lowQualScore : 11111111111111111111111111111111111111111111
lowQualScore : 1111 888888888888888888888888888888888 11111 111111111111 1111111 00000000000000000000000000000000000000000000 111 4444444444444444444444444444444444 1 11111 2222222222222222 11111111111 2222222222222 333333 111 1
lowQualScore : 7777 8 99 222222222222222222222222222222222 33333 66 111111111111 8888888 4 44444444444444444444444444444444444444444444 222 4 8 0000000000000000000000000000000000 2 4 4 00000 6666666666666666 1 4 33333333333 00 9999999999999 1 5 5 3 222222 111 5 2
lowQualScore : .... . .. ................................. ..... .. ............ ....... . ............................................ ... . . .................................. . . . ..... ................ . . ........... .. ............. . . . . ...... ... . .
lowQualScore : 0000 0 22 888888888888888888888888888888888 00000 11 999999999999 3333333 4 22222222222222222222222222222222222222222222 222 4 9 5555555555555555555555555555555555 2 4 4 00000 0000000000000000 1 4 99999999999 44 0000000000000 4 0 0 5 555555 888 0 5
consensus : AATCGTGTG----T-GTAT--GTATGTGTGTGT------AG-GTGGT---T-GG------------GGGG----TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTT----------------CAA---T----A-----T---A-----CC---ACT-ATTT-AGGAAG-----G-A-----A----GAAG--CAA-CTA-TAGATCAAACTTT-G-CT--TGCAAA-A------ATNACC--AACT-T---T----G--TGATTATAACAGAAATA-G---TG-CGTTGTC-GGAAGA-GAGGGGCNA-C-C--TCTCCC-TCTTTCTCTCTCCCACGTGTNTGA
Reference ( gi|8 ) : AATCATGTG----T-GTAT--GTATGTGTGTGT------AG-GTGGT---TTGG------------GGGG----TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTC----------------CAA---T----A-----T---A-----CC---ACT-ATTT-AGGAGG-----G-A-----A----GAAG--C---CTT-TAGAGCAAACTTT-G-CT--TACAAA-A------ATTACC--AACT-T---T----G--TGATTATAACAGAAATA-G---TA-CGTTGTC-GGAAGA-GAGGGGCTA-C-C--TCTCTC-TATTTCTCTCTCCCACGTGTGTGA
gi|4 : AATTATGTG----T-GTAT--GTATGTGTGTGTGAGTGGAG-GTGGT---TGGG------------GGGGGGGGTCCTTCGAT--T-----TAAA---TCAC-C----G-TTCCTC----------------CA----T----A---------A-----CC---AC--ATTT-AGGAAG-----ACA-----G----GAAG--CAAACTCATAGATCAAACTTT-CTCT--TGCAAA-A------ATTCAC--AACT-T---T----G--TGATTATAACAGAATTA-G---TG-CGTTGTC-GGAAGA-GAGGGGCTATC-C--TCTCTCTTCTTTCTCTCT-CCACGTGTTTGA
gi|9 : ggggcgggcggcgccgggttctaatgttaaaattctgagagcaaaaagaacaacaaatataacaaatatcaaagctctaAATCGTGTGGGCAT-ACAT--GTATGTGTGTTT------AG-----------GG------------GGTG----TCCTTCATT--TCCGAGTCAA---TTAA-CCG--G-TTCCTT------------------A---T----A-----T---ATTTCGCC---ATT-ATTT-AAGAAA-----G-A-----AGT--GGAG--CAATCTA-TAGATCAAACTTT-C-CT--------------------CT----CC-T---C----G--TAA-TAT--CAGATATA-GTACTA-CGTTGTT-GGAAGA-AA--AGCAA-CAC--TCTCTC-Ttga
gi|6 : taATGTG----T-GTATAAGTATGTGTGTGT------AGTGTGGTGGGTTGG------------GGGG----TCCTTCAAT--T-----TAAAATCTCAT-C----G-TTC-TC----------------CAA---T----A-----T---AG----CCG--ACT-ATTT-AGG--G-----G-A-----A-----AAG--C---CTT-TAGAGCAAACTTT-G-CT--TA-AAA-A------ATC-CC--AACT-T---T----G--TGATTATAACAGAAATACG---TAGCGTTGTC-GGAAGA-GAGGGGCTA---C--TCTTCC-TATTTCTCTCTCCCACGTGTGccgtt
gi|7 : TGTC----T-GTCT--GTGTGTGTGTGT------GG-G-GG------GG------------GGGG------CTTCAAT--T-----TAAA---TCAT-C----G-TTCCTTGAGTTTTATAACATTTCGA---T----A-----TTTCA-----CT---ACT-ATTT-AGGAAA-----G-A-----A----GAGGAACAAGCTA-AAGATAAAACTTT-G-CT--TGTAAA-A------AAAACCCCAACT-T---TCCTTG--TGATTATAATAG---------------TTATC-GAAAGA-AAGGGGCGA-C-AAATCTCCC-CCTCTCTCTCTatgatttctctctctctcttccgagtagttgatttacacaaaattatt
gi|1 : cGTG----TAGTAT--GTATTTGTGTGT-------T-GTGGG---TTGGTGGGGGGGGGGGGGGG----TCCTTCAATATT-----TAAA---TCAT-CTTACG-TTCCTC----------------CAA---T----ATACATT---A-----CC---ACTAATTT-AGGAAA-----G-AG----A----GGAA--CAAACTA-TAGATCAAACTAT-G-CT--TGCAAA-ATAT---GTGACC--AACT-T---T----GT-TGATTATAA---AAACATG---TG-TGCT-TC-GGAAGA-GAGGttttctctttctttctttcgtgcttggtaattat
