lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111
lowQualScore : 11 2 222 11 1 1111 1111 11 33333333333333333333 111 55555555555555555555555555555555555555555 1 1 44444444 2222 111 11111111 222222 1 33333333333333333 111111 11 111 2 1 1 1 1 444444444444 1 2 1 1 333 11 1 1 1 11111 1 22 22 1 6666 2 22 33333333333333333333333333333333333333333333333333333333333333333333333 66666666666 44444444444 4 111 44 2 2 4 11111 2 8888888888888888888888888888888888888888888888 33 1 1 2 333 1 111 1 3 1 22222 22 11 111 333333333333333 1 22 111 11 11 1 1 111111111111 1 2 1111111 333333 111 2 2 22222222222222 11111 111111 1 11111 11111 1 11 33333333333333333 11111111 1 333333333 111111 11111111111111 111111 11111111 1 1111 333333333333333 1111111 22222222222 22222 1111111111 4444444444444444444444444444444444444444444444444444444444444 11111111111 111111 1111 1111111 22222222222 11111 1 11111 2 1 1111 8888888888888888888888888888888888888 1
lowQualScore : 11 88 6 8 8 0 8 000 8 11 3 0 8 0 8 6 3 5 77 7777 5 1 5 0 0000 777 5 00 88888888888888888888 77 222 55555555555555555555555555555555555555555 6 888 6 3 3 3 77777777 99 666 5 5 5 3333 000 5 00000000 5 000000 6 3 11111111111111111 3 999999 55 9999 8 8 8 444 3 0 8 8 8 0 7 0 0 0 333333333333 3 3 7 3 3 555 3 88 0 0 0 88888 0 2 77 2 77 5 2222 0 3 77 8 00000000000000000000000000000000000000000000000000000000000000000000000 99999999999 44444444444 3 0 000 6 77 0 6 0 2 0 88888 3 7 6 2222222222222222222222222222222222222222222222 66 3 3 7 444 8 8 8 88 8 6 3 6 6 99 6 6 555 3 6 7 6 6 99 7 6 6 2 8 6 00000 3 0 33 8 0 33 7 6 99 6 6 6 6 6 6 555 0 0 0 555555555555555 5 5 55 000 0 66 77 55 5 5 0 5 5 5 5 1 5 444444444444 0 0 3333333 3 5 5 666666 5 5 77 000 5 5 5 5 5 66 99999999999999 9 5 22222 444444 3 22222 22222 5 0 66 44 777 4 4 44444444444444444 66666666 3 3 3 55 1 555555555 99999 777 000000 3 66666666666666 3 3 000000 3 22222222 666 8 3 1111 666 88 99999 55 3 3 3 3 4 3 3 222222222222222 3 3 55 9999999 3 33333333333 8 11111 7777777777 4 1111111111111111111111111111111111111111111111111111111111111 9999 99999999999 222222 2 4 4 3333 1 66 4 4 4 8 8888888 99999999999 00000 8 4 777 66 4 5 0 5 77777 5 5 0 55 5 5 2 5 5 9999 2 2222222222222222222222222222222222222 0 5 1 1 5
lowQualScore : .. .. . . . . . ... . .. . . . . . . . . .. .... . . . . .... ... . .. .................... .. ... ......................................... . ... . . . . ........ .. ... . . . .... ... . ........ . ...... . . ................. . ...... .. .... . . . ... . . . . . . . . . . ............ . . . . . ... . .. . . . ..... . . .. . .. . .... . . .. . ....................................................................... ........... ........... . . ... . .. . . . . . ..... . . . .............................................. .. . . . ... . . . .. . . . . . .. . . ... . . . . . .. . . . . . . ..... . . .. . . .. . . .. . . . . . . ... . . . ............... . . .. ... . .. .. .. . . . . . . . . . ............ . . ....... . . . ...... . . .. ... . . . . . .. .............. . . ..... ...... . ..... ..... . . .. .. ... . . ................. ........ . . . .. . ......... ..... ... ...... . .............. . . ...... . ........ ... . . .... ... .. ..... .. . . . . . . . ............... . . .. ....... . ........... . ..... .......... . ............................................................. .... ........... ...... . . . .... . .. . . . . ....... ........... ..... . . ... .. . . . . ..... . . . .. . . . . . .... . ..................................... . . . . .
lowQualScore : 00 88 0 0 0 4 0 000 0 22 6 6 0 8 0 7 3 7 11 0000 7 7 1 2 6666 111 0 11 99999999999999999999 44 111 99999999999999999999999999999999999999999 7 333 7 3 3 2 00000000 22 111 7 7 7 0000 000 7 44444444 7 000000 7 3 00000000000000000 5 222222 88 3333 0 0 0 000 2 0 0 0 0 0 0 0 0 0 333333333333 3 7 3 3 3 333 7 33 0 0 0 55555 0 5 55 5 55 5 5555 0 2 55 8 22222222222222222222222222222222222222222222222222222222222222222222222 00000000000 00000000000 0 0 555 0 55 0 0 0 5 0 77777 7 3 7 3333333333333333333333333333333333333333333333 77 3 3 0 777 0 0 0 88 0 0 5 7 7 22 7 7 333 3 7 7 7 7 22 3 7 7 0 0 0 00000 8 6 22 0 8 77 3 7 88 7 7 7 7 7 7 555 8 8 8 777777777777777 4 7 44 000 7 44 99 77 7 7 1 0 0 4 7 4 0 111111111111 0 0 5555555 6 0 0 000000 7 7 99 000 0 0 0 0 0 99 44444444444444 8 0 55555 444444 8 55555 55555 0 0 11 77 888 4 4 99999999999999999 11111111 6 6 6 00 3 666666666 11111 000 555555 6 99999999999999 6 6 555555 6 00000000 444 2 6 4444 444 66 11111 00 6 6 6 6 4 6 6 222222222222222 6 6 00 1111111 6 33333333333 0 00000 8888888888 0 6666666666666666666666666666666666666666666666666666666666666 4444 88888888888 888888 9 4 4 9999 9 11 0 0 0 0 5555555 00000000000 00000 0 0 000 11 4 0 0 0 55555 0 0 0 55 0 0 0 0 0 4444 5 0000000000000000000000000000000000000 0 7 7 7 7
consensus : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAA-GGAT-ATCCCTGGAAG-TCC-TGAGACTNCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT--TCAGG-ACTTCTTATTCCTGC----A-T-T-TGTCCTTAAAT-ATCCC------AGT-AA-CATTAA-GTGT--GAC--T----T-GT---AGGA-ACT--TGTAG-----------GACTCA-AA-TGTCCT-GC-AA-TTCCCACTACCACTGCAG-ATGGT--TTTT--ACAGGAC-T-TT-C-T-TTTG--TTTTT---CA-GGACT---TAC--T-GA----A-T-GA-AATAA----A-AAG-----T--ATAAGTCCC------TCAAATTTCCT--AA--A-GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATCGC-TTTTC-AGG-ACTTGTTGATA------AAAGT-AT-GTGCAAC-AAAAAGTCT-TGG-ACTTTCTG-TACAGNGT--TAAC-CCAAGG-AAAAA-TGAACTGC--T--CATTT-AGCAGTTGCTAGGCCAAGTTCTTTGGNAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGC----------TTACNACTACATTGTAAACTGCTAAGAAATTTCANTATAAGCAGTTANTTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTTNTTTTTNTTATTTACCAAGNNANTAAATTCNTGAA-TTAANNNACATACTTGCAAAGTTTTAAATTATTTAAATCAACTTGATTTATAATTTTTCAATCAGAAATGCAAATAGNAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TGTATCAAT---------------T----------------CGTGTCATTTT-AGT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTATGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTG-T-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAAGATT-----GGAGAGAGGCATGGTCCGCCTTC-TTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-GT-CGCC-G-TCTT-CGAAG-T-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC---CGGGACGAAGGCCCTCGTCGTCGCGGCTC--CTA-C-ACCGAG-TCCATTTTG-AAATGGAATGTAAAATGTAGAG-TT-GG-AT---C---T----TACTCAATTA-TTTTTGTTTGA-T-----TTATA-ATTT-ATTTAATTC--T--G-TGA-GAT--CG---CATTCATCC-T-CTG-TTGTT--TTA--------------ATGATTTATATAACCACT-CCGATGT-----TA------AAATATTT-----GGACC-----C-C-ACAAA--TGG-TTGCATTT---T-GC-ACCATAGCCA----TA-A-A---T---GTTA--------TAACTTTGT-T-A--TAAATTAATA---------TA-----CCAT---TGT------AT-TAT---T----------TTCA-AT-TT------T-ATT---T-C--TT---TT-C-AGAGTGT----TG---CC--AG-----GCTC--T-TTT-C-TTC-GTGGAAG-T-CA-----------TGT-AG-A-T--TATCC-------AA-A-TCG---GG--TG-TT-----ATCAACTTGNG-A-----A-ATGAAGA------------ACT--------T------GC---A--CAT--AG-T-----T------TTAT----ATC--CTT------ACTT------TCCGGGTCGAG-TGAATCA-A----ATATGA--AGCTGCG-A-C-AAATGTGTT-T------NAACTTT-----------GTG-----ATGC-AC---TAGT--TCTGAA-TTGC-AT-AAA-AAATGGACGGAAC-----TGA-ATG-TGGATTTATTGTGG-ATAAAACTTAA-CG-TTGT----TGTTGGA-----------A----------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
Reference ( gi|2 ) : CCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAA-GGATTATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT--TCAGG-ACTTCTTATTCCTGC----A-T-T-TGTCCTTAAAT-ATCCC------AGT-A--CATTAA-GTGT--GAC--T----T-GT---AGGA-ACT--TGTAG-----------CACTCA-AA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGAATGG---TTTT--ACAGGAC-T-TT-C-T-TT-G--TTTTT---CA-GGACT---TAC--T-GA----A-T-GA-AATAA----A-AAG-----T--ATAAGTTCC------TCAAATTTCCT--AA--A-GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGC-TTTTC-AGG-ACTTGTTGATA------AAAGT-AT-GTGCAACAAAAAAGTCT-TGG-ACTTTC-G-TACAGGGT--TAAC-CCAAGG-AAAAA-TGAACTGC--T--TATTT-AGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATT----GGCAG-TTTTCT--AACAGTTCCAAGC----------TTACAAATATATTGT----------GAA--TTTATT-TAA------AATTCT--GTAA---CTACATGTATAAGATTTTTTTTTTTTTTAAGTTTTG--ATTTACTAAGAAAGTA--TTTATGAAATTAACATACATATTTGCAAGGTT--AAATTATTTAAATCAACTTGATTTATAATTTT-CAACCAGAAATGCAA-TAGCAAATCAAT-CAA--TA-ATCAATAATACCGTTGGACAGA-C-TATATCAAT---------------T----------------CGTGTCATTTT--GT-CGATCGGGTTCAAAAA-GCATCGGTGTGTGT-GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGG-ATTGCGCCTTTGATTGCTG-T-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA-GATT-----GGAGAGAGGCATGGTCCGCCTTT-TTGAGTTCTTCCGAGATTCGTGTAAGCTAATATTTCATTACTTGGA-CTT-GT-CGCC-G-TCTT-CGAAG-T-ATTGAGTCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAGAGACCC---CGGGACGAAGGCCCTCGTCGTCGCGG-TC--CTA-C-ACCGAG-TCCATTTTG-AAATGGAATGTAAAATGTAGAG-TT-GG-AT---C---T----TACTCAATTA-TTTT-GTTTGA-T-----TTATA-ATTT-ATTTAATT---T--G-TGA-GAT--CG---CATT-ATCC-T-CTG-T-GTT--TTA--------------ATGATTTATATAACCACT-CCGATGT-----TA------AAAAATTT-----GGACC-----C-C-ACAAA--TGG-TTGCATTT---T-GC-ACCATAGCCA----TA-A-A---T---GTTA--------TAACTTTGT-T-A--TAAATTAATA-----C---TA-----CCAT---TGT------AT-TAT---T----------TTCA-AT-TT------T-ATT---T-C--TT---TT-C-AGAGTGT----TG---CC--AG-----GCTC--T-TTT-C-TTC-GTGGAAG-T-CA-----------TGTGAG-A-T--TATCC-------AA-A-TCG---GG--TG-TT-----ATCAACTTTGG-A-----A-ATGAAGA------------ACT--------T------GC---A--CAT--A--T-----T------CTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATATGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTG-----ATGC-AC---TAGT--TCTGAA-TTGC-AT-AAA-AAATGGACGGAAC-----TGA-ATG-TGGA-TTATTGTGG-ATAAAA-TTAA-CG-TTGT----TGTTGG------------A----------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
gi|1 : CCTCCA--AAA--TAAAT-CCCA-CTTTCTT-GAACATTTGAA-GGATCATCCCTG-AAG-TC--TGAGACTGTCTTTTCCCG-TCCCACTTCT-CTCT-GTCCTAAATGCAG-TGG-AT-AAAT--TCAGGGACTTCTTATTCCTGC----A-TGT-TGTCCT-AAAT-ATCCC------AGT-AA-CATTA--GTGT--GAC--T----TTGT---AG-A-ACTATTGTAG-----------GACTCA-AAATGTTCTTGC-AAATTCCCACTACCACTGCAGA-TGG---TTTT--ACAGGACAT-TT-C-T-TTTG--TTTTT---CA-GGACT----AC--T-GA----A-TTGATAATAA----A-AAG-----TT-ATAAGTCCC------TCAAATTTCCT--AA--AAGTCTCAC-ACCATAA-TA---TATGCAG-ACCA-ATGCA-GG-ACATTAT-AT-GC-TTTTCCAGG-ACATGTTGATA------AAAGT-ATAGTGCAACAAAA--GTCT-TGG-ACTTTCTG-TACAGGGT--TAAC-CCAAGG-AAAAA-TGAACTGC--T--TATTT-AG----------GC--AGTTCTTGGGCAGTTAA--GAGATTATTT---GGCAG-TTT-CT--AACAGTTC-AAGC----------T-ACAA-TATATTGT----------AAAATTTTATT-TAA------ATTTTT--GTAA---CTACATGTATAAGATTTTTTTTTTTTTTTTTTTTTTTTATTTACTAAGAAAGTAAATTTATGAA-TTAACTAACATACTTGCAAAGTTTTAAATTATTTAAATCAACTTGATTTATAATTTTTCAATCAGAAATGCAAATAGCAAATCAATACAAAATA-ATCA-TAATACCGTTGGACAGAACATATATCAATGTTATTGAAAGATATT----------------CGTGTCATTTTTAGT-CGATCGGGTTCAAAAA-ACATCGG-GTGTGTTATGCGTCAATTCAAATAAAAACGA-CCGATAACTCTGT-G-CAAGCATGACGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTG-T-AAAATGACAGTCTCAGTTGG-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-CGATATACCAGATGTTATACTGAGTAAGATATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGA--ATT-----GTTGGACTGCATGGTC-GCCTCT-T-GAGTTCTTCCGAGATTCGTCGAAGCTAATATT-CATTACTTGGA-CTT-GTTCGCC-G-TCTT-CGAAG-T-ATTAGATCAAGCCTCGACGA-TATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-----GGACGAAGGCC-TCGTCGGCGCGGCTC--CTA-C-ACCGAGGTCCATTTTG-AAATGGAATGTAAAACGTAGAG-TT-GGGAT---C---G----TACTCAATTA-TTTTTGTTT-A-T-----TT-TA-ATTT-ATT-AATTC--T--G-TGA-GAT--CG---CATC-ATCC-T-CTG-TTGTT--TTA--------------ATGATATATATAACCACT-CCGATGT-----TA------AAATATTT-----GGACC-----C-CCACAAA--TG---TGCATTT---T-GC-ACCATAGCCA----TT-A-A---TATTGTTA--------TAACTTTGT-T-A--TAAATGAATA---------TA-----CCAT---TGT------AT-TAT---T----------TTCA-AT-TT------T--TT---C-T--TT---TT-C-AGAGTGT----TG---CC--AG-----GCTC--T-TT--C-TTCTGTGGAAG-T-CA-----------T-T-AG-A-T--TATCC-------AA-AATGG---GA--TG-TTT----ATCAACTTGTG-A-----A-ATGA-GA------------ACT---------------GC---A--C-T--AG-T-----T------TTAT----ATC--CTT------ACTT------TTCGG-TCGAG-TGAATCA-A----ATATGA--AGCTGCG-A-C-AAATGTGTT-T------CAACTTT-----------GTG-----ATGC-AC---TAGT--TCTGAA-TTGC-AT-AAA-AAATGGACGGAAC-----TGA-ATG-TGGATTTATTGTGG-ATAAAC-TTAA-CGTTTGT----TGTTGGA-----------A----------TATTCTTGTATTAATG-AAAAAGTG-AATGATATTAAATACGAGCT
gi|10 : CCTCCACAAAAA-TACTT-CCCAACTTTACTTGACTATCTTTA-GGATT---CCTGGAAGATCCATGAGACTCCTTTTTTCCG-TCCT-----T-CTCT-G--CTAAATGCAG-TGGGAT-AA-T--TCAGG-ACTTCTTATGTCTGC----ATT-T-TGTCCTTAAA--A--CC------AGT-AACCATTAA-GTGT--GACTTT----T-GT---AGGA-ACT--TGAAG------------GCTCA-AT-GGTCCT-GCAAA-TTCCCACTACACCTGCAG--TGGTCATTTT--ACAGGAC-T-TTCC-T-TT-GGTTTTTT---CACGGACT---T-CTAT-GA----ATT-GA-AATAA----AGAAGT----T--ATAAGTCCCGCCCATTCAATTATTCTAAAA--A-GTCCTAC-AC-ATGA-TA---TATTCA-GACAAGATGTACGG-ACATTATGATTGCTTTTTC-AGGAACTTCTTGATA------A---TGAT-GTGCAAC-AAAAAGTCTCTGGAACTTTCTG-TACAGAGTTCTAACTCCAAGGAAAAAA-TGAACTGTTAT--CATTT-AGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGC----------
gi|12 : CCTCCA--AAAA-TAA-T-CCCA-CTTTTCTTGAATATTTGAA-GGAT-ATCCCTGGAA--TCC-TGAGACTGCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGG----AAT--TCAGG-ACTACTTATTCCTGC----A-T-T-AGGAC--AAAT-A---C------ATT-A--C-TCAA-ATGT----C--C----T-G----------------------------------CA-AA-T-TCC---C-AA--------TACCACTGCAG-AT-G---TTTT--ACAGGAC-TCTT-C-T-TT-GT-TTTTT---CA-GGACT---TAC--T-G-----A-T-GA-AATAA----A-AGT-----T--ATAA-TCCC------TCAAATTTCTA--AA--A-GTCTCAA-AC-ATGA-TA---TATTCAAGA-CA-ATGCA-GG-ACATTAT-ATCGC-TTTTC-AGG-ACTTGTTGACACTTGATAAAGC-AT-GTGCAAC---AAAGTCT-TGG-ACTTTC-ATTACAGTGT--
gi|15 : CCTCCA--AAAA-TAAAT-CCCA-TTTTCTT-GAATATTTGAA-GGAT-ATCCCTGGAAG-TCT-TAAGACTTCCTTTTCCAG-TCCCACTTTT-TTCT-TTCGTAA-TGCAG-TGGGAT-AA-T--TCAGG-AATTCTGATTCCTGC----A-T-T-TGTCCTTTAAT-ATCCC------AGTAA--CATTAA-GTGT--CACT-T----T-GTCA-AGGA-ACT--TTTAGGACAAATACATTACTCA-AA-TGTCTT-GC-AATTTCCCACTACCACTGCAG-ATGAT--TTTT--ACActa
gi|23 : CCTCCA--AAAAATAAATACCCG-CTTTCTT-GAATATTTGAAAGGA--ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAGTTCCCACCT
gi|13 : CTTCTTCTCTAGTCCTAA-TGCAGGTGGGATTAAGTA-TCAGG-ACT-CTTAATTCTGCTCAAG-T-TATGTCCTTAAATTATCC-------AGT-AA-CATTAAAGTGT--GAC--T----TTGT---AGGA-ACT--TGTAG-----------GACTCA-AC-TG-CCT-GCAAA-TTCCCACTACCACTGCAG-ATGC---TTTTTAACAGGAC-T-TT-CTT-TT-G--TTTTCTTACA-GGACT---TGC--TCGA----A-T-GACAATAAGAATA-GAG-----TTAGTAAG-TCC------TCATATTTCCT--AACCG-GTCTCACGAC-ATAATTAAATTATTCAGGA-CA-ATGGA-AGCACA
gi|12 : TTT-GTCCTAA-TGCA---GGAAT-AAGTAGTCCTG-AATTCCCA---CTGC----A-T-T-g
gi|15 : cctccaaaaataatcccacttttcttgaatatttgaaggatatccctggaatcctgagactgccttttccagtcccacttctctctgtcctGTAG-TGGGA--AATT--GCAAG-ACATTTGAGTAATGT----A-T-T-TGTCCTAAAAG-TTCCTTGACAAAGTGA--CACTTA-ATGT--TAC--TGGGAT-ATTAAAGGACAAA--TGCAG-----------GAATCAGAA-T-TCCT-G--AA-TTATC----CCACTGCAtacattactcaaatgtcctgcaaattcccaataccactgcagatgttttacaggactcttctttgttttttcaggacttactgatgaaataaaagttataatccctcaaatttctaaaagtctcaaacatgatatattcaagacaatgcaggacattatatcgcttttcaggacttgttgacacttgataaagcatgtgcaacaaagtcttggactttcattacagtgtcta
gi|19 : cctccaaaaataaatcccattttcttgaatatttgaaggatatccctggaagtcttaagacttccttttccagtcccacttttttctttcgtaaTCCTGC----A---T-TGTCC-TGAAT-AT-----------------ATCAT-GTGTGAGAC--T----T-TT---AGAA-ATT--TGcactgcagatgatttttaca
gi|19 : ctttcttttatttttcaggactaagtactgatgaaataaaaaaaaagttacaagtccctT--GCAGGAC-A-TT-A-TATT-G--CTTTT---CA-GGACT---TGT--T-Gcattatattgcttttcaggacttgttggtca
gi|19 : ctttcttttatttttcaggactaagtactgatgaaataaaaaaaaagttacaagtccctcaaatttctaaaagtctcacacatgatatattcaggacaaC-T-TT-C-T-TTTA--TTTTT---CA-GGACTAAGTAC--T-GA------T-GA-AATAA----A-AAAAAAGTT--ACAAGTCCC------TCAAATTTCTA--AA--A-GTCTCAC-AC-ATGA-TA---TATTCAGGA-CA-ATGCA-GG-ACATTAT-ATTGC-TTTTC-AGG-ACTTGTTGGTgtca
gi|24 : -T-TT-C-T-TTTG--TTTTT---CA-GGACT---TAC--T-GATGACA-T-AA-AAAAA----A-AGA-----T--AAAAGTCCC------TCAAATTTCCTA-AA--A-GTCTCAca
