lowQualScore : 3 66666666666666666666666666666666666666666 22 111 2222 11 1111 1111111111 444444444 1111 7777777777777777777777777777 11111 111 22222222 444444444 11 11111111 111111 333333333 1111111 1 222222222222 1111 1 1111111 666666666666666666666666666666666 1 1111 111 1111 11111 111111111 111 22222222222 1111111 11111111111111111 111111 1 111111111 22222 1 222 11111 1 11111111
lowQualScore : 6 2 4 7 99999999999999999999999999999999999999999 3 3 6 3 7777 88 3 3 3 000 4 33 2 2 2 2222 2 2 9 33 0 22 2 2 66666 2 0000 2 33 4444444444 3 2 5555 111111111 5555 1111 2 4444444444444444444444444444 2 2 66666 111 5 3 9 6666 6666 3 3 3 00000000 0 3 55 555555555 555 3 88 555 6666 6666 3 33 0 555 11111111 77 7777 222222 555 3 999999999 0000000 0 3 555 3 4 000000000000 9999 33 1111 2 3 4 55 2222222 666 55 222222222222222222222222222222222 55 99999 3 6666 2 4 2 2 2 2 33 2 1111 888 4 44 2 2 2222 88888 555 222222222 000 1 555 3 2 3 44 2 66666666666 2 1111111 2 44444444444444444 2 8 111111 9999999 5 2 2 2 888 4 2 999999999 1 2 2 1 2 2 3 2 3 33333 2 0 2 6 1 2 111 2 2 88 1 66 2 33 99999 3 3 44 1 44 3 4 3 3 7 99999999 3 3 3 44 3 1
lowQualScore : . . . . ......................................... . . . . .... .. . . . ... . .. . . . .... . . . .. . .. . . ..... . .... . .. .......... . . .... ......... .... .... . ............................ . . ..... ... . . . .... .... . . . ........ . . .. ......... ... . .. ... .... .... . .. . ... ........ .. .... ...... ... . ......... ....... . . ... . . ............ .... .. .... . . . .. ....... ... .. ................................. .. ..... . .... . . . . . . .. . .... ... . .. . . .... ..... ... ......... ... . ... . . . .. . ........... . ....... . ................. . . ...... ....... . . . . ... . . ......... . . . . . . . . . ..... . . . . . . ... . . .. . .. . .. ..... . . .. . .. . . . . . ........ . . . .. . .
lowQualScore : 0 8 0 8 33333333333333333333333333333333333333333 6 6 8 6 7777 00 6 6 6 222 5 99 9 9 9 4444 9 9 0 99 1 99 7 7 77777 7 2222 7 77 5555555555 5 7 7777 888888888 7777 3333 7 7777777777777777777777777777 7 7 00000 777 7 4 8 5555 5555 1 1 1 88888888 7 1 44 888888888 444 1 22 444 5555 5555 1 99 5 222 22222222 33 4444 222222 888 3 999999999 8888888 4 2 888 3 7 333333333333 1111 99 1111 7 6 1 00 5555555 444 00 555555555555555555555555555555555 00 11111 6 1111 9 9 9 9 9 9 77 7 1111 333 9 11 9 9 1111 11111 000 333333333 444 9 444 1 5 1 22 9 44444444444 7 1111111 7 55555555555555555 9 2 111111 3333333 7 9 9 9 999 4 5 555555555 9 5 5 9 5 5 5 5 6 22222 7 4 5 8 8 5 999 5 5 44 7 33 9 99 44444 3 1 22 2 22 9 0 1 1 5 99999999 3 0 3 66 7 5
consensus : TTCTGTAGATCACTTATTTT-T-CGCGAGTA--TT----T-N-ATT-C--GC-GT-T--TAACA-C-GGTCCGG-T-GTT-TA----TTC-GCGAA-TACAATAA-T-TCGC--GAGAATACAG--TTAAA-AA-T-AACTT-A--TATTTC-G-CGAA--TAGATC-CGCTCCT-GCAT-TTATG-----A-TCGT---A-ATGTC--A-C--------TACGT-G----TG---------TACGTCT----T----TGT-ATG---------------------TAC----C-G-TT-----ATTGA--ATTTA-TCGACCTATTCAAA----TGACCA----GTTTAT-ACCCAT-GC-TTGC------TACTG-GTA-ATT--N-CT---TGA---GT-AGTT---T----T----TAC-T-AATTGAT--TG--------AA--GACA---A----C-G---CC-TCAC------CGC-------TGTGCCT---CGT-GGCAATCGTAACGGCGT---GAGTTTAA--TTTG--T----TTGTTTGTAA-AGCGAT--TA------GCTTTA---TT--TA------A------T----A------A-------A--AGAA-----ACATATC----TGCAATAAT-TTTT-G-TAAGC-TT-ATT--T-TTT--NATGTTCTTCAAT--AAATATATG-TTC-G-GTT----ATA--TAGCA---GTTTT---------ATTTT--ATCTA---CA-TCGA-T--GTA-T-GAAG------A-AAT--A----CATCAA-TT--A-CT-A---------A-CTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGA-AA--TAA-ATTTGAG-ATTATCCGTA-AT--GGATT-TA-TTT--GCAAA--AAGTAGA-A--ATAA-ACG-CGA-GAT-A--TTTGAA--TTCGCGAACGA-C-CCGTC-TCGC-GAATTAACGC-GGA-AAT--AAATCTCTCGCGAATAATAA
Reference ( gi|2 ) : TCCTGTAGATCACTTATTTTAT-CGCGGGTA--TA----T-A-ATT-T--GC-GT-C--TAACA-C-G-CCTGG-T-GCT-TA----TTCTGCGAA-TACAATAA-T-TCGC--GAGAATATAG--TTAAA-AA-T-AACTT-T--TATTTC-G-CCAA--TAGATC-AGCTCCT-GCAT-TTATG-----A-TCGC---A-ATGTC--A-C--------TACGT-G----TGC--------TACGTCT----T----TGT-ATG---C-----------------TA-----C-G-TT-----ATTGA--TTTTA-TCGACCTATTGAAA----TGACCA----GTTTAT-ACCCAT-GC-TTCC------TACTG-GTA-ATT--T-CG---TGA---GT-AGAT---T----T----TAC-T-AATTGAT--TG--------AA--GACA---A----T-G---CC-TT-C------CGC-------TGTGCAT---CGT-GGCAATCGCATTGGCAT---GCGTTTAA--TTTG--T----TTGTTGGTAA-AGCAAT--TA------GCTTTA---TT--TA------A------T----A------A-------A--AGAA-----ACATATC----TGCAATAAT-TATT-G-TAAGC-TT-ATT--T-TTT--AATGTTCTTCAAG--AAATACATG-TTC-G-GTT----ATA--CAACA---GTTTT---------ATTTT--ATCTA---CA-TCAA-T--GTA-T-ACAG------A-AAT--G----CATCAA-TT--A-CT-A---------A-CTGTACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAACAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGTACACA-TATAAAAA-TA--TAA-ATTTGAG-ATTTTCTGTA-AT--TGATT-TA-TTT--GCAAA--AAGTAGA-A--ATAA-ATC-CGA-GAT-A--TTGGAA--TTTGCGAATGA-C-CTGTA-TCGC-TAATTAACGC-GAA-AAT--AAATCTCTTGCAAATAATAA
gi|6 : TTCTGTAGAT-ACTT-TTTT-T-CGCTAGTA--TT----T-T-CTT-T--CCCGT----TCACA-G-G-TC-GA-T-GTT-TC----TTC-GCGAA-TACTATAA-A-TCGA--GAGAATAGGT--TTAAACAA-T-GAGAT-TAATATTTC-G-CGAA--TACACC-AA-TACT-GTAC-GTATG-----ATTCTA---A-ATATT--A-CATTTAGTATACGT-G----TG---------TAAGCCT----T----CCT-------C-----------------TA-----C-GTTT-----TTTGGTTTTTTACTCAACCTATT
gi|25 : gTTCTGTAAATCACTTATTTT-T-CGCGAGTAC-TT----T-A-TTT-C--GC-AT-T--T-ATA-G-GATCCAG-T-GTT-TA----TTC-GAGAA-TTCAATAA-T-Ttataacgtatacaagaagttagcagctcgccgctcgtctcagggtctcttttaacggatatgagtggcaattagttgtggattgtttgtagcagcgattagcattatctaatatcctaaaaacagaaattgccacaatttatatcgttatcattcaaagtctgcaatatgtttgattatctggtatttcccataacgtacgaagaaactaacatatattactattctccataggtactgtaactaaaatggaatgctaaatttgaatagcgtttctggtctgaatcacttatacgagaaataaatttgagattgtttgcagtaatgtttgtattttggcaagagtaaataatagatacgagatactttgatttgcataggccgtttaaagaattaaacaaagaacaaaatcttgcaaatgaaaaag
gi|10 : CTGTAGATCACTTATTTT-T-CGCGGGTA--TT----T-T-ATT-TTCAC-GT-T--T-ACA-CTG-TCTGG-T-GTT-TA----T--------------------TCGC--GAGAACACAG--TTAAG-AA-T-AACTT-A--TATTTT-G-CGAA--TAGATC-CGCTCCT-GCAT-TTATG-----A-CCGT---A-ACGTC--A-----------A-GT-G----TG---------TACGTCT----T----TGT-ATG---------------------TAC----C-T-TT-----ATTGA--AGTTA-TTGACCTATTCAAA----TGACCA----ATTTAT-CCCCAT-GG-TCGC------TTTAG-GTA-ATT--A-CT---TGA---GT-AGTT---T----T----TAC-T-AATTGAT--TG--------AA--GAAA---A----C-G---CC-TCAC------CGC-------TAAGCCT---CGT-GGCAATCGCA-----AT---GAGTTTAA--ATAG--T----TTGTTTGTAA-AGCGAT--TA------CCTTTA---TT--T-------A------T----A------A-------A----AA-----ACATATC----TGCAATAAT-TTTT-G-TAAGC-TT-ATT--T-GTT--CATGTTCTTCAAT--AAATATATG-TTC-G-GTT----ATG--TAGTACTTATTTT---------ATGTTCCATGTA---CA-TCGA-T--GTA-T-GAGA------A-AAC--A----CACCTA-TT--A-CT-A---------A-CTGCACAGGTGCA------TT-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTCAATAGTG-------TTGT-TT-CTGGTGT-G-CAGTACA------AAAG-------------TGAG-ATTATCCGTG------GATT-TA-TTT--TCAAA--At
gi|1 : aCTGTAGATCACTTATTAT-T-CGCG---A--TAGATTT-A-ATT-C---C-GTGT--TGATT-C-G-CGAGG-TGGGT-CG----TTC-GCGAT-TTCAATGA-TCTCGC--GA
gi|7 : gtagttcacttaattttcgcgagtatttcattgcgcgttggtagggtgcggtgtttatttgcaaatatcataattcgaaaggatacagttaaaaataacgtatattttgcgaacacctctgctcgttctgattgttatatcattacacgtgttcgccttccattgtatgtaccgttattgattctctcgacctagtcagatgaccattttatacccatgcttgctactcgtacgtacctgagtaggttttgtgtattcaatgaattgttacctgtaattgtcgattgtcgttctataatcactttcataatcgtgtggtcttgtcatgagtttaatttgtgtgcttgtttgttcagcgattaactttattaataacgtttataaaaaaaaatcgacattaatttatgcatgctttttatttttcatgtttttcaatgcatttatcttcgattgttttgcagttttattttatctgcatcaatgtatgaagaaatacactgattacttaaatgcacatgcacatgaaatatgatggcattacaaaatgttgaatagtgtttctgttgtacggcacacatataaagaaataaatctaacattatccataatgaatttatttgcaaaaagtagaaatatagaCTGAAG-TCACTTATTTTATTCGCGAGTA--TT----T-TTATT-TTCAC-GG-T--TACCATC-GTCCCGG---GTTATA----TTC-ACGAAAGACAATAAAT-TCATCAAAAAATACAGAATTAAG-AA-T-AACTA-TA-TATTTCAG-CGAA--TAGATC-CGCTCCT-GCATGTTATG-----C-ACGT---A-ATGTCCAA-C--------TACAT-GAGTATG---------TACATCT----T----TTT-ATG-------------------------------------------------TA-CCG--TTATTGAAA----T------------TAT-ACC-AT-GC-TTTC------TAGTGAGTAGATC--TACT---TGA---GTTAGTTGTGT----T----TAC-T-AACTGATATTG--------AG--GACA---AAACGG-G---CC-TA-A------CGC-------TGTGCCT---CGTTGGCAATTCTAATGACTTT--GAGTTTA-----TGATT----TTGCTTGTAA-AGCGAT--TC------GCTCTA---TT--TA------A------TGTTTA------AT------A--AGAACATCAACATATC----TGCAATAAT-TTTT-G-TAAGGATT-ATT--T-TTTTCAA-GTTCTTCAAATAAAGTATATG-TTCAG-GTT----ATA--TAGCA---GTTTT---------ATTTC---TTTA---CA-TCGA-TCTGTA-T-G-AGTGAATAA-AAT--G------TCAA-TTCTATCT-A---------A-CTACACAGGTGCA------TG-------TAA-TAT-GAT-GGTGA-TG---ACGAAT-GTTGAATAGCAGGTTTT-TTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGA-AA--TAA-ATTTGAG-ATTATCCGTA-AT--GGATT-TATTTT--GCAAA--
gi|12 : aCTATAGATCTCTTATTTT---CACGAATA--TT----TTA-ATT-C--GC-GT-T--TA-CA-T-GGTCCGT-T-ATT-TA----ATC-GCTAA-TACAATAA-T-TTGC--GGGAATACAG--TTAAA-AA-T-AACAT-----ATTTC-G-CGAA--TAGATC-CGTTTCT-TCAT-TTATG-----A-TTAT---A-ATGTC--A-C--------TACAT-C----T-C--------TACGTCT----T----TGT-ATG---------------------TAC----C-A-TT-----ATTGA--ACTTA-TCGATTTATTCAAA----TGACCA----GTTGAT-ACCCAT-GC-TTGC------TATTT-GT--ATT--T-AAT--TGA---GT-AG-T---T----T----TAT-T-AACTAGT--TG--------AAT-TAT----A----C-G---CC-T---------CACCAATATATATGCCT---CGT-GGCAATCGTGATGGCAT---GCGTTTAT--TTTC--T----TT----GTAA-AGCAAT--TA------TCTTTA---TT--TAATGTTTA------T----A------A-------A--AGAA-----ACATA------TACAAT-AT-TTCT-A-TAA-C-TTAATT--T-TTT--CTTATTCTTCAAT--AAATATGTG-TTT-G-TTG----ATA--TAGCA---GTTTT---------ATTTT--ATTCA---CA-TCGA-T--GCA-T-GATG------G-AGT--A----CACCAA-TT--
gi|13 : ttaCTGTAGATCACTTATTTT-T-CACGAGTA--TT----T-T-ATT-TC-AC-GT-T--TA-CG-C-GGTCTAG-T-GTT-TA----TTC-GAGAA-TACAATAA-T-TCGG--GAGAACACCG--TCGAA-AA-T-AACTT-T--TATTTC-G-CGAA--TAGATC-CGCTCCT-GCAT-TTATG-----A-CCGT---A-ATGCC--A-----------A-GT-G----TG---------TACGTCT----T----TGT-ATG---------------------TAC----C-G-TT-----ATTGA--ATTTA-TCGACTTATTCAAA----CCGCCA----GTTGAT-ACCCAT-GT-TT-----------TA-GT--------------TGA---GT-AGTT---T----T----TAC-T-AATGCAT--TG--------AA--GAAA---A----C-G---CC-TCAC------GGC-------TGAGCCT---CGT-AGCAATCGTA-----AT---GAGTTTGA--ATAG--T----TTGTTTGTAA-AGCGAT--TA------TCTTTA---TT--T-------A------T-----------A-------A--AGAA-----ACATATC----TGCAATA----ATT-C-TAAGC----ATT--T-TTT--ct
gi|5 : ataCTGTGGATTACTTATTTT-T-CGCAAGTAA-TT----T-A-TTT-C--GC-GT-T--TA-CA-G-GGTCCAG-T-GTT-TA----TT-TGCGAA-TACAATAA-T-TTGC--AAT-ATATAG--TTAAA-AC-T-AGCTT-A--TATTTT-G--CAAGCT---TT-AGCATTT-ACAC-ATATG-----A-TCGT---A-ATATC--A-C--------TACCT-G----TG---------TACGCCTTCCAT----TGT-ATG---------------------TAC----C-G-TT-----ATTGA--TTCTA-TCGATCGAATCAAA----TGAACA----GTTTAC-ACCCAT-GC-TTGC------TGCTG-ATA-ATTA-T-TATT-TGA---TT-ATTT---T----T----TAC-T-TATCAAA--TG--------AA--GACC---A----C-G---CC-TCAT------CTT-------TGTCTCT---CAT-GGTAATCTTAACGGTGT---GAATTTA----TTA--T----TTATc
gi|26 : taTGTAGATCACTTGTTTTTT-CGCAAGTATTTAT---T-A-TTT-T--GC-GT-TTGTAGGA-T-G---TGGTT-GTT-TA----TTC-GCAAA-atttgcaataatttttgtaggcctatttttcatgttcttcaataaatatttcttcggttatagcagttttatcttatctacatcgatgtttgaagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatgttgaacagcatgttgctggtggacggcacaaatataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataaatgatatacagta
gi|1 : gtGTAGTTCACTTAATTT-T-CGCGAGTA--TT----T-C-ATTGC--GC-GT-TGGTAGGG-T-G-C--GG-T-GTT-TA----TT-TGCAAA-TATCATAA-T-TCGA--AAGGATACAG--TTAAA-AA-T-AACGT-A--TATTTT-G-CGAA--CACCTC-TGCTC---G----TTCTG-----A-TTGT---T-ATATC--A-T--------TACAC-G----TGT--------T-CGCCT----TCCATTGT-ATG---------------------TA-----CCG-TT-----ATTGA--TTCTC-TCGACCTAGTCAGA----TGACCA----TTTTAT-ACCCAT-GC-TTGC------TACTC-GTA-CGT--A-CC---TGA---GT-AGGT---T----TTGTGTAT-TCAATGAAT--TGTTACCTGTAATTGTCG---A----TTG---TCGTT-CTATAATCAC-------TTT-CATAATCGT-G----TGGTCTTGTCAT---GAGTTTAA--TTTG--TGTGCTTGTTTGTTC-AGCGAT--TA------ACTTTA---TTAATA------ACGTTTAT----A------A-------A--AAAA-----A---ATC----GACATTAAT-TTAT-G-CATGC-TT-TTTATT-TTT--CATGTTTTTCAAT--GCATTTATC-TTC-G-ATT----GTT--TTGCA---GTTTT---------ATTTT--ATCTG---CA-TCAA-T--GTA-T-GAAG------A-AAT--A----CACTGA-TT--A-CTTA---------A-ATGCACATGCACA------TG-------AAA-TAT-GAT-GGCAT-TA---CAAAAT-GTTGAATAG----------TGT-TT-CTGTTGT-A-CGGCACACA-TATAAAGA-AA--TAA-ATCTAAC-ATTATCCATA-AT--GAATT-TA-TTT--GCAAA--AAGTAGA-AATATAG-ATCGCGA-GATCA--TTGAAA---TCGCGAACGA-C-CCACC-TCGC-GAATCAACAC-GGA-ATT--AAATCTATCGCGAATAATAAattcat
gi|4 : TT-C--GC-GT-T--TA-CA-G-GGTCAGT-T-GTT-TAGTGTTTGTGTCAA-TACAATAA-T-CCTTT-GAATATATAG--TTAAG-AACT-AGCTTAG--TATTTT-GACCAA----------GCTTTTAGCAT-TTACACATATA-TTGCCGTACATATC--AAC--------TACCTTG----TG---------TAGACCT----TCAATTGTTATGTACC-----------------TA-----C-G-TT-----AT-GA--TTCTACTCGTCGAATCAAAA----TGAACA----GTT-AC-ACC-AT-GC-TTGC------TGCTG-ATA-ATTA-T-TAATTTGA---TT-ATTT---T----T----TAC-T-TA-TAAA--TG--------AA--GACC---A----T-G---CC-CT-CA-----TTT-------TGTCTCT---CAT-GGTAATCTTAACGGTGT---GAATTTA----TTA--T----TTATgtgatctacag