gi|15 : acatgcattttgtacttaactctagtcaactctcatataaacaaaggtttagttttagtagattttatatagaacctaatcgttactagagagagtccatttagatacgtcaactggtggttcagagggggtcgtgttgacacaaatctgattgtggtttattaatctgccggcaatatgatccttataccaagacatttcggagtgatgatagagttggtgaagaaataaagtaatatcaatagacacatttaaaaatagtaaagtcaacattgaaaacacacagggacaaattgtttatctcaacaaagggagggaggtgggggggaggctcgggcccggcagatgtttaaggaattgctgactacaaaggcattcttgaagagcaaacaatatacaggcaaacaatagtcaattacctaaactcgttgtaT--GTGTGTGTGTGT------------GT---T-----------------GG----CCCTTCAAC--C-----TGAT---TTATAA----G-TTCCTT----------------AAACTTT----T-----C---A-----TC---ATT-ATTTCAGGAAG-----T-AG----A----GGAG--C---
gi|14 : ------------GGGG------CTTCAAT--T-----TAAA---TCAT-C----G-TTCCTTGAATTTTA--------CAA---C----A-----TTTCA-----CC---ACT-ATTTGAGGAAG-----A-A-----AAGTGGAAA--C---CTA-TAGATCAAACTTA-G-CT--TGTAAA-A------ATAACC--AACT-T---T----G--TGACTATAaacttatacatgcatatcaaacttt
gi|10 : GGT----TCCTTAAAT--T-----TTA-----CA-------A-TTCC------------------CAA---T----A-----T---T-----TCCCAACT-ATTT-AGTAAATATACG-G-----A----GAAA--C---CTA-TAGATCAAATTTTTG-CTCGTACAAA-ATAGCTAATTAAA--AA---T---T----GATTGATTATAACAG---TA------A-GGTTGTTAAGAAGA-GAGG
gi|12 : cttcaagtcattGG----TCCTTCAAT--T-------------CAT-T----GGTTCCTTAATAAATTA-------CAA---TTACAA-----T---ATTTCTCC---ACT-ATTT-AGTAAA-----G-ATACGGA----GTAA--C---TTA-TAGATCAAATTTT-G-CG--TATGATTG------ATTATG--AA-T-T---C----A--TAACTGTAATACTAA---G---TA-CGTTGTC-GGAAGA-AAGGa
gi|13 : GG-----G-A-----A----CCAG--C---CTA-TAGATCGAACTTT-G-CA--TGTAAA-T------GTAACC--ATCTATGTAT----G--TAATGGTGAC-GAAAAA-G---TG-CGTATTC-GAAAAATGAGG
5 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|2 ): TTTTTGCAGTTACTGCCCCTTACATCGTGTAATGTGTACCATAAAGGCTGGCGTGCTAATCGATGGGGTCCTAAGCATCAGATAAAATAAGTAACAAATAGAGTATTGTAAGCTTTACGGTACTAAAACATTTATTATAATTTGAATTTTCACAGATTTGTATATAACTCTCATAACAATAACAAGGTTTGTTTAGTAGATTTATATAGAAAAATTTCTAGATGAGCACATTTCGTCAATTTGAAGTGATAGGGAAAGGGGGGGGGGGGGGGTGTGACTAAATTTGATGTTACATCTATAATTCTGCCAATTATATTAATACCAAGAATTTCAGGAGAAATTTGAAAAAAAAAAAATAATATAGACATTTAAAAATAAAAAATCATTGAAAACAAACAGGACACTTGTATTCAATAAAGGAAGGAGAGAGGG
Unaligned ( gi|3 ): TTTGCAGTTACTGCCCTTACATCGGAAGTAGGGGGCGTGCTAATCGATGGGGTCCAAAGCATTAGATAAAATAGTAACAAATAGAGTATTGTAAAGCTTATGGTACTAACACATGTATTATGTTCGGAATTTTAACAGATTATATTATAACTATTATCATAACATGGTTTAGTTTAGTAGATTTTATGGAGAAAAAACAATCAATAAATGCACATTTCGTAATTTGAAGTGATAGGAAAGGGGGGAGGGGCAAATTGATGTTTATAATTCTGCCAATATGAATTATACCAAGAATTTCAGGAGTAATTTGAAAAAAAAAAGATATTAATAGACATTTAAAAATAATATCACATTGAAATATATCATGTAATTAACAGAAACATCGTTATTCAACAAAGGACTTAGGAGGGA
Unaligned ( gi|5 ): CCAGATAAAATAGCAGTAACAAATAAAGTACAAATGTACTGTAAAATTTACGGTACTAAAATCTCTATCATGTGCTGAATTTTTTTAAAACCAGTTGTATCATATCTCTCATCAAATAAAGTTTAGTATATTAGATTTTATGGAGAACACTTTGTATATCGTCAAATTTGAAGGGACGGGGAAGGGTGGTAGTATTGATGTTAAAGTAATACCAAACATGTCAGGAGTAATTTGTAAAAAAAAAAAAAATAAATAAAAA
Unaligned ( gi|11 ): ATTGGCTACAGTTTTTAGTTACACCCCTTACACCGGAAGTACGGGGCGCGCTTACCTTTGCAATCCTAGACGTCACATAGATACATGTAATAGTAGAATTACTTTGCGGCAGTACACATGTATTTGTCAATTTTCACAAACACATTTTGTTA
Unaligned ( gi|16 ): GGGTCCTTCAATTTATTGGTTCCTTAAATCTTACAATTACAATATCTCTCCACT
Alignments
lowQualScore : 1111 555555555555555555555 222222222 11111 111111 888888888888888888888888888888888888888888888888 11111111111111 222 11111111111111111 111111111111111 111111
lowQualScore : 0 4444 6 77 77 5 111111111111111111111 666666666 55 00000 7777 444444 4 111111111111111111111111111111111111111111111111 4 8 99999999999999 55 999 3 7 666 666 3 4 77 4 777 44 55 44444444444444444 55 2 2 999999999999999 0 4 1 777777 6 3 2 1
lowQualScore : . .... . .. .. . ..................... ......... .. ..... .... ...... . ................................................ . . .............. .. ... . . ... ... . . .. . ... .. .. ................. .. . . ............... . . . ...... . . . .
