lowQualScore : 11 222222222 3333333333333 22222 3333333 111 111 22222 111 111 11111 111 333333 11 444444444444444 1 22222 111 22222 1111 1 111 44444444444444 1 11111 11 222 11111 3333333333333333 33333333333333333333 11 11111111 11111 5555555 1 22222 444444444444 33333 222 11 777777777777777777777777777777777777777777777777777 111 1 11 11 1 11 1 1111111 11111111 1 11111 1 111111 2222222222 66666666666666666666666666666666666666666666666 11 22222222 111 3333333
lowQualScore : 6 77 0 444444444 5555555555555 99 00000 1 5 5 3333333 666 333 6 4 5 33333 222 66 555 99 2 0 77 2 99 55555 000 5 5 1 77 0 4 5 5 66 5 1 4 99 4 55 66 9999 222222 1 0 88 4 66 4 2 1 4 6666 66 555555555555555 4 9999 9 66 66 5 5 1 1 5 5 4 1 66 66 4 2 1 4 66 0 2 55 4 4 44 3 3 3 666 2 2 3 55 666 0 3 6 4 4 4 33333 0 0 5 8888 88 00 000 9 33 1 7 4 3 55555 2 1 0 3 5 0 66 3333 4 8 444 6 4 44 777 2 5 5 2 2 66 0 5 222 5 5 0 5 66666666666666 7 3 7 5 5 55555 888 88 66 8 222 66 11111 5 4444444444444444 5 00000000000000000000 66 5 0 888 66666666 888 22222 4 777 4 4444444 3 66666 4 5 3 55 4 777777777777 5 1 33333 333 5 5 11 5 999999999999999999999999999999999999999999999999999 000 999 1 1 7 1 77 5 77 00 5 8 3 5 4 44 5 1 5 8888888 11111111 66 3 888 66 22222 2 888 55 66 4 1 1 0 3 66 777777 66 0 0000000000 1 33333333333333333333333333333333333333333333333 666 0 55 5 3 99999999 7 222 2 0000000 88
lowQualScore : . .. . ......... ............. .. ..... . . . ....... ... ... . . . ..... ... .. ... .. . . .. . .. ..... ... . . . .. . . . . .. . . . .. . .. .. .... ...... . . .. . .. . . . . .... .. ............... . .... . .. .. . . . . . . . . .. .. . . . . .. . . .. . . .. . . . ... . . . .. ... . . . . . . ..... . . . .... .. .. ... . .. . . . . ..... . . . . . . .. .... . . ... . . .. ... . . . . . .. . . ... . . . . .............. . . . . . ..... ... .. .. . ... .. ..... . ................ . .................... .. . . ... ........ ... ..... . ... . ....... . ..... . . . .. . ............ . . ..... ... . . .. . ................................................... ... ... . . . . .. . .. .. . . . . . .. . . . ....... ........ .. . ... .. ..... . ... .. .. . . . . . .. ...... .. . .......... . ............................................... ... . .. . . ........ . ... . ....... ..
lowQualScore : 0 00 7 333333333 5555555555555 22 22222 7 7 7 0000000 777 222 7 7 2 22222 555 88 000 22 5 3 33 8 22 00000 000 7 7 9 77 7 3 9 7 44 0 0 4 33 4 99 11 4444 111111 7 7 33 4 11 4 7 9 4 9999 11 222222222222222 4 4444 4 11 11 4 0 4 4 0 0 2 9 88 11 4 0 0 4 11 9 6 55 0 5 22 6 6 6 444 4 8 6 00 444 2 8 2 4 4 4 44444 7 5 0 5555 44 66 222 6 55 1 9 2 8 55555 5 5 3 1 0 1 11 6666 4 9 999 7 4 66 888 2 0 0 5 5 99 7 7 666 7 7 1 7 44444444444444 6 5 2 0 9 22222 888 88 99 8 444 99 00000 0 4444444444444444 0 00000000000000000000 00 0 8 888 11111111 000 00000 4 888 4 4444444 3 77777 0 0 4 55 0 999999999999 0 9 99999 888 0 0 99 7 000000000000000000000000000000000000000000000000000 000 666 6 7 3 6 11 7 99 00 7 1 7 7 0 33 7 1 7 6666666 99999999 99 9 888 99 55555 6 888 44 99 8 8 1 4 0 66 666666 33 1 9999999999 1 00000000000000000000000000000000000000000000000 888 8 22 0 2 00000000 0 888 5 0000000 77
consensus : ATGGCTT-NAAAT--NAT-CCNTGTTT-CTTG--TAG-AATTTC--CTN--TAAACTTCTG-A-TATTTA----T-ATTGC-AGGACTCCAACACGCTN--TA-CGACAGCATACTGGATTACCTNCA--ATACGACAA--GCACCTGAAGNCGCACCTAGNC-AGAG--AACGNTGCTTCGTTCTAGGTTTTA-AGTCGGA--TGGTTCATC-NTTCC-AGGACGCGCTTTCTG-AACTAGAG-AAGTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGAC-TGGGCATTGT-CTGAAGTC-GT-ACTCAG-AGAA--CTC----AGAGG----C-AAAGAAAA--A-GA--ATGATGTCGGTTA-CA-G--AA--TT----TNG-AGAGAATTGT-T----TTGGTGAAAAC-GAAGAGAA--ATACNCA-CAAATGAAGGAT-AT-CCTAAAGTTCTACCATGATATAGGCGTNATA--CTA-CACTTTGACGAGAG-TT--CTCTTGCCGAA--ACTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATG---TCAGGGATNTTGTTGATAAC-AACCGC-GATTGG----CTTTCCTTTTA-CAAAA-AC-GGTCATAT-CCTAGACAG--NCTTTTGACCACNATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAATCAAAA--CAAAGCAAAC---TTGTT-GCAA-TA-T-ATGNAGC-G-GC---TTGGTCTCA-T-TGCAGTTGGTANAGACGCACA--TTACATCCCGT-GTATGAACAAGN-TG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCC-AACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTCTGCCATA-CTTC-TTT---TATTT---CCGT-CTTAT--TGTTGCCTTGT--TTGAC----GAAAAC-CA-------ACG--GGCGA-ATGGG------TCG-T----T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--T----NC-A---AA-AACC-TC-GCTTG-TTTT--G-TCTNTAA-GCG-ACATGCTGTAG-CGCT-----GGC-TGTGNATAGATATTCAATTCAGCT-TTCAGGT--T-TTT-C--AGCC-CAG-C--A--A-GNNTCAAT--CGCA-A-AAGGATGTCACA-CTGGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCACAAGTAACT-TTCACAAGAA--AGT-NATGT-ACACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTT-CGNGAACACG-ATGAC-------TGTTTTA---TC---GAAGAGAA--AGAAA---TTTATG--GGAA-----AGGAAAAATCACTTGTC---CAG-AAC--ATGGAATGNTCAATCATCACACCCTGAGTGAATCCGCTCT-CTTA-GGCTATTGGAA-ACAGGTA-----TCT--TCATC-N-ATAGG-------CGT--TTCATNATTT---NT---TT--TNA-NAAGTACATTATTTCNAATGACAATNTAT--------ACGATNC-ATGCA------TATCGTTTTAGTTT
Reference ( gi|6 ) : ATAGCTT-GAGAT--AAT-CTGTGTTT-C--G--TAG-AATTTC--CTC--TCAACTTCTG-A-TATTTA----C-ATTAC-AGGACTCCAACACGTTA--TA-CAACAGCATACTGGATTATCTCCA--ATTCGACAG--ACACCTGAAAACGCACCTAGAT-AGAA--AACGCTGCTTTGTTCTAGGTTTTA-GGTCAGA--TGGTTCCTT-TTTTC-AGGACACGCTTTCTG-AACTAGAG-AAGTGCATAGTTTCAGTTGCTAAAGAAGATAGGTGGAAGGAAACCA-TTCCTA-CAGAC-TGGGCATTGT-CTGAAATT-GT-ACTCAG-AGAA--CTC----AAAGG---TC-AAGGAGAA--A-GA--ATGGTGTCGGTTA-CA-G--AA--TT----TAG-AGAGAGTTGT-T----TTGGGGAAAAC-GAAGAGAA--ATACGCA-CAAATGAAGGAT-AT-CCTAAAGTTCTACCACGATATAGGCGTGCTA--CTA-CACTTTGATGAAAG-TT--CTCTAGCTGAA--ACTGTCA-TCATTAACATCCAA-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATG---TCAGAGATATCGTTGATAAC-AACCGC-GACTGG----GTTTCCTTTTA-CAAAA-GT-GGTCACAT-CCTAGACAG--GCTTTTGACGACTATTTGGAGTATTCGGAACTTTGAAATCAGTCGCTGGGAAAGAAATCAAAA--CAAAGCAAAT---TTGTT-GCAA-TA-T-ATGCAGC-G-GC---TTGGTCTTA-T-TGCAGTTGGTACATACGCACA--TTACATTCCGT-GTATGAACAAGA-TG-ACCTTT-GGTATCAAGG-AAGAGAAC-T-TTTGTTC-AACTCCATCCAAAATAAAACATCGGTATTGGTCTTTCGATTTCAATTTCTGCCATA-CTTCTTTT---TATTT---CCGA-CTTAT--TGGTGCTTTGT--TTGAC----AAAAAC-CA-------ATG--GGCGA-ATGGA------TCG-T----T-T--GGAG-GACA-ATGGAC---TTTG--------TCTC--T----AC-A---AA-A--T-TT-GCTTG-TTT---G-TCTATAA-GCG-ACACGCTGT-G-CGCG-----GGC-TGTGAATAGATATTCAATTCAGA--T-CAGG---T-TTT-C--AGCC-CAG-C--A--G-GTTTTAAT-ATGCA-A-AAGGATGTGACAGCTAGAA-ATCAGCGTGACA---ATATTGAGA-GATTACTGAATGGTCTAACAAAAAACT-TTCACAAGAA--AGT-GATGT-ACAATGTCGGATATCAA-TGCTCAAG-GCAGGAAGTGTTT-CGCGAACACG-ATGAC-------TGTTTTA---TT---GAAGAGAA--AGACA---TTTATG--GGAA-----AGGAAAAATTACTTGTC---CAA-AAC--ATGGAATGATTAATCATCATATCCTGAGTGAATCCGCTCT-TTTG-GTCTATTGGAA-ACAGGTA-----TCT--TTATC-A-ATAGG-------CGT--TCCATCATTT---CT---TT--TCA-CAAGTACATTATTTCTAATGACAATGTAT--------ACAATGC-ATGCA------TATAATTTTAGTTT
gi|8 : ATGGCTTTGAGATGGAATACTTTGTTTGC--GCTTAGGAATTTCACCTC--TCAACTTCTG-AGTATTTAATTTT-ACTACCAGGACTCCAACACGTTAGTTAACAACAGCATACTGGATTATCTCCA--ATTCGACAGGCACACCTGAAAACGCACCTAGATAAGAAAGAACGCTGCTTTGTTCTAGGTTTTAGGGTCAGGATTGGTTCCTT-TTCTCGAGGACACGCTTTCTGAAACTAGAGAAAGTGCA-AGTTTCAGTTGCTAAAGAAGATA-GTGGAAGGAAACCAGTTCCTATCAGAC-TGGGCATTGTGCTGAAATT-GTCACTCAGCAGAAACTTC----AAAGG---TCTAAGGAGAA--AGGA--ATGTGGTC-GTTA-CAGG--AA--TT----TAG-AGAG---TGTGT----GTGGGGCAAACGGAAGAGAAATATACGCACCAAATGAAGGATAATACCTAAAGTTCTACCACGATATAGGCGTGCTA--CTACCACTTTGATGAAAGTTT--CTCTAGCTGAA--ACTGTCATTCATTAACATCCAACTGGTGTTGGT-TGATTCC-TTAAG---AACATAATAACTGCATCCAAAAACCATG---TCA-AGATATCGTTGATAAC-AACCGCAGAC-GG----GTTCCTTTTGA-CAAAATATCGGTCACAT--CTAGACAGGCGCTTTTGACCACTATTTGGGGTATTC-GAACTTTGAAATCAG-CGCTGGGAAAGACATC-AAA--CAAAGCAAA-----TGTT-GCAAGTA-TAATGCAGC-GAGC---TTGGTCGTATT-TGCAGTTGGTACATACGCACACCTTACATTCCGTAGTATGAACAAGACTGCACCTTGAGGT-TCAAGGAAAGAGAAC-T-TT--TCC-AA-TCCA
gi|1 : cGCTT-TAAAT--GAT-CCATGTTT-CTTG--TAG-A-TTTC--CTC--TAAATTCCTT-A-TATTTT----T-ATTGC-AGGACTCCAACACGTTA--TA-CGAAAGCATACTGGATTATCTCCA--TTTCGACAA--GCACCTGAAGACGCACCTAGAC-AGAA--AACGCTGCTTTGCTCTGGGTTTTA-GGTCGAA--TGGTTCATT-ATTCG-AGGACATGCTTTCAG-AATTAGAG-AAGTGCATAGCTTCAATTGCTGAAGACGAGAGGTGGAAGGATACCA-TTCCTA-CAGAC-TGGGCATTGT-CTGAAGTC-GT-ACTCGG-GGAA--CTC----AGAGG------AAAGAAAATGA-GA--ATGATATCAGTTT-CA-G--AA--CT----TTC-AAAGAATTGT-T----TTGGTGACAAC-AAAGAGAA--ATACTCA-CAAATGAAGGAT-AT-CCTAAAGTTCTTCCATGATATAGGTGATCTA--CTA-TACTTTGACGAGAA-TT--CTCTTGATGAA--ACTGTCA-TCATTGACATCCCG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCA--AAACCATA---TCATGGATTTTCTTGTTAAC-AACCCC-GATTGG----CTTTCCTTTTA-CAATA-GT-GGCCATAT-CCTAGACAG--GCTTTTGACCATCATTTGGAATATACAGAACTTTGACTTTGGTTACTGGGAAAGAAATCAAAA--CAAAGCAAAC---TTGTT-ACAA-TA-T-ATGGAAC-G-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACACACT--TTACATCCCGT-GTATGAACAAAA-GG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTC-TCC-AA-TCTATTCAAAGAAAAACATCGGTATTGGTCTTCCGATTTCATTTTCTGCCATA-CTTC-TTT---TATTT---TCGT-CTTAT--TGTTGC-TTGT--TTGAC----GAAAAC-CA-------ATG--GTC-A-ATGGA------TCG-T----TAT--GAAA-GACA-ATGGAC---TTTG--------CCTC--T----ACAA---AA-A--TGTC-GCTTGTTTT---G-TCTTCAA-GGA-ACATTCCGTAG-CGTT-----AGC-GGTGGATAGATATTCAATTCA-ACTT-CAGGT--T-TTT-C--AGCC-CAGCC--A--A-GTATCAAT--CGC--G-AAGGATGTCACA-CTAGAA-ATT--CGTGACA---ACATTGAAC-GATTACTGAATGGTCTCACAAGTAATT-TTCATAAGAA--AGT-TATAT-ACACTGTAGGATATCAA-TGTTCAAT-GCAAGAAGTGTTT-CGAGAACACG-ATGAC-------TGTTTTA---TT---GAAGAGAA--AGACA---TTTATG--GGAA-----GGGAATAATGACTTGTC---CAG-AAC--ATGGAATGATTAACCATCATCCCTTGAGTGAATCTGCTCT-CTTA-GGTTATTGGAA-ACAGGTA-----ACT--TCATC-T-ATACG-------TGT--TTTATAATTTATCCTTTATT--TCA-AGAGTAAATTATGCACAATGGCCATATAA--------ACATTTC-ATTCA------CATTGTTTCAGTTT
gi|19 : ttGTTT-AAAAT--TAT-ACATGTTT-CTTG--TAC-A-TTTC--CTA--TAAACGACTG-A-TATTTA----T-ATTGC-AGGACTCCAACATGTTataatgataatatttcttttattcaggatgtcctagtcgaagtaagaggtaagtctcttcatttacgatattgattaactgagcacagtgattacaaataattcat
gi|3 : atAT-TTTTGATT-T--G--TA---ATTTT--CTAAATAAAATTTCG-A-TGCTT--------TT-T-AGGATCGTGATACGCTG--TA-CTACAACATACTGGATTGCATTCA--GGACGACAA--ACATCTGAAGCAACACTTAGCA-AGAG--AGCGATGCTTTGTTCTTGGTTTTA-AATCTGA--TGATTCATC-ATTCG-AGGACACGCTTTTTG-AATTAGAG-AAGTGCATAGTTTCGATTGCTATGCAAGACAGATGGAAGGAATCCA-TTCCTA-CGGAC-TGGGCACTGA-CTGAGGTC-GT-ACTCAG-AAAA--CTC----AGAGA---AC-AAAAAAAG--A-GA--ATGATATCAGTTA-CA-G--AA--TTA---TCG-AG-GAAATGT-T----TTGATAAAAAC-AAAGAAAA--ATATACA-CAGATCAACGAC-AT-TCTAAAATTTTACCATGATATAGGC--GCTATCCTA-CACTTTGACGAGAG-TT--CTCTTGCCGAC--ATTGTCA-TCGTTGACATCCAG-TGGT-TT-GT-TGATTGCTTCAAG---AACATAATAACCG-ATCC--AAACCATG---CCAGGGAGCTTGTCCACAAC-AAAGGC-GAATGG----TTAGCGTTTAA-CGAAA-AC-GGTCATAT-ACAAGACAG--TCTCTTGACCAATATTTGGAGCAGTCGACAGTTTGAAATTAATT-CCG---ATGACA--AAAA--C------AAT---CTGTT-AAAA-TA-C-ATGGAAC-G-TC---TTGGTCTTA-TCTATA-TTGGCAGAGAGGCACA--TTTTATCCCTT-GCATGAACAAGC-GG-ACCTTC-ACGACCGAAC-AAAAGAACAA-ATTG--CAAACTT--TCCCAAGTCAAACGTCTGTCCTGGTCTTCCGGTTTCCATTTCTGCCATA-TTTC-ATT---TATTT---CCGT-CTGAT--TGTTGC-TTGT--CTGAC----AAAGAC-CA-------ATG--GA-GA-ATGGA--------GAT----T-TCCAAAA-GACA-AAGAA-----TTG--------TCTTTAT----AC-A---AA-AACC-TA-GCGTGCTTT---C-TCTGTAA-GAG-CCACACTGTAG-TCCT-----TGC-TGTCAATAAATATTCAGTTCAGCT-T-CAGGT--T-TTT-C--ACCC-CAG-C--A--ATGTTTCAATCCCACA-A-A---CTGTTACA-TTGGAA-ATC--CGTGCTG---ATATTGAAA-AGTTACTGAGGGGTCTCACCAGTAACT-TTCACAAAGA--AAT-CATGT-ACACTGTAGGATATCAA-TGCTCACA-GCAGGATGTGTTT-CGTGAACATG-ATGAT-------TGTTTCG---TG---GAAGAAAA--AGATA---TTCAGG--GGAA-----AGGCAAGCAGACTTGCC---CAA-TCC--ACGAGATGGCTAATTTCCATACCCTGAATGAATCAGATCTCCTTC-ATC-ATTGGAA-TAAGGTA-----TATTGTTTTT-AGATAGA-------TGTTATCCGATACAT---CA---TT--TAA-GAA--ACATTA-CTCTTAT--CAAGTTAT--------AC
gi|2 : TTT-T--G--TA--AATTTC--ATA--CAAATTTCTG-A-TATTTA----C-ATTGT-AGGATTCTAACATGTTG--TA-CAACAGCATACTGGATTATCTAAA--AGATGATAA--GCACCTGAAGCCGCACCTAAGT-AGAA--AACGATGCTTCGTTCTGGGTTTTA-AGTCAGA--TGGTTCATT-TTTCC-AGGACGCACTTTCTG-AACTAGAG-AAGTGCATAGTTTCATTTGCTAAAGAAGAGAGGTGGAAAGAGACAA-TTCCTA-CAGAC-TGGGCAGTGT-CTGAAGTC-GT-ACTCAG-GGAA--CTC----AGAGG------AAAGAAAAAGA-GA--ATGATGTCGGTTG-CA-C--AA--TTA---TCGCAGAAA--TGT-T----TTGGTACAATC-CAGGAGAA--ATACGCA-CAAATGAAAGAT-AT-CATAAAGCTCTACCATGATATAGGCGTTATA--CTA-CACTTTGAGGAGAG-TT--CTCTTGCCGAA--ACTGTCA-TCATTGACATCAAG-TGGT-TT-GT-TGATTGCTTTAAG---AACATAATAACTG-ATCC--AAACCATG---TCAGAGATATTATTGATAAC-AACCGT-GATTGG----CTTTCCTTTTA-CAGAA-GC-GGTCATAT-CCTAGACAG--ACTTTTGACCACTATTTGGGATAGTCAGCTCTTTGAAGTctatacacattagtctaatcaattacaatttccatgtttcttttaacaggatgttctaggaaaaccaacaagtgagtaactataggaattgtatgaaataatatattatattagtttcaaaagtgtaattgcagttta
gi|4 : tgctATTCT--CTC--T-AAGTTTTGCA-TATTTT----CGATTTT-AGAATGCCAACACGCTC--TA-CTACAGTATACTGGATTACATACAGGAT--GACAA--AGAGCTGAGGTCACACTTATCC-AGGG--AACACTGCTTCGTTATAGGATTTA-AGTCGGA--TGGTACAGC-ATTCC-AAGACACGCTGTCTG-AATTAGAG-AAGTGTATTGTATCTATTGCTAGACAAGACAGATGGAAAGAATCCA-TTCCTA-TTGAT-TGGGCACTGG-CTGAAAGC-GT-ACTCAG-AGAT--CTT----AGAGG------AAAGAAAA--A-GAGAATGGCGTCGGTTG-AA-G--AC--TTATCATGG-CAA----TGT-T----TTGGTCAAATC-AAAGAAAA--ATGCTCA-CAAATCAGCGAT-AT-CCTGAAGTTTTACCATGAAATAGGCATTATC--CTA-CACTTTCCTGAGAG-TT--CGCTTGCCCAA--ACTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TAATGCCTTCAAG---AACATAATAACGG-ATCC--AAACCACG---TCAGAGAATTTGTTATCAAC-CACCGC-GAATGG-----TTGGATTTTAACAAAA-AC-GGCCATAT-TCAAGACAG--TCTTTTGACAAAGATTTGGAGTACTGGGGACTTTGAAATC----GATAGGGAGGA----------CAAAAGAGAC---TTGCT-ACAA-TA-C-ATGGAAC-G-CC---TTGGTCTCA-T-TTTTGTTGGAAAGAAGGCACA--TTACATTCCGT-GTATGAACAAAC-AG-ACATTT-GCTGTTGAAC-AACAGAAA-GATTTG--C-AA-TCATTTCCAAGTCAAACATCAGTATTGGTCTTCCGATTTCCTTTTCTGCCATA-CTTC-TTT---TATTT---CCGT-CTGAT--TGTTGC-ATGT--TTGAC----ACAAAC-TG-------GTG--GA-AA-CTGGG------TCA-TC---C-T--GGAA-GACG-ATGGAC---TTTG--------TTTG--T----TT-A---AAGA--C-TTGGCTTGCTTT---G-TCTTTAA-AAA-TCATACAGTAG-CTTT-----GTC-TGTGAACAAATATTCAATTCAGCT-T-CAGGT--T-TTT-C--ATTC-CAG-CAAA--G-G-TTCAAT--TCCACA-AAT--TGTTACA-TTGGAA-ATC--CGTGATG---ATATCGAAC-GATTACTGAAGGGTCTCACCAGTAATT-TTCACAAAAA--AAT-CATGT-ACACTGTTGGATACCAA-TGCTCAAA-ACAGGAAGTGTTC-ATTGAACACG-ATGAC-------TGCTTTG---TT---GAAAAGAA--AGAAA---TCCACG--GGAA-----AGGAAGAATCACTTGCC---CAA-GAC--ATGGAATGCGCAATCGCCACATCCTGGATGAATCAACTAT-CCTA-TTTCATTGGAA-TAGGGTA-----TTTA-TTTTC-A-Aggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattagaaatcagagcaaaacaaatttgttgcaatatatgcagcggcttggtctcatcgcagttggtacagacacgcattacatcccctgtatgaacaagttgacctttggtagcaaggaagagagctttgttcgctctatcaaaagtaaaacatcggtattggtctttcgatttcattttctgccatatttcttttatttccgtcttattgttgcctgtatgacgaaaaccaatcgtgaatggatcgttttgaacaacaatggactttgtctcttcaaaaatgtcgcttgttttgtctataagcgacatgttgtagcgttggctgtgaataaatattcaattcagattcaggtttttcagcccagccaaacgccaatcgcaaaagatgtcacactagagatccgtgacaatattgaaaaattgctgaatgatctcacaagtaactttcacaagaaagtgatgtacactgtggggtatcaatgttcaaagcaggaagtgttcagagaacatgatgactgttttatcaaagagactgaaatttataggaaaggggaaattacttgtccagaacatgggatgttcaatcatcacactctgagtgaatccgctcttttaggctattggaaacaggtatcttaatccggaagtgtttaatagttgataatttattatttcaaatgacaatgtatacatacaatgcacaccgttatagttttattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|5 : tgtttgcaaatgccttacctttatctttgCTCCTC-A-TATTT-----T-GTTTT-AGAGCTCCCACAAGCTC--TA-CGAGAACATACTGGATTACCTAAA--GCACGACCA--GCATCTCAAGAAACATTTGGCC-AGGG--AACGATGTTTCGTTGTAGGGTTTA-AGTCGGA--TGGTTCATCATTCGC-AG-ATGCACTCTCTG-GCCTTGAG-GAACGCATCGTTTCGATTGCAAACCAACCTAGATGGACGGAATCCA-TTCCAG-GGGAT-TGGGTAACTT-TTGAAGTG-GT-ACTTAG-ACAA--CTC----AAGGA---AG-ATGGAAAG--A-AA--ATTGTCCCTGTTA-AA-A--CA--TTGT--CAC-AGCTA--TGT-T----TTGGTGACAAC-AAAGAAAA--ATCCAAA-CAAATCAGCGAT-GT-CCTGAGATTTTACCATGATATAGGCGTTATA--CTT-CACTTTGACGCAGG-TT--TTCTATCCGAA--AATGTCA-TTCTTGACATCCAA-TGGT-TT-GT-TGATTCTTTTAAG---AATATTATCACCG-ATCC--AAACCATT---TTGTGGAGCTGGTTGAGAAC-AACGAT-GATTGG----CGTGCTTTTAA-CGACA-AC-GGGCACATATCT-GACGA--TCTTTTGACGAAGATTTGGACAAGTCAGGAATTTAGAATCA--------------AACCAGATGTCAAAGTAAGC---TTGTT-GCAA-TA-C-ATGGAAC-G-TC---TTGGTCTCA-T-TTACGCCGGTCGAGAGGCGCA--TTATATTCCGT-GCATGAACAAGT-TG-ACCTTT-GGTAGCAATG-AAGAGGAA-TATCTGC----GTTCCATTCAAAATAAAACATCAGTTTTGGTCTTCCGATTTCAATTTCTGCCATA-CTTCATTT---T-TTT---CCGG-CTGAT--CGTTGCCT-GT--TTGAC----GAATAC-CA-------ACAATGGAGA-ATGGG------ACA-T----TCT--GGAA-GACA-AAGGAC---TTCG--------TTTG--T----TC-A---AA-AACG-TC-GCGTG-TTT---TCTCTTTAG-ATG-TCATACAGT-AATTCT-----GGC-TGTACACAAACATTCAATTCAGC--TTCAGA---T-CTT-CC-AGCC-TAG-C--A--ATGACTCAAT----CA-AGAAGGATGTTAC-TCTGAAA-GTT--CGTGACG---ATGTTGAAA-GATTACTGAAAGAACTGACTGAAAACT-TTCACAAGAA--AAT-CGTGT-ATACTGCAGGATATCAA-TGTTCAAATACAGCAG--GTTT-CATAGATATG-ATGAC-------TGCTTGT---CT---GAGAAGAA--AAA-A---TTCGT---GGAA-----AGGAAAACTCCCATGTC---CGA-AAC--ATGGAATGCTAAATCATCACGAACTGAAGGAGTCAACTCT-TCTATATC-ATTGGAATGC-GGTATTATTTTC--TTATCAA-ACAAA-------AAA--TCCAT-ATTT---AT---TTTGTTATCAAGAACAAACTTTC--ATTACAATCCATTATTTAGAACGATGA-ATG-A------TATatacgaatttcctatgttattatctatatcaacatcattttttctcattttcgtatataggtataaagaattgtatacatcattttcagttaataatgatgataattttcttttaactaggatgtcctggccgtaccaaccggtgagtaag