gi|3 : -CCAAGG-AAAAA-TGAACTGC--T--TATTTTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATTT---GGCAG-TTTTCT--AACAGTTCAAAGCAGTTGTGGTTTTACTACTAC-TTGTAAACTGCTAAGAA--TTCAGTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTT--A--TTTG--ATTTACC--GTTACT---TTCCTGAA-TTAAAATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGGAAATCAATACAA--TATATCA-TAATACCGTTGTACAGAAC-TGTATCAAT---------------TAGTTTTGAAAGATATTCGTGTCATTTA--AT-CGATCGGGTTCAAAAAAGCATCGG-GTGTGTTATGCGTCAATTTAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGGATGGCGCGCGTTTT-AACA-GATTCAGG-ATTGCGCCTTTGATTGCTG-T-AAAATGACAGTCTCAGT--GGA-CAAAGA-------------TAGCTGCTGTTCTTTAAA-GGATAT-CCAGATGTTCTA-TGAGTAAG-TATTT--TACTGTGTATTTCA---GAC-TGATGATTTTTTAAT-CTCAGCGA-GATTTGTTTGGAC---TGCATGGTC-GCCTTC-TTGAGTTCTTCCGAGATTCGTCGAAGCTAATATTTCATTACTTGGA-CT--GT-CGCC-G-TCTT-CGAAG-T-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAGA--CCC---CGGGACGAAGGCCCTCGTCG-CGCGGCTC--CTA-C-ACCGAG-TCCATTTTG-AAATGGAATGTAAAATGTAGAG-TT-GG-GA---C---T----TACTCAATTATTTTT-GTTTGATT-----TTATA---TT-ATTTAAT
gi|14 : -CCAAGG-AAAAAATGAACTGT--TATCATTT-AGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGC----------atattctgtttcattgttaaaacccgaaatcagacatatcaatcctctgattgtttttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggatttgttgaaaaattaattataccattgtgtattaattatatttcaatttatcctctattcaatcaatttcattcagagggtgatctgtgcccaggctcgttcttacttgtggaagttcatgtaagatggtatccaaataaatggatat
gi|4 : tAA--CA-ACCAATAG---CATTGGACA-A-C--------AT---------------T----------------T-TATCATTTTAAGTACAANNNNNNNNNNNNN-NNNNNNNNNNNNGT-G--CGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTT--GACA-GATTCAGG-ATTGCGCC-TTGATTGCTGTT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA-GATT-----GGAGAGAGGCATGGT-CGCCTTC-TTGAGTTCTTCCGAGATTCGTGTAAGCT-ATATTTCATTACTTGGA-CTT-GT-CGCC-G-TCTT-CGAAGTT-ATTAGATC-AGCCTCGACGAATATTTTTGAGATTA---------------ATGA-TTTTGT-GCAAGACGAG-GACCC---CGGGACGAAGGCCCTCGTCCTCGCGGCTC--CTACC-ACCGAG-TCCATTTTGAAAATGGAATGTAAAATGTAGAGTTT-GG-AT---C---T----TACTCAATTATTTTT-GTTTGA-T-----TTATA-ATTT-ATTTAATTTC-T--G-TGA-GAT--CG---CATTCATCC-T-CTGTT-GTT--TTA--------------ATGATTTATATAACCACT-CCGATGT-----TA------AAATATTT-----GGACC-----C-C-ACAAA--T-G-TTGCATTT---T-GC-ACCATAGCCA----TA-A-AT--T---GTTA--------TAACTTT-T-T-A--TAAATTAATA---------TA-----CCAT---TGT------AT-TAT---T----------TTCA-AT-TT------T-ATT---T-CT-TT---TT-C-AGAGTGT----TG---CC--AG-----GCTC--T-TTT-C-TTC-GTGGAAG-T-CA-----------TGT-AG-A-T--TATCC-------AA-A-TC----GG--TG-TT-----ATCAACTTGTG-A-----A-ATGAAGA------------ACT--------T------GC---A--CAT--AG-T-----T------TTAT----AT---CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATATGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTG-----ATGC-AC---TAGT--TCTGAA-TTGC-AT-TAA-AAAAGGACGGAAC-----TGA-ATG-TGGATTTATTGTGG-ATAAAACTTAA-CG-TTGT----TGTT-G------------A----------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCTagttgtggtttttactactacttgtaaattgctaagaattcattataagcagttaattcttagcagtttcacttattaagctgagtctatcagttattatattttttaaaagcagttcaattcatttagtcctaataaatatctaactttgcaaactggacaagtgca
gi|6 : GCGTCAATTCAAATAAAAAGGAACCGATAACTCTGT-GTCAAGCATGGCGCGCGTTTT-GACAAGATTCAGGGATTGCGCCTTTGAT-GCTG-T-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATT-CAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAAGATT-----GGAGAGAGGCATGGTC-GCCTTC-TTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-GT-CGCC-G-TCTT-CGAAG-T-ATTAGATCAAGCCTCG-CGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC---CGGGACGAAGGCCCTCGTCGTCGCGG-TCTCCTA-C-ACCGCG-TCCATTTTG-AAATGGAATGTAAA-TGTAGAG-TT-GG-AT---C---T----TACTCAATTA-TTTTTGTTTGACT-----TTATA-ATTT-ATTTAATT---TCTG-TGA-GAT--CG---CATTCATCC-T-CTG-TTGTT--TTA--------------ATGATTTATATAACCACT-CCGATGT-----TA------AAATATTT-----GGACC-----C-C-ACAA---TGG-TTGCATTT---T-GC-ACCATAGCCA----TA-A-A---TT--GTTA--------TAACTTT-T-T-A--TAAATTAATA---------TA-----CCAT---TGT------AT--AT---T----------TTCA-AT-TT------T-ATT---T-C--TT---TT-C-AGAGTGT----TG---CC--AG-----GCTC--T-TTT-C-TTC-GTGGAAG-T-CA-----------TGT-AG-A-T--TATCC-------AA-A-TCG---G---TG-TT-----ATCAACTTTGG-A-----A-ATGAAGA------------ACT--------T------GC---A--CAT--A--G-----T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-AT---AT-TGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTG-----ATGC-AC---TAGT--T-TGAA-TTGC-AT-AAA-AAATGGACGGAAC-----TGA-ATG-TGGATTTATTGTGG-ATAAAACTTAA-CG-TTGT----TGTTGG------------A----------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
gi|5 : GCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGTTG-CAAGCATGGCGCGCGTTTTTGACA-GATCAGGG-ATTGCGCCTT-GATTGCTG-TTAAAATGACAGTCTCAGT--G-A-CAA-GAATTA--CTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCATTAGACCTGATGATTTTTTAATTCTCAGCGAAGATT-----GGAGAGAGGCATG--TCGCCTTTCTTGAGTTCTTCCGAGATTCGTG-AAGCTA-TATTTCATTACTTGGAACTTAGT-CGCCAG-TCTTTCGAAG-TTATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC---CGGGACGAAGGCCCTCGTCCTCGCGG-TCTCCTA-CCACCG-G-TC-ATTTGA-AAATGGAATGTAAA-TGTAGAG-TTTGG-AT---C---T----TACTCAATTA-TTTTTGTTTGA-T-----TTATA-ATTTTATTTAATT---TCTG-TGA-GAT--CG---CATTCATCCGT-CTG-TTGTT--TTA--------------ATGATTTATATAACCACT-CCGATGT-----TA------AAATATTT-----GGACC-----C-C-ACAAA--TGGCTTGCATTT---TTGC-ACCATAGCCA----TA-A-A---TT--GTTA--------TAACTTT-T-T-A--TAAATTAATA---------TA-----CCAT---TG-------AT--AT---T----------TTCA-AT-TT------TTATT---T-C--TT---TT-C-AGAGTGT----TG---CC--AG-----GCTC--T-TTT-C-TTC-GTGGA-G-T-CA-----------TGT-AG-A-T--TATCCC------AA-A-TCG---G---TG-TT-----ATCAACTTTGGGA-----A-ATGAAGA------------ACT--------T------GC---A--CAT--AG-T-----T------TTAT----ATC---TT------ACTT------TTTCGGTCGAG-TGAATCA-A----TT-TGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTG-----ATGC-AC---TAGT--TCTGAA-TTGC-ATTAAACAAATGGACGGAAC-----TGA-ATG-TGGA-TTA-TGTGG-ATAAAACTTAA-CG-TTGT----TGTT-G------------A----------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCTt
gi|21 : CCATTGATT-CCG-T-AAATTCACA---CCAGT--G-AACAAAGAATT------TGTG-AACAGCTGTTCTG---------AT-CCAGATGT--TA-TGAGTGCA-CATTTTATACTCAGTATT--AT-AAAC-TGGTt
gi|17 : acaggcaagtttTTCTTCCAATATTCGTCGAGGCTAATATTT--------GAA-CTG-GT-CTCC-GGTTTC-CGGAN-N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGATTTTTGTCGCAGGACG-GAAACCCTCCCATGGCCA--GCCCGCGGCTCC-----TC--TTA-C-AGTAAG-TCCATTTTG-
gi|8 : ggtcgccTTGATATTA---------------ATTATTT--GT-GCAAGACGA---ACCC---CG--ACGAAGGCCCTCGTCGCCGCT--CC--CTA-C-ACCGAA-TCCATTTTG-AAATG-AATGTAA--TG-AGA--TT-GG-AT---C---T----TACTCAAT-A-TTTT--TGTGA-T-----TTTTA-ATTT-ATTTAATC---T--G---A-GAT--CG---C-TC-ATCC-T-CTG-T-TTT--TTA--------------ATGATATATATAACCACT-CCGATG------TA------AAATATTT-----GGACC-----C-C-ACAAA--TG---TGCATTT---G-CC-ACCATA-CCA----TT-A-ATATT---GTTA--------TAAC--TGT-T-A--TAAATTAA-----------TA-----CCAT---TGT------AT-TA----T----------TTCA-A--TT------T-ATT--------CT---TT-C-AAGGTG-----------C--AG-----GCTA--TCTTT-C-T---GTCGA---T-CA-----------T----G-A-A--TATCC-------AA-A-ATGCATGT--TA-TT-----ATCAAC-TTGT-A-----A-ATGAAGA------------AC---------T------GC---A--CATAGA--TA----T------TTAT----ATC--C-T------AC--------TCCGA--CGA---GATTCA-A----ATA-AA--AGCTGC--A-C-AAATG-GTT-T------CAACTTT------------TG-----A-GC-AC---TAG---TCTGAATTTGC-AT-AAA-AAATGGACGGAACT----TGA-ATGTTGTA-TTGATGTGA-A-AAAC-TTAA-CG-TT-T----TGTTGAATATACTGTATTA----------T-------------TG-AATCAGTG-AAT--TATAATATAC-AGCT
gi|9 : cCGAG-TCCACTTTG-AAATAGA-TGTAAA-TGTAGAG-TTTGG-ATAAGT---TGTAATACTCAATCA-TTTTTGTTCGA-T-----TTTTTTATTT-TTTTAATTC--T--G-TGA-AAT--CG---CATTCATCA-T-CCG-TTGTT--TTA--------------ATGAT----ATAACCCCT-CCAGTGT-----TA------CAATATTT-----GGACC-----C-CCACAAA--TGA-T-GCATTT---T-GC-AACATGGCTA----TGTG-A---G---GGCC--------TAGCTTTGT-T-A--TAAAT----A-----T---T------CCAT---TGT------TT-TATAATT----------TTCA-AT-TT------T-ATT---T-C--TT---TTTC-AGAGTGT----TG---CC--AG-----GCTC--T-TTT-CCTTT-GTGAAAG-T-CA-----------TGC-AT-A-T--TATCC-------AA-AATGA---GG--TGCTT-----ATCAACTTGTG-A-----A-ATGAAGG------------ACT--------A------GC---A--CAT--AG-T-----T------TTAT----ACC--CTCTG----ACTT------TCCGGGTCGAG-TGAATCT-A----ATATGA--GGCTGCG-A-C-AAATGTGTT-T------CCACTTT-----------GTGAACGCAGGC-AC---TAGT--TCTGAA-TTTT-AT-AAT-AAATGGACAGAAC-----TGA-ATG-TGGATTTATTGTGG-ATGAAA-CCGATTG-TTGTAAA-TGTCGGAATATATT----A----------T-------------TG-AACAAGTG-AATGCTAT-ATATAC-AGCTt
gi|7 : cttaaG-AT---CCTAT----TACTCA-TTA-ATTT-ATT-GA-TCATTTTTATA-AT---GATTAATTCCAT--GATGAAGATGTCGGGCCATTCATCC-TACCG-T-GTTGTTTATATAGTATTCTCACGTAATTCATAGAGCAATTTCCGATGTGTAGCTATTGCACAAGAATCTTTTACGGACCACGCCC-T-ACAAAAATAG-TTGCATTTTTAT-GCAAACATAGCCAAGATTA-ATA---T---GTTGTATTTTATTAACTTTGT-T-AATTAGAT--ATA-----TAAATA-----CCAT---TGA------ATATAT---TGTAACTTAGATTCATATGTT------T-ATT---TGC--TT---TTACAAGAGTGT----TG---CCG-AGGGCGTGCAT--T-TTT-G-TCA-GTGGAAG-TGCA-----------TGTATG-ATT--TATCTGAAAATAAG-A-TTGT--GGCATG-TTTTA--ATCAACTTGCT-A-----ATATGAAG-------------ACC--------G------GCAAAA--CAT--AAGT-----TGTGAGGCTATTTTAATC--CATGAGTAAACTTGATAAATTCGGGTCGAG-CTGATCA-ATCTTAAAAGAAGAGCTGGGAA-CAAAAAGTGTTGTATACAGAAGCTTTGATGG------GTG-----ATGCTACACTTAGTTATCTGAA-CTGt
gi|22 : TC-ATTC-T-CTG-TTGTT--TTA--------------ATGAT----ATAACCCCA-TCGATGT-----TA------AAATATTT-----GGACT-----CTC-ACAAA--TG--TTGCATTT---T-GC-ACCATAGCCA----T
gi|3 : t--TGA-TTG--TTT---T-TC-ACCATAGC--------------------TTA--------TAA---TGTAT-A--TAAATAAACA-----C---TA-----TC
gi|18 : ccaaggaaaaatgaactgcttattttagcagttgctaggcagttctttggcagttaagagattatttggcagttttctaacagttcaaagcagttgtggttttactactacttgtaaactgctaagaattcagtataagcagttaattcttagcagtttctacatgtataagatttttttttttttatttgatttaccgttactttcctgaattaaaatacatatttgcaaagtttaaattatttaaatcaacttgatttataattttcaatcagaaatgcaataggaaatcaatacaatatatcataataccgttgtacagaactgtatcaattagttttgaaagatattcgtgtcatttaatcgatcgggttcaaaaaagcatcgggtgtgttatgcgtcaatttaaataaaaaggaccgataactctgtgcaaggatggcgcgcgttttaacagattcaggattgcgcctttgattgctgtaaaatgacagtctcagtggacaaagatagctgctgttctttaaaggatatccagatgttctatgagtaagtattttactgtgtatttcagactgatgattttttaatctcagcgagatttgtttggactgcatggtcgccttcttgagttcttccgagattcgtcgaagctaatatttcattacttggactgtcgccgtcttcgaagtattagatcaagcctcgacgaatatttttgagattaatgatttttgtgcaagacgagaccccgggacgaaggccctcgtcgcgcggctcctacaccgagtccattttgaaatggaatgtaaaatgtagagttgggacttactcaattatttttgtttgattttatattatttaatatattctgtttcattgttaaaacccgaaatcagacatatcaatcctc--------TAGCTTTGT-T-T--TATATAAATA---------TA-----CCAT---TGT------AT-TA----T----------TTCA-AT-TT------T-ATT---T-C--TT---TTCC-AGAGTGT----TG---CC--AG-----GCTC--T-TTT-C-TTC-ATGGAAG-T-CA-----------TGC-AC-A-T--TATCCA------AA-A-TGA---GG--TGTTT-----ATCAACTTGTG-A-----A-ATGAAGG------------ACT--------A------GC---A--CAT--A--ctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggatttgttgaaaaattaattataccattgtgtattaattatatttcaatttatcctctattcaatcaatttcattcagagggtgatctgtgcccaggctcgttcttacttgtggaagttcatgtaagatggtatccaaataaatggatat
gi|3 : gtaatatggtgtgagggtcTTTGT-TGA--AAAATTAATT-----A---TA-----CCAT---TGTGTATTAAT-TATA--T----------TTCA-AT-TTATCCTCT-ATTCAAT-CAATTTCATT-C-AGAGGGTGATCTGTGCCC--AG-----GCTCGTT-CTT-A-CTT-GTGGAAGTT-CA-----------TGTAAG-A-TGGTATCC-------AA-A-Tcatgtagttttat
gi|11 : ccaaggaaaaatgaactgcttattttagcagttgctaggcagttctttggcagttaagagattatttggcagttttctaacagttcaaagcagttgtggttttactactacttgtaaactgctaagaattcagtataagcagttaattcttagcagtttctacatgtataagatttttttttttttatttgatttaccgttactttcctgaattaaaatacatatttgcaaagtttaaattatttaaatcaacttgatttataattttcaatcagaaatgcaataggaaatcaatacaatatatcataataccgttgtacagaactgtatcaattagttttgaaagatattcgtgtcatttaatcgatcgggttcaaaaaagcatcgggtgtgttatgcgtcaatttaaataaaaaggaccgataactctgtgcaaggatggcgcgcgttttaacagattcaggattgcgcctttgattgctgtaaaatgacagtctcagtggacaaagatagctgctgttctttaaaggatatccagatgttctatgagtaagtattttactgtgtatttcagactgatgattttttaatctcagcgagatttgtttggactgcatggtcgccttcttgagttcttccgagattcgtcgaagctaatatttcattacttggactgtcgccgtcttcgaagtattagatcaagcctcgacgaatatttttgagattaatgatttttgtgcaagacgagaccccgggacgaaggccctcgtcgcgcggctcctacaccgagtccattttgaaatggaatgtaaaatgtagagttgggacttactcaattatttttgtttgattttatattatttaatatattctgtttcattgttaaaacccgaaatcagacatatcaatcctctgattgtttttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggaTTTGT-T-T--TAAAT-AATATATCAC---TATATATCCATAATTGT------AT-TAT---T----------T----AT-TT------T-CTT---T-T--TA---CCAC-AGAATGTG---TG---CCTAAG-----GCTC--T-TTTTC-TTC-ATGGA-G-T-CAG----------CATGATTA-T--TATTC-------AATG-TAA---AG--TG-TTTATCTACCGACTTGTG-ATTTTCA-ATGAAGGG-----------ACT--------CTAGCAAGC---AGACAA--A--TAGTCAT------TTAT----ATCTCCTG------ACTT------TCCGGGTCGCGATGAATCCTA----ATATGA--AGCTGCG-A-C---ATGTGTT-TC-----AAACTTTTAAATAGAATCGT------AGGC-AC---TAGT--TGTGAA-TTGC-ATAAAA-AAATGG-CGGAACTGTATTGA-ATG-GTGA-TT-TT-----ATAAAC-TGCT-TG-TTGTGTAATATTGG------------AACTATTGTATT-------------TG-AACCAGTGTAACAATATAA---AC-AGCTaaatggatat
gi|16 : tgtttctaaatt------AT-TAT---T----------TTCA-AT-TT--------ATT---C-C--TT---TTTC-AGAGCGT----TC---TT--GG-----GCTG--T-T---C-TTC-ATAAAAG-T-CAGATACTATCGATGTGAA------TACCC-------AA-AAGCA---GG--TG-TT-----A--AA--TTG--------A-ATGAAGAATAAAGAATCACACTCTATCAAAT------GC---ATGCCC--G--T-----T------CCAT----GCC--CAC------CCTT------TCCATAT-GAG-TGTA-----------ATGA--GACCGCA-A-C-AAATGTGTT-T------CAACTTT-----------GTA-----A-GC-AC---t
gi|20 : ttattttcCTGCA-AAC-AAACATGTTCT------CAACTTT-----------GAG-----AGAG-AC-----AC--TCTAAA-TTGCGAT-GAA-A--TGGATGGAAC-----TGACAAC-TGAA-GT-TTATGGCATGAAA-CT----G-TGAT----TGTTGG------------A----------C-------------TA-AATA
Alignments
lowQualScore : 11111111111111111111111111111111
lowQualScore : 1 1 1 1 1111 22 333333333333 2 11 11 111 111 11111111111 1 1111 22222222 111111 11111 111 1 222222 1 1 11 1 1 11 1 22 22 22 1 3333 1 11 77777777777 1 777777777777 1 222222 11 222 111 3333 222 1 22 2 2 11 1 11 111 11111111111111111111111111111111 2222 1 1 1 11 1 1 1 222 11111 11 333333333333333 1 1 1 11111111 11 2222222222222222 111111 1111111 222222222222 11111 111 333 11111111 1111 22222222222222 11111111111111 11111111 1 1111 11111 1 3333333333333 1111111 3333333333333333333333333333333333333 111111 111111 1111111 1111111 22222222222 111111 111 1111 8888888888888888888888888888888888888
lowQualScore : 99 6 3 6 6 5 3 6 77 1 6 6 6 3 6 6 2 6 6 3 4444 6 888 3 6 7 6 6 2 6 22 99 2 99 444444444444 6 6 6 0 6 9999 44 5 33 000 5 000 0 44444444444 1 2222 5 44444444 666666 5 44444 6 6 6 111 6 5 6 6 6 8 9 8 8 8 888888 3 0 0 3 33 0 0 9 1 88 8 6 22 8 55 1 55 0 2222 0 11 5 33333333333 3 1 8 5 555555555555 1 5 999999 1 22 111 3 3 666 5555 88 22 1 999 11 3 333 0 22 3 3 1 7 33 0 33 2 3 777 99999999999999999999999999999999 2 6666 0 0 0 22 6 6 6 6 6 5 5 1 77 5 5 999 1 5 3 5 5 77 5 5 5 7 6 444 66666 55 66 6 77 5 5 77 5 5 5 5 5 5 111111111111111 3 6 5 66 5 77 0 888 5 5 4 4 2 5 5 777 00000000 1 4 9999 1 8 2 4 4 9999 4 00 9999999999999999 9999 66 66 777 4 4 4 55 4 4 111111 4444444 7 4 222222222222 4 777 4 4 11111 4 66 000 4 777 4 9999 5 5 222 66666666 3 3 55 0000 3 3 11111111111111 999999 3 44444444444444 3 555 999999 22222222 3 555 0 3 0000 555 77 88888 77 3 3 3 3 3 88888 888 555 22222 3 3 0 3 0000000000000 55 1111111 666 3 666 1 99999 3 3 6666 666 55 2222222222222222222222222222222222222 7777 55 1 777777 111111 4 4444444 4 55 3 3 3 7 5555555 66666666666 555555 3 666 55 4 4 4 4 4 4 4 333 4 4 4 66 4 7777 2222222222222222222222222222222222222 8 5 0 0 5
lowQualScore : .. . . . . . . . .. . . . . . . . . . . . .... . ... . . . . . . . .. .. . .. ............ . . . . . .... .. . .. ... . ... . ........... . .... . ........ ...... . ..... . . . ... . . . . . . . . . . ...... . . . . .. . . . . .. . . .. . .. . .. . .... . .. . ........... . . . . ............ . . ...... . .. ... . . ... .... .. .. . ... .. . ... . .. . . . . .. . .. . . ... ................................ . .... . . . .. . . . . . . . . .. . . ... . . . . . .. . . . . . ... ..... .. .. . .. . . .. . . . . . . ............... . . . .. . .. . ... . . . . . . . ... ........ . . .... . . . . . .... . .. ................ .... .. .. ... . . . .. . . ...... ....... . . ............ . ... . . ..... . .. ... . ... . .... . . ... ........ . . .. .... . . .............. ...... . .............. . ... ...... ........ . ... . . .... ... .. ..... .. . . . . . ..... ... ... ..... . . . . ............. .. ....... ... . ... . ..... . . .... ... .. ..................................... .... .. . ...... ...... . ....... . .. . . . . ....... ........... ...... . ... .. . . . . . . . ... . . . .. . .... ..................................... . . . . .