lowQualScore : 7 2222 7 99 99 7 111111111111111111111 888888888 55 00000 9999 666666 0 777777777777777777777777777777777777777777777777 0 0 99999999999999 00 777 6 3 444 444 6 0 11 0 000 66 55 11111111111111111 55 0 2 999999999999999 1 4 0 777777 7 2 5 0
consensus : AATCGTGTG----T-GTAT--GTAT--GTGTGT-GT------AG----GT-GG-TT-GGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTC----------------CAA---T----AT---A-----C-----C---ACTA-TTT-AGGAAG-----G-A-A----GAAG--CAA-C-T-ATA---G---ATCAAA-CTTTG-CTTGCA-AAA---ATNACC--AACT-----T---T----G--TGA--TTATAACAGAAAT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCNA-C-C--TCTC-CCTCTTTCTCTCTCCCACGTGTGTGA
Reference ( family-4805 ) : AATCGTGTG----T-GTAT--GTAT--GTGTGT-GT------AG----GT-GG-TT-GGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTT----------------CAA---T----AT---A-----C-----C---ACTA-TTT-AGGAAG-----G-A-A----GAAG--CAA-C-T-ATA---G---ATCAAA-CTTTG-CTTGCA-AAA---ATNACC--AACT-----T---T----G--TGA--TTATAACAGAAAT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCNA-C-C--TCTC-CCTCTTTCTCTCTCCCACGTGTNTGA
gi|1 : GTG----TAGTAT--GTATTTGTGTGTTGT------GG----GTTGG-TG-GGGGGGGGGGGGGGTCCTTCAATATT-----TAAA---TCAT-CTTACG-TTCCTC----------------CAA---T----AT---A-----CATTACC---ACTAATTT-AGGAAA-----G-AGA----GGAA--CAAAC-T-ATA---G---ATCAAA-CTATG-CTTGCA-AAATATGTGACC--AACT-----T---T----GT-TGA--TTATAA---AAAC----ATG---T-GTGCT-TC-GGAAGAGAGG
gi|10 : acatgcattttgtacttaactctagtcaactctcatataaacaaaggtttagttttagtagattttatatagaacctaatcgttactagagagagtccatttagatacgtcaactggtggttcagagggggtcgtgttgacacaaatctgattgtggtttattaatctgccggcaatatgatccttataccaagacatttcggagtgatgatagagttggtgaagaaataaagtaatatcaatagacacatttaaaaatagtaaagtcaacattgaaaacacacagggacaaattgtttatctcaacaaagggagggaggtgggggggaggctcgggcccggcagatgtttaaggaattgctgactacaaaggcattcttgaagagcaaacaatatacaggcaaacaatagtcaattacctaaactcgttgtaGGT--------TCCTTAAAT--T-----TTA-----CA-------A-TTCC------------------CAA---T----AT---T-----T-----CCCAACTA-TTT-AGTAAATATACG-G-A----GAAA--C---C-T-ATA---G---ATCAAATTTTTG-CTCGTACAAA---ATAGCT--AATTAAAAAT---T----GATTGA--TTATAACAGTA------A-G-------GTTGTTAAGAAGAGAGG
gi|12 : cttcaagtcattGG--------TCCTTCAAT--T-------------CAT-T----GGTTCCTTAATAAATTA-------CAA---TTACAAT---ATTTCTC-----C---ACTA-TTT-AGTAAA-----G-ATAC---GGAG--TAA-C-TTATA---G---ATCAAA-TTTTG-CGT----------ATGATT--GA-------T---T----A--TGAATTCATAACTGTAATACTAA-G---T-ACGTTGTC-GGAAGAAAGGa
gi|13 : G-----G-A-A----CCAG--C---C-T-ATA---G---ATCGAA-CTTTG-CATGTA-AAT---GTAACC--ATCTA----TGTAT----G--TAA--TGGTGAC-GAAAA----A-G---T-GCGTATTC-GAAAAATGAGGACAG-T-C--TCCC-C
gi|14 : gGGGG----------CTTCAAT--T-----TAAA---TCAT-C----G-TTCCTTGAATTTTA--------CAA---C----ATTTCA-----C-----C---ACTA-TTTGAGGAAG-----A-A-AAGTGGAAA--C---C-T-ATA---G---ATCAAA-CTTAG-CTTGTA-AAA---ATAACC--AACT-----T---T----G--TGA--CTATAagatcccccgttgttacgtgt
gi|15 : TGT--GTGT--GTGTGT-GT-------------T-----------GG--------CCCTTCAAC--C-----TGAT---TTATAA----G-TTCCTT----------------AAACTTT----TC---A-----T-----C---ATTA-TTTCAGGAAG-----T-AGA----GGAG--CAA-CTT-ATACATGCATATCAAA-CTTT
gi|4 : AATTATGTG----T-GTAT--GTAT--GTGTGT-GTGAGTGGAG----GT-GG-TT-GGGGGGGGGGG---TCCTTCGAT--T-----TAAA---TCAC-C----G-TTCCTC----------------CA----T----A----A-----C-----C---AC-A-TTT-AGGAAG-----ACA-G----GAAG--CAAAC-TCATA---G---ATCAAA-CTTTCTCTTGCA-AAA---ATTCAC--AACT-----T---T----G--TGA--TTATAACAGAATT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCTATC-C--TCTCTCTTCTTTCTCTCT-CCACGTGTTTGA