gi|9 : TCCG-ACCTAGAA-AACTGTATTGTTTCTATCGCGAAAGAAGACAAATGGAAAGAATCTA-TTCCCA--AGGCATGGTCATT-T-ATGGAATTGGT-GTTCAT--GAA--TTTGAAAAAAGGGGTTA-AAAGTGAA--A-GA--AT--TTTTGACCAGCA-GGTAA--TT----T---CAAGAATTAT-TTCTATCAGCGAGCTC-GAAGAGAG--ATAtttgccgctactaatgtgaatgttctttttttaattaggatgttcgagtggaaccaacgggtgagtaaat
gi|12 : ggataaggacgagttttatgataaccttttggatttgctaccaaaagatgatgcagagcttaaaaagcacttttgtaggagtagatgtttctttgtcggcttaccttgtgatgaaaacagtttcttagatcctttgCCTA-CAGAC-TGGGCATTGT-CTGAAATA-AT-TCTCAG-AGAA--CAC----AAAAG---TC-AAGGAGAA--A-GA--ATGATATCGGTTA-CA-G--AA--TT----TGA-AGAGAGTTGT-T----TTGGGGAAAAC-GAAGAGAA--ATACACA-CAAATGAGGGAT-AT-CCTAAAGTTCTACCATGATATTGGCGTACTA--CTA-TACTTTGACGAGAG-TT--CTCTAGCCGAA--ACAGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATG---TCAGGGATATTGTTGATAGC-AACCGC-GATTGG----CTTTCCTTTTA-CAAAA-GT-GGTCACAT-CCTAGACAG--ACTTTTGACCACTATTTGGAATAGTCGGAACTTTGAAATTAGTCACTGGGAAAGCAATCAAAA--CAAAGCAAAC---TTGTT-GCAA-CA-T-ATGCAGC-G-AC---TTGttggttggattttgaagtagttcgtgtggaggttcaagacgctctgcgttttttcaatgacatcggtatgattctttacttcaatgaaaatggactctcagaatcactggttactgatgtccaatggtttgttgattctttcaaatttatcatatcagacagaaagcatgtcagagatttagcgaaaactgaccaggactggcaatatttccaccaatcaggatatct
gi|13 : taT-CTGAAGTC-GT-ACTCAG-GGAA--CTC----AGAGG---AC-A--GAAAATGA-GA--ATGACATCGGTTG-CA-A--AAATTT----CAA-AGA-AGT-GT-T----TTGGTGAAAAC-AAAGATAA--GTATTCA-CAAATAAAGGAT-AT-CCTAAAGTTATACCATGACATAGGCTTGATA--CTA-CACTTTGACGAGAG-TT--CTCTTGCCGAT--TCTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACTG-ATCC--AAACCACG---TCAGGGATATTGTTGATAAC-AATCGT-GATTGG----TTTTCCTTTTA-CAAAA-AT-GGTCATAT-CCGCGACAG--GCTTTTGAAAACAATTTGGAACAGACAGCACTTTACAAT
gi|9 : ATGACATCGGTATGATT--CTT-TACTTCAATGAAAA-TGGACTCT--CAGAATCACTG--G-TTACTGATGTCCAA-TGGT-TT-GT-TGATTCTTTCAAA---TTTATCATATCAG-ACAG--AAAGCATG---TCAGAGATTTAG-CGAAAACTGACCAG-GACTGGCAATATTTCCaaa
gi|11 : ggataaggacgagttttatgataaccttttggatttgctaccaaaagatgatgcagagcttaaaaagcacttttgtaggagtagatgtttctttgtcggcttaccttgtgatgaaaacagtttcttagatcctttgtccgacctagaaaactgtattgtttctatcgcgaaagaagacaaatggaaagaatctattcccaaggcatggtcatttatggaattggtgttcatgaatttgaaaaaaggggttaaaagtgaaagaatttttgaccagcaggtaatttcaagaattatttctatcagcgagctcgaagagagatattggttggattttgaagtagttcgtgtggaggttcaagacgctctgcgttttttcaCTGAT--TCCATTA-TTCTTGATGTTCAG-TGGT-TT-GT-GAATGCCTTCAAA---CACATTATAACAG-ATGA--AGAGCATGCAATGAGTGATATaccaatcaggatatct
gi|16 : aactgcactaacattgttcaatgacattggcgttattctcttccacacttcctCAA-TGGT-TT-GTCTGATTCTTTCAAGTTTATCAT-GTCAGGG-A-CA--AAATCATG---TCCGAGATGTTGagaggacaaacatttcaatgaatggatgaagttcaccgagaatggaattttgccaaagaacctagtgaaagcaatctggaaaggaccagagttattcactgagcacacagaagatctaatcattcacatgatcagacttgggatgattgctgaaatggaagagggagaaacattttatgtcccttgcatgaacaaacaaaagtatgacaaggctgtcttaaacaactgtacttgttcttccactgtttgcttcatgtttgaatatctgccattggtgattttccaccgcttagttgctacctgcatgacaaag
gi|2 : cagaatcactggttactgatgtAGAAATCAGAG--CAAAACAAAT---TTGTT-GCAA-TA-T-ATGCAGC-G-GC---TTGGTCTCA-T-CGCAGTTGGTACAGACACGCA--TTACATCCCCT-GTATGAACAAGT-TG-ACCTTT-GGTAGCAAGG-AAGAGAGC-T-TT-GTTC-G-CTCTATCAAAAGTAAAACATCGGTATTGGTCTTTCGATTTCATTTTCTGCCATA-TTTCTTTT----ATTT---CCGT-CTTAT--TGTTGCCT-GT--ATGAC----GAAAAC-CA-------ATC--G-TGA-ATGGA------TCG-T----T-T--TGAACAACA-ATGGAC---TTTG--------TCTC--T----TC-A---AA-AA-TGTC-GCTTG-TTTT--G-TCTATAA-GCG-ACATGTTGTAG-CGTT-----GGC-TGTGAATAAATATTCAATTCAGA--TTCAGG---T-TTTTC--AGCC-CAG-CC-A--A-ACGCCAAT--CGCA-A-AAG-ATGTCACA-CTAGAG-ATC--CGTGACA---ATATTGAAA-AATTGCTGAATGATCTCACAAGTAACT-TTCACAAGAA--AGT-GATGT-ACACTGTGGGGTATCAA-TGTTCAAA-GCAGGAAGTGTTC-AGAGAACATG-ATGAC-------TGTTTTA---TC---AAAGAGAC--TGAAA---TTTATA--GGAA-----AGGGGAAATTACTTGTC---CAG-AAC--ATGGGATGTTCAATCATCACACTCTGAGTGAATCCGCTCT-TTTA-GGCTATTGGAA-ACAGGTA-----TCT--TAATC-C-GGAAG-------TGT--TTAATAG------------T--TGA-TAATT-TATTATTTCAAATGACAATGTAT--------AC-ATACAATGCACACCGTTATAGTTTTATTTTgcggaaactgacaaggattggcaaatttcaaaccgatgcaggatatc
gi|18 : tgctttttgtaaatttcatacaaatttctgatatttacattgtaggattctaacatgttgtacaacagcatactggattatctaaaagatgataagcacctgaagccgcacctaagtagaaaacgatgcttcgttctgggttttaagtcagatggttcatttttccaggacgcactttctgaactagagaagtgcatagtttcatttgctaaagaagagaggtggaaagagacaattcctacagactgggcagtgtctgaagtcgtactcagggaactcagaggaaagaaaaagagaatgatgtcggttgcacaattatcgcagaaatgttttggtacaatccaggagaaatacgcacaaatgaaagatatcataaagctctaccatgatataggcgttatactacactttgaggagagttctcttgccgaaactgtcatcattgacatcaagtggtttgttgattgctttaagaacataataactgatccaaaccatgtcagagatattattgataacaaccgtgattggctttccttttacagaagcggtcatatcctagacagacttttgaccactatttgggatagtcagctctttgaagtggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattAAAGCAAAA--CA--GCAGCG---TTGTTTGCAAATAAT-ATG--GCCG-GCCCTTTGGCTTCA-T-CGCAGTTGGTACAGACACACA--TTACActttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|7 : --CAAAATGAATCGCTTGCT-ACAA-TA-T-ATGCAAC-G-GC---TTGGTCTCA-T-TGCAGTTGGTAAAAACAAACA--TTACATCCCCT-GTATGAACAAGA-TG-ACCTTT-GGTATCAAGG-AACAGATC-T-TTT-TTC-AATCTTA-CCAAAGTAAAACATCGGTATTGGTCTTTCAATTTCATTTTCTGCCATA-TTTCTTTT----ATTT---CCGC-CTTAT--TGTTGCTT-GT--TTGAC----GAAAAC-TA-------A-A--AGCAA-ATGGG------CCG-T----T-TT-GAAA-GACA-ATGGAC---TTTG--------TCTT--T----AC-A---AA-GACC-TC-GCTTG-TTTT--G-TTTATAA-GCG-ACATGTTGTAG-CGCT-----GGC-TGTGCATAGATGTTCAATTCAGC--TTCAGG---TCTTT-C--AGCC-CAGGC--A--A-GGGTCAATCATG-----AAAGATGTCACA-TTAGAA-ATC--CGTGACG---ACATTGAAA-TGTTACTGAATGGTCTCACAAGTAACT-TTCACAAGAA--AGT-GATGT-ACAATGTAGGATATCAA-TGCTCAAT-GCAGGAAGTGTTT-CGAGAACATG-ATGCC-------TATTTTA---TC---AAAGAGAA--AGGAA---TTTACG--GGAA-----AGGAGAAATCACCTGTC---CAG-AAC--ATGGAATGTTCAATCATCATATCCTGAGCGAATCCGCTCT-GTTA-GGCTATTGGAA-ACAGGTA-----TCG--TCATT-C-TTTGGTTTTTGACAG--TTCATCATTT---AT---TT--TT--CAGGTACTTTATTTCAAATGACAATGTAT--------GCAATCC-ATGCA------AATCATCTTAGTTT
gi|10 : ccttgggtgatagaacggaacgCTTTCATTTTTAATT---GCCATAACTTTTTTTCCATACTTATCCCGCTCTTATGTTGGC-CTCTGTGCTAGACCGGAAAAAATACATTTATATATT--GGTGCCGTGGAGCCGAATCG-TGCCTT-T--GGAATGACATATGGACGCCTTTGCTCTGGCATTTC--TTAGCAC-AGAGAA-ACCT-TC-GCTTG-TTTTCCG-TCTATAATATGTACATGTTGT-A-TGAGCACTTGGCATGTGAATAGATATTCAATTCAGC--T-CAGGTTCT-TTT-CAAAGCCTCAGCC--AACG-G--ATAAT--CGTG-A-AA-GATGTCACA-CTAGAACATC--CGTGATAGATATATTGAAATGATTGCTGAATGG-CT--CAAGTAATTGTTCACAAGAAATAATGGGTGTAACAATGTAAGGTATCAACTG-TTAAA-GCA-GAGGTGTTTCCGAGAGCACGCATGACTCCCGCTTGTTCTAAAGTTAGGGAAGAGAACTAGAAAATTTCTATGGAGGAACTGTGAGAGAGACATATCTGTCTGTCAGCAACGGGTGGAATG-TTCATTATCacaatgttttccttttttctacaggatgtcaaagtaacaggtatgaatctttatttaagatcccgattaaatgaacattgtttcaaaaaaatacattt
gi|14 : TTCATTTTCTGCCATA-CTTCATTT---T-TTT---TCGG-C-TGC--TCGTGGCCTGT--TTGAC----GAAGAC-CA-------ACAGTGGAGA-ATGGG------CCA-T----TCT--GGAA-GACA-AAGGGC---TTCG--------TTTG--T----TC-A---AA-AACG-TG-GCGTG-TTT-----TCTCTA
gi|17 : TTG--------TCTC--T----AC-A---AA-AA-TGTT-GCTTG-TTTT--G-TATATAA-GCG-ACATGCTGTAG-CGCT-----GGC-TGTGCATAGATATTCAATTCAGAT-T-CAGG---T-TTT-C--cnggtcattata
gi|15 : GAGAA--AGAAA---TTTATG--GAAA-----ACGAGAAATTTCTTGTC---CAG-AAC--ATGGAATGTTCAATTATCATATTCTGACTGAGTCCGCTCT-TATA-GGCTACTGGAA-ACAGGTA-----TAT--TCATC-C-TTAGG-------TGT--Tc
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|20 ): GGATAAGGACGAATTTTATGATAACCTTTTGGATTTGCTACC
Alignments
lowQualScore : 1 111 1 111 1 22222222 111 3333 11 11 111111 11111 111 2222 11111111 6666666666666666666666666666666 1111 11111111 222 1 1 1 11 11 1111 1111111 111111 11111 22222 11111 22222222 1 22222222 22222222 1
lowQualScore : 1 0 444 0 1 444 0 5 77 888 5 5 77777777 999 888 5 4 1 666 77 1 11 000 1 5 5 5 1 5 66 1 5 5 0 4 2 4 1 5 4 1 4 4 4 4 4 8888 55 8888 55 11 4 11 1 55 4 99 222222 0 6 8888 4 44 55 1 4 0 0 4 4 1 0 33 3 55 9 44 3 3 3 3 3 0 555 1 1 3 44 1 0 7 3 55555 4 666 66 777 1 11 1 2 1 0 7777 0 0 2 77 55 2 4 8 4 4 1 3 4 777 4 4 1 66 5 666 5 5 5 222 1111 4 2 1 777 4 4 9999 777 55 1 77777777 66 6666666666666666666666666666666 777 4 4444 8 4 777 44444444 666 99999 55 5 44 55 1 4 1 4 777 0 4 4 1 777 66 66 5 5 0 5 22 11 11 33 5 5 66 888 5 0 0 66 5 2 1 0000 5 5 5 5 1 5 6666666 444444 2 66 777 66 11111 4 6 777 4 66 1 1 1 1 0 5 11111 22222 66 7777 0 00000000 5 0 0 5 3 44444444 77 1 66 66 7 2 1 44444444 4 1 6 2 0
lowQualScore : . . ... . . ... . . .. ... . . ........ ... ... . . . ... .. . .. ... . . . . . . .. . . . . . . . . . . . . . . . . .... .. .... .. .. . .. . .. . .. ...... . . .... . .. .. . . . . . . . . .. . .. . .. . . . . . . ... . . . .. . . . . ..... . ... .. ... . .. . . . . .... . . . .. .. . . . . . . . . ... . . . .. . ... . . . ... .... . . . ... . . .... ... .. . ........ .. ............................... ... . .... . . ... ........ ... ..... .. . .. .. . . . . ... . . . . ... .. .. . . . . .. .. .. .. . . .. ... . . . .. . . . .... . . . . . . ....... ...... . .. ... .. ..... . . ... . .. . . . . . . ..... ..... .. .... . ........ . . . . . ........ .. . .. .. . . . ........ . . . . .
lowQualScore : 0 0 888 0 0 000 8 0 99 999 0 0 99999999 555 999 7 0 0 777 99 0 44 000 0 7 7 7 0 7 44 4 0 0 5 2 2 2 0 0 4 7 0 0 0 0 0 5555 55 7777 55 00 0 00 4 55 0 55 222222 7 2 5555 0 55 55 0 4 1 1 4 4 0 1 88 6 00 4 66 3 3 3 3 3 8 888 4 0 3 66 0 6 3 6 33333 4 666 33 111 1 11 1 7 0 4 9999 7 9 2 77 55 3 0 0 0 0 0 0 0 000 4 4 0 11 0 222 0 0 0 222 2222 0 3 4 888 4 4 4444 888 33 7 22222222 11 2222222222222222222222222222222 999 4 9999 9 4 888 55555555 222 55555 55 7 77 55 0 4 9 4 888 1 4 4 0 333 11 99 0 0 0 0 00 99 11 22 0 0 99 888 0 2 4 99 0 2 0 6666 0 0 0 0 0 0 2222222 444444 2 11 888 11 11111 4 4 888 4 11 0 1 4 1 2 0 22222 55555 99 5555 2 55555555 0 1 8 0 0 44444444 99 0 77 11 5 5 0 22222222 7 0 7 8 2
consensus : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AATT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAAA-G-CGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAA-------------------CG--G--G---CGAATGG-GTCGT-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CAAA--AACGT-CGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-GAGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TCATAAT-TTAT------T-T--TNA-CAAGTACATTATTTCNAATGACAATGTAT--------ACAATNC-ATGCACATCGTTTTAGTTT
Reference ( family-4307 ) : ATGGCTTNAA-ATN--AT-CCNTGTTT---CTTGTAGAATTTC--CTN--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGCTN--TA-CGACAGCATACTGGATTACCTNCAATACGACAAGCAC--CTGAAGNCGCACCTAGNCAG---AGAACGNTGCTTCGTTCTAGGTTTTAAG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AATT-TNGAGAGAATTGTT----T-TGGTGAAAACG-AAGAGAAATA--CNCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTTGCCGAA--ACTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAAA-A-CGGTCATAT-CCTAGACAG--NCTTTTGACCACNATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTANAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAA-------------------CG--G--G---CGAATGG-GTCGT-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CAAA--AACCT-CGCTTGTTTT--GTCTNTAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGNATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCAAAAGGATGTCACA-CTGGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-GAAAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCACACCCTGAGTGAATCCGCTCTCTTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TCATNAT-TTNT------T-T--TNA-NAAGTACATTATTTCNAATGACAATNTAT--------ACGATNC-ATGCATATCGTTTTAGTTT
gi|1 : GCTTTAA-ATG--AT-CCATGTTT---CTTGTAGA-TTTC--CTC--TAAATTCCTT-A-TATTTT----T--ATTGC-AGGACTCCAACACGTTA--TA-CGAAAGCATACTGGATTATCTCCATTTCGACAAGCAC--CTGAAGACGCACCTAGACAG---AAAACGCTGCTTTGCTCTGGGTTTTAGG-TC-GAAT-GGTTCATTAT-TC-GAGGACATGCTTTCAGAA-TTAGAGAA-GTGCATAGCTTCAATTGCTGAAGACGAGAGGTGGAAGGATACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAGTC-GT-ACTCG-G-G----GAA--CTCAGAGG----AAA--GAAAATGAG-A--ATGATATCA--GTTT-CAG--AACT-TTCAAAGAATTGTT----T-TGGTGACAACA-AAGAGAAATA--CTCAC-AAATGAAGGATA-T-CCTAAAGTTCTTCCATGATATAGGTGATCTACTA-TACTTTGACGAGAA-TT--CTCTTGATGAA--ACTGTCA-TCATTGACATCCCG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCA--AAACCATATCATGGATTTTCTTGTTAAC-AACCCC-GATTGGC----TTTCCTTTT-ACAATA-G-TGGCCATAT-CCTAGACAG--GCTTTTGACCATCATTTGGAATATACAGAACTTTGACTTTGGTTACTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-ACAA-TA-T-ATGGAACG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACACACT--TTACATCCCGT-GTATGAACAAA-AGG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTC-TCCAA-TCTATTCAAAGAAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---TCG-TCTTATTGTTG--CT---TGTTTGAC--GAAAACCAA-------------------TG--G--T---C-AATGG-ATCGT-TAT--GAAA-GACA-ATGGAC---TTTG--------CCTC--TA----CAAA--AATGT-CGCTTGTTTT--GTCTTCAA-GGA-ACATTCCGTA---GCGTT-AGC-GGTGGATAGATATTCAATTCAAC-TTCAGGTT--TTTCA--GCC-CAGCC-AA-GTATCAAT--CGC-GAAGGATGTCACA-CTAGAA-ATT--CGTGACA---ACATTGAAC-GATTACTGAATGGTCTCAC--AAGTAATT-TTCATAAGAAAGTTATA----TA-CACTGTAGGATATCAA-TGTTCAAT-GCAAGAAGTGTTTC-GAGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----GG-GAATAATGACTTGTC---CAG-AACA--TGGAATGATTAACCATCATCCCTTGAGTGAATCTGCTCTCTTAGGTTATTGGAA-ACAGG-----TA-----ACTTC--ATC-TATACG-------TGTT-TTATAAT-TTATCCTTTAT-T--TCA-AGAGTAAATTATGCACAATGGCCATATAA--------ACATTTC-ATTCACATTGTTTCAGTTT
gi|10 : ttTTTCATTTTTAATTGCCATAACTTT-TTTTCCATACTTATCCCGCTCTTAT-GTTGGCCTCTGTGCTAGACCGGAAAA--AATACATTTATATATTGGTGCCGT-G--GAGCCGAATCG-TGCCT-T-T--GGAATGACATATGGACGCCTTTGCTCTGGCATTTC--TTAGCACAGAGAAACCTTCGCTTGTTTTCCGTCTATAATATGTACATGTTGTATGAGCACTTGGCATGTGAATAGATATTCAATTCAGCT--CAGGTTCTTTTCAAAGCCTCAG-CCAACGGAT-AAT--CGTGAAAG-ATGTCACA-CTAGAACATC--CGTGATAGATATATTGAAATGATTGCTGAATGG-CTCA----AGTAATTGTTCACAAGAAA-TAATGGGTGTAACAATGTAAGGTATCAACTGTT-AAA-GCAG-AGGTGTTTCCGAGAGCACGCATGACTCCCGCTTGTTCTAAAGTTAGGGAAGAGAACTAGAAAATTTCTATGGAGGAACTGTGAGAGAGACAT-ATCTGTCTGTCAGCAACGGGTGGAATGTTC-ATTATCataatgataatatttcttttattcaggatgtcctagtcgaagtaagaggtaagtctcttcatttacgatattgattaactgagcacagtgattacaaataattcat
gi|11 : cCTAACATTGTTCAATGACATTGGCGTTATTCT----CTTCCAC---AC-TT--C-CT--CTGAT--TCCATTA-TTCTTGATGTTCAG-TGGT-TT-GT-GAATGCCTTCAAA---CACATTATAACAG-ATGA--AGAGCATG
gi|12 : aactgcaCCTA-CAGACTGGGCATTGT-CTGAAATA-AT-TCTCA-G-A----GAA--CACAAAAGTC--AAG--GAGAA--AG-A--ATGATATCG--GTTA-CAG--AATT-TGAAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CACAC-AAATGAGGGATA-T-CCTAAAGTTCTACCATGATATTGGCGTACTACTA-TACTTTGACGAGAG-TT--CTCTAGCCGAA--ACAGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGGGATATTGTTGATAGC-AACCGC-GATTGGC----TTTCCTTTT-ACAAAA-G-TGGTCACAT-CCTAGACAG--ACTTTTGACCACTATTTGGAATAGTCGGAACTTTGAAATTAGTCACTGGGAAAGCAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-CA-T-ATGCAGCG-AC---TTGcaatgagtgatatagaggacaaacatttcaatgaatggatgaagttcaccgagaatggaattttgccaaagaacctagtgaaagcaatctggaaaggaccagagttattcactgagcacacagaagatctaatcattcacatgatcagacttgggatgattgctgaaatggaagagggagaaacattttatgtcccttgcatgaacaaacaaaagtatgacaaggctgtcttaaacaactgtacttgttcttccactgtttgcttcatgtttgaatatctgccattggtgattttccaccgcttagttgctacctgcatgacaaag
gi|13 : taT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----ACA--GAAAATGAG-A--ATGACATCG--GTTG-CAA--AAAT-TTCAAAGAAGTGTT----T-TGGTGAAAACA-AAGATAAGTA--TTCAC-AAATAAAGGATA-T-CCTAAAGTTATACCATGACATAGGCTTGATACTA-CACTTTGACGAGAG-TT--CTCTTGCCGAT--TCTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACTG-ATCC--AAACCACGTCAGGGATATTGTTGATAAC-AATCGT-GATTGGT----TTTCCTTTT-ACAAAA-A-TGGTCATAT-CCGCGACAG--GCTTTTGAAAACAATTTGGAACAGACAGCACTTTACAAT
