lowQualScore : 111111 55555555555 2222222222222222 44444 111 3333333333333333 111111 11 222 11111111 1 1111111111111 22222 111111111 22222 3333333 1111111 2 1 2222 111111 22222 222 11 1111 3333 2222222222222222222 44444444444444444444 1 4444444 11 111 222 1 33333333333333333333333 2222 1111111 333333333 222222222222222 11111 111111 444444444444444444444 11 11111 11 11111111 11 22222 1 111111 2222222222222222222222222222 11111111111111
lowQualScore : 88 0 4 111111 4 33333333333 4 9999999999999999 11111 4 111 3 8888888888888888 6 3 3 3 3 3 3 6 111111 3 3 6 3 3 3 3 9 777 3 33 3 44 6666 9 555 6 3 3 77 555 55555555 3 6 3 8888888888888 666 66666 3 333333333 0 44444 44 4444444 88 5555555 666 3 3 5 8 555 3 3 44 3 999999 888888 44 3 3 0 77 3 3 3 3 88888 44 44 3 3 77 3 2 4444 3 6 3 000000 3 3 3 3 44 3 6 3 555 2 5 2 3 44 77777 3 999 6 3 22222 9 9 3 999 44 1 3 99 0 5 3 88 3 1111 3 55 3 0000 3 3 7 3 3 1 3 44 8888888888888888888 3 22222222222222222222 44 8888 3 77777 3 3 3 9999 6 5 3 555 77 9999999 44 7777 2 99 3 8 777 111 8 0 4 55 888 5 5 55 55 4 66 66666666666666666666666 4 8888 6 1 9999999 1 3 999999999 3 999999999999999 7777 3 55555 666666 0 88 666666666666666666666 3 3 3 3 3 3 88 22222 88 666 4 4 4 4 55 4 44 55 4 66 44444444 3 88 3 55 88 3 3 7 00000 3 3 3 6666 3 66 3 3 88 3 3 3 3 3 2 333333 2 7777777777777777777777777777 555 2 66 2 2 33 5 5 33 2 6666 2 5555 2 4 4 2 2 55 2 2 4 2 4 2 4 2 2 555 2 44444444444444 2 2 33 2 33 4 2 2 2 666666 33 33 55 33 33 2 4 2 2 33 2 55 2 444 33 2
lowQualScore : .. . . ...... . ........... . ................ ..... . ... . ................ . . . . . . . . ...... . . . . . . . . ... . .. . .. .... . ... . . . .. ... ........ . . . ............. ... ..... . ......... . ..... .. ....... .. ....... ... . . . . ... . . .. . ...... ...... .. . . . .. . . . . ..... .. .. . . .. . . .... . . . ...... . . . . .. . . . ... . . . . .. ..... . ... . . ..... . . . ... .. . . .. . . . .. . .... . .. . .... . . . . . . . .. ................... . .................... .. .... . ..... . . . .... . . . ... .. ....... .. .... . .. . . ... ... . . . .. ... . . .. .. . .. ....................... . .... . . ....... . . ......... . ............... .... . ..... ...... . .. ..................... . . . . . . .. ..... .. ... . . . . .. . .. .. . .. ........ . .. . .. .. . . . ..... . . . .... . .. . . .. . . . . . . ...... . ............................ ... . .. . . .. . . .. . .... . .... . . . . . .. . . . . . . . . . ... . .............. . . .. . .. . . . . ...... .. .. .. .. .. . . . . .. . .. . ... .. .