gi|6 : ggggcgggcggcgccgggttctaatgttaaaattctgagagcaaaaagaacaacaaatataacaaatatcaaagctctaTGTG----T-GTATAAGTAT--GTGTGT-GT------AGTGTGGT-GGGTT-GGGGGG--------TCCTTCAAT--T-----TAAAATCTCAT-C----G-TTC-TC----------------CAA---T----AT---AG----C-----CG--ACTA-TTT-AGG--G-----G-A-A-----AAG--C---C-T-TTA---G---AGCAAA-CTTTG-CTTA-A-AAA---ATC-CC--AACT-----T---T----G--TGA--TTATAACAGAAAT----ACG---TAGCGTTGTC-GGAAGAGAGGGGCTA---C--TCTT-CCTATTTCTCTCTCCCACGTGTGtga
gi|7 : aTGTC----T-GTCT--GTGT--GTGTGT-GT------GG----G--GG----GGGGGG----------CTTCAAT--T-----TAAA---TCAT-C----G-TTCCTTGAGTTTTATAACATTTCGA---T----ATTTCA-----C-----T---ACTA-TTT-AGGAAA-----G-A-A----GAGGAACAAGC-T-AAA---G---ATAAAA-CTTTG-CTTGTA-AAA---AAAACCCCAACT-----T---TCCTTG--TGA--TTATAATAG-------------------TTATC-GAAAGAAAGGGGCGA-C-AAATCTC-CCCCT--CTCTCTCatgatttctctctctctcttccgagtagttgatttacacaaaattatt
gi|8 : cAATCATGTG----T-GTAT--GTAT--GTGTGT-GT------AG----GT-GG-TTTGGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTC----------------CAA---T----AT---A-----C-----C---ACTA-TTT-AGGAGG-----G-A-A----GAAG--C---C-T-TTA---G---AGCAAA-CTTTG-CTTACA-AAA---ATTACC--AACT-----T---T----G--TGA--TTATAACAGAAAT----A-G---T-ACGTTGTC-GGAAGAGAGGGGCTA-C-C--TCTC-TCTATTTCTCTCTCCCACGTGTGTGAtttttctctttctttctttcgtgcttggtaattat
gi|9 : AATCGTGTGGGCAT-ACAT--GTAT--GTGTGT-TT------AG-------------GGGGTG--------TCCTTCATT--TCCGAGTCAA---TTAA-CCG--G-TTCCTT------------------A---T----AT---ATTTCGC-----C---ATTA-TTT-AAGAAA-----G-A-AGT--GGAG--CAATC-T-ATA---G---ATCAAA-CTTTC-CT---------------CT----CC-----T---C----G--TAA---TAT--CAGATAT----A-GTACT-ACGTTGTT-GGAAGAAA--AGCAA-CAC--TCTC-TCTC
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|2 ): TTTTTGCAGTTACTGCCCCTTACATCGTGTAATGTGTACCATAAAGGCTGGCGTGCTAATCGATGGGGTCCTAAGCATCAGATAAAATAAGTAACAAATAGAGTATTGTAAGCTTTACGGTACTAAAACATTTATTATAATTTGAATTTTCACAGATTTGTATATAACTCTCATAACAATAACAAGGTTTGTTTAGTAGATTTATATAGAAAAATTTCTAGATGAGCACATTTCGTCAATTTGAAGTGATAGGGAAAGGGGGGGGGGGGGGGTGTGACTAAATTTGATGTTACATCTATAATTCTGCCAATTATATTAATACCAAGAATTTCAGGAGAAATTTGAAAAAAAAAAAATAATATAGACATTTAAAAATAAAAAATCATTGAAAACAAACAGGACACTTGTATTCAATAAAGGAAGGAGAGAGGG
Unaligned ( gi|3 ): TTTGCAGTTACTGCCCTTACATCGGAAGTAGGGGGCGTGCTAATCGATGGGGTCCAAAGCATTAGATAAAATAGTAACAAATAGAGTATTGTAAAGCTTATGGTACTAACACATGTATTATGTTCGGAATTTTAACAGATTATATTATAACTATTATCATAACATGGTTTAGTTTAGTAGATTTTATGGAGAAAAAACAATCAATAAATGCACATTTCGTAATTTGAAGTGATAGGAAAGGGGGGAGGGGCAAATTGATGTTTATAATTCTGCCAATATGAATTATACCAAGAATTTCAGGAGTAATTTGAAAAAAAAAAGATATTAATAGACATTTAAAAATAATATCACATTGAAATATATCATGTAATTAACAGAAACATCGTTATTCAACAAAGGACTTAGGAGGGA
Unaligned ( gi|5 ): CCAGATAAAATAGCAGTAACAAATAAAGTACAAATGTACTGTAAAATTTACGGTACTAAAATCTCTATCATGTGCTGAATTTTTTTAAAACCAGTTGTATCATATCTCTCATCAAATAAAGTTTAGTATATTAGATTTTATGGAGAACACTTTGTATATCGTCAAATTTGAAGGGACGGGGAAGGGTGGTAGTATTGATGTTAAAGTAATACCAAACATGTCAGGAGTAATTTGTAAAAAAAAAAAAAATAAATAAAAA
Unaligned ( gi|11 ): ATTGGCTACAGTTTTTAGTTACACCCCTTACACCGGAAGTACGGGGCGCGCTTACCTTTGCAATCCTAGACGTCACATAGATACATGTAATAGTAGAATTACTTTGCGGCAGTACACATGTATTTGTCAATTTTCACAAACACATTTTGTTA
Unaligned ( gi|16 ): GGGTCCTTCAATTTATTGGTTCCTTAAATCTTACAATTACAATATCTCTCCACT
Alignments
lowQualScore : 1111 555555555555555555555 222222222 11111 111111 8888888888888888888888888888888888888888888888888 11111111111111 222 11111111111111111 111111111111111 111111
lowQualScore : 0 4444 6 77 77 5 111111111111111111111 666666666 55 00000 7777 444444 4 2222222222222222222222222222222222222222222222222 4 8 99999999999999 55 999 3 7 666 666 3 4 77 4 777 44 55 44444444444444444 55 2 2 999999999999999 0 4 1 777777 6 3 2
lowQualScore : . .... . .. .. . ..................... ......... .. ..... .... ...... . ................................................. . . .............. .. ... . . ... ... . . .. . ... .. .. ................. .. . . ............... . . . ...... . . .