gi|14 : TTCATTTTC---TGCCATA-CTTC-ATTT----TTTT---TCG-GCTGCTCGTGG-CCT----GTTTGAC--GAAGACCAA-------------------CA--GTGG---AGAATGG-GCCAT-TCT--GGAA-GACA-AAGGGC---TTCG--------TTTG--TT----CAAA--AACGT-GGCGTGTTTT--CTCTaaa
gi|15 : GAGAA--AGAAA---TTTATGG--AAA-----AC-GAGAAATTTCTTGTC---CAG-AACA--TGGAATGTTCAATTATCATATTCTGACTGAGTCCGCTCTTATAGGCTACTGGAA-ACAGG-----TA-----TATTC--ATC-CTTAGG-------TGTT-TGA-AAT-TTacnggtcattata
gi|16 : --ACTG--G-TTACTGATGTC-AA-TGGT-TT-GTCTGATTCTTTCAAGTTTATCAT-GTCAGGG-A-CA--AAATCATGTCCGAGATGTTGGCGGAAACTGACAAG-GATTGGCAAA-TTTCc
gi|17 : cagaatcTTG--------TCTC--TA----CAAA--AATGT-TGCTTGTTTT--GTATATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGCATAGATATTCAATTCAGA-TTCAGGTT--TTCCaaaccgatgcaggatatc
gi|18 : AAAG-CAAAA--CA--GCAGCGTTGTTTGCAAATAAT-ATGGC-CG-GCCCTTTGGCTTCA-T-CGCAGTTGGTACAGACACACA--TTACA
gi|19 : GTTTAAA-ATT--AT-ACATGTTT---CTTGTACA-TTTC--CTA--TAAACGACTG-A-TATTTA----T--ATTGC-AGGACTCCAACATGTT
gi|2 : atTGCTT---TTTGTA-AATTTC--ATA--CAAATTTCTG-A-TATTTA----C--ATTGT-AGGATTCTAACATGTTG--TA-CAACAGCATACTGGATTATCTAAAAGATGATAAGCAC--CTGAAGCCGCACCTAAGTAG---AAAACGATGCTTCGTTCTGGGTTTTAAG-TC-AGAT-GGTTCATTTT-TC-CAGGACGCACTTTCTGAA-CTAGAGAA-GTGCATAGTTTCATTTGCTAAAGAAGAGAGGTGGAAAGAGACAA-TTCCTA-CAGACTGGGCAGTGT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----AAA--GAAAA--AG-AGAATGATGTCG--GTTG-CAC--AATTATCG-CAGAAATGTT----T-TGGTACAATCC-AGGAGAAATA--CGCAC-AAATGAAAGATA-T-CATAAAGCTCTACCATGATATAGGCGTTATACTA-CACTTTGAGGAGAG-TT--CTCTTGCCGAA--ACTGTCA-TCATTGACATCAAG-TGGT-TT-GT-TGATTGCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATTATTGATAAC-AACCGT-GATTGGC----TTTCCTTTT-ACAGAA-G-CGGTCATAT-CCTAGACAG--ACTTTTGACCACTATTTGGGATAGTCAGCTCTTTGAAGT
gi|2 : AGAAAT-CAGAG--CAAAACAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTCA-T-CGCAGTTGGTACAGACACGCA--TTACATCCCCT-GTATGAACAAG-TTG-ACCTTT-GGTAGCAAGG-AAGAGAGC-T-TT-GTTCG-CTCTATCAAAAGTAAAACATCGGTATTGGTCTTTCGATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT----GTATGAC--GAAAACCAAT------------------CG---------TGAATGG-ATCGT-T-T--TGAACAACA-ATGGAC---TTTG--------TCTC--TT----CAAA--AATGT-CGCTTGTTTT--GTCTATAA-GCG-ACATGTTGTA---GCGTT-GGC-TGTGAATAAATATTCAATTCAGATT-CAGGTT--TTTCA--GCC-CAGCC-AA-ACGCCAAT--CGCAAAA-GATGTCACA-CTAGAG-ATC--CGTGACA---ATATTGAAA-AATTGCTGAATGATCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CACTGTGGGGTATCAA-TGTTCAAA-GCAGGAAGTGTTCA-GAGAACATG-ATGACT-------GTT------TTATCAAAGAGAC--TGAAA---TTTATAG--GAA-----AG-GGGAAATTACTTGTC---CAG-AACA--TGGGATGTTCAATCATCACACTCTGAGTGAATCCGCTCTTTTAGGCTATTGGAA-ACAGG-----TA-----TCTTA--ATC-CGGAAG-------TGTT-TAATAG--------------T--TGA-TAATT-TATTATTTCAAATGACAATGTAT--------AC-ATACAATGCACACCGTTATAGTTTggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattagaaatcagagcaaaacaaatttgttgcaatatatgcagcggcttggtctcatcgcagttggtacagacacgcattacatcccctgtatgaacaagttgacctttggtagcaaggaagagagctttgttcgctctatcaaaagtaaaacatcggtattggtctttcgatttcattttctgccatatttcttttatttccgtcttattgttgcctgtatgacgaaaaccaatcgtgaatggatcgttttgaacaacaatggactttgtctcttcaaaaatgtcgcttgttttgtctataagcgacatgttgtagcgttggctgtgaataaatattcaattcagattcaggtttttcagcccagccaaacgccaatcgcaaaagatgtcacactagagatccgtgacaatattgaaaaattgctgaatgatctcacaagtaactttcacaagaaagtgatgtacactgtggggtatcaatgttcaaagcaggaagtgttcagagaacatgatgactgttttatcaaagagactgaaatttataggaaaggggaaattacttgtccagaacatgggatgttcaatcatcacactctgagtgaatccgctcttttaggctattggaaacaggtatcttaatccggaagtgtttaatagttgataatttattatttcaaatgacaatgtatacatacaatgcacaccgttatagttttattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|3 : tgctttttgtaaatttcatacaaatttctgatatttacattgtaggattctaacatgttgtacaacagcatactggattatctaaaagatgataagcacctgaagccgcacctaagtagaaaacgatgcttcgttctgggttttaagtcagatggttcatttttccaggacgcactttctgaactagagaagtgcatagtttcatttgctaaagaagagaggtggaaagagacaattcctacagactgggcagtgtctgaagtcgtactcagggaactcagaggaaagaaaaagagaatgatgtcggttgcacaattatcgcagaaatgttttggtacaatccaggagaaatacgcacaaatgaaagatatcataaagctctaccatgatataggcgttatactacactttgaggagagttctcttgccgaaactgtcatcattgacatcaagtggtttgttgattgctttaagaacataataactgatccaaaccatgtcagagatattattgataacaaccgtgattggctttccttttacagaagcggtcatatcctagacagacttttgaccactatttgggatagtcagctctttgaagtggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattTTGTA--ATTTT--CTAAATAAAATTTCG-A-TGCTT---------TT-T-AGGATCGTGATACGCTG--TA-CTACAACATACTGGATTGCATTCAGGACGACAAACAT--CTGAAGCAACACTTAGCAAG---AGAGCGATGCTTTGTTCTTGGTTTTAAA-TC-TGAT-GATTCATCAT-TC-GAGGACACGCTTTTTGAA-TTAGAGAA-GTGCATAGTTTCGATTGCTATGCAAGACAGATGGAAGGAATCCA-TTCCTA-CGGACTGGGCACTGA-CTGAGGTC-GT-ACTCA-G-A----AAA--CTCAGAGAAC--AAA--AAAAG--AG-A--ATGATATCA--GTTA-CAG--AATTATCGAG-GAAATGTT----T-TGATAAAAACA-AAGAAAAATA--TACAC-AGATCAACGACA-T-TCTAAAATTTTACCATGATATAGGCGCTATCCTA-CACTTTGACGAGAG-TT--CTCTTGCCGAC--ATTGTCA-TCGTTGACATCCAG-TGGT-TT-GT-TGATTGCTTCAAG---AACATAATAACCG-ATCC--AAACCATGCCAGGGAGCTTGTCCACAAC-AAAGGC-GAATGGT----TAGCGTTTA-ACGAAA-A-CGGTCATAT-ACAAGACAG--TCTCTTGACCAATATTTGGAGCAGTCGACAGTTTGAAATTAATT-CCG---ATGACA---AAAA--C------AATCTGTT-AAAA-TA-C-ATGGAACG-TC---TTGGTCTTA-TCTATA-TTGGCAGAGAGGCACA--TTTTATCCCTT-GCATGAACAAG-CGG-ACCTTC-ACGACCGAAC-AAAAGAACAA-ATTG-CAAACTT--TCCCAAGTCAAACGTCTGTCCTGGTCTTCCGGTTTCCATTTC---TGCCATA-TTTC-ATTT----ATTT---CCG-TCTGATTGTTG--CT---TGTCTGAC--AAAGACCAA-------------------TG--G--A----GAATGGAG--AT-T-TCCAAAA-GACA-AAGAA-----TTG--------TCTTTATA----CAAA--AACCT-AGCGTGCTTT--CTCTGTAA-GAG-CCACACTGTA---GTCCT-TGC-TGTCAATAAATATTCAGTTCAGC-TTCAGGTT--TTTCA--CCC-CAG-C-AATGTTTCAAT--CCCACAA-ACTGTTACA-TTGGAA-ATC--CGTGCTG---ATATTGAAA-AGTTACTGAGGGGTCTCAC--CAGTAACT-TTCACAAAGAAATCATG----TA-CACTGTAGGATATCAA-TGCTCACA-GCAGGATGTGTTTC-GTGAACATG-ATGATT-------GTT------TCGTGGAAGAAAA--AGATA---TTCAGGG--GAA-----AG-GCAAGCAGACTTGCC---CAA-TCCA--CGAGATGGCTAATTTCCATACCCTGAATGAATCAGATCTCCTTCATCATTGGAA-TAAGG-----TATATTGTTTTT--A---GATAGA-------TGTTATC-CGAT-ACATCA----T-T--TAA-GAA--ACATTA-CTCTTAT--CAAGTTAT--------AC---CT-ATACACATtattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|4 : atttttgatATTCT--CTC--TAAGTTT-TGCA-TATTT-----TCGATTTT-AGAATGCCAACACGCTC--TA-CTACAGTATACTGGATTACATACAGGATGACAAAGAG--CTGAGGTCACACTTATCCAG---GGAACACTGCTTCGTTATAGGATTTAAG-TC-GGAT-GGTACAGCAT-TC-CAAGACACGCTGTCTGAA-TTAGAGAA-GTGTATTGTATCTATTGCTAGACAAGACAGATGGAAAGAATCCA-TTCCTA-TTGATTGGGCACTGG-CTGAAAGC-GT-ACTCA-G-A----GAT--CTTAGAGG----AAA--GAAAA--AG-AGAATGGCGTCG--GTTG-AAG--ACTT-ATCATGGCAATGTT----T-TGGTCAAATCA-AAGAAAAATG--CTCAC-AAATCAGCGATA-T-CCTGAAGTTTTACCATGAAATAGGCATTATCCTA-CACTTTCCTGAGAG-TT--CGCTTGCCCAA--ACTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TAATGCCTTCAAG---AACATAATAACGG-ATCC--AAACCACGTCAGAGAATTTGTTATCAAC-CACCGC-GAATGGT----TGGATTTTA-ACAAAA-A-CGGCCATAT-TCAAGACAG--TCTTTTGACAAAGATTTGGAGTACTGGGGACTTTGAAA----TCGATAGGGAGG---------A--CAAAAGAGACTTGCT-ACAA-TA-C-ATGGAACG-CC---TTGGTCTCA-T-TTTTGTTGGAAAGAAGGCACA--TTACATTCCGT-GTATGAACAAA-CAG-ACATTT-GCTGTTGAAC-AACAGAAA-GATTTG--CAATCATTTCC-AAGTCAAACATCAGTATTGGTCTTCCGATTTCCTTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTGATTGTTG-CA----TGTTTGAC--ACAAACTGG-------------------TG--G--A----AACTGG-GTCATCC-T--GGAA-GACG-ATGGAC---TTTG--------TTTG--TT----TAAA--GACTT-GGCTTGCTTT--GTCTTTAA-AAA-TCATACAGTA---GCTTT-GTC-TGTGAACAAATATTCAATTCAGC-TTCAGGTT--TTTCA--TTC-CAG-CAAA-GGTTCAATTCCACAAA---TTGTTACA-TTGGAA-ATC--CGTGATG---ATATCGAAC-GATTACTGAAGGGTCTCAC--CAGTAATT-TTCACAAAAAAATCATG----TA-CACTGTTGGATACCAA-TGCTCAAA-ACAGGAAGTGTTCA-TTGAACACG-ATGACT-------GCT------TTGTTGAAAAGAA--AGAAA---TCCACGG--GAA-----AG-GAAGAATCACTTGCC---CAA-GACA--TGGAATGCGCAATCGCCACATCCTGGATGAATCAACTATCCTATTTCATTGG-A-ATAGGGTATTTA-----TTTTC--A---AATACG-------AATT-TCCT-ATGTTAT------TAT--CTA-TATCAACATCATTTtagtctaatcaattacaatttccatgtttcttttaacaggatgttctaggaaaaccaacaagtgagtaactataggaattgtatgaaataatatattatattagtttcaaaagtgtaattgcagttta
gi|5 : tgtttgcaaatgccttacctttatctttgCTCCTC-A-TATTT-----T--GTTTT-AGAGCTCCCACAAGCTC--TA-CGAGAACATACTGGATTACCTAAAGCACGACCAGCAT--CTCAAGAAACATTTGGCCAG---GGAACGATGTTTCGTTGTAGGGTTTAAG-TC-GGAT-GGTTCATCAT-TCGCAG-ATGCACTCTCTGGC-CTTGAGGA-ACGCATCGTTTCGATTGCAAACCAACCTAGATGGACGGAATCCA-TTCCAG-GGGATTGGGTAACTT-TTGAAGTG-GT-ACTTA-G-A----CAA--CTCA-AGG-A--AGATGGAAAG--AA-A--AT--TGTCCCTGTTA-AAA--CATT-GTCACAGCTATGTT----T-TGGTGACAACA-AAGAAAAATC--CAAAC-AAATCAGCGATG-T-CCTGAGATTTTACCATGATATAGGCGTTATACTT-CACTTTGACGCAGG-TT--TTCTATCCGAA--AATGTCA-TTCTTGACATCCAA-TGGT-TT-GT-TGATTCTTTTAAG---AATATTATCACCG-ATCC--AAACCATTTTGTGGAGCTGGTTGAGAAC-AACGAT-GATTGGC----GTGCTTTTA-ACGACA-A-CGGGCACATATCT-GACGA--TCTTTTGACGAAGATTTGGACAAGTCAGGAATTTAGAATCA--------------AAC-CAGATGTCAAAGTAAGCTTGTT-GCAA-TA-C-ATGGAACG-TC---TTGGTCTCA-T-TTACGCCGGTCGAGAGGCGCA--TTATATTCCGT-GCATGAACAAG-TTG-ACCTTT-GGTAGCAATG-AAGAGGAA-TATCTGC---GTTCCATTCAAAATAAAACATCAGTTTTGGTCTTCCGATTTCAATTTC---TGCCATA-CTTC-ATTT----TTTT---CCG-GCTGATCGTTG-CCT----GTTTGAC--GAATACCAA-------------------CAATG--G---AGAATGG-GACAT-TCT--GGAA-GACA-AAGGAC---TTCG--------TTTG--TT----CAAA--AACGT-CGCGTGTTTT--CTCTTTAG-ATG-TCATACAGTA---ATTCT-GGC-TGTACACAAACATTCAATTCAGCTT-CAGATC--TTCCA--GCC-TAG-C-AATGACTCAAT--CA-AGAAGGATGTTACT-CTGAAA-GTT--CGTGACG---ATGTTGAAA-GATTACTGAAAGAACTGACTGAA--AACT-TTCACAAGAAAATCGTG----TA-TACTGCAGGATATCAA-TGTTCAAATACAGCAG--GTTTC-ATAGATATG-ATGACT-------G-C------TTGTCTGAGAAGA--AAAAA---TTCGT-G--GAA-----AG-GAAAACTCCCATGTC---CGA-AACA--TGGAATGCTAAATCATCACGAACTGAAGGAGTCAACTCTTCTATATCATTGGAATGC-GGTAT--TA-----TTTTCTTATCAAACAAA-------AAAT-CCAT-AT-TTAT------T-TTGTTATCAAGAACAAACTTTC--ATTACAATCCATTATTTAGAACGATGA-ATG-ATATtttctcattttcgtatataggtataaagaattgtatacatcattttcagttaataatgatgataattttcttttaactaggatgtcctggccgtaccaaccggtgagtaag
gi|6 : ATAGCTTGAG-ATA--AT-CTGTGTTT---C--GTAGAATTTC--CTC--TCAACTTCTG-A-TATTTA----C--ATTAC-AGGACTCCAACACGTTA--TA-CAACAGCATACTGGATTATCTCCAATTCGACAGACAC--CTGAAAACGCACCTAGATAG---AAAACGCTGCTTTGTTCTAGGTTTTAGG-TC-AGAT-GGTTCCTTTT-TT-CAGGACACGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCAGTTGCTAAAGAAGATAGGTGGAAGGAAACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAATT-GT-ACTCA-G-A----GAA--CTCAAAGGTC--AAG--GAGAA--AG-A--ATGGTGTCG--GTTA-CAG--AATT-TAGAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCACGATATAGGCGTGCTACTA-CACTTTGATGAAAG-TT--CTCTAGCTGAA--ACTGTCA-TCATTAACATCCAA-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATCGTTGATAAC-AACCGC-GACTGGG----TTTCCTTTT-ACAAAA-G-TGGTCACAT-CCTAGACAG--GCTTTTGACGACTATTTGGAGTATTCGGAACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTTA-T-TGCAGTTGGTACATACGCACA--TTACATTCCGT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AAGAGAAC-T-TTTGTTCAACTCCATCCAAAATAAAACATCGGTATTGGTCTTTCGATTTCAATTTC---TGCCATA-CTTCTTTTT----ATTT---CCG-ACTTATTGGTG-CTT---TGTTTGAC--AAAAACCAA-------------------TG--G--G---CGAATGG-ATCGT-T-T--GGAG-GACA-ATGGAC---TTTG--------TCTC--TA----CAAA--A--TT-TGCTTG-TTT--GTCTATAA-GCG-ACACGCTGT----GCGCG-GGC-TGTGAATAGATATTCAATTCAGA--TCAGG-T--TTTCA--GCC-CAG-C-AG-GTTTTAATA-TGCAAAAGGATGTGACAGCTAGAA-ATCAGCGTGACA---ATATTGAGA-GATTACTGAATGGTCTAAC--AAAAAACT-TTCACAAGAAAGTGATG----TA-CAATGTCGGATATCAA-TGCTCAAG-GCAGGAAGTGTTTC-GCGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----AG-GAAAAATTACTTGTC---CAA-AACA--TGGAATGATTAATCATCATATCCTGAGTGAATCCGCTCTTTTGGTCTATTGGAA-ACAGG-----TA-----TCTTT--ATC-AATAGG-------CGTT-CCATCAT-TTCT------T-T--TCA-CAAGTACATTATTTCTAATGACAATGTAT--------ACAATGC-ATGCATATAATTTTAGTTTtttgccgctactaatgtgaatgttctttttttaattaggatgttcgagtggaaccaacgggtgagtaaat
gi|7 : GAACGGAACGCAAAA--TGAATCG--CTTGCT-ACAA-TA-T-ATGCAACG-GC---TTGGTCTCA-T-TGCAGTTGGTAAAAACAAACA--TTACATCCCCT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AACAGATC-T-TTT-TTCAATCTTA-CCAAAGTAAAACATCGGTATTGGTCTTTCAATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-CCTTATTGTTG-C-T---TGTTTGAC--GAAAACTAA--------------------A--A--G---CAAATGG-GCCGT-T-TT-GAAA-GACA-ATGGAC---TTTG--------TCTT--TA----CAAA--GACCT-CGCTTGTTTT--GTTTATAA-GCG-ACATGTTGTA---GCGCT-GGC-TGTGCATAGATGTTCAATTCAGCTT-CAGGTC--TTTCA--GCC-CAGGC-AA-GGGTCAAT--CATGAAAG-ATGTCACA-TTAGAA-ATC--CGTGACG---ACATTGAAA-TGTTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CAATGTAGGATATCAA-TGCTCAAT-GCAGGAAGTGTTTC-GAGAACATG-ATGCCT-------ATT------TTATCAAAGAGAA--AGGAA---TTTACGG--GAA-----AG-GAGAAATCACCTGTC---CAG-AACA--TGGAATGTTCAATCATCATATCCTGAGCGAATCCGCTCTGTTAGGCTATTGGAA-ACAGG-----TA-----TCGTC--ATT-CTTTGGTTTTTGACAGT-TCATCAT-TTAT------T-T--TT--CAGGTACTTTATTTCAAATGACAATGTAT--------GCAATCC-ATGCAAATCATCTTAGTTT
gi|8 : ccttgggtgataATGGCTTTGAGATGGAATACTTTGTTTGCGCTTA-GGAATTTCACCTC--TCAACTTCTG-AGTATTTAATTTT--ACTACCAGGACTCCAACACGTTAGTTAACAACAGCATACTGGATTATCTCCAATTCGACAGGCACACCTGAAAACGCACCTAGATAAGAAAGAACGCTGCTTTGTTCTAGGTTTTAGGGTCAGGATTGGTTCCTTTTCTC-GAGGACACGCTTTCTGAAACTAGAGAAAGTGCA-AGTTTCAGTTGCTAAAGAAGATAG-TGGAAGGAAACCAGTTCCTATCAGACTGGGCATTGTGCTGAAATT-GTCACTCA-GCA----GAAACTTCAAAGG-TCTAAG--GAGAA--AGGA--ATGTGGTCG---TTA-CAGG-AATT-TAGAGAG---TGTG----TGTGGGGCAAACGGAAGAGAAATATACGCACCAAATGAAGGATAATACCTAAAGTTCTACCACGATATAGGCGTGCTACTACCACTTTGATGAAAGTTT--CTCTAGCTGAA--ACTGTCATTCATTAACATCCAACTGGTGTTGGT-TGATTCCTT-AAG---AACATAATAACTGCATCCAAAAACCATGTCA-AGATATCGTTGATAAC-AACCGCAGACGGG------TTCCTTTTGACAAAATATCGGTCACAT--CTAGACAGGCGCTTTTGACCACTATTTGGGGTATTC-GAACTTTGAAATCAG-CGCTGGGAAAGACAT-C-AAA--CAAAGCAAA--TGTT-GCAAGTA-TAATGCAGCGAGC---TTGGTCGTATT-TGCAGTTGGTACATACGCACACCTTACATTCCGTAGTATGAACAAGACTGCACCTTGAGGT-TCAAGGAAAGAGAAC-T-TT--TCCAAacaatgttttccttttttctacaggatgtcaaagtaacaggtatgaatctttatttaagatcccgattaaatgaacattgtttcaaaaaaatacattt
gi|9 : cTCCGAC-CTAGAAAA-CTGTATTGTTTCTATCGCGAAAGAAGACAAATGGAAAGAATCTA-TTCCCA-AGGCATGGTCATT-T-ATGGAATTGGT-GTTCATG-AATTTGAA--AAAAGGGG-TTAAAA--GTGAA--AG-A--AT--TTTTG--ACCAGCAGGTAATT-TC--AAGAATTATTTCTAT-CAGCGAGCTCG-AAGAGAGATA--tcca
gi|9 : ggataaggacgagttttatgataaccttttggatttgctaccaaaagatgatgcagagcttaaaaagcacttttgtaggagtagatgtttctttgtcggcttaccttgtgatgaaaacagtttcttagatcctttgATGACATCGGTATGATTCTT-TACTTCAATGAAAA-TGGACTCT--CAGAATCACTG--G-TTACTGATGTCCAA-TGGT-TT-GT-TGATTCTTTCAAA---TTTATCATATCAG-ACAG--AAAGCATGTCAGAGATTTAG-CGAAAACTGACCAG-GACTGGCAATATTTCCttggttggattttgaagtagttcgtgtggaggttcaagacgctctgcgttttttcaatgacatcggtatgattctttacttcaatgaaaatggactctcagaatcactggttactgatgtccaatggtttgttgattctttcaaatttatcatatcagacagaaagcatgtcagagatttagcgaaaactgaccaggactggcaatatttccaccaatcaggatatct
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGATAAGGACGAATTTTATGATAACCTTTTGGATTTGCTACC
Alignments
lowQualScore : 1 111 1 111 1 22222222 111 3333 11 11 222222 11111 111 2222 11111111 6666666666666666666666666666666 1111 11111111 222 1 1 1 11 1111 1111111 111111 11111 22222 11111 22222222 3333333333333333 11
lowQualScore : 1 0 444 0 4 444 0 5 77 888 5 5 77777777 999 888 5 4 1 222 77 1 11 000 0 5 5 5 1 5 66 1 5 5 0 4 2 4 1 5 4 1 4 4 4 4 4 8888 55 8888 55 11 4 11 1 55 4 99 4 000000 0 2 8888 4 44 55 3 4 0 0 4 4 1 0 33 3 55 8 44 3 2 3 3 3 3 0 555 1 1 3 44 1 0 7 3 55555 4 66 66 888 1 11 1 2 1 0 7777 0 0 2 77 55 2 4 8 4 4 1 3 4 777 4 4 1 66 5 666 5 5 5 222 1111 4 2 1 777 4 4 9999 777 55 1 77777777 66 6666666666666666666666666666666 777 4 4444 8 4 777 44444444 666 99999 777 2 0 55 0 4 1 4 777 0 4 4 0 777 66 66 5 5 0 5 22 11 2 3 888 5 5 66 888 5 0 0 66 5 2 1 0000 5 5 5 5 1 5 6666666 444444 2 66 777 66 11111 4 66 6 777 4 66 1 1 1 22 0 5 11111 22222 66 7777 0 00000000 5 66 3 2222222222222222 44 7 2 11 1 8 0
lowQualScore : . . ... . . ... . . .. ... . . ........ ... ... . . . ... .. . .. ... . . . . . . .. . . . . . . . . . . . . . . . . .... .. .... .. .. . .. . .. . .. . ...... . . .... . .. .. . . . . . . . . .. . .. . .. . . . . . . . ... . . . .. . . . . ..... . .. .. ... . .. . . . . .... . . . .. .. . . . . . . . . ... . . . .. . ... . . . ... .... . . . ... . . .... ... .. . ........ .. ............................... ... . .... . . ... ........ ... ..... ... . . .. . . . . ... . . . . ... .. .. . . . . .. .. . . ... . . .. ... . . . .. . . . .... . . . . . . ....... ...... . .. ... .. ..... . .. . ... . .. . . . .. . . ..... ..... .. .... . ........ . .. . ................ .. . . .. . . .