lowQualScore : 33 9 0 555555 0 99999999999 0 8888888888888888 44444 0 000 6 8888888888888888 2 1 1 1 1 1 1 2 999999 1 1 2 1 1 1 1 2 111 1 55 1 22 5555 2 444 2 3 3 99 888 44444444 3 3 3 3333333333333 666 77777 3 333333333 4 66666 66 2222222 66 9999999 444 6 6 4 9 888 3 3 66 3 666666 999999 44 3 3 7 99 3 3 3 3 33333 66 66 3 3 99 3 2 4444 3 7 1 555555 1 1 1 1 22 1 2 1 444 9 2 9 1 22 77777 1 666 2 1 55555 2 2 1 222 22 5 3 66 5 5 6 33 6 7777 6 00 6 9999 6 6 3 6 6 9 6 66 2222222222222222222 6 66666666666666666666 66 3333 1 77777 1 1 1 8888 2 4 3 888 99 2222222 66 1111 5 77 3 0 000 000 0 7 0 55 111 7 5 55 55 4 11 11111111111111111111111 0 4444 8 9 7777777 5 6 111111111 6 777777777777777 7777 6 55555 666666 5 66 333333333333333333333 6 6 6 6 3 3 55 77777 66 444 0 0 0 0 66 0 99 55 0 33 55555555 6 66 6 00 33 6 6 4 11111 6 6 6 4444 3 44 6 6 77 3 3 1 1 1 9 222222 9 7777777777777777777777777777 000 9 88 9 9 44 0 0 22 4 2222 4 0000 4 7 7 4 4 66 4 4 7 4 7 4 7 4 4 111 4 11111111111111 5 5 44 5 22 7 5 4 4 888888 22 44 99 22 11 2 7 4 4 22 4 66 4 111 22 4
consensus : TATAGATT-GTTTTTTAA-CA------G-AAGG-TG--G---AACCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-A--AGT-ACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATT-TT--ATG-TCATT--CCAAATAT----A-C---GAAA-CGA-TT-C--AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTT--T-----AACTCAA--TA-AACTTTGTTTT---A-CACCTCATG-AGCCGCAA-TCTCATCNTCTCT-A-A-CTG-TCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-G-TATGTTCTAAAA--TGT-T-GG-A-TATAG-----AT--GA--AG-TA-GC--A-GTTTTAAGA-AA-AC-CAGG-AA-G---TC-CAGCAATTT-T-AA-CCA-CTAATA--AA-TAG-T-TC---GCA-AGGNTAA-AATA-ATT--GG-----AACTC-TTCA---AGT-TA-T--AT-TT-GA-TATA-TC--TC--AGCCACT-CA-GAAGTATGGGGAAGAGCAGGC-CTATGCT-AATT-A--T-AC-T--A-TATA--CT-A-GTAT-ATTCCA-AC-AAGTGGGA-GT--TCG-------------------TGGCC-C------CTCAT--C--C---TT--GC--T-CA-T-----AGGGAAAT-C-GT-CT---GAA-TTGG-CT---ATT--ACAC------GTA--TA----AGCC-CG-AAGAGC-TAGA---TTCGA---AT-GCATTTT-AT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAATC----A-TTA--A-G-C---C--ATC-GTTCTTTCAT--AATATGAACAATTT--TC---ATGTCTG-AT-GAA--T-TCAG-AGG---------G----CTTTTGT----T-TCGGA--AAATTTT-----AGTCT--AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GA-GCATA-----T--G---ATTT-TTTG-TG-T-ACTA-GA-TT-ATG--AT-TTT-CGCT--------AGACAATT-TCTATTTAAT--AATTTGAGGT-GG-ATTC-GA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAA-TAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A--TAA-TT-CTT--CATATCA-C-TTA--GA-CAT--ATG-AC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG---T-AAAAGT-C-TG--AA-CTT--A-TTTTGAA-A-T------T--A--ATTC--AA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
Reference ( gi|4 ) : TATAGATT-GTTTTTTAA-CA------G-AA---TG--A---AACCA-TTT-------------G-AATCTCTTCTTTTTTCCA-GACGT---TTTA-TTGTAATGC----CTATCGAA--AGT-ACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-AAT-TT--ATG-TCATT--CCAAATAT----A-C---GAAA-CGA-TT-C--A---CA--------T-CTCA-CAC-------------T--GTA-----T-GAT---------CTCTTTT----GATCTGTT--T-----A-CTCAA--TA-CACTTTGTTTT---A-CACCTCATG-AGCCGCAAATCTCATCATCTCT-A-A-CTG-TCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-G-TATGTCCTAAAA--TGT-T-GG-A-TATAG-----AT--GA--AG-TA-GC--A-GTTTAAAGA-AT-AC-CAGG-AA-G---TC-CAGCAATTT-T-AA-CCA-CTAATA--AA-TAG-T-TC---GCA-AGGTTAA-AATA-ATT--GG-----AACTC-TTCA---AGT-TA-T--A--TT-GA-TATA-T---TC--AGCCACT-CA-AAAGTATGGGGAAGAACAGGC-CTATGCT-TATT-A--C-AC-T--A-TA-A--CT-A-GTAT-ATTCCA-AC-AAGTGGAA-GT--TCA-------------------TGGCC-C------AT-AT--C--C---TT--GC--T-CA-T-----AGGGAAAT-C-GT-CT---AAA-T-GG-CT---ATT--ACA-------GTA--TA----AGCC-CG-AAGAGC-TAGA---TTCGA---AT-GCATTTT-AT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAATC----A-TTA--A-G-C---A--ATC-GTTCTTTCAT--A-TATAAACAATTT--TC---ATGTCTG-AT-AAAATT-CCAG-AGG---------G----TTTTTGT----T-TCGGA--AACTTTT-----TGTCT--AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GA-TCATA-----T--G---ATTT-TTTG-TG-T-ACTA-CA-TT-ATA--AT-TTT-CGCT--------AGACAATT-TCTATTTAAT--AATTTGAGGT-GA-ATTT-GA-A-TGTT-CAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAA-TAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A--TAA-TT-CTT--CATATCA-C-TTA--GA-CAT--ATG-AC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG---T-GAAAGT-C-TG--AA-CTT--A-TTTTGAA-A-T------T--A--ATTT--AA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|3 : TATAGATTTGTTTTGTAA-CA------G-AAGGGTGG-A---AACCAATTT-------------GGAATCTCTTCTTTTT--CA-GACGTA--TTTA-TTGTAATG-----------------T-ACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-TTA------G-TT-TCAAATTTT-T-G-A-T-AA-T-TT-TAT-TTTAATG-TCATT--CCAAATAT----A-C---GAAAACGA-TT-C--A---CA--------TTCTAA-CAC-------------T--ATAATTA-T-GAT---------CTCTTT-----GATCTGTT--T-----AACTCAA--TA-AACTGTGTTTT---A-CACCTCATG-AGC-ACAA-TCTCATCTTCTCT-A-A-CTG-TCAGCAATGCGAAA-CTA------CATATGCCAT-GTTAT-G-TATGTTCTAAAA--TAT-T-GG-A-TATAG-----GT--GA--AGGTA-GC--A-GTTTAAGTA-A--AC-CGGG-AA-G---AC-CAGCAATTT---AA-C-A-CTAATATAAA-TAG-TGTC---GCA-AGGG-AT-AATA-ATT--GG-----AACTC-TTCA---AGT-TA-T--ATTTT-GA-TATA-TC--TC--AGTCACT-CAGGAAGTATGAG--AGAGCAGGC-CTATGC--AATT-A--T-AC-T--A-TATA--CT-A-GTAT-ATTTCC-AC-AAG-GGGA-GT--TCG-------------------TGGCC-C------CTCATC-C--C---TT--GC--TCCA-T-----AGGGAAAT-C-GT-CT---GAATT-GG-CT---ATTA-ACAAC-----GTA--TA----AGCC-CG-AAGAGCTTAGA---TTCGA---AT-GCATTTT-A---ACTAGCCAGGGGTTT--AAA--TG--CTGC-A--AGGGCTC----A------------------------CTTTCATA-A-TATGAACAATTT--TC---ATGTCTG-AT-GAA--T-TCAGAAGG---------G----CTTTTGT----T-TCGGAC-AATTTTA-----TGT-T--AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GA-ACATA-----TA-G---ATTT-TTTGTTGCT-ACTAGCA-TA-TTG--ATATTT-CGCT--------AGACAATT-TCTATTTAAT--AATTTGAGGTGGG-ATTC-GA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-TCC-TAAA-TAATAGA--AT-CT-GTTCGAAA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-C--TAA-TT-CTT--CATATCA-C-TTA--G--CAT--ATG-AC----A-C-A-ACAT-TT-GGCA-A-TA-TC-AA-ATAT-T-GTAA-CA-T-TGAA-AAA-A------TG---T-AAAAG--C-TG--AA-CTT--A-TTTTGAA-A--------T--A--AATC--AA--C--T-GACCCCGT-C-T-CTTCC-AGTACT--C-T---C--A-GTACTTTGATT