lowQualScore : 22 7 5 7 7 5 3 7 77 0 7 7 7 3 7 7 0 7 7 5 2222 7 777 2 7 3 7 7 5 7 55 22 5 22 888888888888 7 7 7 0 7 3333 00 7 66 000 7 000 1 11111111111 4 1111 7 66666666 444444 7 66666 7 7 7 777 7 0 7 7 7 0 6 0 0 0 888888 2 0 0 2 22 0 0 8 0 33 0 0 00 0 44 0 88 6 2222 6 22 0 00000000000 2 0 8 5 000000000000 0 5 000000 0 55 555 2 2 000 3333 00 00 0 777 77 3 000 7 77 7 7 0 3 88 0 22 5 2 555 88888888888888888888888888888888 5 5555 0 0 0 55 7 7 7 7 7 0 0 4 99 7 7 111 4 7 0 7 7 99 0 7 7 3 7 777 77777 77 00 7 33 0 7 11 7 7 7 7 7 7 222222222222222 2 2 0 44 0 55 0 888 0 0 4 4 4 0 0 888 99999999 0 4 4444 1 9 2 4 4 4444 4 00 4444444444444444 4444 11 11 888 0 0 0 55 0 0 555555 4444444 7 4 888888888888 4 888 4 4 11111 4 11 222 4 888 4 4444 0 0 555 11111111 6 6 00 8888 6 6 44444444444444 666666 3 88888888888888 3 888 666666 77777777 3 888 0 3 4444 888 99 33333 99 3 3 3 3 3 33333 333 888 99999 3 3 0 3 8888888888888 00 0000000 444 6 444 0 11111 6 6 9999 444 00 1111111111111111111111111111111111111 7777 55 1 000000 555555 0 1111111 0 55 6 6 6 3 1111111 44444444444 555555 6 444 55 0 4 4 4 4 4 4 333 4 4 4 11 4 2222 7777777777777777777777777777777777777 9 0 4 4 0
consensus : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGAC-TTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AAG-----TT-ATAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCTATTATTT-AGCAGTTGCTAGGCCAAGTTCTTTGGCAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGGTT-TTACNACTACATTGTAAACTGCTAAGAA--TTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTT-ATTTTT---ATTTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAG-T-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TA-C-ACCGA-GTCCATTTTG-AAATGGAATGTAAAATGTAGAG-TT-GGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----A-TT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TA-A-AT--TGTTATA--------ACTTTGTT-A--TAAAT---TAAT-A-TACCA--------------TTGT------AT-TAT---T----------TTCA-A-T-TT------TATT---T-C--T-T---TT-CA-GAGTGT----TG---CC--AGG-----CTC--T-TTTC-TTC-GTGGAAG-T-CA-----TGT-A-G---AT-----T-AT-CC-AA-A-------TCG---GG--TG-T-----T---ATCAAC-T---TGTGA-----A-ATGAA-GAACTC--GC---A--C--------A------T-A-------G-T--T------TTAT----A--TCCTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGA-----------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
Reference ( family-3080 ) : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTNCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGAC-TT--GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AAG-----T--ATAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATCGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGNGTT--AAC-CCAAGGAAAAA-TGAACTGCT--CATTT-AGCAGTTGCTAGGCCAAGTTCTTTGGNAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGC-----------TTACNACTACATTGTAAACTGCTAAGAAATTTCANTATAAGCAGTTANTTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTTNTTTTTNTTATTTACCAAGNNANTAAATTCNTGAA-TTAANNNACATACTTGCAAAGTTTTAAATTATTTAAATCAACTTGATTTATAATTTTTCAATCAGAAATGCAAATAGNAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TGTATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTATGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAG-T-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TA-C-ACCGA-GTCCATTTTG-AAATGGAATGTAAAATGTAGAG-TT-GGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----A-TT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TA-A-A---TGTTATA--------ACTTTGTT-A--TAAAT---TAAT-A-TACCA--------------TTGT------AT-TAT---T----------TTCA-A-T-TT------TATT---T-C--T-T---TT-CA-GAGTGT----TG---CC--AGG-----CTC--T-TTTC-TTC-GTGGAAG-T-CA-----TGT-A-G---AT-----T-AT-CC-AA-A-------TCG---GG--TG-T-----T---ATCAAC-T---TGNGA-----A-ATGAA-GAACTT--GC---A--C--------A------T-A-------G-T--T------TTAT----A--TCCTT------ACTT------TCCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------NAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGA-----------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
gi|1 : CCTCCA--AAA--TAAAT-CCCA-CTTTCTT-GAACATTTGAAGGATCATCCCTG-AAG-TC--TGAGACTGTCTTTTCCCG-TCCCACTTCT-CTCT-GTCCTAAATGCAG-TGG-AT-AAAT-TCAGGGACTTCTTATTCCTGC----ATGT-T-GTCCT-AAAT-ATCCCAGTAAC-ATTA--GTGTGAC-TTT-GT--AG-AACTATTGTAGG-----------ACTCAAAATGTTCTTGC-AAATTCCCACTACCACTGCAGA-TGGT--TTT--ACAGGACATTTCTTTTG--TTTTT---CA-GGACT----ACT--GA----ATTGATAATAA----A-AAG-----TT-ATAAGTCCC------TCAAATTTCCT-AA--AA-GTCTCAC-ACCATAA-TA---TATGCAG-ACCA-ATGCA-GG-ACATTAT-AT-GCTTTT-CCAGGA-CATGTTGATA------AAAGT-ATAGTGCAACAAAA--GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT--TATTT-AG----------GC--AGTTCTTGGGCAGTTAA--GAGATTATTT---GGCAGTTTCT----AACAGTTC-AAGC-----------T-ACAA-TATATTGTAAA----------ATTTTATT-TAA-------ATTTTT-GTAA---CTACATGTATAAGATTTTTTTTTTTTTTTTTTTTTTTTATTTACTAAGAAAGTAAATTTATGAA-TTAACTAACATACTTGCAAAGTTTTAAATTATTTAAATCAACTTGATTTATAATTTTTCAATCAGAAATGCAAATAGCAAATCAATACAAAATA-ATCA-TAATACCGTTGGACAGAACATATATCAATGTTATTGAAAGATATT----------------CGTGTCATTTTTA-GT-CGATCGGGTTCAAAAA-ACATCGG-GTGTGTTATGCGTCAATTCAAATAAAAACGA-CCGATAACTCTGT-G-CAAGCATGACGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGTTGG-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-CGATATACCAGATGTTATACTGAGTAAGATATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAATTG-TT-----GGA---CTGCATGGT-CGCC-T-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATA-TTCATTACTTGGA-CTT-GTTCGCC-G-TCTT-CGAAG-T-ATTAGATCAAGCCTCGACG-ATATTTTTGAGATTA---------------ATGA-TTTTGT-GCAAGACGAG-GACCC---GGACGAAGG-CCTCGTCGGCGCGG-CTCC---TA-C-ACCGAGGTCCATTTTG-AAATGGAATGTAAAACGTAGAG-TTGGGAT---C---G----TACTCAATTATTT-TTG----TTT-A-TTT-TA-ATTT-A-TTA----A-TT-CTGT----------------GA----GAT--C--G---CA--TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATATATATAACCACT-CCGATGT------------TAA-AATATTT---GGACC-C-----CC-ACAAA--TG---TGCA-TTTT---GCAC-CATAGCCA----TT-A-ATATTGTTATA--------ACTTTGTT-A--TAAAT---GAAT-A-TACCA--------------TTGT------AT-TAT---T----------TTCA-A-T-TT------T-TT---C-T--T-T---TT-CA-GAGTGT----TG---CC--AGG-----CTC----TTTC-TTCTGTGGAAG-T-CA-----T-T-A-G---AT-----T-AT-CCAAA-A-------TGG---GA--TGTT-----T---ATCAAC-T---TGTGA-----A-ATG-A-GAAC-T--GC---A--C---------------T-A-------G-T--T------TTAT----A--TCCTT------ACTT------TTC-GGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------CAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-AT-AA--ACTTAACGTTTGT----TGTTGGA-----------A---------TATTCTTGTATTAATG-AAAAAGTG-AATGATATTAAATACGAGCT
gi|10 : CCTCCACAAAAA-TACTT-CCCAACTTTACTTGACTATCTTTAGGAT---TCCTGGAAGATCCATGAGACTCCTTTTTTCCG-TCCT-----T-CTCT-G--CTAAATGCAG-TGGGAT-AA-T-TCAGG-ACTTCTTATGTCTGC----AT-T-TTGTCCTTAAA--A--CCAGTAACCATTAA-GTGTGAC-TTTTGT--AGGAACT--TGAAGG------------CTCAAT-GGTCCT-GC-AAATTCCCACTACACCTGCAG--TGGTCATTTT-ACAGGAC-TTTCCTTTGGTTTTTT---CACGGACT---T-CTATGA----ATTGA-AATAA----AGAAG-----TT-ATAAGTCCCGCCCATTCAATTATTCT-AA--AAAGTCCTAC-AC-ATGA-TA---TATTCAG-ACAAGATGTACGG-ACATTATGATTGCTTTTTC-AGGAACTTCTTGATA------A---TGAT-GTGCAACAAAAA-GTCTCTGGAACTTTCTGTACAGAGTTCTAACTCCAAGGAAAAAATGAACTGTTATCATTT-AGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGC-----------
gi|11 : TTTGTT-T--TAAAT----AAT-A-TATCACTATATATCCATAATTGT------AT-TAT---T----------T----A-T-TT------TCTT---T-T--TAC---CA-CA-GAATGTG---TG---CCTAAGG-----CTCT-T-TTTC-TTC-ATGG-AG-T-CA------GC-ATGATTAT-----T-AT-TC-AATG-------TAA---AG--TG-TTTATCT---ACCGAC-T---TGTGATTTTCA-ATGAAGGGACTCTAGC---AAGCAGACAA--A------T-A-------G-TCAT------TTAT----ATCTCCTG------ACTT------TCCGGGTCGCGATGAATCCTA----ATA-TGA--AGCTGCG-A-C---ATGTGTT-TC-----AAACTTTTAAATAGAATCGT-A-----GGC-AC---TAGT--TGTGAA-TTGC-A-TAAAA-AAATGG-CGGAAC-TGT-AT-TGAATGGTGATTT-T----ATAAACTGCTT---G-TTGTGTAATATTGGA-----------ACTATTGTATT-------------TG-AACCAGTGTAACAATATAA---AC-AGCT
gi|12 : tgtttctaaattCCTCCA--AAAA-TAA-T-CCCA-CTTTTCTTGAATATTTGAAGGAT-ATCCCTGGAA--TCC-TGAGACTGCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGG----AAT-TCAGG-ACTACTTATTCCTGC----AT-T-A-GGAC--AAAT-A---CATT-AC--TCAA-ATGT--C-CT--G--------------------------------CAAA-T-TCC---C-AA--------TACCACTGCAGA-TG----TTTT-ACAGGAC-TCTTCTTTGT-TTTTT---CA-GGACT---TACT--G-----AT-GA-AATAA----A-AGT-----T--ATAA-TCCC------TCAAATTTCTA-AA--A--GTCTCAA-AC-ATGA-TA---TATTCAAGA-CA-ATGCA-GG-ACATTAT-ATCGCTTTT-C-AGGA-CTTGTTGACACTTGATAAAGC-AT-GTGCAAC--AAA-GTCT-TGGA-CTTTCATTACAGTGTt
gi|13 : CTTCTTCTCTAGTCCTAA-TGCAGGTGGGATTAAGTATCAGG-ACT-CTTAATTCTGCTCAAGT-TAT-GTCCTTAAATTATCC-AGTAAC-ATTAAAGTGTGAC-TTT-GT--AGGAACT--TGTAGG-----------ACTCAAC-TG-CCT-GCAAA-TTCCCACTACCACTGCAGA-TGCT--TTTTAACAGGAC-TTTCTTTTG--TTTTCTTACA-GGACT---TGCTC-GA----AT-GACAATAAGAATA-GAG-----TTAGTAAGT-CC------TCATATTTCCT-AACCG--GTCTCACGAC-ATAATTAAATTATTCAGGA-CA-ATGGA-AGCACActa
gi|14 : -CCAAGGAAAAAATGAACTGTTATCATTT-AGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGCAGTTGTGGTTTTTACTACTAC-TTGTAAATTGCTAAGAA--TTCATTATAAGCAGTTAATTCTTAGCAGTTTC-ACTTAT-TAAGg
gi|15 : tCCTCCA--AAAA-TAAAT-CCCA-TTTTCTT-GAATATTTGAAGGAT-ATCCCTGGAAG-TCT-TAAGACTTCCTTTTCCAG-TCCCACTTTT-TTCT-TTCGTAA-TGCAG-TGGGAT-AA-T-TCAGG-AATTCTGATTCCTGC----AT-T-T-GTCCTTTAAT-ATCCCAGTAAC-ATTAA-GTGTCACTTT--GTCAAGGAACT--TTTAGGACAAATACATTACTCAAA-TGTCTT-GC-AATTTCCCACTACCACTGCAGA-TGAT--TTTT-ACActgagtctatcagttattatattttttaaaagcagttcaattcatttagtcctaataaatatctaactttgcaaactggacaagtgca
gi|16 : ------AT-TAT---T----------TTCA-A---TT------TATT---C-CT-T-T---TT-CA-GAGCGT----TC---TT--GGG-------C--T-GTTC-TTC-ATAAAAG-T-CAGATACTAT-C-G---ATGTGAAT-AC-CCAAA-A-------GCA---GG--TG-T-----T---A--AAT-TGAATGAAG-----A-ATAAA-GAA-TC--AC---A--CTCTATCAAA------T-GCATGCCCG-T--T------CCAT----G--CCCAC------CCTT------TCCATAT-GAG-TGTA-----------A-TGA--GACCGCA-A-C-AAATGTGTT-T------CAACTTT-----------GTAA------GC-AC---
gi|17 : ttattttcTTCTTCCAATATTCGTCGAGGCTAATATTT--------GAA-CTG-G-TCTCC-GGTTTC-CGGAN-N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGATTTTTGTCGCAGGACGGA-AACCCTC----CCATGGCC--AGCC--CGCGG-CTCCTCTTA-C-AGTAA-GTCCATTTTG-
gi|18 : ggtcgccTA--------GCTTTGTT-T--TATAT---AAAT-A-TACCA--------------TTGT------AT-TA----T----------TTCA-A-T-TT------TATT---T-C--T-T---TTCCA-GAGTGT----TG---CC--AGG-----CTC--T-TTTC-TTC-ATGGAAG-T-CA-----TGC-A-C---AT-----T-AT-CCAAA-A-------TGA---GG--TGTT-----T---ATCAAC-T---TGTGA-----A-ATGAA-GGACTA--GC---A--C--------ATACATGT-A-------G-T--T------TTAT----
gi|19 : gtaatatggtgtgagggtcC-TTTCTTTTA--TTTTT---CA-GGACTAAGTACT--GA-----T-GA-AATAA----A-AAAAAAGTT--ACAAGTCCC------TCAAATTTCTA-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGA-CA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGGT
gi|2 : CCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGATTATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTA-C-ATTAA-GTGTGAC-TT--GT--AGGAACT--TGTAGC-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGAATGGT--TTT--ACAGGAC-TTTCTTT-G--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AAG-----T--ATAAGTTCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAAAGTCT-TGGA-CTTTC-GTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT--TATTT-AGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATT----GGCAGTTTT-CTAA--CAGTTCCAAGC-----------TTACAAATATATTGTGAA------------TTTATT-TAA------AATTCT--GTAA---CTACATGTATAAGATTTTTTTTTTTTTTAAGTTTTG--ATTTACTAAGAAAGTA--TTTATGAAATTAACATACATATTTGCAAGGTT--AAATTATTTAAATCAACTTGATTTATAATTTT-CAACCAGAAATGCAA-TAGCAAATCAAT-CAA--TA-ATCAATAATACCGTTGGACAGA-C-TATATCAAT---------------T----------------CGTGTCATTTT---GT-CGATCGGGTTCAAAAA-GCATCGGTGTGTGT-GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA---GATT-----GGAGAGAGGCATGGTCCGCCTT-TTTGAGTTCTTCCGAGATTCGTGTAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAG-T-ATTGAGTCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAGAGACCC-CGGGACGAAGGCCCTCGTCGTCGCGG--TCC---TA-C-ACCGA-GTCCATTTTG-AAATGGAATGTAAAATGTAGAG-TT-GGAT---C---T----TACTCAATTA-TT-TTG----TTTGA-TTTATA-ATTT-ATTTA----A-TT--TGT----------------GA----GAT--C--G---CAT-T--ATCC-T--C-TG--TGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AAAATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TA-A-A---TGTTATA--------ACTTTGTT-A--TAAAT---TAAT-ACTACCA--------------TTGT------AT-TAT---T----------TTCA-A-T-TT------TATT---T-C--T-T---TT-CA-GAGTGT----TG---CC--AGG-----CTC--T-TTTC-TTC-GTGGAAG-T-CA-----TGTGA-G---AT-----T-AT-CC-AA-A-------TCG---GG--TG-T-----T---ATCAAC-T---TTGGA-----A-ATGAA-GAACTT--GC---A--C--------A------T-A---------T--T------CTAT----A--TCCTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGA---TTATTG-TG-G-ATAAA--A-TTAACG-TTGT----TGTTGG------------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCTca
gi|20 : cCTGCA-AAC-AAACATGTTCT------CAACTTT-----------GAGA-----GAG-AC-----AC--TCTAAA-TTGCGA-T-GAA-A--TGGATGGAAC-TGACAACTGAAG--T--TTA-TG-GCATGAA--ACT----G-TGAT----TGTTGGACTAAAT-----A---------T-------------TA-AACAAG
gi|21 : tgaCCATTGATT-CCGT-AAATTCACA---CCAGT--G-AACAAAGAATT------TGTG-AACAGCTGTTCTG---------AT-CCAGATGT--TA-TGAGTGCA-CATTTTATACTCAGTATT--AT-AAAC-TGGT
gi|22 : acaggcaagtttT-TC-ATTC-T--C-TG-TTGTTT------TA-------ATGAT----ATAACCCCA-TCGATGT------------TAA-AATATTT---GGA-CTC-----TC-ACAAA--T-G-TTGCA-TTTT---GCAC-CATAGCCA----T
gi|23 : CCTCCA--AAAAATAAATACCCG-CTTTCTT-GAATATTTGAAAGGA-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAGTTCCCACCT
gi|24 : -TTTCTTTTG--TTTTT---CA-GGACT---TACT--GATGACAT-AA-AAAAA----A-AGA-----T--AAAAGTCCC------TCAAATTTCCTAAA--A--GTCTCA
gi|3 : -CCAAGGAAAAA-TGAACTGCT--TATTTTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATTT---GGCAGTTTT-CTAA--CAGTTCAAAGCAGTTGTGGTT-TTACTACTAC-TTGTAAACTGCTAAGAA--TTCAGTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTT--ATTTG----ATTTACC--GTTACT---TTCCTGAA-TTAAAATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGGAAATCAATACAA--TATATCA-TAATACCGTTGTACAGAAC-TGTATCAAT---------------TAGTTTTGAAAGATATTCGTGTCATTT--A-AT-CGATCGGGTTCAAAAAAGCATCGG-GTGTGTTATGCGTCAATTTAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGGATGGCGCGCGTTTT-AACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--GGA-CAAAGA-------------TAGCTGCTGTTCTTTAAA-GGATAT-CCAGATGTTCTA-TGAGTAAG-TATTT--TACTGTGTATTTCA---GAC-TGATGATTTTTTAAT-CTCAGCGA---GATTTGTTTGGAC---TGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATATTTCATTACTTGGA-CT--G-TCGCC-G-TCTT-CGAAG-T-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG--ACCC-CGGGACGAAGGCCCTCGTCG-CGCGG-CTCC---TA-C-ACCGA-GTCCATTTTG-AAATGGAATGTAAAATGTAGAG-TT-GGGA---C---T----TACTCAATTATTT-TTG----TTTGATTTTATA---TT-ATTTAATATA-TT-CTGTTTCATTGTTAAAACCCGA----AAT--CAGA---CATATCAATCC-T--C-TGATTGTTT------T
gi|3 : TTTGTTGA--AAAAT---TAATTA-TACCA--------------TTGTGTATTAAT-TATA--T----------TTCA-A-T-TTATCCTCTATTCAAT-CAAT-TTCATT-CA-GAGGGTGATCTGTGCCC--AGG-----CTCGTT-CTTA-CTT-GTGGAAGTT-CA-----TGTAA-G---ATGG---T-AT-CC-AA-A-------Ttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggatttgttgaaaaattaattataccattgtgtattaattatatttcaatttatcctctattcaatcaatttcattcagagggtgatctgtgcccaggctcgttcttacttgtggaagttcatgtaagatggtatccaaataaatggatat
gi|4 : ccaaggaaaaatgaactgcttattttagcagttgctaggcagttctttggcagttaagagattatttggcagttttctaacagttcaaagcagttgtggttttactactacttgtaaactgctaagaattcagtataagcagttaattcttagcagtttctacatgtataagatttttttttttttatttgatttaccgttactttcctgaattaaaatacatatttgcaaagtttaaattatttaaatcaacttgatttataattttcaatcagaaatgcaataggaaatcaatacaatatatcataataccgttgtacagaactgtatcaattagttttgaaagatattcgtgtcatttaatcgatcgggttcaaaaaagcatcgggtgtgttatgcgtcaatttaaataaaaaggaccgataactctgtgcaaggatggcgcgcgttttaacagattcaggattgcgcctttgattgctgtaaaatgacagtctcagtggacaaagatagctgctgttctttaaaggatatccagatgttctatgagtaagtattttactgtgtatttcagactgatgattttttaatctcagcgagatttgtttggactgcatggtcgccttcttgagttcttccgagattcgtcgaagctaatatttcattacttggactgtcgccgtcttcgaagtattagatcaagcctcgacgaatatttttgagattaatgatttttgtgcaagacgagaccccgggacgaaggccctcgtcgcgcggctcctacaccgagtccattttgaaatggaatgtaaaatgtagagttgggacttactcaattatttttgtttgattttatattatttaatatattctgtttcattgttaaaacccgaaatcagacatatcaatcctctgattgtttttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggaAA--CA-ACCA---ATAGCATTGGACA--AC--------AT---------------T----------------T-TATCATTTT-AAGTACAANNNNNNNNNNNNN-NNNNNNN-NNNNN--GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTT--GACA-GATTCAGG-ATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA---GATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCT-ATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGTT-ATTAGATC-AGCCTCGACGAATATTTTTGAGATTA---------------ATGA-TTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGG-CTCC---TACC-ACCGA-GTCCATTTTGAAAATGGAATGTAAAATGTAGAGTTT-GGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATTT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--T-G-TTGCA-TTTT---GCAC-CATAGCCA----TA-A-AT--TGTTATA--------ACTTT-TT-A--TAAAT---TAAT-A-TACCA--------------TTGT------AT-TAT---T----------TTCA-A-T-TT------TATT---T-CT-T-T---TT-CA-GAGTGT----TG---CC--AGG-----CTC--T-TTTC-TTC-GTGGAAG-T-CA-----TGT-A-G---AT-----T-AT-CC-AA-A-------TC----GG--TG-T-----T---ATCAAC-T---TGTGA-----A-ATGAA-GAACTT--GC---A--C--------A------T-A-------G-T--T------TTAT----A--T-CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-TAA-AAAAGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-------------A---------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCTaaatggatat
gi|5 : GCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGTTG-CAAGCATGGCGCGCGTTTTTGACA-GAT-CAGGGATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAA-GAATTA--CTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCATTAGACCTGATGATTTTTTAATTCTCAGCGAA--GATT-----GGAGAGAGGCATG--TCGCCTTTCTTGAGTTCTTCCGAGATTCGT-GAAGCTA-TATTTCATTACTTGGAACTTAG-TCGCCAG-TCTTTCGAAG-TTATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGGTCTCC---TA-CCACCG--GTC-ATTTGA-AAATGGAATGTAAA-TGTAGAG-TTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTTTATTTA----A-TTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCCGT--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGGCTTGCATTTTT---GCAC-CATAGCCA----TA-A-AT--TGTTATA--------ACTTT-TT-A--TAAAT---TAAT-A-TACCA--------------TTG-------A--TAT---T----------TTCA-ATT-TT------TATT---T-C--T-T---TT-CA-GAGTGT----TG---CC--AGG-----CTC--T-TTTC-TTC-GTGG-AG-T-CA-----TGT-A-G---AT-----T-ATCCC-AA-A-------TC----GG--TG-T-----T---ATCAACTT---TGGGA-----A-ATGAA-GAACTT--GC---A--C--------A------T-A-------G-T--T------TTAT----A--T-CTT------ACTT------TTTCGGTCGAG-TGAATC--A----ATT-TGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-ATT-AAACAAATGGACGGAAC-TGA-ATGTGGA---TTA-TG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-------------A---------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCT
gi|6 : GCGTCAATTCAAATAAAAAGGAACCGATAACTCTGT-GTCAAGCATGGCGCGCGTTTT-GACAAGATTCAGGGATTGCGCCTTTGAT-GCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATT-CAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAG-T-ATTAGATCAAGCCTCG-CGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGGTCTCC---TA-C-ACCGC-GTCCATTTTG-AAATGGAATGTAAA-TGTAGAG-TT-GGAT---C---T----TACTCAATTATTT-TTG----TTTGACTTTATA-ATTT-ATTTA----A-TTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-AC-AA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TA-A-AT--TGTTATA--------ACTTT-TT-A--TAAAT---TAAT-A-TACCA--------------TTGT------A--TAT---T----------TTCA-A-T-TT------TATT---T-C--T-T---TT-CA-GAGTGT----TG---CC--AGG-----CTC--T-TTTC-TTC-GTGGAAG-T-CA-----TGT-A-G---AT-----T-AT-CC-AA-A-------TC----GG--TG-T-----T---ATCAAC-T---TTGGA-----A-ATGAA-GAACTT--GC---A--C--------A------T-A-------G----T------TTAT----A--TCCTT------ACTT------TTCGGGTCGAG-TGAATC--A----ATATTGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--T-TGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGG------------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCTt
gi|7 : GAT---CCTAT----TACTCATTAATTTATTGATCATTT----TTATA-AT---GATTA----A-TT-CCAT----------------GATGAAGATGTC--GGGCCAT-TC-ATCC-TACCGTG-TTGTTTATATAGTATTCTCACGTAATTCATAGAGCAATTTCCGATGTGTAGCTATTGCACAAGAATCTTTTACGGA-C-CACGCCCT-ACAAAAATAG-TTGCA-TTTTTATGCAAACATAGCCAAGATTA-ATA---TGTTGTATTTTATTAACTTTGTT-AATTAGATATATAA--A-TACCA--------------TTGA------ATATAT---TGTAACTTAGATTCATA-TGTT------TATT---TGC--T-T---TTACAAGAGTGT----TG---CCG-AGGGCGTGCAT--T-TTTG-TCA-GTGGAAG-TGCA-----TGT-ATG---AT-----TTAT-CT-GA-AAATAAGATTGT--GGCATG-T-----TTTAATCAAC-T---TGCTA-----ATATGAA-G-ACCG--GCAAAA--C--------A------TAA-------G-T--TGTGAGGCTATTTTAA--TCCATGAGTAAACTTGATAAATTCGGGTCGAG-CTGATCA-ATCTTAAA-AGAAGAGCTGGGAA-CAAAAAGTGTTGTATACAGAAGCTTTGATGG------GTGA-----TGCTACACTTAGTTATCTGAA-CTGt
gi|8 : TTGATATTA---------------ATTATTT--GT-GCAAGACGA---ACCC-CG--ACGAAGGCCCTCGTCGCCGC---TCCC---TA-C-ACCGA-ATCCATTTTG-AAATG-AATGTAA--TG-AGA--TT-GGAT---C---T----TACTCAAT-ATTT-TTG----T--GA-TTTTTA-ATTT-ATTTA----A-TC----T----------------GA----GAT--C--G---C---TC-ATCC-T--C-TG-TT-TTT------TA-------ATGATATATATAACCACT-CCGATG-------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TG---TGCA-TTTG---CCAC-CATA-CCA----TT-A-ATATTGTTATA--------AC--TGTT-A--TAAAT---TA---A-TACCA--------------TTGT------AT-TA----T----------TTCA-A---TT------TATT--------C-T---TT-CA-AGGTG-----------C--AGG-----CTA--TCTTTC-T---GTCGA---T-CA-----T-----G---AA-----T-AT-CC-AA-A-------ATGCATGT--TA-T-----T---ATCAAC-T---TGT-A-----A-ATGAA-GAAC-T--GC---A--C--------A------T-A-------GATA-T------TTAT----A--TCC-T------AC--------TCCGA--CGA---GATTCA-A----ATA--AA--AGCTGC--A-C-AAATG-GTT-T------CAACTTT------------TGA------GC-AC---TAG---TCTGAATTTGC-A-T-AAA-AAATGGACGGAACTTGA-ATGTTG-----TATTGATGTG-A-AAA--ACTTAACG-TT-T----TGTTGAATATACTGTATTA---------T-------------TG-AATCAGTG-AAT--TATAATATAC-AGCT
gi|9 : cCGA-GTCCACTTTG-AAATAGA-TGTAAA-TGTAGAG-TTTGGATAAGT---TGTAATACTCAATCATTT-TTG----TTCGA-TTTTTTTATTT-TTTTA----A-TT-CTGT----------------GA----AAT--C--G---CAT-TC-ATCA-T--C-CG-TTGTTT------TA-------ATGAT----ATAACCCCT-CCAGTGT------------TAC-AATATTT---GGA-C-C-----CCCACAAA--TGA-T-GCA-TTTT---GCAA-CATGGCTA----TGTG-A---GGGCCTA--------GCTTTGTT-A--TAAAT--------A-TTCCA--------------TTGT------TT-TATAATT----------TTCA-A-T-TT------TATT---T-C--T-T---TTTCA-GAGTGT----TG---CC--AGG-----CTC--T-TTTCCTTT-GTGAAAG-T-CA-----TGC-A-T---AT-----T-AT-CC-AA-AA------TGA---GG--TGCT-----T---ATCAAC-T---TGTGA-----A-ATGAA-GGACTA--GC---A--C--------A------T-A-------G-T--T------TTAT----A--CCCTCTG----ACTT------TCCGGGTCGAG-TGAATCT-A----ATA-TGA--GGCTGCG-A-C-AAATGTGTT-T------CCACTTT-----------GTGAACGCAGGC-AC---TAGT--TCTGAA-TTTT-A-T-AAT-AAATGGACAGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATGAA--ACCGATTG-TTGTAAA-TGTCGGAATATATT----A---------T-------------TG-AACAAGTG-AATGCTAT-ATATAC-AGCTt
Alignments
lowQualScore : 11111111111111111111111111111111
lowQualScore : 1 1 1 1 1111 333333333333 2 11 11 111 111 11111111111 1 1111 1111 111111 11111 111 1 222222 1 1 11 1 1 11 2 111 22 22 1 3333 1 11 55555555555 1 2222222 111111 222 2222 4444444444444 11 1 22 1 1 11 1 11 111 11111111111111111111111111111111 2222 1 1 1 11 1 1 1 222 11111 11 1 1 333333333333333 1 1 1 1 2 11111111 11 2222222222222222 111111 1111111 222222222222 11111 11 1111111111 1111 11111 1111 11111111111111 11111111111111 11111111 22222 1111 11111 1 2222222222222 1 11111 11111 2222222 2222222222222222222222222222222222222 111111 111111 1111111 1111111 22222222222 111111 111 1111 8888888888888888888888888888888888888
lowQualScore : 99 6 3 6 6 5 3 6 77 1 6 6 6 3 6 6 2 6 6 3 4444 6 888 3 6 7 6 6 2 99 99 2 99 3 444444444444 6 6 6 0 6 9999 44 5 33 000 5 000 0 44444444444 1 2222 5 2222 5 666666 5 44444 6 6 6 111 6 5 6 6 6 8 3 8 8 8 888888 3 0 0 3 33 0 0 9 0 88 8 0 999 0 55 55 0 2222 0 11 5 00000000000 1 8 5 3 9999999 6 3 777777 66 111 3 3 5555 7777777777777 7 88 3 00 3 3 7 33 0 33 2 3 444 99999999999999999999999999999999 2 6666 0 0 0 22 6 6 6 6 6 5 5 1 77 5 5 999 1 5 3 5 5 77 5 5 5 7 6 444 66666 55 66 6 77 2 5 77 5 5 5 5 1 111111111111111 2 5 66 5 77 0 888 0 4 5 2 0 777 00000000 1 4 9999 1 8 2 4 4 9999 44 9999999999999999 9999 66 66 777 4 4 4 55 4 4 111111 4444444 7 4 222222222222 4 777 4 4 11111 4 66 22 4 777 4 9999999999 0 0000 11111 4 3 3 55 0000 3 3 999999 3 66666666666666 3 555 11111111111111 11111111 555 11111 3 0000 555 77 88888 44 3 3 3 3 3 3 88888 888 22222 3 3 555 0 3 6666666666666 55 0 55555 3 55 44444 3 3 2222222 666 55 6666666666666666666666666666666666666 7777 55 1 777777 111111 4 4444444 4 55 3 3 3 7 6666666 66666666666 555555 3 666 55 4 4 4 4 4 4 4 333 4 4 4 66 4 7777 2222222222222222222222222222222222222 8 5 0 0 5
lowQualScore : .. . . . . . . . .. . . . . . . . . . . . .... . ... . . . . . . .. .. . .. . ............ . . . . . .... .. . .. ... . ... . ........... . .... . .... . ...... . ..... . . . ... . . . . . . . . . . ...... . . . . .. . . . . .. . . ... . .. .. . .... . .. . ........... . . . . ....... . . ...... .. ... . . .... ............. . .. . .. . . . .. . .. . . ... ................................ . .... . . . .. . . . . . . . . .. . . ... . . . . . .. . . . . . ... ..... .. .. . .. . . .. . . . . . ............... . . .. . .. . ... . . . . . ... ........ . . .... . . . . . .... .. ................ .... .. .. ... . . . .. . . ...... ....... . . ............ . ... . . ..... . .. .. . ... . .......... . .... ..... . . . .. .... . . ...... . .............. . ... .............. ........ ... ..... . .... ... .. ..... .. . . . . . . ..... ... ..... . . ... . . ............. .. . ..... . .. ..... . . ....... ... .. ..................................... .... .. . ...... ...... . ....... . .. . . . . ....... ........... ...... . ... .. . . . . . . . ... . . . .. . .... ..................................... . . . . .