lowQualScore : 0 0 000 0 2 000 8 0 99 666 0 0 99999999 555 999 7 0 0 444 99 6 44 000 7 7 7 7 0 7 44 4 0 0 5 2 2 2 0 0 4 7 0 0 0 0 0 5555 55 7777 55 00 0 00 4 55 0 55 0 888888 7 4 5555 0 55 55 7 4 1 1 4 4 0 1 88 6 00 1 66 3 0 3 3 3 3 8 888 4 0 3 66 0 6 3 6 33333 4 11 33 000 1 00 1 7 0 4 9999 7 9 2 77 55 3 0 0 0 0 0 0 0 000 4 4 1 11 0 222 0 0 0 222 2222 0 3 4 888 4 4 4444 888 33 7 22222222 11 2222222222222222222222222222222 999 4 9999 9 4 888 55555555 222 55555 000 5 7 55 3 4 9 4 888 1 4 4 7 333 11 99 0 0 0 0 00 99 2 4 000 0 0 99 888 0 2 4 99 0 2 0 6666 0 0 0 0 0 0 2222222 444444 2 11 888 11 11111 4 11 4 888 4 11 0 1 4 22 2 0 22222 55555 99 5555 2 55555555 0 99 1 1111111111111111 99 5 5 66 0 0 2
consensus : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAA-------------------CG--G--G---CGAATGG-GTCGT-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTAT------T-T--TTA-CAAGTACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
Reference ( family-4307 ) : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAA-------------------CG--G--G---CGAATGG-GTCGT-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTAT------T-T--TNA-CAAGTACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
gi|1 : GCTTTAA-ATG--AT-CCATGTTT---CTTGTAGA-TTTC--CTC--TAAATTCCTT-A-TATTTT----T--ATTGC-AGGACTCCAACACGTTA--TA-CGAAAGCATACTGGATTATCTCCATTTCGACAAGCAC--CTGAAGACGCACCTAGACAG---AAAACGCTGCTTTGCTCTGGGTTTTAGG-TC-GAAT-GGTTCATTAT-TC-GAGGACATGCTTTCAGAA-TTAGAGAA-GTGCATAGCTTCAATTGCTGAAGACGAGAGGTGGAAGGATACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAGTC-GT-ACTCG-G-G----GAA--CTCAGAGG----AAA--GAAAATGAG-A--ATGATATCA--GTTT-CAG--AA-CT-TTCAAAGAATTGTT----T-TGGTGACAACA-AAGAGAAATA--CTCAC-AAATGAAGGATA-T-CCTAAAGTTCTTCCATGATATAGGTGATCTACTA-TACTTTGACGAGAA-TT--CTCTTGATGAA--ACTGTCA-TCATTGACATCCCG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCA--AAACCATATCATGGATTTTCTTGTTAAC-AACCCC-GATTGGC----TTTCCTTTT-ACAAT--AGTGGCCATAT-CCTAGACAG--GCTTTTGACCATCATTTGGAATATACAGAACTTTGACTTTGGTTACTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-ACAA-TA-T-ATGGAACG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACACACT--TTACATCCCGT-GTATGAACAAA-AGG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTC-TCCAA-TCTATTCAAAGAAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---TCG-TCTTATTGTTG--CT---TGTTTGAC--GAAAACCAA-------------------TG--G--T---C-AATGG-ATCGT-TAT--GAAA-GACA-ATGGAC---TTTG--------CCTC--TA----CA---AAAATGTCGCTTGTTTT--GTCTTCAA-GGA-ACATTCCGTA---GCGTT-AGC-GGTGGATAGATATTCAATTCAAC-TTCAGGTT--TTTCA--GCC-CAGCC-AA-GTATCAAT--CGCG-AAGGATGTCACA-CTAGAA-ATT--CGTGACA---ACATTGAAC-GATTACTGAATGGTCTCAC--AAGTAATT-TTCATAAGAAAGTTATA----TA-CACTGTAGGATATCAA-TGTTCAAT-GCAAGAAGTGTTTC-GAGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----GG-G--AATAATGACTTGTC---CAG-AACA--TGGAATGATTAACCATCATCCCTTGAGTGAATCTGCTCTCTTAGGTTATTGGAA-ACAGG-----TA-----ACTTC--ATC-TATACG-------TGTT-TT--ATAATTTATCCTTTAT-T--TCA-AGAGTAAATTATGCACAATGGCCATATAAACATTTC-ATTCACATTGTTTCAGTTT
gi|10 : ttTTTCATTTTTAATTGCCATAACTTT-TTTTCCATACTTATCCCGCTCTTAT-GTTGGCCTCTGTGCTAGACCGGAAAA--AATACATTTATATATTGGTGCCGT-G--GAGCCGAATCG-TGCCT-T-T--GGAATGACATATGGACGCCTTTGCTCTGGCATTTC--TTAGCACAGAGAAACCTTCGCTTGTTTTCCGTCTATAATATGTACATGTTGTATGAGCACTTGGCATGTGAATAGATATTCAATTCAGCT--CAGGTTCTTTTCAAAGCCTCAG-CCAACGGAT-AAT--CGTGAAAG-ATGTCACA-CTAGAACATC--CGTGATAGATATATTGAAATGATTGCTGAATGG-CTCA----AGTAATTGTTCACAAGAAA-TAATGGGTGTAACAATGTAAGGTATCAACTGTT-AAA-GCAG-AGGTGTTTCCGAGAGCACGCATGACTCCCGCTTGTTCTAAAGTTAGGGAAGAGAACTAGAAAATTTCTATGGAGGAACTGTGAGAG--AGACAT-ATCTGTCTGTCAGCAACGGGTGGAATGTTC-ATTATCataatgataatatttcttttattcaggatgtcctagtcgaagtaagaggtaagtctcttcatttacgatattgattaactgagcacagtgattacaaataattcat
gi|11 : cCTAACATTGTTCAATGACATTGGCGTTATTCT----CTTCCAC---AC-TT--C-CT--CTGAT--TCCATTA-TTCTTGATGTTCAG-TGGT-TT-GT-GAATGCCTTCAAA---CACATTATAACAG-ATGA--AGAGCATG
gi|12 : aactgcaCCTA-CAGACTGGGCATTGT-CTGAAATA-AT-TCTCA-G-A----GAA--CACAAAAGTC--AAG--GAGAA--AG-A--ATGATATCG--GTTA-CAG--AA-TT-TGAAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CACAC-AAATGAGGGATA-T-CCTAAAGTTCTACCATGATATTGGCGTACTACTA-TACTTTGACGAGAG-TT--CTCTAGCCGAA--ACAGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGGGATATTGTTGATAGC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGTGGTCACAT-CCTAGACAG--ACTTTTGACCACTATTTGGAATAGTCGGAACTTTGAAATTAGTCACTGGGAAAGCAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-CA-T-ATGCAGCG-AC---TTGcaatgagtgatatagaggacaaacatttcaatgaatggatgaagttcaccgagaatggaattttgccaaagaacctagtgaaagcaatctggaaaggaccagagttattcactgagcacacagaagatctaatcattcacatgatcagacttgggatgattgctgaaatggaagagggagaaacattttatgtcccttgcatgaacaaacaaaagtatgacaaggctgtcttaaacaactgtacttgttcttccactgtttgcttcatgtttgaatatctgccattggtgattttccaccgcttagttgctacctgcatgacaaag
gi|13 : taT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----ACA--GAAAATGAG-A--ATGACATCG--GTTG-CAA--AAATT-TCAA-AGAAGTGTT----T-TGGTGAAAACA-AAGATAAGTA--TTCAC-AAATAAAGGATA-T-CCTAAAGTTATACCATGACATAGGCTTGATACTA-CACTTTGACGAGAG-TT--CTCTTGCCGAT--TCTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACTG-ATCC--AAACCACGTCAGGGATATTGTTGATAAC-AATCGT-GATTGGT----TTTCCTTTT-ACAAA--AATGGTCATAT-CCGCGACAG--GCTTTTGAAAACAATTTGGAACAGACAGCACTTTACAAT
gi|14 : TTCATTTTC---TGCCATA-CTTC-ATTT----TTTT---TCG-GCTGCTCGTGG-CCT----GTTTGAC--GAAGACCAA-------------------CA--GTGG---AGAATGG-GCCAT-TCT--GGAA-GACA-AAGGGC---TTCG--------TTTG--TT----CA---AAAACGTGGCGTGTTTT--CTCTAaaa
gi|15 : GAGAA--AGAAA---TTTATGG--AAA-----AC-G--AGAAATTTCTTGTC---CAG-AACA--TGGAATGTTCAATTATCATATTCTGACTGAGTCCGCTCTTATAGGCTACTGGAA-ACAGG-----TA-----TATTC--ATC-CTTAGG-------TGTT-TG--A-AATTTcnggtcattata
gi|16 : --ACTG--G-TTACTGATGTC-AA-TGGT-TT-GTCTGATTCTTTCAAGTTTATCAT-GTCAGGG-A-CA--AAATCATGTCCGAGATGTTGGCGGAAACTGACAAG-GATTGGCAAA-TTTCc
gi|17 : cagaatcTTG--------TCTC--TA----CA---AAAATGTTGCTTGTTTT--GTATATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGCATAGATATTCAATTCAGA-TTCAGGTT--TTCCaaaccgatgcaggatatc
gi|18 : AAAG-CAAAA--CA--GCAGCGTTGTTTGCAAATAAT-ATGGC-CG-GCCCTTTGGCTTCA-T-CGCAGTTGGTACAGACACACA--TTACA
gi|19 : GTTTAAA-ATT--AT-ACATGTTT---CTTGTACA-TTTC--CTA--TAAACGACTG-A-TATTTA----T--ATTGC-AGGACTCCAACATGTT
gi|2 : atTGCTT---TTTGTA-AATTTC--ATA--CAAATTTCTG-A-TATTTA----C--ATTGT-AGGATTCTAACATGTTG--TA-CAACAGCATACTGGATTATCTAAAAGATGATAAGCAC--CTGAAGCCGCACCTAAGTAG---AAAACGATGCTTCGTTCTGGGTTTTAAG-TC-AGAT-GGTTCATTTT-TC-CAGGACGCACTTTCTGAA-CTAGAGAA-GTGCATAGTTTCATTTGCTAAAGAAGAGAGGTGGAAAGAGACAA-TTCCTA-CAGACTGGGCAGTGT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----AAA--GAAAA--AG-AGAATGATGTCG--GTTG-CAC--AA-TTATCG-CAGAAATGTT----T-TGGTACAATCC-AGGAGAAATA--CGCAC-AAATGAAAGATA-T-CATAAAGCTCTACCATGATATAGGCGTTATACTA-CACTTTGAGGAGAG-TT--CTCTTGCCGAA--ACTGTCA-TCATTGACATCAAG-TGGT-TT-GT-TGATTGCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATTATTGATAAC-AACCGT-GATTGGC----TTTCCTTTT-ACAGA--AGCGGTCATAT-CCTAGACAG--ACTTTTGACCACTATTTGGGATAGTCAGCTCTTTGAAGT
gi|2 : AGAAAT-CAGAG--CAAAACAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTCA-T-CGCAGTTGGTACAGACACGCA--TTACATCCCCT-GTATGAACAAG-TTG-ACCTTT-GGTAGCAAGG-AAGAGAGC-T-TT-GTTCG-CTCTATCAAAAGTAAAACATCGGTATTGGTCTTTCGATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT----GTATGAC--GAAAACCAAT------------------CG---------TGAATGG-ATCGT-T-T--TGAACAACA-ATGGAC---TTTG--------TCTC--TT----CA---AAAATGTCGCTTGTTTT--GTCTATAA-GCG-ACATGTTGTA---GCGTT-GGC-TGTGAATAAATATTCAATTCAGATT-CAGGTT--TTTCA--GCC-CAGCC-AA-ACGCCAAT--CGC-AAAAGATGTCACA-CTAGAG-ATC--CGTGACA---ATATTGAAA-AATTGCTGAATGATCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CACTGTGGGGTATCAA-TGTTCAAA-GCAGGAAGTGTTCA-GAGAACATG-ATGACT-------GTT------TTATCAAAGAGAC--TGAAA---TTTATAG--GAA-----AG-G--GGAAATTACTTGTC---CAG-AACA--TGGGATGTTCAATCATCACACTCTGAGTGAATCCGCTCTTTTAGGCTATTGGAA-ACAGG-----TA-----TCTTA--ATC-CGGAAG-------TGTT-TA--ATAGTTGAT-----------------AATTTATTATTTCAAATGACAATGTATAC-ATACAATGCACACCGTTATAGTTTggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattagaaatcagagcaaaacaaatttgttgcaatatatgcagcggcttggtctcatcgcagttggtacagacacgcattacatcccctgtatgaacaagttgacctttggtagcaaggaagagagctttgttcgctctatcaaaagtaaaacatcggtattggtctttcgatttcattttctgccatatttcttttatttccgtcttattgttgcctgtatgacgaaaaccaatcgtgaatggatcgttttgaacaacaatggactttgtctcttcaaaaatgtcgcttgttttgtctataagcgacatgttgtagcgttggctgtgaataaatattcaattcagattcaggtttttcagcccagccaaacgccaatcgcaaaagatgtcacactagagatccgtgacaatattgaaaaattgctgaatgatctcacaagtaactttcacaagaaagtgatgtacactgtggggtatcaatgttcaaagcaggaagtgttcagagaacatgatgactgttttatcaaagagactgaaatttataggaaaggggaaattacttgtccagaacatgggatgttcaatcatcacactctgagtgaatccgctcttttaggctattggaaacaggtatcttaatccggaagtgtttaatagttgataatttattatttcaaatgacaatgtatacatacaatgcacaccgttatagttttattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|3 : tgctttttgtaaatttcatacaaatttctgatatttacattgtaggattctaacatgttgtacaacagcatactggattatctaaaagatgataagcacctgaagccgcacctaagtagaaaacgatgcttcgttctgggttttaagtcagatggttcatttttccaggacgcactttctgaactagagaagtgcatagtttcatttgctaaagaagagaggtggaaagagacaattcctacagactgggcagtgtctgaagtcgtactcagggaactcagaggaaagaaaaagagaatgatgtcggttgcacaattatcgcagaaatgttttggtacaatccaggagaaatacgcacaaatgaaagatatcataaagctctaccatgatataggcgttatactacactttgaggagagttctcttgccgaaactgtcatcattgacatcaagtggtttgttgattgctttaagaacataataactgatccaaaccatgtcagagatattattgataacaaccgtgattggctttccttttacagaagcggtcatatcctagacagacttttgaccactatttgggatagtcagctctttgaagtggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattTTGTA--ATTTT--CTAAATAAAATTTCG-A-TGCTT---------TT-T-AGGATCGTGATACGCTG--TA-CTACAACATACTGGATTGCATTCAGGACGACAAACAT--CTGAAGCAACACTTAGCAAG---AGAGCGATGCTTTGTTCTTGGTTTTAAA-TC-TGAT-GATTCATCAT-TC-GAGGACACGCTTTTTGAA-TTAGAGAA-GTGCATAGTTTCGATTGCTATGCAAGACAGATGGAAGGAATCCA-TTCCTA-CGGACTGGGCACTGA-CTGAGGTC-GT-ACTCA-G-A----AAA--CTCAGAGAAC--AAA--AAAAG--AG-A--ATGATATCA--GTTA-CAG--AA-TTATCGAG-GAAATGTT----T-TGATAAAAACA-AAGAAAAATA--TACAC-AGATCAACGACA-T-TCTAAAATTTTACCATGATATAGGCGCTATCCTA-CACTTTGACGAGAG-TT--CTCTTGCCGAC--ATTGTCA-TCGTTGACATCCAG-TGGT-TT-GT-TGATTGCTTCAAG---AACATAATAACCG-ATCC--AAACCATGCCAGGGAGCTTGTCCACAAC-AAAGGC-GAATGGT----TAGCGTTTA-ACGAA--AACGGTCATAT-ACAAGACAG--TCTCTTGACCAATATTTGGAGCAGTCGACAGTTTGAAATTAATT-CCG---ATGACA---AAAA--C------AATCTGTT-AAAA-TA-C-ATGGAACG-TC---TTGGTCTTA-TCTATA-TTGGCAGAGAGGCACA--TTTTATCCCTT-GCATGAACAAG-CGG-ACCTTC-ACGACCGAAC-AAAAGAACAA-ATTG-CAAACTT--TCCCAAGTCAAACGTCTGTCCTGGTCTTCCGGTTTCCATTTC---TGCCATA-TTTC-ATTT----ATTT---CCG-TCTGATTGTTG--CT---TGTCTGAC--AAAGACCAA-------------------TG--G--A----GAATGGAG--AT-T-TCCAAAA-GACA-AAGAA-----TTG--------TCTTTATA----CA---AAAACCTAGCGTGCTTT--CTCTGTAA-GAG-CCACACTGTA---GTCCT-TGC-TGTCAATAAATATTCAGTTCAGC-TTCAGGTT--TTTCA--CCC-CAG-C-AATGTTTCAAT--C-CCACAAACTGTTACA-TTGGAA-ATC--CGTGCTG---ATATTGAAA-AGTTACTGAGGGGTCTCAC--CAGTAACT-TTCACAAAGAAATCATG----TA-CACTGTAGGATATCAA-TGCTCACA-GCAGGATGTGTTTC-GTGAACATG-ATGATT-------GTT------TCGTGGAAGAAAA--AGATA---TTCAGGG--GAA-----AG-GCAAGCAG--ACTTGCC---CAA-TCCA--CGAGATGGCTAATTTCCATACCCTGAATGAATCAGATCTCCTTCATCATTGGAA-TAAGG-----TATATTGTTTTT--A---GATAGA-------TGTTATCCGATACATCA-------T-T--TAA-GAA--ACATTA-CTCTTAT--CAAGTTATAC---CT-ATACACATtattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|4 : atttttgatATTCT--CTC--TAAGTTT-TGCA-TATTT-----TCGATTTT-AGAATGCCAACACGCTC--TA-CTACAGTATACTGGATTACATACAGGATGACAAAGAG--CTGAGGTCACACTTATCCAG---GGAACACTGCTTCGTTATAGGATTTAAG-TC-GGAT-GGTACAGCAT-TC-CAAGACACGCTGTCTGAA-TTAGAGAA-GTGTATTGTATCTATTGCTAGACAAGACAGATGGAAAGAATCCA-TTCCTA-TTGATTGGGCACTGG-CTGAAAGC-GT-ACTCA-G-A----GAT--CTTAGAGG----AAA--GAAAA--AG-AGAATGGCGTCG--GTTG-AAG--AC-TTATC-ATGGCAATGTT----T-TGGTCAAATCA-AAGAAAAATG--CTCAC-AAATCAGCGATA-T-CCTGAAGTTTTACCATGAAATAGGCATTATCCTA-CACTTTCCTGAGAG-TT--CGCTTGCCCAA--ACTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TAATGCCTTCAAG---AACATAATAACGG-ATCC--AAACCACGTCAGAGAATTTGTTATCAAC-CACCGC-GAATGGT----TGGATTTTA-ACAAA--AACGGCCATAT-TCAAGACAG--TCTTTTGACAAAGATTTGGAGTACTGGGGACTTTGAAA----TCGATAGGGAGG---------A--CAAAAGAGACTTGCT-ACAA-TA-C-ATGGAACG-CC---TTGGTCTCA-T-TTTTGTTGGAAAGAAGGCACA--TTACATTCCGT-GTATGAACAAA-CAG-ACATTT-GCTGTTGAAC-AACAGAAA-GATTTG--CAATCATTTCC-AAGTCAAACATCAGTATTGGTCTTCCGATTTCCTTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTGATTGTTG-CA----TGTTTGAC--ACAAACTGG-------------------TG--G--A----AACTGG-GTCATCC-T--GGAA-GACG-ATGGAC---TTTG--------TTTG--TT----TA---AAGACTTGGCTTGCTTT--GTCTTTAA-AAA-TCATACAGTA---GCTTT-GTC-TGTGAACAAATATTCAATTCAGC-TTCAGGTT--TTTCA--TTC-CAG-CAAA-GGTTCAATTCCACAAA---TTGTTACA-TTGGAA-ATC--CGTGATG---ATATCGAAC-GATTACTGAAGGGTCTCAC--CAGTAATT-TTCACAAAAAAATCATG----TA-CACTGTTGGATACCAA-TGCTCAAA-ACAGGAAGTGTTCA-TTGAACACG-ATGACT-------GCT------TTGTTGAAAAGAA--AGAAA---TCCACGG--GAA-----AG-G--AAGAATCACTTGCC---CAA-GACA--TGGAATGCGCAATCGCCACATCCTGGATGAATCAACTATCCTATTTCATTGG-A-ATAGGGTATTTA-----TTTTC--A---AATACG-------AATT-TC--CTATGTTAT------TAT--CTA-TATCAACATCATTTtagtctaatcaattacaatttccatgtttcttttaacaggatgttctaggaaaaccaacaagtgagtaactataggaattgtatgaaataatatattatattagtttcaaaagtgtaattgcagttta
gi|5 : tgtttgcaaatgccttacctttatctttgCTCCTC-A-TATTT-----T--GTTTT-AGAGCTCCCACAAGCTC--TA-CGAGAACATACTGGATTACCTAAAGCACGACCAGCAT--CTCAAGAAACATTTGGCCAG---GGAACGATGTTTCGTTGTAGGGTTTAAG-TC-GGAT-GGTTCATCAT-TCGCAG-ATGCACTCTCTGGC-CTTGAGGA-ACGCATCGTTTCGATTGCAAACCAACCTAGATGGACGGAATCCA-TTCCAG-GGGATTGGGTAACTT-TTGAAGTG-GT-ACTTA-G-A----CAA--CTCA-AGG-A--AGATGGAAAG--AA-A--AT--TGTCCCTGTTA-AAA--CA-TTGTC-ACAGCTATGTT----T-TGGTGACAACA-AAGAAAAATC--CAAAC-AAATCAGCGATG-T-CCTGAGATTTTACCATGATATAGGCGTTATACTT-CACTTTGACGCAGG-TT--TTCTATCCGAA--AATGTCA-TTCTTGACATCCAA-TGGT-TT-GT-TGATTCTTTTAAG---AATATTATCACCG-ATCC--AAACCATTTTGTGGAGCTGGTTGAGAAC-AACGAT-GATTGGC----GTGCTTTTA-ACGAC--AACGGGCACATATCT-GACGA--TCTTTTGACGAAGATTTGGACAAGTCAGGAATTTAGAATCA--------------AAC-CAGATGTCAAAGTAAGCTTGTT-GCAA-TA-C-ATGGAACG-TC---TTGGTCTCA-T-TTACGCCGGTCGAGAGGCGCA--TTATATTCCGT-GCATGAACAAG-TTG-ACCTTT-GGTAGCAATG-AAGAGGAA-TATCTGC---GTTCCATTCAAAATAAAACATCAGTTTTGGTCTTCCGATTTCAATTTC---TGCCATA-CTTC-ATTT----TTTT---CCG-GCTGATCGTTG-CCT----GTTTGAC--GAATACCAA-------------------CAATG--G---AGAATGG-GACAT-TCT--GGAA-GACA-AAGGAC---TTCG--------TTTG--TT----CA---AAAACGTCGCGTGTTTT--CTCTTTAG-ATG-TCATACAGTA---ATTCT-GGC-TGTACACAAACATTCAATTCAGCTT-CAGATC--TTCCA--GCC-TAG-C-AATGACTCAAT--CAAGAA-GGATGTTACT-CTGAAA-GTT--CGTGACG---ATGTTGAAA-GATTACTGAAAGAACTGACTGAA--AACT-TTCACAAGAAAATCGTG----TA-TACTGCAGGATATCAA-TGTTCAAATACAGCAG--GTTTC-ATAGATATG-ATGACT-------G-C------TTGTCTGAGAAGA--AAAAA---TTCGT-G--GAA-----AG-G--AAAACTCCCATGTC---CGA-AACA--TGGAATGCTAAATCATCACGAACTGAAGGAGTCAACTCTTCTATATCATTGGAATGC-GGTAT--TA-----TTTTCTTATCAAACAAA-------AAAT-CC--AT-ATTTAT------T-TTGTTATCAAGAACAAACTTTC--ATTACAATtttctcattttcgtatataggtataaagaattgtatacatcattttcagttaataatgatgataattttcttttaactaggatgtcctggccgtaccaaccggtgagtaag
gi|6 : ATAGCTTGAG-ATA--AT-CTGTGTTT---C--GTAGAATTTC--CTC--TCAACTTCTG-A-TATTTA----C--ATTAC-AGGACTCCAACACGTTA--TA-CAACAGCATACTGGATTATCTCCAATTCGACAGACAC--CTGAAAACGCACCTAGATAG---AAAACGCTGCTTTGTTCTAGGTTTTAGG-TC-AGAT-GGTTCCTTTT-TT-CAGGACACGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCAGTTGCTAAAGAAGATAGGTGGAAGGAAACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAATT-GT-ACTCA-G-A----GAA--CTCAAAGGTC--AAG--GAGAA--AG-A--ATGGTGTCG--GTTA-CAG--AA-TT-TAGAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCACGATATAGGCGTGCTACTA-CACTTTGATGAAAG-TT--CTCTAGCTGAA--ACTGTCA-TCATTAACATCCAA-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATCGTTGATAAC-AACCGC-GACTGGG----TTTCCTTTT-ACAAA--AGTGGTCACAT-CCTAGACAG--GCTTTTGACGACTATTTGGAGTATTCGGAACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTTA-T-TGCAGTTGGTACATACGCACA--TTACATTCCGT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AAGAGAAC-T-TTTGTTCAACTCCATCCAAAATAAAACATCGGTATTGGTCTTTCGATTTCAATTTC---TGCCATA-CTTCTTTTT----ATTT---CCG-ACTTATTGGTG-CTT---TGTTTGAC--AAAAACCAA-------------------TG--G--G---CGAATGG-ATCGT-T-T--GGAG-GACA-ATGGAC---TTTG--------TCTC--TA----CA---AAA--TTTGCTTG-TTT--GTCTATAA-GCG-ACACGCTGT----GCGCG-GGC-TGTGAATAGATATTCAATTCAGA--TCAGG-T--TTTCA--GCC-CAG-C-AG-GTTTTAATA-TGCAAAAGGATGTGACAGCTAGAA-ATCAGCGTGACA---ATATTGAGA-GATTACTGAATGGTCTAAC--AAAAAACT-TTCACAAGAAAGTGATG----TA-CAATGTCGGATATCAA-TGCTCAAG-GCAGGAAGTGTTTC-GCGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----AG-G--AAAAATTACTTGTC---CAA-AACA--TGGAATGATTAATCATCATATCCTGAGTGAATCCGCTCTTTTGGTCTATTGGAA-ACAGG-----TA-----TCTTT--ATC-AATAGG-------CGTT-CC--ATCATTTCT------T-T--TCA-CAAGTACATTATTTCTAATGACAATGTATACAATGC-ATGCATATAATTTTAGTTTccattatttagaacgatgaatgatattttgccgctactaatgtgaatgttctttttttaattaggatgttcgagtggaaccaacgggtgagtaaat
gi|7 : GAACGGAACGCAAAA--TGAATCG--CTTGCT-ACAA-TA-T-ATGCAACG-GC---TTGGTCTCA-T-TGCAGTTGGTAAAAACAAACA--TTACATCCCCT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AACAGATC-T-TTT-TTCAATCTTA-CCAAAGTAAAACATCGGTATTGGTCTTTCAATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-CCTTATTGTTG-C-T---TGTTTGAC--GAAAACTAA--------------------A--A--G---CAAATGG-GCCGT-T-TT-GAAA-GACA-ATGGAC---TTTG--------TCTT--TA----CA---AAGACCTCGCTTGTTTT--GTTTATAA-GCG-ACATGTTGTA---GCGCT-GGC-TGTGCATAGATGTTCAATTCAGCTT-CAGGTC--TTTCA--GCC-CAGGC-AA-GGGTCAAT--CATGAAAG-ATGTCACA-TTAGAA-ATC--CGTGACG---ACATTGAAA-TGTTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CAATGTAGGATATCAA-TGCTCAAT-GCAGGAAGTGTTTC-GAGAACATG-ATGCCT-------ATT------TTATCAAAGAGAA--AGGAA---TTTACGG--GAA-----AG-G--AGAAATCACCTGTC---CAG-AACA--TGGAATGTTCAATCATCATATCCTGAGCGAATCCGCTCTGTTAGGCTATTGGAA-ACAGG-----TA-----TCGTC--ATT-CTTTGGTTTTTGACAGT-TC--ATCATTTAT------T-T--TT--CAGGTACTTTATTTCAAATGACAATGTATGCAATCC-ATGCAAATCATCTTAGTTT
gi|8 : ccttgggtgataATGGCTTTGAGATGGAATACTTTGTTTGCGCTTA-GGAATTTCACCTC--TCAACTTCTG-AGTATTTAATTTT--ACTACCAGGACTCCAACACGTTAGTTAACAACAGCATACTGGATTATCTCCAATTCGACAGGCACACCTGAAAACGCACCTAGATAAGAAAGAACGCTGCTTTGTTCTAGGTTTTAGGGTCAGGATTGGTTCCTTTTCTC-GAGGACACGCTTTCTGAAACTAGAGAAAGTGCA-AGTTTCAGTTGCTAAAGAAGATAG-TGGAAGGAAACCAGTTCCTATCAGACTGGGCATTGTGCTGAAATT-GTCACTCA-GCA----GAAACTTCAAAGG-TCTAAG--GAGAA--AGGA--ATGTGGTCG---TTA-CAGG-AA-TT-TAGAGAG---TGTG----TGTGGGGCAAACGGAAGAGAAATATACGCACCAAATGAAGGATAATACCTAAAGTTCTACCACGATATAGGCGTGCTACTACCACTTTGATGAAAGTTT--CTCTAGCTGAA--ACTGTCATTCATTAACATCCAACTGGTGTTGGT-TGATTCCTT-AAG---AACATAATAACTGCATCCAAAAACCATGTCA-AGATATCGTTGATAAC-AACCGCAGACGGG------TTCCTTTTGACAAAATATCGGTCACAT--CTAGACAGGCGCTTTTGACCACTATTTGGGGTATTC-GAACTTTGAAATCAG-CGCTGGGAAAGACAT-C-AAA--CAAAGCAAA--TGTT-GCAAGTA-TAATGCAGCGAGC---TTGGTCGTATT-TGCAGTTGGTACATACGCACACCTTACATTCCGTAGTATGAACAAGACTGCACCTTGAGGT-TCAAGGAAAGAGAAC-T-TT--TCCAAacaatgttttccttttttctacaggatgtcaaagtaacaggtatgaatctttatttaagatcccgattaaatgaacattgtttcaaaaaaatacattt
gi|9 : cTCCGAC-CTAGAAAA-CTGTATTGTTTCTATCGCGAAAGAAGACAAATGGAAAGAATCTA-TTCCCA-AGGCATGGTCATT-T-ATGGAATTGGT-GTTCATG-AATTTGAA--AAAAGGGG-TTAAAA--GTGAA--AG-A--AT--TTTTG--ACCAGCAGGTAA-TT-TC--AAGAATTATTTCTAT-CAGCGAGCTCG-AAGAGAGATA--tcca
gi|9 : ggataaggacgagttttatgataaccttttggatttgctaccaaaagatgatgcagagcttaaaaagcacttttgtaggagtagatgtttctttgtcggcttaccttgtgatgaaaacagtttcttagatcctttgATGACATCGGTATGATTCTT-TACTTCAATGAAAA-TGGACTCT--CAGAATCACTG--G-TTACTGATGTCCAA-TGGT-TT-GT-TGATTCTTTCAAA---TTTATCATATCAG-ACAG--AAAGCATGTCAGAGATTTAG-CGAAAACTGACCAG-GACTGGCAATATTTCCttggttggattttgaagtagttcgtgtggaggttcaagacgctctgcgttttttcaatgacatcggtatgattctttacttcaatgaaaatggactctcagaatcactggttactgatgtccaatggtttgttgattctttcaaatttatcatatcagacagaaagcatgtcagagatttagcgaaaactgaccaggactggcaatatttccaccaatcaggatatct
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGATAAGGACGAATTTTATGATAACCTTTTGGATTTGCTACC
Alignments
lowQualScore : 1 111 1 111 1 22222222 111 3333 11 11 222222 11111 111 2222 11111111 6666666666666666666666666666666 1111 11111111 222 1 1 1 11 1111 1111111 111111 11111 22222 11111 22222222 4444444444444444 11
lowQualScore : 1 0 444 0 4 444 0 5 77 888 5 5 77777777 999 888 5 4 1 222 77 1 11 000 0 5 5 5 1 5 66 1 5 5 0 4 2 4 1 5 4 1 4 4 4 4 4 8888 55 8888 55 11 4 11 1 55 4 99 4 000000 0 2 8888 4 44 55 3 4 0 0 4 4 1 0 33 3 55 8 44 3 2 3 3 3 3 0 555 1 1 3 44 1 0 7 3 55555 4 66 66 888 1 11 1 2 1 0 7777 0 0 2 77 55 2 4 8 4 4 1 3 4 777 4 4 1 66 5 666 5 5 5 222 1111 4 2 1 777 4 4 9999 777 55 1 77777777 66 6666666666666666666666666666666 777 4 4444 8 4 777 44444444 666 99999 777 2 0 55 0 4 1 4 777 0 4 4 0 777 66 66 5 5 0 5 22 11 2 3 888 5 5 66 888 5 0 0 66 5 2 1 0000 5 5 5 5 1 5 6666666 444444 2 66 777 66 11111 4 66 6 777 4 66 1 1 1 22 0 5 11111 22222 66 7777 0 00000000 5 66 3 1111111111111111 77 7 2 11 1 8 0
lowQualScore : . . ... . . ... . . .. ... . . ........ ... ... . . . ... .. . .. ... . . . . . . .. . . . . . . . . . . . . . . . . .... .. .... .. .. . .. . .. . .. . ...... . . .... . .. .. . . . . . . . . .. . .. . .. . . . . . . . ... . . . .. . . . . ..... . .. .. ... . .. . . . . .... . . . .. .. . . . . . . . . ... . . . .. . ... . . . ... .... . . . ... . . .... ... .. . ........ .. ............................... ... . .... . . ... ........ ... ..... ... . . .. . . . . ... . . . . ... .. .. . . . . .. .. . . ... . . .. ... . . . .. . . . .... . . . . . . ....... ...... . .. ... .. ..... . .. . ... . .. . . . .. . . ..... ..... .. .... . ........ . .. . ................ .. . . .. . . .