gi|6 : TATAGATT-GTTTT--AATCA------G-AA---GGT-G---AACCA-TT----------------AATCTCTTCTTTT--CAA-GAAGT---TTTA-TT-TAATG-----------------T-ACATCCT--GA-T-A-TCGGTACTTT-CAAATTAT-A------G-TT-TCAA-TTTTGT---A-T-AA-T-TTTAAT-TT--AT---CATT--CCAAATAT----A-C---GAAA-CG--TT-C--AAAACA--------T-CT-A-CAC-------------T--ATA-----T-AAT---------CTCTTT-----GATCT-TTAAT-----A-CTCAAAATA-AAC---GTTTT---AACACCTCATG-AGCCACAA-TCTCATCTTCTCT-A-AACT--TCAGCAATG---AA-CTA------CATATGC-ATAGT--T-G-TATGTTCTTAAA--TAT-T-GG-AATATAG-----GT---A--AG-TA-GC--A-GTTTTAAGA-AA-AC-CAGG-AA-A------CAGCAATTT-T-AA-CCA-CTAATA--AA-TAG-T--C---GCC-AGGATAA-A-TATATT--G------AACTC-T-CA---AGT--A----A--TT-TA-TAAA-T---TCTCA-TCGCT-CA-GAAGTATGAGGAAGAGCAGGC-CTATGCT-AATT-AATT-AC-T--A-TATA--CT-A-GTATTATTCCA-AC-AAGTGGA--GT--TCG-------------------TGGCC-C------CTCAT--C--C---CTTCGC--T-CA-T-----AGG-AAAT-C-GT-CT---GAA-T-GG-CT---ATT--ACAC------GTA--TA----AGCC--G-AAGAGC-TAGA---TTCGA---AT-GCATTTTTAT--ACTG--CAGGGGTTT-CAAA--TG--CTGC-A--AGGAATC----AATTA--A-GGC---C--ATC-TTTCTTTCAT--AATATGAACCAATT--TC---ATGTCTG-AT-GAA--T-TCAG-AGG---------G----CTTTTGT----T-TCGGACCAA--TTT-----AGTCT--AA---T-----------------GA-A-TTGC----CAAAGAT-AACACCTA-AA-ACATAA----T--G---ATTT-TTTG-T--T-ACTA-GA-TTTATG--AT-TTT-CGCT--------AGACAATT-TCTATTTAATT-AATTTGAGG--GG-ATTC-GA-A-T-TT-ACCT-GTA--ATCAT-T-A--AACATGCCT-AAAAATAA-A-A-TAT-CT-GTTCG-AAGA-C-TATATTCTAG------TA-C--------A----------A--------A---C-A--TAA-TTTCTT--CATATCA-C-TTA--GAACAT--ATG-AC----A-C-A-ACAT-TC--GC--A-TA-TCAAA-ATAT-T--TAA-CA-T-TG-A-AAA-AG-----TG---T-AAAATT-CATG--AA-C-T--A-TTTTG-A-A-T------T--A--ATTTC-AA--T--G-AACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|8 : TATAGATT-TGTTTTTAA-CA------G-AA---GG--ATGTAACCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCGAA--AGT-ACATCCTT-GA-T-A-TCGGTACTTT-CAAATC-T-A------G-TT-TCAAATTTTGG-G-A-T-AA-T-TT-TAT-TTT-ATG-TCATT--CCAAATAT----A-C---GAAA-AGA-TT-CA-A---CA--------T-CTGA-CAC-------------T--GTG-----T-GAT---------CTC-TTT----GATCTGTT--TA----A-CTCAA--TA-CACTTTGTTTT---A-CACCTCATA-AGTCGC-AATTTCATCATCTCT-T-A-CTG-TCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-G-TATGTCCTAAAA--TGT-T-GG-A-TATAG-----AT--GA--AG-TA-GC--A-GTTTTAAGATAT-G--CAGG-AA-G---TC-CAGCAATTC-T-AA-CCA-CTAATA--AA-TAG-T-TC---GCA-AGG-TAA-AATA-ATT--GG-----AACTC-TTCA---AGT-TA-T--AT-TT-GA-TATA-TC--TC--AGTCACT-CA-GAAGTATGGGGAAGAGCAGGC-CTATGCT-AATC-A--C-AC-T--C-TATG--CT-A-GTAT-ATTCCA-AC-AAGTGGAA-GT--TCATGTAGGGGAGGGTGCTGAGTGGCC-CCGAACGAT-GTTGC--CAGTTT--GC--TCCA-T-----TGGGAAATGC-GT-CT---GAA-T-GG-CCTAAATT---CAGCTCCCTGTA--TA----AGCCACGAAAGAG
gi|11 : aTATAG-CT-GTTTTT--A-CA------G-AAGGCTG--G---AACCA-TTTCTGAGCACACAACG-AA-ATCTTCTTTT---CA-GACGT---TTTAATTGTAA-GC----CTATAGGAGAAGTTACATCCTTAGA-T-AGTCGGTACTTT-CAAATT-TCAC-----A-TC-TCAAATTTTGG-G-A-T-AA-T-TT-ATT-TT---TACTCATT--CCAAATAT----ATC---GAAA-CGA-TT-C--AA--CA--------T-CTAAACAC-------------T--ATACT---T-GAT---------CTCTTTG----AATCTGTT--TTA---A-CTCAA--TA-AACTGTGGTTTCTAA-CCACTCATG-AGCCGCCAATCTCATC-TCTCT-AGA-CTG-TCAGCAATG--GAA-CTA------CATATGC-ATTGT-AT-G-TATGTTCTAAAA--TAT-T-GG-C-TATAG-----AT--GA--AG-TAGGC--A-G-GTAATGA-ACAAC-CAGG--A-G---TC-CAGCAATTT-TGAA-CCACCTAATA--AACTAG-T-TC---GCA-AGGTTAA-AATA-ATT---G-----AACTC-TTCA---AGTATA-T-----TT-GA-CATA-TATCTC--AGTCACT-CA-GACGTATGGGAAAGAGCAGGC-CTATGCT-AATT-A--T-AC-T--A-
