAAGC-GA-G-GTCAA-ATATTGTCGTA-T--G-C------TGTACA-TCGAT-TTT-TCT-GGAA---AA-GTACGGGGAA--AAC-TGTG-ATT--A---TTTTTA-T--CTGGGTATTTTACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TGA-AA-TGCATTTAATTATACA-AGTATGAT--AA-GGATATCA--CAGTATAC-----A-AAAA-TA-C-ATTATCCAA-TTTT-T-A-AT-G-CTA---TTTCAAGT---TTT-----GCAAA--AAATT--ACA-TCA--T-T--TT-GTGA-TTTTAGTGC-CA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-TTG-AC-A-CC-TT-GAATAGTTAACTT-TTTTTTC-AACGCATG-Gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|5 : CAA-GCTGATTTTTT-AAATA--TCTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---A-GAGTACATA-TA-GGTCACTC----TTTT------CTGGAAAAAA--TTA-TAGGTCAGTT---TT-G-AAC-TAA----A-G---TT-A-CTGCCCTTGGT---GAG-AAAGCA---G-CTAAA----C--TGAACAT---TA-TTGCTA-AAA-A-TAG-CA-CAAG-----TTTTCTGA--TC-A--AAG-GAAA-AAT-GA-GACAGA-TAA---AGA---TTTGCATGT--A-T-CTA--T-AT-TC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTT-AACC-AGC--TT-GAA-A-TT-CACA-T-T-TTT--AACACA---GTA--TTTCAA--TAGCTAGC-A-------CTTATA-A-TTT--TA-ATTTT----T--GC--AAAATTTA--CA-GA-ATTC-AA--CCA-TT--TT-A-GGCC-AA-AATT-AG-GGCACAT----GATATTTA-----C-TTTTTTC-CGTC--AT--AGAT-AA---AAAT-ATGCT-T--ATGCG--AAT-A-GA----TT-TTT---A--AAATATT--G-AAAAA--GATA--T-ATAGG-TCAG-TG--TTGAAAT-A-GAAA--GAAAAAAC-GA-G-GTCAA-ATATTGCC-TA-TT-G-C-------GTA-A-T---------------------A-GTAC-GG-AA--AACATGTG-GCT--A---TTTTTA-T--C-----ATCT-TCA--A-A--TGTAACA-A--ATT--TTT-AT-A--TTC-AA-TTT-TG--AA-T-CATTTAATTATACA----GTGATATAA-GAAT-TCA--CAGTATAC--------AAA-TACC-A-TATCCAA-TTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----G--AA--AAA-T--ACATTCA----T--TT-GTGA-TTTTAGTGC--A-AAA-AG-AAAAA--AA-T-TCGT-C--AT-A-AT-CA-GATC-CA-A---ATTT-AGGAAC-A-CC-TT-GAATA-TTAAC-T-TTTTTTC-A---CAT--GATA----A--CAGTATGTTCTcctaaccaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaggggcgcgtcgatggtgaacgttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtt
gi|6 : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTATTGAAATATTGCACTATAA-TGATAAGTG-AGGTA-ATA-GA-GTTCCATCAG-TTTTT------CTGGAAAAAAATTCA-TAAG-CAGT----TT---AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAGAAA-GCAATTG-CTAAA-TACCTGTGAA-AT---TA-TTGCTA-AAA-T-TAG-CA-CAAAGATTTTTT-CTGA--TCAA--AAG-AAAA-AAT-GA-GACAGAATAAT--AGATA-TTTGCATGT-TAGTATTAT-T-ATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AATAATTT-AACA-AGC--TT-GAAGAATT-AA-A-TAT-TTT--AACA-A---GTA--TTTCAATATAGCTAGCAA--TT-G-CTTAAA-A-TTTGGTC-ATTTT--GTTTGGCAGAAAATTTAATCA-GAGATTCAAA--CAT-TTTATT-A-GGCC-AACAATTTAG-GCAATATT-G-AATATTTA--AC-T-TTTTTTC-AGTCATAT--AGATCAAT--AAATGATGCT-TAAAT-CG--AATCA-GA----TT-TTT---AATAAATATTTGA-AAAAA--AAGA--T-ATAGG-TCAGTTGGTTTGAAATAA-GAAA--ACAAAAAC-GA-GTGT-AA-ATATTTCG-TATTT-G-C------TGTGTA-T-GAT-TT---TG-GAAAATGAA-GTACGG---A--AACGT----ATT--A----TTTTA-T--C-GGGTATTT-ACATTACATCTGTAAAG-AACATT--TTCAAT-A--TTCGAA-TTT-TGGTAA-TGCATTTAATTATACA-AGTATTATA-AATGGATATCACGCAGTATATACCAGA-AAAA-TACC-ATTATCC-ATTTTT-T---AT-GCCTA---TTTCAGTTGTTTTT-----GCAAA--AAATT--ACATTCATTT-T--TT-GTGACTTTTAGTGC-AA-AAACAG-AACAAGTAG-T-TCGT-C--AT-A-AT-CAGGACC-C--G---AATT-AGG-AC-AGCCGTTGGAATATTTACG-T-TTTTTTC-AA-GATTGTGATA----AATCAATATGTTCTtcatatcaaccattagttacgtgctaaccgtttttcggagcgtagaccctaaatacattgcaaatatattacgcctctcattttagcggggaaaagtgcagcgatgtgaacagttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|7 : TGCAATGCTGAATTTTT-GAATAAATTTAACCTTT-TTA-TGAAATAATGCATTA-AAATGATA---G-AGGTA-ATA-TATGGTCCATCA--TTTTC------T-GGAAAAAA--TTAATAGGTCAGTG---CT-G-AAA-TAAGG--A-G---TTTA-CTACCCTTGGTTAAGAG-AA-GCA--TG-CTAAAATACC--TGAA--T---TA-TTGCTA-AAA-A-TAG-CAACAAAATT--TTT-CAGA--TC-A--AAA-AGCACAAC-GA-GACAGAA-AA---AGA-A-TTTGCATGG-TA-T-TAT--T-ATATCTAG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTT-AACC-AGC--TT-GAA-AAAT-CA-T-T-T-TTA--AACA-AAC-GTT--TTTCAA--TAGCTAGC-A--TT-A-CTTAAA-A-TTT-GTT-ATTTT--GTT--TC--AAAATTTA--CATGA-ATTC-AA--CAT-TT--TT-AGGGCC-AA-AATCCAGTGGCACATTGG-AATATTTA--ATTT-TTTTTTC-AGTC--ATGAAGAT-AA---AAAT-A-GCT-T--AT-CG---ATCA-GA----TT-TTTTAAA--AAATATT--G-AAAAAATAATA----ATAGG-T-AG-TG--TTGAAATAA-GAAA--G-AAAAAC-GAGG-GTCAATATATTGCC-CA-TT-GCC------TGTA-A-T-GATATTTGATG-GGAA---AA-GTACGGA-AA--AAC--GTG-ATT--AATTTTTTTT-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTT-AT-AATTCC-AA-TTT-CG--AA-TGCATTTAAATATACATAGTATGAT--AA-GGATATCA-----TATAC-----A-AAAA-ATCC-ATTGTCC-ATTTTT-T-A-AT-G-CTA---TTT-AG-----TTT-----GCAAA--AAATTA-ACATTCA--T-T--TT-GTGA-TTTTAGTGCAAA-AAA-AG-AACAA--AA-T-TCGTCC--AT-A-GA-CA-GACC-C--A---A-TT-ATG-AC-G-CC-TC--AATATT--AC-T-TTTTTTCAAA-GCATG-GAT-----A--CAATATTTTCTtctatcagacatgcttgacaagtggctattcggtttgcgagcgtagaccgctaaaacatctttgcaaaattattatagcctattttaagcggggaataagtggcgcagttatctcgatggaacagtttcc
gi|8 : TGCAA-GCTGAATTTTT-TAAT---TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TT--CATGT-TA-T-TTA--T-ATATC-AG-TATC-AATAACNNNNNNNNNNNNNNNNNNNNNNNNNATTCAAAAC-AAT--CTT-AACA-CGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-ATTTT--GTT--GC--AAAATTTA--CA-AA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTTTG-GGCACATT-G-AATATTTA--ACTT-TTTTTTT-AGTC--AT--AGAT-AA---AGAT-ATGCT-T--AT-CG--AATCA-GA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-TTAGG-TCAG-TG--TTGAAATAA-GAAA--G-AAAAAC-GA-G-GTCAA-ATATTGTCGTA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-GAAA---AA-GTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-ATGA-TTTTAGTGC-CA-AAA-AG-ATCAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTACC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCTca
gi|9 : ATC-A-TAAC-------------------------ATTCAAA-C-AAT--CTT-AACC-AGC--TT-GAA-AATT-CA-T-T-G-TTC--AACA-A---GTAATTTTCAA-ATA-CGAGC-A--TT-GACTTAAA-AGTCT-GTT--CTGT--GTT--GC-----ATTTA--CA---------AG--TAT-TT--TT-T-GT------AATTCTA-GGC-CTTC-G-----TTTT--ACTT-TTCTTTCGAGTC--AT--AG---AA---AAAT-ATGCT-T--AT-CG---ATCA-GA----TT-TTT---A--AAATATT--G-AAAGA--AATA--TAATAGG-TCAG-TG--
gi|9 : aTCGATCAGATTTTTAAAATATTGAAAGAAATATAA-TAGGTCAGTGATCTC-G----ATAAGGCCA-GGGTCT-ATCTGCCCTatctcgataaggccagggtctatctgccctagttgcgtatgtcggatgtggtttatttttaatggcgggtatttacaacttgtacttatcattattcaaatttatgaaatgcatttaattatacaagttagtaggacatcacagttataaataccaattatccttttttatatcgtcatttcagtttgttcttatatttgtgattttagtgcaaaaaagaaacaaaatatagtataatcccgatctaaatattcgagacccttgtatattcatttttttcaggcatggataacaatatgttc
gi|9 : aatcataacattcaaacaatcttaaccagcttgaaaattcattgttcaacaagtaattttcaaatacgagcattgacttaaaagtctgttctgtgttgcatttacaagtattttttgtaattctaggccttcgttttacttttctttcgagtcatagaaaaatatgcttaATGTG-GTTT-A---TTTTTAATGGC-GGGTATTT-ACA--AC-T-TGTA-C------TT--ATC-ATTA--TTC-AAATTTATG--AAATGCATTTAATTATACA-AGT-TAGT---A-GGACATCA--CAGT-TAT--------AAA-TACCAATTATCC--TTTTT-T-ATATCG-TCA---TTTCAG-----TTT-----G---------TT-----CTTA--TAT--TT-GTGA-TTTTAGTGC-AA-AAA-AGAAACAA--AA-TATAGT----AT-A-ATCCC-GATC-T--AAATATTC-GAG-AC---CC-TT-GTATATTCA---T-TTTTTTC-AG-GCATG-GATA----A--CAATATGTTCagttgcgtatgtcggatgtggtttatttttaatggcgggtatttacaacttgtacttatcattattcaaatttatgaaatgcatttaattatacaagttagtaggacatcacagttataaataccaattatccttttttatatcgtcatttcagtttgttcttatatttgtgattttagtgcaaaaaagaaacaaaatatagtataatcccgatctaaatattcgagacccttgtatattcatttttttcaggcatggataacaatatgttc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ACGGATTGTTAATGTGTAGATTGTTATATCAATTGTGATCTTGTGAAAAAAATCGTTATCAAAAGATACCTCCACTGCTATTGCATAGATTCCGCGAATATTTCTAAAGCCTCTTGTGGTTTGTAGATTTAAATCCAATGCTCTTATTTTGTTTTACACGTCCATTATCCTCTTCGAAACTCATCGGCGACGTATAATTGACAGAATGGGTACCGAGGTTACGTTCCGTGCGCAACTAGTCAAAAACAATGACCAGTCACAC
Alignments
lowQualScore : 1 11111111 11 22222 1 111 4444444444444444444444444 111 11 1111111 11 111 11 111 111 1 1 1 111111 1 1 111 11 11 11 11 1111111 11111 11111 11
lowQualScore : 4 3 99 6 3 3 0 3 7 666 3 3 3 7 77 22222222 88 6 555 3 3 7 1 44 3 555 6 3 33 3 3 55 3 88 99 3 555 3 3 3 4 4 8 88888 2 55 4 55 4 4 4 4 3 111 666 8 4 4 4 3 4 4 4 0 0000000000000000000000000 0 4 55 55 99 4 4 4 666 4 4 55 4 222 55 4 4 55 555 4 8 4 4 4 11 55 99 55 8 4 4 55 4 55 8 4 4 4 3 4 4 4 5555555 4 55 11 4 222 4 4 22 4 222 4 9999 4 333 66 66 4 66 7777 4 4 66 5 66 0 5 5 5 0 5 0 5 5 5 999999 0 5 5 0 000 6666 888 77 66 77 4 99 777 55 99 4 4 55 4 4 55 66 4 4 22 4 4 4 00 4 1 4 0 44 4 1 66 7777777 4 4 5 0 4 4 4 4 4 777 55555 99999 55555 88 8888 55 3 3 55 3 3 3 55 3 7 7 55 3 3 3 3 3 55 666 3 3 555 3 3 3 0 4 4 4 4 7 99999 55
lowQualScore : . . .. . . . . . . ... . . . . .. ........ .. . ... . . . . .. . ... . . .. . . .. . .. .. . ... . . . . . . ..... . .. . .. . . . . . ... ... . . . . . . . . . ......................... . . .. .. .. . . . ... . . .. . ... .. . . .. ... . . . . . .. .. .. .. . . . .. . .. . . . . . . . . ....... . .. .. . ... . . .. . ... . .... . ... .. .. . .. .... . . .. . .. . . . . . . . . . . ...... . . . . ... .... ... .. .. .. . .. ... .. .. . . .. . . .. .. . . .. . . . .. . . . . .. . . .. ....... . . . . . . . . . ... ..... ..... ..... .. .... .. . . .. . . . .. . . . .. . . . . . .. ... . . ... . . . . . . . . . ..... ..