lowQualScore : 0 0 000 0 2 000 8 0 99 666 0 0 99999999 555 999 7 0 0 444 99 6 44 000 7 7 7 7 0 7 44 4 0 0 5 2 2 2 0 0 4 7 0 0 0 0 0 5555 55 7777 55 00 0 00 4 55 0 55 0 888888 7 4 5555 0 55 55 7 4 1 1 4 4 0 1 88 6 00 1 66 3 0 3 3 3 3 8 888 4 0 3 66 0 6 3 6 33333 4 11 33 000 1 00 1 7 0 4 9999 7 9 2 77 55 3 0 0 0 0 0 0 0 000 4 4 1 11 0 222 0 0 0 222 2222 0 3 4 888 4 4 4444 888 33 7 22222222 11 2222222222222222222222222222222 999 4 9999 9 4 888 55555555 222 55555 000 5 7 55 3 4 9 4 888 1 4 4 7 333 11 99 0 0 0 0 00 99 2 4 000 0 0 99 888 0 2 4 99 0 2 0 6666 0 0 0 0 0 0 2222222 444444 2 11 888 11 11111 4 11 4 888 4 11 0 1 4 22 2 0 22222 55555 99 5555 2 55555555 0 99 1 7777777777777777 99 5 5 66 0 0 2
consensus : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAA-------------------CG--G--G---CGAATGG-GTCGT-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTAT------T-T--TTA-CAAG-NACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
Reference ( family-4307 ) : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAA-------------------CG--G--G---CGAATGG-GTCGT-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTAT------T-T--TTA-CAAG-TACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
gi|1 : GCTTTAA-ATG--AT-CCATGTTT---CTTGTAGA-TTTC--CTC--TAAATTCCTT-A-TATTTT----T--ATTGC-AGGACTCCAACACGTTA--TA-CGAAAGCATACTGGATTATCTCCATTTCGACAAGCAC--CTGAAGACGCACCTAGACAG---AAAACGCTGCTTTGCTCTGGGTTTTAGG-TC-GAAT-GGTTCATTAT-TC-GAGGACATGCTTTCAGAA-TTAGAGAA-GTGCATAGCTTCAATTGCTGAAGACGAGAGGTGGAAGGATACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAGTC-GT-ACTCG-G-G----GAA--CTCAGAGG----AAA--GAAAATGAG-A--ATGATATCA--GTTT-CAG--AA-CT-TTCAAAGAATTGTT----T-TGGTGACAACA-AAGAGAAATA--CTCAC-AAATGAAGGATA-T-CCTAAAGTTCTTCCATGATATAGGTGATCTACTA-TACTTTGACGAGAA-TT--CTCTTGATGAA--ACTGTCA-TCATTGACATCCCG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCA--AAACCATATCATGGATTTTCTTGTTAAC-AACCCC-GATTGGC----TTTCCTTTT-ACAAT--AGTGGCCATAT-CCTAGACAG--GCTTTTGACCATCATTTGGAATATACAGAACTTTGACTTTGGTTACTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-ACAA-TA-T-ATGGAACG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACACACT--TTACATCCCGT-GTATGAACAAA-AGG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTC-TCCAA-TCTATTCAAAGAAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---TCG-TCTTATTGTTG--CT---TGTTTGAC--GAAAACCAA-------------------TG--G--T---C-AATGG-ATCGT-TAT--GAAA-GACA-ATGGAC---TTTG--------CCTC--TA----CA---AAAATGTCGCTTGTTTT--GTCTTCAA-GGA-ACATTCCGTA---GCGTT-AGC-GGTGGATAGATATTCAATTCAAC-TTCAGGTT--TTTCA--GCC-CAGCC-AA-GTATCAAT--CGCG-AAGGATGTCACA-CTAGAA-ATT--CGTGACA---ACATTGAAC-GATTACTGAATGGTCTCAC--AAGTAATT-TTCATAAGAAAGTTATA----TA-CACTGTAGGATATCAA-TGTTCAAT-GCAAGAAGTGTTTC-GAGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----GG-G--AATAATGACTTGTC---CAG-AACA--TGGAATGATTAACCATCATCCCTTGAGTGAATCTGCTCTCTTAGGTTATTGGAA-ACAGG-----TA-----ACTTC--ATC-TATACG-------TGTT-TT--ATAATTTATCCTTTAT-T--TCA-AGAG-TAAATTATGCACAATGGCCATATAAACATTTC-ATTCACATTGTTTCAGTTT
gi|10 : ttTTTCATTTTTAATTGCCATAACTTT-TTTTCCATACTTATCCCGCTCTTAT-GTTGGCCTCTGTGCTAGACCGGAAAA--AATACATTTATATATTGGTGCCGT-G--GAGCCGAATCG-TGCCT-T-T--GGAATGACATATGGACGCCTTTGCTCTGGCATTTC--TTAGCACAGAGAAACCTTCGCTTGTTTTCCGTCTATAATATGTACATGTTGTATGAGCACTTGGCATGTGAATAGATATTCAATTCAGCT--CAGGTTCTTTTCAAAGCCTCAG-CCAACGGAT-AAT--CGTGAAAG-ATGTCACA-CTAGAACATC--CGTGATAGATATATTGAAATGATTGCTGAATGG-CTCA----AGTAATTGTTCACAAGAAA-TAATGGGTGTAACAATGTAAGGTATCAACTGTT-AAA-GCAG-AGGTGTTTCCGAGAGCACGCATGACTCCCGCTTGTTCTAAAGTTAGGGAAGAGAACTAGAAAATTTCTATGGAGGAACTGTGAGAG--AGACAT-ATCTGTCTGTCAGCAACGGGTGGAATGTTC-ATTATCataatgataatatttcttttattcaggatgtcctagtcgaagtaagaggtaagtctcttcatttacgatattgattaactgagcacagtgattacaaataattcat
gi|11 : cCTAACATTGTTCAATGACATTGGCGTTATTCT----CTTCCAC---AC-TT--C-CT--CTGAT--TCCATTA-TTCTTGATGTTCAG-TGGT-TT-GT-GAATGCCTTCAAA---CACATTATAACAG-ATGA--AGAGCATG
gi|12 : aactgcaCCTA-CAGACTGGGCATTGT-CTGAAATA-AT-TCTCA-G-A----GAA--CACAAAAGTC--AAG--GAGAA--AG-A--ATGATATCG--GTTA-CAG--AA-TT-TGAAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CACAC-AAATGAGGGATA-T-CCTAAAGTTCTACCATGATATTGGCGTACTACTA-TACTTTGACGAGAG-TT--CTCTAGCCGAA--ACAGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGGGATATTGTTGATAGC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGTGGTCACAT-CCTAGACAG--ACTTTTGACCACTATTTGGAATAGTCGGAACTTTGAAATTAGTCACTGGGAAAGCAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-CA-T-ATGCAGCG-AC---TTGcaatgagtgatatagaggacaaacatttcaatgaatggatgaagttcaccgagaatggaattttgccaaagaacctagtgaaagcaatctggaaaggaccagagttattcactgagcacacagaagatctaatcattcacatgatcagacttgggatgattgctgaaatggaagagggagaaacattttatgtcccttgcatgaacaaacaaaagtatgacaaggctgtcttaaacaactgtacttgttcttccactgtttgcttcatgtttgaatatctgccattggtgattttccaccgcttagttgctacctgcatgacaaag
gi|13 : taT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----ACA--GAAAATGAG-A--ATGACATCG--GTTG-CAA--AAATT-TCAA-AGAAGTGTT----T-TGGTGAAAACA-AAGATAAGTA--TTCAC-AAATAAAGGATA-T-CCTAAAGTTATACCATGACATAGGCTTGATACTA-CACTTTGACGAGAG-TT--CTCTTGCCGAT--TCTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACTG-ATCC--AAACCACGTCAGGGATATTGTTGATAAC-AATCGT-GATTGGT----TTTCCTTTT-ACAAA--AATGGTCATAT-CCGCGACAG--GCTTTTGAAAACAATTTGGAACAGACAGCACTTTACAAT
gi|14 : TTCATTTTC---TGCCATA-CTTC-ATTT----TTTT---TCG-GCTGCTCGTGG-CCT----GTTTGAC--GAAGACCAA-------------------CA--GTGG---AGAATGG-GCCAT-TCT--GGAA-GACA-AAGGGC---TTCG--------TTTG--TT----CA---AAAACGTGGCGTGTTTT--CTCTAaaa
gi|15 : GAGAA--AGAAA---TTTATGG--AAA-----AC-G--AGAAATTTCTTGTC---CAG-AACA--TGGAATGTTCAATTATCATATTCTGACTGAGTCCGCTCTTATAGGCTACTGGAA-ACAGG-----TA-----TATTC--ATC-CTTAGG-------TGTT-TG--A-AATTTcnggtcattata
gi|16 : --ACTG--G-TTACTGATGTC-AA-TGGT-TT-GTCTGATTCTTTCAAGTTTATCAT-GTCAGGG-A-CA--AAATCATGTCCGAGATGTTGGCGGAAACTGACAAG-GATTGGCAAA-TTTCc
gi|17 : cagaatcTTG--------TCTC--TA----CA---AAAATGTTGCTTGTTTT--GTATATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGCATAGATATTCAATTCAGA-TTCAGGTT--TTCCaaaccgatgcaggatatc
gi|18 : AAAG-CAAAA--CA--GCAGCGTTGTTTGCAAATAAT-ATGGC-CG-GCCCTTTGGCTTCA-T-CGCAGTTGGTACAGACACACA--TTACA
gi|19 : GTTTAAA-ATT--AT-ACATGTTT---CTTGTACA-TTTC--CTA--TAAACGACTG-A-TATTTA----T--ATTGC-AGGACTCCAACATGTT
gi|2 : atTGCTT---TTTGTA-AATTTC--ATA--CAAATTTCTG-A-TATTTA----C--ATTGT-AGGATTCTAACATGTTG--TA-CAACAGCATACTGGATTATCTAAAAGATGATAAGCAC--CTGAAGCCGCACCTAAGTAG---AAAACGATGCTTCGTTCTGGGTTTTAAG-TC-AGAT-GGTTCATTTT-TC-CAGGACGCACTTTCTGAA-CTAGAGAA-GTGCATAGTTTCATTTGCTAAAGAAGAGAGGTGGAAAGAGACAA-TTCCTA-CAGACTGGGCAGTGT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----AAA--GAAAA--AG-AGAATGATGTCG--GTTG-CAC--AA-TTATCG-CAGAAATGTT----T-TGGTACAATCC-AGGAGAAATA--CGCAC-AAATGAAAGATA-T-CATAAAGCTCTACCATGATATAGGCGTTATACTA-CACTTTGAGGAGAG-TT--CTCTTGCCGAA--ACTGTCA-TCATTGACATCAAG-TGGT-TT-GT-TGATTGCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATTATTGATAAC-AACCGT-GATTGGC----TTTCCTTTT-ACAGA--AGCGGTCATAT-CCTAGACAG--ACTTTTGACCACTATTTGGGATAGTCAGCTCTTTGAAGT
gi|2 : AGAAAT-CAGAG--CAAAACAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTCA-T-CGCAGTTGGTACAGACACGCA--TTACATCCCCT-GTATGAACAAG-TTG-ACCTTT-GGTAGCAAGG-AAGAGAGC-T-TT-GTTCG-CTCTATCAAAAGTAAAACATCGGTATTGGTCTTTCGATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT----GTATGAC--GAAAACCAAT------------------CG---------TGAATGG-ATCGT-T-T--TGAACAACA-ATGGAC---TTTG--------TCTC--TT----CA---AAAATGTCGCTTGTTTT--GTCTATAA-GCG-ACATGTTGTA---GCGTT-GGC-TGTGAATAAATATTCAATTCAGATT-CAGGTT--TTTCA--GCC-CAGCC-AA-ACGCCAAT--CGC-AAAAGATGTCACA-CTAGAG-ATC--CGTGACA---ATATTGAAA-AATTGCTGAATGATCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CACTGTGGGGTATCAA-TGTTCAAA-GCAGGAAGTGTTCA-GAGAACATG-ATGACT-------GTT------TTATCAAAGAGAC--TGAAA---TTTATAG--GAA-----AG-G--GGAAATTACTTGTC---CAG-AACA--TGGGATGTTCAATCATCACACTCTGAGTGAATCCGCTCTTTTAGGCTATTGGAA-ACAGG-----TA-----TCTTA--ATC-CGGAAG-------TGTT-TA--ATAGTTGAT-----------------AA-TTTATTATTTCAAATGACAATGTATAC-ATACAATGCACACCGTTATAGTTTggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattagaaatcagagcaaaacaaatttgttgcaatatatgcagcggcttggtctcatcgcagttggtacagacacgcattacatcccctgtatgaacaagttgacctttggtagcaaggaagagagctttgttcgctctatcaaaagtaaaacatcggtattggtctttcgatttcattttctgccatatttcttttatttccgtcttattgttgcctgtatgacgaaaaccaatcgtgaatggatcgttttgaacaacaatggactttgtctcttcaaaaatgtcgcttgttttgtctataagcgacatgttgtagcgttggctgtgaataaatattcaattcagattcaggtttttcagcccagccaaacgccaatcgcaaaagatgtcacactagagatccgtgacaatattgaaaaattgctgaatgatctcacaagtaactttcacaagaaagtgatgtacactgtggggtatcaatgttcaaagcaggaagtgttcagagaacatgatgactgttttatcaaagagactgaaatttataggaaaggggaaattacttgtccagaacatgggatgttcaatcatcacactctgagtgaatccgctcttttaggctattggaaacaggtatcttaatccggaagtgtttaatagttgataatttattatttcaaatgacaatgtatacatacaatgcacaccgttatagttttattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|3 : tgctttttgtaaatttcatacaaatttctgatatttacattgtaggattctaacatgttgtacaacagcatactggattatctaaaagatgataagcacctgaagccgcacctaagtagaaaacgatgcttcgttctgggttttaagtcagatggttcatttttccaggacgcactttctgaactagagaagtgcatagtttcatttgctaaagaagagaggtggaaagagacaattcctacagactgggcagtgtctgaagtcgtactcagggaactcagaggaaagaaaaagagaatgatgtcggttgcacaattatcgcagaaatgttttggtacaatccaggagaaatacgcacaaatgaaagatatcataaagctctaccatgatataggcgttatactacactttgaggagagttctcttgccgaaactgtcatcattgacatcaagtggtttgttgattgctttaagaacataataactgatccaaaccatgtcagagatattattgataacaaccgtgattggctttccttttacagaagcggtcatatcctagacagacttttgaccactatttgggatagtcagctctttgaagtggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattTTGTA--ATTTT--CTAAATAAAATTTCG-A-TGCTT---------TT-T-AGGATCGTGATACGCTG--TA-CTACAACATACTGGATTGCATTCAGGACGACAAACAT--CTGAAGCAACACTTAGCAAG---AGAGCGATGCTTTGTTCTTGGTTTTAAA-TC-TGAT-GATTCATCAT-TC-GAGGACACGCTTTTTGAA-TTAGAGAA-GTGCATAGTTTCGATTGCTATGCAAGACAGATGGAAGGAATCCA-TTCCTA-CGGACTGGGCACTGA-CTGAGGTC-GT-ACTCA-G-A----AAA--CTCAGAGAAC--AAA--AAAAG--AG-A--ATGATATCA--GTTA-CAG--AA-TTATCGAG-GAAATGTT----T-TGATAAAAACA-AAGAAAAATA--TACAC-AGATCAACGACA-T-TCTAAAATTTTACCATGATATAGGCGCTATCCTA-CACTTTGACGAGAG-TT--CTCTTGCCGAC--ATTGTCA-TCGTTGACATCCAG-TGGT-TT-GT-TGATTGCTTCAAG---AACATAATAACCG-ATCC--AAACCATGCCAGGGAGCTTGTCCACAAC-AAAGGC-GAATGGT----TAGCGTTTA-ACGAA--AACGGTCATAT-ACAAGACAG--TCTCTTGACCAATATTTGGAGCAGTCGACAGTTTGAAATTAATT-CCG---ATGACA---AAAA--C------AATCTGTT-AAAA-TA-C-ATGGAACG-TC---TTGGTCTTA-TCTATA-TTGGCAGAGAGGCACA--TTTTATCCCTT-GCATGAACAAG-CGG-ACCTTC-ACGACCGAAC-AAAAGAACAA-ATTG-CAAACTT--TCCCAAGTCAAACGTCTGTCCTGGTCTTCCGGTTTCCATTTC---TGCCATA-TTTC-ATTT----ATTT---CCG-TCTGATTGTTG--CT---TGTCTGAC--AAAGACCAA-------------------TG--G--A----GAATGGAG--AT-T-TCCAAAA-GACA-AAGAA-----TTG--------TCTTTATA----CA---AAAACCTAGCGTGCTTT--CTCTGTAA-GAG-CCACACTGTA---GTCCT-TGC-TGTCAATAAATATTCAGTTCAGC-TTCAGGTT--TTTCA--CCC-CAG-C-AATGTTTCAAT--C-CCACAAACTGTTACA-TTGGAA-ATC--CGTGCTG---ATATTGAAA-AGTTACTGAGGGGTCTCAC--CAGTAACT-TTCACAAAGAAATCATG----TA-CACTGTAGGATATCAA-TGCTCACA-GCAGGATGTGTTTC-GTGAACATG-ATGATT-------GTT------TCGTGGAAGAAAA--AGATA---TTCAGGG--GAA-----AG-GCAAGCAG--ACTTGCC---CAA-TCCA--CGAGATGGCTAATTTCCATACCCTGAATGAATCAGATCTCCTTCATCATTGGAA-TAAGG-----TATATTGTTTTT--A---GATAGA-------TGTTATCCGATACATCAT------T-T-------AAGAAACATTA-CTCTTAT--CAAGTTATAC---CT-ATACACATtattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|4 : atttttgatATTCT--CTC--TAAGTTT-TGCA-TATTT-----TCGATTTT-AGAATGCCAACACGCTC--TA-CTACAGTATACTGGATTACATACAGGATGACAAAGAG--CTGAGGTCACACTTATCCAG---GGAACACTGCTTCGTTATAGGATTTAAG-TC-GGAT-GGTACAGCAT-TC-CAAGACACGCTGTCTGAA-TTAGAGAA-GTGTATTGTATCTATTGCTAGACAAGACAGATGGAAAGAATCCA-TTCCTA-TTGATTGGGCACTGG-CTGAAAGC-GT-ACTCA-G-A----GAT--CTTAGAGG----AAA--GAAAA--AG-AGAATGGCGTCG--GTTG-AAG--AC-TTATC-ATGGCAATGTT----T-TGGTCAAATCA-AAGAAAAATG--CTCAC-AAATCAGCGATA-T-CCTGAAGTTTTACCATGAAATAGGCATTATCCTA-CACTTTCCTGAGAG-TT--CGCTTGCCCAA--ACTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TAATGCCTTCAAG---AACATAATAACGG-ATCC--AAACCACGTCAGAGAATTTGTTATCAAC-CACCGC-GAATGGT----TGGATTTTA-ACAAA--AACGGCCATAT-TCAAGACAG--TCTTTTGACAAAGATTTGGAGTACTGGGGACTTTGAAA----TCGATAGGGAGG---------A--CAAAAGAGACTTGCT-ACAA-TA-C-ATGGAACG-CC---TTGGTCTCA-T-TTTTGTTGGAAAGAAGGCACA--TTACATTCCGT-GTATGAACAAA-CAG-ACATTT-GCTGTTGAAC-AACAGAAA-GATTTG--CAATCATTTCC-AAGTCAAACATCAGTATTGGTCTTCCGATTTCCTTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTGATTGTTG-CA----TGTTTGAC--ACAAACTGG-------------------TG--G--A----AACTGG-GTCATCC-T--GGAA-GACG-ATGGAC---TTTG--------TTTG--TT----TA---AAGACTTGGCTTGCTTT--GTCTTTAA-AAA-TCATACAGTA---GCTTT-GTC-TGTGAACAAATATTCAATTCAGC-TTCAGGTT--TTTCA--TTC-CAG-CAAA-GGTTCAATTCCACAAA---TTGTTACA-TTGGAA-ATC--CGTGATG---ATATCGAAC-GATTACTGAAGGGTCTCAC--CAGTAATT-TTCACAAAAAAATCATG----TA-CACTGTTGGATACCAA-TGCTCAAA-ACAGGAAGTGTTCA-TTGAACACG-ATGACT-------GCT------TTGTTGAAAAGAA--AGAAA---TCCACGG--GAA-----AG-G--AAGAATCACTTGCC---CAA-GACA--TGGAATGCGCAATCGCCACATCCTGGATGAATCAACTATCCTATTTCATTGG-A-ATAGGGTATTTA-----TTTTC--A---AATACG-------AATT-TC--CTATGTTAT------TAT--CTA-TATC-AACATCATTTtagtctaatcaattacaatttccatgtttcttttaacaggatgttctaggaaaaccaacaagtgagtaactataggaattgtatgaaataatatattatattagtttcaaaagtgtaattgcagttta
gi|5 : tgtttgcaaatgccttacctttatctttgCTCCTC-A-TATTT-----T--GTTTT-AGAGCTCCCACAAGCTC--TA-CGAGAACATACTGGATTACCTAAAGCACGACCAGCAT--CTCAAGAAACATTTGGCCAG---GGAACGATGTTTCGTTGTAGGGTTTAAG-TC-GGAT-GGTTCATCAT-TCGCAG-ATGCACTCTCTGGC-CTTGAGGA-ACGCATCGTTTCGATTGCAAACCAACCTAGATGGACGGAATCCA-TTCCAG-GGGATTGGGTAACTT-TTGAAGTG-GT-ACTTA-G-A----CAA--CTCA-AGG-A--AGATGGAAAG--AA-A--AT--TGTCCCTGTTA-AAA--CA-TTGTC-ACAGCTATGTT----T-TGGTGACAACA-AAGAAAAATC--CAAAC-AAATCAGCGATG-T-CCTGAGATTTTACCATGATATAGGCGTTATACTT-CACTTTGACGCAGG-TT--TTCTATCCGAA--AATGTCA-TTCTTGACATCCAA-TGGT-TT-GT-TGATTCTTTTAAG---AATATTATCACCG-ATCC--AAACCATTTTGTGGAGCTGGTTGAGAAC-AACGAT-GATTGGC----GTGCTTTTA-ACGAC--AACGGGCACATATCT-GACGA--TCTTTTGACGAAGATTTGGACAAGTCAGGAATTTAGAATCA--------------AAC-CAGATGTCAAAGTAAGCTTGTT-GCAA-TA-C-ATGGAACG-TC---TTGGTCTCA-T-TTACGCCGGTCGAGAGGCGCA--TTATATTCCGT-GCATGAACAAG-TTG-ACCTTT-GGTAGCAATG-AAGAGGAA-TATCTGC---GTTCCATTCAAAATAAAACATCAGTTTTGGTCTTCCGATTTCAATTTC---TGCCATA-CTTC-ATTT----TTTT---CCG-GCTGATCGTTG-CCT----GTTTGAC--GAATACCAA-------------------CAATG--G---AGAATGG-GACAT-TCT--GGAA-GACA-AAGGAC---TTCG--------TTTG--TT----CA---AAAACGTCGCGTGTTTT--CTCTTTAG-ATG-TCATACAGTA---ATTCT-GGC-TGTACACAAACATTCAATTCAGCTT-CAGATC--TTCCA--GCC-TAG-C-AATGACTCAAT--CAAGAA-GGATGTTACT-CTGAAA-GTT--CGTGACG---ATGTTGAAA-GATTACTGAAAGAACTGACTGAA--AACT-TTCACAAGAAAATCGTG----TA-TACTGCAGGATATCAA-TGTTCAAATACAGCAG--GTTTC-ATAGATATG-ATGACT-------G-C------TTGTCTGAGAAGA--AAAAA---TTCGT-G--GAA-----AG-G--AAAACTCCCATGTC---CGA-AACA--TGGAATGCTAAATCATCACGAACTGAAGGAGTCAACTCTTCTATATCATTGGAATGC-GGTAT--TA-----TTTTCTTATCAAACAAA-------AAAT-CC--AT-ATTTAT------T-TTGTTATCAAG-AACAAACTTTC--ATTACAATtttctcattttcgtatataggtataaagaattgtatacatcattttcagttaataatgatgataattttcttttaactaggatgtcctggccgtaccaaccggtgagtaag
gi|6 : ATAGCTTGAG-ATA--AT-CTGTGTTT---C--GTAGAATTTC--CTC--TCAACTTCTG-A-TATTTA----C--ATTAC-AGGACTCCAACACGTTA--TA-CAACAGCATACTGGATTATCTCCAATTCGACAGACAC--CTGAAAACGCACCTAGATAG---AAAACGCTGCTTTGTTCTAGGTTTTAGG-TC-AGAT-GGTTCCTTTT-TT-CAGGACACGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCAGTTGCTAAAGAAGATAGGTGGAAGGAAACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAATT-GT-ACTCA-G-A----GAA--CTCAAAGGTC--AAG--GAGAA--AG-A--ATGGTGTCG--GTTA-CAG--AA-TT-TAGAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCACGATATAGGCGTGCTACTA-CACTTTGATGAAAG-TT--CTCTAGCTGAA--ACTGTCA-TCATTAACATCCAA-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATCGTTGATAAC-AACCGC-GACTGGG----TTTCCTTTT-ACAAA--AGTGGTCACAT-CCTAGACAG--GCTTTTGACGACTATTTGGAGTATTCGGAACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTTA-T-TGCAGTTGGTACATACGCACA--TTACATTCCGT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AAGAGAAC-T-TTTGTTCAACTCCATCCAAAATAAAACATCGGTATTGGTCTTTCGATTTCAATTTC---TGCCATA-CTTCTTTTT----ATTT---CCG-ACTTATTGGTG-CTT---TGTTTGAC--AAAAACCAA-------------------TG--G--G---CGAATGG-ATCGT-T-T--GGAG-GACA-ATGGAC---TTTG--------TCTC--TA----CA---AAA--TTTGCTTG-TTT--GTCTATAA-GCG-ACACGCTGT----GCGCG-GGC-TGTGAATAGATATTCAATTCAGA--TCAGG-T--TTTCA--GCC-CAG-C-AG-GTTTTAATA-TGCAAAAGGATGTGACAGCTAGAA-ATCAGCGTGACA---ATATTGAGA-GATTACTGAATGGTCTAAC--AAAAAACT-TTCACAAGAAAGTGATG----TA-CAATGTCGGATATCAA-TGCTCAAG-GCAGGAAGTGTTTC-GCGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----AG-G--AAAAATTACTTGTC---CAA-AACA--TGGAATGATTAATCATCATATCCTGAGTGAATCCGCTCTTTTGGTCTATTGGAA-ACAGG-----TA-----TCTTT--ATC-AATAGG-------CGTT-CC--ATCATTTCT------T-T--TCA-CAAG-TACATTATTTCTAATGACAATGTATACAATGC-ATGCATATAATTTTAGTTTccattatttagaacgatgaatgatattttgccgctactaatgtgaatgttctttttttaattaggatgttcgagtggaaccaacgggtgagtaaat
gi|7 : GAACGGAACGCAAAA--TGAATCG--CTTGCT-ACAA-TA-T-ATGCAACG-GC---TTGGTCTCA-T-TGCAGTTGGTAAAAACAAACA--TTACATCCCCT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AACAGATC-T-TTT-TTCAATCTTA-CCAAAGTAAAACATCGGTATTGGTCTTTCAATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-CCTTATTGTTG-C-T---TGTTTGAC--GAAAACTAA--------------------A--A--G---CAAATGG-GCCGT-T-TT-GAAA-GACA-ATGGAC---TTTG--------TCTT--TA----CA---AAGACCTCGCTTGTTTT--GTTTATAA-GCG-ACATGTTGTA---GCGCT-GGC-TGTGCATAGATGTTCAATTCAGCTT-CAGGTC--TTTCA--GCC-CAGGC-AA-GGGTCAAT--CATGAAAG-ATGTCACA-TTAGAA-ATC--CGTGACG---ACATTGAAA-TGTTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CAATGTAGGATATCAA-TGCTCAAT-GCAGGAAGTGTTTC-GAGAACATG-ATGCCT-------ATT------TTATCAAAGAGAA--AGGAA---TTTACGG--GAA-----AG-G--AGAAATCACCTGTC---CAG-AACA--TGGAATGTTCAATCATCATATCCTGAGCGAATCCGCTCTGTTAGGCTATTGGAA-ACAGG-----TA-----TCGTC--ATT-CTTTGGTTTTTGACAGT-TC--ATCATTTAT------T-T--TT--CAGG-TACTTTATTTCAAATGACAATGTATGCAATCC-ATGCAAATCATCTTAGTTT
gi|8 : ccttgggtgataATGGCTTTGAGATGGAATACTTTGTTTGCGCTTA-GGAATTTCACCTC--TCAACTTCTG-AGTATTTAATTTT--ACTACCAGGACTCCAACACGTTAGTTAACAACAGCATACTGGATTATCTCCAATTCGACAGGCACACCTGAAAACGCACCTAGATAAGAAAGAACGCTGCTTTGTTCTAGGTTTTAGGGTCAGGATTGGTTCCTTTTCTC-GAGGACACGCTTTCTGAAACTAGAGAAAGTGCA-AGTTTCAGTTGCTAAAGAAGATAG-TGGAAGGAAACCAGTTCCTATCAGACTGGGCATTGTGCTGAAATT-GTCACTCA-GCA----GAAACTTCAAAGG-TCTAAG--GAGAA--AGGA--ATGTGGTCG---TTA-CAGG-AA-TT-TAGAGAG---TGTG----TGTGGGGCAAACGGAAGAGAAATATACGCACCAAATGAAGGATAATACCTAAAGTTCTACCACGATATAGGCGTGCTACTACCACTTTGATGAAAGTTT--CTCTAGCTGAA--ACTGTCATTCATTAACATCCAACTGGTGTTGGT-TGATTCCTT-AAG---AACATAATAACTGCATCCAAAAACCATGTCA-AGATATCGTTGATAAC-AACCGCAGACGGG------TTCCTTTTGACAAAATATCGGTCACAT--CTAGACAGGCGCTTTTGACCACTATTTGGGGTATTC-GAACTTTGAAATCAG-CGCTGGGAAAGACAT-C-AAA--CAAAGCAAA--TGTT-GCAAGTA-TAATGCAGCGAGC---TTGGTCGTATT-TGCAGTTGGTACATACGCACACCTTACATTCCGTAGTATGAACAAGACTGCACCTTGAGGT-TCAAGGAAAGAGAAC-T-TT--TCCAAacaatgttttccttttttctacaggatgtcaaagtaacaggtatgaatctttatttaagatcccgattaaatgaacattgtttcaaaaaaatacattt
gi|9 : cTCCGAC-CTAGAAAA-CTGTATTGTTTCTATCGCGAAAGAAGACAAATGGAAAGAATCTA-TTCCCA-AGGCATGGTCATT-T-ATGGAATTGGT-GTTCATG-AATTTGAA--AAAAGGGG-TTAAAA--GTGAA--AG-A--AT--TTTTG--ACCAGCAGGTAA-TT-TC--AAGAATTATTTCTAT-CAGCGAGCTCG-AAGAGAGATA--tcca
gi|9 : ggataaggacgagttttatgataaccttttggatttgctaccaaaagatgatgcagagcttaaaaagcacttttgtaggagtagatgtttctttgtcggcttaccttgtgatgaaaacagtttcttagatcctttgATGACATCGGTATGATTCTT-TACTTCAATGAAAA-TGGACTCT--CAGAATCACTG--G-TTACTGATGTCCAA-TGGT-TT-GT-TGATTCTTTCAAA---TTTATCATATCAG-ACAG--AAAGCATGTCAGAGATTTAG-CGAAAACTGACCAG-GACTGGCAATATTTCCttggttggattttgaagtagttcgtgtggaggttcaagacgctctgcgttttttcaatgacatcggtatgattctttacttcaatgaaaatggactctcagaatcactggttactgatgtccaatggtttgttgattctttcaaatttatcatatcagacagaaagcatgtcagagatttagcgaaaactgaccaggactggcaatatttccaccaatcaggatatct
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGATAAGGACGAATTTTATGATAACCTTTTGGATTTGCTACC
Alignments
lowQualScore : 1 111 1 111 1 22222222 111 3333 11 11 222222 11111 111 2222 11111111 6666666666666666666666666666666 1111 11111111 222 1 1 1 11 1111 1111111 111111 11111 22222 11111 22222222 444444444444444444444 11
lowQualScore : 1 0 444 0 4 444 0 5 77 888 5 5 77777777 999 888 5 4 1 222 77 1 11 000 0 5 5 5 1 5 66 1 5 5 0 4 2 4 1 5 4 1 4 4 4 4 4 8888 55 8888 55 11 4 11 1 55 4 99 4 000000 0 2 8888 4 44 55 3 4 0 0 4 4 1 0 33 3 55 8 44 3 2 3 3 3 3 0 555 1 1 3 44 1 0 7 3 55555 4 66 66 888 1 11 1 2 1 0 7777 0 0 2 77 55 2 4 8 4 4 1 3 4 777 4 4 1 66 5 666 5 5 5 222 1111 4 2 1 777 4 4 9999 777 55 1 77777777 66 6666666666666666666666666666666 777 4 4444 8 4 777 44444444 666 99999 777 2 0 55 0 4 1 4 777 0 4 4 0 777 66 66 5 5 0 5 22 11 2 3 888 5 5 66 888 5 0 0 66 5 2 1 0000 5 5 5 5 1 5 6666666 444444 2 66 777 66 11111 4 66 6 777 4 66 1 1 1 22 0 5 11111 22222 66 7777 0 00000000 5 66 3 222222222222222222222 7 2 11 1 8 0
lowQualScore : . . ... . . ... . . .. ... . . ........ ... ... . . . ... .. . .. ... . . . . . . .. . . . . . . . . . . . . . . . . .... .. .... .. .. . .. . .. . .. . ...... . . .... . .. .. . . . . . . . . .. . .. . .. . . . . . . . ... . . . .. . . . . ..... . .. .. ... . .. . . . . .... . . . .. .. . . . . . . . . ... . . . .. . ... . . . ... .... . . . ... . . .... ... .. . ........ .. ............................... ... . .... . . ... ........ ... ..... ... . . .. . . . . ... . . . . ... .. .. . . . . .. .. . . ... . . .. ... . . . .. . . . .... . . . . . . ....... ...... . .. ... .. ..... . .. . ... . .. . . . .. . . ..... ..... .. .... . ........ . .. . ..................... . . .. . . .