gi|5 : aATAGATT-TGTTTTTAA-CA------G-AAGGGTG--GG--AACCA-TTT-------------G-AATCTCTTCTTT----CA-GACGT---TTTA-TTGTAATG-----------------T-ACATC-TT-GA-T-A-TCGTTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGTTG-A-A-AT-T-TT-ATT-TT--ATG-TCATT--CCAAATAT----A-C---GAAA-CGA-TT-C--AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTGTT----GATCTGTT--T-----AACTCAA--TA-AACT--GTTTT---A-CAT-TCATG-AGCCACAACTCTCATCTTCTCT-A-A-CTGGTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-G-TATGTTCTAAAA--ATT-T-GG-A-TATAG-----GT--GA--AG-TA-GC--A-GTTTAA-GA-AA-AA-CAGG-AA-G---AC-CAGCAATTT-T-AA-CCA-CTAATA--AA-TAG-T-TC---GCA-GGAT--A-AATA-ATT--GG-----AACTC-TTCAGT-AGT-TA-TT-A--TTTGA-TA-A-TC--TC--AGTCACT-CA-GAAGTATGAGGAAGAGCAGGC-CTATGCTATCTT-A--T-AC-T--A-TATA--CTTA-GTAT-ATTCCA-AC-AAGTGGGA-GT--TCA-------------------TGGCC-C------CTCAT--C--CC--TT--GC--T-CA-T-----AGGGAA-T-C-GT-CT---GAA-TTGG-CT---ATT--ACAC------GTA--TA----AGCC--G-AAG-GC-TAGA---TTCGA---ATTGCATTTT-AT--ACTG--CAGGGGTTT-CAAA--TG--CTGC-A--AGGAATC----AATTA--C-A-C---A---TC-GTTCTTTCAT--AATATGAACAATTT---C---GTGTCTG-A--ATGATT-C-AG-AGG---------G----CTTTTGT----T-TCGGA--CAATTTT-----AGTTTT-AA---T-----------------GA-A-TTGCA-A-TAA-GAT-AACAC-TA-GA-ACA-A-----T--G---ATTT-T--G--G-T-ACTA-GA-TT-ATG--AT-TTT-CGCT--------AGACAATT-TCTATTTAAT--AATTTGAGGT-GG-ATTTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT--AAA-TAA-AGA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---CAA--TAA-TT-CTT--CATATCA-C-TTA--GA-CAT--ATG-AC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATA--T-GTGA-CA---TG-A-AAA-A------TG---T--AACGT-C-TG--AA-CTT--ATTTTTGAA-A-T------T--A--ATTC--AA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|10 : ATAGATT-TGTTTTTAA-CA------G-AAGGGTG--G---AACCA-TTT-------------G-A-TCTCTTCTTTTTTC-A-GACGT---TTTA-T-GTAATG-----------------T-ACATCCTT-GAAT-A-TCGGTACTTTTCATAAT-T-A------G-TT-TCAAATTTTGT-GGA-T-AA-T-TT-TAT-TTT-ATG-TCATT--CCAAATAT----A-CTAAGAAA-CGAATT-C--AA--CA--------T-CTAA-CA--------------T--ATA-----T-GAT---------CTCTTT-----GATCTGTT--T-----AACTCAA--TA-AAACTGGTTTT---A-CACCTCATGGAGCCACAATCTTCATCTTCTCT-A-A-CTT-TCCACAATG--GAA-CTA------CATATGC-AT-GT-AT-GTTATGTTCTAAAA--TAT-T-GGAA-TATAG-----GT--G---AG-TA-GCA-A-GTTTTAAGA-TA-AC-CAGGAAA-G---AC-CAGCAATTT-T-AA-CCA-CTAATA--AA-TAG-T-TTGCGGCA-GGGATAACCATA-ATT--GG-----AACTC-TTC----AGT-TA-T--AT-TT-GA-TATA-TGC-TC--AGTCAGTCCA-GAAGTATGAGGAAGAGCAGGC-CTATGCT-AATT-A--T-AC-TTAA-T--A--CT-A-GTATAATTCCA-AC-AAGTGGGA-GT--TCT-------------------TGGCC-C------TTCATC-C--C---TT--GC--T-CA-T-----AGGGAAAT-C-GT-CT---GAA-T-