lowQualScore : 7 2222 7 99 99 7 111111111111111111111 888888888 55 00000 9999 666666 0 2222222222222222222222222222222222222222222222222 0 0 99999999999999 00 777 6 3 444 444 6 0 11 0 000 66 55 11111111111111111 55 0 2 999999999999999 1 4 0 777777 7 2 5
consensus : AATCGTGTG----T-GTAT--GTAT--GTGTGT-GT------AG----GT-GG-TT-GGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTC----------------CAA---T----AT---A-----C-----C---ACTA-TTT-AGGAAG-----G-A-A----GAAG--CAA-C-T-ATA---G---ATCAAA-CTTTG-CTTGCA-AAA---ATNACC--AACT-----T---T----G--TGA--TTATAACAGAAAT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCNA-C-C--TCTC-CCTCTTTCTCTCTCCCACGTGTGTGA
Reference ( family-4805 ) : AATCGTGTG----T-GTAT--GTAT--GTGTGT-GT------AG----GT-GG-TT-GGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTC----------------CAA---T----AT---A-----C-----C---ACTA-TTT-AGGAAG-----G-A-A----GAAG--CAA-C-T-ATA---G---ATCAAA-CTTTG-CTTGCA-AAA---ATNACC--AACT-----T---T----G--TGA--TTATAACAGAAAT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCNA-C-C--TCTC-CCTCTTTCTCTCTCCCACGTGTGTGA
gi|1 : GTG----TAGTAT--GTATTTGTGTGTTGT------GG----GTTGG-TG-GGGGGGGGGGGGGGTCCTTCAATATT-----TAAA---TCAT-CTTACG-TTCCTC----------------CAA---T----AT---A-----CATTACC---ACTAATTT-AGGAAA-----G-AGA----GGAA--CAAAC-T-ATA---G---ATCAAA-CTATG-CTTGCA-AAATATGTGACC--AACT-----T---T----GT-TGA--TTATAA---AAAC----ATG---T-GTGCT-TC-GGAAGAGAGG
gi|10 : acatgcattttgtacttaactctagtcaactctcatataaacaaaggtttagttttagtagattttatatagaacctaatcgttactagagagagtccatttagatacgtcaactggtggttcagagggggtcgtgttgacacaaatctgattgtggtttattaatctgccggcaatatgatccttataccaagacatttcggagtgatgatagagttggtgaagaaataaagtaatatcaatagacacatttaaaaatagtaaagtcaacattgaaaacacacagggacaaattgtttatctcaacaaagggagggaggtgggggggaggctcgggcccggcagatgtttaaggaattgctgactacaaaggcattcttgaagagcaaacaatatacaggcaaacaatagtcaattacctaaactcgttgtaGGT--------TCCTTAAAT--T-----TTA-----CA-------A-TTCC------------------CAA---T----AT---T-----T-----CCCAACTA-TTT-AGTAAATATACG-G-A----GAAA--C---C-T-ATA---G---ATCAAATTTTTG-CTCGTACAAA---ATAGCT--AATTAAAAAT---T----GATTGA--TTATAACAGTA------A-G-------GTTGTTAAGAAGAGAGG
gi|12 : cttcaagtcattGG--------TCCTTCAAT--T-------------CAT-T----GGTTCCTTAATAAATTA-------CAA---TTACAAT---ATTTCTC-----C---ACTA-TTT-AGTAAA-----G-ATAC---GGAG--TAA-C-TTATA---G---ATCAAA-TTTTG-CGT----------ATGATT--GA-------T---T----A--TGAATTCATAACTGTAATACTAA-G---T-ACGTTGTC-GGAAGAAAGGa
gi|13 : G-----G-A-A----CCAG--C---C-T-ATA---G---ATCGAA-CTTTG-CATGTA-AAT---GTAACC--ATCTA----TGTAT----G--TAA--TGGTGAC-GAAAA----A-G---T-GCGTATTC-GAAAAATGAGGACAG-T-C--TCCC-C
gi|14 : gGGGG----------CTTCAAT--T-----TAAA---TCAT-C----G-TTCCTTGAATTTTA--------CAA---C----ATTTCA-----C-----C---ACTA-TTTGAGGAAG-----A-A-AAGTGGAAA--C---C-T-ATA---G---ATCAAA-CTTAG-CTTGTA-AAA---ATAACC--AACT-----T---T----G--TGA--CTATAagatcccccgttgttacgtgt
gi|15 : TGT--GTGT--GTGTGT-GT-------------T-----------GG--------CCCTTCAAC--C-----TGAT---TTATAA----G-TTCCTT----------------AAACTTT----TC---A-----T-----C---ATTA-TTTCAGGAAG-----T-AGA----GGAG--CAA-CTT-ATACATGCATATCAAA-CTTT
gi|4 : AATTATGTG----T-GTAT--GTAT--GTGTGT-GTGAGTGGAG----GT-GG-TT-GGGGGGGGGGG---TCCTTCGAT--T-----TAAA---TCAC-C----G-TTCCTC----------------CA----T----A----A-----C-----C---AC-A-TTT-AGGAAG-----ACA-G----GAAG--CAAAC-TCATA---G---ATCAAA-CTTTCTCTTGCA-AAA---ATTCAC--AACT-----T---T----G--TGA--TTATAACAGAATT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCTATC-C--TCTCTCTTCTTTCTCTCT-CCACGTGTTTGA
gi|6 : ggggcgggcggcgccgggttctaatgttaaaattctgagagcaaaaagaacaacaaatataacaaatatcaaagctctaTGTG----T-GTATAAGTAT--GTGTGT-GT------AGTGTGGT-GGGTT-GGGGGG--------TCCTTCAAT--T-----TAAAATCTCAT-C----G-TTC-TC----------------CAA---T----AT---AG----C-----CG--ACTA-TTT-AGG--G-----G-A-A-----AAG--C---C-T-TTA---G---AGCAAA-CTTTG-CTTA-A-AAA---ATC-CC--AACT-----T---T----G--TGA--TTATAACAGAAAT----ACG---TAGCGTTGTC-GGAAGAGAGGGGCTA---C--TCTT-CCTATTTCTCTCTCCCACGTGTGTtga
gi|7 : aTGTC----T-GTCT--GTGT--GTGTGT-GT------GG----G--GG----GGGGGG----------CTTCAAT--T-----TAAA---TCAT-C----G-TTCCTTGAGTTTTATAACATTTCGA---T----ATTTCA-----C-----T---ACTA-TTT-AGGAAA-----G-A-A----GAGGAACAAGC-T-AAA---G---ATAAAA-CTTTG-CTTGTA-AAA---AAAACCCCAACT-----T---TCCTTG--TGA--TTATAATAG-------------------TTATC-GAAAGAAAGGGGCGA-C-AAATCTC-CCCCT--CTCTCTCatgatttctctctctctcttccgagtagttgatttacacaaaattatt
gi|8 : cAATCATGTG----T-GTAT--GTAT--GTGTGT-GT------AG----GT-GG-TTTGGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTC----------------CAA---T----AT---A-----C-----C---ACTA-TTT-AGGAGG-----G-A-A----GAAG--C---C-T-TTA---G---AGCAAA-CTTTG-CTTACA-AAA---ATTACC--AACT-----T---T----G--TGA--TTATAACAGAAAT----A-G---T-ACGTTGTC-GGAAGAGAGGGGCTA-C-C--TCTC-TCTATTTCTCTCTCCCACGTGTGTGAtttttctctttctttctttcgtgcttggtaattat
gi|9 : AATCGTGTGGGCAT-ACAT--GTAT--GTGTGT-TT------AG-------------GGGGTG--------TCCTTCATT--TCCGAGTCAA---TTAA-CCG--G-TTCCTT------------------A---T----AT---ATTTCGC-----C---ATTA-TTT-AAGAAA-----G-A-AGT--GGAG--CAATC-T-ATA---G---ATCAAA-CTTTC-CT---------------CT----CC-----T---C----G--TAA---TAT--CAGATAT----A-GTACT-ACGTTGTT-GGAAGAAA--AGCAA-CAC--TCTC-TCTC
blockSeqs : GGCA . AA . . GAGTGGAGGTGGTT GGGGGT . CCGAG AATC CCG G TGAGTTTTATAACATTTCGATATTTCACT . G TATACGGA AA AAA T T CAT CAT T T GT C . AG CC AAAAATTGAT AT A T ATACTAAGTA A T CAAA T T C
blockSeqs : . . . . . AGTGTGGTGGGTT T . . A AA . TAATAAATTACAATTACAATATTTCTCC . C AAAAGTG . AAG . C . . . . GT . . GA . ATGTATG . T T ATAGTACTA . T TCC . T C
blockSeqs : . . . . . AGGTGGTTT T . . T T . TGAATTTTACAACATTTCACC . . GATAC . AAT . . . . . . GT . . AA . TTCCTTG . A A ATACGTAG . G CAC . . C
blockSeqs : . . . . . GGGGG C . . A C . TAAACTTTTCATC . . GAAGT . AA . . . . . . GC . . AA . TTA . A A AAAGTG . T CC .