lowQualScore : 22 7 5 7 7 5 3 7 77 5 7 7 7 3 7 7 0 7 7 5 2222 7 777 2 7 3 7 7 5 88 22 5 22 5 888888888888 7 7 7 0 7 3333 00 7 66 000 7 000 1 11111111111 4 1111 7 1111 7 444444 7 66666 7 7 7 777 7 0 7 7 7 0 8 0 0 0 888888 2 0 0 2 22 0 0 8 2 33 0 4 222 8 44 88 6 2222 6 22 0 55555555555 0 8 5 2 8888888 5 2 000000 88 555 2 2 3333 0000000000000 3 33 3 77 3 3 3 88 0 22 5 2 000 88888888888888888888888888888888 5 5555 0 0 0 55 7 7 7 7 7 0 0 4 99 7 7 111 4 7 0 7 7 99 0 7 7 3 7 777 77777 77 00 7 33 0 7 11 7 7 7 7 4 222222222222222 4 0 44 0 55 0 888 0 4 0 4 0 888 99999999 0 4 4444 1 9 2 4 4 4444 44 4444444444444444 4444 11 11 888 0 0 0 55 0 0 555555 4444444 7 4 888888888888 4 888 4 4 11111 4 11 99 4 888 4 2222222222 1 6666 11111 4 6 6 00 8888 6 6 666666 3 00000000000000 3 888 44444444444444 44444444 888 77777 3 4444 888 99 33333 66 3 3 3 3 3 3 33333 333 99999 3 3 888 0 3 2222222222222 00 9 55555 6 00 11111 6 6 2222222 444 00 6666666666666666666666666666666666666 7777 55 1 000000 555555 0 1111111 0 55 6 6 6 3 0000000 44444444444 555555 6 444 55 0 4 4 4 4 4 4 333 4 4 4 11 4 2222 7777777777777777777777777777777777777 9 0 4 4 0
consensus : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCT-ATTATTTAGCAGTTGCTAGGCCAAGTTCTTTGGCAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAAT--ATTGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTC------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGA-----------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
Reference ( family-3080 ) : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCT-ATTATTTAGCAGTTGCTAGGCCAAGTTCTTTGGCAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTT-GGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAA---ATTGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTC------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGA-----------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
gi|1 : CCTCCA--AAA--TAAAT-CCCA-CTTTCTT-GAACATTTGAAGGATCATCCCTG-AAG-TC--TGAGACTGTCTTTTCCCG-TCCCACTTCT-CTCT-GTCCTAAATGCAG-TGG-AT-AAAT-TCAGGGACTTCTTATTCCTGC----ATGT-T-GTCCT-AAAT-ATCCCAGTAAC-ATTA--GTGTGACTTT-GT--AG-AACTATTGTAGG-----------ACTCAAAATGTTCTTGC-AAATTCCCACTACCACTGCAGA-TGGT--TTT--ACAGGACATTTCTTTTG--TTTTT---CA-GGACT----ACT--GA----ATTGATAATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--AA-GTCTCAC-ACCATAA-TA---TATGCAG-ACCA-ATGCA-GG-ACATTAT-AT-GCTTTT-CCAGGA-CATGTTGATA------AAAGT-ATAGTGCAACAAAA--GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT---TATTTAG----------GC--AGTTCTTGGGCAGTTAA--GAGATTATTT---GGCAGTTTCT----AACAGTTC-AAGC------------TACAA-TATATTGTAAA---------ATT--TTAT------TTAAATTTTTGTAA---CTACATGTATAAGATTTTTTTTTTTTTTT--TTT---TTTTTTAT--TTACTAAGAAAGTAAATTTATGAA-TTAACTAACATACTTGCAAAGTTTTAAATTATTTAAATCAACTTGATTTATAATTTTTCAATCAGAAATGCAAATAGCAAATCAATACAAAATA-ATCA-TAATACCGTTGGACAGAACATATATCAATGTTATTGAAAGATATT----------------CGTGTCATTTTTA-GT-CGATCGGGTTCAAAAA-ACATCGG-GTGTGTTATGCGTCAATTCAAATAAAAACGA-CCGATAACTCTGT-G-CAAGCATGACGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGTTGG-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-CGATATACCAGATGTTATACTGAGTAAGATATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAATTG-TT-----GGA---CTGCATGGT-CGCC-T-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATA-TTCATTACTTGGA-CTT-GTTCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCGACG-ATATTTTTGAGATTA---------------ATGA-TTTTGT-GCAAGACGAG-GACCC---GGACGAAGG-CCTCGTCGGCGCGG-CTCC---TAC-ACCGAGGTCCATTTTGAAA-TGGAATGTAAAACGTAGAGTTGGGAT---C---G----TACTCAATTATTT-TTG----TTT-A-TTT-TA-ATTT-A-TTA----ATT-CTGT----------------GA----GAT--C--G---CA--TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATATATATAACCACT-CCGATGT------------TAA-AATATTT---GGACC-C-----CC-ACAAA--TG---TGCA-TTTT---GCAC-CATAGCCAT---TAAT--ATTGT----TA-----T-AACTTTGTT-A--TAAAT---GAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------T-TT---C-T--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC----TTT-C-TTCTGTGGAAG-T-CA-----T-T-A-GAT-----T-AT-C---CAAA-A-------TGG---GA--TGTTT-----ATCAAC-TTG--TGA-----A-ATG-AGA-ACT-------GC---A--C---------------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTC-GGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------CAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-AT-AA--ACTTAACGTTTGT----TGTTGGA-----------A---------TATTCTTGTATTAATG-AAAAAGTG-AATGATATTAAATACGAGCT
gi|10 : CCTCCACAAAAA-TACTT-CCCAACTTTACTTGACTATCTTTAGGAT---TCCTGGAAGATCCATGAGACTCCTTTTTTCCG-TCCT-----T-CTCT-G--CTAAATGCAG-TGGGAT-AA-T-TCAGG-ACTTCTTATGTCTGC----AT-T-TTGTCCTTAAA--A--CCAGTAACCATTAA-GTGTGACTTTTGT--AGGAACT--TGAAGG------------CTCAAT-GGTCCT-GC-AAATTCCCACTACACCTGCAG--TGGTCATTTT-ACAGGAC-TTTCCTTTGGTTTTTT---CACGGACT---T-CTATGA----ATTGA-AATAA----AGAA----GTTA-TAAGTCCCGCCCATTCAATTATTCT-AA--AAAGTCCTAC-AC-ATGA-TA---TATTCAG-ACAAGATGTACGG-ACATTATGATTGCTTTTTC-AGGAACTTCTTGATA------A---TGAT-GTGCAACAAAAA-GTCTCTGGAACTTTCTGTACAGAGTTCTAACTCCAAGGAAAAAATGAACTGTT-ATCATTTAGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGC
gi|11 : TTTGTT-T--TAAAT----AAT-A-TATCACTAT------AT--AT---C----------CATA-A-T-TGTATTATT------TATT---TTC--TT---TTTACCACA-GAATGTG---TG---CCTAAGG-----CTC--T-TTTTC-TTC-ATGGA-G-T-CA------GC-ATGAT-----T-AT-TATTC-AATG-------TAA---AG--TG-TTTATCTACCGAC-TTG--TGATTTTCA-ATGAAGGGACTCTAGCAAGC---AGAC--------AAA----T-A-------G-TCAT------TTAT----ATCTCCTG------ACTT------TCCGGGTCGCGATGAATCCTA----ATA-TGA--AGCTGCG-A-C---ATGTGTT-TC-----AAACTTTTAAATAGAATCGT-A-----GGC-AC---TAGT--TGTGAA-TTGC-A-TAAAA-AAATGG-CGGAAC-TGT-AT-TGAATGGTGATTT-T----ATAAACTGCTT---G-TTGTGTAATATTGGA-----------ACTATTGTATT-------------TG-AACCAGTGTAACAATATAA---AC-AGCT
gi|12 : tgtttctaaattCCTCCA--AAAA-TAA-T-CCCA-CTTTTCTTGAATATTTGAAGGAT-ATCCCTGGAA--TCC-TGAGACTGCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGG----AAT-TCAGG-ACTACTTATTCCTGC----AT-T-A-GGAC--AAAT-A---CATT-AC--TCAA-ATGT----------------CC--TG------------------CAAA-T-TCC---C-AA--------TACCACTGCAGA-TG----TTTT-ACAGGAC-TCTTCTTTGT-TTTTT---CA-GGACT---TACT--G-----AT-GA-AAT-A----A-AA----GTTA-TAA-TCCC------TCAAATTTCTA-AA--A--GTCTCAA-AC-ATGA-TA---TATTCAAGA-CA-ATGCA-GG-ACATTAT-ATCGCTTTT-C-AGGA-CTTGTTGACACTTGATAAAGC-AT-GTGCAAC--AAA-GTCT-TGGA-CTTTCATTACAGTGTt
gi|13 : CTTCTTCTCTAGTCCTAA-TGCAGGTGGGATTAAGTATCAGG-ACT-CTTAATTCTGCTCAAGT-TAT-GTCCTTAAATTATCC-AGTAAC-ATTAAAGTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAC-TG-CCT-GCAAA-TTCCCACTACCACTGCAGA-TGCT--TTTTAACAGGAC-TTTCTTTTG--TTTTCTTACA-GGACT---TGCTC-GA----AT-GACAATAAGAATA-GA----GTTAGTAAGT-CC------TCATATTTCCT-AACCG--GTCTCACGAC-ATAATTAAATTATTCAGGA-CA-ATGGA-AGCACActa
gi|14 : -CCAAGGAAAAAATGAACTGTT-ATCATTTAGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGCAGTTGTGGTTTTTACTACTAC-TTGTAAATTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTC-ACTTAT-TAAGg
gi|15 : tCCTCCA--AAAA-TAAAT-CCCA-TTTTCTT-GAATATTTGAAGGAT-ATCCCTGGAAG-TCT-TAAGACTTCCTTTTCCAG-TCCCACTTTT-TTCT-TTCGTAA-TGCAG-TGGGAT-AA-T-TCAGG-AATTCTGATTCCTGC----AT-T-T-GTCCTTTAAT-ATCCCAGTAAC-ATTAA-GTGTCACTTT-GTCAAGGAACT--TTTAGGACAAATACATTACTCAAA-TGTCTT-GC-AATTTCCCACTACCACTGCAGA-TGAT--TTTT-ACActgagtctatcagttattatattttttaaaagcagttcaattcatttagtcctaataaatatctaactttgcaaactggacaagtgca
gi|16 : ------AT-TAT---T----------TTCA-A---T-------T------TATT---C-CT-TT---TT-----CA-GAGCGT----TC---TT--GGG-------C--T-GTT-C-TTC-ATAAAAG-T-CAGATACTAT-C-GATGTGAAT-AC-C---CAAA-A-------GCA---GG--TG-TT-----A--AA--TTGAATGAAG---A-ATAAAGA-A-TC------AC---A--CTCTATCAAA------T-GCATGCCCG-T--T------CCAT----GCC--CAC------CCTT------TCCATAT-GAG-TGTA-----------A-TGA--GACCGCA-A-C-AAATGTGTT-T------CAACTTT-----------GTAA------GC-AC---
gi|17 : ttattttcTTCTTCCAATATTCGTCGAGGCTAATATTT--------GAA-CTG-G-TCTCC-GGTTTC-CGGANN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGATTTTTGTCGCAGGACGGA-AACCCTC----CCATGGCC--AGCC--CGCGG-CTCCTCTTAC-AGTAA-GTCCATTTTG
gi|18 : ggtcgcc-----T-AGCTTTGTT-T--TATAT---AAAT-A-TACCATTGT------AT-TA----T----------TTCA-A-T-T-------T------TATT---T-C--TT---TTC----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-ATGGAAG-T-CA-----TGC-A-CAT-----T-AT-C---CAAA-A-------TGA---GG--TGTTT-----ATCAAC-TTG--TGA-----A-ATGAAGG-ACTA------GC---A--C--------ATACATGT-A-------G-T--T------TTAT----
gi|19 : gtaatatggtgtgagggtcC-TTTCTTTTA--TTTTT---CA-GGACTAAGTACT--GA-----T-GA-AATAA----A-AAAAAAGTTA-CAAGTCCC------TCAAATTTCTA-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGA-CA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGGT
gi|2 : CCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGATTATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTA-C-ATTAA-GTGTGACTT--GT--AGGAACT--TGTAGC-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGAATGGT--TTT--ACAGGAC-TTTCTTT-G--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GT-A-TAAGTTCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAAAGTCT-TGGA-CTTTC-GTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT---TATTTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATT----GGCAGTTTT-CTAA--CAGTTCCAAGC-----------TTACAAATATATTGT----------GAATTTATT-TAA------AATTCT--GTAA---CTACATGTATAAGATTTTTTTTTTTTTTAAGTTT---TG----AT--TTACTAAGAAAGTA--TTTATGAAATTAACATACATATTTGCAAGGTT--AAATTATTTAAATCAACTTGATTTATAATTTT-CAACCAGAAATGCAA-TAGCAAATCAAT-CAA--TA-ATCAATAATACCGTTGGACAGA-C-TATATCAAT---------------T----------------CGTGTCATTTT---GT-CGATCGGGTTCAAAAA-GCATCGGTGTGTGT-GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA---GATT-----GGAGAGAGGCATGGTCCGCCTT-TTTGAGTTCTTCCGAGATTCGTGTAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGT-ATTGAGTCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAGAGACCC-CGGGACGAAGGCCCTCGTCGTCGCGG--TCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTT-GGAT---C---T----TACTCAATTA-TT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT--TGT----------------GA----GAT--C--G---CAT-T--ATCC-T--C-TG--TGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AAAATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAA---A-TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-ACTACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGTGA-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTT--GGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A---------T--T------CTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGA---TTATTG-TG-G-ATAAA--A-TTAACG-TTGT----TGTTGG------------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCTca
gi|20 : cCTGCA-AAC-AAACATGTTCT------CAACTTT-----------GAGA-----GAG-AC-----AC--TCTAAA-TTGCGA-T-GAA-A--TGGATGGAAC-TGACAACTGAAG--T--TTA-TG-GCATGAA--ACT----G-TGAT----TGTTGGACTAAAT-----A---------T-------------TA-AACAAG
gi|21 : tgaCCATTGATT-CCGT-AAATTCACA---CCAGT--G-AACAAAGAATT------TGTG-AACAGCTGTTCTG---------AT-CCAGATGT--TA-TGAGTGCA-CATTTTATACTCAGTATT--AT-AAAC-TGGT
gi|22 : acaggcaagtttT-TC-ATTC-T--C-TG-TTGTTT------TA-------ATGAT----ATAACCCCA-TCGATGT------------TAA-AATATTT---GGA-CTC-----TC-ACAAA--T-G-TTGCA-TTTT---GCAC-CATAGCCA----T
gi|23 : CCTCCA--AAAAATAAATACCCG-CTTTCTT-GAATATTTGAAAGGA-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAGTTCCCACCT
gi|24 : -TTTCTTTTG--TTTTT---CA-GGACT---TACT--GATGACAT-AA-AA-AA----A-AA----GATA-AAAGTCCC------TCAAATTTCCTAAA--A--GTCTCA
gi|3 : -CCAAGGAAAAA-TGAACTGCTTATT--TTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATTT---GGCAGTTTT-CTAA--CAGTTCAAAGCAGTTGTGG-TTTTACTACTAC-TTGTAAACTGCTAAGAATTCAGTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTT-A--TTTGATTT----ACCGTTACT-----------TTCCTGAA-TTAAAATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGGAAATCAATACAA--TATATCA-TAATACCGTTGTACAGAAC-TGTATCAAT---------------TAGTTTTGAAAGATATTCGTGTCATTT--A-AT-CGATCGGGTTCAAAAAAGCATCGG-GTGTGTTATGCGTCAATTTAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGGATGGCGCGCGTTTT-AACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--GGA-CAAAGA-------------TAGCTGCTGTTCTTTAAA-GGATAT-CCAGATGTTCTA-TGAGTAAG-TATTT--TACTGTGTATTTCA---GAC-TGATGATTTTTTAAT-CTCAGCGA---GATTTGTTTGGAC---TGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATATTTCATTACTTGGA-CT--G-TCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG--ACCC-CGGGACGAAGGCCCTCGTCG-CGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTT-GGGA---C---T----TACTCAATTATTT-TTG----TTTGATTTTATA---TT-ATTTAATATATT-CTGTTTCATTGTTAAAACCCGA----AAT--CAGA---CATATCAATCC-T--C-TGATTGTTT------T
gi|3 : TTTGTTGA--AAAAT---TAATTA-TACCATTGTGTATTAAT-TATA--T----------TTCA-A-T-T-------TATCCTCTATTCAAT-CAATTTCATT-----CA-GAGGGTGATCTGTGCCC--AGG-----CTCGTT-CTT-A-CTT-GTGGAAGTT-CA-----TGTAA-GATGG---T-AT-C---C-AA-A-------Ttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggatttgttgaaaaattaattataccattgtgtattaattatatttcaatttatcctctattcaatcaatttcattcagagggtgatctgtgcccaggctcgttcttacttgtggaagttcatgtaagatggtatccaaataaatggatat
gi|4 : ccaaggaaaaatgaactgcttattttagcagttgctaggcagttctttggcagttaagagattatttggcagttttctaacagttcaaagcagttgtggttttactactacttgtaaactgctaagaattcagtataagcagttaattcttagcagtttctacatgtataagatttttttttttttatttgatttaccgttactttcctgaattaaaatacatatttgcaaagtttaaattatttaaatcaacttgatttataattttcaatcagaaatgcaataggaaatcaatacaatatatcataataccgttgtacagaactgtatcaattagttttgaaagatattcgtgtcatttaatcgatcgggttcaaaaaagcatcgggtgtgttatgcgtcaatttaaataaaaaggaccgataactctgtgcaaggatggcgcgcgttttaacagattcaggattgcgcctttgattgctgtaaaatgacagtctcagtggacaaagatagctgctgttctttaaaggatatccagatgttctatgagtaagtattttactgtgtatttcagactgatgattttttaatctcagcgagatttgtttggactgcatggtcgccttcttgagttcttccgagattcgtcgaagctaatatttcattacttggactgtcgccgtcttcgaagtattagatcaagcctcgacgaatatttttgagattaatgatttttgtgcaagacgagaccccgggacgaaggccctcgtcgcgcggctcctacaccgagtccattttgaaatggaatgtaaaatgtagagttgggacttactcaattatttttgtttgattttatattatttaatatattctgtttcattgttaaaacccgaaatcagacatatcaatcctctgattgtttttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggaAA--CA-ACCA---ATAGCATTGGACA--AC--------AT---------------T----------------T-TATCATTTT-AAGTACAANNNNNNNNNNNNN-NNNNNNN-NNNNN--GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTT--GACA-GATTCAGG-ATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA---GATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGTTATTAGATCA-GCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGG-CTCC---TACCACCGA-GTCCATTTTGAAAATGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TG--TTGCA-TTTT---GCAC-CATAGCCA----TAA---ATTGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TTT----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---G---TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC---TT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-TAA-AAAAGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-------------A---------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCTaaatggatat
gi|5 : GCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGTTG-CAAGCATGGCGCGCGTTTTTGACA-GAT-CAGGGATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAA-GAATTA--CTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCATTAGACCTGATGATTTTTTAATTCTCAGCGAA--GATT-----GGAGAGAGGCATG--TCGCCTTTCTTGAGTTCTTCCGAGATTCGT-GAAGCTA-TATTTCATTACTTGGAACTTAG-TCGCCAG-TCTTTCGAAGTTATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGGTCTCC---TACCACCG--GTC-ATTTGAAAA-TGGAATGTAAA-TGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTTTATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCCGT--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGGCTTGCATTTTT---GCAC-CATAGCCA----TAA---ATTGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTG-------A--TAT---T----------TTCA-ATT-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGG-AG-T-CA-----TGT-A-GAT-----T-ATCC---C-AA-A-------TC----GG--TG-TT-----ATCAACTTTG--GGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A-------G-T--T------TTAT----AT---CTT------ACTT------TTTCGGTCGAG-TGAATC--A----ATT-TGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-ATT-AAACAAATGGACGGAAC-TGA-ATGTGGA---TTA-TG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-------------A---------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCT
gi|6 : GCGTCAATTCAAATAAAAAGGAACCGATAACTCTGT-GTCAAGCATGGCGCGCGTTTT-GACAAGATTCAGGGATTGCGCCTTTGAT-GCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATT-CAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCG-CGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGGTCTCC---TAC-ACCGC-GTCCATTTTGAAA-TGGAATGTAAA-TGTAGAGTT-GGAT---C---T----TACTCAATTATTT-TTG----TTTGACTTTATA-ATTT-ATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-AC-AA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAA---ATTGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTGT------A--TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TC----GG--TG-TT-----ATCAAC-TTT--GGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A-------G----T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATC--A----ATATTGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--T-TGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGG------------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCTt
gi|7 : GAT---CCTAT----TACTCATTAATTTATTGATCATTT----TTATA-AT---GATTA----ATT-CCAT----------------GATGAAGATGTC--GGGCCAT-TC-ATCC-TACCGTG-TTGTTTATATAGTATTCTCACGTAATTCATAGAGCAATTTCCGATGTGTAGCTATTGCACAAGAATCTTTTACGGA-C-CACGCCCT-ACAAAAATAG-TTGCA-TTTTTATGCAAACATAGCCAAGATTAATATGTTGTATTTTA-----TTAACTTTGTT-AATTAGATATATAA--A-TACCATTGA------ATATAT---TGTAACTTAGATTCATA-TGT-------T------TATT---TGC--TT---TTA----CAAGAGTGT----TG---CCG-AGGGCGTGCAT--T-TTT-G-TCA-GTGGAAG-TGCA-----TGT-ATGAT-----TTAT-C---T-GA-AAATAAGATTGT--GGCATG-TTTTA--ATCAAC-TTG--CTA-----ATATGAAG--ACCG------GCAAAA--C--------A------TAA-------G-T--TGTGAGGCTATTTTAATC--CATGAGTAAACTTGATAAATTCGGGTCGAG-CTGATCA-ATCTTAAA-AGAAGAGCTGGGAA-CAAAAAGTGTTGTATACAGAAGCTTTGATGG------GTGA-----TGCTACACTTAGTTATCTGAA-CTGt
gi|8 : TTGATATTA---------------ATTATTT--GT-GCAAGACGA---ACCC-CG--ACGAAGGCCCTCGTCGCCGC---TCCC---TAC-ACCGA-ATCCATTTTGAAA-TG-AATGTAA--TG-AGA-TT-GGAT---C---T----TACTCAAT-ATTT-TTG----T--GA-TTTTTA-ATTT-ATTTA----ATC----T----------------GA----GAT--C--G---C---TC-ATCC-T--C-TG-TT-TTT------TA-------ATGATATATATAACCACT-CCGATG-------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TG---TGCA-TTTG---CCAC-CATA-CCAT---TAAT--ATTGT----TA-----T-AAC--TGTT-A--TAAAT---TA---A-TACCATTGT------AT-TA----T----------TTCA-A---T-------T------TATT--------CT---TT-----CA-AGGTG-----------C--AGG-----CTA--TCTTT-C-T---GTCGA---T-CA-----T-----GAA-----T-AT-C---C-AA-A-------ATGCATGT--TA-TT-----ATCAAC-TTG--T-A-----A-ATGAAGA-ACT-------GC---A--C--------A------T-A-------GATA-T------TTAT----ATC--C-T------AC--------TCCGA--CGA---GATTCA-A----ATA--AA--AGCTGC--A-C-AAATG-GTT-T------CAACTTT------------TGA------GC-AC---TAG---TCTGAATTTGC-A-T-AAA-AAATGGACGGAACTTGA-ATGTTG-----TATTGATGTG-A-AAA--ACTTAACG-TT-T----TGTTGAATATACTGTATTA---------T-------------TG-AATCAGTG-AAT--TATAATATAC-AGCT
gi|9 : cCGA-GTCCACTTTGAAA-TAGA-TGTAAA-TGTAGAGTTTGGATAAGT---TGTAATACTCAATCATTT-TTG----TTCGA-TTTTTTTATTT-TTTTA----ATT-CTGT----------------GA----AAT--C--G---CAT-TC-ATCA-T--C-CG-TTGTTT------TA-------ATGAT----ATAACCCCT-CCAGTGT------------TAC-AATATTT---GGA-C-C-----CCCACAAA--TGA-T-GCA-TTTT---GCAA-CATGGCTA----T--------GT----GAGGGCCT-AGCTTTGTT-A--TAAAT--------A-TTCCATTGT------TT-TATAATT----------TTCA-A-T-T-------T------TATT---T-C--TT---TTT----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-CCTTT-GTGAAAG-T-CA-----TGC-A-TAT-----T-AT-C---C-AA-AA------TGA---GG--TGCTT-----ATCAAC-TTG--TGA-----A-ATGAAGG-ACTA------GC---A--C--------A------T-A-------G-T--T------TTAT----ACC--CTCTG----ACTT------TCCGGGTCGAG-TGAATCT-A----ATA-TGA--GGCTGCG-A-C-AAATGTGTT-T------CCACTTT-----------GTGAACGCAGGC-AC---TAGT--TCTGAA-TTTT-A-T-AAT-AAATGGACAGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATGAA--ACCGATTG-TTGTAAA-TGTCGGAATATATT----A---------T-------------TG-AACAAGTG-AATGCTAT-ATATAC-AGCTt
Alignments
lowQualScore : 11111111111111111111111111111111
lowQualScore : 1 1 1 1 1111 333333333333 2 11 11 111 111 11111111111 1 1111 1111 111111 11111 111 1 222222 1 1 11 1 1 11 2 111 22 22 1 3333 1 11 55555555555 1 2222222 111111 222 2222 4444444444444 11 1 22 1 1 11 1 11 111 11111111111111111111111111111111 2222 1 1 1 11 1 1 1 222 11111 11 1 1 1 333333333333333 1 1 1 1 11111111 11 2222222222222222 111111 1111111 222222222222 11111 11 1111 22222 22222 1111 11111111111111 11111111111111 11111111 22222 1111 11111 1 2222222222222 1 11111 11111 2222222 2222222222222222222222222222222222222 111111 111111 1111111 1111111 22222222222 111111 111 1111 8888888888888888888888888888888888888
lowQualScore : 99 6 3 6 6 5 3 6 77 1 6 6 6 3 6 6 2 6 6 3 4444 6 888 3 6 7 6 6 2 99 99 2 99 3 444444444444 6 6 6 0 6 9999 44 5 33 000 5 000 0 44444444444 1 2222 5 2222 5 666666 5 44444 6 6 6 111 6 5 6 6 6 8 3 8 8 8 888888 3 0 0 3 33 0 0 9 0 88 8 0 999 0 55 55 0 2222 0 11 5 00000000000 1 8 5 3 9999999 6 3 777777 66 111 3 3 5555 7777777777777 7 88 3 00 3 3 7 33 0 33 2 3 444 99999999999999999999999999999999 2 6666 0 0 0 22 6 6 6 6 6 5 5 1 77 5 5 999 1 5 3 5 5 77 5 5 5 7 6 444 66666 55 66 6 77 2 5 77 5 1 5 1 111111111111111 2 5 99 5 77 0 888 0 4 5 2 0 3 777 00000000 1 4 9999 1 8 2 4 4 9999 44 9999999999999999 9999 66 66 777 4 4 4 55 4 4 111111 4444444 7 4 222222222222 4 777 4 4 11111 4 66 22 4 777 4 6666 00000 9999 22222 4 3 3 55 0000 3 3 999999 3 66666666666666 3 555 11111111111111 11111111 555 11111 3 0000 555 77 88888 44 3 3 3 3 3 3 88888 888 22222 3 3 555 0 3 6666666666666 55 0 55555 3 55 44444 3 3 2222222 666 55 6666666666666666666666666666666666666 7777 55 1 777777 111111 4 4444444 4 55 3 3 3 7 6666666 66666666666 555555 3 666 55 4 4 4 4 4 4 4 333 4 4 4 66 4 7777 2222222222222222222222222222222222222 8 5 0 0 5
lowQualScore : .. . . . . . . . .. . . . . . . . . . . . .... . ... . . . . . . .. .. . .. . ............ . . . . . .... .. . .. ... . ... . ........... . .... . .... . ...... . ..... . . . ... . . . . . . . . . . ...... . . . . .. . . . . .. . . ... . .. .. . .... . .. . ........... . . . . ....... . . ...... .. ... . . .... ............. . .. . .. . . . .. . .. . . ... ................................ . .... . . . .. . . . . . . . . .. . . ... . . . . . .. . . . . . ... ..... .. .. . .. . . .. . . . . ............... . . .. . .. . ... . . . . . . ... ........ . . .... . . . . . .... .. ................ .... .. .. ... . . . .. . . ...... ....... . . ............ . ... . . ..... . .. .. . ... . .... ..... .... ..... . . . .. .... . . ...... . .............. . ... .............. ........ ... ..... . .... ... .. ..... .. . . . . . . ..... ... ..... . . ... . . ............. .. . ..... . .. ..... . . ....... ... .. ..................................... .... .. . ...... ...... . ....... . .. . . . . ....... ........... ...... . ... .. . . . . . . . ... . . . .. . .... ..................................... . . . . .