gi|3 : actacgtgaagctctatcttatttttcgacatagtcattctattCAATTA-T-TCGC--GAAAATACAG--TTTAA-AT-T-AACTT-A--TATTTT-G-CGAA--TTGATC-AGCTCCT-GCAT-TTATG-----A-TCGT---A-ATATC--A-T--------TGCTT-T----TG---------TACGTCT----T----TGT-ATA---TATATG------------TAT----C-G-TT-----ATTGA--TTTTA-TCGAC----TAAAACTAATGACAA----GTTTCTTACCCAT-GC-ATAA------TACTG-GT--------------------------T---T----T----TAC-G-TATCAGA--AG--------AA--GACGTGTA----C-GACCCC-CA-C------CGC-------TGTTATT---TGT-GGCA-TCATAACGGCGT---GAGTTTCA--TTTG--T----TTGTTTGCAA-AGCCAT--TATATGTAGATCTA---TC--TA------A------T----G------ATCAT---AGTAGAA-----AAATATC----TTCAATAAC-TTTT-G-TAAGC-TT-ACA--T-TTT--A-TGTTCTTCAAT--AAATATATA-TTC-T-GTT----ATA--TAGCA---GTATT---------ATTTT--ATTTG---CA-TCGT-T--GTA-T-G-AG------AGAAT--A----CATCGA-TT--A-CT-A---------A-CGGCACAGGTGCA------CA-------TAA-ATT-GTT-GGTGA-TG---AAAAAT-GTTGAACAGTG-------TTGT-TT-CTGGTAT-G-CGGTACACA-TATAGAGA--A--GGG-ATCTGAA-ATAATCCGCA-AT--GAATT-TA-TTT--GCAAA--AGCCAGA-G--ATGA-GAG-CGA-TAT-A--TTTGAC--TTCCCGAATGA-C-C-ATC-TCAC-GAATTAACGC-ACA-AAT--AAATCTCTCCCAAATAAatttgcaataattttttgtaggcttatttttcatttcttcataaatattttcttcggttatagcagtttattttctacatcgatgtttgagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatagttgaacagcatgttgctggtggacggccaaaataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataatatgatataca
gi|8 : taactgtcgaatcacttatttttcaacggtattgttatttttcaattacagtgtAATACAG--TTAAC-AA-G-AACTT-A--TATTTC-G-CGAA--TAGATC-CGCTCCT-GCAT-TCGTG-----A-TCGT---A-ATGTC--A-C--------TACAT-G----TG---------TACGTCT----T----TGT-ATG---TAGCTTT-----------TA-------A-TT-----ATTGA--ATTCA-TCGACTTATTCGAA----TGACCA----GTTTAT-ACCCATTGTATTGC------TATTG-GTA-TTT--A-CT---TGA---GT-AGTT---T----T----TAC-T-AACTGAT--TG--------AA--AACA---A----T-G---TC-TCAC------CGC-------TGTGCCT---TGT-GATAATTGTAATGGCAT---GAGTTTAA--TTTG--T----ATGTTTGTAA-AGCGAT--TA------GCTTTAATGTT--TAT-----A------T----A------------------GAA-----ACGTATCAGTCTGCAATAAT-TTTT-G-TTAGC-TT-ATT--T-TAT--CATGTTCTTCAAT--AAATATATG-TTT-G-GTTTAATATA--TAGCA---GTTA----------ATT----ATATA---CA-TCGA-T--GCA-T-GAGG------A-AAT--A----CATCAA-TT----CT-A---------A-CTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGTG-------TTTT-TTTCTGGTGT-G-CGGTACACA-TATAAAGA-AA--TAA-ATTTGAG-ATTATATGTA-AT--GGATT-TA-TTT--GGAAA--AAGTAGA-A--ATAA-ACG-CGA-TAT-A--TTTGAA--TTAGTGAACGA-C-CCGTC-TCGT-GAAT
gi|11 : AATACAG--TTAAA-A--T-AACTT-A--TATTTC-G-CTAT--TAAATC-CGCTCCT-GCAT-TCATG-----A-TCGT---A-ATGTC--A-C--------TACAT-G----TG---------TACGTCT----T----TGT-GTG---G-----------------AC-----C-G-TT-----ATTGA--ATTTA-TCGACTTATTCAAA----TGACCATGCAGTTTAT-ACCCAT-GC-TTGC------TATTG-GTA-ATT--A-CT---CGA---GT-ATTT---T----T----TAT-T-AACTGAT--TG--------AA--GACA---G----T-G---CC-TCAC------CGT-------TGTGCCT---CGT-GACAATCGTACTGACATTATGAGTTTAA--TTTG--T----TTGTTTATAA-AGCGAT--TA------GCTTCA---TT--TA------A------T----GTGTATGA-------A--AGAA-----ACAT--C----TGCAATAAG-TTTT-G-TTAGC-TT-ATT--T-TGT--CATGTTCTTCGAT--AAATATATG-CTT-G-GTT----ATA--TAACA---GTTTT---------ATTTA--ATATA---AA-TCGA-T--GTA-T-GAGG------G-ACA--A----CATCAA-TT----CT-A---------A-CTGCACAGGTCCA------TG-------TAA-TAT-GAT-TGCGA-TG---AAAAAT-GTTGAATAGCG-------TTAT-TT-CTGGTGT-G-CGGTACACA-TATAAAGA-AA--TCA-ATaataagtgatctacagta
gi|16 : AACACAG--TTAAA-AA-T-AACTT-A--AATTTC-G-CGAA--TAGATC-CGCTCCT-GCAT-TTATG-----A-TCGT---A-ATGTC--A-----------A-GT-G----TG---------TACGTCT----T----TGT-ATG---------------------TAC----C-G-TT-----ATTGA--ATTTA-TCGACTTATTCAAA----TTACCA----CTTTAT-ACCCAT-GC-TTGCTAAATGTACAG-GTA-ATT--T-CT---TGG---GT-AAAT---T----T----TAC-T-AATTGAA--TG--------AA--GAAA---A----C-G---CC-TCAC------CGC-------TGAGCCT---CGT-att
gi|22 : AATGCAG--TTAAA-AA-T-AACTT-A--TATTTC-G-CCA---------------------T-TTATG-----A-TCGT---A-ATGTC--A-C--------TGCAT-G----TGTACAAAATGTACGTCT----T----TGT-ATG---------------------TAC----C-G-TTAA---ATTGA--ATTT
gi|9 : ATACAG--TTAAG-AA-TTAACTT-G--TATTTC-A-TGAA--TAGATCTCCCTCTT-GCAT-TTATG-----A-TTGT---A-ATGTC--A-C--------TACAT-G----TG---------TACGTCT----T----TGT-ATG---TACCGTTCAAATGTCTCATA-----T-G-TTCAAATGTTGA--ATTTA-TCGACTTATTGAAA----TGACCA----GTTTAT-ACCCAT-GT-CTGG------TAGTG-GTA-ATT--A-C----TTA---TT-GCCT---TGTAAT----TACGT-TACTGAT--TG--------AC--GACA---A----C-G---CC-TCAC------CGC-------TGTGCCT---CGT-GGCAATCATAATGACTT---GAGTTTAA--TTTG--T----TT----GTAA-AGCGAT--TC------CCTTTA---TT--TAATGTTTA------T----A------A-------G--AGAA-----AC--ATC----TACAATAAT-TTTT-G-TAAGG-TT-ATT--T-TTT--CAAGTTCTTCAAT--AAATATATG-TTC-G-GTT----A-A--C-ACA---G
gi|15 : CT-GTGC-TTATA-----A-TTGT---A-AAACC--A-C--------TACAT-A----CG---------TGCG-CT----T----TCT-ATT---A-----------------TAAGTACC-G-TTTAAT-ATTGA--GTTTA-TCGACCTACTTGGA----TGACCA----GTTTAT-ACCCAT-GC-TTAC------CACTG-GTA-ATTACT-C----TGACAGGT-AG-T---T----T----TAC-G-CATTAGA--TG--------AA--gtgcatgtaatatgatgacggatgttgaatagcgggtttttttttttctggtttgcggtacacatataaagaaataaatttgaaattatccgtaagggatttattttgcaaaaagtagaaataaacgcgagatatttgaattagcgaatgacccgtctcaggaattaacgcagaaataaatctctcgcgaataataagtgacct
gi|14 : cgttgGCAATCGTAATG--AT------TTTAA--TTTG--T----TTGTtttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgcttaacgatacgagtttttaaagtgtgtttgttgacacagtaattataactttatttaatgggttttttaaaaaaatctgcaataatgtatgcatgcttagtatcttatt
gi|15 : TTTAAAGTGTG--T----TTGTTGACAC-AGTAATTATA------ACTTTA---TT--TA------A------T----G------GGTTTTTTA--AAAA-----A---ATC----TGCAATAATGTA-T-G-CATGC-TT-Aaatgtttctgcaataatttttgcttagcttattttttgatgttcttaaatatatatacagtttggaatgtagcagtttatcttatttacattcgatggatgagggaaataaaccaaaactaactgcacatgtgcatgtaatgtggatggcgatgaaaaatgtgaatagcgtagtttctggtgtgcgtcacaataaagaaatagatgtgagattgtccgtgatggatttattttcaaaagtagaaataacgcgagatattgaattcgcgaagactcgtcttcgcggaattaacgcggaaaatacaaatctctgcgaataataagactttagtgatctaca
gi|6 : cgttgctgtgcttataattgtaaaaccactacatacgtgcgctttctattataagtaccgtttaatattgagtttatcgacctacttggatgaccagtttatacccatgcttaccactggtaattactctgacaggtagttttacgcattagatgaatttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgcttaacgatacgagttTTG--TGGA-TTGTTTGTAGCAGCGAT--TA------GCATTA---TC--TA------A------T----ATCCT--A-------A--AAAC-----AGAAAT-----TGCCACAAT-T--T-A-TATCG-TT-ATC--A-TTC--AAAGT-CTGCAA--------TATG-TTT-G-ATT----AT------C-----TGGT---------ATTTC----C-----CA-T-AA-C--GTA-C-GAAG------A-AACTAA----CATATA-TT--A-CT-A---------TTCTCCATAGGTAC-------TG-------TAACTAA-AAT-GG-AA-TGCT-AAAT----TTGAATAGCG-------TT----T-CTGGTCT-G-AATCACTTA-TACGAGAA--A--TAA-ATTTGAG-ATTGTTTGCA-GTAATGTTTGTA-TTTTGGC-AA--GAGTAAATA--ATAG-ATA-CGA-GAT-ACTTTG--A--TTTGC--ATAG-G-CCGTT-TAAA-GAATTAA-AC-AAAGAAC--AAA-ATCTTGCAAATGAAAAgtatcttatt
gi|5 : gttctgtagatactttttttcgctagtattttctttcccgttcacaggtcgatgtttcttcgcgaatactataaatcgagagaataggtttaaacaatgagattaatatttcgcgaatacaccaatactgtacgtatgattctaaatattacatttagtatacgtgtgtaagccttcctctacgttttttggttttttactcaacctatttataacgtatacaagaagttagcagctcgccgctcgtctcagggtctcttttaacggatatgagtggcaattagATATT----TGCAATAAT-TTTT-G-TAGGC-CT-ATT--T-TTC--A-TGTTCTTCAAT--AAATATTTC-TTC-G-GTT----ATA----GCA---GTTTT---------ATCTT--ATCTA---CA-TCGA-T--GTT-T-GAAG------A-CAC--A----CATCAA-TT--G-GG-A---------A-CGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAAT-GTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGCACAAA-TATAAAGA-AA--GAA-ATTTGAG-ATTATCAGTA-AT--GGATT-TA-TTT--GCTAA--ATGTAGA-A--ATTA-ACT-CAT-GAT-A--TTTGAA--TTCGCGAACGA-C-CCGTT-TCAG-GAACTAGCGC-GGA-AAT--AAag
gi|4 : tactgtggattacttatttttcgcaagtaatttatttcgcgtttacagggtccagtgtttatttgcgaatacaataatttgcaatatatagttaaaactagcttatattttgcaagctttagcatttacacatatgatcgtaatatcactacctgtgtacgccttccattgtatgtaccgttattgattctatcgatcgaatcaaatgaacagtttacacccatgcttgctgctgataattattatttgattattttttacttatcaaatgaagaccacgcctcatctttgtctctcatggtaatcttaacggtgtgaatttattatttATATT----TGCAATAAT-TTTTTG-TAGGC-TT-ATT--T-TTC--A-T-TTCTTCA-T--AAATATTTTCTTC-G-GTT----ATA----GCA---GTTT----------ATTTT----CTA---CA-TCGA-T--GTT-T-G-AG------A-CAC--A----CATCAA-TT--G-GG-A---------A-CGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAATAGTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGC-CAAA--ATAAAGA-AA--GAA-ATTTGAG-ATTATCAGTA-AT--GGATT-TA-TTT--GCTAA--ATGTAGA-A--TTAA-CTC---ATGAT-A--TTTGAA--TTCGCGAACGA-C-CCGTT-TCAG-GAACTAGCGC-GGA-AAT--AAtaaatgatatacagta
gi|14 : actacgtgaagctctatcttatttttcgacatagtcattctattttcgcgtttacagggtcagttgtttagtgtttgtgtcaatacaataatcctttgaatatatagttaagaactagcttagtattttgaccaagcttttagcatttacacatatattgccgtacatatcaactaccttgtgtagaccttcaattgttatgtacctacgttatgattctactcgtcgaatcaaaatgaacagttacaccatgcttgctgctgataattattaatttgattattttttacttataaatgaagaccatgccctcattttgtctctcatggtaatcttaacggtgtgaatttattatttTC----TGCAATAAT-TTTT-GCTTAGC-TT-ATT--T-TTT--GATGTTCTT------AAATATATA-TAC-A-GTTTGGAATG--TAGCA---G-TTT---------ATCTT--ATTTA---CATTCGA-T--GGA-TGAGGG------A-AAT--A----AACCAA--A--A-CT-A---------A-CTGCACATGTGCA------TG-------TAA-TGTGGAT-GGCGA-TG---AAAAAT-G-TGAATAGCG-------TAGT-TT-CTGGTGT-G-CGTCACA----ATAAAGA-AA--TAG-ATGTGAG-ATTGTCCGTG-AT--GGATT-TA-TTT--TC-AA--AAGTAGA-A--ATAA---CGCGA-GAT-A--TT-GAA--TTCGCGAA-GA-C-TCGTCTTCGCGGAATTAACGCGGAA-AATACAAATCTC-TGCGAATAATAAtaatatgatataca
gi|9 : gcaatcgtaatgattttaatttgtttgtaatgttTT--TATTT--AATGTTTAT-AAG--AGAAACAT----C-----------TA--CAATA---ATTTTTGTAAGGTTATTTT--TTCAAGTTCT-TCAA-T--AAA-T-ATA-----------T--G----T-TCGG-TT--A--------------A-C---ACAGGTGCA------TG-------TAA-TAT-GAT-GACGG----------AT-GTTGAATAGCGGGTTTTTTTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGA-AA--TAA-ATTTGAA-ATTATCCGTA-AG--GGATT-TA-TTTT-GCAAA--AAGTAGA-A--ATAA-ACG-CGA-GAT-A--TTTGAA--TTAGCGAATGA-C-CCGTC-TCAG-GAATTAACGC-AGA-AAT--AAATCTCTCGCGAATAATAAgactttagtgatctaca
gi|19 : atacagttaagaattaacttgtatttcatgaatagatctccctcttgcatttatgattgtaatgtcactacatgtgtacgtctttgtatgtaccgttcaaatgtctcatatgttcaaatgttgaatttatcgacttattgaaatgaccagtttatacccatgtctggtagtggtaattacttattgccttgtaattacgttactgattgacgacaacgcctcaccgctgtgcctcgtggcaatcataatgacttgagtttaatttgtttgtaaagcgattcccTT--T-TTT--CATGTTCTTCAAT--AAATATATG-TTC-GCGTT----ATGATTAGCA---GTTTT---------ATTTT--CTTTA---CA-TCGATT--GAATT-GCGGA-----A-AAT--A----CACCAAGTT--A-CA-A---------A-CTGCACAAGTGCA------TGTACATGTTAA-TAT-GAT-GGCGATTG---TAAAAT-ATTGAATAGTG-------TT-T-TT----GTGT-GACGGTACACATTATAAgtgacct
gi|20 : A-T-ACAC------A-GGT--G----CAAGAA-TT--A-TT-ACTACATGTAA-CTGCACAGGTGCAAGTACATG-------TAA-TAT-GAT-GACGA-TG---AAAAAT-GTTGAAATGCG-------TTGA-TT-CTGGTGT-G-CTTTACAAA-TTTAAAGA-AA--TAA-ATGTAAG-ATTATCCATG-AT--GGATT-TA-TTT--TCAAA--AAATAGA-A--ATAA-A
gi|21 : gaaG------A-AAT--GGTTACAGCAG-AT--A-C--G---------A-TTGCA-AGGTACAA-----TG-------TAAGTAT-GATAGGTTA-AGTAAAAAAAT-GTTGAATA-----------TGTGTT-CTGGTGTAA-CAGCAC-----------------TAACATTTGAGAATTAACCGTAGAT--GGATT-TA-TTTG-GCAGGGCAAG-AGA-A--Acgcg
gi|18 : gT-GTTTAATAG----------TGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTATCTGTA-ATG-GGGTT-TA-TTT--cgcaaaacgtcgagccaaatatat
gi|17 : -GTTTAATAG---------TTGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTATCTGTA-ATG-GGGTT-TA-TTT--ttatttttctatattatctgtaatggatgtatttgcaggaagtagaaatgaacgcaagatatttgaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgaatacgtaatctacact
gi|18 : -ATTATCTGTA-AT--GGATG-TA-TTT--GCAGG--AAGTAGA-A--ATGA-ACG-CAA-GAT-A--TTTGAA--TTTACGATCGA-C-CCGTT-TCAC-GAATTAACAC-GGA-AAT--TGATATCTAGCGAATAttttattttttctatattatctgtaatggatgtatttgcagagaagtaaataatacgcaagatatttgaaaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgagtacgtaatctaca
gi|17 : tgtttaatagtgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttatttttctat-ATTATCTGTA-AT--GGATG-TA-TTT--GCAGAG-AAGTA---A--ATAATACG-CAA-GAT-A--TTTGAAAATTTACGATCGA-C-CCGTT-TCAC-GAATTAACAC-GGA-AAT--TGATATCTAGCGAGTAcgtaatctacact
gi|23 : gtttaatagttgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttttattttttctatA--AAGTAGA-A--TTAA-ACG-CGA-GAT-A--TTTGAA--ATAACGAACAA-C-CCATC-TTGC-GAATTAATGC-GGA-ATC--AAATCTCTCACAAA-AATAAcgtaatctaca
gi|24 : GTAGA-A--ATAA-ACG-CGA-GAT-A--TTTGAA--TTTTCATACGA-C-CCGTC-TCGC-GAATTAACGC-GGA-AAT--AAATCTATCGCGAATAATAgtgatcaac
gi|5 : T-A--TTGTA---TTCGCAAATAAACACTGGA-CC-C-TG-TAAACGC-GAA-A-T--AAATTACTTGCGAAAAATAAggtgatct
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|27 ): AATGCGAGATTATCCGTGATGGATTTATTTTCAAAA
Alignments
lowQualScore : 11 22 222 111111111 111111111 1111 3333333333333333333333 11 111111111 1111111 1111111 5555555555555555555555555555555 11111111 111111 222222222
lowQualScore : 3 2 66 5 2 3 3 77 44 66 11 000 5 3 3 555 3 44 3 3 4 666 33 2 2 66 2 2 2 2 2 2 2 777777 2 8888888 2 2 55 000000000 444 555555555 2 444 3333 8888 2 777777 2 444 66666 0000000000000000000000 888 5 0 6666 2 2 2 888888 2 777 2 88888 2 555 2 22 555 6666 3 1 44 888 44 11 6666 3 3 0 555555555 2 66666 7777777 0 33 0000000 2 5555555 555 44 4444444444444444444444444444444 44 88888 55 5555 0 2 2 5 2 33 66 2 2 2 2 2 2 6666 44 555 666 1 3 44 55555555 33 555 2 7777 2 2 000000 8888888 5 2 2 2 444 2 000000000 2 2 1 2 2 2 2 888 2 0 2 333 2 4 2 77 0 55 2 9999999 2 2 44 1 3 3 3 555 3
lowQualScore : . . .. . . . . .. .. .. .. ... . . . ... . .. . . . ... .. . . .. . . . . . . . ...... . ....... . . .. ......... ... ......... . ... .... .... . ...... . ... ..... ...................... ... . . .... . . . ...... . ... . ..... . ... . .. ... .... . . .. ... .. .. .... . . . ......... . ..... ....... . .. ....... . ....... ... .. ............................... .. ..... .. .... . . . . . .. .. . . . . . . .... .. ... ... . . .. ........ .. ... . .... . . ...... ....... . . . . ... . ......... . . . . . . . ... . . . ... . . . .. . .. . ....... . . .. . . . . ... .