gi|7 : gTAGATT--TGTTTTAA-CA------G-AAGGTTG--A---AACCA-TTTTT-----------G-AATTTCTTCTTTT---CA-GACGT---TTTA-TTGTAATGC----CTATCGAA--AGT-A-ATCCTT--A-T-A-TCGGTACTTT----------------------TCAAATTTTGT-G-AAT-AA-T-TT-ATT-TT--ATG-TCATT--CCAAATAT----A-C---GAAAACGA-TT-C--AA--CA--------T-TCTA-CAC-------------T--GTAA----T-GAT---------CTCTTG-----GATCTGTT--T-----AACTCAA--TAACACTTTGTTTT---A-CACCTCATG-AGCCGTAA-TCTCATCATCTCT-T-A-ATG-TCAGCAATG--GAA-CTA------CATATAC-A--GT-AT-T-CATGTCC-AAAATTTGT-T-GG-A-TATAG-----AT--GA--AG-TA-GC--A-GTTTTAAGA-A--AC-CAGG-AA-G---T--CAGCAATTT-T-AA-CCA-CTAACT--AA-TAGTT-TC---GCA-AGGGTTA-AATA-ATT--GG-----AACTC-TTCA---A-T-TA-TTCT--TT-GATTATA-TC--TC--AGCCACT-CA-GAAGTAT-GGGAAGAG-AGGC-CTATGCT-ATTT-A--CAAC-T--A-TATA--CT-A-GTAT-ATTCCA-A--AAGTGGAA-GTTGTCA-------------------TGGCC-C------CTCAT--CT-C---TT--GC--T-CA-T-----AGGG-AAT-C-GT-CTCGGAAT-T-GGTTT---ATT--ACAC------GTA--TA----AG-C-CG-AAGAGC-TAGA---TTCGA---ATGGCATTGT-AT--ACTTG-CAGGGGTGTTCAAA--TG--CTGCAA--AGGAATCA---A-TTATCA-G-C------ATC-CTCTTTTCATAAA-TATGAA-AA-TT--TC---A-GTCTG-AT-GAA--T-TCAG-AGG---------G-----TTTTGT----T-TCGGA--AAATTTT-----AGTCT--AA---T-----------------GA-ATTTGCA-A-TAAAGAT-AACACCTA-Gtg
gi|1 : cTATATT-GTATTTTAA-CATTTAAAG-AG---TG--G---AACCA-TTT---------------AATCTCTTCTTT----CATGACGTGGGTGTG-T-GTGATGGGGGGCTGT--AA--GGTTACAATCCT-GA-T-A-TCG-TACTTT-CAAATT-T-A------G-TTATCAAATTTTGT-A-G-TCAA-T-TT-ATT-TC--ATG-TCACTATCCAA-TAT----AGC---GAAA-CGA-TT-CCAA---CA--------T-CTAA-CAC-------------T--ATA-----TTGAT----------TCTCTT----GATC-GCT--CCTCCAA-CTCAAC-TA-AACT--GTTTT---A-CACCTCATG-AGCCACAA-TCTCATCTTCTCTTA-A-CTG-TCAGCAATG---AA-CTAAGTTATCATATGC-AT-GT-ATTG-TATGTCCTAAAAA-TAA-TAGG-A-TATAA-----GA--GAGCAG-TA-GCCCACGTT--AAGATAA-AC-CAGG-AA-GACGTCGTAGCAAATTAT-AA-C-A-CTAATA--AA--AG-T-TC---TCACAGGATAA-AA---ATT---------AACTC-T-CA---ATT-TA-T--A--TT-GAATATA-C---TC--AGCTACT-CA-GAA-TATAGG-AAGACCCAGCACTATGCA-AGTTGA--T-AC-T--AGTA-ATACG-A-GCAT-ATTCCA-AC-AAGTGGGACGT--TCG-------------------TGCCCTC------AT--C--C--C---TT--GC----CA-T-----AGGAAAAT-CAGT-CT---GAA-TTAG-CT---ATTTTATATTCT---GTA--TA----TACA-T---AGAGCATAAAGATTTCGAC--AT-GCATTTT-ATTTACTG--CAAGGTTTTTCAA---TG--CTGT-ATAAGGAATTCCCAA-TTA--AAG-CTCTA--TTCTGTTCTTTCATTAA-TATGAACAATTTCATC---GCGTATG-A-----AT---CAG-AGG---------GC---TTTTTGT----T-TCGGA--CAATTAT-----AGTCTAAAA---T-----------------GACA-TTGCA-A-TAAAGATAAACACCTACGA-ACATATTTATT--GGTTATTTCTTTA-TG-T-AGT--CA------G--AT-TTC-CGCTTACTGCACAGATTATG-CTTATTTAATGAAGTTTGAGGT-GGCATTC-GA-A-TTTTACACTGGTAG-ATCATAT-ATTTACAT-CCTAAAAA-TCA-TTATTATCCT-G-TCA-AA-C-CATAT-TTCTAG------TA-C--------A----------A--------AATTC-A--TAA-TT-CTT--CATATCA-C-TTA--GA-CAT--ATG-AC----A-CAA-ACA--TT-GGC--ATTA-TC-AAGATAT-G-GAGA-AATT-TG-A-AAA-AAAG---T----T-AAAAGT-C-TGGAAG-CTT--A--TGTGAG-G-TAGTTTAT--A--ATTC--AA--TAGT-GACCCCGT-C-TGCT--C-AGTATC--G-T---C--A---ACTTT
gi|2 : TT-GTTTTTAAA-AA------GGAA---TAGAA---AACCA-TT--------------G-AATCTCTTTTTTT---CA-GACGT---TTTA-TTGTAATGC-----TATCGAA--AGT-ACATC-TT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TTAATTTTTGTTG-A-T-AAAT-TT-ATT-TTT-ATG-TC------CAAATTT----A-C---GAA--CGA-TT-C--AA--CA--------T-CTAA-CAC-------------T--GTAA----T-GAT---------CTCTTT-----GATCTGTT--T-----AACTCAA--T--CACTT-GTTTT---A-CACC--ATG-AGCCGCAA-TC-CATCATCTCT-A-A-CTG-TCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-G-TATGTCCTAAAA--TG--T-GG-A-TATAG-----AT--GA--AG-TA-GC--A-GTTT------------------------TT-AATCGA--T-T-AA-CGA-CGAACT--AA-TAGAT-TC---GC--AGGTTAA-AATA-ATTTCGAAATCTAACTA-TTCAGCCAGTGTA-T--A--TTCGATTATA-T---CT--AACC-CT-C