lowQualScore : 22 7 5 7 7 5 3 7 77 5 7 7 7 3 7 7 0 7 7 5 2222 7 777 2 7 3 7 7 5 88 22 5 22 5 888888888888 7 7 7 0 7 3333 00 7 66 000 7 000 1 11111111111 4 1111 7 1111 7 444444 7 66666 7 7 7 777 7 0 7 7 7 0 8 0 0 0 888888 2 0 0 2 22 0 0 8 2 33 0 4 222 8 44 88 6 2222 6 22 0 55555555555 0 8 5 2 8888888 5 2 000000 88 555 2 2 3333 0000000000000 3 33 3 77 3 3 3 88 0 22 5 2 000 88888888888888888888888888888888 5 5555 0 0 0 55 7 7 7 7 7 0 0 4 99 7 7 111 4 7 0 7 7 99 0 7 7 3 7 777 77777 77 00 7 33 0 7 11 7 4 7 4 222222222222222 4 0 55 0 55 0 888 0 4 0 4 1 1 888 99999999 0 4 4444 1 9 2 4 4 4444 44 4444444444444444 4444 11 11 888 0 0 0 55 0 0 555555 4444444 7 4 888888888888 4 888 4 4 11111 4 11 99 4 888 4 5555 44444 4444 22222 4 6 6 00 8888 6 6 666666 3 00000000000000 3 888 44444444444444 44444444 888 77777 3 4444 888 99 33333 66 3 3 3 3 3 3 33333 333 99999 3 3 888 0 3 2222222222222 00 9 55555 6 00 11111 6 6 2222222 444 00 6666666666666666666666666666666666666 7777 55 1 000000 555555 0 1111111 0 55 6 6 6 3 0000000 44444444444 555555 6 444 55 0 4 4 4 4 4 4 333 4 4 4 11 4 2222 7777777777777777777777777777777777777 9 0 4 4 0
consensus : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCT-ATTATTTAGCAGTTGCTAGGCCAAGTTCTTTGGCAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTC------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGA-----------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
Reference ( family-3080 ) : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCT-ATTATTTAGCAGTTGCTAGGCCAAGTTCTTTGGCAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTC------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGA-----------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
gi|1 : CCTCCA--AAA--TAAAT-CCCA-CTTTCTT-GAACATTTGAAGGATCATCCCTG-AAG-TC--TGAGACTGTCTTTTCCCG-TCCCACTTCT-CTCT-GTCCTAAATGCAG-TGG-AT-AAAT-TCAGGGACTTCTTATTCCTGC----ATGT-T-GTCCT-AAAT-ATCCCAGTAAC-ATTA--GTGTGACTTT-GT--AG-AACTATTGTAGG-----------ACTCAAAATGTTCTTGC-AAATTCCCACTACCACTGCAGA-TGGT--TTT--ACAGGACATTTCTTTTG--TTTTT---CA-GGACT----ACT--GA----ATTGATAATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--AA-GTCTCAC-ACCATAA-TA---TATGCAG-ACCA-ATGCA-GG-ACATTAT-AT-GCTTTT-CCAGGA-CATGTTGATA------AAAGT-ATAGTGCAACAAAA--GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT---TATTTAG----------GC--AGTTCTTGGGCAGTTAA--GAGATTATTT---GGCAGTTTCT----AACAGTTC-AAGC------------TACAA-TATATTGTAAA---------ATT--TTAT------TTAAATTTTTGTAA---CTACATGTATAAGATTTTTTTTTTTTTTT--TTT---TTTTTTAT--TTACTAAGAAAGTAAATTTATGAA-TTAACTAACATACTTGCAAAGTTTTAAATTATTTAAATCAACTTGATTTATAATTTTTCAATCAGAAATGCAAATAGCAAATCAATACAAAATA-ATCA-TAATACCGTTGGACAGAACATATATCAATGTTATTGAAAGATATT----------------CGTGTCATTTTTA-GT-CGATCGGGTTCAAAAA-ACATCGG-GTGTGTTATGCGTCAATTCAAATAAAAACGA-CCGATAACTCTGT-G-CAAGCATGACGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGTTGG-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-CGATATACCAGATGTTATACTGAGTAAGATATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAATTG-TT-----GGA---CTGCATGGT-CGCC-T-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATA-TTCATTACTTGGA-CTT-GTTCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACG-ATATTTTTGAGATTA---------------ATGA-TTTTGT-GCAAGACGAG-GACCC---GGACGAAGG-CCTCGTCGGCGCGG-CTCC---TAC-ACCGAGGTCCATTTTGAAA-TGGAATGTAAAACGTAGAGTTGGGAT---C---G----TACTCAATTATTT-TTG----TTT-A-TTT-TA-ATTT-A-TTA----ATT-CTGT----------------GA----GAT--C--G---CA--TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATATATATAACCACT-CCGATGT------------TAA-AATATTT---GGACC-C-----CC-ACAAA--TG---TGCA-TTTT---GCAC-CATAGCCAT---TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---GAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------T-TT---C-T--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC----TTT-C-TTCTGTGGAAG-T-CA-----T-T-A-GAT-----T-AT-C---CAAA-A-------TGG---GA--TGTTT-----ATCAAC-TTG--TGA-----A-ATG-AGA-ACT-------GC---A--C---------------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTC-GGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------CAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-AT-AA--ACTTAACGTTTGT----TGTTGGA-----------A---------TATTCTTGTATTAATG-AAAAAGTG-AATGATATTAAATACGAGCT
gi|10 : CCTCCACAAAAA-TACTT-CCCAACTTTACTTGACTATCTTTAGGAT---TCCTGGAAGATCCATGAGACTCCTTTTTTCCG-TCCT-----T-CTCT-G--CTAAATGCAG-TGGGAT-AA-T-TCAGG-ACTTCTTATGTCTGC----AT-T-TTGTCCTTAAA--A--CCAGTAACCATTAA-GTGTGACTTTTGT--AGGAACT--TGAAGG------------CTCAAT-GGTCCT-GC-AAATTCCCACTACACCTGCAG--TGGTCATTTT-ACAGGAC-TTTCCTTTGGTTTTTT---CACGGACT---T-CTATGA----ATTGA-AATAA----AGAA----GTTA-TAAGTCCCGCCCATTCAATTATTCT-AA--AAAGTCCTAC-AC-ATGA-TA---TATTCAG-ACAAGATGTACGG-ACATTATGATTGCTTTTTC-AGGAACTTCTTGATA------A---TGAT-GTGCAACAAAAA-GTCTCTGGAACTTTCTGTACAGAGTTCTAACTCCAAGGAAAAAATGAACTGTT-ATCATTTAGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGC
gi|11 : TTTGTT-T--TAAAT----AAT-A-TATCACTAT------AT--AT---C----------CATA-A-T-TGTATTATT------TATT---TTC--TT---TTTACCACA-GAATGTG---TG---CCTAAGG-----CTC--T-TTTTC-TTC-ATGGA-G-T-CA------GC-ATGAT-----T-AT-TATTC-AATG-------TAA---AG--TG-TTTATCTACCGAC-TTG--TGATTTTCA-ATGAAGGGACTCTAGCAAGC---AGAC--------AAA----T-A-------G-TCAT------TTAT----ATCTCCTG------ACTT------TCCGGGTCGCGATGAATCCTA----ATA-TGA--AGCTGCG-A-C---ATGTGTT-TC-----AAACTTTTAAATAGAATCGT-A-----GGC-AC---TAGT--TGTGAA-TTGC-A-TAAAA-AAATGG-CGGAAC-TGT-AT-TGAATGGTGATTT-T----ATAAACTGCTT---G-TTGTGTAATATTGGA-----------ACTATTGTATT-------------TG-AACCAGTGTAACAATATAA---AC-AGCT
gi|12 : tgtttctaaattCCTCCA--AAAA-TAA-T-CCCA-CTTTTCTTGAATATTTGAAGGAT-ATCCCTGGAA--TCC-TGAGACTGCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGG----AAT-TCAGG-ACTACTTATTCCTGC----AT-T-A-GGAC--AAAT-A---CATT-AC--TCAA-ATGT----------------CC--TG------------------CAAA-T-TCC---C-AA--------TACCACTGCAGA-TG----TTTT-ACAGGAC-TCTTCTTTGT-TTTTT---CA-GGACT---TACT--G-----AT-GA-AAT-A----A-AA----GTTA-TAA-TCCC------TCAAATTTCTA-AA--A--GTCTCAA-AC-ATGA-TA---TATTCAAGA-CA-ATGCA-GG-ACATTAT-ATCGCTTTT-C-AGGA-CTTGTTGACACTTGATAAAGC-AT-GTGCAAC--AAA-GTCT-TGGA-CTTTCATTACAGTGTt
gi|13 : CTTCTTCTCTAGTCCTAA-TGCAGGTGGGATTAAGTATCAGG-ACT-CTTAATTCTGCTCAAGT-TAT-GTCCTTAAATTATCC-AGTAAC-ATTAAAGTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAC-TG-CCT-GCAAA-TTCCCACTACCACTGCAGA-TGCT--TTTTAACAGGAC-TTTCTTTTG--TTTTCTTACA-GGACT---TGCTC-GA----AT-GACAATAAGAATA-GA----GTTAGTAAGT-CC------TCATATTTCCT-AACCG--GTCTCACGAC-ATAATTAAATTATTCAGGA-CA-ATGGA-AGCACActa
gi|14 : -CCAAGGAAAAAATGAACTGTT-ATCATTTAGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGCAGTTGTGGTTTTTACTACTAC-TTGTAAATTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTC-ACTTAT-TAAGg
gi|15 : tCCTCCA--AAAA-TAAAT-CCCA-TTTTCTT-GAATATTTGAAGGAT-ATCCCTGGAAG-TCT-TAAGACTTCCTTTTCCAG-TCCCACTTTT-TTCT-TTCGTAA-TGCAG-TGGGAT-AA-T-TCAGG-AATTCTGATTCCTGC----AT-T-T-GTCCTTTAAT-ATCCCAGTAAC-ATTAA-GTGTCACTTT-GTCAAGGAACT--TTTAGGACAAATACATTACTCAAA-TGTCTT-GC-AATTTCCCACTACCACTGCAGA-TGAT--TTTT-ACActgagtctatcagttattatattttttaaaagcagttcaattcatttagtcctaataaatatctaactttgcaaactggacaagtgca
gi|16 : ------AT-TAT---T----------TTCA-A---T-------T------TATT---C-CT-TT---TT-----CA-GAGCGT----TC---TT--GGG-------C--T-GTT-C-TTC-ATAAAAG-T-CAGATACTAT-C-GATGTGAAT-AC-C---CAAA-A-------GCA---GG--TG-TT-----A--AA--TTGAATGAAG---A-ATAAAGA-A-TC------AC---A--CTCTATCAAA------T-GCATGCCCG-T--T------CCAT----GCC--CAC------CCTT------TCCATAT-GAG-TGTA-----------A-TGA--GACCGCA-A-C-AAATGTGTT-T------CAACTTT-----------GTAA------GC-AC---
gi|17 : ttattttcTTCTTCCAATATTCGTCGAGGCTAATAT--------TTGAA-CTG-G-TCTCCGGTTTC-CGGANN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGATTTTTGTCGCAGGACGGA-AACCCTC----CCATGGCC--AGCC--CGCGG-CTCCTCTTAC-AGTAA-GTCCATTTTG
gi|18 : ggtcgcc----TAATATGGTGT----GAGGGTCT-AGCTTTGTT-T--TATAT---AAAT-A-TACCATTGT------AT-TA----T----------TTCA-A-T-T-------T------TATT---T-C--TT---TTC----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-ATGGAAG-T-CA-----TGC-A-CAT-----T-AT-C---CAAA-A-------TGA---GG--TGTTT-----ATCAAC-TTG--TGA-----A-ATGAAGG-ACTA------GC---A--C--------ATACATGT-A-------G-T--T------TTAT----
gi|19 : gC-TTTCTTTTA--TTTTT---CA-GGACTAAGTACT--GA-----T-GA-AATAA----A-AAAAAAGTTA-CAAGTCCC------TCAAATTTCTA-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGA-CA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGGT
gi|2 : CCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGATTATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTA-C-ATTAA-GTGTGACTT--GT--AGGAACT--TGTAGC-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGAATGGT--TTT--ACAGGAC-TTTCTTT-G--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GT-A-TAAGTTCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAAAGTCT-TGGA-CTTTC-GTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT---TATTTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATT----GGCAGTTTT-CTAA--CAGTTCCAAGC-----------TTACAAATATATTGT----------GAATTTATT-TAA------AATTCT--GTAA---CTACATGTATAAGATTTTTTTTTTTTTTAAGTTT---TG----AT--TTACTAAGAAAGTA--TTTATGAAATTAACATACATATTTGCAAGGTT--AAATTATTTAAATCAACTTGATTTATAATTTT-CAACCAGAAATGCAA-TAGCAAATCAAT-CAA--TA-ATCAATAATACCGTTGGACAGA-C-TATATCAAT---------------T----------------CGTGTCATTTT---GT-CGATCGGGTTCAAAAA-GCATCGGTGTGTGT-GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA---GATT-----GGAGAGAGGCATGGTCCGCCTT-TTTGAGTTCTTCCGAGATTCGTGTAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTGAGTCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAGAGACCC-CGGGACGAAGGCCCTCGTCGTCGCGG--TCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAG-TTGGAT---C---T----TACTCAATTA-TT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT--TGT----------------GA----GAT--C--G---CAT-T--ATCC-T--C-TG--TGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AAAATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAA-A---TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-ACTACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGTGA-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTT--GGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A---------T--T------CTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGA---TTATTG-TG-G-ATAAA--A-TTAACG-TTGT----TGTTGG------------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCTca
gi|20 : cCTGCA-AAC-AAACATGTTCT------CAACTTT-----------GAGA-----GAG-AC-----AC--TCTAAA-TTGCGA-T-GAA-A--TGGATGGAAC-TGACAACTGAAG--T--TTA-TG-GCATGAA--ACT----G-TGAT----TGTTGGACTAAAT-----A---------T-------------TA-AACAAG
gi|21 : tgaCCATTGATT-CCGT-AAATTCACA---CCAGT--G-AACAAAGAATT------TGTG-AACAGCTGTTCTG---------AT-CCAGATGT--TA-TGAGTGCA-CATTTTATACTCAGTATT--AT-AAAC-TGGT
gi|22 : acaggcaagtttT-TC-ATTC-T--C-TG-TTGTTT------TA-------ATGAT----ATAACCCCA-TCGATGT------------TAA-AATATTT---GGA-CTC-----TC-ACAAA--T-G-TTGCA-TTTT---GCAC-CATAGCCA----T
gi|23 : CCTCCA--AAAAATAAATACCCG-CTTTCTT-GAATATTTGAAAGGA-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAGTTCCCACCT
gi|24 : -TTTCTTTTG--TTTTT---CA-GGACT---TACT--GATGACAT-AA-AA-AA----A-AA----GATA-AAAGTCCC------TCAAATTTCCTAAA--A--GTCTCA
gi|3 : -CCAAGGAAAAA-TGAACTGCTTATT--TTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATTT---GGCAGTTTT-CTAA--CAGTTCAAAGCAGTTGTGG-TTTTACTACTAC-TTGTAAACTGCTAAGAATTCAGTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTT-A--TTTGATTT----ACCGTTACT-----------TTCCTGAA-TTAAAATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGGAAATCAATACAA--TATATCA-TAATACCGTTGTACAGAAC-TGTATCAAT---------------TAGTTTTGAAAGATATTCGTGTCATTT--A-AT-CGATCGGGTTCAAAAAAGCATCGG-GTGTGTTATGCGTCAATTTAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGGATGGCGCGCGTTTT-AACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--GGA-CAAAGA-------------TAGCTGCTGTTCTTTAAA-GGATAT-CCAGATGTTCTA-TGAGTAAG-TATTT--TACTGTGTATTTCA---GAC-TGATGATTTTTTAAT-CTCAGCGA---GATTTGTTTGGAC---TGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATATTTCATTACTTGGA-CT--G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGA--GACCC-CGGGACGAAGGCCCTCGTCG-CGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTGGGA----C---T----TACTCAATTATTT-TTG----TTTGATTTTATA---TT-ATTTAATATATT-CTGTTTCATTGTTAAAACCCGA----AAT--CAGA---CATATCAATCC-T--C-TGATTGTTT------T
gi|3 : TTTGTTGA--AAAAT---TAATTA-TACCATTGTGTATTAAT-TATA--T----------TTCA-A-T-T-------TATCCTCTATTCAAT-CAATTTCATT-----CA-GAGGGTGATCTGTGCCC--AGG-----CTCGTT-CTT-A-CTT-GTGGAAGTT-CA-----TGTAA-GATGG---T-AT-C---C-AA-A-------Ttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggatttgttgaaaaattaattataccattgtgtattaattatatttcaatttatcctctattcaatcaatttcattcagagggtgatctgtgcccaggctcgttcttacttgtggaagttcatgtaagatggtatccaaataaatggatat
gi|4 : ccaaggaaaaatgaactgcttattttagcagttgctaggcagttctttggcagttaagagattatttggcagttttctaacagttcaaagcagttgtggttttactactacttgtaaactgctaagaattcagtataagcagttaattcttagcagtttctacatgtataagatttttttttttttatttgatttaccgttactttcctgaattaaaatacatatttgcaaagtttaaattatttaaatcaacttgatttataattttcaatcagaaatgcaataggaaatcaatacaatatatcataataccgttgtacagaactgtatcaattagttttgaaagatattcgtgtcatttaatcgatcgggttcaaaaaagcatcgggtgtgttatgcgtcaatttaaataaaaaggaccgataactctgtgcaaggatggcgcgcgttttaacagattcaggattgcgcctttgattgctgtaaaatgacagtctcagtggacaaagatagctgctgttctttaaaggatatccagatgttctatgagtaagtattttactgtgtatttcagactgatgattttttaatctcagcgagatttgtttggactgcatggtcgccttcttgagttcttccgagattcgtcgaagctaatatttcattacttggactgtcgccgtcttcgaagtattagatcaagcctcgacgaatatttttgagattaatgatttttgtgcaagacgagaccccgggacgaaggccctcgtcgcgcggctcctacaccgagtccattttgaaatggaatgtaaaatgtagagttgggacttactcaattatttttgtttgattttatattatttaatatattctgtttcattgttaaaacccgaaatcagacatatcaatcctctgattgtttttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggaAA--CA-ACCA---ATAGCATTGGACA--AC--------AT---------------T----------------T-TATCATTTT-AAGTACAANNNNNNNNNNNNN-NNNNNNN-NNNNN--GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTT--GACA-GATTCAGG-ATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA---GATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGTTATTAGATCA-GCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGG-CTCC---TACCACCGA-GTCCATTTTGAAAATGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TG--TTGCA-TTTT---GCAC-CATAGCCA----TAA-AT--TGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TTT----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---G---TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC---TT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-TAA-AAAAGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-------------A---------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCTaaatggatat
gi|5 : GCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGTTG-CAAGCATGGCGCGCGTTTTTGACA-GAT-CAGGGATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAA-GAATTA--CTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCATTAGACCTGATGATTTTTTAATTCTCAGCGAA--GATT-----GGAGAGAGGCATG--TCGCCTTTCTTGAGTTCTTCCGAGATTCGT-GAAGCTA-TATTTCATTACTTGGAACTTAG-TCGCCAGTCTTTCGAAGTTATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGGTCTCC---TACCACCG--GTC-ATTTGAAAA-TGGAATGTAAA-TGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTTTATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCCGT--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGGCTTGCATTTTT---GCAC-CATAGCCA----TAA-AT--TGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTG-------A--TAT---T----------TTCA-ATT-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGG-AG-T-CA-----TGT-A-GAT-----T-ATCC---C-AA-A-------TC----GG--TG-TT-----ATCAACTTTG--GGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A-------G-T--T------TTAT----AT---CTT------ACTT------TTTCGGTCGAG-TGAATC--A----ATT-TGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-ATT-AAACAAATGGACGGAAC-TGA-ATGTGGA---TTA-TG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-------------A---------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCT
gi|6 : GCGTCAATTCAAATAAAAAGGAACCGATAACTCTGT-GTCAAGCATGGCGCGCGTTTT-GACAAGATTCAGGGATTGCGCCTTTGAT-GCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATT-CAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCG-CGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGGTCTCC---TAC-ACCGC-GTCCATTTTGAAA-TGGAATGTAAA-TGTAGAGTT-GGAT---C---T----TACTCAATTATTT-TTG----TTTGACTTTATA-ATTT-ATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-AC-AA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAA-AT--TGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTGT------A--TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TC----GG--TG-TT-----ATCAAC-TTT--GGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A-------G----T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATC--A----ATATTGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--T-TGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGG------------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCTt
gi|7 : GAT---CCTAT----TACTCATTAATTTATTGATCATTT----TTATA-AT---GATTA----ATT-CCAT----------------GATGAAGATGTC--GGGCCAT-TC-ATCC-TACCGTG-TTGTTTATATAGTATTCTCACGTAATTCATAGAGCAATTTCCGATGTGTAGCTATTGCACAAGAATCTTTTACGGA-C-CACGCCCT-ACAAAAATAG-TTGCA-TTTTTATGCAAACATAGCCAAGATTAATATGTTGTATTTTA-----TTAACTTTGTT-AATTAGATATATAA--A-TACCATTGA------ATATAT---TGTAACTTAGATTCATA-TGT-------T------TATT---TGC--TT---TTA----CAAGAGTGT----TG---CCG-AGGGCGTGCAT--T-TTT-G-TCA-GTGGAAG-TGCA-----TGT-ATGAT-----TTAT-C---T-GA-AAATAAGATTGT--GGCATG-TTTTA--ATCAAC-TTG--CTA-----ATATGAAG--ACCG------GCAAAA--C--------A------TAA-------G-T--TGTGAGGCTATTTTAATC--CATGAGTAAACTTGATAAATTCGGGTCGAG-CTGATCA-ATCTTAAA-AGAAGAGCTGGGAA-CAAAAAGTGTTGTATACAGAAGCTTTGATGG------GTGA-----TGCTACACTTAGTTATCTGAA-CTGt
gi|8 : TTGATATTA---------------ATTATTT--GT-GCAAGACGA---ACCC-CG--ACGAAGGCCCTCGTCGCCGC---TCCC---TAC-ACCGA-ATCCATTTTGAAA-TG-AATGTAA--TG-AGA--TTGGAT---C---T----TACTCAAT-ATTT-TTG----T--GA-TTTTTA-ATTT-ATTTA----ATC----T----------------GA----GAT--C--G---C---TC-ATCC-T--C-TG-TT-TTT------TA-------ATGATATATATAACCACT-CCGATG-------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TG---TGCA-TTTG---CCAC-CATA-CCAT---TAATAT--TGT----TA-----T-AAC--TGTT-A--TAAAT---TA---A-TACCATTGT------AT-TA----T----------TTCA-A---T-------T------TATT--------CT---TT-----CA-AGGTG-----------C--AGG-----CTA--TCTTT-C-T---GTCGA---T-CA-----T-----GAA-----T-AT-C---C-AA-A-------ATGCATGT--TA-TT-----ATCAAC-TTG--T-A-----A-ATGAAGA-ACT-------GC---A--C--------A------T-A-------GATA-T------TTAT----ATC--C-T------AC--------TCCGA--CGA---GATTCA-A----ATA--AA--AGCTGC--A-C-AAATG-GTT-T------CAACTTT------------TGA------GC-AC---TAG---TCTGAATTTGC-A-T-AAA-AAATGGACGGAACTTGA-ATGTTG-----TATTGATGTG-A-AAA--ACTTAACG-TT-T----TGTTGAATATACTGTATTA---------T-------------TG-AATCAGTG-AAT--TATAATATAC-AGCT
gi|9 : cCGA-GTCCACTTTGAAA-TAGA-TGTAAA-TGTAGAGTTTGGATAAGT---TGTAATACTCAATCATTT-TTG----TTCGA-TTTTTTTATTT-TTTTA----ATT-CTGT----------------GA----AAT--C--G---CAT-TC-ATCA-T--C-CG-TTGTTT------TA-------ATGAT----ATAACCCCT-CCAGTGT------------TAC-AATATTT---GGA-C-C-----CCCACAAA--TGA-T-GCA-TTTT---GCAA-CATGGCTA----T--------GT----GAGGGCCT-AGCTTTGTT-A--TAAAT--------A-TTCCATTGT------TT-TATAATT----------TTCA-A-T-T-------T------TATT---T-C--TT---TTT----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-CCTTT-GTGAAAG-T-CA-----TGC-A-TAT-----T-AT-C---C-AA-AA------TGA---GG--TGCTT-----ATCAAC-TTG--TGA-----A-ATGAAGG-ACTA------GC---A--C--------A------T-A-------G-T--T------TTAT----ACC--CTCTG----ACTT------TCCGGGTCGAG-TGAATCT-A----ATA-TGA--GGCTGCG-A-C-AAATGTGTT-T------CCACTTT-----------GTGAACGCAGGC-AC---TAGT--TCTGAA-TTTT-A-T-AAT-AAATGGACAGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATGAA--ACCGATTG-TTGTAAA-TGTCGGAATATATT----A---------T-------------TG-AACAAGTG-AATGCTAT-ATATAC-AGCTt
Alignments
lowQualScore : 11111111111111111111111111111111
lowQualScore : 1 1 1 1 1111 333333333333 2 11 11 111 111 11111111111 1 1111 1111 111111 11111 111 1 222222 1 1 11 1 1 11 2 111 22 22 1 3333 1 11 55555555555 1 2222222 111111 222 2222 4444444444444 11 1 22 1 1 11 1 11 111 11111111111111111111111111111111 2222 1 1 1 11 1 1 1 222 11111 11 1 1 1 333333333333333 1 1 1 1 11111111 11 2222222222222222 111111 1111111 222222222222 11111 11 1111 22222 22222 1111 11111111111111 11111111111111 11111111 22222 1111 11111 1 2222222222222 1 11111 11111 2222222 2222222222222222222222222222222222222 111111 111111 1111111 1111111 22222222222 111111 111 1111 8888888888888888888888888888888888888
lowQualScore : 99 6 3 6 6 5 3 6 77 1 6 6 6 3 6 6 2 6 6 3 4444 6 888 3 6 7 6 6 2 99 99 2 99 3 444444444444 6 6 6 0 6 9999 44 5 33 000 5 000 0 44444444444 1 2222 5 2222 5 666666 5 44444 6 6 6 111 6 5 6 6 6 8 3 8 8 8 888888 3 0 0 3 33 0 0 9 0 88 8 0 999 0 55 55 0 2222 0 11 5 00000000000 1 8 5 3 9999999 6 3 777777 66 111 3 3 5555 7777777777777 7 88 3 00 3 3 7 33 0 33 2 3 444 99999999999999999999999999999999 2 6666 0 0 0 22 6 6 6 6 6 5 5 1 77 5 5 999 1 5 3 5 5 77 5 5 5 7 6 444 66666 55 66 6 77 2 5 77 5 1 5 1 111111111111111 2 5 99 5 77 0 888 0 4 5 2 0 3 777 00000000 1 4 9999 1 8 2 4 4 9999 44 9999999999999999 9999 66 66 777 4 4 4 55 4 4 111111 4444444 7 4 222222222222 4 777 4 4 11111 4 66 22 4 777 4 6666 00000 9999 22222 4 3 3 55 0000 3 3 999999 3 66666666666666 3 555 11111111111111 11111111 555 11111 3 0000 555 77 88888 44 3 3 3 3 3 3 88888 888 22222 3 3 555 0 3 6666666666666 55 0 55555 3 55 44444 3 3 2222222 666 55 6666666666666666666666666666666666666 7777 55 1 777777 111111 4 4444444 4 55 3 3 3 7 6666666 66666666666 555555 3 666 55 4 4 4 4 4 4 4 333 4 4 4 66 4 7777 2222222222222222222222222222222222222 8 5 0 0 5
lowQualScore : .. . . . . . . . .. . . . . . . . . . . . .... . ... . . . . . . .. .. . .. . ............ . . . . . .... .. . .. ... . ... . ........... . .... . .... . ...... . ..... . . . ... . . . . . . . . . . ...... . . . . .. . . . . .. . . ... . .. .. . .... . .. . ........... . . . . ....... . . ...... .. ... . . .... ............. . .. . .. . . . .. . .. . . ... ................................ . .... . . . .. . . . . . . . . .. . . ... . . . . . .. . . . . . ... ..... .. .. . .. . . .. . . . . ............... . . .. . .. . ... . . . . . . ... ........ . . .... . . . . . .... .. ................ .... .. .. ... . . . .. . . ...... ....... . . ............ . ... . . ..... . .. .. . ... . .... ..... .... ..... . . . .. .... . . ...... . .............. . ... .............. ........ ... ..... . .... ... .. ..... .. . . . . . . ..... ... ..... . . ... . . ............. .. . ..... . .. ..... . . ....... ... .. ..................................... .... .. . ...... ...... . ....... . .. . . . . ....... ........... ...... . ... .. . . . . . . . ... . . . .. . .... ..................................... . . . . .
lowQualScore : 22 7 5 7 7 5 3 7 77 5 7 7 7 3 7 7 0 7 7 5 2222 7 777 2 7 3 7 7 5 88 22 5 22 5 888888888888 7 7 7 0 7 3333 00 7 66 000 7 000 1 11111111111 4 1111 7 1111 7 444444 7 66666 7 7 7 777 7 0 7 7 7 0 8 0 0 0 888888 2 0 0 2 22 0 0 8 2 33 0 4 222 8 44 88 6 2222 6 22 0 55555555555 0 8 5 2 8888888 5 2 000000 88 555 2 2 3333 0000000000000 3 33 3 77 3 3 3 88 0 22 5 2 000 88888888888888888888888888888888 5 5555 0 0 0 55 7 7 7 7 7 0 0 4 99 7 7 111 4 7 0 7 7 99 0 7 7 3 7 777 77777 77 00 7 33 0 7 11 7 4 7 4 222222222222222 4 0 55 0 55 0 888 0 4 0 4 1 1 888 99999999 0 4 4444 1 9 2 4 4 4444 44 4444444444444444 4444 11 11 888 0 0 0 55 0 0 555555 4444444 7 4 888888888888 4 888 4 4 11111 4 11 99 4 888 4 5555 44444 4444 22222 4 6 6 00 8888 6 6 666666 3 00000000000000 3 888 44444444444444 44444444 888 77777 3 4444 888 99 33333 66 3 3 3 3 3 3 33333 333 99999 3 3 888 0 3 2222222222222 00 9 55555 6 00 11111 6 6 2222222 444 00 6666666666666666666666666666666666666 7777 55 1 000000 555555 0 1111111 0 55 6 6 6 3 0000000 44444444444 555555 6 444 55 0 4 4 4 4 4 4 333 4 4 4 11 4 2222 7777777777777777777777777777777777777 9 0 4 4 0
consensus : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCT-ATTATTTAGCAGTTGCTAGGCCAAGTTCTTTGGCAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTC------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGA-----------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
Reference ( family-3080 ) : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCT-ATTATTTAGCAGTTGCTAGGCCAAGTTCTTTGGCAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTC------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGA-----------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
gi|1 : CCTCCA--AAA--TAAAT-CCCA-CTTTCTT-GAACATTTGAAGGATCATCCCTG-AAG-TC--TGAGACTGTCTTTTCCCG-TCCCACTTCT-CTCT-GTCCTAAATGCAG-TGG-AT-AAAT-TCAGGGACTTCTTATTCCTGC----ATGT-T-GTCCT-AAAT-ATCCCAGTAAC-ATTA--GTGTGACTTT-GT--AG-AACTATTGTAGG-----------ACTCAAAATGTTCTTGC-AAATTCCCACTACCACTGCAGA-TGGT--TTT--ACAGGACATTTCTTTTG--TTTTT---CA-GGACT----ACT--GA----ATTGATAATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--AA-GTCTCAC-ACCATAA-TA---TATGCAG-ACCA-ATGCA-GG-ACATTAT-AT-GCTTTT-CCAGGA-CATGTTGATA------AAAGT-ATAGTGCAACAAAA--GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT---TATTTAG----------GC--AGTTCTTGGGCAGTTAA--GAGATTATTT---GGCAGTTTCT----AACAGTTC-AAGC------------TACAA-TATATTGTAAA---------ATT--TTAT------TTAAATTTTTGTAA---CTACATGTATAAGATTTTTTTTTTTTTTT--TTT---TTTTTTAT--TTACTAAGAAAGTAAATTTATGAA-TTAACTAACATACTTGCAAAGTTTTAAATTATTTAAATCAACTTGATTTATAATTTTTCAATCAGAAATGCAAATAGCAAATCAATACAAAATA-ATCA-TAATACCGTTGGACAGAACATATATCAATGTTATTGAAAGATATT----------------CGTGTCATTTTTA-GT-CGATCGGGTTCAAAAA-ACATCGG-GTGTGTTATGCGTCAATTCAAATAAAAACGA-CCGATAACTCTGT-G-CAAGCATGACGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGTTGG-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-CGATATACCAGATGTTATACTGAGTAAGATATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAATTG-TT-----GGA---CTGCATGGT-CGCC-T-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATA-TTCATTACTTGGA-CTT-GTTCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACG-ATATTTTTGAGATTA---------------ATGA-TTTTGT-GCAAGACGAG-GACCC---GGACGAAGG-CCTCGTCGGCGCGG-CTCC---TAC-ACCGAGGTCCATTTTGAAA-TGGAATGTAAAACGTAGAGTTGGGAT---C---G----TACTCAATTATTT-TTG----TTT-A-TTT-TA-ATTT-A-TTA----ATT-CTGT----------------GA----GAT--C--G---CA--TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATATATATAACCACT-CCGATGT------------TAA-AATATTT---GGACC-C-----CC-ACAAA--TG---TGCA-TTTT---GCAC-CATAGCCAT---TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---GAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------T-TT---C-T--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC----TTT-C-TTCTGTGGAAG-T-CA-----T-T-A-GAT-----T-AT-C---CAAA-A-------TGG---GA--TGTTT-----ATCAAC-TTG--TGA-----A-ATG-AGA-ACT-------GC---A--C---------------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTC-GGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------CAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-AT-AA--ACTTAACGTTTGT----TGTTGGA-----------A---------TATTCTTGTATTAATG-AAAAAGTG-AATGATATTAAATACGAGCT
gi|10 : CCTCCACAAAAA-TACTT-CCCAACTTTACTTGACTATCTTTAGGAT---TCCTGGAAGATCCATGAGACTCCTTTTTTCCG-TCCT-----T-CTCT-G--CTAAATGCAG-TGGGAT-AA-T-TCAGG-ACTTCTTATGTCTGC----AT-T-TTGTCCTTAAA--A--CCAGTAACCATTAA-GTGTGACTTTTGT--AGGAACT--TGAAGG------------CTCAAT-GGTCCT-GC-AAATTCCCACTACACCTGCAG--TGGTCATTTT-ACAGGAC-TTTCCTTTGGTTTTTT---CACGGACT---T-CTATGA----ATTGA-AATAA----AGAA----GTTA-TAAGTCCCGCCCATTCAATTATTCT-AA--AAAGTCCTAC-AC-ATGA-TA---TATTCAG-ACAAGATGTACGG-ACATTATGATTGCTTTTTC-AGGAACTTCTTGATA------A---TGAT-GTGCAACAAAAA-GTCTCTGGAACTTTCTGTACAGAGTTCTAACTCCAAGGAAAAAATGAACTGTT-ATCATTTAGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGC
gi|11 : TTTGTT-T--TAAAT----AAT-A-TATCACTAT------AT--AT---C----------CATA-A-T-TGTATTATT------TATT---TTC--TT---TTTACCACA-GAATGTG---TG---CCTAAGG-----CTC--T-TTTTC-TTC-ATGGA-G-T-CA------GC-ATGAT-----T-AT-TATTC-AATG-------TAA---AG--TG-TTTATCTACCGAC-TTG--TGATTTTCA-ATGAAGGGACTCTAGCAAGC---AGAC--------AAA----T-A-------G-TCAT------TTAT----ATCTCCTG------ACTT------TCCGGGTCGCGATGAATCCTA----ATA-TGA--AGCTGCG-A-C---ATGTGTT-TC-----AAACTTTTAAATAGAATCGT-A-----GGC-AC---TAGT--TGTGAA-TTGC-A-TAAAA-AAATGG-CGGAAC-TGT-AT-TGAATGGTGATTT-T----ATAAACTGCTT---G-TTGTGTAATATTGGA-----------ACTATTGTATT-------------TG-AACCAGTGTAACAATATAA---AC-AGCT
gi|12 : tgtttctaaattCCTCCA--AAAA-TAA-T-CCCA-CTTTTCTTGAATATTTGAAGGAT-ATCCCTGGAA--TCC-TGAGACTGCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGG----AAT-TCAGG-ACTACTTATTCCTGC----AT-T-A-GGAC--AAAT-A---CATT-AC--TCAA-ATGT----------------CC--TG------------------CAAA-T-TCC---C-AA--------TACCACTGCAGA-TG----TTTT-ACAGGAC-TCTTCTTTGT-TTTTT---CA-GGACT---TACT--G-----AT-GA-AAT-A----A-AA----GTTA-TAA-TCCC------TCAAATTTCTA-AA--A--GTCTCAA-AC-ATGA-TA---TATTCAAGA-CA-ATGCA-GG-ACATTAT-ATCGCTTTT-C-AGGA-CTTGTTGACACTTGATAAAGC-AT-GTGCAAC--AAA-GTCT-TGGA-CTTTCATTACAGTGTt
gi|13 : CTTCTTCTCTAGTCCTAA-TGCAGGTGGGATTAAGTATCAGG-ACT-CTTAATTCTGCTCAAGT-TAT-GTCCTTAAATTATCC-AGTAAC-ATTAAAGTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAC-TG-CCT-GCAAA-TTCCCACTACCACTGCAGA-TGCT--TTTTAACAGGAC-TTTCTTTTG--TTTTCTTACA-GGACT---TGCTC-GA----AT-GACAATAAGAATA-GA----GTTAGTAAGT-CC------TCATATTTCCT-AACCG--GTCTCACGAC-ATAATTAAATTATTCAGGA-CA-ATGGA-AGCACActa
gi|14 : -CCAAGGAAAAAATGAACTGTT-ATCATTTAGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAG-TTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGCAGTTGTGGTTTTTACTACTAC-TTGTAAATTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTC-ACTTAT-TAAGg
gi|15 : tCCTCCA--AAAA-TAAAT-CCCA-TTTTCTT-GAATATTTGAAGGAT-ATCCCTGGAAG-TCT-TAAGACTTCCTTTTCCAG-TCCCACTTTT-TTCT-TTCGTAA-TGCAG-TGGGAT-AA-T-TCAGG-AATTCTGATTCCTGC----AT-T-T-GTCCTTTAAT-ATCCCAGTAAC-ATTAA-GTGTCACTTT-GTCAAGGAACT--TTTAGGACAAATACATTACTCAAA-TGTCTT-GC-AATTTCCCACTACCACTGCAGA-TGAT--TTTT-ACActgagtctatcagttattatattttttaaaagcagttcaattcatttagtcctaataaatatctaactttgcaaactggacaagtgca
gi|16 : ------AT-TAT---T----------TTCA-A---T-------T------TATT---C-CT-TT---TT-----CA-GAGCGT----TC---TT--GGG-------C--T-GTT-C-TTC-ATAAAAG-T-CAGATACTAT-C-GATGTGAAT-AC-C---CAAA-A-------GCA---GG--TG-TT-----A--AA--TTGAATGAAG---A-ATAAAGA-A-TC------AC---A--CTCTATCAAA------T-GCATGCCCG-T--T------CCAT----GCC--CAC------CCTT------TCCATAT-GAG-TGTA-----------A-TGA--GACCGCA-A-C-AAATGTGTT-T------CAACTTT-----------GTAA------GC-AC---
gi|17 : ttattttcTTCTTCCAATATTCGTCGAGGCTAATAT--------TTGAA-CTG-G-TCTCCGGTTTC-CGGANN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGATTTTTGTCGCAGGACGGA-AACCCTC----CCATGGCC--AGCC--CGCGG-CTCCTCTTAC-AGTAA-GTCCATTTTG
gi|18 : ggtcgcc----TAATATGGTGT----GAGGGTCT-AGCTTTGTT-T--TATAT---AAAT-A-TACCATTGT------AT-TA----T----------TTCA-A-T-T-------T------TATT---T-C--TT---TTC----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-ATGGAAG-T-CA-----TGC-A-CAT-----T-AT-C---CAAA-A-------TGA---GG--TGTTT-----ATCAAC-TTG--TGA-----A-ATGAAGG-ACTA------GC---A--C--------ATACATGT-A-------G-T--T------TTAT----
gi|19 : gC-TTTCTTTTA--TTTTT---CA-GGACTAAGTACT--GA-----T-GA-AATAA----A-AAAAAAGTTA-CAAGTCCC------TCAAATTTCTA-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGA-CA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGGT
gi|2 : CCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGATTATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTA-C-ATTAA-GTGTGACTT--GT--AGGAACT--TGTAGC-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGAATGGT--TTT--ACAGGAC-TTTCTTT-G--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GT-A-TAAGTTCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAAAGTCT-TGGA-CTTTC-GTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT---TATTTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATT----GGCAGTTTT-CTAA--CAGTTCCAAGC-----------TTACAAATATATTGT----------GAATTTATT-TAA------AATTCT--GTAA---CTACATGTATAAGATTTTTTTTTTTTTTAAGTTT---TG----AT--TTACTAAGAAAGTA--TTTATGAAATTAACATACATATTTGCAAGGTT--AAATTATTTAAATCAACTTGATTTATAATTTT-CAACCAGAAATGCAA-TAGCAAATCAAT-CAA--TA-ATCAATAATACCGTTGGACAGA-C-TATATCAAT---------------T----------------CGTGTCATTTT---GT-CGATCGGGTTCAAAAA-GCATCGGTGTGTGT-GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA---GATT-----GGAGAGAGGCATGGTCCGCCTT-TTTGAGTTCTTCCGAGATTCGTGTAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTGAGTCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAGAGACCC-CGGGACGAAGGCCCTCGTCGTCGCGG--TCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAG-TTGGAT---C---T----TACTCAATTA-TT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT--TGT----------------GA----GAT--C--G---CAT-T--ATCC-T--C-TG--TGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AAAATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAA-A---TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-ACTACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGTGA-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTT--GGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A---------T--T------CTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGA---TTATTG-TG-G-ATAAA--A-TTAACG-TTGT----TGTTGG------------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCTca
gi|20 : cCTGCA-AAC-AAACATGTTCT------CAACTTT-----------GAGA-----GAG-AC-----AC--TCTAAA-TTGCGA-T-GAA-A--TGGATGGAAC-TGACAACTGAAG--T--TTA-TG-GCATGAA--ACT----G-TGAT----TGTTGGACTAAAT-----A---------T-------------TA-AACAAG
gi|21 : tgaCCATTGATT-CCGT-AAATTCACA---CCAGT--G-AACAAAGAATT------TGTG-AACAGCTGTTCTG---------AT-CCAGATGT--TA-TGAGTGCA-CATTTTATACTCAGTATT--AT-AAAC-TGGT
gi|22 : acaggcaagtttT-TC-ATTC-T--C-TG-TTGTTT------TA-------ATGAT----ATAACCCCA-TCGATGT------------TAA-AATATTT---GGA-CTC-----TC-ACAAA--T-G-TTGCA-TTTT---GCAC-CATAGCCA----T
gi|23 : CCTCCA--AAAAATAAATACCCG-CTTTCTT-GAATATTTGAAAGGA-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAGTTCCCACCT
gi|24 : -TTTCTTTTG--TTTTT---CA-GGACT---TACT--GATGACAT-AA-AA-AA----A-AA----GATA-AAAGTCCC------TCAAATTTCCTAAA--A--GTCTCA