lowQualScore : 0 3 22 7 3 3 9 6 3 444 6 6 6 3 33 66666666 77 7 888 3 3 3 0 66 3 888 7 3 66 6 6 00 3 00 22 3 888 3 6 6 0 0 0 00000 0 55 0 55 0 0 0 0 4 000 333 0 0 0 0 4 0 4 0 8 0000000000000000000000000 8 0 55 55 55 0 0 0 888 0 0 55 0 555 55 0 0 55 333 0 0 0 0 0 00 55 55 55 0 0 0 55 0 55 0 0 0 0 0 0 0 0 4444444 0 55 00 0 222 4 4 22 4 444 4 4444 4 999 11 11 4 11 0000 4 4 11 0 99 0 0 0 0 0 0 0 0 0 0 444444 0 0 0 0 444 2222 888 22 11 99 0 55 000 22 00 0 0 55 0 0 55 11 4 4 22 4 4 4 66 4 1 4 8 77 4 9 11 4444444 4 4 7 8 0 0 0 0 0 000 55555 11111 44444 66 5555 00 6 6 66 6 6 6 00 6 3 3 00 6 6 6 6 6 99 444 6 6 555 6 6 2 7 0 0 0 0 3 33333 55
consensus : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTA--ACTT-TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-GAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
Reference ( family-5196 ) : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTA--ACTT-TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-GAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
gi|1 : AA-GCTGAATTTTT-GAATAAATTTAACCTTT-TTA-TGAAATAATGCATTA-AAATGATA---G-AGGTA-ATA-TATGGTCCATCA--TTTTC------T-GGAAAAAA--TTAATAGGTCAGTG---CT-G-AAA-TAAGG--A-G---TTTA-CTACCCTTGGTTAAGAG-AA-GCA--TG-CTAAAATACC--TGAA--T---TA-TTGCTA-AAA-A-TAG-CAACAAAATT--TTT-CAGA--TC-A--AAG-AAGA-CAA-GA-GAAAGAATAATAAAGA-ACTTTGCATGGATA-T-ATA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAACTAAT--CTTAA--CCAGCA-TT-GAA-AAAT-CA-A-T-T-TTTTTAACA-A---GTT--CTTTCA-ATAGCTAGC-AATTT-A-CTTAAA-A-TTT-GTT-A-TTTTTTGTT--TC--CAAATTTA--CATGA-ATTC-AAAACATCTT--TT-A-GGCC-AA-AAT-CAG-GGCACATT-GGAATATTTA--ATTTATTTTTTC-AGTC--AT--AGAT-AATAAAAAT-ATGCTCT--AT-CG--AAT-CAGA----TTATTT---A--AAATATT--G-AAAAA--AATAATT-ATAGGATAAG-TG--TTGAAAT-AAGAAAAAG-AAAAAC-GA-G-GTCATTATATGC-CC-CA-TTTG-CC-----TGCA-AAT-GATATTT-ATG-G-GAA---AAGTACGGA-AA--AACA-GTG-ATTTAA---TTTTTT-TTTC-GGGTATTT-ACA--ACAT-TGTAACACA--ATT--TTT-AT-AATTCC-AA-TTT-CG--AA-T-CATTTAATATTACA-AGTATGATT-AA-GGAT-TCA--TCATATAC-----A-AAAAATACC-ATTGTCCAATTTTT-T-A-AT-G-CTAAATTCTCAG-----TTT-----GC-AAACAAATTTAACATTCA--T-TAATT-GTGA-ATTTGGCAA-AATAAG-AG-AACAA--AATT-TCGTCC--AT-A-AC----GA-C-C--A---ATT---AG-AC-G-CC-TT-CAATA-TTAAC---TTTTTTC-AA-GCATGAGATATACCA--TATTATGTTC
gi|10 : TGAATTTTT-GAATA--TTTAAC-TGT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-GGGTA-ATA-TA-GATCCATCA--TTTCC------TGGGAAAAAAA--TA-TAGGTCAATG---TT-G-AAAATAAAG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TGTC--TGAA-AT---TA-TTGCTA-AAA-T-TAG-CA-CAAA-----TTTTCTGA--TC-A--GAG-AAAA-AAT-GA-GACAGAATAA---ATA-A-TTTGCATGT-TT-T-TTA-TTGTA-A-AG-TATC-A----C-------------------------ATTCAAAAC-AAT--CTGAA--CCAGC--AT-GAA-ACTT-TA-T-T-T-TTT--AACA-T---GTA--TTTGAA-ATAGCTATA-A--TT-A-CTTGAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TTAA-GGCC-AA-AATTTAG-GGCACATT-G-AATATTCA--AC---TTTTTTC-AGTC--AT--AGAT-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaatgcgcaagtcaaatgtgaacagttcctttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctac
gi|11 : TGCAA-TCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-Tg
gi|11 : tatttaaggatgaAATTTTT-G-A-AT-----A---TTTAAC-----TTTTTATAGC-AAGCAAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-CA-AAA-AG-GACAA--AA-T-TCGT-C--ATAA-AT-CA-TACCAA--A---ATAT-AGG-AC-A-CA-TT-GAATATTTAAC-TATTTTTTC-AA-GCGTC-GTTA----A--GAATATGTTCTagcaagcaaattacattcattttgtgattttagtgccaaaaaggacaaaattcgtcataaatcataccaaaatataggacacattgaatatttaactattttttcaagcgtcgttaagaatatgttcttcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|13 : tatttaaggatgatgcaatctgTGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA-----AGGTA-ATA-TA-GGTCCATCA--TTTTT------T--GGAAAAAAATTA-TAGGTCAGTG---TT-GAAAAATAAGG--A-G---TT-A-CTGCCCTTGGC--AGAG-AA-GCA--TG-CTAAA-TGCC--TGAA-ATATGCA-TTCCTA-AAA-tcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|14 : TTTT-GATTA--TTCAAC-TTT-TCA-ATAAATA-TGCATCA-AA-TGATA---G-AGGTA-ATA-TA-GGTTAATTA---TTTT------CTGAGAAAAAAATCA-TAAGTCAGAG---TT-A-AAAAGAA----A-G---TT-A-CTGCTCTTGGT--AGAG-AA-GCA--TG-CTAAA-TGTC--TGAA-AT---TA-TTg
gi|15 : G-CAAAT-TACCACTGAA-AT----A-TTCCTA-AAATA-TAG-CA-CAAA-----GT---TGA--TC-AAGAAG-AACA-AAT-GA-GACAAAA-AA---A------TTGCATTTATA-T-TTA--AATATC-Attta
gi|16 : T-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAAAGC-AA-AAA-AG-AACAA--AA-T-TCGT-CATAT-A-AT-CA-GACC-CA-A---ATTT-AGA-AC-A-CC-TT-GA
gi|17 : ATG-GATA----A--CAATATGTTCT
gi|18 : A--AAC--GTG-ATT--A---TTTTTT-TT-C-GGGTATTT-ACA--ACAT-TGTAACA-A--tcatatcagacatgttgacagtgctaccgtttctgcgagcg
gi|2 : A-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---GAAAGT--ATA-TA-GGT-CATC----TTTT------TTG--AAAAAAATTA-TAGGTCCATG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGCA-AGAG-AA-GCA--TA-CTAAA-TGCC--TGAA-AT---CA-TTGCTA-AAA-A-T-G-CA-CAAAT----TTT-CTGA--TC-A--AAGAAAAA-AAT-GA-GACAGAAAAA---AGA-A-TTTGCATGC-TA-T-CTAGTTATATC-AGTTATCAAATAAC-------------------------ATTC--AAC-AAT--CTTAAATACAGCTTTT-GAA-AATTCCA-A-T-T-TTT--AACA-A---ATA--TCTAAA-ATAGATAGC-A--TTAG-CTTAAACA-TTT-GTCAA-TTTT--GTT--GCA-AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCCAAA-AATTTAG-GGCACATT-G-AATATTTA-----C-TTTTTTC-AGTC--AT--A-AT-AA---AAAT-ATACT-TAAAT-CGA-AAT-CAGAATTTTT-TTT---T--AAATATT--GAAAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAACGGA-G-GTGAA-ATATTG-CC-T--TT-G-CGAAGTATGTG-A-A-AAT-TTTAATGCA-AAA---AAGTACGGA-AATTACTATGTGTATT--A---TTTTTC-TG-C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATTTGTTC-AT-T--CTC-AA-TTT-TG--AA-TGCATTTAATTAT----------ATA-AA-GGA-ATCA--CAGAATAC-----AGAAAA-TACC-ATTATCCAATTTTTGTGA-AT-G-CTA---TTTCAG-----TTT-----GCAAA--AAATT--ACATTCA--T-T--TTAATGA-TTTTAGTGC-AG-AAA-AG-AACAA--AA-TGTCGT-C--AT-A-AT-CA-GAAC-CAAA---ATTTAAGG-ATAA-TC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GAT-----A--CATTATGTTC
gi|3 : gcCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-CGATA---G-AGGTA-ATA-TT-GGTCCATCA--TTTTT------Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaaatggcgcagtttgatgtgaaagagttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc
gi|3 : --TTTTT------TTGAAAAAAAAATTA-TAGGTCAGTG---TT-G-AAA-TAAAG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAA--TACC--TGAA-AT---TA-TTGCTA-AAA-AATAG-CA-CAAA-----TTTTCTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGG--TT-TGA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-ATTTT-GTC-ATTTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-G-GACC-AA-AATTTAG-GGCACATT-G-AATATTTA--AC-T-TTTTTTC-A-TC--AT--AGAT-AA---AAAT-ATGCC-T--AT-CG--AATAAAGA----TT-TTTTA-A--AAATACT--G--AAAA--AATA--T-ATAGG-TCAG-TG--TTGAAATAAAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTGCCC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-GAAAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-AGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGA-A-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC--A--AAATT--ACATTCA----T--TT-GTGA-TTTTAAGAA-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-ATAA-CA-GACC-CA-A---ATTT-AGA-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCnnnnnnnnnnnnnnnnnnnnnnnnncatttttttttgaaaaaaaaattataggtcagtgttgaaataaagagttactgcccttggtagagaagcatgctaatacctgaaattattgctaaaaaatagcacaaattttctgatcaaagaaaaaatgagacagaataaagaatttgcatgttatttattatatcagtatcaataacattcaaaacaatcttaaccaggtttgaaattcaatttttaacaagtatttcaaatagctagcattgcttaaaattttgtcatttttgttgcaaaatttacagaattcaacatttttggaccaaaatttagggcacattgaatatttaactttttttcatcatagataaaaatatgcctatcgaataaagattttttaaaaatactgaaaaaatatataggtcagtgttgaaataaagaaagaaaaacgaggtcaaatattgccctattgctgtaatgattttatggaaaaaagtacgggaaaacatgtgattatttttatcaggtatttacaacattgtaacaaattttcatattcaattttgaatgcatttaattatacaagtatgaaaaggatatcacagtatacaaaaataccattatccaattttttaatgctatttcagtttgcaaaattacattcatttgtgattttaagaaaaaaaagaacaaaattcgtcatataacagacccaaatttagaacaccttgaatatttaactttttttcaagcatggataacaatatgttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|4 : caagctgaatttttgaatatttaactttttatgaaatatgcattaaacgatagaggtaatattggtccatcattttttnnnnnnnnnnnnnnnnnnnnnnnnncattAA-GTTGAATTTTTTGAATA--TTTAAC-TTTGTTA-T-AAATA-TGCATTA-A--TGATA---G-AGGTA-ATACTA-GGTCCATCA--TTTTC------T-GGGAAAAAAATTA-TAGGTCAGTG---TTTG-AAAATAAGG--AAG---TT-A-CTGCCCTTG-T--AGAG-AA-GCA--TGGCTAA--TACC--TGAC-AT---TAAGTGCTATAAA-A-TAGGCA-AAAT-----TTT-CTGAAATC-A--AAG-AAAA-AATTGATGATAGAATAA----GA-A-TTTGCATGT-TA-C-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAA-C-AAT--CTTTA--CAAGC--TTTGAA-AATT-CA-AAT-TATTT--AACA-ACAAGTA--TTCAAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTTTGGTT--GC--AAAATTTA--CA-GA-AT-C-AA--CAT-TT--TTTA-GGC--AA-AATTCAG-GGCACATT-G-AATATTTATAACTT-TTTTTTC-AGTC--ATTTAGAT-AA---AAAT-ACTCT-T--AT-CGCGACT-CAGA----TT-TT----A--AAATATT--G-AAAAA--A-TA--T-ATAG--TCAG-TG--T-GAAAT-AAGAAA--G-AAAAGC-GA-G-GTCAA-ATATTG-TCGTA-T--G-C------TGTACA-TCGAT-TTT-TCT-G-GAA---AAGTACGGGGAA--AAC-TGTG-ATT--A---TTTTTA-T--CTGGGTATTTTACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TGA-AA-TGCATTTAATTATACA-AGTATGAT--AA-GGATATCA--CAGTATAC-----A-AAAA-TA-C-ATTATCCAA-TTTT-T-A-AT-G-CTA---TTTCAAGT---TTT-----GCAAA--AAATT--ACA-TCA--T-T--TT-GTGA-TTTTAGTGC-CA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-TTG-AC-A-CC-TT-GAATAGTTAACTT-TTTTTTC-AACGCATG-Gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|5 : CAA-GCTGATTTTTT-AAATA--TCTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---A-GAGTACATA-TA-GGTCACTC----TTTT------CTGGAAAAAA--TTA-TAGGTCAGTT---TT-G-AAC-TAA----A-G---TT-A-CTGCCCTTGGT---GAG-AAAGCA---G-CTAAA----C--TGAACAT---TA-TTGCTA-AAA-A-TAG-CA-CAAG-----TTTTCTGA--TC-A--AAG-GAAA-AAT-GA-GACAGA-TAA---AGA---TTTGCATGT--A-T-CTA-T-AT-TC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-A-TT-CACA-T-T-TTT--AACACA---GTA--TTTCAA--TAGCTAGC-A-------CTTATA-A-TTT--TA-A-TTTT----T--GC--AAAATTTA--CA-GA-ATTC-AA--CCA-TT--TT-A-GGCC-AA-AATT-AG-GGCACAT----GATATTTA-----C-TTTTTTC-CGTC--AT--AGAT-AA---AAAT-ATGCT-T--ATGCG--AAT--AGA----TT-TTT---A--AAATATT--G-AAAAA--GATA--T-ATAGG-TCAG-TG--TTGAAAT--AGAAA--GAAAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C-------GTA-A-T----------------------AGTAC-GG-AA--AACATGTG-GCT--A---TTTTTA-T--C-----ATCT-TCA--A-A--TGTAACA-A--ATT--TTT-AT-A--TTC-AA-TTT-TG--AA-T-CATTTAATTATACA----GTGATATAA-GAAT-TCA--CAGTATAC--------AAA-TACC-A-TATCCAA-TTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----G--AA--AAA-T--ACATTCA----T--TT-GTGA-TTTTAGTGC--A-AAA-AG-AAAAA--AA-T-TCGT-C--AT-A-AT-CA-GATC-CA-A---ATTT-AGGAAC-A-CC-TT-GAATA-TTAAC-T-TTTTTTC-A---CAT--GATA----A--CAGTATGTTCTcctaaccaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaggggcgcgtcgatggtgaacgttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtt
gi|6 : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTATTGAAATATTGCACTATAA-TGATAAGTG-AGGTA-ATA-GA-GTTCCATCAG-TTTTT------CTGGAAAAAAATTCA-TAAG-CAGT----TT---AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAGAAA-GCAATTG-CTAAA-TACCTGTGAA-AT---TA-TTGCTA-AAA-T-TAG-CA-CAAAGATTTTTT-CTGA--TCAA--AAG-AAAA-AAT-GA-GACAGAATAAT--AGATA-TTTGCATGT-TAGTATTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AATAATTTAA--CAAGC--TT-GAAGAATT-AA-A-TAT-TTT--AACA-A---GTA--TTTCAATATAGCTAGCAA--TT-G-CTTAAA-A-TTTGGTC-A-TTTT--GTTTGGCAGAAAATTTAATCA-GAGATTCAAA--CAT-TTTATT-A-GGCC-AACAATTTAG-GCAATATT-G-AATATTTA--AC-T-TTTTTTC-AGTCATAT--AGATCAAT--AAATGATGCT-TAAAT-CG--AAT-CAGA----TT-TTT---AATAAATATTTGA-AAAAA--AAGA--T-ATAGG-TCAGTTGGTTTGAAAT-AAGAAA--ACAAAAAC-GA-GTGT-AA-ATATTT-CG-TATTT-G-C------TGTGTA-T-GAT-TT---TG-G-AAAATGAAGTACGG---A--AACGT----ATT--A----TTTTA-T--C-GGGTATTT-ACATTACATCTGTAAAG-AACATT--TTCAAT-A--TTCGAA-TTT-TGGTAA-TGCATTTAATTATACA-AGTATTATA-AATGGATATCACGCAGTATATACCAGA-AAAA-TACC-ATTATCC-ATTTTT-T---AT-GCCTA---TTTCAGTTGTTTTT-----GCAAA--AAATT--ACATTCATTT-T--TT-GTGACTTTTAGTGC-AA-AAACAG-AACAAGTAG-T-TCGT-C--AT-A-AT-CAGGACC-C--G---AATT-AGG-AC-AGCCGTTGGAATATTTACG-T-TTTTTTC-AA-GATTGTGATA----AATCAATATGTTCTtcatatcaaccattagttacgtgctaaccgtttttcggagcgtagaccctaaatacattgcaaatatattacgcctctcattttagcggggaaaagtgcagcgatgtgaacagttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|7 : TGCAATGCTGAATTTTT-GAATAAATTTAACCTTT-TTA-TGAAATAATGCATTA-AAATGATA---G-AGGTA-ATA-TATGGTCCATCA--TTTTC------T-GGAAAAAA--TTAATAGGTCAGTG---CT-G-AAA-TAAGG--A-G---TTTA-CTACCCTTGGTTAAGAG-AA-GCA--TG-CTAAAATACC--TGAA--T---TA-TTGCTA-AAA-A-TAG-CAACAAAATT--TTT-CAGA--TC-A--AAA-AGCACAAC-GA-GACAGAA-AA---AGA-A-TTTGCATGG-TA-T-T-A-TTATATCTAG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AAAT-CA-T-T-T-TTA--AACA-AAC-GTT--TTTC-A-ATAGCTAGC-A--TT-A-CTTAAA-A-TTT-GTT-A-TTTT--GTT--TC--AAAATTTA--CATGA-ATTC-AA--CAT-TT--TT-AGGGCC-AA-AATCCAGTGGCACATTGG-AATATTTA--ATTT-TTTTTTC-AGTC--ATGAAGAT-AA---AAAT-A-GCT-T--AT-CG---AT-CAGA----TT-TTTTAAA--AAATATT--G-AAAAAATAATA----ATAGG-T-AG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GAGG-GTCAATATATTG-CC-CA-TT-GCC------TGTA-A-T-GATATTTGATG-G-GAA---AAGTACGGA-AA--AAC--GTG-ATT--AATTTTTTTT-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTT-AT-AATTCC-AA-TTT-CG--AA-TGCATTTAAATATACATAGTATGAT--AA-GGATATCA-----TATAC-----A-AAAA-ATCC-ATTGTCC-ATTTTT-T-A-AT-G-CTA---TTT-AG-----TTT-----GCAAA--AAATTA-ACATTCA--T-T--TT-GTGA-TTTTAGTGCAAA-AAA-AG-AACAA--AA-T-TCGTCC--AT-A-GA-CA-GACC-C--A---A-TT-ATG-AC-G-CC-TC--AATATT--AC-T-TTTTTTCAAA-GCATG-GAT-----A--CAATATTTTCTtctatcagacatgcttgacaagtggctattcggtttgcgagcgtagaccgctaaaacatctttgcaaaattattatagcctattttaagcggggaataagtggcgcagttatctcgatggaacagtttcc
gi|8 : TGCAA-GCTGAATTTTT-TAAT---TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TT--CATGT-TA-T-TTA-T-ATATC-AG-TATC-AATAACNNNNNNNNNNNNNNNNNNNNNNNNNATTCAAAAC-AAT--CTTAA--CACGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-AA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTTTG-GGCACATT-G-AATATTTA--ACTT-TTTTTTT-AGTC--AT--AGAT-AA---AGAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-TTAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-TCGTA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-AAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-ATGA-TTTTAGTGC-CA-AAA-AG-ATCAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTACC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCTca
gi|9 : ATC-A-TAAC-------------------------ATTCAAA-C-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-T-T-G-TTC--AACA-A---GTAATTTTCAA-ATA-CGAGC-A--TT-GACTTAAA-AGTCT-GTT---CTGT--GTT--GC-----ATTTA--CA---------AG--TAT-TT--TT-T-GT------AATTCTA-GGC-CTTC-G-----TTTT--ACTT-TTCTTTCGAGTC--AT--AG---AA---AAAT-ATGCT-T--AT-CG---AT-CAGA----TT-TTT---A--AAATATT--G-AAAGA--AATA--TAATAGG-TCAG-TG--
gi|9 : aTCGATCAGATTTTTAAAATATTGAAAGAAATATAA-TAGGTCAGTGATCTC-G----ATAAGGCCA-GGGTCT-ATCTGCCCTatctcgataaggccagggtctatctgccctagttgcgtatgtcggatgtggtttatttttaatggcgggtatttacaacttgtacttatcattattcaaatttatgaaatgcatttaattatacaagttagtaggacatcacagttataaataccaattatccttttttatatcgtcatttcagtttgttcttatatttgtgattttagtgcaaaaaagaaacaaaatatagtataatcccgatctaaatattcgagacccttgtatattcatttttttcaggcatggataacaatatgttc
gi|9 : aatcataacattcaaacaatcttaaccagcttgaaaattcattgttcaacaagtaattttcaaatacgagcattgacttaaaagtctgttctgtgttgcatttacaagtattttttgtaattctaggccttcgttttacttttctttcgagtcatagaaaaatatgcttaATGTG-GTTT-A---TTTTTAATGGC-GGGTATTT-ACA--AC-T-TGTA-C------TT--ATC-ATTA--TTC-AAATTTATG--AAATGCATTTAATTATACA-AGT-TAGT---A-GGACATCA--CAGT-TAT--------AAA-TACCAATTATCC--TTTTT-T-ATATCG-TCA---TTTCAG-----TTT-----G---------TT-----CTTA--TAT--TT-GTGA-TTTTAGTGC-AA-AAA-AGAAACAA--AA-TATAGT----AT-A-ATCCC-GATC-T--AAATATTC-GAG-AC---CC-TT-GTATATTCA---T-TTTTTTC-AG-GCATG-GATA----A--CAATATGTTCagttgcgtatgtcggatgtggtttatttttaatggcgggtatttacaacttgtacttatcattattcaaatttatgaaatgcatttaattatacaagttagtaggacatcacagttataaataccaattatccttttttatatcgtcatttcagtttgttcttatatttgtgattttagtgcaaaaaagaaacaaaatatagtataatcccgatctaaatattcgagacccttgtatattcatttttttcaggcatggataacaatatgttc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ACGGATTGTTAATGTGTAGATTGTTATATCAATTGTGATCTTGTGAAAAAAATCGTTATCAAAAGATACCTCCACTGCTATTGCATAGATTCCGCGAATATTTCTAAAGCCTCTTGTGGTTTGTAGATTTAAATCCAATGCTCTTATTTTGTTTTACACGTCCATTATCCTCTTCGAAACTCATCGGCGACGTATAATTGACAGAATGGGTACCGAGGTTACGTTCCGTGCGCAACTAGTCAAAAACAATGACCAGTCACAC
Alignments
lowQualScore : 1 11111111 11 22222 1 111 4444444444444444444444444 111 11 1111111 11 111 11 111 111 1 1 1 111111 1 1 111 11 11 11 11 1111111 11111 11111 11
lowQualScore : 4 3 99 6 3 3 0 3 7 666 3 3 3 7 77 22222222 88 6 555 3 3 7 1 44 3 555 6 3 33 3 3 55 3 88 99 3 555 3 3 3 4 4 8 88888 2 55 4 55 4 4 4 4 3 111 666 8 4 4 4 3 4 4 4 0 0000000000000000000000000 0 4 55 55 99 4 4 4 666 4 4 55 4 222 55 4 4 55 555 4 8 4 4 4 11 55 99 55 8 4 4 55 4 55 8 4 4 4 3 4 4 4 5555555 4 55 11 4 222 4 4 22 4 222 4 9999 4 333 66 66 4 66 7777 4 4 66 5 66 0 5 5 5 0 5 0 5 5 5 999999 0 5 5 0 000 6666 888 77 66 77 4 99 777 55 99 4 4 55 4 4 55 66 4 4 22 4 4 4 00 4 1 4 0 44 4 1 66 7777777 4 4 5 0 4 4 4 4 4 777 55555 99999 55555 88 8888 55 3 3 55 3 3 3 55 3 7 7 55 3 3 3 3 3 55 666 3 3 555 3 3 3 0 4 4 4 4 7 99999 55
lowQualScore : . . .. . . . . . . ... . . . . .. ........ .. . ... . . . . .. . ... . . .. . . .. . .. .. . ... . . . . . . ..... . .. . .. . . . . . ... ... . . . . . . . . . ......................... . . .. .. .. . . . ... . . .. . ... .. . . .. ... . . . . . .. .. .. .. . . . .. . .. . . . . . . . . ....... . .. .. . ... . . .. . ... . .... . ... .. .. . .. .... . . .. . .. . . . . . . . . . . ...... . . . . ... .... ... .. .. .. . .. ... .. .. . . .. . . .. .. . . .. . . . .. . . . . .. . . .. ....... . . . . . . . . . ... ..... ..... ..... .. .... .. . . .. . . . .. . . . .. . . . . . .. ... . . ... . . . . . . . . . ..... ..