blockSeqs : . . . . . AG T . . A C . TATATATTTCGCC . . TAGA . AA . . . . . . GT . . TC . TTG . A A TTAGTG . A C .
blockSeqs : . . . T T . . A C . CAATATTTCCCA . . ACAG . . . . . . . . AC . . AA . TTG . A A ATAGTA .
blockSeqs : T . . A C . CCAATATAGCCG . . GAA . . . . . . . . A . . TA . TTG . A A AG .
blockSeqs : . . . . C . CCAATATACC . . GAA . . . . . . . . . . . C . TTG . . . . .
blockSeqs : . . . . . . CCATAACC . . GAA . . . . . . . . . . . . . TCG .
blockSeqs : GAA . . . . . . .
blockSeqCons : ** AGGTGGTT************* T******** ** C***** CAATTTTACAATATTTCACC***************************** GAA*********** AA* *** TTG************** ATAGTG********* CC****
originalCons : AATCGTGTG----T-GTAT--GTAT--GTGTGT-GT------AG----GT-GG-TT-GGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTC----------------CAA---T----AT---A-----C-----C---ACTA-TTT-AGGAAG-----G-A-A----GAAG--CAA-C-T-ATA---G---ATCAAA-CTTTG-CTTGCA-AAA---ATNACC--AACT-----T---T----G--TGA--TTATAACAGAAAT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCNA-C-C--TCTC-CCTCTTTCTCTCTCCCACGTGTGTGA
finalCons : AATCGTGTG----T-GTAT--GTAT--GTGTGT-GTAGGTGGTT-------------GGGGGGT--------CCTTCAAT--T-----TAAA---TCATC-----G-TTCCTCAATTTTACAATATTTCACC-----------------------------ACTA-TTT-AGGAAGGAA-----------GAAG--CAA-C-T-ATA---G---ATCAAA-CTTTG-CTTGCA-AAA---ATNACC--AACTTTG--------------TGA--TTATAACAGAAATAGTG---------CGTTGTC-GGAAGAGAGGGGCNACC----TCTC-CCTCTTTCTCTCTCCCACGTGTGTGA
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|2 ): TTTTTGCAGTTACTGCCCCTTACATCGTGTAATGTGTACCATAAAGGCTGGCGTGCTAATCGATGGGGTCCTAAGCATCAGATAAAATAAGTAACAAATAGAGTATTGTAAGCTTTACGGTACTAAAACATTTATTATAATTTGAATTTTCACAGATTTGTATATAACTCTCATAACAATAACAAGGTTTGTTTAGTAGATTTATATAGAAAAATTTCTAGATGAGCACATTTCGTCAATTTGAAGTGATAGGGAAAGGGGGGGGGGGGGGGTGTGACTAAATTTGATGTTACATCTATAATTCTGCCAATTATATTAATACCAAGAATTTCAGGAGAAATTTGAAAAAAAAAAAATAATATAGACATTTAAAAATAAAAAATCATTGAAAACAAACAGGACACTTGTATTCAATAAAGGAAGGAGAGAGGG
Unaligned ( gi|3 ): TTTGCAGTTACTGCCCTTACATCGGAAGTAGGGGGCGTGCTAATCGATGGGGTCCAAAGCATTAGATAAAATAGTAACAAATAGAGTATTGTAAAGCTTATGGTACTAACACATGTATTATGTTCGGAATTTTAACAGATTATATTATAACTATTATCATAACATGGTTTAGTTTAGTAGATTTTATGGAGAAAAAACAATCAATAAATGCACATTTCGTAATTTGAAGTGATAGGAAAGGGGGGAGGGGCAAATTGATGTTTATAATTCTGCCAATATGAATTATACCAAGAATTTCAGGAGTAATTTGAAAAAAAAAAGATATTAATAGACATTTAAAAATAATATCACATTGAAATATATCATGTAATTAACAGAAACATCGTTATTCAACAAAGGACTTAGGAGGGA
Unaligned ( gi|5 ): CCAGATAAAATAGCAGTAACAAATAAAGTACAAATGTACTGTAAAATTTACGGTACTAAAATCTCTATCATGTGCTGAATTTTTTTAAAACCAGTTGTATCATATCTCTCATCAAATAAAGTTTAGTATATTAGATTTTATGGAGAACACTTTGTATATCGTCAAATTTGAAGGGACGGGGAAGGGTGGTAGTATTGATGTTAAAGTAATACCAAACATGTCAGGAGTAATTTGTAAAAAAAAAAAAAATAAATAAAAA
Unaligned ( gi|11 ): ATTGGCTACAGTTTTTAGTTACACCCCTTACACCGGAAGTACGGGGCGCGCTTACCTTTGCAATCCTAGACGTCACATAGATACATGTAATAGTAGAATTACTTTGCGGCAGTACACATGTATTTGTCAATTTTCACAAACACATTTTGTTA
Unaligned ( gi|16 ): GGGTCCTTCAATTTATTGGTTCCTTAAATCTTACAATTACAATATCTCTCCACT
Alignments
lowQualScore : 1111 44444444444444444444 222222222 111111 777777777777777777777777777777777777777777 11111111111111 222 1111 22222 111111111111111 2222
lowQualScore : 0 4444 6 77 77 5 77777777777777777777 666666666 55 99999 1 666 333333 7 888888888888888888888888888888888888888888 0 3 4 8 99999999999999 55 999 7 3 666 666 3 4 77 4 777 0000 22222 777 99 55 2 999999999999999 0 4 1 3333 6 6
lowQualScore : . .... . .. .. . .................... ......... .. ..... . ... ...... . .......................................... . . . . .............. .. ... . . ... ... . . .. . ... .... ..... ... .. .. . ............... . . . .... . .