lowQualScore : 1 9 88 7 9 1 1 33 11 55 99 888 2 3 3 888 3 66 3 6 0 222 77 7 7 33 7 7 7 7 5 5 5 222222 5 1111111 5 5 99 444444444 666 333333333 5 444 1111 8888 5 222222 5 444 22222 9999999999999999999999 222 3 8 1111 9 9 9 222222 9 999 9 11111 9 000 9 88 000 1111 3 3 66 555 22 55 5555 1 1 2 333333333 7 77777 9999999 9 77 4444444 9 2222222 888 66 2222222222222222222222222222222 66 33333 00 7777 5 7 7 3 7 44 33 9 9 9 9 9 9 1111 22 444 555 9 1 22 66666666 99 000 9 9999 9 9 333333 7777777 3 7 7 7 777 4 111111111 4 4 2 4 4 7 4 888 4 8 2 999 2 4 2 55 4 66 7 1111111 7 7 22 9 1 1 3 888 2
consensus : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AGT-AT-T--TT-A--TTT-CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--NTTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTGAT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGG-C---GT-GAGT-----TT----AATTTG--T----T--TGTTTGTAA-AGCGATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTTC-ATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGAT--GTATGA-G------GAAAT--ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
Reference ( family-3358 ) : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AGT-AT-T--TN-A--TT--CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--ATTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----NCT-TGA---GT-AGTT---T----TTAC-TAATTGAT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGG-C---GT-GAGT-----TT----AATTTG--T----T--TGTTTGTAA-AGCGATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTTN-ATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGAT--GTATGA-A------GAAAT--ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
gi|1 : GTAGT-TCACTTA-ATTT--TCG-CG-AGT-AT-T--TC-A--TTG-CGCGTT-GGTAGGGTGCGG-TGTT-TA---TTT-GCA--AA-TATCATAA-TTC-GA--AAGGATACAG--TTAAA-AA-T--AACG-TA-TATTTT-G-CGAACACCTC-TGCTC---G----TTC------TG-AT-------TGT-T-ATATC--AT--------TA-CACG---------TG-TTCG---CCTTCCAT----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--TTCTC-TCGACCTAGTCAGATGAC----CATTTTAT-ACCCAT-GC-TTGC------TACTC-GTA---CG-T----ACC-TGA---GT-AGGT---T----TT
gi|1 : -C---AT-GAGT-----TT----AATTTG--TGTGCT--TGTTTGTTC-AGCGATTA------ACTTTA---TTAATA------ACGTTTAT----A----A-------A--AAAA-----A---ATC----GACATTAATTTAT-G-CATGC-TT-TTTATTTTTC-ATGTTTTTCAA-TGCA-TTTAT-C-TTC-G-ATT----GTT--TTGCA---GTTTTATTTT--ATCTGCA-TCAAT--GTATGA-A------GAAAT--ACA---CTGA-TT--A-CTTA-AATGCACATGCACA------TG-------AAA-TAT-GAT-GGCAT-TA---CAAAAT-GTTGAATAG----------TGT-TT-CTGTTGT-A-CGGCACACA-TATAAAGAA---ATAA-ATCTAAC-ATTAT---CCATA-AT-GAATTTA-TTT--GCAAA--AAGTAGA-AAT---ATAGA-TCG-CGAGATCATTGAA--ATCGCGAACGACCCACC-TCGC-GAATC-AACACGGAA---TTAAATCTATCGCGAATAATAAgtgtattcaatgaattgttacctgtaattgtcgattgtcgttctataatcactttcataatcgtgtggtcttgtcatgagtttaatttgtgtgcttgtttgttcagcgattaactttattaataacgtttataaaaaaaaatcgacattaatttatgcatgctttttatttttcatgtttttcaatgcatttatcttcgattgttttgcagttttattttatctgcatcaatgtatgaagaaatacactgattacttaaatgcacatgcacatgaaatatgatggcattacaaaatgttgaatagtgtttctgttgtacggcacacatataaagaaataaatctaacattatccataatgaatttatttgcaaaaagtagaaatatagatcgcgagatcattgaaatcgcgaacgacccacctcgcgaatcaacacggaattaaatctatcgcgaataataagtgatctacag
gi|10 : gtagttcacttaattttcgcgagtatttcattgcgcgttggtagggtgcggtgtttatttgcaaatatcataattcgaaaggatacagttaaaaataacgtatattttgcgaacacctctgctcgttctgattgttatatcattacacgtgttcgccttccattgtatgtaccgttattgattctctcgacctagtcagatgaccattttatacccatgcttgctactcgtacgtacctgagtaggttttgtgtattcaatgaattgttacctgtaattgtcgattgtcgttctataatcactttcataatcgtgtggtcttgtCTGTAGA-TCACTTA-TTTT--TCG-CG-GGT-AT-T--TT-ATTTT--CACGTTT-ACACTGTCTGG-TGTT-T-----------------------A-TTC-GC--GAGAACACAG--TTAAG-AA-T--AACT-TA-TATTTT-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AC-------CGT-A-ACGTC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----TTT----------------------ATTGA--AGTTA-TTGACCTATTCAAATGAC----CAATTTAT-CCCCAT-GG-TCGC------TTTAG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAATTGAT--TGAAGAAA---A--CG--CCTCACCG----CTAAGCCTCGT-GG-CAATCGCAA---------T-GAGT-----TT----AAATAG--T----T--TGTTTGTAA-AGCGATTA------CCTTTA---TT--T-------A------T----A----A-------A----AA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TGTTC-ATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATG--TAGTACTTATTTTATGTTCCATGTACA-TCGAT--GTATGA-G------AAAAC--ACA---CCTA-TT--A-CT-A-ACTGCACAGGTGCA------TT-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTCAATAGTG-------TTGT-TT-CTGGTGT-G-CAGTACA------AAAG-------------TGAG-ATTAT---CCG----T-GGATTTA-TTT--TCAAA--Agtgatctacag
gi|11 : aAATACAG--TTAAA-A--T--AACT-TA-TATTTC-G-CTATTAAATC-CGCTCCT-GCAT-TCA------TG-AT-------CGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TGT------G-GAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAATGACCATGCAGTTTAT-ACCCAT-GC-TTGC------TATTG-GTA---AT-T----ACT-CGA---GT-ATTT---T----TTAT-TAACTGAT--TGAAGACA---G--TG--CCTCACCG----TTGTGCCTCGT-GA-CAATCGTACTGA-CATTAT-GAGT-----TT----AATTTG--T----T--TGTTTATAA-AGCGATTA------GCTTCA---TT--TAATGTGTA------T----G----A-------A--AGAA-----AC--ATC----TGCAATAAGTTTT-G-TTAGC-TT-ATT--TTGTC-ATGTTCTTCGA-TAAA-TATAT-G-CTT-G-GTT----ATA--TAACA---GTTTTATTTA--ATATAAA-TCGAT--GTATGA-G------GGACA--ACA---TCAA-TT----CT-A-ACTGCACAGGTCCA------TG-------TAA-TAT-GAT-TGCGA-TG---AAAAAT-GTTGAATAGCG-------TTAT-TT-CTGGTGT-G-CGGTACACA-TATAAAGAA---ATCA-AT
gi|12 : CTATAGA-TCTCTTA-TTTT---CA-CG-AAT-AT-T--TT-AA-TT--CGCGTTTA-CATGGTCCGT-TATT-TA---ATC-GCT--AA-TACAATAA-TTT-GC--GGGAATACAG--TTAAA-AA-T--AAC---A-TATTTC-G-CGAATAGATC-CGTTTCT-TCAT-TTA------TG-AT-------TAT-A-ATGTC--AC--------TA-CATC---------TC-TACG---TCT----T----TG-TAT------G-TAC---C-----ATT----------------------ATTGA--ACTTA-TCGATTTATTCAAATGAC----CAGTTGAT-ACCCAT-GC-TTGC------TATTT-GTA---TT-T----AAT-TGA---GT-AG-T---T----TTAT-TAACTAGT--TGAAT-TAT--A--CG--CCTCACCAATATATATGCCTCGT-GG-CAATCGTGATGG-C---AT-GCGT-----TT-----AT-----T----T--TCTTTGTAA-AGCAATTA------TCTTTA---TT--TAATGTTTA------T----A----A-------A--AGAA-----ACATA------TACAAT-ATTTCT-A-TAA-C-TTAATT--TTTTC-TTATTCTTCAA-TAAA-TATGT-G-TTT-G-TTG----ATA--TAGCA---GTTTTATTTT--ATTCACA-TCGAT--GCATGA-T------GGAGT--ACA---CCAA-TT--att
gi|13 : ttaCTGTAGA-TCACTTA-TTTT--TCA-CG-AGT-AT-T--TT-AT-TT--CACGTTT-ACGCGGTCTAG-TGTT-TA---TTC-GAG--AA-TACAATAA-TTC-GG--GAGAACACCG--TCGAA-AA-T--AACT-TT-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AC-------CGT-A-ATGCC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAACCGC----CAGTTGAT-ACCCAT-GT-T----------------------T-T----AGT-TGA---GT-AGTT---T----TTAC-TAATGCAT--TGAAGAAA---A--CG--CCTCACGG----CTGAGCCTCGT-AG-CAATCGTAA---------T-GAGT-----TT----GAATAG--T----T--TGTTTGTAA-AGCGATTA------TCTTTA---TT--T-------A------T---------A-------A--AGAA-----ACATATC----TGCAATAATTC-----TAAGC----ATT--TTTTct
gi|14 : ataG-CAATCGTAA---------T-GATT-----TT----AATTTG--T----T--TGTc
gi|14 : TC----TGCAATAATTTTT-GCTTAGC-TT-ATT--TTTTG-ATGTTCTTAAA-TATA-TATACAG-TTT-G-G-A----ATG--TAGCA---G-TTTATCTT--ATTTACATTCGAT--GGATGAGG------GAAAT--AAA---CCAA--A--A-CT-A-ACTGCACATGTGCA------TG-------TAA-TGTGGAT-GGCGA-TG---AAAAAT-G-TGAATAGCG-------TAGT-TT-CTGGTGT-G-CGTCACA----ATAAAGAA---ATAG-ATGTGAG-ATTGT---CCGTG-AT-GGATTTA-TTT--TC-AA--AAGTAGA-AAT-------A-ACG-CGAGATA-TTGAA--TTCGCGAA-GACTCGTCTTCGCGGAATT-AACGCGGAAAATACAAATCTCT-GCGAATAATAAaatgtttctgcaataatttttgcttagcttattttttgatgttcttaaatatatatacagtttggaatgtagcagtttatcttatttacattcgatggatgagggaaataaaccaaaactaactgcacatgtgcatgtaatgtggatggcgatgaaaaatgtgaatagcgtagtttctggtgtgcgtcacaataaagaaatagatgtgagattgtccgtgatggatttattttcaaaagtagaaataacgcgagatattgaattcgcgaagactcgtcttcgcggaattaacgcggaaaatacaaatctctgcgaataataagactttagtgatctaca
gi|15 : gcaatcgtaatgattttaatttgtttgtaatgtt-CGTTGCT-GTGC-TTA------TA-AT-------TGT-A-AAACC--AC--------TA-CATA---------CG-TGCGCTTTCTA---T----TA-TAA------G-TAC---C-----GTTTAAT------------------ATTGA--GTTTA-TCGACCTACTTGGATGAC----CAGTTTAT-ACCCAT-GC-TTAC------CACTG-GTA---AT-T----ACTCTGACAGGT-AGTT---T----Tgactttagtgatctaca
gi|15 : TAACGA-T---AC-GAGT-----TTTTAAAGTGTG--T----T--TGTTGACAC-AGTAATTATA----ACTTTA---TT--TA------A------T----G----GGTTTTTTA--AAAA-----A---ATC----TGCAATAATGTAT-G-CATGC-TT-AGT--ATCTT-ATacgcattagatgaatttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgcttaacgatacgagtttttaaagtgtgtttgttgacacagtaattataactttatttaatgggttttttaaaaaaatctgcaataatgtatgcatgcttagtatcttatt
gi|16 : cgttgctgtgcttataattgtaaaaccactacatacgtgcgctttctattataagtaccgtttaatattgagtttatcgacctacttggatgaccagtttatacccatgcttaccactggtaattactctgacaggtagttttacgcattagatgaatttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgctAACACAG--TTAAA-AA-T--AACT-TA-AATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAATTAC----CACTTTAT-ACCCAT-GC-TTGCTAAATGTACAG-GTA---AT-T----TCT-TGG---GT-AAAT---T----TTAC-TAATTGAA--TGAAGAAA---A--CG--CCTCACCG----CTGAGCCTCGT-t
gi|17 : -GTTTAATAG---------TTGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTAT---CTGTA-ATGGGGTTTA-TTT--
gi|17 : -ATTAT---CTGTA-AT-GGATGTA-TTT--GCAGAG-AAGTA---AAT---A---ATACG-CAAGATATTTGAAAATTTACGATCGACCCGTT-TCAC-GAATT-AACACGGAA---ATTGATATCTAGCGAGTAttttattttttctatattatctgtaatggatgtatttgcagagaagtaaataatacgcaagatatttgaaaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgagtacgtaatctaca
gi|18 : gtttaatagttgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttttattttttctatT-GTTTAATAG----------TGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTAT---CTGTA-ATGGGGTTTA-TTT--cgtaatctaca
gi|18 : -ATTAT---CTGTA-AT-GGATGTA-TTT--GCAGG--AAGTAGA-AAT---G---A-ACG-CAAGATATTTGAA--TTTACGATCGACCCGTT-TCAC-GAATT-AACACGGAA---ATTGATATCTAGCGAATAttatttttctatattatctgtaatggatgtatttgcaggaagtagaaatgaacgcaagatatttgaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgaatacgtaatctacact
gi|19 : tgtttaatagtgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttatttttctatTT--TTTTC-ATGTTCTTCAA-TAAA-TATAT-G-TTC-GCGTT----ATGATTAGCA---GTTTTATTTT--CTTTACA-TCGAT-----TGA-ATTGCGGAAAAT--ACA---CCAAGTT--A-CA-A-ACTGCACAAGTGCA------TGTACATGTTAA-TAT-GAT-GGCGATTG---TAAAAT-ATTGAATAGTG-------TT-T-TT----GTGT-GACGGTACACATTATAAcgtaatctacact
gi|2 : TCCTGTAGA-TCACTTA-TTTTA-TCG-CG-GGT-AT-A--TA-A--TT--TGCGTCTAACACG-CCTGG-TGCT-TA---TTCTGCG--AA-TACAATAA-TTC-GC--GAGAATATAG--TTAAA-AA-T--AACT-TT-TATTTC-G-CCAATAGATC-AGCTCCT-GCAT-TTA------TG-AT-------CGC-A-ATGTC--AC--------TA-CGTG---------TGCTACG---TCT----T----TG-TAT------GCTA----C-----GTT----------------------ATTGA--TTTTA-TCGACCTATTGAAATGAC----CAGTTTAT-ACCCAT-GC-TTCC------TACTG-GTA---AT-T----TCG-TGA---GT-AGAT---T----TTAC-TAATTGAT--TGAAGACA---A--TG--CCTT-CCG----CTGTGCATCGT-GG-CAATCGCATTGG-C---AT-GCGT-----TT----AATTTG--T----T--TGTTGGTAA-AGCAATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTATT-G-TAAGC-TT-ATT--TTTTA-ATGTTCTTCAA-GAAA-TACAT-G-TTC-G-GTT----ATA--CAACA---GTTTTATTTT--ATCTACA-TCAAT--GTATAC-A------GAAAT--GCA---TCAA-TT--A-CT-A-ACTGTACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAACAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGTACACA-TATAAAAAT---ATAA-ATTTGAG-ATTTT---CTGTA-AT-TGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ATC-CGAGATATTGGAA--TTTGCGAATGACCTGTA-TCGC-TAATT-AACGCGAAA---ATAAATCTCTTGCAAATAATAA
gi|20 : T-A-ACTGCACAGGTGCAAGTACATG-------TAA-TAT-GAT-GACGA-TG---AAAAAT-GTTGAAATGCG-------TTGA-TT-CTGGTGT-G-CTTTACAAA-TTTAAAGAA---ATAA-ATGTAAG-ATTAT---CCATG-AT-GGATTTA-TTT--TCAAA--AAATAGA-AAT---A---A-ACG-CG
gi|21 : gaaatacacaggtgcaagaattattactacatgT--ACA---GCAG-AT--A-C--G-ATTGCA-AGGTACAA-----TG-------TAAGTAT-GATAGGTTA-AGTAAAAAAAT-GTTGAATA-----------TGTGTT-CTGGTGTAA-CAGCAC-----------------TAACATTTGAGAATTAA---CCGTAGAT-GGATTTA-TTTG-GCAGGGCAAG-AGA-AACGCAA---A-ACGTCGAG
gi|22 : ggaaatggtAATGCAG--TTAAA-AA-T--AACT-TA-TATTTC-G-C-------------------CAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TG-CATGTGTACAAAATG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTTAA--------------------ATTGA--ATTTccaaatatat
gi|23 : A--AAGTAGA-ATT---A---A-ACG-CGAGATATTTGAA--ATAACGAACAACCCATC-TTGC-GAATT-AATGCGGAA---TCAAATCTCTCACAAA-AATAA
gi|24 : GTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTTTCATACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTATCGCGAATAATAgtgatcaac
gi|24 : AGA-TCACCTA-TTAT--TCG-CG-A-T-AGAT--TT-A--TTTCCGCGTTggtgatct
gi|25 : gtagaaataaacgcgagatatttgaattttcatacgacccgtctcgcgaattTTCTGTAAA-TCACTTA-TTTT--TCG-CG-AGT-AC-T--TT-AT-TT--CGCATTT-ATAGGATCCAG-TGTT-TA---TTC-GAG--AA-TTCAATAA-TT
gi|26 : TGTAGA-TCACTTGTTTTT--TCG-CA-AGT-AT-TTATT-AT-TT--TGCGTTT-GTAGGATGTGGTTGTT-TA---TTC-GCA--AA-t
gi|27 : gtA-ATGCGAG-ATTAT---CCGTG-AT-GGATTTA-TTT--TCAAA--Aattcat
gi|3 : CTGTCGAATCACTTA-TTTT--TCAACG--GT-AT-TG-TT-A--TT--T---TTCAAT----TACAG-TGT---------------------CAATTA-TTC-GC--GAAAATACAG--TTTAA-AT-T--AACT-TA-TATTTT-G-CGAATTGATC-AGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATATC--AT--------TG-CTTT---------TG-TACG---TCT----T----TG-TATATATATG-TAT---C-----GTT----------------------ATTGA--TTTTA-TCGACTAAAACTAATGAC----AAGTTTCTTACCCAT-GC-ATAA------TACTG-GT----------------------------T---T----TTAC-GTATCAGA--AGAAGACGTGTA--CGACCCCCACCG----CTGTTATTTGT-GG-CA-TCATAACGG-C---GT-GAGT-----TT----CATTTG--T----T--TGTTTGCAA-AGCCATTATATGTAGATCTA---TC--TA------A------T----G----ATCAT---AGTAGAA-----AAATATC----TTCAATAACTTTT-G-TAAGC-TT-ACA--TTTT--ATGTTCTTCAA-TAAA-TATAT-A-TTC-T-GTT----ATA--TAGCA---GTATTATTTT--ATTTGCA-TCGTT--GTATGA-G------AGAAT--ACA---TCGA-TT--A-CT-A-ACGGCACAGGTGCA------CA-------TAA-ATT-GTT-GGTGA-TG---AAAAAT-GTTGAACAGTG-------TTGT-TT-CTGGTAT-G-CGGTACACA-TATAGAGAA---G-GG-ATCTGAA-ATAAT---CCGCA-AT-GAATTTA-TTT--GCAAA--AGCCAGA-GAT---G---A-GAG-CGATATATTTGAC--TTCCCGAATGA-CCATC-TCAC-GAATT-AACGCACAA---ATAAATCTCTCCCAAATAA
gi|4 : taaCTTA-TTTT--TCGACATAGTCAT-T--CT-A--TTTTCGCGTTTA-CAGGGTCAGT-TGTT-TAGTGTTT-GTGTCAA-TACAATAA-TCCTTT--GAATATATAG--TTAAG-AACT--AGCT-TAGTATTTT-GACCAA--------GCTTTTAGCAT-TTA------CACATATATTGCCGT-ACATATCA-AC--------TACCTTG---------TG-TAGA---CCTTCAAT----TGTTAT------G-TACCTAC-----GTT----------------------A-TGA--TTCTACTCGTCGAATCAAAATGAA----CAG-TTAC-A-CCAT-GC-TTGC------TGCTG-ATA---AT-TATTAATT-TGA---TT-ATTT---T----TTAC-TTA-TAAA--TGAAGACC---A--TGC-CCTCATT-----TTGTCTCTCAT-GG-TAATCTTAACGG-T---GT-GAAT-----TT----A--TTA--T----TTATATTTGCAA-
gi|4 : actacgtgaagctctatATATT----TGCAATAATTTTTTG-TAGGC-TT-ATT--TTT-C-AT-TTCTTCA--TAAA-TATTT-TCTTC-G-GTT----ATA----GCA---GTTT-ATTTT----CTACA-TCGAT--GTTTGA--------GACAC--ACA---TCAA-TT--G-GG-A-ACGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAATAGTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGC-CAAA--ATAAAGAA---AGAA-ATTTGAG-ATTAT---CAGTA-AT-GGATTTA-TTT--GCTAA--ATGTAG--AAT---T---A-ACT-CATGATATTTGAA--TTCGCGAACGACCCGTT-TCAG-GAACT-AGCGCGGAA---ATAAtaattttttgtaggcttatttttcatttcttcataaatattttcttcggttatagcagtttattttctacatcgatgtttgagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatagttgaacagcatgttgctggtggacggccaaaataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataatatgatataca
gi|5 : actacgtgaagctctatcttatttttcgacatagtcattctattttcgcgtttacagggtcagttgtttagtgtttgtgtcaatacaataatcctttgaatatatagttaagaactagcttagtattttgaccaagcttttagcatttacacatatattgccgtacatatcaactaccttgtgtagaccttcaattgttatgtacctacgttatgattctactcgtcgaatcaaaatgaacagttacaccatgcttgctgctgataattattaatttgattattttttacttataaatgaagaccatgccctcattttgtctctcatggtaatcttaacggtgtgaatttattatttCTGTGGA-TTACTTA-TTTT--TCG-CA-AGT-AA-T--TT-A--TTT-CGCGTTTA-CAGGGTCCAG-TGTT-TA---TTT-GCG--AA-TACAATAA-TTT-GC--AATA-TATAG--TTAAA-AC-T--AGCT-TA-TATTTT-G-CAA---------GCTTTA-GCAT-TTACACATATG-AT-------CGT-A-ATATC--AC--------TA-CCTG---------TG-TACG---CCT----TCCATTG-TAT------G-TAC---C-----GTT----------------------ATTGA--TTCTA-TCGATCGAATCAAATGAA----CAGTTTAC-ACCCAT-GC-TTGC------TGCTG-ATAATTAT-T----ATT-TGA---TT-ATTT---T----TTAC-TTATCAAA--TGAAGACC---A--CG--CCTCATCT----TTGTCTCTCAT-GG-TAATCTTAACGG-T---GT-GAAT-----TT----A--TTA--T----TTATATTTGCAA-taatatgatataca
gi|5 : taATATT----TGCAATAATTTTT-G-TAGGC-CT-ATT--TTT-C-ATGTTCTTCAA-TAAA-TATTT-C-TTC-G-GTT----ATA----GCA---GTTTTATCTT--ATCTACA-TCGAT--GTTTGA-A------GACAC--ACA---TCAA-TT--G-GG-A-ACGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAAT-GTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGCACAAA-TATAAAGAA---AGAA-ATTTGAG-ATTAT---CAGTA-AT-GGATTTA-TTT--GCTAA--ATGTAGA-AAT---T---A-ACT-CATGATATTTGAA--TTCGCGAACGACCCGTT-TCAG-GAACT-AGCGCGGAA---ATAAtaatttttgtaggcctatttttcatgttcttcaataaatatttcttcggttatagcagttttatcttatctacatcgatgtttgaagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatgttgaacagcatgttgctggtggacggcacaaatataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataaatgatatacagta
gi|6 : tactgtggattacttatttttcgcaagtaatttatttcgcgtttacagggtccagtgtttatttgcgaatacaataatttgcaatatatagttaaaactagcttatattttgcaagctttagcatttacacatatgatcgtaatatcactacctgtgtacgccttccattgtatgtaccgttattgattctatcgatcgaatcaaatgaacagtttacacccatgcttgctgctgataattattatttgattattttttacttatcaaatgaagaccacgcctcatctttgtctctcatggtaatcttaacggtgtgaatttattatttTTCTGTAGA-T-ACTT--TTTT--TCG-CT-AGT-AT-T--TT-C--TTT-CCCGTT---CACAGGTCGA-TGTT-TC---TTC-GCG--AA-TACTATAA-ATC-GA--GAGAATAGGT--TTAAACAA-TGAGATT-AA-TATTTC-G-CGAATACA-C-CAATACT-GTAC-GTA------TG-AT-------TCTAA-ATATT--ACATTTAGTATA-CGTG---------TG-TAAG---CCT----TCC--TC-TAC------G-T------------TT----------------------TTTGGTTTTTTACTCAACCTATTTAtaaatgatatacagta
gi|6 : gGAAGTTA---G--CA--GCTCGCCG----CT-CGTCTCAG-GGTCTCTTTTAACGGAT---AT-GAGTGGCAATT----AGTT-G--TGGA-T--TGTTTGTAGCAGCGATTA------GCATTA---TC--TA------A------T----ATCCTA-------A--AAAC-----AGAAAT-----TGCCACAATTTAT-A-T---CGTT-ATC--ATTCA-AAG-TCTGCA--------ATAT-G-TTT-G-ATT----ATC--TGG---------TATTT----CCCATA----AC--GTACGA-A------GAAACTAACA---TATA-TT--A-CT-ATTCTCCATAGGTAC-------TG-------TAACTAA-AAT-GG-AA-TG---CTAAAT--TTGAATAGC----------GT-TT-CTGGTCT-G-AATCACTTA-TAC-GAGAA---ATAA-ATTTGAG-ATTGTTTGCAGTA-AT-GTTTGTA-TTTTGGC-AA--GAGTAAATAAT---A---G-ATA-CGAGATACTTTGA--TTTGCATAGG--CCGTT-TAAA-GAATTAAACAAAGAA---CAAAA--TCTTGCAAATGAAAAtaacgtatacaagaagttagcagctcgccgctcgtctcagggtctcttttaacggatatgagtggcaattagttgtggattgtttgtagcagcgattagcattatctaatatcctaaaaacagaaattgccacaatttatatcgttatcattcaaagtctgcaatatgtttgattatctggtatttcccataacgtacgaagaaactaacatatattactattctccataggtactgtaactaaaatggaatgctaaatttgaatagcgtttctggtctgaatcacttatacgagaaataaatttgagattgtttgcagtaatgtttgtattttggcaagagtaaataatagatacgagatactttgatttgcataggccgtttaaagaattaaacaaagaacaaaatcttgcaaatgaaaaag
gi|7 : gttctgtagatactttttttcgctagtattttctttcccgttcacaggtcgatgtttcttcgcgaatactataaatcgagagaataggtttaaacaatgagattaatatttcgcgaatacaccaatactgtacgtatgattctaaatattacatttagtatacgtgtgtaagccttcctctacgttttttggttttttactcaacctatttataacgtatacaaCTGAAG--TCACTTA-TTTTATTCG-CG-AGT-AT-T--TTTA--TTTTCACGGTTACCATCGTCCCG-GGTTATA---TTC-ACG--AAAGACAATAAATTC-ATCAAAAAATACAGAATTAAG-AA-T--AACTATA-TATTTCAG-CGAATAGATC-CGCTCCT-GCATGTTA------TG-CA-------CGT-A-ATGTCCAAC--------TA-CATGAGTA-----TG-TACA---TCT----T----TT-TAT------G-TAC---C-----GTT----------------------ATTGA--------------------AAT------------TAT-ACC-AT-GC-TTTC------TAGTGAGTAG--ATCT----ACT-TGA---GTTAGTTGTGT----TTAC-TAACTGATATTGAGGACA---AAACGGGCCTAAC-G----CTGTGCCTCGTTGG-CAATTCTAATGA-C---TTTGAGT-----TT----A---TGATT----T--TGCTTGTAA-AGCGATTC------GCTCTA---TT--TA------A------TGTTTA----AT------A--AGAACATCAACATATC----TGCAATAATTTTT-G-TAAGGATT-ATT--TTTTTCAAGTTCTTCAAATAAAGTATAT-G-TTCAG-GTT----ATA--TAGCA---GTTTTATTTC---TTTACA-TCGATCTGTATGA-G------TGAAT--AAAATGTCAA-TTCTATCT-A-ACTACACAGGTGCA------TG-------TAA-TAT-GAT-GGTGA-TG---ACGAAT-GTTGAATAGCAGGTTTT-TTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTATTTT--GCAAA--ag
gi|8 : aAATACAG--TTAAC-AA-G--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TCG------TG-AT-------CGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TAT------G-TAG---CTTTTAATT----------------------ATTGA--ATTCA-TCGACTTATTCGAATGAC----CAGTTTAT-ACCCATTGTATTGC------TATTG-GTA---TT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTGAT--TGAAAACA---A--TG--TCTCACCG----CTGTGCCTTGT-GA-TAATTGTAATGG-C---AT-GAGT-----TT----AATTTG--T----A--TGTTTGTAA-AGCGATTA------GCTTTAATGTT--TAT-----A------T----A----------------GAA-----ACGTATCAGTCTGCAATAATTTTT-G-TTAGC-TT-ATT--TTATC-ATGTTCTTCAA-TAAA-TATAT-G-TTT-G-GTTTAATATA--TAGCA---GTTA-ATT----ATATACA-TCGAT--GCATGA-G------GAAAT--ACA---TCAA-TT----CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGTG-------TTTT-TTTCTGGTGT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---ATGTA-AT-GGATTTA-TTT--GGAAA--AAGTAGA-AAT---A---A-ACG-CGATATATTTGAA--TTAGTGAACGACCCGTC-TCGT-GAAT
gi|8 : CTGTAGA-TCACTTA-TTAT--TCA-CG-AGaataagtgatctacagta
gi|9 : aatacagttaacaagaacttatatttcgcgaatagatccgctcctgcattcgtgatcgtaatgtcactacatgtgtacgtctttgtatgtagcttttaattattgaattcatcgacttattcgaatgaccagtttatacccattgtattgctattggtatttacttgagtagtttttactaactgattgaaaacaatgtctcaccgctgtgccttgtgataattgtaatggcatgagtttaatttgtatgtttgtaaagcgattagctttaatgtttatatagaaacgtatcagtctgcaataatttttgttagcttattttatcatgttcttcaataaatatatgtttggtttaatatatagcagttaattatatacatcgatgcatgaggaaatacatcaattctaactgcacaggtgcatgtaatatgatggcgatgaaaaatgttgaatagtgtttttttctggtgtgcggtacacatataaagaaataaatttgagattatatgtaatggatttatttggaaaaagtagaaataaacgcgatatatttgaattagtgaacgacccgtATACAG--TTAAG-AA-TT-AACT-TG-TATTTC-A-TGAATAGATCTCCCTCTT-GCAT-TTA------TG-AT-------TGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTTCAAATGTCTCATATGTTCAAATGTTGA--ATTTA-TCGACTTATTGAAATGAC----CAGTTTAT-ACCCAT-GT-CTGG------TAGTG-GTA---AT-T----ACT-T-A---TT-GCCT---TGTAATTACGTTACTGAT--TGACGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCATAATGA-C---TT-GAGT-----TT----AA------T----T--TGTTTGTAA-AGCGATTC------CCTTTA---TT--TAATGTTTA------T----A----A-------G--AGAA-----AC--ATC----TACAATAATTTTT-G-TAAGG-TT-ATT--TTTTC-AAGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----Ata
gi|9 : CACAGGTGCA------TG-------TAA-TAT-GAT-GACGG----------AT-GTTGAATAGCGGGTTTTTTTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAA-ATTAT---CCGTA-AG-GGATTTA-TTTT-GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTAGCGAATGACCCGTC-TCAG-GAATT-AACGCAGAA---ATAAATCTCTCGCGAATAATAAacacaggtgcatgtaatatgatgacggatgttgaatagcgggtttttttttttctggtttgcggtacacatataaagaaataaatttgaaattatccgtaagggatttattttgcaaaaagtagaaataaacgcgagatatttgaattagcgaatgacccgtctcaggaattaacgcagaaataaatctctcgcgaataataagtgacct
Alignments
lowQualScore : 222 111111111 111111111 1111 3333333333333333333333 11 111111111 1111111 1111111 5555555555555555555555555555555 1111 111111 222222222
lowQualScore : 2 2 66 5 2 2 2 2 66 2 2 8 000 66 3 3 555 3 44 3 3 4 666 33 2 2 66 2 2 2 2 2 2 2 777777 2 8888888 2 2 55 000000000 444 555555555 2 444 7777 4444 2 777777 2 444 66666 0000000000000000000000 666 5 0 6666 2 2 2 888888 2 777 2 6666 2 555 2 22 555 6666 6 3 3 44 888 44 11 6666 3 3 0 555555555 2 66666 7777777 0 33 0000000 2 5555555 555 44 4444444444444444444444444444444 44 88888 55 5555 0 2 2 5 2 33 2 2 2 2 2 2 2 6666 44 555 666 1 3 3 44 3 2 2 0000 555 2 7777 2 2 000000 8888888 5 2 2 2 444 2 000000000 2 2 1 2 2 2 2 888 2 0 2 333 2 4 2 77 0 55 2 9999999 2 2 44 1 3 3 3 555 3
lowQualScore : . . .. . . . . . .. . . . ... .. . . ... . .. . . . ... .. . . .. . . . . . . . ...... . ....... . . .. ......... ... ......... . ... .... .... . ...... . ... ..... ...................... ... . . .... . . . ...... . ... . .... . ... . .. ... .... . . . .. ... .. .. .... . . . ......... . ..... ....... . .. ....... . ....... ... .. ............................... .. ..... .. .... . . . . . .. . . . . . . . .... .. ... ... . . . .. . . . .... ... . .... . . ...... ....... . . . . ... . ......... . . . . . . . ... . . . ... . . . .. . .. . ....... . . .. . . . . ... .