lowQualScore : 0 3 22 7 3 3 9 6 3 444 6 6 6 3 33 66666666 77 7 888 3 3 3 0 66 3 888 7 3 66 6 6 00 3 00 22 3 888 3 6 6 0 0 0 00000 0 55 0 55 0 0 0 0 4 000 333 0 0 0 0 4 0 4 0 8 0000000000000000000000000 8 0 55 55 55 0 0 0 888 0 0 55 0 555 55 0 0 55 333 0 0 0 0 0 00 55 55 55 0 0 0 55 0 55 0 0 0 0 0 0 0 0 4444444 0 55 00 0 222 4 4 22 4 444 4 4444 4 999 11 11 4 11 0000 4 4 11 0 99 0 0 0 0 0 0 0 0 0 0 444444 0 0 0 0 444 2222 888 22 11 99 0 55 000 22 00 0 0 55 0 0 55 11 4 4 22 4 4 4 66 4 1 4 8 77 4 9 11 4444444 4 4 7 8 0 0 0 0 0 000 55555 11111 44444 66 5555 00 6 6 66 6 6 6 00 6 3 3 00 6 6 6 6 6 99 444 6 6 555 6 6 2 7 0 0 0 0 3 33333 55
consensus : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTA--ACTT-TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-GAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
Reference ( family-5196 ) : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTA--ACTT-TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-GAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
gi|1 : AA-GCTGAATTTTT-GAATAAATTTAACCTTT-TTA-TGAAATAATGCATTA-AAATGATA---G-AGGTA-ATA-TATGGTCCATCA--TTTTC------T-GGAAAAAA--TTAATAGGTCAGTG---CT-G-AAA-TAAGG--A-G---TTTA-CTACCCTTGGTTAAGAG-AA-GCA--TG-CTAAAATACC--TGAA--T---TA-TTGCTA-AAA-A-TAG-CAACAAAATT--TTT-CAGA--TC-A--AAG-AAGA-CAA-GA-GAAAGAATAATAAAGA-ACTTTGCATGGATA-T-ATA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAACTAAT--CTTAA--CCAGCA-TT-GAA-AAAT-CA-A-T-T-TTTTTAACA-A---GTT--CTTTCA-ATAGCTAGC-AATTT-A-CTTAAA-A-TTT-GTT-A-TTTTTTGTT--TC--CAAATTTA--CATGA-ATTC-AAAACATCTT--TT-A-GGCC-AA-AAT-CAG-GGCACATT-GGAATATTTA--ATTTATTTTTTC-AGTC--AT--AGAT-AATAAAAAT-ATGCTCT--AT-CG--AAT-CAGA----TTATTT---A--AAATATT--G-AAAAA--AATAATT-ATAGGATAAG-TG--TTGAAAT-AAGAAAAAG-AAAAAC-GA-G-GTCATTATATGC-CC-CA-TTTG-CC-----TGCA-AAT-GATATTT-ATG-G-GAA---AAGTACGGA-AA--AACA-GTG-ATTTAA---TTTTTT-TTTC-GGGTATTT-ACA--ACAT-TGTAACACA--ATT--TTT-AT-AATTCC-AA-TTT-CG--AA-T-CATTTAATATTACA-AGTATGATT-AA-GGAT-TCA--TCATATAC-----A-AAAAATACC-ATTGTCCAATTTTT-T-A-AT-G-CTAAATTCTCAG-----TTT-----GC-AAACAAATTTAACATTCA--T-TAATT-GTGA-ATTTGGCAA-AATAAG-AG-AACAA--AATT-TCGTCC--AT-A-AC----GA-C-C--A---ATT---AG-AC-G-CC-TT-CAATA-TTAAC---TTTTTTC-AA-GCATGAGATATACCA--TATTATGTTC
gi|10 : TGAATTTTT-GAATA--TTTAAC-TGT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-GGGTA-ATA-TA-GATCCATCA--TTTCC------TGGGAAAAAAA--TA-TAGGTCAATG---TT-G-AAAATAAAG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TGTC--TGAA-AT---TA-TTGCTA-AAA-T-TAG-CA-CAAA-----TTTTCTGA--TC-A--GAG-AAAA-AAT-GA-GACAGAATAA---ATA-A-TTTGCATGT-TT-T-TTA-TTGTA-A-AG-TATC-A----C-------------------------ATTCAAAAC-AAT--CTGAA--CCAGC--AT-GAA-ACTT-TA-T-T-T-TTT--AACA-T---GTA--TTTGAA-ATAGCTATA-A--TT-A-CTTGAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TTAA-GGCC-AA-AATTTAG-GGCACATT-G-AATATTCA--AC---TTTTTTC-AGTC--AT--AGAT-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaatgcgcaagtcaaatgtgaacagttcctttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctac
gi|11 : TGCAA-TCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-Tg
gi|11 : tatttaaggatgaAATTTTT-G-A-AT-----A---TTTAAC-----TTTTTATAGC-AAGCAAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-CA-AAA-AG-GACAA--AA-T-TCGT-C--ATAA-AT-CA-TACCAA--A---ATAT-AGG-AC-A-CA-TT-GAATATTTAAC-TATTTTTTC-AA-GCGTC-GTTA----A--GAATATGTTCTagcaagcaaattacattcattttgtgattttagtgccaaaaaggacaaaattcgtcataaatcataccaaaatataggacacattgaatatttaactattttttcaagcgtcgttaagaatatgttcttcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|13 : tatttaaggatgatgcaatctgTGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA-----AGGTA-ATA-TA-GGTCCATCA--TTTTT------T--GGAAAAAAATTA-TAGGTCAGTG---TT-GAAAAATAAGG--A-G---TT-A-CTGCCCTTGGC--AGAG-AA-GCA--TG-CTAAA-TGCC--TGAA-ATATGCA-TTCCTA-AAA-tcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|14 : TTTT-GATTA--TTCAAC-TTT-TCA-ATAAATA-TGCATCA-AA-TGATA---G-AGGTA-ATA-TA-GGTTAATTA---TTTT------CTGAGAAAAAAATCA-TAAGTCAGAG---TT-A-AAAAGAA----A-G---TT-A-CTGCTCTTGGT--AGAG-AA-GCA--TG-CTAAA-TGTC--TGAA-AT---TA-TTg
gi|15 : G-CAAAT-TACCACTGAA-AT----A-TTCCTA-AAATA-TAG-CA-CAAA-----GT---TGA--TC-AAGAAG-AACA-AAT-GA-GACAAAA-AA---A------TTGCATTTATA-T-TTA--AATATC-Attta
gi|16 : T-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAAAGC-AA-AAA-AG-AACAA--AA-T-TCGT-CATAT-A-AT-CA-GACC-CA-A---ATTT-AGA-AC-A-CC-TT-GA
gi|17 : ATG-GATA----A--CAATATGTTCT
gi|18 : A--AAC--GTG-ATT--A---TTTTTT-TT-C-GGGTATTT-ACA--ACAT-TGTAACA-A--tcatatcagacatgttgacagtgctaccgtttctgcgagcg
gi|2 : A-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---GAAAGT--ATA-TA-GGT-CATC----TTTT------TTG--AAAAAAATTA-TAGGTCCATG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGCA-AGAG-AA-GCA--TA-CTAAA-TGCC--TGAA-AT---CA-TTGCTA-AAA-A-T-G-CA-CAAAT----TTT-CTGA--TC-A--AAGAAAAA-AAT-GA-GACAGAAAAA---AGA-A-TTTGCATGC-TA-T-CTAGTTATATC-AGTTATCAAATAAC-------------------------ATTC--AAC-AAT--CTTAAATACAGCTTTT-GAA-AATTCCA-A-T-T-TTT--AACA-A---ATA--TCTAAA-ATAGATAGC-A--TTAG-CTTAAACA-TTT-GTCAA-TTTT--GTT--GCA-AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCCAAA-AATTTAG-GGCACATT-G-AATATTTA-----C-TTTTTTC-AGTC--AT--A-AT-AA---AAAT-ATACT-TAAAT-CGA-AAT-CAGAATTTTT-TTT---T--AAATATT--GAAAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAACGGA-G-GTGAA-ATATTG-CC-T--TT-G-CGAAGTATGTG-A-A-AAT-TTTAATGCA-AAA---AAGTACGGA-AATTACTATGTGTATT--A---TTTTTC-TG-C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATTTGTTC-AT-T--CTC-AA-TTT-TG--AA-TGCATTTAATTAT----------ATA-AA-GGA-ATCA--CAGAATAC-----AGAAAA-TACC-ATTATCCAATTTTTGTGA-AT-G-CTA---TTTCAG-----TTT-----GCAAA--AAATT--ACATTCA--T-T--TTAATGA-TTTTAGTGC-AG-AAA-AG-AACAA--AA-TGTCGT-C--AT-A-AT-CA-GAAC-CAAA---ATTTAAGG-ATAA-TC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GAT-----A--CATTATGTTC
gi|3 : gcCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-CGATA---G-AGGTA-ATA-TT-GGTCCATCA--TTTTT------Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaaatggcgcagtttgatgtgaaagagttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc
gi|3 : --TTTTT------TTGAAAAAAAAATTA-TAGGTCAGTG---TT-G-AAA-TAAAG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAA--TACC--TGAA-AT---TA-TTGCTA-AAA-AATAG-CA-CAAA-----TTTTCTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGG--TT-TGA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-ATTTT-GTC-ATTTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-G-GACC-AA-AATTTAG-GGCACATT-G-AATATTTA--AC-T-TTTTTTC-A-TC--AT--AGAT-AA---AAAT-ATGCC-T--AT-CG--AATAAAGA----TT-TTTTA-A--AAATACT--G--AAAA--AATA--T-ATAGG-TCAG-TG--TTGAAATAAAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTGCCC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-GAAAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-AGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGA-A-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC--A--AAATT--ACATTCA----T--TT-GTGA-TTTTAAGAA-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-ATAA-CA-GACC-CA-A---ATTT-AGA-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCnnnnnnnnnnnnnnnnnnnnnnnnncatttttttttgaaaaaaaaattataggtcagtgttgaaataaagagttactgcccttggtagagaagcatgctaatacctgaaattattgctaaaaaatagcacaaattttctgatcaaagaaaaaatgagacagaataaagaatttgcatgttatttattatatcagtatcaataacattcaaaacaatcttaaccaggtttgaaattcaatttttaacaagtatttcaaatagctagcattgcttaaaattttgtcatttttgttgcaaaatttacagaattcaacatttttggaccaaaatttagggcacattgaatatttaactttttttcatcatagataaaaatatgcctatcgaataaagattttttaaaaatactgaaaaaatatataggtcagtgttgaaataaagaaagaaaaacgaggtcaaatattgccctattgctgtaatgattttatggaaaaaagtacgggaaaacatgtgattatttttatcaggtatttacaacattgtaacaaattttcatattcaattttgaatgcatttaattatacaagtatgaaaaggatatcacagtatacaaaaataccattatccaattttttaatgctatttcagtttgcaaaattacattcatttgtgattttaagaaaaaaaagaacaaaattcgtcatataacagacccaaatttagaacaccttgaatatttaactttttttcaagcatggataacaatatgttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|4 : caagctgaatttttgaatatttaactttttatgaaatatgcattaaacgatagaggtaatattggtccatcattttttnnnnnnnnnnnnnnnnnnnnnnnnncattAA-GTTGAATTTTTTGAATA--TTTAAC-TTTGTTA-T-AAATA-TGCATTA-A--TGATA---G-AGGTA-ATACTA-GGTCCATCA--TTTTC------T-GGGAAAAAAATTA-TAGGTCAGTG---TTTG-AAAATAAGG--AAG---TT-A-CTGCCCTTG-T--AGAG-AA-GCA--TGGCTAA--TACC--TGAC-AT---TAAGTGCTATAAA-A-TAGGCA-AAAT-----TTT-CTGAAATC-A--AAG-AAAA-AATTGATGATAGAATAA----GA-A-TTTGCATGT-TA-C-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAA-C-AAT--CTTTA--CAAGC--TTTGAA-AATT-CA-AAT-TATTT--AACA-ACAAGTA--TTCAAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTTTGGTT--GC--AAAATTTA--CA-GA-AT-C-AA--CAT-TT--TTTA-GGC--AA-AATTCAG-GGCACATT-G-AATATTTATAACTT-TTTTTTC-AGTC--ATTTAGAT-AA---AAAT-ACTCT-T--AT-CGCGACT-CAGA----TT-TT----A--AAATATT--G-AAAAA--A-TA--T-ATAG--TCAG-TG--T-GAAAT-AAGAAA--G-AAAAGC-GA-G-GTCAA-ATATTG-TCGTA-T--G-C------TGTACA-TCGAT-TTT-TCT-G-GAA---AAGTACGGGGAA--AAC-TGTG-ATT--A---TTTTTA-T--CTGGGTATTTTACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TGA-AA-TGCATTTAATTATACA-AGTATGAT--AA-GGATATCA--CAGTATAC-----A-AAAA-TA-C-ATTATCCAA-TTTT-T-A-AT-G-CTA---TTTCAAGT---TTT-----GCAAA--AAATT--ACA-TCA--T-T--TT-GTGA-TTTTAGTGC-CA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-TTG-AC-A-CC-TT-GAATAGTTAACTT-TTTTTTC-AACGCATG-Gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|5 : CAA-GCTGATTTTTT-AAATA--TCTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---A-GAGTACATA-TA-GGTCACTC----TTTT------CTGGAAAAAA--TTA-TAGGTCAGTT---TT-G-AAC-TAA----A-G---TT-A-CTGCCCTTGGT---GAG-AAAGCA---G-CTAAA----C--TGAACAT---TA-TTGCTA-AAA-A-TAG-CA-CAAG-----TTTTCTGA--TC-A--AAG-GAAA-AAT-GA-GACAGA-TAA---AGA---TTTGCATGT--A-T-CTA-T-AT-TC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-A-TT-CACA-T-T-TTT--AACACA---GTA--TTTCAA--TAGCTAGC-A-------CTTATA-A-TTT--TA-A-TTTT----T--GC--AAAATTTA--CA-GA-ATTC-AA--CCA-TT--TT-A-GGCC-AA-AATT-AG-GGCACAT----GATATTTA-----C-TTTTTTC-CGTC--AT--AGAT-AA---AAAT-ATGCT-T--ATGCG--AAT--AGA----TT-TTT---A--AAATATT--G-AAAAA--GATA--T-ATAGG-TCAG-TG--TTGAAAT--AGAAA--GAAAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C-------GTA-A-T----------------------AGTAC-GG-AA--AACATGTG-GCT--A---TTTTTA-T--C-----ATCT-TCA--A-A--TGTAACA-A--ATT--TTT-AT-A--TTC-AA-TTT-TG--AA-T-CATTTAATTATACA----GTGATATAA-GAAT-TCA--CAGTATAC--------AAA-TACC-A-TATCCAA-TTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----G--AA--AAA-T--ACATTCA----T--TT-GTGA-TTTTAGTGC--A-AAA-AG-AAAAA--AA-T-TCGT-C--AT-A-AT-CA-GATC-CA-A---ATTT-AGGAAC-A-CC-TT-GAATA-TTAAC-T-TTTTTTC-A---CAT--GATA----A--CAGTATGTTCTcctaaccaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaggggcgcgtcgatggtgaacgttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtt
gi|6 : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTATTGAAATATTGCACTATAA-TGATAAGTG-AGGTA-ATA-GA-GTTCCATCAG-TTTTT------CTGGAAAAAAATTCA-TAAG-CAGT----TT---AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAGAAA-GCAATTG-CTAAA-TACCTGTGAA-AT---TA-TTGCTA-AAA-T-TAG-CA-CAAAGATTTTTT-CTGA--TCAA--AAG-AAAA-AAT-GA-GACAGAATAAT--AGATA-TTTGCATGT-TAGTATTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AATAATTTAA--CAAGC--TT-GAAGAATT-AA-A-TAT-TTT--AACA-A---GTA--TTTCAATATAGCTAGCAA--TT-G-CTTAAA-A-TTTGGTC-A-TTTT--GTTTGGCAGAAAATTTAATCA-GAGATTCAAA--CAT-TTTATT-A-GGCC-AACAATTTAG-GCAATATT-G-AATATTTA--AC-T-TTTTTTC-AGTCATAT--AGATCAAT--AAATGATGCT-TAAAT-CG--AAT-CAGA----TT-TTT---AATAAATATTTGA-AAAAA--AAGA--T-ATAGG-TCAGTTGGTTTGAAAT-AAGAAA--ACAAAAAC-GA-GTGT-AA-ATATTT-CG-TATTT-G-C------TGTGTA-T-GAT-TT---TG-G-AAAATGAAGTACGG---A--AACGT----ATT--A----TTTTA-T--C-GGGTATTT-ACATTACATCTGTAAAG-AACATT--TTCAAT-A--TTCGAA-TTT-TGGTAA-TGCATTTAATTATACA-AGTATTATA-AATGGATATCACGCAGTATATACCAGA-AAAA-TACC-ATTATCC-ATTTTT-T---AT-GCCTA---TTTCAGTTGTTTTT-----GCAAA--AAATT--ACATTCATTT-T--TT-GTGACTTTTAGTGC-AA-AAACAG-AACAAGTAG-T-TCGT-C--AT-A-AT-CAGGACC-C--G---AATT-AGG-AC-AGCCGTTGGAATATTTACG-T-TTTTTTC-AA-GATTGTGATA----AATCAATATGTTCTtcatatcaaccattagttacgtgctaaccgtttttcggagcgtagaccctaaatacattgcaaatatattacgcctctcattttagcggggaaaagtgcagcgatgtgaacagttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|7 : TGCAATGCTGAATTTTT-GAATAAATTTAACCTTT-TTA-TGAAATAATGCATTA-AAATGATA---G-AGGTA-ATA-TATGGTCCATCA--TTTTC------T-GGAAAAAA--TTAATAGGTCAGTG---CT-G-AAA-TAAGG--A-G---TTTA-CTACCCTTGGTTAAGAG-AA-GCA--TG-CTAAAATACC--TGAA--T---TA-TTGCTA-AAA-A-TAG-CAACAAAATT--TTT-CAGA--TC-A--AAA-AGCACAAC-GA-GACAGAA-AA---AGA-A-TTTGCATGG-TA-T-T-A-TTATATCTAG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AAAT-CA-T-T-T-TTA--AACA-AAC-GTT--TTTC-A-ATAGCTAGC-A--TT-A-CTTAAA-A-TTT-GTT-A-TTTT--GTT--TC--AAAATTTA--CATGA-ATTC-AA--CAT-TT--TT-AGGGCC-AA-AATCCAGTGGCACATTGG-AATATTTA--ATTT-TTTTTTC-AGTC--ATGAAGAT-AA---AAAT-A-GCT-T--AT-CG---AT-CAGA----TT-TTTTAAA--AAATATT--G-AAAAAATAATA----ATAGG-T-AG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GAGG-GTCAATATATTG-CC-CA-TT-GCC------TGTA-A-T-GATATTTGATG-G-GAA---AAGTACGGA-AA--AAC--GTG-ATT--AATTTTTTTT-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTT-AT-AATTCC-AA-TTT-CG--AA-TGCATTTAAATATACATAGTATGAT--AA-GGATATCA-----TATAC-----A-AAAA-ATCC-ATTGTCC-ATTTTT-T-A-AT-G-CTA---TTT-AG-----TTT-----GCAAA--AAATTA-ACATTCA--T-T--TT-GTGA-TTTTAGTGCAAA-AAA-AG-AACAA--AA-T-TCGTCC--AT-A-GA-CA-GACC-C--A---A-TT-ATG-AC-G-CC-TC--AATATT--AC-T-TTTTTTCAAA-GCATG-GAT-----A--CAATATTTTCTtctatcagacatgcttgacaagtggctattcggtttgcgagcgtagaccgctaaaacatctttgcaaaattattatagcctattttaagcggggaataagtggcgcagttatctcgatggaacagtttcc
gi|8 : TGCAA-GCTGAATTTTT-TAAT---TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TT--CATGT-TA-T-TTA-T-ATATC-AG-TATC-AATAACNNNNNNNNNNNNNNNNNNNNNNNNNATTCAAAAC-AAT--CTTAA--CACGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-AA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTTTG-GGCACATT-G-AATATTTA--ACTT-TTTTTTT-AGTC--AT--AGAT-AA---AGAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-TTAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-TCGTA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-AAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-ATGA-TTTTAGTGC-CA-AAA-AG-ATCAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTACC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCTca
gi|9 : ATC-A-TAAC-------------------------ATTCAAA-C-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-T-T-G-TTC--AACA-A---GTAATTTTCAA-ATA-CGAGC-A--TT-GACTTAAA-AGTCT-GTT---CTGT--GTT--GC-----ATTTA--CA---------AG--TAT-TT--TT-T-GT------AATTCTA-GGC-CTTC-G-----TTTT--ACTT-TTCTTTCGAGTC--AT--AG---AA---AAAT-ATGCT-T--AT-CG---AT-CAGA----TT-TTT---A--AAATATT--G-AAAGA--AATA--TAATAGG-TCAG-TG--
gi|9 : aTCGATCAGATTTTTAAAATATTGAAAGAAATATAA-TAGGTCAGTGATCTC-G----ATAAGGCCA-GGGTCT-ATCTGCCCTatctcgataaggccagggtctatctgccctagttgcgtatgtcggatgtggtttatttttaatggcgggtatttacaacttgtacttatcattattcaaatttatgaaatgcatttaattatacaagttagtaggacatcacagttataaataccaattatccttttttatatcgtcatttcagtttgttcttatatttgtgattttagtgcaaaaaagaaacaaaatatagtataatcccgatctaaatattcgagacccttgtatattcatttttttcaggcatggataacaatatgttc