gi|16 : TTTTTAA-CA------G-AAAGATG--G---GACCA-TGT-------------G-AATCTCTTCTTTTTTC-A-GAAGT---TTTA-TTGTTTTAT----TTTTCGTA--AGT-ACATCCTT-GA-T-A-TCGGTACTTT-TAAATT-T-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATT-TT--ATG-TCATT--CCAAATATTATAA-C---GAAA-CGA-TT-C--AT--CA--------T-CTAA-CAC-------------T--ATACTGTTT-GGTACGTTAATACTCCTTTATATGATATCTT--T-----AACTCAA--TA--A----GTTTT---A-CACCTCATG-Attgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggatatcatggcccctcatcccttgtgtattgggaaaacgtgctgaattggctattacacgtataagcagaaagctagattcgaatgctttttatactgcaggggtttcaaatgctgcaaggaatcattaagccatcgttctttcatatatgaacaatttcatgtctgatgaattcagaggggcttttgtttcggaaaagtttagtctaatgaattgcacataagatacctagagcatatatgacttttgtgttactagaattataatttcgctagacatttctatttaataatttgaggtgggattcgatgtacatgtaatatcattaaacatacctaaaataaagaagactgttcgaaacattattctagtacaaacaattatcttcatatcactttagacaatgacacaacatttggcatatcaaatatatgtaacaatgaaaatgtaaagtctgacttattttgaaattaattcattgaccccgtctctcagtactctcagtactttgatttc
gi|14 : tg-TTGTAATGC----CTTTCGCA--AGT-ACATCCTT-GT-T-A-ACGGTACTTT-CAAATT-T-ACCGACAG-TC-ACAAATTTTGT-G-A-T-AA-TGTT-ATT-TT--ATG-CCATT--CCAAATAT----A-C---GAAA-CGA-TTTC--A---CACTATACAGT-TTGA-TACGTTAATACTCATTT--ATA-----T-GAT---------CTCTTT-----GGTCTGTT--T-----AACTCAA--TA-AACTTTGTTTT---A-CACCCCATG-AGCCGCAA-TATCATCATCTAT-G-A-CTG-TCAGCAATG--GAA-CTA------CATATA---------T-G-TGTGTTCTAAAA--TGT-T-GG-A-TATAGCAAATATAAGA--TG-TA-GC--A-GTTTTAAGA-TA-AC-CAGGGAA-G---TC-CAGCCATTT-T-AA-CCA-CTAATA--AA-TAG-T-TC---GCA-AGGTTAA-AAnnnnnnnnnnnnnnnnnnnnnnnnngaggggaagtaatttattttactgcattggcgctttttttgtcctatgaat
gi|25 : gAATGC----CTATCGCA--AGT-ACATCCTT-GA-T-A-TCAGTACTTT-CAAATT-C-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATT-TT--ATG-TCATT--CCAAATAT----A-C---GAAA-C
gi|26 : tatctactcttttttgcagaagtttttatgtnnnnnnnnnnnnnnnnnnnnnnnnnT-ACATCGCT-GA-CGA-TCGG-ACTTT-CAAATT-T-A------GTTT-TCACA-TTTGT-G-A--------TT-AATATT--ATG-TCATT--CCAAATAT----AGC---GAAA-CGA-TC-A--A---CAC-------T-CTAA-CAC-------------TTCATA-----T-GAT---------CTC-TTT----GATCTGTT--
gi|19 : gaatgaCTAT-G-A-CTG-TCAGCAATG--GAAACTA-----------------------G-T---TTCTAAAA--TGTCT-GA-A-T---G-----AT--GA--AG-TA-GC--A-GTTTTTAAG-AT-ACACATA-AA-G---TCTCAGCAAGTT-T-AAACCA-CTAGTA--A--TAG-T-TC---GCA-AGGGTAA-A-TA-AT---GG-----AACTCCTTTA---AGT-TAAT--A--TTTGA-TATA-TTC-TC--TGCC-CT-CA-GAGGTATGGGGAA-AGCAGGC-CTATGCT-AATT-A--T-ACTT--A-TATA--CT-AGGTAT-ATTCCAGAC-AAGTGGGA-GT--T
gi|36 : CTAT-G-A-CTG-TCAGCAATG--GAA-TTA---------------------------TGTTCTTAAA--TGT-T-GG-A-TATAG-----AT--GA--AG-GA-GC--A-GTTTTAAAA-a
gi|30 : cgAAGA-TA-AC-CAGG-AAAG---TT-CGGTAATTT-T-AA-CCA-CTAATA--AA-TAG-T-TC---GTA-AGGTTAA-AATA-ATT--GG-----AACTA-TTCA---AGT-TA-T--AT-TT-GA-TATATT---TC--AATCAt
gi|24 : A-G---TC-CAGCAATTT-T-AA-CCA-CTAGTA--AA-TAG-T-TC---GCA-AGGTTAA-AATA-ACT--GG-----AACTC-TTTA---AGT-TA-T--AT-TT-GA-TATA-TC--TC--TGCCCCT-CA-GAGGTATGGGGAAGAGCAGGC-CTATGCT-AATT-A--T-AC-T--A-TATA--CT-A-GTAT-ATTCCA-AC-AAGTGGGA-GT--TCA-------------------