lowQualScore : 7 2222 7 99 99 7 66666666666666666666 888888888 00 11111 2 444 888888 3 999999999999999999999999999999999999999999 6 6 0 0 99999999999999 00 777 3 6 444 444 6 0 11 0 000 1111 55555 000 55 55 0 999999999999999 1 4 0 5555 7 7
consensus : AATCGTGTG----T-GTAT--GTAT--GTGTGT-GT------AG-GT----GGTT-GGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTT-AA---T----T----TTA--------CAAT-------ATTTCACC-ACTA-TTT-AGGAAG-----G-A-A----GAAG--CAA-C-T-ATA---G---ATCAAA-CTTTG-CTTGCA-AAA---ATNA--CCAACT-----T---TG--TGA--TTATAACAGAAAT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCNA-C--CTCTC-CCTCTTTCTCTCTCCCACGTGTGTGA
Reference ( family-4805 ) : AATCGTGTG----T-GTAT--GTAT--GTGTGT-GT------AG-GT----GGTT-GGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTC-AA---T----T----TTA--------CAAT-------ATTTCACC-ACTA-TTT-AGGAAG-----G-A-A----GAAG--CAA-C-T-ATA---G---ATCAAA-CTTTG-CTTGCA-AAA---ATNA--CCAACT-----T---TG--TGA--TTATAACAGAAAT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCNA-C--CTCTC-CCTCTTTCTCTCTCCCACGTGTGTGA
gi|1 : GTG----TAGTAT--GTATTTGTGTGTTGT------GG-GTT---GGTG-GGGGGGGGGGGGGGTCCTTCAATATT-----TAAA---TCAT-CTTACG-TTCCTC-CA---A----T----ATA--------CA------------TTACC-ACTAATTT-AGGAAA-----G-AGA----GGAA--CAAAC-T-ATA---G---ATCAAA-CTATG-CTTGCA-AAATATGTGA--CCAACT-----T---TGT-TGA--TTATAA---AAAC----ATG---T-GTGCT-TC-GGAAGAGAGG
gi|10 : acatgcattttgtacttaactctagtcaactctcatataaacaaaggtttagttttagtagattttatatagaacctaatcgttactagagagagtccatttagatacgtcaactggtggttcagagggggtcgtgttgacacaaatctgattgtggtttattaatctgccggcaatatgatccttataccaagacatttcggagtgatgatagagttggtgaagaaataaagtaatatcaatagacacatttaaaaatagtaaagtcaacattgaaaacacacagggacaaattgtttatctcaacaaagggagggaggtgggggggaggctcgggcccggcagatgtttaaggaattgctgactacaaaggcattcttgaagagcaaacaatatacaggcaaacaatagtcaattacctaaactcgttgtaT--T-----CAAG---TCAT-T----GGTTCCTT-AAA--T----T----TTA--------CAATTCCCAATATTTCCCA-ACTA-TTT-AGTAAATATACG-G-A----GAAA--C---C-T-ATA---G---ATCAAATTTTTG-CTCGTACAAA---ATAG--CTAATTAAAAAT---TGATTGA--TTATAACAGTA------A-G-------GTTGTTAAGAAGAGAGG
gi|12 : cGG--------TCCTTCAAT--T-------------CAT-T----GGTTCCTT-AA---TAAATTACAATTA--------CAAT-------ATTTCTCC-ACTA-TTT-AGTAAA-----G-ATAC---GGAG--TAA-CTT-ATA---G---ATCAAA-TTTTG-CGT----------ATGA--TTGA-------T---TA--TGAATTCATAACTGTAATACTAA-G---T-ACGTTGTC-GGAAGAAAGGa
gi|13 : G-----G-A-A----CCAG--C---C-T-ATA---G---ATCGAA-CTTTG-CATGTA-AAT---GTAA--CCATCTA----TGTATG--TAA--TGGTGAC-GAAAA----A-G---T-GCGTATTC-GAAAAATGAGGACAG-T--CTCCC-C
gi|14 : gGGGG----------CTTCAAT--T-----TAAA---TCAT-C----G-TTCCTTGAA---T----T----TTA--------CAAC-------ATTTCACC-ACTA-TTTGAGGAAG-----A-A-AAGTGGAAA--C---C-T-ATA---G---ATCAAA-CTTAG-CTTGTA-AAA---ATAA--CCAACT-----T---TG--TGA--CTATAagatcccccgttgttacgtgt
gi|15 : TGT--GTGT--GTGTGT-GT----------T-------------GG--------CCCTTCAAC--C-----TGAT---TTATAA----G-TTCCTT-AA---------------A--------C--T--------TTTCATC-ATTA-TTTCAGGAAG-----T-AGA----GGAG--CAA-CTT-ATACATGCATATCAAA-CTTT
gi|16 : GGG--------TCCTTCAAT--T-----T--A---T--T-G----G-TTCCTT-AAATCT----TACAATTA--------CAAT-------ATCTCTCC-ACT