gi|3 : -CCAAGGAAAAA-TGAACTGCTTATT--TTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATTT---GGCAGTTTT-CTAA--CAGTTCAAAGCAGTTGTGG-TTTTACTACTAC-TTGTAAACTGCTAAGAATTCAGTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTT-A--TTTGATTT----ACCGTTACT-----------TTCCTGAA-TTAAAATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGGAAATCAATACAA--TATATCA-TAATACCGTTGTACAGAAC-TGTATCAAT---------------TAGTTTTGAAAGATATTCGTGTCATTT--A-AT-CGATCGGGTTCAAAAAAGCATCGG-GTGTGTTATGCGTCAATTTAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGGATGGCGCGCGTTTT-AACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--GGA-CAAAGA-------------TAGCTGCTGTTCTTTAAA-GGATAT-CCAGATGTTCTA-TGAGTAAG-TATTT--TACTGTGTATTTCA---GAC-TGATGATTTTTTAAT-CTCAGCGA---GATTTGTTTGGAC---TGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATATTTCATTACTTGGA-CT--G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGA--GACCC-CGGGACGAAGGCCCTCGTCG-CGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTGGGA----C---T----TACTCAATTATTT-TTG----TTTGATTTTATA---TT-ATTTAATATATT-CTGTTTCATTGTTAAAACCCGA----AAT--CAGA---CATATCAATCC-T--C-TGATTGTTT------T
gi|3 : TTTGTTGA--AAAAT---TAATTA-TACCATTGTGTATTAAT-TATA--T----------TTCA-A-T-T-------TATCCTCTATTCAAT-CAATTTCATT-----CA-GAGGGTGATCTGTGCCC--AGG-----CTCGTT-CTT-A-CTT-GTGGAAGTT-CA-----TGTAA-GATGG---T-AT-C---C-AA-A-------Ttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggatttgttgaaaaattaattataccattgtgtattaattatatttcaatttatcctctattcaatcaatttcattcagagggtgatctgtgcccaggctcgttcttacttgtggaagttcatgtaagatggtatccaaataaatggatat
gi|4 : ccaaggaaaaatgaactgcttattttagcagttgctaggcagttctttggcagttaagagattatttggcagttttctaacagttcaaagcagttgtggttttactactacttgtaaactgctaagaattcagtataagcagttaattcttagcagtttctacatgtataagatttttttttttttatttgatttaccgttactttcctgaattaaaatacatatttgcaaagtttaaattatttaaatcaacttgatttataattttcaatcagaaatgcaataggaaatcaatacaatatatcataataccgttgtacagaactgtatcaattagttttgaaagatattcgtgtcatttaatcgatcgggttcaaaaaagcatcgggtgtgttatgcgtcaatttaaataaaaaggaccgataactctgtgcaaggatggcgcgcgttttaacagattcaggattgcgcctttgattgctgtaaaatgacagtctcagtggacaaagatagctgctgttctttaaaggatatccagatgttctatgagtaagtattttactgtgtatttcagactgatgattttttaatctcagcgagatttgtttggactgcatggtcgccttcttgagttcttccgagattcgtcgaagctaatatttcattacttggactgtcgccgtcttcgaagtattagatcaagcctcgacgaatatttttgagattaatgatttttgtgcaagacgagaccccgggacgaaggccctcgtcgcgcggctcctacaccgagtccattttgaaatggaatgtaaaatgtagagttgggacttactcaattatttttgtttgattttatattatttaatatattctgtttcattgttaaaacccgaaatcagacatatcaatcctctgattgtttttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggaAA--CA-ACCA---ATAGCATTGGACA--AC--------AT---------------T----------------T-TATCATTTT-AAGTACAANNNNNNNNNNNNN-NNNNNNN-NNNNN--GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTT--GACA-GATTCAGG-ATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA---GATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGTTATTAGATCA-GCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGG-CTCC---TACCACCGA-GTCCATTTTGAAAATGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TG--TTGCA-TTTT---GCAC-CATAGCCA----TAA-AT--TGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TTT----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---G---TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC---TT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-TAA-AAAAGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-------------A---------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCTaaatggatat
gi|5 : GCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGTTG-CAAGCATGGCGCGCGTTTTTGACA-GAT-CAGGGATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAA-GAATTA--CTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCATTAGACCTGATGATTTTTTAATTCTCAGCGAA--GATT-----GGAGAGAGGCATG--TCGCCTTTCTTGAGTTCTTCCGAGATTCGT-GAAGCTA-TATTTCATTACTTGGAACTTAG-TCGCCAGTCTTTCGAAGTTATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGGTCTCC---TACCACCG--GTC-ATTTGAAAA-TGGAATGTAAA-TGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTTTATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCCGT--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGGCTTGCATTTTT---GCAC-CATAGCCA----TAA-AT--TGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTG-------A--TAT---T----------TTCA-ATT-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGG-AG-T-CA-----TGT-A-GAT-----T-ATCC---C-AA-A-------TC----GG--TG-TT-----ATCAACTTTG--GGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A-------G-T--T------TTAT----AT---CTT------ACTT------TTTCGGTCGAG-TGAATC--A----ATT-TGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-ATT-AAACAAATGGACGGAAC-TGA-ATGTGGA---TTA-TG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-------------A---------T-------------TGAAACAAGTG-AATGATATAATATAC-AGCT
gi|6 : GCGTCAATTCAAATAAAAAGGAACCGATAACTCTGT-GTCAAGCATGGCGCGCGTTTT-GACAAGATTCAGGGATTGCGCCTTTGAT-GCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATT-CAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCG-CGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGGTCTCC---TAC-ACCGC-GTCCATTTTGAAA-TGGAATGTAAA-TGTAGAGTT-GGAT---C---T----TACTCAATTATTT-TTG----TTTGACTTTATA-ATTT-ATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-AC-AA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAA-AT--TGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTGT------A--TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TC----GG--TG-TT-----ATCAAC-TTT--GGA-----A-ATGAAGA-ACTT------GC---A--C--------A------T-A-------G----T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATC--A----ATATTGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--T-TGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGG------------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCTt
gi|7 : GAT---CCTAT----TACTCATTAATTTATTGATCATTT----TTATA-AT---GATTA----ATT-CCAT----------------GATGAAGATGTC--GGGCCAT-TC-ATCC-TACCGTG-TTGTTTATATAGTATTCTCACGTAATTCATAGAGCAATTTCCGATGTGTAGCTATTGCACAAGAATCTTTTACGGA-C-CACGCCCT-ACAAAAATAG-TTGCA-TTTTTATGCAAACATAGCCAAGATTAATATGTTGTATTTTA-----TTAACTTTGTT-AATTAGATATATAA--A-TACCATTGA------ATATAT---TGTAACTTAGATTCATA-TGT-------T------TATT---TGC--TT---TTA----CAAGAGTGT----TG---CCG-AGGGCGTGCAT--T-TTT-G-TCA-GTGGAAG-TGCA-----TGT-ATGAT-----TTAT-C---T-GA-AAATAAGATTGT--GGCATG-TTTTA--ATCAAC-TTG--CTA-----ATATGAAG--ACCG------GCAAAA--C--------A------TAA-------G-T--TGTGAGGCTATTTTAATC--CATGAGTAAACTTGATAAATTCGGGTCGAG-CTGATCA-ATCTTAAA-AGAAGAGCTGGGAA-CAAAAAGTGTTGTATACAGAAGCTTTGATGG------GTGA-----TGCTACACTTAGTTATCTGAA-CTGt
gi|8 : TTGATATTA---------------ATTATTT--GT-GCAAGACGA---ACCC-CG--ACGAAGGCCCTCGTCGCCGC---TCCC---TAC-ACCGA-ATCCATTTTGAAA-TG-AATGTAA--TG-AGA--TTGGAT---C---T----TACTCAAT-ATTT-TTG----T--GA-TTTTTA-ATTT-ATTTA----ATC----T----------------GA----GAT--C--G---C---TC-ATCC-T--C-TG-TT-TTT------TA-------ATGATATATATAACCACT-CCGATG-------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TG---TGCA-TTTG---CCAC-CATA-CCAT---TAATAT--TGT----TA-----T-AAC--TGTT-A--TAAAT---TA---A-TACCATTGT------AT-TA----T----------TTCA-A---T-------T------TATT--------CT---TT-----CA-AGGTG-----------C--AGG-----CTA--TCTTT-C-T---GTCGA---T-CA-----T-----GAA-----T-AT-C---C-AA-A-------ATGCATGT--TA-TT-----ATCAAC-TTG--T-A-----A-ATGAAGA-ACT-------GC---A--C--------A------T-A-------GATA-T------TTAT----ATC--C-T------AC--------TCCGA--CGA---GATTCA-A----ATA--AA--AGCTGC--A-C-AAATG-GTT-T------CAACTTT------------TGA------GC-AC---TAG---TCTGAATTTGC-A-T-AAA-AAATGGACGGAACTTGA-ATGTTG-----TATTGATGTG-A-AAA--ACTTAACG-TT-T----TGTTGAATATACTGTATTA---------T-------------TG-AATCAGTG-AAT--TATAATATAC-AGCT
gi|9 : cCGA-GTCCACTTTGAAA-TAGA-TGTAAA-TGTAGAGTTTGGATAAGT---TGTAATACTCAATCATTT-TTG----TTCGA-TTTTTTTATTT-TTTTA----ATT-CTGT----------------GA----AAT--C--G---CAT-TC-ATCA-T--C-CG-TTGTTT------TA-------ATGAT----ATAACCCCT-CCAGTGT------------TAC-AATATTT---GGA-C-C-----CCCACAAA--TGA-T-GCA-TTTT---GCAA-CATGGCTA----T--------GT----GAGGGCCT-AGCTTTGTT-A--TAAAT--------A-TTCCATTGT------TT-TATAATT----------TTCA-A-T-T-------T------TATT---T-C--TT---TTT----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-CCTTT-GTGAAAG-T-CA-----TGC-A-TAT-----T-AT-C---C-AA-AA------TGA---GG--TGCTT-----ATCAAC-TTG--TGA-----A-ATGAAGG-ACTA------GC---A--C--------A------T-A-------G-T--T------TTAT----ACC--CTCTG----ACTT------TCCGGGTCGAG-TGAATCT-A----ATA-TGA--GGCTGCG-A-C-AAATGTGTT-T------CCACTTT-----------GTGAACGCAGGC-AC---TAGT--TCTGAA-TTTT-A-T-AAT-AAATGGACAGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATGAA--ACCGATTG-TTGTAAA-TGTCGGAATATATT----A---------T-------------TG-AACAAGTG-AATGCTAT-ATATAC-AGCTt
blockSeqs : CA A T A A T T A CA C T T A A G T A A . T TCAA . TT T T T C A G TT CA G . A ACAAATACATTA . . A A A GTCA TA . GT TTA C AAG GATGACAT C GAAT G AAAA G GCCCAT A AAA G . T AAT G C G C C G T T . A CTTGAT A G . A AA C A T CT T A TAT CA TT A CTTC T AA C AGTTGTGGTTT T C A A TTGCTAA C A AAGCAG TA TTT T A TAAG GATTTACCG A . A T . . A . T AT G A TA TAGTTTTGAAAGATATT G TAA A A T TT A T T T A G T T . G A GAT A . A . . TA T T C T T A TGTTT GA CC T CG A A TA . G T T NNNNNNNNNNNNNNG T C GA T GT T TCT C . A A T AAG TGTAA T A ATCA G T A T T ATAT TC TTCATTGTTAAAACCC TGAA GT AG GGC A A G AC G A ATATAG TTCTCAC T T GTAGCTATTGCA G TAC . T ACGCC C AA GC T TAT A AGAT TATGG ATTT GGGTC T G G AT ATAT T C GTATTA A TGTAACTTAGA T TT GTATTATT CAATCAA TCA TACCA A GATC TGC TA GCGTG GT C T C . T G GATAC AT GTGAA T C ATT A T AATAAGATTGT CA T TATCT T AA TTTTC T G CTAGCAA AAA GA TCTATCAAATGCATGCCCGTT TTTA TC T GAGTAA GATAAA A AATCTT T AG A A A C ATACAGA TAAATAGAATC ACGCAG T ACT TA T G T A C T C TGG A T C CT . GTAA AATATACTGTATTAT A T .
blockSeqs : . . A . . T . . C G . . . . . . G . . A . . AT T . T . . G T . G . T A . . . T . CT T . T . . . ATGAATT . . . . . . . CCG . . . . G C . . . . C . . . . A . . A A . . A . . A AT CA TT A CTTC T AA C AGTTGTGGTT A A . A CTGCTAA T A AAGCAG TA TTT T A A TGAT . . . . . . . . . T G A TG T G T . . . T . . . . . G T T . . . GAT A . C . . . T . . T . A . GA TC . GT A . G . A . T . T . A . CT T . C . . A G . CTAT T . . G C A . . . TC . . . . . . . . . . . . . T . . . . . . . . . G . . . T TATGT . GGGCC . G . . A . . . . AATT . TG TATCCTC TTC . C . G . G . . . . . . . . . GA GG . . . A . ATGCAT . C TTA . . AG . . C . . ATAAGTTGTGAGG . . A TG . . CTA . . . . . G CA GATGG G . . . . . . . . . . G . . . . . AAA GAACTATTGTATT A . .
blockSeqs : . . A . . T . . T T . . . . . . G . . T . . A T . T . . C T . G . T A . . . . . AT T . . . . . CGAAT . . . . . . . A . . . . G . . . . . T . . . . . . . . A . . . . . AT . . . T . . C . T C . . . C . AA . . . . . . . . . . T . A . . . . . . . . . . T . . . . GAT . . T . . . T . . T . . . GA C . CG A . T . . . . . T . G . CT . . . . . A T . T T . . G . A . . . TC . . . . . . . . . . . . . T . . . . . . . . . G . . . . TAT . . . G . . T . . . . AT . T T CCT . T . . . . . . . . . . . . . AA . . . . . . ATGA . . . . . . . . A . . ATACATGTAGTT . . T . . . AA . . . . . . C . T . . . . . . . . . . T . . . . . . GAATATATTAT . . .
blockSeqs : . . A . . . . . C T . . . . . . . . . T . . T T . . . . G . . G . T . . . . . . GT T . . . . . GAAT . . . . . . . A . . . . G . . . . . T . . . . . . . . . . . . A . . . . . . T . . . . A . . T . . . T . . . . . . GA C . GT . . T . . . . . . . G . GT . . . . . . T . T T . . G . A . . . C . . . . . . . . . . . . . T . . . . . . . . . G . . . . AT . . . G . . T . . . . C . T T TGC . A . . . . . . . . . . . . . AT . . . . . . TAA . . . . . . . . T . . AAATAGTCAT . . T . . . AA . . . . . . A . G . . . . . . . . . . T . . . . . . GACTAAATAT . . .
blockSeqs : . . . . . . . . C T . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . GAT . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . C C . GT . . T . . . . . . . G . GC . . . . . . T . T T . . G . A . . . C . . . . . . . . . . . . . T . . . . . . . . . G . . . . AT . . . G . . T . . . . T . T T TC . T . . . . . . . . . . . . . C . . . . . . GCA . . . . . . . . T . . ATAGATAT . . T . . . AA . . . . . . C . T . . . . . . . . . . T . . . . . . GAT . . .
blockSeqs : . . . . . GAT . . . . . . . A . . . . . . . . . . . . . . . G . . . . . . . . . . . . G . . . . . . T . T A . . G . A . . . C . . . . . . . . . . . . . A . . . . . . . . . A . . . . AT . . . G . . T . . . . T . T T TC . . . . . . . . . . . . . . . A . . . . . . TGA . . . . . . . . T . . ATAGTT . . T . . . TA . . . . . . A . T . . . . . . . . . . . . . . . . . GAT . . .
blockSeqs : . . . . . . . . . . . . . . T C . . G . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . G . . T . . . . T . T T TC . . . . . . . . . . . . . . . A . . . . . . TCG . . . . . . . . T . . ATAGTT . . A . . . A . . . . . . A . T . . . . . . . . . . . . . . . . . AT . . .
blockSeqs : . . T . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . T . T T TC . . . . . . . . . . . . . . . A . . . . . . TCG . . . . . . . . G . . ATAGTT . . T . . . A . . . . . . A . T . . . . . . . . . . . . . . . . . AT .
blockSeqs : . . . . . . . . . . . . . . . . T . T T TC . . . . . . . . . . . . . . . A . . . . . . TC . . . . . . . . A . . ATATT . . . . . . . . . . . . . C . . . . . .
blockSeqs : . . . . . . . . T . . T TC . . . . . . . . . . . . . . . A . . . . . . TC . . . . . . . . . . . ATAGT . . . . . C . . . .
blockSeqs : . . T . . T . . . . . . . . . . . . . . . . . . . . . . .
blockSeqCons : C* T* ** A*********** T* GAAT******* A**** AT* ** ** C*** ** *** GA G* **** TAT** N****** ATAGTT******************************* GAATAT*******************************
originalCons : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCT-ATTATTTAGCAGTTGCTAGGCCAAGTTCTTTGGCAGTTAATTGAGATTATTCTTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAA--GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTC------GC---A--C--------A------T-A-------G-T--T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGA-----------A---------T-------------TG-AACAAGTG-AATGATATAATATAC-AGCT
finalCons : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGGA-----------CTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACTGAAT-------GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AAA----GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCTAT-TATTTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAGATTATTC---GGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGA---GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-GTCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGA-ACTN------GC---A--CATAGTT-------------------------------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGGAATAT-------------------------------TG-AACAAGTG-AATGATATAATATAC-AGCT
Alignments
lowQualScore : 11111111111111111111111111111111
lowQualScore : 1 1 1 1 1111 333333333333 2 11 11 111 111 11111111111 1 1111 1111 111111 11111 111 1 222222 1 1 11 1 1 11 2 111 22 22 22 1 11 55555555555 1 2222222 111111 222 2222 4444444444444 11 1 22 1 1 11 1 11 111 11111111111111111111111111111111 2222 1 1 1 11 1 1 1 1 11111 11 1 1 333333333333333 1 1 1 1 11111111 11 2222222222222222 111111 1111111 222222222222 11111 11 1111 22222 22222 1111 11111111111111 11111111111111 11111111 22222 1111 11111 1 2222222222222 1 11111 11111 1111111 11111111111111 111111 111111 111111 1111111 1111111 22222222222 111111 111 1111 777777777777777777777777777777777777
lowQualScore : 99 6 3 6 6 5 3 6 77 1 6 6 6 3 6 6 2 6 6 3 4444 6 888 3 6 7 6 6 2 99 99 2 99 3 444444444444 6 6 6 0 6 9999 44 5 33 000 5 000 0 44444444444 1 2222 5 2222 5 666666 5 44444 6 6 6 111 6 5 6 6 6 8 3 8 8 8 888888 3 0 0 3 33 0 0 9 0 88 8 0 999 0 22 22 22 0 6 0 11 5 00000000000 1 8 5 3 9999999 6 3 777777 66 111 3 3 5555 7777777777777 7 88 3 00 3 3 7 33 0 33 2 3 444 99999999999999999999999999999999 2 6666 0 0 0 22 6 6 6 6 6 5 5 1 77 5 5 999 1 5 3 5 5 77 5 5 5 6 3 66666 1 66 6 77 2 5 77 5 5 5 5 1 111111111111111 2 5 99 5 77 0 888 0 4 5 2 0 3 777 00000000 1 4 9999 1 8 2 4 4 9999 44 9999999999999999 9999 66 66 777 4 4 4 55 4 4 111111 4444444 7 4 222222222222 4 777 4 4 11111 4 66 22 4 777 4 6666 00000 9999 22222 4 3 3 55 0000 3 3 999999 3 66666666666666 3 555 11111111111111 11111111 555 11111 3 0000 555 77 88888 44 3 3 3 3 3 3 88888 888 22222 3 3 555 0 3 6666666666666 55 0 55555 3 55 44444 3 8888888 8 666 99999999999999 3 666 3 88 000000 7777 55 1 777777 111111 4 4444444 4 55 3 3 3 7 6666666 66666666666 555555 3 666 55 4 4 4 4 4 4 4 333 4 4 4 66 4 7777 444444444444444444444444444444444444 8 5 0 0 5
lowQualScore : .. . . . . . . . .. . . . . . . . . . . . .... . ... . . . . . . .. .. . .. . ............ . . . . . .... .. . .. ... . ... . ........... . .... . .... . ...... . ..... . . . ... . . . . . . . . . . ...... . . . . .. . . . . .. . . ... . .. .. .. . . . .. . ........... . . . . ....... . . ...... .. ... . . .... ............. . .. . .. . . . .. . .. . . ... ................................ . .... . . . .. . . . . . . . . .. . . ... . . . . . .. . . . . . ..... . .. . .. . . .. . . . . . ............... . . .. . .. . ... . . . . . . ... ........ . . .... . . . . . .... .. ................ .... .. .. ... . . . .. . . ...... ....... . . ............ . ... . . ..... . .. .. . ... . .... ..... .... ..... . . . .. .... . . ...... . .............. . ... .............. ........ ... ..... . .... ... .. ..... .. . . . . . . ..... ... ..... . . ... . . ............. .. . ..... . .. ..... . ....... . ... .............. . ... . .. ...... .... .. . ...... ...... . ....... . .. . . . . ....... ........... ...... . ... .. . . . . . . . ... . . . .. . .... .................................... . . . . .