lowQualScore : 0 0 000 0 2 000 8 0 99 666 0 0 99999999 555 999 7 0 0 444 99 6 44 000 7 7 7 7 0 7 44 4 0 0 5 2 2 2 0 0 4 7 0 0 0 0 0 5555 55 7777 55 00 0 00 4 55 0 55 0 888888 7 4 5555 0 55 55 7 4 1 1 4 4 0 1 88 6 00 1 66 3 0 3 3 3 3 8 888 4 0 3 66 0 6 3 6 33333 4 11 33 000 1 00 1 7 0 4 9999 7 9 2 77 55 3 0 0 0 0 0 0 0 000 4 4 1 11 0 222 0 0 0 222 2222 0 3 4 888 4 4 4444 888 33 7 22222222 11 2222222222222222222222222222222 999 4 9999 9 4 888 55555555 222 55555 000 5 7 55 3 4 9 4 888 1 4 4 7 333 11 99 0 0 0 0 00 99 2 4 000 0 0 99 888 0 2 4 99 0 2 0 6666 0 0 0 0 0 0 2222222 444444 2 11 888 11 11111 4 11 4 888 4 11 0 1 4 22 2 0 22222 55555 99 5555 2 55555555 0 99 1 000000000000000000000 5 5 66 0 0 2
consensus : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAA-------------------CG--G--G---CGAATGG-GTCGT-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTAT------T-T--TTA-CAAG-NACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
Reference ( family-4307 ) : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAA-------------------CG--G--G---CGAATGG-GTCGT-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTAT------T-T--TTA-CAAG-NACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
gi|1 : GCTTTAA-ATG--AT-CCATGTTT---CTTGTAGA-TTTC--CTC--TAAATTCCTT-A-TATTTT----T--ATTGC-AGGACTCCAACACGTTA--TA-CGAAAGCATACTGGATTATCTCCATTTCGACAAGCAC--CTGAAGACGCACCTAGACAG---AAAACGCTGCTTTGCTCTGGGTTTTAGG-TC-GAAT-GGTTCATTAT-TC-GAGGACATGCTTTCAGAA-TTAGAGAA-GTGCATAGCTTCAATTGCTGAAGACGAGAGGTGGAAGGATACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAGTC-GT-ACTCG-G-G----GAA--CTCAGAGG----AAA--GAAAATGAG-A--ATGATATCA--GTTT-CAG--AA-CT-TTCAAAGAATTGTT----T-TGGTGACAACA-AAGAGAAATA--CTCAC-AAATGAAGGATA-T-CCTAAAGTTCTTCCATGATATAGGTGATCTACTA-TACTTTGACGAGAA-TT--CTCTTGATGAA--ACTGTCA-TCATTGACATCCCG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCA--AAACCATATCATGGATTTTCTTGTTAAC-AACCCC-GATTGGC----TTTCCTTTT-ACAAT--AGTGGCCATAT-CCTAGACAG--GCTTTTGACCATCATTTGGAATATACAGAACTTTGACTTTGGTTACTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-ACAA-TA-T-ATGGAACG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACACACT--TTACATCCCGT-GTATGAACAAA-AGG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTC-TCCAA-TCTATTCAAAGAAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---TCG-TCTTATTGTTG--CT---TGTTTGAC--GAAAACCAA-------------------TG--G--T---C-AATGG-ATCGT-TAT--GAAA-GACA-ATGGAC---TTTG--------CCTC--TA----CA---AAAATGTCGCTTGTTTT--GTCTTCAA-GGA-ACATTCCGTA---GCGTT-AGC-GGTGGATAGATATTCAATTCAAC-TTCAGGTT--TTTCA--GCC-CAGCC-AA-GTATCAAT--CGCG-AAGGATGTCACA-CTAGAA-ATT--CGTGACA---ACATTGAAC-GATTACTGAATGGTCTCAC--AAGTAATT-TTCATAAGAAAGTTATA----TA-CACTGTAGGATATCAA-TGTTCAAT-GCAAGAAGTGTTTC-GAGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----GG-G--AATAATGACTTGTC---CAG-AACA--TGGAATGATTAACCATCATCCCTTGAGTGAATCTGCTCTCTTAGGTTATTGGAA-ACAGG-----TA-----ACTTC--ATC-TATACG-------TGTT-TT--ATAATTTATCCTTTAT-T--TCA-AGAG-TAAATTATGCACAATGGCCATATAAACATTTC-ATTCACATTGTTTCAGTTT
gi|10 : ttTTTCATTTTTAATTGCCATAACTTT-TTTTCCATACTTATCCCGCTCTTAT-GTTGGCCTCTGTGCTAGACCGGAAAA--AATACATTTATATATTGGTGCCGT-G--GAGCCGAATCG-TGCCT-T-T--GGAATGACATATGGACGCCTTTGCTCTGGCATTTC--TTAGCACAGAGAAACCTTCGCTTGTTTTCCGTCTATAATATGTACATGTTGTATGAGCACTTGGCATGTGAATAGATATTCAATTCAGCT--CAGGTTCTTTTCAAAGCCTCAG-CCAACGGAT-AAT--CGTGAAAG-ATGTCACA-CTAGAACATC--CGTGATAGATATATTGAAATGATTGCTGAATGG-CTCA----AGTAATTGTTCACAAGAAA-TAATGGGTGTAACAATGTAAGGTATCAACTGTT-AAA-GCAG-AGGTGTTTCCGAGAGCACGCATGACTCCCGCTTGTTCTAAAGTTAGGGAAGAGAACTAGAAAATTTCTATGGAGGAACTGTGAGAG--AGACAT-ATCTGTCTGTCAGCAACGGGTGGAATGTTC-ATTATCataatgataatatttcttttattcaggatgtcctagtcgaagtaagaggtaagtctcttcatttacgatattgattaactgagcacagtgattacaaataattcat
gi|11 : cCTAACATTGTTCAATGACATTGGCGTTATTCT----CTTCCAC---AC-TT--C-CT--CTGAT--TCCATTA-TTCTTGATGTTCAG-TGGT-TT-GT-GAATGCCTTCAAA---CACATTATAACAG-ATGA--AGAGCATG
gi|12 : aactgcaCCTA-CAGACTGGGCATTGT-CTGAAATA-AT-TCTCA-G-A----GAA--CACAAAAGTC--AAG--GAGAA--AG-A--ATGATATCG--GTTA-CAG--AA-TT-TGAAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CACAC-AAATGAGGGATA-T-CCTAAAGTTCTACCATGATATTGGCGTACTACTA-TACTTTGACGAGAG-TT--CTCTAGCCGAA--ACAGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGGGATATTGTTGATAGC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGTGGTCACAT-CCTAGACAG--ACTTTTGACCACTATTTGGAATAGTCGGAACTTTGAAATTAGTCACTGGGAAAGCAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-CA-T-ATGCAGCG-AC---TTGcaatgagtgatatagaggacaaacatttcaatgaatggatgaagttcaccgagaatggaattttgccaaagaacctagtgaaagcaatctggaaaggaccagagttattcactgagcacacagaagatctaatcattcacatgatcagacttgggatgattgctgaaatggaagagggagaaacattttatgtcccttgcatgaacaaacaaaagtatgacaaggctgtcttaaacaactgtacttgttcttccactgtttgcttcatgtttgaatatctgccattggtgattttccaccgcttagttgctacctgcatgacaaag
gi|13 : taT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----ACA--GAAAATGAG-A--ATGACATCG--GTTG-CAA--AAATT-TCAA-AGAAGTGTT----T-TGGTGAAAACA-AAGATAAGTA--TTCAC-AAATAAAGGATA-T-CCTAAAGTTATACCATGACATAGGCTTGATACTA-CACTTTGACGAGAG-TT--CTCTTGCCGAT--TCTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACTG-ATCC--AAACCACGTCAGGGATATTGTTGATAAC-AATCGT-GATTGGT----TTTCCTTTT-ACAAA--AATGGTCATAT-CCGCGACAG--GCTTTTGAAAACAATTTGGAACAGACAGCACTTTACAAT
gi|14 : TTCATTTTC---TGCCATA-CTTC-ATTT----TTTT---TCG-GCTGCTCGTGG-CCT----GTTTGAC--GAAGACCAA-------------------CA--GTGG---AGAATGG-GCCAT-TCT--GGAA-GACA-AAGGGC---TTCG--------TTTG--TT----CA---AAAACGTGGCGTGTTTT--CTCTAaaa
gi|15 : GAGAA--AGAAA---TTTATGG--AAA-----AC-G--AGAAATTTCTTGTC---CAG-AACA--TGGAATGTTCAATTATCATATTCTGACTGAGTCCGCTCTTATAGGCTACTGGAA-ACAGG-----TA-----TATTC--ATC-CTTAGG-------TGTT-TG--A-AATTTcnggtcattata
gi|16 : --ACTG--G-TTACTGATGTC-AA-TGGT-TT-GTCTGATTCTTTCAAGTTTATCAT-GTCAGGG-A-CA--AAATCATGTCCGAGATGTTGGCGGAAACTGACAAG-GATTGGCAAA-TTTCc
gi|17 : cagaatcTTG--------TCTC--TA----CA---AAAATGTTGCTTGTTTT--GTATATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGCATAGATATTCAATTCAGA-TTCAGGTT--TTCCaaaccgatgcaggatatc
gi|18 : AAAG-CAAAA--CA--GCAGCGTTGTTTGCAAATAAT-ATGGC-CG-GCCCTTTGGCTTCA-T-CGCAGTTGGTACAGACACACA--TTACA
gi|19 : GTTTAAA-ATT--AT-ACATGTTT---CTTGTACA-TTTC--CTA--TAAACGACTG-A-TATTTA----T--ATTGC-AGGACTCCAACATGTT
gi|2 : atTGCTT---TTTGTA-AATTTC--ATA--CAAATTTCTG-A-TATTTA----C--ATTGT-AGGATTCTAACATGTTG--TA-CAACAGCATACTGGATTATCTAAAAGATGATAAGCAC--CTGAAGCCGCACCTAAGTAG---AAAACGATGCTTCGTTCTGGGTTTTAAG-TC-AGAT-GGTTCATTTT-TC-CAGGACGCACTTTCTGAA-CTAGAGAA-GTGCATAGTTTCATTTGCTAAAGAAGAGAGGTGGAAAGAGACAA-TTCCTA-CAGACTGGGCAGTGT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----AAA--GAAAA--AG-AGAATGATGTCG--GTTG-CAC--AA-TTATCG-CAGAAATGTT----T-TGGTACAATCC-AGGAGAAATA--CGCAC-AAATGAAAGATA-T-CATAAAGCTCTACCATGATATAGGCGTTATACTA-CACTTTGAGGAGAG-TT--CTCTTGCCGAA--ACTGTCA-TCATTGACATCAAG-TGGT-TT-GT-TGATTGCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATTATTGATAAC-AACCGT-GATTGGC----TTTCCTTTT-ACAGA--AGCGGTCATAT-CCTAGACAG--ACTTTTGACCACTATTTGGGATAGTCAGCTCTTTGAAGT
gi|2 : AGAAAT-CAGAG--CAAAACAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTCA-T-CGCAGTTGGTACAGACACGCA--TTACATCCCCT-GTATGAACAAG-TTG-ACCTTT-GGTAGCAAGG-AAGAGAGC-T-TT-GTTCG-CTCTATCAAAAGTAAAACATCGGTATTGGTCTTTCGATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT----GTATGAC--GAAAACCAAT------------------CG---------TGAATGG-ATCGT-T-T--TGAACAACA-ATGGAC---TTTG--------TCTC--TT----CA---AAAATGTCGCTTGTTTT--GTCTATAA-GCG-ACATGTTGTA---GCGTT-GGC-TGTGAATAAATATTCAATTCAGATT-CAGGTT--TTTCA--GCC-CAGCC-AA-ACGCCAAT--CGC-AAAAGATGTCACA-CTAGAG-ATC--CGTGACA---ATATTGAAA-AATTGCTGAATGATCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CACTGTGGGGTATCAA-TGTTCAAA-GCAGGAAGTGTTCA-GAGAACATG-ATGACT-------GTT------TTATCAAAGAGAC--TGAAA---TTTATAG--GAA-----AG-G--GGAAATTACTTGTC---CAG-AACA--TGGGATGTTCAATCATCACACTCTGAGTGAATCCGCTCTTTTAGGCTATTGGAA-ACAGG-----TA-----TCTTA--ATC-CGGAAG-------TGTT-TA--ATAGTTGATAA----T-T--T-----------ATTATTTCAAATGACAATGTATAC-ATACAATGCACACCGTTATAGTTTggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattagaaatcagagcaaaacaaatttgttgcaatatatgcagcggcttggtctcatcgcagttggtacagacacgcattacatcccctgtatgaacaagttgacctttggtagcaaggaagagagctttgttcgctctatcaaaagtaaaacatcggtattggtctttcgatttcattttctgccatatttcttttatttccgtcttattgttgcctgtatgacgaaaaccaatcgtgaatggatcgttttgaacaacaatggactttgtctcttcaaaaatgtcgcttgttttgtctataagcgacatgttgtagcgttggctgtgaataaatattcaattcagattcaggtttttcagcccagccaaacgccaatcgcaaaagatgtcacactagagatccgtgacaatattgaaaaattgctgaatgatctcacaagtaactttcacaagaaagtgatgtacactgtggggtatcaatgttcaaagcaggaagtgttcagagaacatgatgactgttttatcaaagagactgaaatttataggaaaggggaaattacttgtccagaacatgggatgttcaatcatcacactctgagtgaatccgctcttttaggctattggaaacaggtatcttaatccggaagtgtttaatagttgataatttattatttcaaatgacaatgtatacatacaatgcacaccgttatagttttattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|3 : tgctttttgtaaatttcatacaaatttctgatatttacattgtaggattctaacatgttgtacaacagcatactggattatctaaaagatgataagcacctgaagccgcacctaagtagaaaacgatgcttcgttctgggttttaagtcagatggttcatttttccaggacgcactttctgaactagagaagtgcatagtttcatttgctaaagaagagaggtggaaagagacaattcctacagactgggcagtgtctgaagtcgtactcagggaactcagaggaaagaaaaagagaatgatgtcggttgcacaattatcgcagaaatgttttggtacaatccaggagaaatacgcacaaatgaaagatatcataaagctctaccatgatataggcgttatactacactttgaggagagttctcttgccgaaactgtcatcattgacatcaagtggtttgttgattgctttaagaacataataactgatccaaaccatgtcagagatattattgataacaaccgtgattggctttccttttacagaagcggtcatatcctagacagacttttgaccactatttgggatagtcagctctttgaagtggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattTTGTA--ATTTT--CTAAATAAAATTTCG-A-TGCTT---------TT-T-AGGATCGTGATACGCTG--TA-CTACAACATACTGGATTGCATTCAGGACGACAAACAT--CTGAAGCAACACTTAGCAAG---AGAGCGATGCTTTGTTCTTGGTTTTAAA-TC-TGAT-GATTCATCAT-TC-GAGGACACGCTTTTTGAA-TTAGAGAA-GTGCATAGTTTCGATTGCTATGCAAGACAGATGGAAGGAATCCA-TTCCTA-CGGACTGGGCACTGA-CTGAGGTC-GT-ACTCA-G-A----AAA--CTCAGAGAAC--AAA--AAAAG--AG-A--ATGATATCA--GTTA-CAG--AA-TTATCGAG-GAAATGTT----T-TGATAAAAACA-AAGAAAAATA--TACAC-AGATCAACGACA-T-TCTAAAATTTTACCATGATATAGGCGCTATCCTA-CACTTTGACGAGAG-TT--CTCTTGCCGAC--ATTGTCA-TCGTTGACATCCAG-TGGT-TT-GT-TGATTGCTTCAAG---AACATAATAACCG-ATCC--AAACCATGCCAGGGAGCTTGTCCACAAC-AAAGGC-GAATGGT----TAGCGTTTA-ACGAA--AACGGTCATAT-ACAAGACAG--TCTCTTGACCAATATTTGGAGCAGTCGACAGTTTGAAATTAATT-CCG---ATGACA---AAAA--C------AATCTGTT-AAAA-TA-C-ATGGAACG-TC---TTGGTCTTA-TCTATA-TTGGCAGAGAGGCACA--TTTTATCCCTT-GCATGAACAAG-CGG-ACCTTC-ACGACCGAAC-AAAAGAACAA-ATTG-CAAACTT--TCCCAAGTCAAACGTCTGTCCTGGTCTTCCGGTTTCCATTTC---TGCCATA-TTTC-ATTT----ATTT---CCG-TCTGATTGTTG--CT---TGTCTGAC--AAAGACCAA-------------------TG--G--A----GAATGGAG--AT-T-TCCAAAA-GACA-AAGAA-----TTG--------TCTTTATA----CA---AAAACCTAGCGTGCTTT--CTCTGTAA-GAG-CCACACTGTA---GTCCT-TGC-TGTCAATAAATATTCAGTTCAGC-TTCAGGTT--TTTCA--CCC-CAG-C-AATGTTTCAAT--C-CCACAAACTGTTACA-TTGGAA-ATC--CGTGCTG---ATATTGAAA-AGTTACTGAGGGGTCTCAC--CAGTAACT-TTCACAAAGAAATCATG----TA-CACTGTAGGATATCAA-TGCTCACA-GCAGGATGTGTTTC-GTGAACATG-ATGATT-------GTT------TCGTGGAAGAAAA--AGATA---TTCAGGG--GAA-----AG-GCAAGCAG--ACTTGCC---CAA-TCCA--CGAGATGGCTAATTTCCATACCCTGAATGAATCAGATCTCCTTCATCATTGGAA-TAAGG-----TATATTGTTTTT--A---GATAGA-------TGTTATCCGATACATCAT------T-T-------AAGAAACATTA-CTCTTAT--CAAGTTATAC---CT-ATACACATtattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|4 : atttttgatATTCT--CTC--TAAGTTT-TGCA-TATTT-----TCGATTTT-AGAATGCCAACACGCTC--TA-CTACAGTATACTGGATTACATACAGGATGACAAAGAG--CTGAGGTCACACTTATCCAG---GGAACACTGCTTCGTTATAGGATTTAAG-TC-GGAT-GGTACAGCAT-TC-CAAGACACGCTGTCTGAA-TTAGAGAA-GTGTATTGTATCTATTGCTAGACAAGACAGATGGAAAGAATCCA-TTCCTA-TTGATTGGGCACTGG-CTGAAAGC-GT-ACTCA-G-A----GAT--CTTAGAGG----AAA--GAAAA--AG-AGAATGGCGTCG--GTTG-AAG--AC-TTATC-ATGGCAATGTT----T-TGGTCAAATCA-AAGAAAAATG--CTCAC-AAATCAGCGATA-T-CCTGAAGTTTTACCATGAAATAGGCATTATCCTA-CACTTTCCTGAGAG-TT--CGCTTGCCCAA--ACTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TAATGCCTTCAAG---AACATAATAACGG-ATCC--AAACCACGTCAGAGAATTTGTTATCAAC-CACCGC-GAATGGT----TGGATTTTA-ACAAA--AACGGCCATAT-TCAAGACAG--TCTTTTGACAAAGATTTGGAGTACTGGGGACTTTGAAA----TCGATAGGGAGG---------A--CAAAAGAGACTTGCT-ACAA-TA-C-ATGGAACG-CC---TTGGTCTCA-T-TTTTGTTGGAAAGAAGGCACA--TTACATTCCGT-GTATGAACAAA-CAG-ACATTT-GCTGTTGAAC-AACAGAAA-GATTTG--CAATCATTTCC-AAGTCAAACATCAGTATTGGTCTTCCGATTTCCTTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTGATTGTTG-CA----TGTTTGAC--ACAAACTGG-------------------TG--G--A----AACTGG-GTCATCC-T--GGAA-GACG-ATGGAC---TTTG--------TTTG--TT----TA---AAGACTTGGCTTGCTTT--GTCTTTAA-AAA-TCATACAGTA---GCTTT-GTC-TGTGAACAAATATTCAATTCAGC-TTCAGGTT--TTTCA--TTC-CAG-CAAA-GGTTCAATTCCACAAA---TTGTTACA-TTGGAA-ATC--CGTGATG---ATATCGAAC-GATTACTGAAGGGTCTCAC--CAGTAATT-TTCACAAAAAAATCATG----TA-CACTGTTGGATACCAA-TGCTCAAA-ACAGGAAGTGTTCA-TTGAACACG-ATGACT-------GCT------TTGTTGAAAAGAA--AGAAA---TCCACGG--GAA-----AG-G--AAGAATCACTTGCC---CAA-GACA--TGGAATGCGCAATCGCCACATCCTGGATGAATCAACTATCCTATTTCATTGG-A-ATAGGGTATTTA-----TTTTC--A---AATACG-------AATT-TC--CTATGTTAT------TAT--CTA-TATC-AACATCATTTtagtctaatcaattacaatttccatgtttcttttaacaggatgttctaggaaaaccaacaagtgagtaactataggaattgtatgaaataatatattatattagtttcaaaagtgtaattgcagttta
gi|5 : tgtttgcaaatgccttacctttatctttgCTCCTC-A-TATTT-----T--GTTTT-AGAGCTCCCACAAGCTC--TA-CGAGAACATACTGGATTACCTAAAGCACGACCAGCAT--CTCAAGAAACATTTGGCCAG---GGAACGATGTTTCGTTGTAGGGTTTAAG-TC-GGAT-GGTTCATCAT-TCGCAG-ATGCACTCTCTGGC-CTTGAGGA-ACGCATCGTTTCGATTGCAAACCAACCTAGATGGACGGAATCCA-TTCCAG-GGGATTGGGTAACTT-TTGAAGTG-GT-ACTTA-G-A----CAA--CTCA-AGG-A--AGATGGAAAG--AA-A--AT--TGTCCCTGTTA-AAA--CA-TTGTC-ACAGCTATGTT----T-TGGTGACAACA-AAGAAAAATC--CAAAC-AAATCAGCGATG-T-CCTGAGATTTTACCATGATATAGGCGTTATACTT-CACTTTGACGCAGG-TT--TTCTATCCGAA--AATGTCA-TTCTTGACATCCAA-TGGT-TT-GT-TGATTCTTTTAAG---AATATTATCACCG-ATCC--AAACCATTTTGTGGAGCTGGTTGAGAAC-AACGAT-GATTGGC----GTGCTTTTA-ACGAC--AACGGGCACATATCT-GACGA--TCTTTTGACGAAGATTTGGACAAGTCAGGAATTTAGAATCA--------------AAC-CAGATGTCAAAGTAAGCTTGTT-GCAA-TA-C-ATGGAACG-TC---TTGGTCTCA-T-TTACGCCGGTCGAGAGGCGCA--TTATATTCCGT-GCATGAACAAG-TTG-ACCTTT-GGTAGCAATG-AAGAGGAA-TATCTGC---GTTCCATTCAAAATAAAACATCAGTTTTGGTCTTCCGATTTCAATTTC---TGCCATA-CTTC-ATTT----TTTT---CCG-GCTGATCGTTG-CCT----GTTTGAC--GAATACCAA-------------------CAATG--G---AGAATGG-GACAT-TCT--GGAA-GACA-AAGGAC---TTCG--------TTTG--TT----CA---AAAACGTCGCGTGTTTT--CTCTTTAG-ATG-TCATACAGTA---ATTCT-GGC-TGTACACAAACATTCAATTCAGCTT-CAGATC--TTCCA--GCC-TAG-C-AATGACTCAAT--CAAGAA-GGATGTTACT-CTGAAA-GTT--CGTGACG---ATGTTGAAA-GATTACTGAAAGAACTGACTGAA--AACT-TTCACAAGAAAATCGTG----TA-TACTGCAGGATATCAA-TGTTCAAATACAGCAG--GTTTC-ATAGATATG-ATGACT-------G-C------TTGTCTGAGAAGA--AAAAA---TTCGT-G--GAA-----AG-G--AAAACTCCCATGTC---CGA-AACA--TGGAATGCTAAATCATCACGAACTGAAGGAGTCAACTCTTCTATATCATTGGAATGC-GGTAT--TA-----TTTTCTTATCAAACAAA-------AAAT-CC--AT-ATTTAT------T-TTGTTATCAAG-AACAAACTTTC--ATTACAATtttctcattttcgtatataggtataaagaattgtatacatcattttcagttaataatgatgataattttcttttaactaggatgtcctggccgtaccaaccggtgagtaag