gi|4 : AATTATGTG----T-GTAT--GTAT--GTGTGT-GTGAGTGGAG-GT----GGTT-GGGGGGGGGGG---TCCTTCGAT--T-----TAAA---TCAC-C----G-TTCCTC---------------------------CA-T-------A----ACC-AC-A-TTT-AGGAAG-----ACA-G----GAAG--CAAAC-TCATA---G---ATCAAA-CTTTCTCTTGCA-AAA---ATTC--ACAACT-----T---TG--TGA--TTATAACAGAATT----A-G---T-GCGTTGTC-GGAAGAGAGGGGCTATC--CTCTCTCTTCTTTCTCTCT-CCACGTGTTTGA
gi|6 : ggggcgggcggcgccgggttctaatgttaaaattctgagagcaaaaagaacaacaaatataacaaatatcaaagctctaTGTG----T-GTATAAGTAT--GTGTGT-GT------AGTGTGGTGGGTT-GGGGGG--------TCCTTCAAT--T-----TAAAATCTCAT-C----G-TTCTCC-AA---T----------------------AT-------A----GCCGACTA-TTT-AGG--G-----G-A-A-----AAG--C---C-T-TTA---G---AGCAAA-CTTTG-CTTA-A-AAA---ATC---CCAACT-----T---TG--TGA--TTATAACAGAAAT----ACG---TAGCGTTGTC-GGAAGAGAGGGGCTA----CTCTT-CCTATTTCTCTCTCCCACGTGTGTtga
gi|7 : aTGTC----T-GTCT--GTGT--GTGTGT-GT------GG-G-----GG---GGGGGG----------CTTCAAT--T-----TAAA---TCAT-C----G-TTCCTTGAG---T----T----TTATAACATTTCGAT-------ATTTCACT-ACTA-TTT-AGGAAA-----G-A-A----GAGGAACAAGC-T-AAA---G---ATAAAA-CTTTG-CTTGTA-AAA---AAAACCCCAACTTTCC-T---TG--TGA--TTATAATA-------------------GTTATC-GAAAGAAAGGGGCGA-CAAATCTC-CCCCTCTCTCTCTatgatttctctctctctcttccgagtagttgatttacacaaaattatt
gi|8 : cAATCATGTG----T-GTAT--GTAT--GTGTGT-GT------AG-GT----GGTTTGGGGGG--------TCCTTCAAT--T-----TAAA---TCAT-C----G-TTCCTC---------------------------CAAT-------AT---ACC-ACTA-TTT-AGGAGG-----G-A-A----GAAG--C---C-T-TTA---G---AGCAAA-CTTTG-CTTACA-AAA---ATTA--CCAACT-----T---TG--TGA--TTATAACAGAAAT----A-G---T-ACGTTGTC-GGAAGAGAGGGGCTA-C--CTCTC-TCTATTTCTCTCTCCCACGTGTGTGAttttctctttctttctttcgtgcttggtaattat
gi|9 : AATCGTGTGGGCAT-ACAT--GTAT--GTGTGT-TT------AG-G-----------GGGTG--------TCCTTCATT--TCCGAGTCAA---TTAA-CCG--G-TTCCTT--A---T----------------------AT-------ATTTCGCC-ATTA-TTT-AAGAAA-----G-A-AGT--GGAG--CAATC-T-ATA---G---ATCAAA-CTTTC-CT-----------------CT--CC-----T---CG--TAA---TAT--CAGATAT----A-GTACT-ACGTTGTT-GGAAGAAA--AGCAA-CA-CTCTC-TCTC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|2 ): TTTTTGCAGTTACTGCCCCTTACATCGTGTAATGTGTACCATAAAGGCTGGCGTGCTAATCGATGGGGTCCTAAGCATCAGATAAAATAAGTAACAAATAGAGTATTGTAAGCTTTACGGTACTAAAACATTTATTATAATTTGAATTTTCACAGATTTGTATATAACTCTCATAACAATAACAAGGTTTGTTTAGTAGATTTATATAGAAAAATTTCTAGATGAGCACATTTCGTCAATTTGAAGTGATAGGGAAAGGGGGGGGGGGGGGGTGTGACTAAATTTGATGTTACATCTATAATTCTGCCAATTATATTAATACCAAGAATTTCAGGAGAAATTTGAAAAAAAAAAAATAATATAGACATTTAAAAATAAAAAATCATTGAAAACAAACAGGACACTTGTATTCAATAAAGGAAGGAGAGAGGG
Unaligned ( gi|3 ): TTTGCAGTTACTGCCCTTACATCGGAAGTAGGGGGCGTGCTAATCGATGGGGTCCAAAGCATTAGATAAAATAGTAACAAATAGAGTATTGTAAAGCTTATGGTACTAACACATGTATTATGTTCGGAATTTTAACAGATTATATTATAACTATTATCATAACATGGTTTAGTTTAGTAGATTTTATGGAGAAAAAACAATCAATAAATGCACATTTCGTAATTTGAAGTGATAGGAAAGGGGGGAGGGGCAAATTGATGTTTATAATTCTGCCAATATGAATTATACCAAGAATTTCAGGAGTAATTTGAAAAAAAAAAGATATTAATAGACATTTAAAAATAATATCACATTGAAATATATCATGTAATTAACAGAAACATCGTTATTCAACAAAGGACTTAGGAGGGA
Unaligned ( gi|5 ): CCAGATAAAATAGCAGTAACAAATAAAGTACAAATGTACTGTAAAATTTACGGTACTAAAATCTCTATCATGTGCTGAATTTTTTTAAAACCAGTTGTATCATATCTCTCATCAAATAAAGTTTAGTATATTAGATTTTATGGAGAACACTTTGTATATCGTCAAATTTGAAGGGACGGGGAAGGGTGGTAGTATTGATGTTAAAGTAATACCAAACATGTCAGGAGTAATTTGTAAAAAAAAAAAAAATAAATAAAAA
Unaligned ( gi|11 ): ATTGGCTACAGTTTTTAGTTACACCCCTTACACCGGAAGTACGGGGCGCGCTTACCTTTGCAATCCTAGACGTCACATAGATACATGTAATAGTAGAATTACTTTGCGGCAGTACACATGTATTTGTCAATTTTCACAAACACATTTTGTTA