lowQualScore : 9 7 33 3 7 7 9 9 88 9 9 6 888 99 3 3 888 3 66 3 6 0 222 77 7 7 33 7 7 7 7 5 5 5 222222 5 1111111 5 5 99 444444444 666 333333333 5 444 8888 1111 5 222222 5 444 22222 9999999999999999999999 999 3 8 1111 9 9 9 222222 9 999 9 1111 9 000 9 88 000 1111 7 7 3 66 555 22 55 5555 1 1 2 333333333 7 77777 9999999 9 77 4444444 9 2222222 888 66 2222222222222222222222222222222 66 33333 00 7777 5 7 7 3 7 44 5 9 9 9 9 9 9 1111 22 444 555 9 1 1 22 1 9 9 0000 000 9 9999 9 9 333333 7777777 3 7 7 7 777 4 111111111 4 4 2 4 4 7 4 888 4 8 2 999 2 4 2 55 4 66 7 1111111 7 7 22 9 1 1 3 888 2
consensus : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AG-T-AT-T--TT-A-TTT-CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--NTTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGG-C---GT-GAGT-----TT----AATTTG--T----T--TGTTTGTAA-AGCGATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGA-T--GTA-TGA-GG-AAAT----ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
Reference ( family-3358 ) : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AG-T-AT-T--TT-A-TTT-CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--NTTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGG-C---GT-GAGT-----TT----AATTTG--T----T--TGTTTGTAA-AGCGATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGA-T--GTA-TGA-GG-AAAT----ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
gi|1 : GTAGT-TCACTTA-ATTT--TCG-CG-AG-T-AT-T--TC-A-TTG-CGCGTT-GGTAGGGTGCGG-TGTT-TA---TTT-GCA--AA-TATCATAA-TTC-GA--AAGGATACAG--TTAAA-AA-T--AACG-TA-TATTTT-G-CGAACACCTC-TGCTC---G----TTC------TG-AT-------TGT-T-ATATC--AT--------TA-CACG---------TG-TTCG---CCT----TCCATTG-TAT------G-TAC---C-----GTT----------------------ATTGA--TTCTC-TCGACCTAGTCAGATGAC----CATTTTAT-ACCCAT-GC-TTGC------TACTC-GTA---CG-T----ACC-TGA---GT-AGGT---T----TT
gi|1 : -C---AT-GAGT-----TT----AATTTG--TGTGCT--TGTTTGTTC-AGCGATTA------ACTTTA---TTAATA------ACGTTTAT----A----A-------A--AAAA-----A---ATC----GACATTAATTTAT-G-CATGC-TT-TTTATTTTT-CATGTTTTTCAA-TGCA-TTTAT-C-TTC-G-ATT----GTT--TTGCA---GTTTTATTTT--ATCTGCA-TCAA-T--GTA-TGA-AG-AAAT----ACA---CTGA-TT--A-CTTA-AATGCACATGCACA------TG-------AAA-TAT-GAT-GGCAT-TA---CAAAAT-GTTGAATAG----------TGT-TT-CTGTTGT-A-CGGCACACA-TATAAAGAA---ATAA-ATCTAAC-ATTAT---CCATA-AT-GAATTTA-TTT--GCAAA--AAGTAGA-AAT---ATAGA-TCG-CGAGATCATTGAA--ATCGCGAACGACCCACC-TCGC-GAATC-AACACGGAA---TTAAATCTATCGCGAATAATAAgtgtattcaatgaattgttacctgtaattgtcgattgtcgttctataatcactttcataatcgtgtggtcttgtcatgagtttaatttgtgtgcttgtttgttcagcgattaactttattaataacgtttataaaaaaaaatcgacattaatttatgcatgctttttatttttcatgtttttcaatgcatttatcttcgattgttttgcagttttattttatctgcatcaatgtatgaagaaatacactgattacttaaatgcacatgcacatgaaatatgatggcattacaaaatgttgaatagtgtttctgttgtacggcacacatataaagaaataaatctaacattatccataatgaatttatttgcaaaaagtagaaatatagatcgcgagatcattgaaatcgcgaacgacccacctcgcgaatcaacacggaattaaatctatcgcgaataataagtgatctacag
gi|10 : gtagttcacttaattttcgcgagtatttcattgcgcgttggtagggtgcggtgtttatttgcaaatatcataattcgaaaggatacagttaaaaataacgtatattttgcgaacacctctgctcgttctgattgttatatcattacacgtgttcgccttccattgtatgtaccgttattgattctctcgacctagtcagatgaccattttatacccatgcttgctactcgtacgtacctgagtaggttttgtgtattcaatgaattgttacctgtaattgtcgattgtcgttctataatcactttcataatcgtgtggtcttgtCTGTAGA-TCACTTA-TTTT--TCG-CG-GG-T-AT-T--TT-ATTTT-CACGTTT-ACACTGTCTGG-TGTT-T-----------------------A-TTC-GC--GAGAACACAG--TTAAG-AA-T--AACT-TA-TATTTT-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AC-------CGT-A-ACGTC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----TTT----------------------ATTGA--AGTTA-TTGACCTATTCAAATGAC----CAATTTAT-CCCCAT-GG-TCGC------TTTAG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAATTG-AT--TGAAGAAA---A--CG--CCTCACCG----CTAAGCCTCGT-GG-CAATCGCAA---------T-GAGT-----TT----AAATAG--T----T--TGTTTGTAA-AGCGATTA------CCTTTA---TT--T-------A------T----A----A-------A----AA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TGTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATG--TAGTACTTATTTTATGTTCCATGTACA-TCGA-T--GTA-TGA-GA-AAAC----ACA---CCTA-TT--A-CT-A-ACTGCACAGGTGCA------TT-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTCAATAGTG-------TTGT-TT-CTGGTGT-G-CAGTACA------AAAG-------------TGAG-ATTAT---CCG----T-GGATTTA-TTT--TCAAA--Agtgatctacag
gi|11 : aAATACAG--TTAAA-A--T--AACT-TA-TATTTC-G-CTATTAAATC-CGCTCCT-GCAT-TCA------TG-AT-------CGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TGT------G-GAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAATGACCATGCAGTTTAT-ACCCAT-GC-TTGC------TATTG-GTA---AT-T----ACT-CGA---GT-ATTT---T----TTAT-TAACTG-AT--TGAAGACA---G--TG--CCTCACCG----TTGTGCCTCGT-GA-CAATCGTACTGA-CATTAT-GAGT-----TT----AATTTG--T----T--TGTTTATAA-AGCGATTA------GCTTCA---TT--TAATGTGTA------T----G----A-------A--AGAA-----AC--ATC----TGCAATAAGTTTT-G-TTAGC-TT-ATT--TTGT-CATGTTCTTCGA-TAAA-TATAT-G-CTT-G-GTT----ATA--TAACA---GTTTTATTTA--ATATAAA-TCGA-T--GTA-TGA-GG-GACA----ACA---TCAA-TT----CT-A-ACTGCACAGGTCCA------TG-------TAA-TAT-GAT-TGCGA-TG---AAAAAT-GTTGAATAGCG-------TTAT-TT-CTGGTGT-G-CGGTACACA-TATAAAGAA---ATCA-AT
gi|12 : CTATAGA-TCTCTTA-TTTT---CA-CG-AA-T-AT-T--TT-A-ATT-CGCGTTTA-CATGGTCCGT-TATT-TA---ATC-GCT--AA-TACAATAA-TTT-GC--GGGAATACAG--TTAAA-AA-T--AAC---A-TATTTC-G-CGAATAGATC-CGTTTCT-TCAT-TTA------TG-AT-------TAT-A-ATGTC--AC--------TA-CATC---------TC-TACG---TCT----T----TG-TAT------G-TAC---C-----ATT----------------------ATTGA--ACTTA-TCGATTTATTCAAATGAC----CAGTTGAT-ACCCAT-GC-TTGC------TATTT-GTA---TT-T----AAT-TGA---GT-AG-T---T----TTAT-TAACTA-GT--TGAAT-TAT--A--CG--CCTCACCAATATATATGCCTCGT-GG-CAATCGTGATGG-C---AT-GCGT-----TT-----AT-----T----T--TCTTTGTAA-AGCAATTA------TCTTTA---TT--TAATGTTTA------T----A----A-------A--AGAA-----ACATA------TACAAT-ATTTCT-A-TAA-C-TTAATT--TTTT-CTTATTCTTCAA-TAAA-TATGT-G-TTT-G-TTG----ATA--TAGCA---GTTTTATTTT--ATTCACA-TCGA-T--GCA-TGA-TG-GAGT----ACA---CCAA-TT--att
gi|13 : ttaCTGTAGA-TCACTTA-TTTT--TCA-CG-AG-T-AT-T--TT-A-TTT-CACGTTTA-CGCGGTCTAG-TGTT-TA---TTC-GAG--AA-TACAATAA-TTC-GG--GAGAACACCG--TCGAA-AA-T--AACT-TT-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AC-------CGT-A-ATGCC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAACCGC----CAGTTGAT-ACCCAT-GT-T----------------------T-T----AGT-TGA---GT-AGTT---T----TTAC-TAA-TGCAT--TGAAGAAA---A--CG--CCTCACGG----CTGAGCCTCGT-AG-CAATCGTAA---------T-GAGT-----TT----GAATAG--T----T--TGTTTGTAA-AGCGATTA------TCTTTA---TT--T-------A------T---------A-------A--AGAA-----ACATATC----TGCAATAATTC-----TAAGC----ATT--TTTT-Cct
gi|14 : ataG-CAATCGTAA---------T-GATT-----TT----AATTTG--T----T--TGT
gi|14 : TC----TGCAATAATTTTT-GCTTAGC-TT-ATT--TTTT-GATGTTCTTAAA-TATA-TATACAG-TTT-G-G-A----ATG--TAGCA---G-TTTATCTT--ATTTACATTCGA-T--GGA-TGAGGG-AAAT----AAA---CCAA--A--A-CT-A-ACTGCACATGTGCA------TG-------TAA-TGTGGAT-GGCGA-TG---AAAAAT-G-TGAATAGCG-------TAGT-TT-CTGGTGT-G-CGTCACA----ATAAAGAA---ATAG-ATGTGAG-ATTGT---CCGTG-AT-GGATTTA-TTT--TC-AA--AAGTAGA-AAT-------A-ACG-CGAGATA-TTGAA--TTCGCGAA-GACTCGTCTTCGCGGAATT-AACGCGGAAAATACAAATCTCT-GCGAATAATAAaatgtttctgcaataatttttgcttagcttattttttgatgttcttaaatatatatacagtttggaatgtagcagtttatcttatttacattcgatggatgagggaaataaaccaaaactaactgcacatgtgcatgtaatgtggatggcgatgaaaaatgtgaatagcgtagtttctggtgtgcgtcacaataaagaaatagatgtgagattgtccgtgatggatttattttcaaaagtagaaataacgcgagatattgaattcgcgaagactcgtcttcgcggaattaacgcggaaaatacaaatctctgcgaataataagactttagtgatctaca
gi|15 : gcaatcgtaatgattttaatttgtttgtaatgtt-CGTTGCT-GTGC-TTA------TA-AT-------TGT-A-AAACC--AC--------TA-CATA---------CG-TGCGCTTTCTA---T----TA-TAA------G-TAC---C-----GTTTAAT------------------ATTGA--GTTTA-TCGACCTACTTGGATGAC----CAGTTTAT-ACCCAT-GC-TTAC------CACTG-GTA---AT-T----ACTCTGACAGGT-AGTT---T----Tgactttagtgatctaca
gi|15 : TAACGA-T---AC-GAGT-----TTTTAAAGTGTG--T----T--TGTTGACAC-AGTAATTATA----ACTTTA---TT--TA------A------T----G----GGTTTTTTA--AAAA-----A---ATC----TGCAATAATGTAT-G-CATGC-TT-AGT--ATCT-TATacgcattagatgaatttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgcttaacgatacgagtttttaaagtgtgtttgttgacacagtaattataactttatttaatgggttttttaaaaaaatctgcaataatgtatgcatgcttagtatcttatt
gi|16 : cgttgctgtgcttataattgtaaaaccactacatacgtgcgctttctattataagtaccgtttaatattgagtttatcgacctacttggatgaccagtttatacccatgcttaccactggtaattactctgacaggtagttttacgcattagatgaatttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgctAACACAG--TTAAA-AA-T--AACT-TA-AATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAATTAC----CACTTTAT-ACCCAT-GC-TTGCTAAATGTACAG-GTA---AT-T----TCT-TGG---GT-AAAT---T----TTAC-TAATTG-AA--TGAAGAAA---A--CG--CCTCACCG----CTGAGCCTCGT-t
gi|17 : -GTTTAATAG---------TTGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTAT---CTGTA-ATGGGGTTTA-TTT--
gi|17 : -ATTAT---CTGTA-AT-GGATGTA-TTT--GCAGAG-AAGTA---AAT---A---ATACG-CAAGATATTTGAAAATTTACGATCGACCCGTT-TCAC-GAATT-AACACGGAA---ATTGATATCTAGCGAGTAttttattttttctatattatctgtaatggatgtatttgcagagaagtaaataatacgcaagatatttgaaaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgagtacgtaatctaca
gi|18 : gtttaatagttgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttttattttttctatT-GTTTAATAG----------TGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTAT---CTGTA-ATGGGGTTTA-TTT--cgtaatctaca
gi|18 : -ATTAT---CTGTA-AT-GGATGTA-TTT--GCAGG--AAGTAGA-AAT---G---A-ACG-CAAGATATTTGAA--TTTACGATCGACCCGTT-TCAC-GAATT-AACACGGAA---ATTGATATCTAGCGAATAttatttttctatattatctgtaatggatgtatttgcaggaagtagaaatgaacgcaagatatttgaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgaatacgtaatctacact
gi|19 : tgtttaatagtgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttatttttctatTT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-GCGTT----ATGATTAGCA---GTTTTATTTT--CTTTACA-TCGATT--GAATTGC-GGAAAAT----ACA---CCAAGTT--A-CA-A-ACTGCACAAGTGCA------TGTACATGTTAA-TAT-GAT-GGCGATTG---TAAAAT-ATTGAATAGTG-------TT-T-TT----GTGT-GACGGTACACATTATAAcgtaatctacact
gi|2 : TCCTGTAGA-TCACTTA-TTTTA-TCG-CG-GG-T-AT-A--TA-A-TTT--GCGTCTAACAC-GCCTGG-TGCT-TA---TTCTGCG--AA-TACAATAA-TTC-GC--GAGAATATAG--TTAAA-AA-T--AACT-TT-TATTTC-G-CCAATAGATC-AGCTCCT-GCAT-TTA------TG-AT-------CGC-A-ATGTC--AC--------TA-CGTG---------TGCTACG---TCT----T----TG-TAT------GCTA----C-----GTT----------------------ATTGA--TTTTA-TCGACCTATTGAAATGAC----CAGTTTAT-ACCCAT-GC-TTCC------TACTG-GTA---AT-T----TCG-TGA---GT-AGAT---T----TTAC-TAATTG-AT--TGAAGACA---A--TG--CCTT-CCG----CTGTGCATCGT-GG-CAATCGCATTGG-C---AT-GCGT-----TT----AATTTG--T----T--TGTTGGTAA-AGCAATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTATT-G-TAAGC-TT-ATT--TTTT-AATGTTCTTCAA-GAAA-TACAT-G-TTC-G-GTT----ATA--CAACA---GTTTTATTTT--ATCTACA-TCAA-T--GTA-TAC-AG-AAAT----GCA---TCAA-TT--A-CT-A-ACTGTACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAACAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGTACACA-TATAAAAAT---ATAA-ATTTGAG-ATTTT---CTGTA-AT-TGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ATC-CGAGATATTGGAA--TTTGCGAATGACCTGTA-TCGC-TAATT-AACGCGAAA---ATAAATCTCTTGCAAATAATAA
gi|20 : T-A-ACTGCACAGGTGCAAGTACATG-------TAA-TAT-GAT-GACGA-TG---AAAAAT-GTTGAAATGCG-------TTGA-TT-CTGGTGT-G-CTTTACAAA-TTTAAAGAA---ATAA-ATGTAAG-ATTAT---CCATG-AT-GGATTTA-TTT--TCAAA--AAATAGA-AAT---A---A-ACG-CG
gi|21 : gaaatacacaggtgcaagaattattactacatg-GG-AAATGGTTACA---GCAG-AT--A-C--G-ATTGCA-AGGTACAA-----TG-------TAAGTAT-GATAGGTTA-AGTAAAAAAAT-GTTGAATA-----------TGTGTT-CTGGTGTAA-CAGCAC-----------------TAACATTTGAGAATTAA---CCGTAGAT-GGATTTA-TTTG-GCAGGGCAAG-AGA-AACGCAA---A-ACGTCGAG
gi|22 : AATGCAG--TTAAA-AA-T--AACT-TA-TATTTC-G-C-------------------CAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TG-CATGTGTACAAAATG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTTAA--------------------ATTGA--ATTTccaaatatat
gi|23 : A--AAGTAGA-ATT---A---A-ACG-CGAGATATTTGAA--ATAACGAACAACCCATC-TTGC-GAATT-AATGCGGAA---TCAAATCTCTCACAAA-AATAA