gi|9 : aatcataacattcaaacaatcttaaccagcttgaaaattcattgttcaacaagtaattttcaaatacgagcattgacttaaaagtctgttctgtgttgcatttacaagtattttttgtaattctaggccttcgttttacttttctttcgagtcatagaaaaatatgcttaATGTG-GTTT-A---TTTTTAATGGC-GGGTATTT-ACA--AC-T-TGTA-C------TT--ATC-ATTA--TTC-AAATTTATG--AAATGCATTTAATTATACA-AGT-TAGT---A-GGACATCA--CAGT-TAT--------AAA-TACCAATTATCC--TTTTT-T-ATATCG-TCA---TTTCAG-----TTT-----G---------TT-----CTTA--TAT--TT-GTGA-TTTTAGTGC-AA-AAA-AGAAACAA--AA-TATAGT----AT-A-ATCCC-GATC-T--AAATATTC-GAG-AC---CC-TT-GTATATTCA---T-TTTTTTC-AG-GCATG-GATA----A--CAATATGTTCagttgcgtatgtcggatgtggtttatttttaatggcgggtatttacaacttgtacttatcattattcaaatttatgaaatgcatttaattatacaagttagtaggacatcacagttataaataccaattatccttttttatatcgtcatttcagtttgttcttatatttgtgattttagtgcaaaaaagaaacaaaatatagtataatcccgatctaaatattcgagacccttgtatattcatttttttcaggcatggataacaatatgttc
blockSeqs : T T AA C G T T T A AGT A C C T GA AAAATATT AA A ATC T A A A CC A GGT T T TA A A AT G AA AC C ATG A T T A G A GATTT T AA A AG A C T T T T TA A G A G T T T A NNNNNNNNNNNNNNNNNNNNNNNNN . AA AT TT T G C AA A A . C CAA AT T A . AG C T G A T TG TG AG AT T G A . . TA A G A C T T G . TAACTT G AT TT C T G . AA G CGA A ATTT . TAA AT TG A AT TA . T GT A . A G G T T C G T . C GAAGTA C . C A TAA CAA ATG GG TT AT T T ATT AA GG T T TT C . AC TG A T AT G A A GT A G T AT T A CG ACCAGA . A A G G T C C . TTGTT TTATA AAGC A TTT . A C AA . C A GT . G C AT A T C G A AA AAT A A AA G G T T A A C T A AT
blockSeqs : . . . . . . A . . . . . . . G TG AA . . . . A G . . . . . A . . . . A TG . . . . . . . . ATT T . . . . . . . A . A . . . . A . . . . . . . . . . . CA . . . . AC . . . . GA . G . . . . . A . . . . . . . T . . . T . . . ATTT . . GA . . . . AA . AA . . . TA . . . . T . . . . . C . . . . . G . . . . T . . . TGA GAA . A . AT . . . T T . . . . . . . . . . . . . A . G . A . A . AG . . A . . . . . . GT . AAA . TA . . . C . . . . . A . . . . . . . A . . . AG . . T . . . . . A .
blockSeqs : . . . . . . . . . . . . . . . CT AA . . . . A G . . . . . . . . . . A . . . . . . . . . T T . . . . . . . T . A . . . . T . . . . . . . . . . . T . . . . . . . . . A . . . . . . . . . . . . . . . . . . . T . . . ACTT . . . . . . . . . A . . . . . . . . T . . . . . . . . . . . . . . . . . . . . TA GG . G . AT . . . C G . . . . . . . . . . . . . . . G . A . A . A . . A . . . . . . . . AAA . T . . . A . . . . . . . . . . . . . A . . . A . . T . . . . . A .
blockSeqs : . . . . . . . . . . . . . . . TT AA . . . . A A . . . . . . . . . . A . . . . . . . . . . . . . . . . . . T . A . . . . T . . . . . . . . . . . A . . . . . . . . . G . . . . . . . . . . . . . . . . . . . C . . . ACTT . . . . . . . . . A . . . . . . . . T . . . . . . . . . . . . . . . . . . . . TT GA . G . GT . . . A . . . . . . . . . . . . . . . . G . A . A . A . . A . . . . . . . . AAA . T . . . A . . . . . . . . . . . . . A . . . A . . G . . . . . A .
blockSeqs : . . . . . . . . . . . . . . . TT AA . . . . A G . . . . . . . . . . T . . . . . . . . . . . . . . . . . . T . A . . . . T . . . . . . . . . . . A . . . . . . . . . G . . . . . . . . . . . . . . . . . . . T . . . ACT . . . . . . . . . A . . . . . . . . T . . . . . . . . . . . . . . . . . . . . TA GG . A . AT . . . A . . . . . . . . . . . . . . . . G . A . A . A . . A . . . . . . . . AAA . T . . . A . . . . . . . . . . . . . . . . . A . . T . . . . . A .
blockSeqs : . . . . . . . . . . . . . . . CT AT . . . . A G . . . . . . . . . . A . . . . . . . . . . . . . . . . . . T . A . . . . T . . . . . . . . . . . A . . . . . . . . . G . . . . . . . . . . . . . . . . . . . C . . . ACT . . . . . . . . . A . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . GA . G . AT . . . A . . . . . . . . . . . . . . . . G . . . A . A . . A . . . . . . . . AA . T . . . C . . . . . . . . . . . . . . . . . A . . T . . . . . A .
blockSeqs : . . . . . . . . . . . . . . . CT AA . . . . A G . . . . . . . . . . A . . . . . . . . . . . . . . . . . . T . A . . . . T . . . . . . . . . . . T . . . . . . . . . A . . . . . . . . . . . . . . . . . . . T . . . AC . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . T . . . A . . . . . . . . . . . . . . . . G . . . A . . . . . . . . . . . . . AA . T . . . A . . . . . . . . . . . . . . . . . A . . T . . . . . A .
blockSeqs : . . . . . . . . . . . . . . . TT TA . . . . A G . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . G . . . . . . . . . . . . . . . . . . . C . . . C . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AA . T . . . C . . . . . . . . . . . . . . . . . G . . T . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . T A . . . . . G . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . C . . . . . . . . A . . . . . . . . . . . . . . . . A . . . . . A . . . . . . . . . . . . . . . . . A . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . T . . . . . . . . . . . . . . . . . .
blockSeqs : .
blockSeqCons : ** CT****** AA ** A* ***** *** A** ** ** ** ** ** ACTT*** *** T*** ** ****** AT ** ** ** *** AAA** ** ** A****
originalCons : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTT------TTGGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTA--ACTT-TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-GAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
finalCons : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA--TTTTTCT------GGAAAAAAAATTA-TAGGTCAGTG---TT-G-AAAATAAGG--A-G---TT-A-CTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGAA--TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTAACTT---TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATAT---ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-GAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GCAAA--AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ACGGATTGTTAATGTGTAGATTGTTATATCAATTGTGATCTTGTGAAAAAAATCGTTATCAAAAGATACCTCCACTGCTATTGCATAGATTCCGCGAATATTTCTAAAGCCTCTTGTGGTTTGTAGATTTAAATCCAATGCTCTTATTTTGTTTTACACGTCCATTATCCTCTTCGAAACTCATCGGCGACGTATAATTGACAGAATGGGTACCGAGGTTACGTTCCGTGCGCAACTAGTCAAAAACAATGACCAGTCACAC
Alignments
lowQualScore : 1 11 22222 1 111 4444444444444444444444444 111 11 1111111 11 111 11 111 111 1 1 1 111111 1 1 111 11 11 1111111 11111 11
lowQualScore : 4 3 99 6 3 3 0 3 7 666 3 3 3 7 3 7 1 4 7 3 3 8 2 3 7 33 3 3 55 3 88 99 3 555 3 3 3 4 4 8 88888 2 55 4 55 4 4 4 4 3 111 666 8 4 4 4 3 4 4 4 0 0000000000000000000000000 0 4 55 55 99 4 4 4 666 4 4 55 4 222 55 4 4 55 555 4 8 4 4 4 11 55 99 55 8 4 4 55 4 55 8 4 4 4 3 4 4 4 5555555 4 55 11 4 222 4 4 22 4 222 4 9999 4 333 66 66 4 66 7777 4 4 66 5 66 0 5 5 5 0 5 0 5 5 5 999999 0 5 5 0 000 6666 888 77 66 77 4 99 777 55 99 4 4 55 4 4 55 66 4 4 22 4 4 4 66 8 1 4 0 99 4 1 66 7777777 4 4 5 0 4 4 4 4 4 777 55555 99999 2 7 88 8888 55 3 3 55 3 3 3 55 3 7 7 55 3 3 3 3 3 55 666 3 3 555 3 3 3 0 4 4 4 4 7 99999 55
lowQualScore : . . .. . . . . . . ... . . . . . . . . . . . . . . . .. . . .. . .. .. . ... . . . . . . ..... . .. . .. . . . . . ... ... . . . . . . . . . ......................... . . .. .. .. . . . ... . . .. . ... .. . . .. ... . . . . . .. .. .. .. . . . .. . .. . . . . . . . . ....... . .. .. . ... . . .. . ... . .... . ... .. .. . .. .... . . .. . .. . . . . . . . . . . ...... . . . . ... .... ... .. .. .. . .. ... .. .. . . .. . . .. .. . . .. . . . .. . . . . .. . . .. ....... . . . . . . . . . ... ..... ..... . . .. .... .. . . .. . . . .. . . . .. . . . . . .. ... . . ... . . . . . . . . . ..... ..