lowQualScore : 22 7 5 7 7 5 3 7 77 5 7 7 7 3 7 7 0 7 7 5 2222 7 777 2 7 3 7 7 5 88 22 5 22 5 888888888888 7 7 7 0 7 3333 00 7 66 000 7 000 1 11111111111 4 1111 7 1111 7 444444 7 66666 7 7 7 777 7 0 7 7 7 0 8 0 0 0 888888 2 0 0 2 22 0 0 8 2 33 0 4 222 8 00 00 00 6 4 6 22 0 55555555555 0 8 5 2 8888888 5 2 000000 88 555 2 2 3333 0000000000000 3 33 3 77 3 3 3 88 0 22 5 2 000 88888888888888888888888888888888 5 5555 0 0 0 55 7 7 7 7 7 0 0 4 99 7 7 111 4 7 0 7 7 99 0 7 7 7 3 77777 7 00 7 33 0 7 11 7 7 7 7 4 222222222222222 4 0 55 0 55 0 888 0 4 0 4 1 1 888 99999999 0 4 4444 1 9 2 4 4 4444 44 4444444444444444 4444 11 11 888 0 0 0 55 0 0 555555 4444444 7 4 888888888888 4 888 4 4 11111 4 11 99 4 888 4 5555 44444 4444 22222 4 6 6 00 8888 6 6 666666 3 00000000000000 3 888 44444444444444 44444444 888 77777 3 4444 888 99 33333 66 3 3 3 3 3 3 33333 333 99999 3 3 888 0 3 2222222222222 00 9 55555 6 00 11111 6 2222222 1 444 11111111111111 6 444 6 66 555555 7777 55 1 000000 555555 0 1111111 0 55 6 6 6 3 0000000 44444444444 555555 6 444 55 0 4 4 4 4 4 4 333 4 4 4 11 4 2222 999999999999999999999999999999999999 9 0 4 4 0
consensus : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCT-ATTATTTAGCAGTTGCTAGGCCAAGTTCTTTGGCAGTTAATTGAGTTATTATTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGA-GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGAA-------CTNGC---A------CA------T-A---G-T--T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGG----A-A--------TA------T-----------TG-AACAAGTG-AATGATATAATATAC-AGCT
Reference ( family-3080 ) : NCCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGAT-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTAAC-ATTAA-GTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGA-TGGT--TTTT-ACAGGAC-TTTCTTTTG--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAA-GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAAATGAACTGCT-ATTATTTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAG--ATTATTCGGCAGTTTTTCTAAAACAGTTCCAAGCAGTTGTGG-TTTTACNACTACATTGTAAACTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTTTA--TTT---TT----AT--TTACTAAGAAAGTA--TTTATGAA-TTAACATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGCAAATCAATACAA--TA-ATCA-TAATACCGTTGGACAGAAC-TATATCAAT---------------T----------------CGTGTCATTTT-A-GT-CGATCGGGTTCAAAAA-GCATCGG-GTGTGTTGTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTNTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGA-GATT-----GGAGAGAGGCATGGTCCGCCTT-CTTGAGTTCTTCCGAGATTCGTNGAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT-CTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGAA-------CTNGC---A------CA------T-A---G-T--T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGG----A-A--------TA------T-----------TG-AACAAGTG-AATGATATAATATAC-AGCT
gi|1 : CCTCCA--AAA--TAAAT-CCCA-CTTTCTT-GAACATTTGAAGGATCATCCCTG-AAG-TC--TGAGACTGTCTTTTCCCG-TCCCACTTCT-CTCT-GTCCTAAATGCAG-TGG-AT-AAAT-TCAGGGACTTCTTATTCCTGC----ATGT-T-GTCCT-AAAT-ATCCCAGTAAC-ATTA--GTGTGACTTT-GT--AG-AACTATTGTAGG-----------ACTCAAAATGTTCTTGC-AAATTCCCACTACCACTGCAGA-TGGT--TTT--ACAGGACATTTCTTTTG--TTTTT---CA-GGACT----ACT--GA----ATTGATAATAA----A-AA----GTTA-TAAGTCCC------TCAAATTTCCT-AA--AA-GTCTCAC-ACCATAA-TA---TATGCAG-ACCA-ATGCA-GG-ACATTAT-AT-GCTTTT-CCAGGA-CATGTTGATA------AAAGT-ATAGTGCAACAAAA--GTCT-TGGA-CTTTCTGTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT---TATTTAG----------GC--AGTTCTTGGGCAGTTAA--GAG--ATTATTTGGCAGTTTCT----AACAGTTC-AAGC------------TACAA-TATATTGTAAA---------ATT--TTAT------TTAAATTTTTGTAA---CTACATGTATAAGATTTTTTTTTTTTTTT--TTT---TTTTTTAT--TTACTAAGAAAGTAAATTTATGAA-TTAACTAACATACTTGCAAAGTTTTAAATTATTTAAATCAACTTGATTTATAATTTTTCAATCAGAAATGCAAATAGCAAATCAATACAAAATA-ATCA-TAATACCGTTGGACAGAACATATATCAATGTTATTGAAAGATATT----------------CGTGTCATTTTTA-GT-CGATCGGGTTCAAAAA-ACATCGG-GTGTGTTATGCGTCAATTCAAATAAAAACGA-CCGATAACTCTGT-G-CAAGCATGACGCGCGTTTT-GACA-GATTCAGGGATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGTTGG-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-CGATATACCAGATGTTATACTGAGTAAGATATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTTTAAT-CTCAGCGA--ATT-----GTTGGACTGCATGGT-CGCC-T-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATA-TTCATTACTTGGA-CTT-GTTCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCGACG-ATATTTTTGAGATTA---------------ATGA-TTTTGT-GCAAGACGAG-GACCC---GGACGAAGG-CCTCGTCGGCGCGG-CTCC---TAC-ACCGAGGTCCATTTTGAAA-TGGAATGTAAAACGTAGAGTTGGGAT---C---G----TACTCAATTATTT-TTG----TTT-A-TTT-TA-ATTT-A-TTA----ATT-CTGT----------------GA----GAT--C--G---CA--TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATATATATAACCACT-CCGATGT------------TAA-AATATTT---GGACC-C-----CC-ACAAA--TG---TGCA-TTTT---GCAC-CATAGCCAT---TAATAT--TGT----TA-----T-AACTTTGTT-A--TAAAT---GAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------T-TT---C-T--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC----TTT-C-TTCTGTGGAAG-T-CA-----T-T-A-GAT-----T-AT-C---CAAA-A-------TGG---GA--TGTTT-----ATCAAC-TTG--TGA-----A-ATG-AGAA-------CT-GC---A------C-------T-A---G-T--T------TTAT----ATC--CTT------ACTT------TTC-GGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------CAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-AT-AA--ACTTAACGTTTGT----TGTTGG----A-A--------TA------TTCTTGTATTAATG-AAAAAGTG-AATGATATTAAATACGAGCT
gi|10 : CCTCCACAAAAA-TACTT-CCCAACTTTACTTGACTATCTTTAGGAT---TCCTGGAAGATCCATGAGACTCCTTTTTTCCG-TCCT-----T-CTCT-G--CTAAATGCAG-TGGGAT-AA-T-TCAGG-ACTTCTTATGTCTGC----AT-T-TTGTCCTTAAA--A--CCAGTAACCATTAA-GTGTGACTTTTGT--AGGAACT--TGAAGG------------CTCAAT-GGTCCT-GC-AAATTCCCACTACACCTGCAG--TGGTCATTTT-ACAGGAC-TTTCCTTTGGTTTTTT---CACGGACT---T-CTATGA----ATTGA-AATAA----AGAA----GTTA-TAAGTCCCGCCCATTCAATTATTCT-AA--AAAGTCCTAC-AC-ATGA-TA---TATTCAG-ACAAGATGTACGG-ACATTATGATTGCTTTTTC-AGGAACTTCTTGATA------A---TGAT-GTGCAACAAAAA-GTCTCTGGAACTTTCTGTACAGAGTTCTAACTCCAAGGAAAAAATGAACTGTT-ATCATTTAGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAGTTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGC
gi|11 : TTTGTT-T--TAAAT----AAT-A-TATCACTAT------AT--AT---C----------CATA-A-T-TGTATTATT------TATT---TTC--TT---TTTACCACA-GAATGTG---TG---CCTAAGG-----CTC--T-TTTTC-TTC-ATGGA-G-T-CA------GC-ATGAT-----T-AT-TATTC-AATG-------TAA---AG--TG-TTTATCTACCGAC-TTG--TGATTTTCA-ATGAAGGGACT----CTAGC---AAGCAGACAAA----T-A---G-TCAT------TTAT----ATCTCCTG------ACTT------TCCGGGTCGCGATGAATCCTA----ATA-TGA--AGCTGCG-A-C---ATGTGTT-TC-----AAACTTTTAAATAGAATCGT-A-----GGC-AC---TAGT--TGTGAA-TTGC-A-TAAAA-AAATGG-CGGAAC-TGT-AT-TGAATGGTGATTT-T----ATAAACTGCTT---G-TTGTGTAATATTGG----A-AC-------TATTGTATT-----------TG-AACCAGTGTAACAATATAA---AC-AGCT
gi|12 : tgtttctaaattCCTCCA--AAAA-TAA-T-CCCA-CTTTTCTTGAATATTTGAAGGAT-ATCCCTGGAA--TCC-TGAGACTGCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGG----AAT-TCAGG-ACTACTTATTCCTGC----AT-T-A-GGAC--AAAT-A---CATT-AC--TCAA-ATGT----------------CC--TG------------------CAAA-T-TCC---C-AA--------TACCACTGCAGA-TG----TTTT-ACAGGAC-TCTTCTTTGT-TTTTT---CA-GGACT---TACT--G-----AT-GA-AAT-A----A-AA----GTTA-TAA-TCCC------TCAAATTTCTA-AA--A--GTCTCAA-AC-ATGA-TA---TATTCAAGA-CA-ATGCA-GG-ACATTAT-ATCGCTTTT-C-AGGA-CTTGTTGACACTTGATAAAGC-AT-GTGCAAC--AAA-GTCT-TGGA-CTTTCATTACAGTGTt
gi|13 : CTTCTTCTCTAGTCCTAA-TGCAGGTGGGATTAAGTATCAGG-ACT-CTTAATTCTGCTCAAGT-TAT-GTCCTTAAATTATCC-AGTAAC-ATTAAAGTGTGACTTT-GT--AGGAACT--TGTAGG-----------ACTCAAC-TG-CCT-GCAAA-TTCCCACTACCACTGCAGA-TGCT--TTTTAACAGGAC-TTTCTTTTG--TTTTCTTACA-GGACT---TGCTC-GA----AT-GACAATAAGAATA-GA----GTTAGTAAGT-CC------TCATATTTCCT-AACCG--GTCTCACGAC-ATAATTAAATTATTCAGGA-CA-ATGGA-AGCACActa
gi|14 : -CCAAGGAAAAAATGAACTGTT-ATCATTTAGCAGTTGCTAGGCCAAGTTCTTTGGGAGTTAATTGAGTTATTCTTCGGCAGTTTTTCTAAAACAGTTTCAAGCAGTTGTGGTTTTTACTACTAC-TTGTAAATTGCTAAGAATTCATTATAAGCAGTTAATTCTTAGCAGTTTC-ACTTAT-TAAGg
gi|15 : tCCTCCA--AAAA-TAAAT-CCCA-TTTTCTT-GAATATTTGAAGGAT-ATCCCTGGAAG-TCT-TAAGACTTCCTTTTCCAG-TCCCACTTTT-TTCT-TTCGTAA-TGCAG-TGGGAT-AA-T-TCAGG-AATTCTGATTCCTGC----AT-T-T-GTCCTTTAAT-ATCCCAGTAAC-ATTAA-GTGTCACTTT-GTCAAGGAACT--TTTAGGACAAATACATTACTCAAA-TGTCTT-GC-AATTTCCCACTACCACTGCAGA-TGAT--TTTT-ACActgagtctatcagttattatattttttaaaagcagttcaattcatttagtcctaataaatatctaactttgcaaactggacaagtgca
gi|16 : ------AT-TAT---T----------TTCA-A---T-------T------TATT---C-CT-TT---TT-----CA-GAGCGT----TC---TT--GGG-------C--T-GTT-C-TTC-ATAAAAG-T-CAGATACTAT-C-GATGTGAAT-AC-C---CAAA-A-------GCA---GG--TG-TT-----A--AA--TTGAATGAAG---A-ATAAAGAATCACACTCTATC---AAATG--CA------T-GCCCG-T--T------CCAT----GCC--CAC------CCTT------TCCATAT-GAG-TGTA-----------A-TGA--GACCGCA-A-C-AAATGTGTT-T------CAACTTT-----------GTAA------GC-AC---
gi|17 : ttattttcTTCTTCCAATATTCGTCGAGGCTAATATTT--------GAA-CTG-G-TCTCC-GGTTTC-CGGANN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGATTTTTGTCGCAGGACGGA-AACCCTC----CCATGGCC--AGCC--CGCGG-CTCCTCTTAC-AGTAA-GTCCATTTTG
gi|18 : ggtcgcc----TAATATGGTGT----GAGGGTCT-AGCTTTGTT-T--TATAT---AAAT-A-TACCATTGT------AT-TA----T----------TTCA-A-T-T-------T------TATT---T-C--TT---TTC----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-ATGGAAG-T-CA-----TGC-A-CAT-----T-AT-C---CAAA-A-------TGA---GG--TGTTT-----ATCAAC-TTG--TGA-----A-ATGAAGGA-------CTAGC---A------CATACATGT-A---G-T--T------TTAT----
gi|19 : gC-TTTCTTTTA--TTTTT---CA-GGACTAAGTACT--GA-----T-GA-AATAA----A-AAAAAAGTTA-CAAGTCCC------TCAAATTTCTA-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGA-CA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGGT
gi|2 : CCTCCA--AAAA-TAAAT-CCCA-CTTTCTTTGAATATTTGAAGGATTATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAG-TCCCACTTCT-CTCT-GTCCTAA-TGCAG-TGGGAT-AAGT-TCAGG-ACTTCTTATTCCTGC----AT-T-T-GTCCTTAAAT-ATCCCAGTA-C-ATTAA-GTGTGACTT--GT--AGGAACT--TGTAGC-----------ACTCAAA-TGTCCT-GC-AA-TTCCCACTACCACTGCAGAATGGT--TTT--ACAGGAC-TTTCTTT-G--TTTTT---CA-GGACT---TACT--GA----AT-GA-AATAA----A-AA----GT-A-TAAGTTCC------TCAAATTTCCT-AA--A--GTCTCAC-AC-ATGA-TA---TATTCAGGACCA-ATGCA-GG-ACATTAT-ATTGCTTTT-C-AGGA-CTTGTTGATA------AAAGT-AT-GTGCAACAAAAAAGTCT-TGGA-CTTTC-GTACAGGGTT--AAC-CCAAGGAAAAA-TGAACTGCT---TATTTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAG--ATTATT-GGCAGTTTT-CTAA--CAGTTCCAAGC-----------TTACAAATATATTGT----------GAATTTATT-TAA------AATTCT--GTAA---CTACATGTATAAGATTTTTTTTTTTTTTAAGTTT---TG----AT--TTACTAAGAAAGTA--TTTATGAAATTAACATACATATTTGCAAGGTT--AAATTATTTAAATCAACTTGATTTATAATTTT-CAACCAGAAATGCAA-TAGCAAATCAAT-CAA--TA-ATCAATAATACCGTTGGACAGA-C-TATATCAAT---------------T----------------CGTGTCATTTT---GT-CGATCGGGTTCAAAAA-GCATCGGTGTGTGT-GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTTT-GACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTT-TAAT-CTCAGCGA-GATT-----GGAGAGAGGCATGGTCCGCCTT-TTTGAGTTCTTCCGAGATTCGTGTAAGCTAATATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGT-ATTGAGTCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGAGAGACCC-CGGGACGAAGGCCCTCGTCGTCGCGG--TCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAG-TTGGAT---C---T----TACTCAATTA-TT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATT--TGT----------------GA----GAT--C--G---CAT-T--ATCC-T--C-TG--TGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AAAATTT---GGA-C-C-----CC-ACAAA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAA-A---TGT----TA-----T-AACTTTGTT-A--TAAAT---TAAT-ACTACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGTGA-GAT-----T-AT-C---C-AA-A-------TCG---GG--TG-TT-----ATCAAC-TTT--GGA-----A-ATGAAGAA-------CTTGC---A------CA------T-A-----T--T------CTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGA---TTATTG-TG-G-ATAAA--A-TTAACG-TTGT----TGTTGG----------------A------T-----------TG-AACAAGTG-AATGATATAATATAC-AGCTca
gi|20 : cCTGCA-AAC-AAACATGTTCT------CAACTTT-----------GAGA-----GAG-AC-----AC--TCTAAA-TTGCGA-T-GAA-A--TGGATGGAAC-TGACAACTGAAG--T--TTA-TG-GCATGAA--ACT----G-TGAT----TGTTGGACTAA-A--------TA------T-----------TA-AACAAG
gi|21 : tgaCCATTGATT-CCGT-AAATTCACA---CCAGT--G-AACAAAGAATT------TGTG-AACAGCTGTTCTG---------AT-CCAGATGT--TA-TGAGTGCA-CATTTTATACTCAGTATT--AT-AAAC-TGGT
gi|22 : acaggcaagtttT-TC-ATTC-T--C-TG-TTGTTT------TA-------ATGAT----ATAACCCCA-TCGATGT------------TAA-AATATTT---GGA-CTC-----TC-ACAAA--T-G-TTGCA-TTTT---GCAC-CATAGCCA----T
gi|23 : CCTCCA--AAAAATAAATACCCG-CTTTCTT-GAATATTTGAAAGGA-ATCCCTGGAAG-TCC-TGAGACTTCCTTTTCCAGTTCCCACCT
gi|24 : -TTTCTTTTG--TTTTT---CA-GGACT---TACT--GATGACAT-AA-AA-AA----A-AA----GATA-AAAGTCCC------TCAAATTTCCTAAA--A--GTCTCA
gi|3 : -CCAAGGAAAAA-TGAACTGCTTATT--TTAGCAGTTGCTAGGC--AGTTCTTTGGCAGTTAA--GAG--ATTATTTGGCAGTTTT-CTAA--CAGTTCAAAGCAGTTGTGG-TTTTACTACTAC-TTGTAAACTGCTAAGAATTCAGTATAAGCAGTTAATTCTTAGCAGTTTCTACATGTATAAGATTTTTTTTTTTTT-A--TTTGATTT----ACCGTTACT-----------TTCCTGAA-TTAAAATACATATTTGCAAAGTTT-AAATTATTTAAATCAACTTGATTTATAATTTT-CAATCAGAAATGCAA-TAGGAAATCAATACAA--TATATCA-TAATACCGTTGTACAGAAC-TGTATCAAT---------------TAGTTTTGAAAGATATTCGTGTCATTT--A-AT-CGATCGGGTTCAAAAAAGCATCGG-GTGTGTTATGCGTCAATTTAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGGATGGCGCGCGTTTT-AACA-GATTCAGG-ATTGCGCCTTTGATTGCTGT-AAAATGACAGTCTCAGT--GGA-CAAAGA-------------TAGCTGCTGTTCTTTAAA-GGATAT-CCAGATGTTCTA-TGAGTAAG-TATTT--TACTGTGTATTTCA---GAC-TGATGATTTTTTAAT-CTCAGCGA-GATTTGTTTGGAC---TGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTCGAAGCTAATATTTCATTACTTGGA-CT--G-TCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTTTGT-GCAAGACGA--GACCC-CGGGACGAAGGCCCTCGTCG-CGCGG-CTCC---TAC-ACCGA-GTCCATTTTGAAA-TGGAATGTAAAATGTAGAGTTGGGA----C---T----TACTCAATTATTT-TTG----TTTGATTTTATA---TT-ATTTAATATATT-CTGTTTCATTGTTAAAACCCGA----AAT--CAGA---CATATCAATCC-T--C-TGATTGTTT------T
gi|3 : TTTGTTGA--AAAAT---TAATTA-TACCATTGTGTATTAAT-TATA--T----------TTCA-A-T-T-------TATCCTCTATTCAAT-CAATTTCATT-----CA-GAGGGTGATCTGTGCCC--AGG-----CTCGTT-CTT-A-CTT-GTGGAAGTT-CA-----TGTAA-GATGG---T-AT-C---C-AA-A-------Ttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggatttgttgaaaaattaattataccattgtgtattaattatatttcaatttatcctctattcaatcaatttcattcagagggtgatctgtgcccaggctcgttcttacttgtggaagttcatgtaagatggtatccaaataaatggatat
gi|4 : ccaaggaaaaatgaactgcttattttagcagttgctaggcagttctttggcagttaagagattatttggcagttttctaacagttcaaagcagttgtggttttactactacttgtaaactgctaagaattcagtataagcagttaattcttagcagtttctacatgtataagatttttttttttttatttgatttaccgttactttcctgaattaaaatacatatttgcaaagtttaaattatttaaatcaacttgatttataattttcaatcagaaatgcaataggaaatcaatacaatatatcataataccgttgtacagaactgtatcaattagttttgaaagatattcgtgtcatttaatcgatcgggttcaaaaaagcatcgggtgtgttatgcgtcaatttaaataaaaaggaccgataactctgtgcaaggatggcgcgcgttttaacagattcaggattgcgcctttgattgctgtaaaatgacagtctcagtggacaaagatagctgctgttctttaaaggatatccagatgttctatgagtaagtattttactgtgtatttcagactgatgattttttaatctcagcgagatttgtttggactgcatggtcgccttcttgagttcttccgagattcgtcgaagctaatatttcattacttggactgtcgccgtcttcgaagtattagatcaagcctcgacgaatatttttgagattaatgatttttgtgcaagacgagaccccgggacgaaggccctcgtcgcgcggctcctacaccgagtccattttgaaatggaatgtaaaatgtagagttgggacttactcaattatttttgtttgattttatattatttaatatattctgtttcattgttaaaacccgaaatcagacatatcaatcctctgattgtttttcaccatagcttataatgtatataaataaacactatcctccgcacaatgatttatgaggactataccaatggtggacccccattatttgaatgtctggtcttacaggtacaatctggtgcccacatagcctttccctaaatatctcgctttccatagtgaaactttatagattttagattggaAA--CA-ACCA---ATAGCATTGGACA--AC--------AT---------------T----------------T-TATCATTTT-AAGTACAANNNNNNNNNNNNN-NNNNNNN-NNNNN--GTGCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGT-G-CAAGCATGGCGCGCGTTT--GACA-GATTCAGG-ATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGA-GGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCAT-AGAC-TGATGATTTTT-AAT-CTCAGCGA-GATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGTTATTAGATCA-GCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGG-CTCC---TACCACCGA-GTCCATTTTGAAAATGGAATGTAAAATGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTT-ATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TG--TTGCA-TTTT---GCAC-CATAGCCA----TAA-AT--TGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTGT------AT-TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TTT----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TCG---G---TG-TT-----ATCAAC-TTG--TGA-----A-ATGAAGAA-------CTTGC---A------CA------T-A---G-T--T------TTAT----ATC---TT------ACTT------TTCGGGTCGAG-TGAATCA-A----ATA-TGA--AGCTGCG-A-C-AAATGTGTT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-A-T-TAA-AAAAGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-----------------A------T-----------TGAAACAAGTG-AATGATATAATATAC-AGCTaaatggatat
gi|5 : GCGTCAATTCAAATAAAAAGGA-CCGATAACTCTGTTG-CAAGCATGGCGCGCGTTTTTGACA-GAT-CAGGGATTGCGCCTT-GATTGCTGTTAAAATGACAGTCTCAGT--G-A-CAA-GAATTA--CTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTTTA-TGAGTAAG-TATTT--TACTGTGTATTTCATTAGACCTGATGATTTTTTAATTCTCAGCGAAGATT-----GGAGAGAGGCATG--TCGCCTTTCTTGAGTTCTTCCGAGATTCGT-GAAGCTA-TATTTCATTACTTGGAACTTAG-TCGCCAG-TCTTTCGAAGTTATTAGATCAAGCCTCGACGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCCTCGCGGTCTCC---TACCACCG--GTC-ATTTGAAAA-TGGAATGTAAA-TGTAGAGTTTGGAT---C---T----TACTCAATTATTT-TTG----TTTGA-TTTATA-ATTTTATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCCGT--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TGGCTTGCATTTTT---GCAC-CATAGCCA----TAA-AT--TGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTG-------A--TAT---T----------TTCA-ATT-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGG-AG-T-CA-----TGT-A-GAT-----T-ATCC---C-AA-A-------TC----GG--TG-TT-----ATCAACTTTG--GGA-----A-ATGAAGAA-------CTTGC---A------CA------T-A---G-T--T------TTAT----AT---CTT------ACTT------TTTCGGTCGAG-TGAATC--A----ATT-TGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--TCTGAA-TTGC-ATT-AAACAAATGGACGGAAC-TGA-ATGTGGA---TTA-TG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTG-----------------A------T-----------TGAAACAAGTG-AATGATATAATATAC-AGCT
gi|6 : GCGTCAATTCAAATAAAAAGGAACCGATAACTCTGT-GTCAAGCATGGCGCGCGTTTT-GACAAGATTCAGGGATTGCGCCTTTGAT-GCTGT-AAAATGACAGTCTCAGT--G-A-CAAAGAATTGATCTATATGTAGCTGCTGTTCTATAGAAGGATAT-CCAGATGTTATA-TGAGTAAG-TATTT--TACTGTGTATT-CAT-AGAC-TGATGATTTTTTAAT-CTCAGCGAAGATT-----GGAGAGAGGCATGGTC-GCCTT-CTTGAGTTCTTCCGAGATTCGTGTAAGCTA-TATTTCATTACTTGGA-CTT-G-TCGCC-G-TCTT-CGAAGT-ATTAGATCAAGCCTCG-CGAATATTTTTGAGATTA---------------ATGATTTT-GT-GCAAGACGAG-GACCC-CGGGACGAAGGCCCTCGTCGTCGCGGTCTCC---TAC-ACCGC-GTCCATTTTGAAA-TGGAATGTAAA-TGTAGAGTT-GGAT---C---T----TACTCAATTATTT-TTG----TTTGACTTTATA-ATTT-ATTTA----ATTTCTGT----------------GA----GAT--C--G---CAT-TC-ATCC-T--C-TG-TTGTTT------TA-------ATGATTTATATAACCACT-CCGATGT------------TAA-AATATTT---GGA-C-C-----CC-AC-AA--TGG-TTGCA-TTTT---GCAC-CATAGCCA----TAA-AT--TGT----TA-----T-AACTTT-TT-A--TAAAT---TAAT-A-TACCATTGT------A--TAT---T----------TTCA-A-T-T-------T------TATT---T-C--TT---TT-----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-C-TTC-GTGGAAG-T-CA-----TGT-A-GAT-----T-AT-C---C-AA-A-------TC----GG--TG-TT-----ATCAAC-TTT--GGA-----A-ATGAAGAA-------CTTGC---A------CA------T-A---G----T------TTAT----ATC--CTT------ACTT------TTCGGGTCGAG-TGAATC--A----ATATTGA--AGCTGCG-A-C-AAATGT-TT-T------AAACTTT-----------GTGA-----TGC-AC---TAGT--T-TGAA-TTGC-A-T-AAA-AAATGGACGGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATAAA--ACTTAACG-TTGT----TGTTGG----------------A------T-----------TG-AACAAGTG-AATGATATAATATAC-AGCTt
gi|7 : GAT---CCTAT----TACTCATTAATTTATTGATCATTT----TTATA-AT---GATTA----ATT-CCAT----------------GATGAAGATGTC--GGGCCAT-TC-ATCC-TACCGTG-TTGTTTATATAGTATTCTCACGTAATTCATAGAGCAATTTCCGATGTGTAGCTATTGCACAAGAATCTTTTACGGA-C-CACGCCCT-ACAAAAATAG-TTGCA-TTTTTATGCAAACATAGCCAAGATTAATATGTTGTATTTTA-----TTAACTTTGTT-AATTAGATATATAA--A-TACCATTGA------ATATAT---TGTAACTTAGATTCATA-TGT-------T------TATT---TGC--TT---TTA----CAAGAGTGT----TG---CCG-AGGGCGTGCAT--T-TTT-G-TCA-GTGGAAG-TGCA-----TGT-ATGAT-----TTAT-C---T-GA-AAATAAGATTGT--GGCATG-TTTTA--ATCAAC-TTG--CTA-----ATATGAAG-A-------CCGGCAAAA------CA------TAA---G-T--TGTGAGGCTATTTTAATC--CATGAGTAAACTTGATAAATTCGGGTCGAG-CTGATCA-ATCTTAAA-AGAAGAGCTGGGAA-CAAAAAGTGTTGTATACAGAAGCTTTGATGG------GTGA-----TGCTACACTTAGTTATCTGAA-CTGt
gi|8 : TTGATATTA---------------ATTATTT--GT-GCAAGACGA---ACCC-CG--ACGAAGGCCCTCGTCGCCGC---TCCC---TAC-ACCGA-ATCCATTTTGAAA-TG-AATGTAA--TG-AGA--TTGGAT---C---T----TACTCAAT-ATTT-TTG----T--GA-TTTTTA-ATTT-ATTTA----ATC----T----------------GA----GAT--C--G---C---TC-ATCC-T--C-TG-TT-TTT------TA-------ATGATATATATAACCACT-CCGATG-------------TAA-AATATTT---GGA-C-C-----CC-ACAAA--TG---TGCA-TTTG---CCAC-CATA-CCAT---TAATAT--TGT----TA-----T-AAC--TGTT-A--TAAAT---TA---A-TACCATTGT------AT-TA----T----------TTCA-A---T-------T------TATT--------CT---TT-----CA-AGGTG-----------C--AGG-----CTA--TCTTT-C-T---GTCGA---T-CA-----T-----GAA-----T-AT-C---C-AA-A-------ATGCATGT--TA-TT-----ATCAAC-TTG--T-A-----A-ATGAAGAA-------CT-GC---A------CA------T-A---GATA-T------TTAT----ATC--C-T------AC--------TCCGA--CGA---GATTCA-A----ATA--AA--AGCTGC--A-C-AAATG-GTT-T------CAACTTT------------TGA------GC-AC---TAG---TCTGAATTTGC-A-T-AAA-AAATGGACGGAACTTGA-ATGTTG-----TATTGATGTG-A-AAA--ACTTAACG-TT-T----TGTTGA----ATATACTGTATTA------T-----------TG-AATCAGTG-AAT--TATAATATAC-AGCT
gi|9 : cCGA-GTCCACTTTGAAA-TAGA-TGTAAA-TGTAGAGTTTGGATAAGT---TGTAATACTCAATCATTT-TTG----TTCGA-TTTTTTTATTT-TTTTA----ATT-CTGT----------------GA----AAT--C--G---CAT-TC-ATCA-T--C-CG-TTGTTT------TA-------ATGAT----ATAACCCCT-CCAGTGT------------TAC-AATATTT---GGA-C-C-----CCCACAAA--TGA-T-GCA-TTTT---GCAA-CATGGCTA----T--------GT----GAGGGCCT-AGCTTTGTT-A--TAAAT--------A-TTCCATTGT------TT-TATAATT----------TTCA-A-T-T-------T------TATT---T-C--TT---TTT----CA-GAGTGT----TG---CC--AGG-----CTC--T-TTT-CCTTT-GTGAAAG-T-CA-----TGC-A-TAT-----T-AT-C---C-AA-AA------TGA---GG--TGCTT-----ATCAAC-TTG--TGA-----A-ATGAAGGA-------CTAGC---A------CA------T-A---G-T--T------TTAT----ACC--CTCTG----ACTT------TCCGGGTCGAG-TGAATCT-A----ATA-TGA--GGCTGCG-A-C-AAATGTGTT-T------CCACTTT-----------GTGAACGCAGGC-AC---TAGT--TCTGAA-TTTT-A-T-AAT-AAATGGACAGAAC-TGA-ATGTGGAT--TTATTG-TG-G-ATGAA--ACCGATTG-TTGTAAA-TGTCGG----A-ATATAT---TA------T-----------TG-AACAAGTG-AATGCTAT-ATATAC-AGCTt