gi|23 : GTTGA-TCACTTA-TTTT--T-G-TG-AGAG-AT-T--TG-A-TTC-CGCATTgtgatcaac
gi|24 : aaagtagaattaaacgcgagatatttgaaataacgaacaacccatcttgcgaattGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTTTCATACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTATCGCGAATAATA
gi|24 : AGA-TCACCTA-TTAT--TCG-CG-A--T-AGAT--TT-A-TTTCCGCGTTggtgatct
gi|25 : gtagaaataaacgcgagatatttgaattttcatacgacccgtctcgcgaattTTCTGTAAA-TCACTTA-TTTT--TCG-CG-AG-T-AC-T--TT-A-TTT-CGCATTT-ATAGGATCCAG-TGTT-TA---TTC-GAG--AA-TTCAATAA-TT
gi|26 : TGTAGA-TCACTTGTTTTT--TCG-CA-AG-T-AT-TTATT-A-TTT-TGCGTTT-GTAGGATGTGGTTGTT-TA---TTC-GCA--AA-t
gi|27 : gtA-ATGCGAG-ATTAT---CCGTG-AT-GGATTTA-TTT--TCAAA--Aattcat
gi|3 : CTGTCGAATCACTTA-TTTT--TCAACG--G-T-AT-TG-TT-A-TTT-----TTCAAT----TACAG-TGT---------------------CAATTA-TTC-GC--GAAAATACAG--TTTAA-AT-T--AACT-TA-TATTTT-G-CGAATTGATC-AGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATATC--AT--------TG-CTTT---------TG-TACG---TCT----T----TG-TATATATATG-TAT---C-----GTT----------------------ATTGA--TTTTA-TCGACTAAAACTAATGAC----AAGTTTCTTACCCAT-GC-ATAA------TACTG-GT----------------------------T---T----TTACGTATCAG-AA---GAAGACGTGTA--CGACCCCCACCG----CTGTTATTTGT-GG-CA-TCATAACGG-C---GT-GAGT-----TT----CATTTG--T----T--TGTTTGCAA-AGCCATTATATGTAGATCTA---TC--TA------A------T----G----ATCAT---AGTAGAA-----AAATATC----TTCAATAACTTTT-G-TAAGC-TT-ACA--TTTT--ATGTTCTTCAA-TAAA-TATAT-A-TTC-T-GTT----ATA--TAGCA---GTATTATTTT--ATTTGCA-TCGT-T--GTA-TGA-GA-GAAT----ACA---TCGA-TT--A-CT-A-ACGGCACAGGTGCA------CA-------TAA-ATT-GTT-GGTGA-TG---AAAAAT-GTTGAACAGTG-------TTGT-TT-CTGGTAT-G-CGGTACACA-TATAGAGAA---G-GG-ATCTGAA-ATAAT---CCGCA-AT-GAATTTA-TTT--GCAAA--AGCCAGA-GAT---G---A-GAG-CGATATATTTGAC--TTCCCGAATGA-CCATC-TCAC-GAATT-AACGCACAA---ATAAATCTCTCCCAAATAA
gi|4 : taaCTTA-TTTT--TCGACATAG-TCAT-T--CT-A-TTTTCGCGTTTA-CAGGGTCAGT-TGTT-TAGTGTTT-GTGTCAA-TACAATAA-TCCTTT--GAATATATAG--TTAAG-AACT--AGCT-TAGTATTTT-GACCAA--------GCTTTTAGCAT-TTA------CACATATATTGCCGT-ACATATCA-AC--------TACCTTG---------TG-TAGA---CCTTCAAT----TGTTAT------G-TACCTAC-----GTT----------------------A-TGA--TTCTACTCGTCGAATCAAAATGAA----CAG-TTAC-A-CCAT-GC-TTGC------TGCTG-ATA---AT-TATTAATT-TGA---TT-ATTT---T----TTAC-TTA-TA-AA--TGAAGACC---A--TGC-CCTCATT-----TTGTCTCTCAT-GG-TAATCTTAACGG-T---GT-GAAT-----TT----A--TTA--T----TTATATTTGCAA-
gi|4 : actacgtgaagctctatATATT----TGCAATAATTTTTTG-TAGGC-TT-ATT--TTT--CAT-TTCTTCA--TAAA-TATTT-TCTTC-G-GTT----ATA----GCA---GTTT-ATTTT----CTACA-TCGA-T--GTT-TGA-G--ACAC----ACA---TCAA-TT--G-GG-A-ACGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAATAGTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGC-CAAA--ATAAAGAA---AGAA-ATTTGAG-ATTAT---CAGTA-AT-GGATTTA-TTT--GCTAA--ATGTAG--AAT---T---A-ACT-CATGATATTTGAA--TTCGCGAACGACCCGTT-TCAG-GAACT-AGCGCGGAA---ATAAtaattttttgtaggcttatttttcatttcttcataaatattttcttcggttatagcagtttattttctacatcgatgtttgagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatagttgaacagcatgttgctggtggacggccaaaataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataatatgatataca
gi|5 : actacgtgaagctctatcttatttttcgacatagtcattctattttcgcgtttacagggtcagttgtttagtgtttgtgtcaatacaataatcctttgaatatatagttaagaactagcttagtattttgaccaagcttttagcatttacacatatattgccgtacatatcaactaccttgtgtagaccttcaattgttatgtacctacgttatgattctactcgtcgaatcaaaatgaacagttacaccatgcttgctgctgataattattaatttgattattttttacttataaatgaagaccatgccctcattttgtctctcatggtaatcttaacggtgtgaatttattatttCTGTGGA-TTACTTA-TTTT--TCG-CA-AG-T-AA-T--TT-A-TTT-CGCGTTTA-CAGGGTCCAG-TGTT-TA---TTT-GCG--AA-TACAATAA-TTT-GC--AATA-TATAG--TTAAA-AC-T--AGCT-TA-TATTTT-G-CAA---------GCTTTA-GCAT-TTACACATATG-AT-------CGT-A-ATATC--AC--------TA-CCTG---------TG-TACG---CCT----TCCATTG-TAT------G-TAC---C-----GTT----------------------ATTGA--TTCTA-TCGATCGAATCAAATGAA----CAGTTTAC-ACCCAT-GC-TTGC------TGCTG-ATAATTAT-T----ATT-TGA---TT-ATTT---T----TTAC-TTATCA-AA--TGAAGACC---A--CG--CCTCATCT----TTGTCTCTCAT-GG-TAATCTTAACGG-T---GT-GAAT-----TT----A--TTA--T----TTATATTTGCAA-taatatgatataca
gi|5 : taATATT----TGCAATAATTTTT-G-TAGGC-CT-ATT--TTT--CATGTTCTTCAA-TAAA-TATTT-C-TTC-G-GTT----ATA----GCA---GTTTTATCTT--ATCTACA-TCGA-T--GTT-TGA-AG-ACAC----ACA---TCAA-TT--G-GG-A-ACGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAAT-GTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGCACAAA-TATAAAGAA---AGAA-ATTTGAG-ATTAT---CAGTA-AT-GGATTTA-TTT--GCTAA--ATGTAGA-AAT---T---A-ACT-CATGATATTTGAA--TTCGCGAACGACCCGTT-TCAG-GAACT-AGCGCGGAA---ATAAtaatttttgtaggcctatttttcatgttcttcaataaatatttcttcggttatagcagttttatcttatctacatcgatgtttgaagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatgttgaacagcatgttgctggtggacggcacaaatataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataaatgatatacagta
gi|6 : tactgtggattacttatttttcgcaagtaatttatttcgcgtttacagggtccagtgtttatttgcgaatacaataatttgcaatatatagttaaaactagcttatattttgcaagctttagcatttacacatatgatcgtaatatcactacctgtgtacgccttccattgtatgtaccgttattgattctatcgatcgaatcaaatgaacagtttacacccatgcttgctgctgataattattatttgattattttttacttatcaaatgaagaccacgcctcatctttgtctctcatggtaatcttaacggtgtgaatttattatttTTCTGTAGA-T-ACTT--TTTT--TCG-CT-AG-T-AT-T--TT-C-TTT-CCCGTT---CACAGGTCGA-TGTT-TC---TTC-GCG--AA-TACTATAA-ATC-GA--GAGAATAGGT--TTAAACAA-TGAGATT-AA-TATTTC-G-CGAATACA-C-CAATACT-GTAC-GTA------TG-AT-------TCTAA-ATATT--ACATTTAGTATA-CGTG---------TG-TAAG---CCT----TCC--TC-TAC------G-T------------TT----------------------TTTGGTTTTTTACTCAACCTATTTAtaaatgatatacagta
gi|6 : gGAAGTTA---G--CA--GCTCGCCG----CT-CGTCTCAG-GGTCTCTTTTAACGGAT---AT-GAGTGGCAATT----AGTT-G--TGGA-T--TGTTTGTAGCAGCGATTA------GCATTA---TC--TA------A------T----ATCCTA-------A--AAAC-----AGAAAT-----TGCCACAATTTAT-A-T---CGTT-A-T--CATT-CAAAGTCTGCA--------ATAT-G-TTT-G-ATT----ATC--TGG---------TATTT----CCCATA----A-C--GTA-CGA-AG-AAACTA--ACA---TATA-TT--A-CT-ATTCTCCATAGGTAC-------TG-------TAACTAA-AAT-GG-AA-TG---CTAAAT--TTGAATAGC----------GT-TT-CTGGTCT-G-AATCACTTA-TAC-GAGAA---ATAA-ATTTGAG-ATTGTTTGCAGTA-AT-GTTTGTA-TTTTGGC-AA--GAGTAAATAAT---A---G-ATA-CGAGATACTTTGA--TTTGCATAGG--CCGTT-TAAA-GAATTAAACAAAGAA---CAAAA--TCTTGCAAATGAAAAtaacgtatacaagaagttagcagctcgccgctcgtctcagggtctcttttaacggatatgagtggcaattagttgtggattgtttgtagcagcgattagcattatctaatatcctaaaaacagaaattgccacaatttatatcgttatcattcaaagtctgcaatatgtttgattatctggtatttcccataacgtacgaagaaactaacatatattactattctccataggtactgtaactaaaatggaatgctaaatttgaatagcgtttctggtctgaatcacttatacgagaaataaatttgagattgtttgcagtaatgtttgtattttggcaagagtaaataatagatacgagatactttgatttgcataggccgtttaaagaattaaacaaagaacaaaatcttgcaaatgaaaaag
gi|7 : gttctgtagatactttttttcgctagtattttctttcccgttcacaggtcgatgtttcttcgcgaatactataaatcgagagaataggtttaaacaatgagattaatatttcgcgaatacaccaatactgtacgtatgattctaaatattacatttagtatacgtgtgtaagccttcctctacgttttttggttttttactcaacctatttataacgtatacaaCTGAAG--TCACTTA-TTTTATTCG-CG-AG-T-AT-T--TTTA-TTTTCACGGTTACCATCGTCCCG-GGTTATA---TTC-ACG--AAAGACAATAAATTC-ATCAAAAAATACAGAATTAAG-AA-T--AACTATA-TATTTCAG-CGAATAGATC-CGCTCCT-GCATGTTA------TG-CA-------CGT-A-ATGTCCAAC--------TA-CATGAGTA-----TG-TACA---TCT----T----TT-TAT------G-TAC---C-----GTT----------------------ATTGA--------------------AAT------------TAT-ACC-AT-GC-TTTC------TAGTGAGTAG--ATCT----ACT-TGA---GTTAGTTGTGT----TTAC-TAACTG-ATATTGAGGACA---AAACGGGCCTAAC-G----CTGTGCCTCGTTGG-CAATTCTAATGA-C---TTTGAGT-----TT----A---TGATT----T--TGCTTGTAA-AGCGATTC------GCTCTA---TT--TA------A------TGTTTA----AT------A--AGAACATCAACATATC----TGCAATAATTTTT-G-TAAGGATT-ATT--TTTTTCAAGTTCTTCAAATAAAGTATAT-G-TTCAG-GTT----ATA--TAGCA---GTTTTATTTC---TTTACA-TCGA-TCTGTA-TGA-GT-GAAT----AAAATGTCAA-TTCTATCT-A-ACTACACAGGTGCA------TG-------TAA-TAT-GAT-GGTGA-TG---ACGAAT-GTTGAATAGCAGGTTTT-TTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTATTTT--GCAAA--ag
gi|8 : aAATACAG--TTAAC-AA-G--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TCG------TG-AT-------CGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TAT------G-TAG---CTTTTAATT----------------------ATTGA--ATTCA-TCGACTTATTCGAATGAC----CAGTTTAT-ACCCATTGTATTGC------TATTG-GTA---TT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAAACA---A--TG--TCTCACCG----CTGTGCCTTGT-GA-TAATTGTAATGG-C---AT-GAGT-----TT----AATTTG--T----A--TGTTTGTAA-AGCGATTA------GCTTTAATGTT--TAT-----A------T----A----------------GAA-----ACGTATCAGTCTGCAATAATTTTT-G-TTAGC-TT-ATT--TTAT-CATGTTCTTCAA-TAAA-TATAT-G-TTT-G-GTTTAATATA--TAGCA---GTTA-ATT----ATATACA-TCGA-T--GCA-TGA-GG-AAAT----ACA---TCAA-TT----CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGTG-------TTTT-TTTCTGGTGT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---ATGTA-AT-GGATTTA-TTT--GGAAA--AAGTAGA-AAT---A---A-ACG-CGATATATTTGAA--TTAGTGAACGACCCGTC-TCGT-GAAT
gi|8 : CTGTAGA-TCACTTA-TTAT--TCA-CG-AG-aataagtgatctacagta
gi|9 : aatacagttaacaagaacttatatttcgcgaatagatccgctcctgcattcgtgatcgtaatgtcactacatgtgtacgtctttgtatgtagcttttaattattgaattcatcgacttattcgaatgaccagtttatacccattgtattgctattggtatttacttgagtagtttttactaactgattgaaaacaatgtctcaccgctgtgccttgtgataattgtaatggcatgagtttaatttgtatgtttgtaaagcgattagctttaatgtttatatagaaacgtatcagtctgcaataatttttgttagcttattttatcatgttcttcaataaatatatgtttggtttaatatatagcagttaattatatacatcgatgcatgaggaaatacatcaattctaactgcacaggtgcatgtaatatgatggcgatgaaaaatgttgaatagtgtttttttctggtgtgcggtacacatataaagaaataaatttgagattatatgtaatggatttatttggaaaaagtagaaataaacgcgatatatttgaattagtgaacgacccgtATACAG--TTAAG-AA-TT-AACT-TG-TATTTC-A-TGAATAGATCTCCCTCTT-GCAT-TTA------TG-AT-------TGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTTCAAATGTCTCATATGTTCAAATGTTGA--ATTTA-TCGACTTATTGAAATGAC----CAGTTTAT-ACCCAT-GT-CTGG------TAGTG-GTA---AT-T----ACT-T-A---TT-GCCT---TGTAATTACGTTACTG-AT--TGACGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCATAATGA-C---TT-GAGT-----TT----AA------T----T--TGTTTGTAA-AGCGATTC------CCTTTA---TT--TAATGTTTA------T----A----A-------G--AGAA-----AC--ATC----TACAATAATTTTT-G-TAAGG-TT-ATT--TTTT-CAAGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----Ata
gi|9 : CACAGGTGCA------TG-------TAA-TAT-GAT-GACGG----------AT-GTTGAATAGCGGGTTTTTTTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAA-ATTAT---CCGTA-AG-GGATTTA-TTTT-GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTAGCGAATGACCCGTC-TCAG-GAATT-AACGCAGAA---ATAAATCTCTCGCGAATAATAAacacaggtgcatgtaatatgatgacggatgttgaatagcgggtttttttttttctggtttgcggtacacatataaagaaataaatttgaaattatccgtaagggatttattttgcaaaaagtagaaataaacgcgagatatttgaattagcgaatgacccgtctcaggaattaacgcagaaataaatctctcgcgaataataagtgacct
Alignments
lowQualScore : 222 111111111 111111111 1111 3333333333333333333333 11 111111111 1111111 1111111 5555555555555555555555555555555 1111 111111 222222222
lowQualScore : 2 2 66 5 2 2 2 2 66 2 2 8 000 66 3 3 555 3 44 3 3 4 666 33 2 2 66 2 2 2 2 2 2 2 777777 2 8888888 2 2 55 000000000 444 555555555 2 444 7777 4444 2 777777 2 444 66666 0000000000000000000000 666 5 0 6666 2 2 2 888888 2 777 2 6666 2 555 2 22 555 6666 6 3 3 44 888 44 11 6666 3 3 0 555555555 2 66666 7777777 0 33 0000000 2 5555555 555 44 4444444444444444444444444444444 44 88888 55 5555 0 2 2 5 2 33 2 2 2 2 2 2 2 6666 44 555 666 1 3 3 44 3 2 2 0000 555 2 7777 2 2 000000 8888888 5 2 2 2 444 2 000000000 2 2 1 2 2 2 2 888 2 0 2 333 2 4 2 77 0 55 2 9999999 2 2 44 1 3 3 3 555 3
lowQualScore : . . .. . . . . . .. . . . ... .. . . ... . .. . . . ... .. . . .. . . . . . . . ...... . ....... . . .. ......... ... ......... . ... .... .... . ...... . ... ..... ...................... ... . . .... . . . ...... . ... . .... . ... . .. ... .... . . . .. ... .. .. .... . . . ......... . ..... ....... . .. ....... . ....... ... .. ............................... .. ..... .. .... . . . . . .. . . . . . . . .... .. ... ... . . . .. . . . .... ... . .... . . ...... ....... . . . . ... . ......... . . . . . . . ... . . . ... . . . .. . .. . ....... . . .. . . . . ... .