lowQualScore : 0 3 22 7 3 3 9 6 3 444 6 6 6 3 3 3 7 4 3 6 6 8 0 6 3 66 6 6 00 3 00 22 3 888 3 6 6 0 0 0 00000 0 55 0 55 0 0 0 0 4 000 333 0 0 0 0 4 0 4 0 8 0000000000000000000000000 8 0 55 55 55 0 0 0 888 0 0 55 0 555 55 0 0 55 333 0 0 0 0 0 00 55 55 55 0 0 0 55 0 55 0 0 0 0 0 0 0 0 4444444 0 55 00 0 222 4 4 22 4 444 4 4444 4 999 11 11 4 11 0000 4 4 11 0 99 0 0 0 0 0 0 0 0 0 0 444444 0 0 0 0 444 2222 888 22 11 99 0 55 000 22 00 0 0 55 0 0 55 11 4 4 22 4 4 4 11 9 1 4 8 22 4 9 11 4444444 4 4 7 8 0 0 0 0 0 000 55555 11111 1 3 66 5555 00 6 6 66 6 6 6 00 6 3 3 00 6 6 6 6 6 99 444 6 6 555 6 6 2 7 0 0 0 0 3 33333 55
consensus : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA-TTTTTCTGGAAAAAAAATTA-TAGGTCAGTGTT-G-AAAATAAGGA-GTT-ACTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTA--ACTT-TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-GAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GCAAA-AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
Reference ( family-5196 ) : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA-TTTTTCTGGAAAAAAAATTA-TAGGTCAGTGTT-G-AAAATAAGGA-GTT-ACTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTCAG-GGCACATT-G-AATATTTA--ACTT-TTTTTTC-AGTC--AT--AGAT-AA---AAAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-GAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GCAAA-AAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCT
gi|1 : AA-GCTGAATTTTT-GAATAAATTTAACCTTT-TTA-TGAAATAATGCATTA-AAATGATA---G-AGGTA-ATA-TATGGTCCATCA-TTTT-CTGGAAAAAA--TTAATAGGTCAGTGCT-G-AAA-TAAGGA-GTTTACTACCCTTGGTTAAGAG-AA-GCA--TG-CTAAAATACC--TGAA--T---TA-TTGCTA-AAA-A-TAG-CAACAAAATT--TTT-CAGA--TC-A--AAG-AAGA-CAA-GA-GAAAGAATAATAAAGA-ACTTTGCATGGATA-T-ATA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAACTAAT--CTTAA--CCAGCA-TT-GAA-AAAT-CA-A-T-T-TTTTTAACA-A---GTT--CTTTCA-ATAGCTAGC-AATTT-A-CTTAAA-A-TTT-GTT-A-TTTTTTGTT--TC--CAAATTTA--CATGA-ATTC-AAAACATCTT--TT-A-GGCC-AA-AAT-CAG-GGCACATT-GGAATATTTA--ATTTATTTTTTC-AGTC--AT--AGAT-AATAAAAAT-ATGCTCT--AT-CG--AAT-CAGA----TTATTT---A--AAATATT--G-AAAAA--AATAATT-ATAGGATAAG-TG--TTGAAAT-AAGAAAAAG-AAAAAC-GA-G-GTCATTATATGC-CC-CA-TTTG-CC-----TGCA-AAT-GATATTT-ATG-G-GAA---AAGTACGGA-AA--AACA-GTG-ATTTAA---TTTTTT-TTTC-GGGTATTT-ACA--ACAT-TGTAACACA--ATT--TTT-AT-AATTCC-AA-TTT-CG--AA-T-CATTTAATATTACA-AGTATGATT-AA-GGAT-TCA--TCATATAC-----A-AAAAATACC-ATTGTCCAATTTTT-T-A-AT-G-CTAAATTCTCAG-----TTT-----GCAAACAAATTTAACATTCA--T-TAATT-GTGA-ATTTGGCAA-AATAAG-AG-AACAA--AATT-TCGTCC--AT-A-AC----GA-C-C--A---ATT---AG-AC-G-CC-TT-CAATA-TTAAC---TTTTTTC-AA-GCATGAGATATACCA--TATTATGTTC
gi|10 : TGAATTTTT-GAATA--TTTAAC-TGT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-GGGTA-ATA-TA-GATCCATCA-TTTC-CTGGGAAAAAAAT-A-TAGGTCAATGTT-G-AAAATAAAGA-GTT-ACTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TGTC--TGAA-AT---TA-TTGCTA-AAA-T-TAG-CA-CAAA-----TTTTCTGA--TC-A--GAG-AAAA-AAT-GA-GACAGAATAA---ATA-A-TTTGCATGT-TT-T-TTA-TTGTA-A-AG-TATC-A----C-------------------------ATTCAAAAC-AAT--CTGAA--CCAGC--AT-GAA-ACTT-TA-T-T-T-TTT--AACA-T---GTA--TTTGAA-ATAGCTATA-A--TT-A-CTTGAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TTAA-GGCC-AA-AATTTAG-GGCACATT-G-AATATTCA--AC---TTTTTTC-AGTC--AT--AGAT-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaatgcgcaagtcaaatgtgaacagttcctttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctac
gi|11 : TGCAA-TCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-Tg
gi|11 : tatttaaggatgaAATTTTT-G-A-AT-----A---TTTAAC-----TTTTTATAGCAAGCAAATT--ACATTCA--T-T--TT-GTGA-TTTTAGTGC-CA-AAA-AG-GACAA--AA-T-TCGT-C--ATAA-AT-CA-TACCAA--A---ATAT-AGG-AC-A-CA-TT-GAATATTTAAC-TATTTTTTC-AA-GCGTC-GTTA----A--GAATATGTTCTagcaagcaaattacattcattttgtgattttagtgccaaaaaggacaaaattcgtcataaatcataccaaaatataggacacattgaatatttaactattttttcaagcgtcgttaagaatatgttcttcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|13 : tatttaaggatgatgcaatctgTGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA-----AGGTA-ATA-TA-GGTCCATCA-TTTTT-TGG-AAAAAAATTA-TAGGTCAGTGTT-GAAAAATAAGGA-GTT-ACTGCCCTTGGC--AGAG-AA-GCA--TG-CTAAA-TGCC--TGAA-ATATGCA-TTCCTA-AAA-tcatatcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatcacgcagtcgatgtgaacagttccttt
gi|14 : TTTT-GATTA--TTCAAC-TTT-TCA-ATAAATA-TGCATCA-AA-TGATA---G-AGGTA-ATA-TA-GGTTAATTA--TTTTCTGAGAAAAAAATCA-TAAGTCAGAGTT-A-AAAAGAA--A-GTT-ACTGCTCTTGGT--AGAG-AA-GCA--TG-CTAAA-TGTC--TGAA-AT---TA-TTg
gi|15 : G-CAAAT-TACCACTGAA-AT----A-TTCCTA-AAATA-TAG-CA-CAAA-----GT---TGA--TC-AAGAAG-AACA-AAT-GA-GACAAAA-AA---A------TTGCATTTATA-T-TTA--AATATC-Attta
gi|16 : T-----GCAAA-A-ATT--ACATTCA--T-T--TT-GTGA-TTTTAAAGC-AA-AAA-AG-AACAA--AA-T-TCGT-CATAT-A-AT-CA-GACC-CA-A---ATTT-AGA-AC-A-CC-TT-GA
gi|17 : ATG-GATA----A--CAATATGTTCT
gi|18 : A--AAC--GTG-ATT--A---TTTTTT-TT-C-GGGTATTT-ACA--ACAT-TGTAACA-A--tcatatcagacatgttgacagtgctaccgtttctgcgagcg
gi|2 : A-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---GAAAGT--ATA-TA-GGT-CATC---TTTTTTG--AAAAAAATTA-TAGGTCCATGTT-G-AAAATAAGGA-GTT-ACTGCCCTTGGCA-AGAG-AA-GCA--TA-CTAAA-TGCC--TGAA-AT---CA-TTGCTA-AAA-A-T-G-CA-CAAAT----TTT-CTGA--TC-A--AAGAAAAA-AAT-GA-GACAGAAAAA---AGA-A-TTTGCATGC-TA-T-CTAGTTATATC-AGTTATCAAATAAC-------------------------ATTC--AAC-AAT--CTTAAATACAGCTTTT-GAA-AATTCCA-A-T-T-TTT--AACA-A---ATA--TCTAAA-ATAGATAGC-A--TTAG-CTTAAACA-TTT-GTCAA-TTTT--GTT--GCA-AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-A-GGCCAAA-AATTTAG-GGCACATT-G-AATATTTA-----C-TTTTTTC-AGTC--AT--A-AT-AA---AAAT-ATACT-TAAAT-CGA-AAT-CAGAATTTTT-TTT---T--AAATATT--GAAAAAA--AATA--T-ATAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAACGGA-G-GTGAA-ATATTG-CC-T--TT-G-CGAAGTATGTG-A-A-AAT-TTTAATGCA-AAA---AAGTACGGA-AATTACTATGTGTATT--A---TTTTTC-TG-C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATTTGTTC-AT-T--CTC-AA-TTT-TG--AA-TGCATTTAATTAT----------ATA-AA-GGA-ATCA--CAGAATAC-----AGAAAA-TACC-ATTATCCAATTTTTGTGA-AT-G-CTA---TTTCAG-----TTT-----GCAAA-AAATT--ACATTCA--T-T--TTAATGA-TTTTAGTGC-AG-AAA-AG-AACAA--AA-TGTCGT-C--AT-A-AT-CA-GAAC-CAAA---ATTTAAGG-ATAA-TC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GAT-----A--CATTATGTTC
gi|3 : gcCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-CGATA---G-AGGTA-ATA-TT-GGTCCATCA-TTTTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaaatggcgcagtttgatgtgaaagagttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc
gi|3 : -TTTTTTTGAAAAAAAAATTA-TAGGTCAGTGTT-G-AAA-TAAAGA-GTT-ACTGCCCTTGGT--AGAG-AA-GCA--TG-CTAA--TACC--TGAA-AT---TA-TTGCTA-AAA-AATAG-CA-CAAA-----TTTTCTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TTTGCATGT-TA-T-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGG--TT-TGA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-ATTTT-GTC-ATTTTT--GTT--GC--AAAATTTA--CA-GA-ATTC-AA--CAT-TT--TT-G-GACC-AA-AATTTAG-GGCACATT-G-AATATTTA--AC-T-TTTTTTC-A-TC--AT--AGAT-AA---AAAT-ATGCC-T--AT-CG--AATAAAGA----TT-TTTTA-A--AAATACT--G--AAAA--AATA--T-ATAGG-TCAG-TG--TTGAAATAAAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTGCCC-TA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-GAAAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-AGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGA-A-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC--A-AAATT--ACATTCA----T--TT-GTGA-TTTTAAGAA-AA-AAA-AG-AACAA--AA-T-TCGT-C--AT-ATAA-CA-GACC-CA-A---ATTT-AGA-AC-A-CC-TT-GAATATTTAAC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCtnnnnnnnnnnnnnnnnnnnnnnnnncatttttttttgaaaaaaaaattataggtcagtgttgaaataaagagttactgcccttggtagagaagcatgctaatacctgaaattattgctaaaaaatagcacaaattttctgatcaaagaaaaaatgagacagaataaagaatttgcatgttatttattatatcagtatcaataacattcaaaacaatcttaaccaggtttgaaattcaatttttaacaagtatttcaaatagctagcattgcttaaaattttgtcatttttgttgcaaaatttacagaattcaacatttttggaccaaaatttagggcacattgaatatttaactttttttcatcatagataaaaatatgcctatcgaataaagattttttaaaaatactgaaaaaatatataggtcagtgttgaaataaagaaagaaaaacgaggtcaaatattgccctattgctgtaatgattttatggaaaaaagtacgggaaaacatgtgattatttttatcaggtatttacaacattgtaacaaattttcatattcaattttgaatgcatttaattatacaagtatgaaaaggatatcacagtatacaaaaataccattatccaattttttaatgctatttcagtttgcaaaattacattcatttgtgattttaagaaaaaaaagaacaaaattcgtcatataacagacccaaatttagaacaccttgaatatttaactttttttcaagcatggataacaatatgttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|4 : caagctgaatttttgaatatttaactttttatgaaatatgcattaaacgatagaggtaatattggtccatcattttttnnnnnnnnnnnnnnnnnnnnnnnnncattAA-GTTGAATTTTTTGAATA--TTTAAC-TTTGTTA-T-AAATA-TGCATTA-A--TGATA---G-AGGTA-ATACTA-GGTCCATCA-TTTT-CTGGGAAAAAAATTA-TAGGTCAGTGTTTG-AAAATAAGGAAGTT-ACTGCCCTTG-T--AGAG-AA-GCA--TGGCTAA--TACC--TGAC-AT---TAAGTGCTATAAA-A-TAGGCA-AAAT-----TTT-CTGAAATC-A--AAG-AAAA-AATTGATGATAGAATAA----GA-A-TTTGCATGT-TA-C-TTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAA-C-AAT--CTTTA--CAAGC--TTTGAA-AATT-CA-AAT-TATTT--AACA-ACAAGTA--TTCAAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTTTGGTT--GC--AAAATTTA--CA-GA-AT-C-AA--CAT-TT--TTTA-GGC--AA-AATTCAG-GGCACATT-G-AATATTTATAACTT-TTTTTTC-AGTC--ATTTAGAT-AA---AAAT-ACTCT-T--AT-CGCGACT-CAGA----TT-TT----A--AAATATT--G-AAAAA--A-TA--T-ATAG--TCAG-TG--T-GAAAT-AAGAAA--G-AAAAGC-GA-G-GTCAA-ATATTG-TCGTA-T--G-C------TGTACA-TCGAT-TTT-TCT-G-GAA---AAGTACGGGGAA--AAC-TGTG-ATT--A---TTTTTA-T--CTGGGTATTTTACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AAATGCATTTAATTATACA-AGTATGATA-A--GGATATCA--CAGTATAC-----A-AAAA-TAC--ATTATCCAA-TTTT-T-A-AT-G-CTA---TTTCAAGT---TTT-----GCAAA-AAATT--ACA-TCA--T-T--TT-GTGA-TTTTAGTGC-CA-AAA-AG-AACAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-TTG-AC-A-CC-TT-GAATAGTTAACTT-TTTTTTC-AACGCATG-Gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggggaaaatggtgcagtcgatgtgaacagtttcttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcta
gi|5 : CAA-GCTGATTTTTT-AAATA--TCTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---A-GAGTACATA-TA-GGTCACTC---TTTTCTGGAAAAAA--TTA-TAGGTCAGTTTT-G-AAC-TAA--A-GTT-ACTGCCCTTGGT---GAG-AAAGCA---G-CTAAA----C--TGAACAT---TA-TTGCTA-AAA-A-TAG-CA-CAAG-----TTTTCTGA--TC-A--AAG-GAAA-AAT-GA-GACAGA-TAA---AGA---TTTGCATGT--A-T-CTA-T-AT-TC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-A-TT-CACA-T-T-TTT--AACACA---GTA--TTTCAA--TAGCTAGC-A-------CTTATA-A-TTT--TA-A-TTTT----T--GC--AAAATTTA--CA-GA-ATTC-AA--CCA-TT--TT-A-GGCC-AA-AATT-AG-GGCACAT----GATATTTA-----C-TTTTTTC-CGTC--AT--AGAT-AA---AAAT-ATGCT-T--ATGCG--AAT--AGA----TT-TTT---A--AAATATT--G-AAAAA--GATA--T-ATAGG-TCAG-TG--TTGAAAT--AGAAA--GAAAAAAC-GA-G-GTCAA-ATATTG-CC-TA-TT-G-C-------GTA-A-T----------------------AGTAC-GG-AA--AACATGTG-GCT--A---TTTTTA-T--C-----ATCT-TCA--A-A--TGTAACA-A--ATT--TTT-AT-A--TTC-AA-TTT-TG--AA-T-CATTTAATTATACA----GTGATATAA-GAAT-TCA--CAGTATAC--------AAA-TACC-A-TATCCAA-TTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----G-AAA-AA--T--ACATTCA----T--TT-GTGA-TTTTAGTGC--A-AAA-AG-AAAAA--AA-T-TCGT-C--AT-A-AT-CA-GATC-CA-A---ATTT-AGGAAC-A-CC-TT-GAATA-TTAAC-T-TTTTTTC-A---CAT--GATA----A--CAGTATGTTCTcctaaccaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcgggaaaaggggcgcgtcgatggtgaacgttccttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagtt
gi|6 : TGCAA-GCTGAATTTTT-GAATA--TTTAAC-TTT-TTATTGAAATATTGCACTATAA-TGATAAGTG-AGGTA-ATA-GA-GTTCCATCAGTTTTTCTGGAAAAAAATTCA-TAAG-CAGT-TT---AAAATAAGGA-GTT-ACTGCCCTTGGT--AGAGAAA-GCAATTG-CTAAA-TACCTGTGAA-AT---TA-TTGCTA-AAA-T-TAG-CA-CAAAGATTTTTT-CTGA--TCAA--AAG-AAAA-AAT-GA-GACAGAATAAT--AGATA-TTTGCATGT-TAGTATTA-TTATATC-AG-TATC-AATAAC-------------------------ATTCAAAAC-AATAATTTAA--CAAGC--TT-GAAGAATT-AA-A-TAT-TTT--AACA-A---GTA--TTTCAATATAGCTAGCAA--TT-G-CTTAAA-A-TTTGGTC-A-TTTT--GTTTGGCAGAAAATTTAATCA-GAGATTCAAA--CAT-TTTATT-A-GGCC-AACAATTTAG-GCAATATT-G-AATATTTA--AC-T-TTTTTTC-AGTCATAT--AGATCAAT--AAATGATGCT-TAAAT-CG--AAT-CAGA----TT-TTT---AATAAATATTTGA-AAAAA--AAGA--T-ATAGG-TCAGTTGGTTTGAAAT-AAGAAA--ACAAAAAC-GA-GTGT-AA-ATATTT-CG-TATTT-G-C------TGTGTA-T-GAT-TT---TG-G-AAAATGAAGTACGG---A--AACGT----ATT--A----TTTTA-T--C-GGGTATTT-ACATTACATCTGTAAAG-AACATT--TTCAAT-A--TTCGAA-TTT-TGGTAA-TGCATTTAATTATACA-AGTATTATA-AATGGATATCACGCAGTATATACCAGA-AAAA-TACC-ATTATCC-ATTTTT-T---AT-GCCTA---TTTCAGTTGTTTTT-----GCAAA-AAATT--ACATTCATTT-T--TT-GTGACTTTTAGTGC-AA-AAACAG-AACAAGTAG-T-TCGT-C--AT-A-AT-CAGGACC-C--G---AATT-AGG-AC-AGCCGTTGGAATATTTACG-T-TTTTTTC-AA-GATTGTGATA----AATCAATATGTTCTtcatatcaaccattagttacgtgctaaccgtttttcggagcgtagaccctaaatacattgcaaatatattacgcctctcattttagcggggaaaagtgcagcgatgtgaacagttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
gi|7 : TGCAATGCTGAATTTTT-GAATAAATTTAACCTTT-TTA-TGAAATAATGCATTA-AAATGATA---G-AGGTA-ATA-TATGGTCCATCA-TTTT-CTGGAAAAAA--TTAATAGGTCAGTGCT-G-AAA-TAAGGA-GTTTACTACCCTTGGTTAAGAG-AA-GCA--TG-CTAAAATACC--TGAA--T---TA-TTGCTA-AAA-A-TAG-CAACAAAATT--TTT-CAGA--TC-A--AAA-AGCACAAC-GA-GACAGAA-AA---AGA-A-TTTGCATGG-TA-T-T-A-TTATATCTAG-TATC-AATAAC-------------------------ATTCAAAAC-AAT--CTTAA--CCAGC--TT-GAA-AAAT-CA-T-T-T-TTA--AACA-AAC-GTT--TTTC-A-ATAGCTAGC-A--TT-A-CTTAAA-A-TTT-GTT-A-TTTT--GTT--TC--AAAATTTA--CATGA-ATTC-AA--CAT-TT--TT-AGGGCC-AA-AATCCAGTGGCACATTGG-AATATTTA--ATTT-TTTTTTC-AGTC--ATGAAGAT-AA---AAAT-A-GCT-T--AT-CG---AT-CAGA----TT-TTTTAAA--AAATATT--G-AAAAAATAATA----ATAGG-T-AG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GAGG-GTCAATATATTG-CC-CA-TT-GCC------TGTA-A-T-GATATTTGATG-G-GAA---AAGTACGGA-AA--AAC--GTG-ATT--AATTTTTTTT-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTT-AT-AATTCC-AA-TTT-CG--AA-TGCATTTAAATATACATAGTATGAT--AA-GGATATCA-----TATAC-----A-AAAA-ATCC-ATTGTCC-ATTTTT-T-A-AT-G-CTA---TTT-AG-----TTT-----GCAAA-AAATTA-ACATTCA--T-T--TT-GTGA-TTTTAGTGCAAA-AAA-AG-AACAA--AA-T-TCGTCC--AT-A-GA-CA-GACC-C--A---A-TT-ATG-AC-G-CC-TC--AATATT--AC-T-TTTTTTCAAA-GCATG-GAT-----A--CAATATTTTCTtctatcagacatgcttgacaagtggctattcggtttgcgagcgtagaccgctaaaacatctttgcaaaattattatagcctattttaagcggggaataagtggcgcagttatctcgatggaacagtttcc
gi|8 : TGCAA-GCTGAATTTTT-TAAT---TTTAAC-TTT-TTA-TGAAATA-TGCATTA-AA-TGATA---G-AGGTA-ATA-TA-GGTCCATCA-TTTTTTTGGAAAAAAAATTA-TAGGTCAGTGTT-G-AAAATAAGGA-GTT-ACTGCCCTTGGT--AGAG-AA-GCA--TG-CTAAA-TACC--TGAA-AT---TA-TTGCTA-AAA-A-TAG-CA-CAAA-----TTT-CTGA--TC-A--AAG-AAAA-AAT-GA-GACAGAATAA---AGA-A-TT--CATGT-TA-T-TTA-T-ATATC-AG-TATC-AATAACNNNNNNNNNNNNNNNNNNNNNNNNNATTCAAAAC-AAT--CTTAA--CACGC--TT-GAA-AATT-CA-A-T-T-TTT--AACA-A---GTA--TTTCAA-ATAGCTAGC-A--TT-G-CTTAAA-A-TTT-GTC-A-TTTT--GTT--GC--AAAATTTA--CA-AA-ATTC-AA--CAT-TT--TT-A-GGCC-AA-AATTTTG-GGCACATT-G-AATATTTA--ACTT-TTTTTTT-AGTC--AT--AGAT-AA---AGAT-ATGCT-T--AT-CG--AAT-CAGA----TT-TTT---A--AAATATT--G-AAAAA--AATA--T-TTAGG-TCAG-TG--TTGAAAT-AAGAAA--G-AAAAAC-GA-G-GTCAA-ATATTG-TCGTA-TT-G-C------TGTA-A-T-GAT-TTT-ATG-G-AAA---AAGTACGGG-AA--AACATGTG-ATT--A---TTTTTA-T--C-GGGTATTT-ACA--ACAT-TGTAACA-A--ATT--TTC-AT-A--TTC-AA-TTT-TG--AA-TGCATTTAATTATACA-AGTATGATA-AA-GGATATCA--CAGTATAC-----A-AAAA-TACC-ATTATCCAATTTTT-T-A-AT-G-CTA---TTTCAG-----TTT-----GC-AA-AAATT--ACATTCA--T-T--TT-ATGA-TTTTAGTGC-CA-AAA-AG-ATCAA--AA-T-TCGT-C--AT-A-AT-CA-GACC-C--A---ATTT-AGG-AC-A-CC-TT-GAATATTTACC-T-TTTTTTC-AA-GCATG-GATA----A--CAATATGTTCTca
gi|9 : ATC-A-TAAC-------------------------ATTCAAA-C-AAT--CTTAA--CCAGC--TT-GAA-AATT-CA-T-T-G-TTC--AACA-A---GTAATTTTCAA-ATA-CGAGC-A--TT-GACTTAAA-AGTCT-GTT---CTGT--GTT--GC-----ATTTA--CA---------AG--TAT-TT--TT-T-GT------AATTCTA-GGC-CTTC-G-----TTTT--ACTT-TTCTTTCGAGTC--AT--AG---AA---AAAT-ATGCT-T--AT-CG---AT-CAGA----TT-TTT---A--AAATATT--G-AAAGA--AATA--TAATAGG-TCAG-TG--
gi|9 : aATGTG-GTTT-A---TTTTTAATGGC-GGGTATTT-ACA--AC-T-TGTA-C------TT--ATC-ATTA--TTC-AAATTTATG--AAATGCATTTAATTATACA-AGT-TAGT---A-GGACATCA--CAGT-TAT--------AAA-TACCAATTATCC--TTTTT-T-ATATCG-TCA---TTTCAG-----TTT-----G--------TT-----CTTA--TAT--TT-GTGA-TTTTAGTGC-AA-AAA-AGAAACAA--AA-TATAGT----AT-A-ATCCC-GATC-T--AAATATTC-GAG-AC---CC-TT-GTATATTCA---T-TTTTTTC-AG-GCATG-GATA----A--CAATATGTTCatctcgataaggccagggtctatctgccctagttgcgtatgtcggatgtggtttatttttaatggcgggtatttacaacttgtacttatcattattcaaatttatgaaatgcatttaattatacaagttagtaggacatcacagttataaataccaattatccttttttatatcgtcatttcagtttgttcttatatttgtgattttagtgcaaaaaagaaacaaaatatagtataatcccgatctaaatattcgagacccttgtatattcatttttttcaggcatggataacaatatgttc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): ACGGATTGTTAATGTGTAGATTGTTATATCAATTGTGATCTTGTGAAAAAAATCGTTATCAAAAGATACCTCCACTGCTATTGCATAGATTCCGCGAATATTTCTAAAGCCTCTTGTGGTTTGTAGATTTAAATCCAATGCTCTTATTTTGTTTTACACGTCCATTATCCTCTTCGAAACTCATCGGCGACGTATAATTGACAGAATGGGTACCGAGGTTACGTTCCGTGCGCAACTAGTCAAAAACAATGACCAGTCACAC