gi|6 : ATAGCTTGAG-ATA--AT-CTGTGTTT---C--GTAGAATTTC--CTC--TCAACTTCTG-A-TATTTA----C--ATTAC-AGGACTCCAACACGTTA--TA-CAACAGCATACTGGATTATCTCCAATTCGACAGACAC--CTGAAAACGCACCTAGATAG---AAAACGCTGCTTTGTTCTAGGTTTTAGG-TC-AGAT-GGTTCCTTTT-TT-CAGGACACGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCAGTTGCTAAAGAAGATAGGTGGAAGGAAACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAATT-GT-ACTCA-G-A----GAA--CTCAAAGGTC--AAG--GAGAA--AG-A--ATGGTGTCG--GTTA-CAG--AA-TT-TAGAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCACGATATAGGCGTGCTACTA-CACTTTGATGAAAG-TT--CTCTAGCTGAA--ACTGTCA-TCATTAACATCCAA-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATCGTTGATAAC-AACCGC-GACTGGG----TTTCCTTTT-ACAAA--AGTGGTCACAT-CCTAGACAG--GCTTTTGACGACTATTTGGAGTATTCGGAACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTTA-T-TGCAGTTGGTACATACGCACA--TTACATTCCGT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AAGAGAAC-T-TTTGTTCAACTCCATCCAAAATAAAACATCGGTATTGGTCTTTCGATTTCAATTTC---TGCCATA-CTTCTTTTT----ATTT---CCG-ACTTATTGGTG-CTT---TGTTTGAC--AAAAACCAA-------------------TG--G--G---CGAATGG-ATCGT-T-T--GGAG-GACA-ATGGAC---TTTG--------TCTC--TA----CA---AAA--TTTGCTTG-TTT--GTCTATAA-GCG-ACACGCTGT----GCGCG-GGC-TGTGAATAGATATTCAATTCAGA--TCAGG-T--TTTCA--GCC-CAG-C-AG-GTTTTAATA-TGCAAAAGGATGTGACAGCTAGAA-ATCAGCGTGACA---ATATTGAGA-GATTACTGAATGGTCTAAC--AAAAAACT-TTCACAAGAAAGTGATG----TA-CAATGTCGGATATCAA-TGCTCAAG-GCAGGAAGTGTTTC-GCGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----AG-G--AAAAATTACTTGTC---CAA-AACA--TGGAATGATTAATCATCATATCCTGAGTGAATCCGCTCTTTTGGTCTATTGGAA-ACAGG-----TA-----TCTTT--ATC-AATAGG-------CGTT-CC--ATCATTTCT------T-T--TCA-CAAG-TACATTATTTCTAATGACAATGTATACAATGC-ATGCATATAATTTTAGTTTccattatttagaacgatgaatgatattttgccgctactaatgtgaatgttctttttttaattaggatgttcgagtggaaccaacgggtgagtaaat
gi|7 : GAACGGAACGCAAAA--TGAATCG--CTTGCT-ACAA-TA-T-ATGCAACG-GC---TTGGTCTCA-T-TGCAGTTGGTAAAAACAAACA--TTACATCCCCT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AACAGATC-T-TTT-TTCAATCTTA-CCAAAGTAAAACATCGGTATTGGTCTTTCAATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-CCTTATTGTTG-C-T---TGTTTGAC--GAAAACTAA--------------------A--A--G---CAAATGG-GCCGT-T-TT-GAAA-GACA-ATGGAC---TTTG--------TCTT--TA----CA---AAGACCTCGCTTGTTTT--GTTTATAA-GCG-ACATGTTGTA---GCGCT-GGC-TGTGCATAGATGTTCAATTCAGCTT-CAGGTC--TTTCA--GCC-CAGGC-AA-GGGTCAAT--CATGAAAG-ATGTCACA-TTAGAA-ATC--CGTGACG---ACATTGAAA-TGTTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CAATGTAGGATATCAA-TGCTCAAT-GCAGGAAGTGTTTC-GAGAACATG-ATGCCT-------ATT------TTATCAAAGAGAA--AGGAA---TTTACGG--GAA-----AG-G--AGAAATCACCTGTC---CAG-AACA--TGGAATGTTCAATCATCATATCCTGAGCGAATCCGCTCTGTTAGGCTATTGGAA-ACAGG-----TA-----TCGTC--ATT-CTTTGGTTTTTGACAGT-TC--ATCATTTAT------T-T--TT--CAGG-TACTTTATTTCAAATGACAATGTATGCAATCC-ATGCAAATCATCTTAGTTT
gi|8 : ccttgggtgataATGGCTTTGAGATGGAATACTTTGTTTGCGCTTA-GGAATTTCACCTC--TCAACTTCTG-AGTATTTAATTTT--ACTACCAGGACTCCAACACGTTAGTTAACAACAGCATACTGGATTATCTCCAATTCGACAGGCACACCTGAAAACGCACCTAGATAAGAAAGAACGCTGCTTTGTTCTAGGTTTTAGGGTCAGGATTGGTTCCTTTTCTC-GAGGACACGCTTTCTGAAACTAGAGAAAGTGCA-AGTTTCAGTTGCTAAAGAAGATAG-TGGAAGGAAACCAGTTCCTATCAGACTGGGCATTGTGCTGAAATT-GTCACTCA-GCA----GAAACTTCAAAGG-TCTAAG--GAGAA--AGGA--ATGTGGTCG---TTA-CAGG-AA-TT-TAGAGAG---TGTG----TGTGGGGCAAACGGAAGAGAAATATACGCACCAAATGAAGGATAATACCTAAAGTTCTACCACGATATAGGCGTGCTACTACCACTTTGATGAAAGTTT--CTCTAGCTGAA--ACTGTCATTCATTAACATCCAACTGGTGTTGGT-TGATTCCTT-AAG---AACATAATAACTGCATCCAAAAACCATGTCA-AGATATCGTTGATAAC-AACCGCAGACGGG------TTCCTTTTGACAAAATATCGGTCACAT--CTAGACAGGCGCTTTTGACCACTATTTGGGGTATTC-GAACTTTGAAATCAG-CGCTGGGAAAGACAT-C-AAA--CAAAGCAAA--TGTT-GCAAGTA-TAATGCAGCGAGC---TTGGTCGTATT-TGCAGTTGGTACATACGCACACCTTACATTCCGTAGTATGAACAAGACTGCACCTTGAGGT-TCAAGGAAAGAGAAC-T-TT--TCCAAacaatgttttccttttttctacaggatgtcaaagtaacaggtatgaatctttatttaagatcccgattaaatgaacattgtttcaaaaaaatacattt
gi|9 : cTCCGAC-CTAGAAAA-CTGTATTGTTTCTATCGCGAAAGAAGACAAATGGAAAGAATCTA-TTCCCA-AGGCATGGTCATT-T-ATGGAATTGGT-GTTCATG-AATTTGAA--AAAAGGGG-TTAAAA--GTGAA--AG-A--AT--TTTTG--ACCAGCAGGTAA-TT-TC--AAGAATTATTTCTAT-CAGCGAGCTCG-AAGAGAGATA--tcca
gi|9 : ggataaggacgagttttatgataaccttttggatttgctaccaaaagatgatgcagagcttaaaaagcacttttgtaggagtagatgtttctttgtcggcttaccttgtgatgaaaacagtttcttagatcctttgATGACATCGGTATGATTCTT-TACTTCAATGAAAA-TGGACTCT--CAGAATCACTG--G-TTACTGATGTCCAA-TGGT-TT-GT-TGATTCTTTCAAA---TTTATCATATCAG-ACAG--AAAGCATGTCAGAGATTTAG-CGAAAACTGACCAG-GACTGGCAATATTTCCttggttggattttgaagtagttcgtgtggaggttcaagacgctctgcgttttttcaatgacatcggtatgattctttacttcaatgaaaatggactctcagaatcactggttactgatgtccaatggtttgttgattctttcaaatttatcatatcagacagaaagcatgtcagagatttagcgaaaactgaccaggactggcaatatttccaccaatcaggatatct
blockSeqs : A G GGA A A GCG C A AC AAA C G AATTTT ACC AGT A A A AGA AC C GT GAA G A T T C GC G A A A G G A G T A G G C T C ATTT AC TCT TG TG G GA A CT G GT A ATCGAG T TCTA G GG TA A C A A T AC T GA A TC T G C G G C TTT T A C AA A T A CAATA G AT AT GCG C CT G G A GTCA C CG GT C T A A A C G A CCT T C C CC A ACT C A A AA TGTT C T A AAT A T CCAT ATC CT T GCCTCTGT CG TACATTTATATATTGGTGCCGTGGAGCC TG C TCC T T GCC CTCTGGCA TTA TAGCA GAG T CC T T T TGA T A TT CT AA T C C C GA TC G G AAG G C AG GAT T TG G G A GGTG A C T C A C CCCGCTT CTAAAG G CT ATT AG CTGTG A CA T TGT C GG T T C TA T GTATT TATTG TT TCAA TTTTTGAC A CG A TTTGTTATCAAGA A G AA A A
blockSeqs : G . T . G . G A . A . . TCG GC G . T T GGA . C CA . . . . A . C A . . G C A T . . A . . . . . . . TTA . . . GA A . . G . TGAAG G . . G . T . . . A A . . T . . A . . . . . A T . . A T . CAAA . . C A A CA G A C GTCG A T . G . G . . G G . . . . C . . TT . . . GA GTT C T C . . . . . G G CTTT . CAGTGGA GC . CT C . . . C T . G . . C . . . . TT . . . G A T CG A G C AAA . . . . . . . A G . . . . . A . . . C . . . . . . T . . . T C C TT . TAT . . TCC T . . A TATCTATATCA T T AA C .
blockSeqs : T . A . T . G A . A . . AT GT G . T A GGA . T CC . . . . A . G A . . T C A T . . G . . . . . . . TC . . . . A . . . . ATCGC A . . A . G . . . G A . . T . . A . . . . . A T . . G . . C . . C G C CT G A C ATT A G . T . . . . C A . . . . G . . CG . . . TA TGC T C A . . . . . T T CCT . CAATGGA AT . CT . . . . G A . G . . C . . . . TT . . . . . T TT . A A AGG . . . . . . . A C . . . . . T . . . G . . . . . . C . . . T C A CC . . . . TCC T . . A TTTCACAAGT T G A G .
blockSeqs : . . A . C . . AC TT C . G A GCA . A CC . . . . A . C G . . G T A T . . T . . . . . . . AC . . . . A . . . . ATCAT A . . C . A . . . T A . . T . . G . . . . . A G . . A . . T . . C A C AT G G C TCG A T . T . . . . G A . . . . A . . CA . . . T TGC T C A . . . . . T G CCT . TGGGC AG . TT . . . . C T . G . . A . . . . TT . . . . . . GT . A G AG . . . . . . . A C . . . . . T . . . T . . . . . . C . . . G T A CC . . . . TCA T . . A TTTTCAGGT A G . C .
blockSeqs : . A . C . . AC TT C . A C ATT . A AT . . . . T . C A . . A T G A . . G . . . . . . . TC . . . . G . . . . GTCAC A . . A . T . . . T A . . T . . A . . . . . A T . . C . . C . . A T A AG C G G GCG A C . C . . . . G A . . . . G . . TT . . . T TTT C T A . . . . . T G CTT . TCGT GT . T . . . . C A . C . . A . . . . TT . . . . . . AC . G A GG . . . . . . . G C . . . . . T . . . C . . . . . . T . . . C A A TC . . . . TTC A . . C TTAAGAA . .
blockSeqs : . . C . . T AC A . A C ATT . A AT . . . . T . G A . . A T A A . . A . . . . . . . A . . . . G . . . . TAGAG A . . A . A . . . T A . . A . . A . . . . . A C . . T . . T . . T T G AG G A G . G T . C . . . . G G . . . . C . . AT . . . T TG T . . . . . . . G G CAT . TGGA GA . T . . . . G T . T . . T . . . . TT . . . . . . TT . A G AG . . . . . . . G G . . . . . C . . . T . . . . . . C . . . C T C TT . . . . G A . . C AATTT
blockSeqs : . . . T . . T C . T . . A . . . . . . . . . . . . T . . . . TAGAG T . . A . G . . . T T . . A . . A . . . . . T G . . C . . T . . C T G CT T G A A T . T . . . . C A . . . . A . . AT . . . T TC . . . . . A T CCT . TGGA AT . T . . . . G T . G . . C . . . . T . . . . . . GG . . . . . . . . . . . . G . . . . . A . . . C . . . . . . . . . . A T C GT . . . . A C . . .
blockSeqs : . G . . . . . . . . . . . . . . . . . TCAA T . . G . G . . . G A . . A . . A . . . . . A C . . A . . C . . . G C CT T . A . . . C . . . . C G . . . . C . . . . . . C T CTT . AAGC GC . T . . . . C A . T . . C . . . . T . . . . . . . . . . . T
blockSeqs : . . . . . . . . . . . . . . . . . TCA . . . G . G T . . . . . A . . . . . A T . . A . . G . . . . . . . . C . . . . T A . C .
blockSeqs : G . . . . . . A . . . . . C T . . T . . .
blockSeqs : . . G . . . . . . A . .
blockSeqCons : C*** ** GTCG TGGA*************************** T*** TTTCCAAGT************
originalCons : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAA-------------------CG--G--G---CGAATGG-GTCGT-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTAT------T-T--TTA-CAAG-NACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
finalCons : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGGC---AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAACCAATGGA---------------------------GAATGG-GTCGT-TT---GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CAG-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTATTTTCCAAGT------------ACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGATAAGGACGAATTTTATGATAACCTTTTGGATTTGCTACC
Alignments
lowQualScore : 1 111 1 111 1 22222222 111 3333 11 11 222222 11111 111 2222 11111111 33333333333333333333 111 1 11111111 222 1 1 1 11 1111 1111111 111111 11111 22222 11111 22222222 444444444444444444444444 11
lowQualScore : 1 0 444 0 4 444 0 5 77 888 5 5 77777777 999 888 5 4 1 222 77 1 11 000 0 5 5 5 1 5 66 1 5 5 0 4 2 4 1 5 4 1 4 4 4 4 4 8888 55 8888 55 11 4 11 1 55 4 99 4 000000 0 2 8888 4 44 55 3 4 0 0 4 4 1 0 33 3 55 8 44 3 2 3 3 3 3 0 555 1 1 3 44 1 0 7 3 55555 4 66 66 888 1 11 1 2 1 0 7777 0 0 2 77 55 2 4 8 4 4 1 3 4 777 4 4 1 66 5 666 5 5 5 222 1111 4 2 1 777 4 4 9999 777 55 1 77777777 66 66666666666666666666 555 999999 777 4 4 3 66 8 4 777 44444444 666 99999 777 2 0 55 0 4 1 4 777 0 4 4 0 777 66 66 5 5 0 0 5 22 11 2 3 888 5 5 66 888 5 0 0 66 5 2 1 0000 5 5 5 5 1 5 6666666 444444 2 66 777 66 11111 4 66 6 777 4 66 1 1 1 22 0 5 11111 22222 66 7777 0 00000000 5 66 3 000000000000000000000000 7 2 11 1 8 0
lowQualScore : . . ... . . ... . . .. ... . . ........ ... ... . . . ... .. . .. ... . . . . . . .. . . . . . . . . . . . . . . . . .... .. .... .. .. . .. . .. . .. . ...... . . .... . .. .. . . . . . . . . .. . .. . .. . . . . . . . ... . . . .. . . . . ..... . .. .. ... . .. . . . . .... . . . .. .. . . . . . . . . ... . . . .. . ... . . . ... .... . . . ... . . .... ... .. . ........ .. .................... ... ...... ... . . . .. . . ... ........ ... ..... ... . . .. . . . . ... . . . . ... .. .. . . . . . .. .. . . ... . . .. ... . . . .. . . . .... . . . . . . ....... ...... . .. ... .. ..... . .. . ... . .. . . . .. . . ..... ..... .. .... . ........ . .. . ........................ . . .. . . .
lowQualScore : 0 0 000 0 2 000 8 0 99 666 0 0 99999999 555 999 7 0 0 444 99 6 44 000 7 7 7 7 0 7 44 4 0 0 5 2 2 2 0 0 4 7 0 0 0 0 0 5555 55 7777 55 00 0 00 4 55 0 55 0 888888 7 4 5555 0 55 55 7 4 1 1 4 4 0 1 88 6 00 1 66 3 0 3 3 3 3 8 888 4 0 3 66 0 6 3 6 33333 4 11 33 000 1 00 1 7 0 4 9999 7 9 2 77 55 3 0 0 0 0 0 0 0 000 4 4 1 11 0 222 0 0 0 222 2222 0 3 4 888 4 4 4444 888 33 7 22222222 11 11111111111111111111 666 777777 999 4 4 3 11 9 4 888 55555555 222 55555 000 5 7 55 3 4 9 4 888 1 4 4 7 333 11 99 0 0 0 0 0 00 99 2 4 000 0 0 99 888 0 2 4 99 0 2 0 6666 0 0 0 0 0 0 2222222 444444 2 11 888 11 11111 4 11 4 888 4 11 0 1 4 22 2 0 22222 55555 99 5555 2 55555555 0 99 1 111111111111111111111111 5 5 66 0 0 2
consensus : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAA--------------------CCAA---TGGA-G---AATGG-GTCG-T-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGC-TTCAGGTT--TTTCA--GCC-CA-G-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTAT------TTT----C-CA-AG-T--ACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
Reference ( family-4307 ) : ATGGCTTNAA-ATG--AT-CCGTGTTT---CTTGTAGAATTTC--CTC--TAAACTTCTG-A-TATTTA----T--ATTGC-AGGACTCCAACACGTTN--TA-CGACAGCATACTGGATTACCTNCAGNNCGACAAGCAC--CTGAAGACGCACCTAGNCAG---AGAACGCTGCTTCGTTCTAGGTTTTAGG-TC-GGAT-GGTTCATCNT-TC-CAGGACGCGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCGATTGCTAAAGAAGACAGGTGGAAGGAANCCA-TTCCTA-CGGACTGGGCATTGT-CTGAAGTC-GT-ACTCA-G-A----GAA--CTCAGAGG-C--AAA--GAAAA--AG-A--ATGATGTCG--GTTA-CAG--AA-TT-TCGAGAGAANTGTT----T-TGGTGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCATGATATAGGCGTNATACTA-CACTTTGACGAGAG-TT--CTCTNGCCGAA--ACTGTCA-TCATTGACGTCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACNG-ATCC--AAACCATGTCAGGGATNTTGTTGATAAC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGCGGTCACAT-CCTAGACAG--GCTTTTGACCACTATTTGGAGTAGTCGGNACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-TA-T-ATGNAGCG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACGCACA--TTACATCCCGT-GTATGAACAAG-NTG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTTGTCCAACTCTATCCAAAGTAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT---TGTTTGAC--GAAAA--------------------CCAA---TGGA-G---AATGG-GTCG-T-T-T--GGAA-GACA-ATGGAC---TTTG--------TCTC--TN----CA---AAAACGTCGCTTGTTTT--GTCTATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGAATAGATATTCAATTCAGCTTTCAGGTT--TTTCA--GCC-CA-G-C-AA-GNNTCAAT--CGCGAAAGGATGTCACA-CTAGAA-ATC--CGTGACG---ATATTGAAA-GATTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTNATG----TA-CACTGTAGGATATCAA-TGCTCAAA-GCAGGAAGTGTTTC-GNGAACACG-ATGACT-------GTT------TTATCGAAGAGAA--AGAAA---TTTATGG--GAA-----AG-G--AGAAATCACTTGTC---CAG-AACA--TGGAATGNTCAATCATCATACCCTGAGTGAATCCGCTCTCCTAGGCTATTGGAA-ACAGG-----TA-----TCTTC--ATC-NATAGG-------CGTT-TC--ATAATTTAT------TTT----C-CA-AG-T--ACATTATTTCNAATGACAATGTATACAATNC-ATGCACATCGTTTTAGTTT
gi|1 : GCTTTAA-ATG--AT-CCATGTTT---CTTGTAGA-TTTC--CTC--TAAATTCCTT-A-TATTTT----T--ATTGC-AGGACTCCAACACGTTA--TA-CGAAAGCATACTGGATTATCTCCATTTCGACAAGCAC--CTGAAGACGCACCTAGACAG---AAAACGCTGCTTTGCTCTGGGTTTTAGG-TC-GAAT-GGTTCATTAT-TC-GAGGACATGCTTTCAGAA-TTAGAGAA-GTGCATAGCTTCAATTGCTGAAGACGAGAGGTGGAAGGATACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAGTC-GT-ACTCG-G-G----GAA--CTCAGAGG----AAA--GAAAATGAG-A--ATGATATCA--GTTT-CAG--AA-CT-TTCAAAGAATTGTT----T-TGGTGACAACA-AAGAGAAATA--CTCAC-AAATGAAGGATA-T-CCTAAAGTTCTTCCATGATATAGGTGATCTACTA-TACTTTGACGAGAA-TT--CTCTTGATGAA--ACTGTCA-TCATTGACATCCCG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCA--AAACCATATCATGGATTTTCTTGTTAAC-AACCCC-GATTGGC----TTTCCTTTT-ACAAT--AGTGGCCATAT-CCTAGACAG--GCTTTTGACCATCATTTGGAATATACAGAACTTTGACTTTGGTTACTGGGAAAGAAAT-CAAAA--CAAAGCAAACTTGTT-ACAA-TA-T-ATGGAACG-GC---TTGGTCTCA-T-TGCAGTTGGTACAGACACACT--TTACATCCCGT-GTATGAACAAA-AGG-ACCTTT-GGTATCGAGG-AAGAGAAC-T-TTC-TCCAA-TCTATTCAAAGAAAAACATCGGTATTGGTCTTCCGATTTCATTTTC---TGCCATA-CTTC-TTTT----ATTT---TCG-TCTTATTGTTG--CT---TGTTTGAC--GAAAA--------------------CCAA---TGGT-C---AATGG-ATCG-T-TAT--GAAA-GACA-ATGGAC---TTTG--------CCTC--TA----CA---AAAATGTCGCTTGTTTT--GTCTTCAA-GGA-ACATTCCGTA---GCGTT-AGC-GGTGGATAGATATTCAATTCAAC-TTCAGGTT--TTTCA--GCC-CA-GCC-AA-GTATCAAT--CGCG-AAGGATGTCACA-CTAGAA-ATT--CGTGACA---ACATTGAAC-GATTACTGAATGGTCTCAC--AAGTAATT-TTCATAAGAAAGTTATA----TA-CACTGTAGGATATCAA-TGTTCAAT-GCAAGAAGTGTTTC-GAGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----GG-G--AATAATGACTTGTC---CAG-AACA--TGGAATGATTAACCATCATCCCTTGAGTGAATCTGCTCTCTTAGGTTATTGGAA-ACAGG-----TA-----ACTTC--ATC-TATACG-------TGTT-TT--ATAATTTATCCTTTATTT----C-AAGAG-T--AAATTATGCACAATGGCCATATAAACATTTC-ATTCACATTGTTTCAGTTT
gi|10 : ttTTTCATTTTTAATTGCCATAACTTT-TTTTCCATACTTATCCCGCTCTTAT-GTTGGCCTCTGTGCTAGACCGGAAAAAATACATTTATATATTGGTGCCG----TGGA-GCCGAATCG-TGCC-T-T-T--GGAATGACATATGGACGCCTTTGCTCTGGCATTTC--TTAGCACAGAGAAACCTTCGCTTGTTTTCCGTCTATAATATGTACATGTTGTATGAGCACTTGGCATGTGAATAGATATTCAATTCAGCT--CAGGTTCTTTTCAAAGCCTCA-G-CCAACGGAT-AAT--CGTGAAAG-ATGTCACA-CTAGAACATC--CGTGATAGATATATTGAAATGATTGCTGAATGG-CTCA----AGTAATTGTTCACAAGAAA-TAATGGGTGTAACAATGTAAGGTATCAACTGTT-AAA-GCAG-AGGTGTTTCCGAGAGCACGCATGACTCCCGCTTGTTCTAAAGTTAGGGAAGAGAACTAGAAAATTTCTATGGAGGAACTGTGAGAG--AGACAT-ATCTGTCTGTCAGCAACGGGTGGAATGTTC-ATTATCataatgataatatttcttttattcaggatgtcctagtcgaagtaagaggtaagtctcttcatttacgatattgattaactgagcacagtgattacaaataattcat
gi|11 : cCTAACATTGTTCAATGACATTGGCGTTATTCT----CTTCCAC---AC-TT--C-CT--CTGAT--TCCATTA-TTCTTGATGTTCAG-TGGT-TT-GT-GAATGCCTTCAAA---CACATTATAACAG-ATGA--AGAGCATG