lowQualScore : 9 7 33 3 7 7 9 9 88 9 9 6 888 99 3 3 888 3 66 3 6 0 222 77 7 7 33 7 7 7 7 5 5 5 222222 5 1111111 5 5 99 444444444 666 333333333 5 444 8888 1111 5 222222 5 444 22222 9999999999999999999999 999 3 8 1111 9 9 9 222222 9 999 9 1111 9 000 9 88 000 1111 7 7 3 66 555 22 55 5555 1 1 2 333333333 7 77777 9999999 9 77 4444444 9 2222222 888 66 2222222222222222222222222222222 66 33333 00 7777 5 7 7 3 7 44 5 9 9 9 9 9 9 1111 22 444 555 9 1 1 22 1 9 9 0000 000 9 9999 9 9 333333 7777777 3 7 7 7 777 4 111111111 4 4 2 4 4 7 4 888 4 8 2 999 2 4 2 55 4 66 7 1111111 7 7 22 9 1 1 3 888 2
consensus : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AG-T-AT-T--TT-A-TTT-CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--NTTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGG-C---GT-GAGT-----TT----AATTTG--T----T--TGTTTGTAA-AGCGATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGA-T--GTA-TGA-GG-AAAT----ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
Reference ( family-3358 ) : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AG-T-AT-T--TT-A-TTT-CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--NTTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGG-C---GT-GAGT-----TT----AATTTG--T----T--TGTTTGTAA-AGCGATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGA-T--GTA-TGA-GG-AAAT----ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
gi|1 : GTAGT-TCACTTA-ATTT--TCG-CG-AG-T-AT-T--TC-A-TTG-CGCGTT-GGTAGGGTGCGG-TGTT-TA---TTT-GCA--AA-TATCATAA-TTC-GA--AAGGATACAG--TTAAA-AA-T--AACG-TA-TATTTT-G-CGAACACCTC-TGCTC---G----TTC------TG-AT-------TGT-T-ATATC--AT--------TA-CACG---------TG-TTCG---CCT----TCCATTG-TAT------G-TAC---C-----GTT----------------------ATTGA--TTCTC-TCGACCTAGTCAGATGAC----CATTTTAT-ACCCAT-GC-TTGC------TACTC-GTA---CG-T----ACC-TGA---GT-AGGT---T----TT
gi|1 : -C---AT-GAGT-----TT----AATTTG--TGTGCT--TGTTTGTTC-AGCGATTA------ACTTTA---TTAATA------ACGTTTAT----A----A-------A--AAAA-----A---ATC----GACATTAATTTAT-G-CATGC-TT-TTTATTTTT-CATGTTTTTCAA-TGCA-TTTAT-C-TTC-G-ATT----GTT--TTGCA---GTTTTATTTT--ATCTGCA-TCAA-T--GTA-TGA-AG-AAAT----ACA---CTGA-TT--A-CTTA-AATGCACATGCACA------TG-------AAA-TAT-GAT-GGCAT-TA---CAAAAT-GTTGAATAG----------TGT-TT-CTGTTGT-A-CGGCACACA-TATAAAGAA---ATAA-ATCTAAC-ATTAT---CCATA-AT-GAATTTA-TTT--GCAAA--AAGTAGA-AAT---ATAGA-TCG-CGAGATCATTGAA--ATCGCGAACGACCCACC-TCGC-GAATC-AACACGGAA---TTAAATCTATCGCGAATAATAAgtgtattcaatgaattgttacctgtaattgtcgattgtcgttctataatcactttcataatcgtgtggtcttgtcatgagtttaatttgtgtgcttgtttgttcagcgattaactttattaataacgtttataaaaaaaaatcgacattaatttatgcatgctttttatttttcatgtttttcaatgcatttatcttcgattgttttgcagttttattttatctgcatcaatgtatgaagaaatacactgattacttaaatgcacatgcacatgaaatatgatggcattacaaaatgttgaatagtgtttctgttgtacggcacacatataaagaaataaatctaacattatccataatgaatttatttgcaaaaagtagaaatatagatcgcgagatcattgaaatcgcgaacgacccacctcgcgaatcaacacggaattaaatctatcgcgaataataagtgatctacag
gi|10 : gtagttcacttaattttcgcgagtatttcattgcgcgttggtagggtgcggtgtttatttgcaaatatcataattcgaaaggatacagttaaaaataacgtatattttgcgaacacctctgctcgttctgattgttatatcattacacgtgttcgccttccattgtatgtaccgttattgattctctcgacctagtcagatgaccattttatacccatgcttgctactcgtacgtacctgagtaggttttgtgtattcaatgaattgttacctgtaattgtcgattgtcgttctataatcactttcataatcgtgtggtcttgtCTGTAGA-TCACTTA-TTTT--TCG-CG-GG-T-AT-T--TT-ATTTT-CACGTTT-ACACTGTCTGG-TGTT-T-----------------------A-TTC-GC--GAGAACACAG--TTAAG-AA-T--AACT-TA-TATTTT-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AC-------CGT-A-ACGTC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----TTT----------------------ATTGA--AGTTA-TTGACCTATTCAAATGAC----CAATTTAT-CCCCAT-GG-TCGC------TTTAG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAATTG-AT--TGAAGAAA---A--CG--CCTCACCG----CTAAGCCTCGT-GG-CAATCGCAA---------T-GAGT-----TT----AAATAG--T----T--TGTTTGTAA-AGCGATTA------CCTTTA---TT--T-------A------T----A----A-------A----AA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TGTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATG--TAGTACTTATTTTATGTTCCATGTACA-TCGA-T--GTA-TGA-GA-AAAC----ACA---CCTA-TT--A-CT-A-ACTGCACAGGTGCA------TT-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTCAATAGTG-------TTGT-TT-CTGGTGT-G-CAGTACA------AAAG-------------TGAG-ATTAT---CCG----T-GGATTTA-TTT--TCAAA--Agtgatctacag
gi|11 : aAATACAG--TTAAA-A--T--AACT-TA-TATTTC-G-CTATTAAATC-CGCTCCT-GCAT-TCA------TG-AT-------CGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TGT------G-GAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAATGACCATGCAGTTTAT-ACCCAT-GC-TTGC------TATTG-GTA---AT-T----ACT-CGA---GT-ATTT---T----TTAT-TAACTG-AT--TGAAGACA---G--TG--CCTCACCG----TTGTGCCTCGT-GA-CAATCGTACTGA-CATTAT-GAGT-----TT----AATTTG--T----T--TGTTTATAA-AGCGATTA------GCTTCA---TT--TAATGTGTA------T----G----A-------A--AGAA-----AC--ATC----TGCAATAAGTTTT-G-TTAGC-TT-ATT--TTGT-CATGTTCTTCGA-TAAA-TATAT-G-CTT-G-GTT----ATA--TAACA---GTTTTATTTA--ATATAAA-TCGA-T--GTA-TGA-GG-GACA----ACA---TCAA-TT----CT-A-ACTGCACAGGTCCA------TG-------TAA-TAT-GAT-TGCGA-TG---AAAAAT-GTTGAATAGCG-------TTAT-TT-CTGGTGT-G-CGGTACACA-TATAAAGAA---ATCA-AT
gi|12 : CTATAGA-TCTCTTA-TTTT---CA-CG-AA-T-AT-T--TT-A-ATT-CGCGTTTA-CATGGTCCGT-TATT-TA---ATC-GCT--AA-TACAATAA-TTT-GC--GGGAATACAG--TTAAA-AA-T--AAC---A-TATTTC-G-CGAATAGATC-CGTTTCT-TCAT-TTA------TG-AT-------TAT-A-ATGTC--AC--------TA-CATC---------TC-TACG---TCT----T----TG-TAT------G-TAC---C-----ATT----------------------ATTGA--ACTTA-TCGATTTATTCAAATGAC----CAGTTGAT-ACCCAT-GC-TTGC------TATTT-GTA---TT-T----AAT-TGA---GT-AG-T---T----TTAT-TAACTA-GT--TGAAT-TAT--A--CG--CCTCACCAATATATATGCCTCGT-GG-CAATCGTGATGG-C---AT-GCGT-----TT-----AT-----T----T--TCTTTGTAA-AGCAATTA------TCTTTA---TT--TAATGTTTA------T----A----A-------A--AGAA-----ACATA------TACAAT-ATTTCT-A-TAA-C-TTAATT--TTTT-CTTATTCTTCAA-TAAA-TATGT-G-TTT-G-TTG----ATA--TAGCA---GTTTTATTTT--ATTCACA-TCGA-T--GCA-TGA-TG-GAGT----ACA---CCAA-TT--att
gi|13 : ttaCTGTAGA-TCACTTA-TTTT--TCA-CG-AG-T-AT-T--TT-A-TTT-CACGTTTA-CGCGGTCTAG-TGTT-TA---TTC-GAG--AA-TACAATAA-TTC-GG--GAGAACACCG--TCGAA-AA-T--AACT-TT-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AC-------CGT-A-ATGCC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAACCGC----CAGTTGAT-ACCCAT-GT-T----------------------T-T----AGT-TGA---GT-AGTT---T----TTAC-TAA-TGCAT--TGAAGAAA---A--CG--CCTCACGG----CTGAGCCTCGT-AG-CAATCGTAA---------T-GAGT-----TT----GAATAG--T----T--TGTTTGTAA-AGCGATTA------TCTTTA---TT--T-------A------T---------A-------A--AGAA-----ACATATC----TGCAATAATTC-----TAAGC----ATT--TTTT-Cct
gi|14 : ataG-CAATCGTAA---------T-GATT-----TT----AATTTG--T----T--TGT
gi|14 : TC----TGCAATAATTTTT-GCTTAGC-TT-ATT--TTTT-GATGTTCTTAAA-TATA-TATACAG-TTT-G-G-A----ATG--TAGCA---G-TTTATCTT--ATTTACATTCGA-T--GGA-TGAGGG-AAAT----AAA---CCAA--A--A-CT-A-ACTGCACATGTGCA------TG-------TAA-TGTGGAT-GGCGA-TG---AAAAAT-G-TGAATAGCG-------TAGT-TT-CTGGTGT-G-CGTCACA----ATAAAGAA---ATAG-ATGTGAG-ATTGT---CCGTG-AT-GGATTTA-TTT--TC-AA--AAGTAGA-AAT-------A-ACG-CGAGATA-TTGAA--TTCGCGAA-GACTCGTCTTCGCGGAATT-AACGCGGAAAATACAAATCTCT-GCGAATAATAAaatgtttctgcaataatttttgcttagcttattttttgatgttcttaaatatatatacagtttggaatgtagcagtttatcttatttacattcgatggatgagggaaataaaccaaaactaactgcacatgtgcatgtaatgtggatggcgatgaaaaatgtgaatagcgtagtttctggtgtgcgtcacaataaagaaatagatgtgagattgtccgtgatggatttattttcaaaagtagaaataacgcgagatattgaattcgcgaagactcgtcttcgcggaattaacgcggaaaatacaaatctctgcgaataataagactttagtgatctaca
gi|15 : gcaatcgtaatgattttaatttgtttgtaatgtt-CGTTGCT-GTGC-TTA------TA-AT-------TGT-A-AAACC--AC--------TA-CATA---------CG-TGCGCTTTCTA---T----TA-TAA------G-TAC---C-----GTTTAAT------------------ATTGA--GTTTA-TCGACCTACTTGGATGAC----CAGTTTAT-ACCCAT-GC-TTAC------CACTG-GTA---AT-T----ACTCTGACAGGT-AGTT---T----Tgactttagtgatctaca
gi|15 : TAACGA-T---AC-GAGT-----TTTTAAAGTGTG--T----T--TGTTGACAC-AGTAATTATA----ACTTTA---TT--TA------A------T----G----GGTTTTTTA--AAAA-----A---ATC----TGCAATAATGTAT-G-CATGC-TT-AGT--ATCT-TATacgcattagatgaatttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgcttaacgatacgagtttttaaagtgtgtttgttgacacagtaattataactttatttaatgggttttttaaaaaaatctgcaataatgtatgcatgcttagtatcttatt
gi|16 : cgttgctgtgcttataattgtaaaaccactacatacgtgcgctttctattataagtaccgtttaatattgagtttatcgacctacttggatgaccagtttatacccatgcttaccactggtaattactctgacaggtagttttacgcattagatgaatttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgctAACACAG--TTAAA-AA-T--AACT-TA-AATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAATTAC----CACTTTAT-ACCCAT-GC-TTGCTAAATGTACAG-GTA---AT-T----TCT-TGG---GT-AAAT---T----TTAC-TAATTG-AA--TGAAGAAA---A--CG--CCTCACCG----CTGAGCCTCGT-t
gi|17 : -GTTTAATAG---------TTGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTAT---CTGTA-ATGGGGTTTA-TTT--
gi|17 : -ATTAT---CTGTA-AT-GGATGTA-TTT--GCAGAG-AAGTA---AAT---A---ATACG-CAAGATATTTGAAAATTTACGATCGACCCGTT-TCAC-GAATT-AACACGGAA---ATTGATATCTAGCGAGTAttttattttttctatattatctgtaatggatgtatttgcagagaagtaaataatacgcaagatatttgaaaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgagtacgtaatctaca
gi|18 : gtttaatagttgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttttattttttctatT-GTTTAATAG----------TGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTAT---CTGTA-ATGGGGTTTA-TTT--cgtaatctaca
gi|18 : -ATTAT---CTGTA-AT-GGATGTA-TTT--GCAGG--AAGTAGA-AAT---G---A-ACG-CAAGATATTTGAA--TTTACGATCGACCCGTT-TCAC-GAATT-AACACGGAA---ATTGATATCTAGCGAATAttatttttctatattatctgtaatggatgtatttgcaggaagtagaaatgaacgcaagatatttgaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgaatacgtaatctacact
gi|19 : tgtttaatagtgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttatttttctatTT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-GCGTT----ATGATTAGCA---GTTTTATTTT--CTTTACA-TCGATT--GAATTGC-GGAAAAT----ACA---CCAAGTT--A-CA-A-ACTGCACAAGTGCA------TGTACATGTTAA-TAT-GAT-GGCGATTG---TAAAAT-ATTGAATAGTG-------TT-T-TT----GTGT-GACGGTACACATTATAAcgtaatctacact
gi|2 : TCCTGTAGA-TCACTTA-TTTTA-TCG-CG-GG-T-AT-A--TA-A-TTT--GCGTCTAACAC-GCCTGG-TGCT-TA---TTCTGCG--AA-TACAATAA-TTC-GC--GAGAATATAG--TTAAA-AA-T--AACT-TT-TATTTC-G-CCAATAGATC-AGCTCCT-GCAT-TTA------TG-AT-------CGC-A-ATGTC--AC--------TA-CGTG---------TGCTACG---TCT----T----TG-TAT------GCTA----C-----GTT----------------------ATTGA--TTTTA-TCGACCTATTGAAATGAC----CAGTTTAT-ACCCAT-GC-TTCC------TACTG-GTA---AT-T----TCG-TGA---GT-AGAT---T----TTAC-TAATTG-AT--TGAAGACA---A--TG--CCTT-CCG----CTGTGCATCGT-GG-CAATCGCATTGG-C---AT-GCGT-----TT----AATTTG--T----T--TGTTGGTAA-AGCAATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTATT-G-TAAGC-TT-ATT--TTTT-AATGTTCTTCAA-GAAA-TACAT-G-TTC-G-GTT----ATA--CAACA---GTTTTATTTT--ATCTACA-TCAA-T--GTA-TAC-AG-AAAT----GCA---TCAA-TT--A-CT-A-ACTGTACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAACAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGTACACA-TATAAAAAT---ATAA-ATTTGAG-ATTTT---CTGTA-AT-TGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ATC-CGAGATATTGGAA--TTTGCGAATGACCTGTA-TCGC-TAATT-AACGCGAAA---ATAAATCTCTTGCAAATAATAA
gi|20 : T-A-ACTGCACAGGTGCAAGTACATG-------TAA-TAT-GAT-GACGA-TG---AAAAAT-GTTGAAATGCG-------TTGA-TT-CTGGTGT-G-CTTTACAAA-TTTAAAGAA---ATAA-ATGTAAG-ATTAT---CCATG-AT-GGATTTA-TTT--TCAAA--AAATAGA-AAT---A---A-ACG-CG
gi|21 : gaaatacacaggtgcaagaattattactacatg-GG-AAATGGTTACA---GCAG-AT--A-C--G-ATTGCA-AGGTACAA-----TG-------TAAGTAT-GATAGGTTA-AGTAAAAAAAT-GTTGAATA-----------TGTGTT-CTGGTGTAA-CAGCAC-----------------TAACATTTGAGAATTAA---CCGTAGAT-GGATTTA-TTTG-GCAGGGCAAG-AGA-AACGCAA---A-ACGTCGAG
gi|22 : AATGCAG--TTAAA-AA-T--AACT-TA-TATTTC-G-C-------------------CAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TG-CATGTGTACAAAATG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTTAA--------------------ATTGA--ATTTccaaatatat
gi|23 : A--AAGTAGA-ATT---A---A-ACG-CGAGATATTTGAA--ATAACGAACAACCCATC-TTGC-GAATT-AATGCGGAA---TCAAATCTCTCACAAA-AATAA
gi|23 : GTTGA-TCACTTA-TTTT--T-G-TG-AGAG-AT-T--TG-A-TTC-CGCATTgtgatcaac
gi|24 : aaagtagaattaaacgcgagatatttgaaataacgaacaacccatcttgcgaattGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTTTCATACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTATCGCGAATAATA
gi|24 : AGA-TCACCTA-TTAT--TCG-CG-A--T-AGAT--TT-A-TTTCCGCGTTggtgatct
gi|25 : gtagaaataaacgcgagatatttgaattttcatacgacccgtctcgcgaattTTCTGTAAA-TCACTTA-TTTT--TCG-CG-AG-T-AC-T--TT-A-TTT-CGCATTT-ATAGGATCCAG-TGTT-TA---TTC-GAG--AA-TTCAATAA-TT
gi|26 : TGTAGA-TCACTTGTTTTT--TCG-CA-AG-T-AT-TTATT-A-TTT-TGCGTTT-GTAGGATGTGGTTGTT-TA---TTC-GCA--AA-t
gi|27 : gtA-ATGCGAG-ATTAT---CCGTG-AT-GGATTTA-TTT--TCAAA--Aattcat
gi|3 : CTGTCGAATCACTTA-TTTT--TCAACG--G-T-AT-TG-TT-A-TTT-----TTCAAT----TACAG-TGT---------------------CAATTA-TTC-GC--GAAAATACAG--TTTAA-AT-T--AACT-TA-TATTTT-G-CGAATTGATC-AGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATATC--AT--------TG-CTTT---------TG-TACG---TCT----T----TG-TATATATATG-TAT---C-----GTT----------------------ATTGA--TTTTA-TCGACTAAAACTAATGAC----AAGTTTCTTACCCAT-GC-ATAA------TACTG-GT----------------------------T---T----TTACGTATCAG-AA---GAAGACGTGTA--CGACCCCCACCG----CTGTTATTTGT-GG-CA-TCATAACGG-C---GT-GAGT-----TT----CATTTG--T----T--TGTTTGCAA-AGCCATTATATGTAGATCTA---TC--TA------A------T----G----ATCAT---AGTAGAA-----AAATATC----TTCAATAACTTTT-G-TAAGC-TT-ACA--TTTT--ATGTTCTTCAA-TAAA-TATAT-A-TTC-T-GTT----ATA--TAGCA---GTATTATTTT--ATTTGCA-TCGT-T--GTA-TGA-GA-GAAT----ACA---TCGA-TT--A-CT-A-ACGGCACAGGTGCA------CA-------TAA-ATT-GTT-GGTGA-TG---AAAAAT-GTTGAACAGTG-------TTGT-TT-CTGGTAT-G-CGGTACACA-TATAGAGAA---G-GG-ATCTGAA-ATAAT---CCGCA-AT-GAATTTA-TTT--GCAAA--AGCCAGA-GAT---G---A-GAG-CGATATATTTGAC--TTCCCGAATGA-CCATC-TCAC-GAATT-AACGCACAA---ATAAATCTCTCCCAAATAA
gi|4 : taaCTTA-TTTT--TCGACATAG-TCAT-T--CT-A-TTTTCGCGTTTA-CAGGGTCAGT-TGTT-TAGTGTTT-GTGTCAA-TACAATAA-TCCTTT--GAATATATAG--TTAAG-AACT--AGCT-TAGTATTTT-GACCAA--------GCTTTTAGCAT-TTA------CACATATATTGCCGT-ACATATCA-AC--------TACCTTG---------TG-TAGA---CCTTCAAT----TGTTAT------G-TACCTAC-----GTT----------------------A-TGA--TTCTACTCGTCGAATCAAAATGAA----CAG-TTAC-A-CCAT-GC-TTGC------TGCTG-ATA---AT-TATTAATT-TGA---TT-ATTT---T----TTAC-TTA-TA-AA--TGAAGACC---A--TGC-CCTCATT-----TTGTCTCTCAT-GG-TAATCTTAACGG-T---GT-GAAT-----TT----A--TTA--T----TTATATTTGCAA-
gi|4 : actacgtgaagctctatATATT----TGCAATAATTTTTTG-TAGGC-TT-ATT--TTT--CAT-TTCTTCA--TAAA-TATTT-TCTTC-G-GTT----ATA----GCA---GTTT-ATTTT----CTACA-TCGA-T--GTT-TGA-G--ACAC----ACA---TCAA-TT--G-GG-A-ACGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAATAGTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGC-CAAA--ATAAAGAA---AGAA-ATTTGAG-ATTAT---CAGTA-AT-GGATTTA-TTT--GCTAA--ATGTAG--AAT---T---A-ACT-CATGATATTTGAA--TTCGCGAACGACCCGTT-TCAG-GAACT-AGCGCGGAA---ATAAtaattttttgtaggcttatttttcatttcttcataaatattttcttcggttatagcagtttattttctacatcgatgtttgagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatagttgaacagcatgttgctggtggacggccaaaataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataatatgatataca
gi|5 : actacgtgaagctctatcttatttttcgacatagtcattctattttcgcgtttacagggtcagttgtttagtgtttgtgtcaatacaataatcctttgaatatatagttaagaactagcttagtattttgaccaagcttttagcatttacacatatattgccgtacatatcaactaccttgtgtagaccttcaattgttatgtacctacgttatgattctactcgtcgaatcaaaatgaacagttacaccatgcttgctgctgataattattaatttgattattttttacttataaatgaagaccatgccctcattttgtctctcatggtaatcttaacggtgtgaatttattatttCTGTGGA-TTACTTA-TTTT--TCG-CA-AG-T-AA-T--TT-A-TTT-CGCGTTTA-CAGGGTCCAG-TGTT-TA---TTT-GCG--AA-TACAATAA-TTT-GC--AATA-TATAG--TTAAA-AC-T--AGCT-TA-TATTTT-G-CAA---------GCTTTA-GCAT-TTACACATATG-AT-------CGT-A-ATATC--AC--------TA-CCTG---------TG-TACG---CCT----TCCATTG-TAT------G-TAC---C-----GTT----------------------ATTGA--TTCTA-TCGATCGAATCAAATGAA----CAGTTTAC-ACCCAT-GC-TTGC------TGCTG-ATAATTAT-T----ATT-TGA---TT-ATTT---T----TTAC-TTATCA-AA--TGAAGACC---A--CG--CCTCATCT----TTGTCTCTCAT-GG-TAATCTTAACGG-T---GT-GAAT-----TT----A--TTA--T----TTATATTTGCAA-taatatgatataca
gi|5 : taATATT----TGCAATAATTTTT-G-TAGGC-CT-ATT--TTT--CATGTTCTTCAA-TAAA-TATTT-C-TTC-G-GTT----ATA----GCA---GTTTTATCTT--ATCTACA-TCGA-T--GTT-TGA-AG-ACAC----ACA---TCAA-TT--G-GG-A-ACGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAAT-GTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGCACAAA-TATAAAGAA---AGAA-ATTTGAG-ATTAT---CAGTA-AT-GGATTTA-TTT--GCTAA--ATGTAGA-AAT---T---A-ACT-CATGATATTTGAA--TTCGCGAACGACCCGTT-TCAG-GAACT-AGCGCGGAA---ATAAtaatttttgtaggcctatttttcatgttcttcaataaatatttcttcggttatagcagttttatcttatctacatcgatgtttgaagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatgttgaacagcatgttgctggtggacggcacaaatataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataaatgatatacagta
gi|6 : tactgtggattacttatttttcgcaagtaatttatttcgcgtttacagggtccagtgtttatttgcgaatacaataatttgcaatatatagttaaaactagcttatattttgcaagctttagcatttacacatatgatcgtaatatcactacctgtgtacgccttccattgtatgtaccgttattgattctatcgatcgaatcaaatgaacagtttacacccatgcttgctgctgataattattatttgattattttttacttatcaaatgaagaccacgcctcatctttgtctctcatggtaatcttaacggtgtgaatttattatttTTCTGTAGA-T-ACTT--TTTT--TCG-CT-AG-T-AT-T--TT-C-TTT-CCCGTT---CACAGGTCGA-TGTT-TC---TTC-GCG--AA-TACTATAA-ATC-GA--GAGAATAGGT--TTAAACAA-TGAGATT-AA-TATTTC-G-CGAATACA-C-CAATACT-GTAC-GTA------TG-AT-------TCTAA-ATATT--ACATTTAGTATA-CGTG---------TG-TAAG---CCT----TCC--TC-TAC------G-T------------TT----------------------TTTGGTTTTTTACTCAACCTATTTAtaaatgatatacagta
gi|6 : gGAAGTTA---G--CA--GCTCGCCG----CT-CGTCTCAG-GGTCTCTTTTAACGGAT---AT-GAGTGGCAATT----AGTT-G--TGGA-T--TGTTTGTAGCAGCGATTA------GCATTA---TC--TA------A------T----ATCCTA-------A--AAAC-----AGAAAT-----TGCCACAATTTAT-A-T---CGTT-A-T--CATT-CAAAGTCTGCA--------ATAT-G-TTT-G-ATT----ATC--TGG---------TATTT----CCCATA----A-C--GTA-CGA-AG-AAACTA--ACA---TATA-TT--A-CT-ATTCTCCATAGGTAC-------TG-------TAACTAA-AAT-GG-AA-TG---CTAAAT--TTGAATAGC----------GT-TT-CTGGTCT-G-AATCACTTA-TAC-GAGAA---ATAA-ATTTGAG-ATTGTTTGCAGTA-AT-GTTTGTA-TTTTGGC-AA--GAGTAAATAAT---A---G-ATA-CGAGATACTTTGA--TTTGCATAGG--CCGTT-TAAA-GAATTAAACAAAGAA---CAAAA--TCTTGCAAATGAAAAtaacgtatacaagaagttagcagctcgccgctcgtctcagggtctcttttaacggatatgagtggcaattagttgtggattgtttgtagcagcgattagcattatctaatatcctaaaaacagaaattgccacaatttatatcgttatcattcaaagtctgcaatatgtttgattatctggtatttcccataacgtacgaagaaactaacatatattactattctccataggtactgtaactaaaatggaatgctaaatttgaatagcgtttctggtctgaatcacttatacgagaaataaatttgagattgtttgcagtaatgtttgtattttggcaagagtaaataatagatacgagatactttgatttgcataggccgtttaaagaattaaacaaagaacaaaatcttgcaaatgaaaaag
gi|7 : gttctgtagatactttttttcgctagtattttctttcccgttcacaggtcgatgtttcttcgcgaatactataaatcgagagaataggtttaaacaatgagattaatatttcgcgaatacaccaatactgtacgtatgattctaaatattacatttagtatacgtgtgtaagccttcctctacgttttttggttttttactcaacctatttataacgtatacaaCTGAAG--TCACTTA-TTTTATTCG-CG-AG-T-AT-T--TTTA-TTTTCACGGTTACCATCGTCCCG-GGTTATA---TTC-ACG--AAAGACAATAAATTC-ATCAAAAAATACAGAATTAAG-AA-T--AACTATA-TATTTCAG-CGAATAGATC-CGCTCCT-GCATGTTA------TG-CA-------CGT-A-ATGTCCAAC--------TA-CATGAGTA-----TG-TACA---TCT----T----TT-TAT------G-TAC---C-----GTT----------------------ATTGA--------------------AAT------------TAT-ACC-AT-GC-TTTC------TAGTGAGTAG--ATCT----ACT-TGA---GTTAGTTGTGT----TTAC-TAACTG-ATATTGAGGACA---AAACGGGCCTAAC-G----CTGTGCCTCGTTGG-CAATTCTAATGA-C---TTTGAGT-----TT----A---TGATT----T--TGCTTGTAA-AGCGATTC------GCTCTA---TT--TA------A------TGTTTA----AT------A--AGAACATCAACATATC----TGCAATAATTTTT-G-TAAGGATT-ATT--TTTTTCAAGTTCTTCAAATAAAGTATAT-G-TTCAG-GTT----ATA--TAGCA---GTTTTATTTC---TTTACA-TCGA-TCTGTA-TGA-GT-GAAT----AAAATGTCAA-TTCTATCT-A-ACTACACAGGTGCA------TG-------TAA-TAT-GAT-GGTGA-TG---ACGAAT-GTTGAATAGCAGGTTTT-TTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTATTTT--GCAAA--ag
gi|8 : aAATACAG--TTAAC-AA-G--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TCG------TG-AT-------CGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TAT------G-TAG---CTTTTAATT----------------------ATTGA--ATTCA-TCGACTTATTCGAATGAC----CAGTTTAT-ACCCATTGTATTGC------TATTG-GTA---TT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAAACA---A--TG--TCTCACCG----CTGTGCCTTGT-GA-TAATTGTAATGG-C---AT-GAGT-----TT----AATTTG--T----A--TGTTTGTAA-AGCGATTA------GCTTTAATGTT--TAT-----A------T----A----------------GAA-----ACGTATCAGTCTGCAATAATTTTT-G-TTAGC-TT-ATT--TTAT-CATGTTCTTCAA-TAAA-TATAT-G-TTT-G-GTTTAATATA--TAGCA---GTTA-ATT----ATATACA-TCGA-T--GCA-TGA-GG-AAAT----ACA---TCAA-TT----CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGTG-------TTTT-TTTCTGGTGT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---ATGTA-AT-GGATTTA-TTT--GGAAA--AAGTAGA-AAT---A---A-ACG-CGATATATTTGAA--TTAGTGAACGACCCGTC-TCGT-GAAT
gi|8 : CTGTAGA-TCACTTA-TTAT--TCA-CG-AG-aataagtgatctacagta
gi|9 : aatacagttaacaagaacttatatttcgcgaatagatccgctcctgcattcgtgatcgtaatgtcactacatgtgtacgtctttgtatgtagcttttaattattgaattcatcgacttattcgaatgaccagtttatacccattgtattgctattggtatttacttgagtagtttttactaactgattgaaaacaatgtctcaccgctgtgccttgtgataattgtaatggcatgagtttaatttgtatgtttgtaaagcgattagctttaatgtttatatagaaacgtatcagtctgcaataatttttgttagcttattttatcatgttcttcaataaatatatgtttggtttaatatatagcagttaattatatacatcgatgcatgaggaaatacatcaattctaactgcacaggtgcatgtaatatgatggcgatgaaaaatgttgaatagtgtttttttctggtgtgcggtacacatataaagaaataaatttgagattatatgtaatggatttatttggaaaaagtagaaataaacgcgatatatttgaattagtgaacgacccgtATACAG--TTAAG-AA-TT-AACT-TG-TATTTC-A-TGAATAGATCTCCCTCTT-GCAT-TTA------TG-AT-------TGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTTCAAATGTCTCATATGTTCAAATGTTGA--ATTTA-TCGACTTATTGAAATGAC----CAGTTTAT-ACCCAT-GT-CTGG------TAGTG-GTA---AT-T----ACT-T-A---TT-GCCT---TGTAATTACGTTACTG-AT--TGACGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCATAATGA-C---TT-GAGT-----TT----AA------T----T--TGTTTGTAA-AGCGATTC------CCTTTA---TT--TAATGTTTA------T----A----A-------G--AGAA-----AC--ATC----TACAATAATTTTT-G-TAAGG-TT-ATT--TTTT-CAAGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----Ata
gi|9 : CACAGGTGCA------TG-------TAA-TAT-GAT-GACGG----------AT-GTTGAATAGCGGGTTTTTTTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAA-ATTAT---CCGTA-AG-GGATTTA-TTTT-GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTAGCGAATGACCCGTC-TCAG-GAATT-AACGCAGAA---ATAAATCTCTCGCGAATAATAAacacaggtgcatgtaatatgatgacggatgttgaatagcgggtttttttttttctggtttgcggtacacatataaagaaataaatttgaaattatccgtaagggatttattttgcaaaaagtagaaataaacgcgagatatttgaattagcgaatgacccgtctcaggaattaacgcagaaataaatctctcgcgaataataagtgacct
blockSeqs : A T AT A T A C A TA T T C TAA CT T A GTG T TC A A T TCA AA C C GA A G A A T A G CACATA C ATATTGC A C CA CATTTAGTA CCT TGTACAAAA C CTT TCAA CCAT T ATATAT C CTA TTTTA CAAATGTCTCATATGTTCAAAT TTT C CATG T T A TAAATG A ATT C ATTA C CAG T GT GTG GTAA G C C AT TGT AA AC ATAT T T TGACATTA T GGCAA TTAAAGT AT GGAT C TATGTAG ATG . ATGGGTTTTTT GT CATCA CA AGTC T C G A . T A G A C A C TAAT AT CTT CCA G T T CT T G A GGTT ATG G CTAT . T AGTACA TACATGT G G A T TAA A CGGGTTTTT G T G A A C T TAA C A TTG G G T TG GC T GCAA T T AA C T G A AAT A
blockSeqs : . . A A . . . . G . . T CAA TG . . . . . . . . C . . . T . . . . . . . . . . . . A C CA AGTA . . A CC . . . . . TAAT A C . . . . . . G . . . . . TT . . G C . . T . GG . . . CGGATA . . AAA . TTA . TAA . . ATGTGTATGA . . CA . . . A . . . . . . . . . . . . A A . . . . . . TA . . A . . A . C . . . . . CAGGTTTT . . G . . C . TAA . . . . G . G G . A . . . T . . . . A
blockSeqs : . . . . . . . . . . . T TAC CG . . . . . . . . C . . . . . . . . . . . . . . . . . C CA . . . . . . . . . . AA A . . . . . . . . . . . . . GT . . . T . . . . C . . . TGGCA . . AAT . TTA . C . . ATGTTTATAA . . CA . . . . . . . . . . . . . . . . A T . . . . . . . . . A . . . . . . . . . . TG . . G . . C . . . . . . . . T . . G . . . T . . . . T
blockSeqs : . . . . . . . . . . . . TA GG . . . . . . . . G . . . . . . . . . . . . . . . . . C CA . . . . . . . . . . . A . . . . . . . . . . . . . GT . . . T . . . . . . . . CGATA . . GAA . T . G . . ATGTTTATAA . . CA . . . . . . . . . . . . . . . . A T . . . . . . . . . A . . . . . . . . . . CG . . G . . C . . . . . . . . . . . A . . . T . . . . C
blockSeqs : . . . . . . . . . . . . TA GG . . . . . . . . C . . . . . . . . . . . . . . . . . C CG . . . . . . . . . . . A . . . . . . . . . . . . . AA . . . C . . . . . . . . TGGCA . . AAT . T . T . . ATGTTTAAT . . AA . . . . . . . . . . . . . . . . C T . . . . . . . . . A . . . . . . . . . . CG . . G . . C . . . . . . . . . . . A . . . A . . . . C
blockSeqs : . . . . . . . . . . . . TA GG . . . . . . . . C . . . . . . . . . . . . . . . . . C CA . . . . . . . . . . . G . . . . . . . . . . . . . GA . . . T . . . . . . . . CGGCG . . AAT . T . T . . ATGATCAT . . GA . . . . . . . . . . . . . . . . A C . . . . . . . . . A . . . . . . . . . . TG . . G . . A . . . . . . . . . . . A . . . T . . . . C
blockSeqs : . . . . . . . . . . . . TA GG . . . . . . . . T . . . . . . . . . . . . . . . . . T CT . . . . . . . . . . . A . . . . . . . . . . . . . TT . . . C . . . . . . . . CGGTG . . CAT . T . G . . ATATCCTA . . CA . . . . . . . . . . . . . . . . A T . . . . . . . . . A . . . . . . . . . . CG . . G . . C . . . . . . . . . . . A . . . C . . . . T
blockSeqs : . . . . . . . . . . . . TG CA . . . . . . . . C . . . . . . . . . . . . . . . . . C CC . . . . . . . . . . . T . . . . . . . . . . . . . TT . . . C . . . . . . . . CGGTG . . AGT . T . G . . ATAA . . CG . . . . . . . . . . . . . . . . A C . . . . . . . . . G . . . . . . . . . . CG . . A . . A . . . . . . . . . . . G . . . C . . . . C
blockSeqs : . . . . . . . . . . . . TA TC . . . . . . . . A . . . . . . . . . . . . . . . . . C CG . . . . . . . . . . . A . . . . . . . . . . . . . GT . . . C . . . . . . . . TGACT . . AAT . T . G . . ATAA . . C . . . . . . . . . . . . . . . . A C . . . . . . . . . G . . . . . . . . . . TG . . G . . A . . . . . . . . . . . T . . . C . . . . .
blockSeqs : . . . . . . . . . . . . TA C . . . . . . . . . . . . . . . . . . . . . . . . C CA . . . . . . . . . . . T . . . . . . . . . . . . . GT . . . . . . . . . . . . TGGCA . . AT . T . G . . TATA . . C . . . . . . . . . . . . . . . . . C . . . . . . . . . A . . . . . . . . . . CA . . G . . T . . . . . . . . . . . T . . . T . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . C CA . . . . . . . . . . . T . . . . . . . . . . . . . CC . . . . . . . . . . . . TGACT . . AA . T . C . . ATA . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . CA . . C . . C . . . . . . . . . . . A . . . A . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . C CA . . . . . . . . . . . T . . . . . . . . . . . . . G . . . . . . . . . . . A . T . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . TG . . T . . C . . . . . . . . . . . A . . . A . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . A . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . C . . G . . C . . . . . . . . . . . A . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . . . . A . . . A . T . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . G . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . .
blockSeqCons : **** CGGCG**** T****** ** ATGTTTATAA********************* CA ** CG******* A******
originalCons : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AG-T-AT-T--TT-A-TTT-CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--NTTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGG-C---GT-GAGT-----TT----AATTTG--T----T--TGTTTGTAA-AGCGATTA------GCTTTA---TT--TA------A------T----A----A-------A--AGAA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGA-T--GTA-TGA-GG-AAAT----ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
finalCons : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AG-T-AT-T--TT-A-TTT-CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--NTTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGGCG----T-GAGT-----TT----AATTTG--TT------TGTTTGTAA-AGCGATTA------GCTTTA---TT--TAATGTTTATAA---------------------A--AGAA-----ACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGA-T--GTA-TGA-GG-AAAT----ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AATA------A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
Alignments
lowQualScore : 222 111111111 111111111 1111 3333333333333333333333 11 111111 11111111111111111111 1111111 111111 1111 111111 222222222
lowQualScore : 2 2 66 5 2 2 2 2 66 2 2 8 000 5 3 3 555 3 44 3 3 4 666 33 2 2 66 2 2 2 2 2 2 2 777777 2 8888888 2 2 55 000000000 444 555555555 2 444 7777 4444 2 777777 2 444 66666 0000000000000000000000 666 5 0 6666 2 2 2 888888 2 777 2 6666 2 555 2 22 555 6666 6 3 3 44 888 44 11 6666 3 3 1 5 111111 2 77777 44444444444444444444 2 5555555 44 000000 3 3 4444 44 77 5555 0 2 2 5 2 33 2 2 2 2 2 2 2 6666 44 555 666 1 3 3 44 3 2 2 0000 555 2 7777 2 2 000000 8888888 5 2 2 2 444 2 000000000 2 2 1 2 2 2 2 888 2 0 2 333 2 4 2 77 0 55 2 9999999 2 2 44 1 3 3 3 555 3
lowQualScore : . . .. . . . . . .. . . . ... . . . ... . .. . . . ... .. . . .. . . . . . . . ...... . ....... . . .. ......... ... ......... . ... .... .... . ...... . ... ..... ...................... ... . . .... . . . ...... . ... . .... . ... . .. ... .... . . . .. ... .. .. .... . . . . ...... . ..... .................... . ....... .. ...... . . .... .. .. .... . . . . . .. . . . . . . . .... .. ... ... . . . .. . . . .... ... . .... . . ...... ....... . . . . ... . ......... . . . . . . . ... . . . ... . . . .. . .. . ....... . . .. . . . . ... .
lowQualScore : 9 7 33 3 7 7 9 9 88 9 9 6 888 2 3 3 888 3 66 3 6 0 222 77 7 7 33 7 7 7 7 5 5 5 222222 5 1111111 5 5 99 444444444 666 333333333 5 444 8888 1111 5 222222 5 444 22222 9999999999999999999999 999 3 8 1111 9 9 9 222222 9 999 9 1111 9 000 9 88 000 1111 7 7 3 66 555 22 55 5555 1 3 0 1 111111 9 11111 22222222222222222222 9 2222222 22 555555 1 1 5555 22 11 7777 5 7 7 3 7 44 5 9 9 9 9 9 9 1111 22 444 555 9 1 1 22 1 9 9 0000 000 9 9999 9 9 333333 7777777 3 7 7 7 777 4 111111111 4 4 2 4 4 7 4 888 4 8 2 999 2 4 2 55 4 66 7 1111111 7 7 22 9 1 1 3 888 2
consensus : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AG-T-AT-T--TT-A-TTT-CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--NTTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGG-C---GT-GAGT-----TT----AATTTG--T----T--TGTTTGTAA-AGCGATTA------GCTTTATT--TAAT--G---T-TTA-TAA-A-AGA--AACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGA-T--GTA-TGA-GG-AAAT----ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
Reference ( family-3358 ) : TTCTGTAGA-TCACTTA-TTTT--TCG-CG-AG-T-AT-T--TT-A-TTT-CGCGTTTAACACGGTCCGG-TGTT-TA---TTC-GCG--AA-TACAATAA-TTC-GC--GAGAATACAG--TTAAA-AA-T--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TA-CGTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--NTTTA-TCGACCTATTCAAATGAC----CAGTTTAT-ACCCAT-GC-TTGC------TACTG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCGTAACGG-C---GT-GAGT-----TT----AATTTG--T----T--TGTTTGTAA-AGCGATTA------GCTTTATT--TAAT--G---T-TTA-TAA-A-AGA--AACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATA--TAGCA---GTTTTATTTT--ATCTACA-TCGA-T--GTA-TGA-GG-AAAT----ACA---TCAA-TT--A-CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGCACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTCGCGAACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTCTCGCGAATAATAA
gi|1 : GTAGT-TCACTTA-ATTT--TCG-CG-AG-T-AT-T--TC-A-TTG-CGCGTT-GGTAGGGTGCGG-TGTT-TA---TTT-GCA--AA-TATCATAA-TTC-GA--AAGGATACAG--TTAAA-AA-T--AACG-TA-TATTTT-G-CGAACACCTC-TGCTC---G----TTC------TG-AT-------TGT-T-ATATC--AT--------TA-CACG---------TG-TTCG---CCT----TCCATTG-TAT------G-TAC---C-----GTT----------------------ATTGA--TTCTC-TCGACCTAGTCAGATGAC----CATTTTAT-ACCCAT-GC-TTGC------TACTC-GTA---CG-T----ACC-TGA---GT-AGGT---T----TT
gi|1 : -C---AT-GAGT-----TT----AATTTG--TGTGCT--TGTTTGTTC-AGCGATTA------ACTTTATTAATAAC--G---T-TTA-TAA-A-AAA--AA---ATC----GACATTAATTTAT-G-CATGC-TT-TTTATTTTT-CATGTTTTTCAA-TGCA-TTTAT-C-TTC-G-ATT----GTT--TTGCA---GTTTTATTTT--ATCTGCA-TCAA-T--GTA-TGA-AG-AAAT----ACA---CTGA-TT--A-CTTA-AATGCACATGCACA------TG-------AAA-TAT-GAT-GGCAT-TA---CAAAAT-GTTGAATAG----------TGT-TT-CTGTTGT-A-CGGCACACA-TATAAAGAA---ATAA-ATCTAAC-ATTAT---CCATA-AT-GAATTTA-TTT--GCAAA--AAGTAGA-AAT---ATAGA-TCG-CGAGATCATTGAA--ATCGCGAACGACCCACC-TCGC-GAATC-AACACGGAA---TTAAATCTATCGCGAATAATAAgtgtattcaatgaattgttacctgtaattgtcgattgtcgttctataatcactttcataatcgtgtggtcttgtcatgagtttaatttgtgtgcttgtttgttcagcgattaactttattaataacgtttataaaaaaaaatcgacattaatttatgcatgctttttatttttcatgtttttcaatgcatttatcttcgattgttttgcagttttattttatctgcatcaatgtatgaagaaatacactgattacttaaatgcacatgcacatgaaatatgatggcattacaaaatgttgaatagtgtttctgttgtacggcacacatataaagaaataaatctaacattatccataatgaatttatttgcaaaaagtagaaatatagatcgcgagatcattgaaatcgcgaacgacccacctcgcgaatcaacacggaattaaatctatcgcgaataataagtgatctacag
gi|10 : gtagttcacttaattttcgcgagtatttcattgcgcgttggtagggtgcggtgtttatttgcaaatatcataattcgaaaggatacagttaaaaataacgtatattttgcgaacacctctgctcgttctgattgttatatcattacacgtgttcgccttccattgtatgtaccgttattgattctctcgacctagtcagatgaccattttatacccatgcttgctactcgtacgtacctgagtaggttttgtgtattcaatgaattgttacctgtaattgtcgattgtcgttctataatcactttcataatcgtgtggtcttgtCTGTAGA-TCACTTA-TTTT--TCG-CG-GG-T-AT-T--TT-ATTTT-CACGTTT-ACACTGTCTGG-TGTT-T-----------------------A-TTC-GC--GAGAACACAG--TTAAG-AA-T--AACT-TA-TATTTT-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AC-------CGT-A-ACGTC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----TTT----------------------ATTGA--AGTTA-TTGACCTATTCAAATGAC----CAATTTAT-CCCCAT-GG-TCGC------TTTAG-GTA---AT-T----ACT-TGA---GT-AGTT---T----TTAC-TAATTG-AT--TGAAGAAA---A--CG--CCTCACCG----CTAAGCCTCGT-GG-CAATCGCAA---------T-GAGT-----TT----AAATAG--T----T--TGTTTGTAA-AGCGATTA------CCTTTA--------------T-TTA-TAA-A---A--AACATATC----TGCAATAATTTTT-G-TAAGC-TT-ATT--TGTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----ATG--TAGTACTTATTTTATGTTCCATGTACA-TCGA-T--GTA-TGA-GA-AAAC----ACA---CCTA-TT--A-CT-A-ACTGCACAGGTGCA------TT-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTCAATAGTG-------TTGT-TT-CTGGTGT-G-CAGTACA------AAAG-------------TGAG-ATTAT---CCG----T-GGATTTA-TTT--TCAAA--Agtgatctacag