gi|12 : aactgcaCCTA-CAGACTGGGCATTGT-CTGAAATA-AT-TCTCA-G-A----GAA--CACAAAAGTC--AAG--GAGAA--AG-A--ATGATATCG--GTTA-CAG--AA-TT-TGAAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CACAC-AAATGAGGGATA-T-CCTAAAGTTCTACCATGATATTGGCGTACTACTA-TACTTTGACGAGAG-TT--CTCTAGCCGAA--ACAGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGGGATATTGTTGATAGC-AACCGC-GATTGGC----TTTCCTTTT-ACAAA--AGTGGTCACAT-CCTAGACAG--ACTTTTGACCACTATTTGGAATAGTCGGAACTTTGAAATTAGTCACTGGGAAAGCAAT-CAAAA--CAAAGCAAACTTGTT-GCAA-CA-T-ATGCAGCG-AC---TTGcaatgagtgatatagaggacaaacatttcaatgaatggatgaagttcaccgagaatggaattttgccaaagaacctagtgaaagcaatctggaaaggaccagagttattcactgagcacacagaagatctaatcattcacatgatcagacttgggatgattgctgaaatggaagagggagaaacattttatgtcccttgcatgaacaaacaaaagtatgacaaggctgtcttaaacaactgtacttgttcttccactgtttgcttcatgtttgaatatctgccattggtgattttccaccgcttagttgctacctgcatgacaaag
gi|13 : taT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----ACA--GAAAATGAG-A--ATGACATCG--GTTG-CAA--AAATT-TCAA-AGAAGTGTT----T-TGGTGAAAACA-AAGATAAGTA--TTCAC-AAATAAAGGATA-T-CCTAAAGTTATACCATGACATAGGCTTGATACTA-CACTTTGACGAGAG-TT--CTCTTGCCGAT--TCTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TGATTCCTTCAAG---AACATAATAACTG-ATCC--AAACCACGTCAGGGATATTGTTGATAAC-AATCGT-GATTGGT----TTTCCTTTT-ACAAA--AATGGTCATAT-CCGCGACAG--GCTTTTGAAAACAATTTGGAACAGACAGCACTTTACAAT
gi|14 : TTCATTTTC---TGCCATA-CTTC-ATTT----TTTT---TCG-GCTGCTCGTGG-CCT----GTTTGAC--GAAGA--------------------CCAACAGTGGA-G---AATGG-GCCA-T-TCT--GGAA-GACA-AAGGGC---TTCG--------TTTG--TT----CA---AAAACGTGGCGTGTTTT--CTCTAaaa
gi|15 : GAGAA--AGAAA---TTTATGG--AAA-----AC-G--AGAAATTTCTTGTC---CAG-AACA--TGGAATGTTCAATTATCATATTCTGACTGAGTCCGCTCTTATAGGCTACTGGAA-ACAGG-----TA-----TATTC--ATC-CTTAGG-------TGTT-TG--A-AATTTcnggtcattata
gi|16 : --ACTG--G-TTACTGATGTC-AA-TGGT-TT-GTCTGATTCTTTCAAGTTTATCAT-GTCAGGG-A-CA--AAATCATGTCCGAGATGTTGGCGGAAACTGACAAG-GATTGGCAAA-TTTCc
gi|17 : cagaatcTTG--------TCTC--TA----CA---AAAATGTTGCTTGTTTT--GTATATAA-GCG-ACATGCTGTA---GCGCT-GGC-TGTGCATAGATATTCAATTCAGA-TTCAGGTT--TTCCaaaccgatgcaggatatc
gi|18 : AAAG-CAAAA--CA--GCAGCGTTGTTTGCAAATAAT-ATGGC-CG-GCCCTTTGGCTTCA-T-CGCAGTTGGTACAGACACACA--TTACA
gi|19 : GTTTAAA-ATT--AT-ACATGTTT---CTTGTACA-TTTC--CTA--TAAACGACTG-A-TATTTA----T--ATTGC-AGGACTCCAACATGTT
gi|2 : atTGCTT---TTTGTA-AATTTC--ATA--CAAATTTCTG-A-TATTTA----C--ATTGT-AGGATTCTAACATGTTG--TA-CAACAGCATACTGGATTATCTAAAAGATGATAAGCAC--CTGAAGCCGCACCTAAGTAG---AAAACGATGCTTCGTTCTGGGTTTTAAG-TC-AGAT-GGTTCATTTT-TC-CAGGACGCACTTTCTGAA-CTAGAGAA-GTGCATAGTTTCATTTGCTAAAGAAGAGAGGTGGAAAGAGACAA-TTCCTA-CAGACTGGGCAGTGT-CTGAAGTC-GT-ACTCA-G-G----GAA--CTCAGAGG----AAA--GAAAA--AG-AGAATGATGTCG--GTTG-CAC--AA-TTATCG-CAGAAATGTT----T-TGGTACAATCC-AGGAGAAATA--CGCAC-AAATGAAAGATA-T-CATAAAGCTCTACCATGATATAGGCGTTATACTA-CACTTTGAGGAGAG-TT--CTCTTGCCGAA--ACTGTCA-TCATTGACATCAAG-TGGT-TT-GT-TGATTGCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATTATTGATAAC-AACCGT-GATTGGC----TTTCCTTTT-ACAGA--AGCGGTCATAT-CCTAGACAG--ACTTTTGACCACTATTTGGGATAGTCAGCTCTTTGAAGT
gi|2 : AGAAAT-CAGAG--CAAAACAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTCA-T-CGCAGTTGGTACAGACACGCA--TTACATCCCCT-GTATGAACAAG-TTG-ACCTTT-GGTAGCAAGG-AAGAGAGC-T-TT-GTTCG-CTCTATCAAAAGTAAAACATCGGTATTGGTCTTTCGATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-TCTTATTGTTG-CCT----GTATGAC--GAAAA--------------------CCAA---TCGT-G---AATGG-ATCG-T-T-T--TGAACAACA-ATGGAC---TTTG--------TCTC--TT----CA---AAAATGTCGCTTGTTTT--GTCTATAA-GCG-ACATGTTGTA---GCGTT-GGC-TGTGAATAAATATTCAATTCAGATT-CAGGTT--TTTCA--GCC-CA-GCC-AA-ACGCCAAT--CGC-AAAAGATGTCACA-CTAGAG-ATC--CGTGACA---ATATTGAAA-AATTGCTGAATGATCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CACTGTGGGGTATCAA-TGTTCAAA-GCAGGAAGTGTTCA-GAGAACATG-ATGACT-------GTT------TTATCAAAGAGAC--TGAAA---TTTATAG--GAA-----AG-G--GGAAATTACTTGTC---CAG-AACA--TGGGATGTTCAATCATCACACTCTGAGTGAATCCGCTCTTTTAGGCTATTGGAA-ACAGG-----TA-----TCTTA--ATC-CGGAAG-------TGTT-TA--ATAGTTGAT------------------AA-T--TTATTATTTCAAATGACAATGTATAC-ATACAATGCACACCGTTATAGTTTggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattagaaatcagagcaaaacaaatttgttgcaatatatgcagcggcttggtctcatcgcagttggtacagacacgcattacatcccctgtatgaacaagttgacctttggtagcaaggaagagagctttgttcgctctatcaaaagtaaaacatcggtattggtctttcgatttcattttctgccatatttcttttatttccgtcttattgttgcctgtatgacgaaaaccaatcgtgaatggatcgttttgaacaacaatggactttgtctcttcaaaaatgtcgcttgttttgtctataagcgacatgttgtagcgttggctgtgaataaatattcaattcagattcaggtttttcagcccagccaaacgccaatcgcaaaagatgtcacactagagatccgtgacaatattgaaaaattgctgaatgatctcacaagtaactttcacaagaaagtgatgtacactgtggggtatcaatgttcaaagcaggaagtgttcagagaacatgatgactgttttatcaaagagactgaaatttataggaaaggggaaattacttgtccagaacatgggatgttcaatcatcacactctgagtgaatccgctcttttaggctattggaaacaggtatcttaatccggaagtgtttaatagttgataatttattatttcaaatgacaatgtatacatacaatgcacaccgttatagttttattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|3 : tgctttttgtaaatttcatacaaatttctgatatttacattgtaggattctaacatgttgtacaacagcatactggattatctaaaagatgataagcacctgaagccgcacctaagtagaaaacgatgcttcgttctgggttttaagtcagatggttcatttttccaggacgcactttctgaactagagaagtgcatagtttcatttgctaaagaagagaggtggaaagagacaattcctacagactgggcagtgtctgaagtcgtactcagggaactcagaggaaagaaaaagagaatgatgtcggttgcacaattatcgcagaaatgttttggtacaatccaggagaaatacgcacaaatgaaagatatcataaagctctaccatgatataggcgttatactacactttgaggagagttctcttgccgaaactgtcatcattgacatcaagtggtttgttgattgctttaagaacataataactgatccaaaccatgtcagagatattattgataacaaccgtgattggctttccttttacagaagcggtcatatcctagacagacttttgaccactatttgggatagtcagctctttgaagtggatgaggtgtttcatgaaatggatatcttagatattgaaatgcttcttagtgggaatcccttgattTTGTA--ATTTT--CTAAATAAAATTTCG-A-TGCTT---------TT-T-AGGATCGTGATACGCTG--TA-CTACAACATACTGGATTGCATTCAGGACGACAAACAT--CTGAAGCAACACTTAGCAAG---AGAGCGATGCTTTGTTCTTGGTTTTAAA-TC-TGAT-GATTCATCAT-TC-GAGGACACGCTTTTTGAA-TTAGAGAA-GTGCATAGTTTCGATTGCTATGCAAGACAGATGGAAGGAATCCA-TTCCTA-CGGACTGGGCACTGA-CTGAGGTC-GT-ACTCA-G-A----AAA--CTCAGAGAAC--AAA--AAAAG--AG-A--ATGATATCA--GTTA-CAG--AA-TTATCGAG-GAAATGTT----T-TGATAAAAACA-AAGAAAAATA--TACAC-AGATCAACGACA-T-TCTAAAATTTTACCATGATATAGGCGCTATCCTA-CACTTTGACGAGAG-TT--CTCTTGCCGAC--ATTGTCA-TCGTTGACATCCAG-TGGT-TT-GT-TGATTGCTTCAAG---AACATAATAACCG-ATCC--AAACCATGCCAGGGAGCTTGTCCACAAC-AAAGGC-GAATGGT----TAGCGTTTA-ACGAA--AACGGTCATAT-ACAAGACAG--TCTCTTGACCAATATTTGGAGCAGTCGACAGTTTGAAATTAATT-CCG---ATGACA---AAAA--C------AATCTGTT-AAAA-TA-C-ATGGAACG-TC---TTGGTCTTA-TCTATA-TTGGCAGAGAGGCACA--TTTTATCCCTT-GCATGAACAAG-CGG-ACCTTC-ACGACCGAAC-AAAAGAACAA-ATTG-CAAACTT--TCCCAAGTCAAACGTCTGTCCTGGTCTTCCGGTTTCCATTTC---TGCCATA-TTTC-ATTT----ATTT---CCG-TCTGATTGTTG--CT---TGTCTGAC--AAAGA--------------------CCAA---TGGA-G---AATGGAG--A-T-T-TCCAAAA-GACA-AAGAA-----TTG--------TCTTTATA----CA---AAAACCTAGCGTGCTTT--CTCTGTAA-GAG-CCACACTGTA---GTCCT-TGC-TGTCAATAAATATTCAGTTCAGC-TTCAGGTT--TTTCA--CCC-CA-G-C-AATGTTTCAAT--C-CCACAAACTGTTACA-TTGGAA-ATC--CGTGCTG---ATATTGAAA-AGTTACTGAGGGGTCTCAC--CAGTAACT-TTCACAAAGAAATCATG----TA-CACTGTAGGATATCAA-TGCTCACA-GCAGGATGTGTTTC-GTGAACATG-ATGATT-------GTT------TCGTGGAAGAAAA--AGATA---TTCAGGG--GAA-----AG-GCAAGCAG--ACTTGCC---CAA-TCCA--CGAGATGGCTAATTTCCATACCCTGAATGAATCAGATCTCCTTCATCATTGGAA-TAAGG-----TATATTGTTTTT--A---GATAGA-------TGTTATCCGATACATCAT------TT--------A-AGAA--ACATTA-CTCTTAT--CAAGTTATAC---CT-ATACACATtattttctttttccatagaatgtacaagtgataggtaagtatctttatttaagatcca
gi|4 : atttttgatATTCT--CTC--TAAGTTT-TGCA-TATTT-----TCGATTTT-AGAATGCCAACACGCTC--TA-CTACAGTATACTGGATTACATACAGGATGACAAAGAG--CTGAGGTCACACTTATCCAG---GGAACACTGCTTCGTTATAGGATTTAAG-TC-GGAT-GGTACAGCAT-TC-CAAGACACGCTGTCTGAA-TTAGAGAA-GTGTATTGTATCTATTGCTAGACAAGACAGATGGAAAGAATCCA-TTCCTA-TTGATTGGGCACTGG-CTGAAAGC-GT-ACTCA-G-A----GAT--CTTAGAGG----AAA--GAAAA--AG-AGAATGGCGTCG--GTTG-AAG--AC-TTATC-ATGGCAATGTT----T-TGGTCAAATCA-AAGAAAAATG--CTCAC-AAATCAGCGATA-T-CCTGAAGTTTTACCATGAAATAGGCATTATCCTA-CACTTTCCTGAGAG-TT--CGCTTGCCCAA--ACTGTCA-TCATTGACATCCAG-TGGT-TT-GT-TAATGCCTTCAAG---AACATAATAACGG-ATCC--AAACCACGTCAGAGAATTTGTTATCAAC-CACCGC-GAATGGT----TGGATTTTA-ACAAA--AACGGCCATAT-TCAAGACAG--TCTTTTGACAAAGATTTGGAGTACTGGGGACTTTGAAA----TCGATAGGGAGG---------A--CAAAAGAGACTTGCT-ACAA-TA-C-ATGGAACG-CC---TTGGTCTCA-T-TTTTGTTGGAAAGAAGGCACA--TTACATTCCGT-GTATGAACAAA-CAG-ACATTT-GCTGTTGAAC-AACAGAAA-GATTTG--CAATCATTTCC-AAGTCAAACATCAGTATTGGTCTTCCGATTTCCTTTTC---TGCCATA-CTTC-TTTT----ATTT---CCG-TCTGATTGTTG-CA----TGTTTGAC--ACAAA--------------------CTGG---TGGA-A---ACTGG-GTCA-TCC-T--GGAA-GACG-ATGGAC---TTTG--------TTTG--TT----TA---AAGACTTGGCTTGCTTT--GTCTTTAA-AAA-TCATACAGTA---GCTTT-GTC-TGTGAACAAATATTCAATTCAGC-TTCAGGTT--TTTCA--TTC-CA-G-CAAA-GGTTCAATTCCACAAA---TTGTTACA-TTGGAA-ATC--CGTGATG---ATATCGAAC-GATTACTGAAGGGTCTCAC--CAGTAATT-TTCACAAAAAAATCATG----TA-CACTGTTGGATACCAA-TGCTCAAA-ACAGGAAGTGTTCA-TTGAACACG-ATGACT-------GCT------TTGTTGAAAAGAA--AGAAA---TCCACGG--GAA-----AG-G--AAGAATCACTTGCC---CAA-GACA--TGGAATGCGCAATCGCCACATCCTGGATGAATCAACTATCCTATTTCATTGG-A-ATAGGGTATTTA-----TTTTC--A---AATACG-------AATT-TC--CTATGTTAT------TAT----C-TA-TA-TCAACATCATTTtagtctaatcaattacaatttccatgtttcttttaacaggatgttctaggaaaaccaacaagtgagtaactataggaattgtatgaaataatatattatattagtttcaaaagtgtaattgcagttta
gi|5 : tgtttgcaaatgccttacctttatctttgCTCCTC-A-TATTT-----T--GTTTT-AGAGCTCCCACAAGCTC--TA-CGAGAACATACTGGATTACCTAAAGCACGACCAGCAT--CTCAAGAAACATTTGGCCAG---GGAACGATGTTTCGTTGTAGGGTTTAAG-TC-GGAT-GGTTCATCAT-TCGCAG-ATGCACTCTCTGGC-CTTGAGGA-ACGCATCGTTTCGATTGCAAACCAACCTAGATGGACGGAATCCA-TTCCAG-GGGATTGGGTAACTT-TTGAAGTG-GT-ACTTA-G-A----CAA--CTCA-AGG-A--AGATGGAAAG--AA-A--AT--TGTCCCTGTTA-AAA--CA-TTGTC-ACAGCTATGTT----T-TGGTGACAACA-AAGAAAAATC--CAAAC-AAATCAGCGATG-T-CCTGAGATTTTACCATGATATAGGCGTTATACTT-CACTTTGACGCAGG-TT--TTCTATCCGAA--AATGTCA-TTCTTGACATCCAA-TGGT-TT-GT-TGATTCTTTTAAG---AATATTATCACCG-ATCC--AAACCATTTTGTGGAGCTGGTTGAGAAC-AACGAT-GATTGGC----GTGCTTTTA-ACGAC--AACGGGCACATATCT-GACGA--TCTTTTGACGAAGATTTGGACAAGTCAGGAATTTAGAATCA--------------AAC-CAGATGTCAAAGTAAGCTTGTT-GCAA-TA-C-ATGGAACG-TC---TTGGTCTCA-T-TTACGCCGGTCGAGAGGCGCA--TTATATTCCGT-GCATGAACAAG-TTG-ACCTTT-GGTAGCAATG-AAGAGGAA-TATCTGC---GTTCCATTCAAAATAAAACATCAGTTTTGGTCTTCCGATTTCAATTTC---TGCCATA-CTTC-ATTT----TTTT---CCG-GCTGATCGTTG-CCT----GTTTGAC--GAATA--------------------CCAACAATGGA-G---AATGG-GACA-T-TCT--GGAA-GACA-AAGGAC---TTCG--------TTTG--TT----CA---AAAACGTCGCGTGTTTT--CTCTTTAG-ATG-TCATACAGTA---ATTCT-GGC-TGTACACAAACATTCAATTCAGCTT-CAGATC--TTCCA--GCC-TA-G-C-AATGACTCAAT--CAAGAA-GGATGTTACT-CTGAAA-GTT--CGTGACG---ATGTTGAAA-GATTACTGAAAGAACTGACTGAA--AACT-TTCACAAGAAAATCGTG----TA-TACTGCAGGATATCAA-TGTTCAAATACAGCAG--GTTTC-ATAGATATG-ATGACT-------G-C------TTGTCTGAGAAGA--AAAAA---TTCGT-G--GAA-----AG-G--AAAACTCCCATGTC---CGA-AACA--TGGAATGCTAAATCATCACGAACTGAAGGAGTCAACTCTTCTATATCATTGGAATGC-GGTAT--TA-----TTTTCTTATCAAACAAA-------AAAT-CC--AT-ATTTAT------TTTGTTAT-CA-AG-A--ACAAACTTTC--ATTACAATtttctcattttcgtatataggtataaagaattgtatacatcattttcagttaataatgatgataattttcttttaactaggatgtcctggccgtaccaaccggtgagtaag
gi|6 : ATAGCTTGAG-ATA--AT-CTGTGTTT---C--GTAGAATTTC--CTC--TCAACTTCTG-A-TATTTA----C--ATTAC-AGGACTCCAACACGTTA--TA-CAACAGCATACTGGATTATCTCCAATTCGACAGACAC--CTGAAAACGCACCTAGATAG---AAAACGCTGCTTTGTTCTAGGTTTTAGG-TC-AGAT-GGTTCCTTTT-TT-CAGGACACGCTTTCTGAA-CTAGAGAA-GTGCATAGTTTCAGTTGCTAAAGAAGATAGGTGGAAGGAAACCA-TTCCTA-CAGACTGGGCATTGT-CTGAAATT-GT-ACTCA-G-A----GAA--CTCAAAGGTC--AAG--GAGAA--AG-A--ATGGTGTCG--GTTA-CAG--AA-TT-TAGAGAGAGTTGTT----T-TGGGGAAAACG-AAGAGAAATA--CGCAC-AAATGAAGGATA-T-CCTAAAGTTCTACCACGATATAGGCGTGCTACTA-CACTTTGATGAAAG-TT--CTCTAGCTGAA--ACTGTCA-TCATTAACATCCAA-TGGT-TT-GT-TGATTCCTTTAAG---AACATAATAACTG-ATCC--AAACCATGTCAGAGATATCGTTGATAAC-AACCGC-GACTGGG----TTTCCTTTT-ACAAA--AGTGGTCACAT-CCTAGACAG--GCTTTTGACGACTATTTGGAGTATTCGGAACTTTGAAATCAGTCGCTGGGAAAGAAAT-CAAAA--CAAAGCAAATTTGTT-GCAA-TA-T-ATGCAGCG-GC---TTGGTCTTA-T-TGCAGTTGGTACATACGCACA--TTACATTCCGT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AAGAGAAC-T-TTTGTTCAACTCCATCCAAAATAAAACATCGGTATTGGTCTTTCGATTTCAATTTC---TGCCATA-CTTCTTTTT----ATTT---CCG-ACTTATTGGTG-CTT---TGTTTGAC--AAAAA--------------------CCAA---TGGGCG---AATGG-ATCG-T-T-T--GGAG-GACA-ATGGAC---TTTG--------TCTC--TA----CA---AAA--TTTGCTTG-TTT--GTCTATAA-GCG-ACACGCTGT----GCGCG-GGC-TGTGAATAGATATTCAATTCAGA--TCAGG-T--TTTCA--GCC-CA-G-C-AG-GTTTTAATA-TGCAAAAGGATGTGACAGCTAGAA-ATCAGCGTGACA---ATATTGAGA-GATTACTGAATGGTCTAAC--AAAAAACT-TTCACAAGAAAGTGATG----TA-CAATGTCGGATATCAA-TGCTCAAG-GCAGGAAGTGTTTC-GCGAACACG-ATGACT-------GTT------TTATTGAAGAGAA--AGACA---TTTATGG--GAA-----AG-G--AAAAATTACTTGTC---CAA-AACA--TGGAATGATTAATCATCATATCCTGAGTGAATCCGCTCTTTTGGTCTATTGGAA-ACAGG-----TA-----TCTTT--ATC-AATAGG-------CGTT-CC--ATCATTTCT------TTT----CACA-AG-T--ACATTATTTCTAATGACAATGTATACAATGC-ATGCATATAATTTTAGTTTccattatttagaacgatgaatgatattttgccgctactaatgtgaatgttctttttttaattaggatgttcgagtggaaccaacgggtgagtaaat
gi|7 : GAACGGAACGCAAAA--TGAATCG--CTTGCT-ACAA-TA-T-ATGCAACG-GC---TTGGTCTCA-T-TGCAGTTGGTAAAAACAAACA--TTACATCCCCT-GTATGAACAAG-ATG-ACCTTT-GGTATCAAGG-AACAGATC-T-TTT-TTCAATCTTA-CCAAAGTAAAACATCGGTATTGGTCTTTCAATTTCATTTTC---TGCCATA-TTTC-TTTT----ATTT---CCG-CCTTATTGTTG-C-T---TGTTTGAC--GAAAA--------------------CTAA---AAGC-A---AATGG-GCCGTT-T-T--GAAA-GACA-ATGGAC---TTTG--------TCTT--TA----CA---AAGACCTCGCTTGTTTT--GTTTATAA-GCG-ACATGTTGTA---GCGCT-GGC-TGTGCATAGATGTTCAATTCAGC-TTCAGGTC--TTTCA--GCC-CAGG-C-AA-GGGTCAAT--CATGAAA-GATGTCACA-TTAGAA-ATC--CGTGACG---ACATTGAAA-TGTTACTGAATGGTCTCAC--AAGTAACT-TTCACAAGAAAGTGATG----TA-CAATGTAGGATATCAA-TGCTCAAT-GCAGGAAGTGTTTC-GAGAACATG-ATGCCT-------ATT------TTATCAAAGAGAA--AGGAA---TTTACGG--GAA-----AG-G--AGAAATCACCTGTC---CAG-AACA--TGGAATGTTCAATCATCATATCCTGAGCGAATCCGCTCTGTTAGGCTATTGGAA-ACAGG-----TA-----TCGTC--ATT-CTTTGGTTTTTGACAGT-TC--ATCATTTAT------TTT----T-CA-GG-T--ACTTTATTTCAAATGACAATGTATGCAATCC-ATGCAAATCATCTTAGTTT
gi|8 : ccttgggtgataATGGCTTTGAGATGGAATACTTTGTTTGCGCTTA-GGAATTTCACCTC--TCAACTTCTG-AGTATTTAATTTT--ACTACCAGGACTCCAACACGTTAGTTAACAACAGCATACTGGATTATCTCCAATTCGACAGGCACACCTGAAAACGCACCTAGATAAGAAAGAACGCTGCTTTGTTCTAGGTTTTAGGGTCAGGATTGGTTCCTTTTCTC-GAGGACACGCTTTCTGAAACTAGAGAAAGTGCA-AGTTTCAGTTGCTAAAGAAGATAG-TGGAAGGAAACCAGTTCCTATCAGACTGGGCATTGTGCTGAAATT-GTCACTCA-GCA----GAAACTTCAAAGG-TCTAAG--GAGAA--AGGA--ATGTGGTCG---TTA-CAGG-AA-TT-TAGAGAG---TGTG----TGTGGGGCAAACGGAAGAGAAATATACGCACCAAATGAAGGATAATACCTAAAGTTCTACCACGATATAGGCGTGCTACTACCACTTTGATGAAAGTTT--CTCTAGCTGAA--ACTGTCATTCATTAACATCCAACTGGTGTTGGT-TGATTCCTT-AAG---AACATAATAACTGCATCCAAAAACCATGTCA-AGATATCGTTGATAAC-AACCGCAGACGGG------TTCCTTTTGACAAAATATCGGTCACAT--CTAGACAGGCGCTTTTGACCACTATTTGGGGTATTC-GAACTTTGAAATCAG-CGCTGGGAAAGACAT-C-AAA--CAAAGCAAA--TGTT-GCAAGTA-TAATGCAGCGAGC---TTGGTCGTATT-TGCAGTTGGTACATACGCACACCTTACATTCCGTAGTATGAACAAGACTGCACCTTGAGGT-TCAAGGAAAGAGAAC-T-TT--TCCAAacaatgttttccttttttctacaggatgtcaaagtaacaggtatgaatctttatttaagatcccgattaaatgaacattgtttcaaaaaaatacattt
gi|9 : cTCCGAC-CTAGAAAA-CTGTATTGTTTCTATCGCGAAAGAAGACAAATGGAAAGAATCTA-TTCCCA-AGGCATGGTCATT-T-ATGGAATTGGT-GTTCATG-AATTTGAA--AAAAGGGG-TTAAAA--GTGAA--AG-A--AT--TTTTG--ACCAGCAGGTAA-TT-TC--AAGAATTATTTCTAT-CAGCGAGCTCG-AAGAGAGATA--tcca
gi|9 : ggataaggacgagttttatgataaccttttggatttgctaccaaaagatgatgcagagcttaaaaagcacttttgtaggagtagatgtttctttgtcggcttaccttgtgatgaaaacagtttcttagatcctttgATGACATCGGTATGATTCTT-TACTTCAATGAAAA-TGGACTCT--CAGAATCACTG--G-TTACTGATGTCCAA-TGGT-TT-GT-TGATTCTTTCAAA---TTTATCATATCAG-ACAG--AAAGCATGTCAGAGATTTAG-CGAAAACTGACCAG-GACTGGCAATATTTCCttggttggattttgaagtagttcgtgtggaggttcaagacgctctgcgttttttcaatgacatcggtatgattctttacttcaatgaaaatggactctcagaatcactggttactgatgtccaatggtttgttgattctttcaaatttatcatatcagacagaaagcatgtcagagatttagcgaaaactgaccaggactggcaatatttccaccaatcaggatatct
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): GGATAAGGACGAATTTTATGATAACCTTTTGGATTTGCTACC