gi|11 : aAATACAG--TTAAA-A--T--AACT-TA-TATTTC-G-CTATTAAATC-CGCTCCT-GCAT-TCA------TG-AT-------CGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TGT------G-GAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAATGACCATGCAGTTTAT-ACCCAT-GC-TTGC------TATTG-GTA---AT-T----ACT-CGA---GT-ATTT---T----TTAT-TAACTG-AT--TGAAGACA---G--TG--CCTCACCG----TTGTGCCTCGT-GA-CAATCGTACTGA-CATTAT-GAGT-----TT----AATTTG--T----T--TGTTTATAA-AGCGATTA------GCTTCATT--TAAT--G---T-GTA-TGA-A-AGA--AAC--ATC----TGCAATAAGTTTT-G-TTAGC-TT-ATT--TTGT-CATGTTCTTCGA-TAAA-TATAT-G-CTT-G-GTT----ATA--TAACA---GTTTTATTTA--ATATAAA-TCGA-T--GTA-TGA-GG-GACA----ACA---TCAA-TT----CT-A-ACTGCACAGGTCCA------TG-------TAA-TAT-GAT-TGCGA-TG---AAAAAT-GTTGAATAGCG-------TTAT-TT-CTGGTGT-G-CGGTACACA-TATAAAGAA---ATCA-AT
gi|12 : CTATAGA-TCTCTTA-TTTT---CA-CG-AA-T-AT-T--TT-A-ATT-CGCGTTTA-CATGGTCCGT-TATT-TA---ATC-GCT--AA-TACAATAA-TTT-GC--GGGAATACAG--TTAAA-AA-T--AAC---A-TATTTC-G-CGAATAGATC-CGTTTCT-TCAT-TTA------TG-AT-------TAT-A-ATGTC--AC--------TA-CATC---------TC-TACG---TCT----T----TG-TAT------G-TAC---C-----ATT----------------------ATTGA--ACTTA-TCGATTTATTCAAATGAC----CAGTTGAT-ACCCAT-GC-TTGC------TATTT-GTA---TT-T----AAT-TGA---GT-AG-T---T----TTAT-TAACTA-GT--TGAAT-TAT--A--CG--CCTCACCAATATATATGCCTCGT-GG-CAATCGTGATGG-C---AT-GCGT-----TT-----AT-----T----T--TCTTTGTAA-AGCAATTA------TCTTTATT--TAAT--G---T-TTA-TAA-A-AGA--AACATA------TACAAT-ATTTCT-A-TAA-C-TTAATT--TTTT-CTTATTCTTCAA-TAAA-TATGT-G-TTT-G-TTG----ATA--TAGCA---GTTTTATTTT--ATTCACA-TCGA-T--GCA-TGA-TG-GAGT----ACA---CCAA-TT--att
gi|13 : ttaCTGTAGA-TCACTTA-TTTT--TCA-CG-AG-T-AT-T--TT-A-TTT-CACGTTTA-CGCGGTCTAG-TGTT-TA---TTC-GAG--AA-TACAATAA-TTC-GG--GAGAACACCG--TCGAA-AA-T--AACT-TT-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AC-------CGT-A-ATGCC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAACCGC----CAGTTGAT-ACCCAT-GT-T----------------------T-T----AGT-TGA---GT-AGTT---T----TTAC-TAA-TGCAT--TGAAGAAA---A--CG--CCTCACGG----CTGAGCCTCGT-AG-CAATCGTAA---------T-GAGT-----TT----GAATAG--T----T--TGTTTGTAA-AGCGATTA------TCTTTATT--T-AT--------------A-A-AGA--AACATATC----TGCAATAATTC-----TAAGC----ATT--TTTT-Cct
gi|14 : ataTT--TAATTTG---T-TTG-TAA----------TGTTTC----TGCAATAATTTTT-GCTTAGC-TT-ATT--TTTT-GATGTTCTTAAA-TATA-TATACAG-TTT-G-G-A----ATG--TAGCA---G-TTTATCTT--ATTTACATTCGA-T--GGA-TGAGGG-AAAT----AAA---CCAA--A--A-CT-A-ACTGCACATGTGCA------TG-------TAA-TGTGGAT-GGCGA-TG---AAAAAT-G-TGAATAGCG-------TAGT-TT-CTGGTGT-G-CGTCACA----ATAAAGAA---ATAG-ATGTGAG-ATTGT---CCGTG-AT-GGATTTA-TTT--TC-AA--AAGTAGA-AAT-------A-ACG-CGAGATA-TTGAA--TTCGCGAA-GACTCGTCTTCGCGGAATT-AACGCGGAAAATACAAATCTCT-GCGAATAATAA
gi|15 : gcaatcgtaatgat-CGTTGCT-GTGC-TTA------TA-AT-------TGT-A-AAACC--AC--------TA-CATA---------CG-TGCGCTTTCTA---T----TA-TAA------G-TAC---C-----GTTTAAT------------------ATTGA--GTTTA-TCGACCTACTTGGATGAC----CAGTTTAT-ACCCAT-GC-TTAC------CACTG-GTA---AT-T----ACTCTGACAGGT-AGTT---T----Tgactttagtgatctaca
gi|15 : TAACGA-T---AC-GAGT-----TTTTAAAGTGTG--T----T--TGTTGACAC-AGTAATTATA----ACTTTATT--TAAT--GGGTT-TTT-TAA-A-AAA--A-----TC----TGCAATAATGTAT-G-CATGC-TT-AGT--ATCT-TATacgcattagatgaatttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgcttaacgatacgagtttttaaagtgtgtttgttgacacagtaattataactttatttaatgggttttttaaaaaaatctgcaataatgtatgcatgcttagtatcttatt
gi|16 : cgttgctgtgcttataattgtaaaaccactacatacgtgcgctttctattataagtaccgtttaatattgagtttatcgacctacttggatgaccagtttatacccatgcttaccactggtaattactctgacaggtagttttacgcattagatgaatttacctgtaattgtcgtcatttttaatcattaatgtgaagtgccgctAACACAG--TTAAA-AA-T--AACT-TA-AATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATGTC--A----------A--GTG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTT----------------------ATTGA--ATTTA-TCGACTTATTCAAATTAC----CACTTTAT-ACCCAT-GC-TTGCTAAATGTACAG-GTA---AT-T----TCT-TGG---GT-AAAT---T----TTAC-TAATTG-AA--TGAAGAAA---A--CG--CCTCACCG----CTGAGCCTCGT-t
gi|17 : -GTTTAATAG---------TTGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTAT---CTGTA-ATGGGGTTTA-TTT--
gi|17 : -ATTAT---CTGTA-AT-GGATGTA-TTT--GCAGAG-AAGTA---AAT---A---ATACG-CAAGATATTTGAAAATTTACGATCGACCCGTT-TCAC-GAATT-AACACGGAA---ATTGATATCTAGCGAGTAttttattttttctatattatctgtaatggatgtatttgcagagaagtaaataatacgcaagatatttgaaaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgagtacgtaatctaca
gi|18 : gtttaatagttgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttttattttttctatT-GTTTAATAG----------TGT-TT--TGGT-----CAGCACACA-TGTAAAAAATAAATAA-ATCTGAG-ATTAT---CTGTA-ATGGGGTTTA-TTT--cgtaatctaca
gi|18 : -ATTAT---CTGTA-AT-GGATGTA-TTT--GCAGG--AAGTAGA-AAT---G---A-ACG-CAAGATATTTGAA--TTTACGATCGACCCGTT-TCAC-GAATT-AACACGGAA---ATTGATATCTAGCGAATAttatttttctatattatctgtaatggatgtatttgcaggaagtagaaatgaacgcaagatatttgaatttacgatcgacccgtttcacgaattaacacggaaattgatatctagcgaatacgtaatctacact
gi|19 : tgtttaatagtgttttggtcagcacacatgtaaaaaataaataaatctgagattatctgtaatggggtttatttttatttttctatTT--TTTT-CATGTTCTTCAA-TAAA-TATAT-G-TTC-GCGTT----ATGATTAGCA---GTTTTATTTT--CTTTACA-TCGATT--GAATTGC-GGAAAAT----ACA---CCAAGTT--A-CA-A-ACTGCACAAGTGCA------TGTACATGTTAA-TAT-GAT-GGCGATTG---TAAAAT-ATTGAATAGTG-------TT-T-TT----GTGT-GACGGTACACATTATAAcgtaatctacact
gi|2 : TCCTGTAGA-TCACTTA-TTTTA-TCG-CG-GG-T-AT-A--TA-A-TTT--GCGTCTAACACG-CCTGG-TGCT-TA---TTCTGCG--AA-TACAATAA-TTC-GC--GAGAATATAG--TTAAA-AA-T--AACT-TT-TATTTC-G-CCAATAGATC-AGCTCCT-GCAT-TTA------TG-AT-------CGC-A-ATGTC--AC--------TA-CGTG---------TGCTACG---TCT----T----TG-TAT------GCTAC---------GTT----------------------ATTGA--TTTTA-TCGACCTATTGAAATGAC----CAGTTTAT-ACCCAT-GC-TTCC------TACTG-GTA---AT-T----TCG-TGA---GT-AGAT---T----TTAC-TAATTG-AT--TGAAGACA---A--TG--CCTT-CCG----CTGTGCATCGT-GG-CAATCGCATTGG-C---AT-GCGT-----TT----AATTTG--T----T--TGTTGGTAA-AGCAATTA------GCTTTATT--TAAT-------------AA-A-AGA--AACATATC----TGCAATAATTATT-G-TAAGC-TT-ATT--TTTT-AATGTTCTTCAA-GAAA-TACAT-G-TTC-G-GTT----ATA--CAACA---GTTTTATTTT--ATCTACA-TCAA-T--GTA-TAC-AG-AAAT----GCA---TCAA-TT--A-CT-A-ACTGTACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAACAT-GTTGAATAGCG-------TTGT-TT-CTGGTGT-G-CGGTACACA-TATAAAAAT---ATAA-ATTTGAG-ATTTT---CTGTA-AT-TGATTTA-TTT--GCAAA--AAGTAGA-AAT---A---A-ATC-CGAGATATTGGAA--TTTGCGAATGACCTGTA-TCGC-TAATT-AACGCGAAA---ATAAATCTCTTGCAAATAATAA
gi|20 : T-A-ACTGCACAGGTGCAAGTACATG-------TAA-TAT-GAT-GACGA-TG---AAAAAT-GTTGAAATGCG-------TTGA-TT-CTGGTGT-G-CTTTACAAA-TTTAAAGAA---ATAA-ATGTAAG-ATTAT---CCATG-AT-GGATTTA-TTT--TCAAA--AAATAGA-AAT---A---A-ACG-CG
gi|21 : gaaatacacaggtgcaagaattattactacatg-GG-AAATGGTTACA---GCAG-AT--A-C--G-ATTGCA-AGGTACAA-----TG-------TAAGTAT-GATAGGTTA-AGTAAAAAAAT-GTTGAATA-----------TGTGTT-CTGGTGTAA-CAGCAC-----------------TAACATTTGAGAATTAA---CCGTAGAT-GGATTTA-TTTG-GCAGGGCAAG-AGA-AACGCAA---A-ACGTCGAG
gi|22 : AATGCAG--TTAAA-AA-T--AACT-TA-TATTTC-G-C-------------------CAT-TTA------TG-AT-------CGT-A-ATGTC--AC--------TG-CATGTGTACAAAATG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTTAA--------------------ATTGA--ATTTccaaatatat
gi|23 : A--AAGTAGA-ATT---A---A-ACG-CGAGATATTTGAA--ATAACGAACAACCCATC-TTGC-GAATT-AATGCGGAA---TCAAATCTCTCACAAA-AATAA
gi|23 : GTTGA-TCACTTA-TTTT--T-G-TG-AGAG-AT-T--TG-A-TTC-CGCATTgtgatcaac
gi|24 : aaagtagaattaaacgcgagatatttgaaataacgaacaacccatcttgcgaattGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTTTCATACGACCCGTC-TCGC-GAATT-AACGCGGAA---ATAAATCTATCGCGAATAATA
gi|24 : AGA-TCACCTA-TTAT--TCG-CG-A--T-AGAT--TT-A-TTTCCGCGTTggtgatct
gi|25 : gtagaaataaacgcgagatatttgaattttcatacgacccgtctcgcgaattTTCTGTAAA-TCACTTA-TTTT--TCG-CG-AG-T-AC-T--TT-A-TTT-CGCATTT-ATAGGATCCAG-TGTT-TA---TTC-GAG--AA-TTCAATAA-TT
gi|26 : TGTAGA-TCACTTGTTTTT--TCG-CA-AG-T-AT-TTATT-A-TTT-TGCGTTT-GTAGGATGTGGTTGTT-TA---TTC-GCA--AA-t
gi|27 : gtA-ATGCGAG-ATTAT---CCGTG-AT-GGATTTA-TTT--TCAAA--Aattcat
gi|3 : CTGTCGAATCACTTA-TTTT--TCAACG--G-T-AT-TG-TT-A-TTT-----TTCAAT----TACAG-TGT---------------------CAATTA-TTC-GC--GAAAATACAG--TTTAA-AT-T--AACT-TA-TATTTT-G-CGAATTGATC-AGCTCCT-GCAT-TTA------TG-AT-------CGT-A-ATATC--AT--------TG-CTTT---------TG-TACG---TCT----T----TG-TATATATATG-TAT---C-----GTT----------------------ATTGA--TTTTA-TCGACTAAAACTAATGAC----AAGTTTCTTACCCAT-GC-ATAA------TACTG-GT----------------------------T---T----TTACGTATCAG-AA---GAAGACGTGTA--CGACCCCCACCG----CTGTTATTTGT-GG-CA-TCATAACGG-C---GT-GAGT-----TT----CATTTG--T----T--TGTTTGCAA-AGCCATTATATGTAGATCTATC--TAAT--G---A-TCA-TAG-T-AGA--AAAATATC----TTCAATAACTTTT-G-TAAGC-TT-ACA--TTTT--ATGTTCTTCAA-TAAA-TATAT-A-TTC-T-GTT----ATA--TAGCA---GTATTATTTT--ATTTGCA-TCGT-T--GTA-TGA-GA-GAAT----ACA---TCGA-TT--A-CT-A-ACGGCACAGGTGCA------CA-------TAA-ATT-GTT-GGTGA-TG---AAAAAT-GTTGAACAGTG-------TTGT-TT-CTGGTAT-G-CGGTACACA-TATAGAGAA---G-GG-ATCTGAA-ATAAT---CCGCA-AT-GAATTTA-TTT--GCAAA--AGCCAGA-GAT---G---A-GAG-CGATATATTTGAC--TTCCCGAATGA-CCATC-TCAC-GAATT-AACGCACAA---ATAAATCTCTCCCAAATAA
gi|4 : taaCTTA-TTTT--TCGACATAG-TCAT-T--CT-A-TTTTCGCGTTTA-CAGGGTCAGT-TGTT-TAGTGTTT-GTGTCAA-TACAATAA-TCCTTT--GAATATATAG--TTAAG-AACT--AGCT-TAGTATTTT-GACCAA--------GCTTTTAGCAT-TTA------CACATATATTGCCGT-ACATATCA-AC--------TACCTTG---------TG-TAGA---CCTTCAAT----TGTTAT------G-TACCTAC-----GTT----------------------A-TGA--TTCTACTCGTCGAATCAAAATGAA----CAG-TTAC-A-CCAT-GC-TTGC------TGCTG-ATA---AT-TATTAATT-TGA---TT-ATTT---T----TTAC-TTA-TA-AA--TGAAGACC---A--TGC-CCTCATT-----TTGTCTCTCAT-GG-TAATCTTAACGG-T---GT-GAAT-----TT----A--TTA--T----TTATATTTGCAA-
gi|4 : actacgtgaagctctatATATT----TGCAATAATTTTTTG-TAGGC-TT-ATT--TTT--CAT-TTCTTCA--TAAA-TATTT-TCTTC-G-GTT----ATA----GCA---GTTT-ATTTT----CTACA-TCGA-T--GTT-TGA-G--ACAC----ACA---TCAA-TT--G-GG-A-ACGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAATAGTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGC-CAAA--ATAAAGAA---AGAA-ATTTGAG-ATTAT---CAGTA-AT-GGATTTA-TTT--GCTAA--ATGTAG--AAT---T---A-ACT-CATGATATTTGAA--TTCGCGAACGACCCGTT-TCAG-GAACT-AGCGCGGAA---ATAAtaattttttgtaggcttatttttcatttcttcataaatattttcttcggttatagcagtttattttctacatcgatgtttgagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatagttgaacagcatgttgctggtggacggccaaaataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataatatgatataca
gi|5 : actacgtgaagctctatcttatttttcgacatagtcattctattttcgcgtttacagggtcagttgtttagtgtttgtgtcaatacaataatcctttgaatatatagttaagaactagcttagtattttgaccaagcttttagcatttacacatatattgccgtacatatcaactaccttgtgtagaccttcaattgttatgtacctacgttatgattctactcgtcgaatcaaaatgaacagttacaccatgcttgctgctgataattattaatttgattattttttacttataaatgaagaccatgccctcattttgtctctcatggtaatcttaacggtgtgaatttattatttCTGTGGA-TTACTTA-TTTT--TCG-CA-AG-T-AA-T--TT-A-TTT-CGCGTTTA-CAGGGTCCAG-TGTT-TA---TTT-GCG--AA-TACAATAA-TTT-GC--AATA-TATAG--TTAAA-AC-T--AGCT-TA-TATTTT-G-CAA---------GCTTTA-GCAT-TTACACATATG-AT-------CGT-A-ATATC--AC--------TA-CCTG---------TG-TACG---CCT----TCCATTG-TAT------G-TAC---C-----GTT----------------------ATTGA--TTCTA-TCGATCGAATCAAATGAA----CAGTTTAC-ACCCAT-GC-TTGC------TGCTG-ATAATTAT-T----ATT-TGA---TT-ATTT---T----TTAC-TTATCA-AA--TGAAGACC---A--CG--CCTCATCT----TTGTCTCTCAT-GG-TAATCTTAACGG-T---GT-GAAT-----TT----A--TTA--T----TTATATTTGCAA-taatatgatataca
gi|5 : taATATT----TGCAATAATTTTT-G-TAGGC-CT-ATT--TTT--CATGTTCTTCAA-TAAA-TATTT-C-TTC-G-GTT----ATA----GCA---GTTTTATCTT--ATCTACA-TCGA-T--GTT-TGA-AG-ACAC----ACA---TCAA-TT--G-GG-A-ACGAAACAGGTGCA------TG-------TGA-GTT-GAT-GGCAA-TG---AAAAAT-GTTGAACAGCA-------T-GT-TG-CTGGTGG-A-CGGCACAAA-TATAAAGAA---AGAA-ATTTGAG-ATTAT---CAGTA-AT-GGATTTA-TTT--GCTAA--ATGTAGA-AAT---T---A-ACT-CATGATATTTGAA--TTCGCGAACGACCCGTT-TCAG-GAACT-AGCGCGGAA---ATAAtaatttttgtaggcctatttttcatgttcttcaataaatatttcttcggttatagcagttttatcttatctacatcgatgtttgaagacacacatcaattgggaacgaaacaggtgcatgtgagttgatggcaatgaaaaatgttgaacagcatgttgctggtggacggcacaaatataaagaaagaaatttgagattatcagtaatggatttatttgctaaatgtagaaattaactcatgatatttgaattcgcgaacgacccgtttcaggaactagcgcggaaataataaatgatatacagta
gi|6 : tactgtggattacttatttttcgcaagtaatttatttcgcgtttacagggtccagtgtttatttgcgaatacaataatttgcaatatatagttaaaactagcttatattttgcaagctttagcatttacacatatgatcgtaatatcactacctgtgtacgccttccattgtatgtaccgttattgattctatcgatcgaatcaaatgaacagtttacacccatgcttgctgctgataattattatttgattattttttacttatcaaatgaagaccacgcctcatctttgtctctcatggtaatcttaacggtgtgaatttattatttTTCTGTAGA-T-ACTT--TTTT--TCG-CT-AG-T-AT-T--TT-C-TTT-CCCGTT---CACAGGTCGA-TGTT-TC---TTC-GCG--AA-TACTATAA-ATC-GA--GAGAATAGGT--TTAAACAA-TGAGATT-AA-TATTTC-G-CGAATACA-C-CAATACT-GTAC-GTA------TG-AT-------TCTAA-ATATT--ACATTTAGTATA-CGTG---------TG-TAAG---CCT----TCC--TC-TAC------G-T------------TT----------------------TTTGGTTTTTTACTCAACCTATTTAtaaatgatatacagta
gi|6 : gGAAGTTA---G--CA--GCTCGCCG----CT-CGTCTCAG-GGTCTCTTTTAACGGAT---AT-GAGTGGCAATT----AGTT-G--TGGA-T--TGTTTGTAGCAGCGATTA------GCATTATC--TAAT--A---TCCTA-AAA-ACAGA--AA-----T----TGCCACAATTTAT-A-T---CGTT-A-T--CATT-CAAAGTCTGCA--------ATAT-G-TTT-G-ATT----ATC--TGG---------TATTT----CCCATA----A-C--GTA-CGA-AG-AAACTA--ACA---TATA-TT--A-CT-ATTCTCCATAGGTAC-------TG-------TAACTAA-AAT-GG-AA-TG---CTAAAT--TTGAATAGC----------GT-TT-CTGGTCT-G-AATCACTTA-TAC-GAGAA---ATAA-ATTTGAG-ATTGTTTGCAGTA-AT-GTTTGTA-TTTTGGC-AA--GAGTAAATAAT---A---G-ATA-CGAGATACTTTGA--TTTGCATAGG--CCGTT-TAAA-GAATTAAACAAAGAA---CAAAA--TCTTGCAAATGAAAAtaacgtatacaagaagttagcagctcgccgctcgtctcagggtctcttttaacggatatgagtggcaattagttgtggattgtttgtagcagcgattagcattatctaatatcctaaaaacagaaattgccacaatttatatcgttatcattcaaagtctgcaatatgtttgattatctggtatttcccataacgtacgaagaaactaacatatattactattctccataggtactgtaactaaaatggaatgctaaatttgaatagcgtttctggtctgaatcacttatacgagaaataaatttgagattgtttgcagtaatgtttgtattttggcaagagtaaataatagatacgagatactttgatttgcataggccgtttaaagaattaaacaaagaacaaaatcttgcaaatgaaaaag
gi|7 : gttctgtagatactttttttcgctagtattttctttcccgttcacaggtcgatgtttcttcgcgaatactataaatcgagagaataggtttaaacaatgagattaatatttcgcgaatacaccaatactgtacgtatgattctaaatattacatttagtatacgtgtgtaagccttcctctacgttttttggttttttactcaacctatttataacgtatacaaCTGAAG--TCACTTA-TTTTATTCG-CG-AG-T-AT-T--TTTA-TTTTCACGGTTACCATCGTCCCG-GGTTATA---TTC-ACG--AAAGACAATAAATTC-ATCAAAAAATACAGAATTAAG-AA-T--AACTATA-TATTTCAG-CGAATAGATC-CGCTCCT-GCATGTTA------TG-CA-------CGT-A-ATGTCCAAC--------TA-CATGAGTA-----TG-TACA---TCT----T----TT-TAT------G-TAC---C-----GTT----------------------ATTGA--------------------AAT------------TAT-ACC-AT-GC-TTTC------TAGTGAGTAG--ATCT----ACT-TGA---GTTAGTTGTGT----TTAC-TAACTG-ATATTGAGGACA---AAACGGGCCTAAC-G----CTGTGCCTCGTTGG-CAATTCTAATGA-C---TTTGAGT-----TT----A---TGATT----T--TGCTTGTAA-AGCGATTC------GCTCTATT--TAAT--G---T-TTAATAAGA-ACATCAACATATC----TGCAATAATTTTT-G-TAAGGATT-ATT--TTTTTCAAGTTCTTCAAATAAAGTATAT-G-TTCAG-GTT----ATA--TAGCA---GTTTTATTTC---TTTACA-TCGA-TCTGTA-TGA-GT-GAAT----AAAATGTCAA-TTCTATCT-A-ACTACACAGGTGCA------TG-------TAA-TAT-GAT-GGTGA-TG---ACGAAT-GTTGAATAGCAGGTTTT-TTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---CCGTA-AT-GGATTTATTTT--GCAAA--ag
gi|8 : aAATACAG--TTAAC-AA-G--AACT-TA-TATTTC-G-CGAATAGATC-CGCTCCT-GCAT-TCG------TG-AT-------CGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TAT------G-TAG---CTTTTAATT----------------------ATTGA--ATTCA-TCGACTTATTCGAATGAC----CAGTTTAT-ACCCATTGTATTGC------TATTG-GTA---TT-T----ACT-TGA---GT-AGTT---T----TTAC-TAACTG-AT--TGAAAACA---A--TG--TCTCACCG----CTGTGCCTTGT-GA-TAATTGTAATGG-C---AT-GAGT-----TT----AATTTG--T----A--TGTTTGTAA-AGCGATTA------GCTTTA------AT--G---T-TTA-TAT-A--GA--AACGTATCAGTCTGCAATAATTTTT-G-TTAGC-TT-ATT--TTAT-CATGTTCTTCAA-TAAA-TATAT-G-TTT-G-GTTTAATATA--TAGCA---GTTA-ATT----ATATACA-TCGA-T--GCA-TGA-GG-AAAT----ACA---TCAA-TT----CT-A-ACTGCACAGGTGCA------TG-------TAA-TAT-GAT-GGCGA-TG---AAAAAT-GTTGAATAGTG-------TTTT-TTTCTGGTGT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAG-ATTAT---ATGTA-AT-GGATTTA-TTT--GGAAA--AAGTAGA-AAT---A---A-ACG-CGATATATTTGAA--TTAGTGAACGACCCGTC-TCGT-GAAT
gi|8 : CTGTAGA-TCACTTA-TTAT--TCA-CG-AG-aataagtgatctacagta
gi|9 : aatacagttaacaagaacttatatttcgcgaatagatccgctcctgcattcgtgatcgtaatgtcactacatgtgtacgtctttgtatgtagcttttaattattgaattcatcgacttattcgaatgaccagtttatacccattgtattgctattggtatttacttgagtagtttttactaactgattgaaaacaatgtctcaccgctgtgccttgtgataattgtaatggcatgagtttaatttgtatgtttgtaaagcgattagctttaatgtttatatagaaacgtatcagtctgcaataatttttgttagcttattttatcatgttcttcaataaatatatgtttggtttaatatatagcagttaattatatacatcgatgcatgaggaaatacatcaattctaactgcacaggtgcatgtaatatgatggcgatgaaaaatgttgaatagtgtttttttctggtgtgcggtacacatataaagaaataaatttgagattatatgtaatggatttatttggaaaaagtagaaataaacgcgatatatttgaattagtgaacgacccgtATACAG--TTAAG-AA-TT-AACT-TG-TATTTC-A-TGAATAGATCTCCCTCTT-GCAT-TTA------TG-AT-------TGT-A-ATGTC--AC--------TA-CATG---------TG-TACG---TCT----T----TG-TAT------G-TAC---C-----GTTCAAATGTCTCATATGTTCAAATGTTGA--ATTTA-TCGACTTATTGAAATGAC----CAGTTTAT-ACCCAT-GT-CTGG------TAGTG-GTA---AT-T----ACT-T-A---TT-GCCT---TGTAATTACGTTACTG-AT--TGACGACA---A--CG--CCTCACCG----CTGTGCCTCGT-GG-CAATCATAATGA-C---TT-GAGT-----TT----AA------T----T--TGTTTGTAA-AGCGATTC------CCTTTATT--TAAT--G---T-TTA-TAA-G-AGA--AAC--ATC----TACAATAATTTTT-G-TAAGG-TT-ATT--TTTT-CAAGTTCTTCAA-TAAA-TATAT-G-TTC-G-GTT----Ata
gi|9 : CACAGGTGCA------TG-------TAA-TAT-GAT-GACGG----------AT-GTTGAATAGCGGGTTTTTTTTT-TT-CTGGTTT-G-CGGTACACA-TATAAAGAA---ATAA-ATTTGAA-ATTAT---CCGTA-AG-GGATTTA-TTTT-GCAAA--AAGTAGA-AAT---A---A-ACG-CGAGATATTTGAA--TTAGCGAATGACCCGTC-TCAG-GAATT-AACGCAGAA---ATAAATCTCTCGCGAATAATAAacacaggtgcatgtaatatgatgacggatgttgaatagcgggtttttttttttctggtttgcggtacacatataaagaaataaatttgaaattatccgtaagggatttattttgcaaaaagtagaaataaacgcgagatatttgaattagcgaatgacccgtctcaggaattaacgcagaaataaatctctcgcgaataataagtgacct