gi|12 : CA-AGGTTAA-AATA-ATT--GG-----AACTC-TTCA---AGT-----------------AT--C---TC--AGCCACT-CA-GAAGTATGGGGAAGAAGAGGC-CTATACT-AATT-A--T-AC-T--A-TA-----T-A-A-AT-ATTCCA-AC-AAGTGGGA-GT--TCA-------------------TGGCC-C------CTCATC-C--C---TC--GC--T-TA-TAGGGAAGGGAAAT-C-AT-TT---GAATT-GG-CT---ATT--ACAC------ATA--TA----AG-C-CG-AAGAGC-TAGA----------------------AT--ACT-G-CAGGGG-CTTCAAA--TG--CTGC-A--GGGAATCA---A-TGA--A-G-C---C--ATT-GTTCTTTCATA-A-TATGAACCATTT--T----ATGTCTG-ATGAAAAT---CAG-AGG---------T----CGTTTGT----T-TCGGA--CAATTTTAGTCCTATCT--AAACCTCTTGGAAAA--------GA-A-TTGCA-A-TAAACAT-AACACCTA-TA-GCATA-----T--A---ATTT-TTCG-CG-T-ACTA-GA-TT-ACA--AT-TTT-CGCT--------AGACAATT-CCTATTTCAT--AATTTGAGGT-GA-ATTC-GA-A-TGTA-CACT-GTAG-ATCAT-T-C--AAC
gi|9 : T-A-GTAT-ATTCCA-ACCAAGTGGGA-GT--TCG-------------------TGGCC-C------TC-AT--CGCC---TT--GCATT-CA-C-----AGGGAAAT-G-CT-CT---GAA-T-TG-CT---ATT--ACAT------GTAAACA----AGCC----AAGAGC-TAGA---TTCGACGCAT-GCATT---AT--ACTG--CAGGGGTTT-CAAAAATGGCCTGC-A--AGGAACA----A-TTA--A-G-C---CCCATC-GTTCTTCTA------ATCGAAAATT----C---ATGTCTGGAT-GA---T-TCAG-AGG---------GCTCTTTTTTGT----TGTCGGACAAATTTTA-----AGTCT--AA---T-----------------GA-A-TTGCA-AATAAAG-T-AACACCTA-GAACCATA-----T--G---ATTC-TTTG-TG-T-ATAA-GA-T--ATG--AT-TT--CGCT--------AGACAATT-TCTATT-AAT--AATTTGAGGT-G--ATTC-GAGA-TTTA-CACT-GTAG-A-CAC-T-T--AACATCCCT-AAAA-TAA-AGA-GAT-CT-GTTCG-AA-A--ATAT-TTCTAG------TA-C--------A----------A--------A---C----TAATTT-CTT--AATATCA-CGTGA--GA-C-T--ATG-ACCACTA-C-A-ACATCTT-GGC--A-TA-TCAAA-ATA--T-GTAA-CA-T-TG-G-AAA-AAGATTTTA---A-AAAAGTCC-TG--AA-CTA--A-TATTG-A-A-T------T--AATATTT--CA--T--T-GACCCCGTACGT-CT--C-AGTACTTAC-T---CCGG-GTACTTTG
gi|2 : --TCA-------------------TGGCC-C------CTCAT--C--CC--TT--GT--G-TA-T-----TGGGAAAA-C-GTGCT---GAA-TTGG-CT---ATT--ACAC------GTA--TA----AGCA--G-AA-AGC-TAGA---TTCGA---AT-GCTTTTT-AT--ACTG--CAGGGGTTT-CAAA--TG--CTGC-A--AGGAATC----A-TTA--A-G-C---C--ATC-GTTCTTTCAT--A-TATGAACAATTT---C---ATGTCTG-AT-GAA--T-TCAG-AGG---------GG---CTTTTGT----T-TCGGA--AAAGTTT-----AGTCT--AA---T-----------------GA-A-TTGCACA-TAA-GAT-A---CCTA-GA-GCATA-----TATG---ACTT-TT-G-TG-TTACTA-GAATT-ATA--AT-TT--CGCT--------AGACA-TT-TCTATTTAAT--AATTTGAGGT-GGGATTC-GA---TGTA-CA-T-GTAATATCAT-T-A--AACATACCT-AAAA-TAA-AGA-AGA-CT-GTTCG-AA-A-CATTA-TTCTAG------TA-C--------A----------A--------A---C-AATTA---T-CTT--CATATCA-CTTTA--GA-CA---ATG-AC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATATAT-GTAA-CA-A-TG---AAA-A------TG---T--AAAGT-C-TG---A-CTT--A-TTTTGAA-A-T------T--A--ATTC---A--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTgat
gi|27 : ttgtttttaaaaaggaatagaaaaccattgaatctctttttttcagacgttttattgtaatgctatcgaaagtacatcttgatatcggtactttcaaatttagttttaatttttgttgataaatttatttttatgtccaaatttacgaacgattcaacatctaacactgtaatgatctctttgatctgtttaactcaatcacttgttttacaccatgagccgcaatccatcatctctaactgtcagcaatggaactacatatacatgtatgtatgtcctaaaatgtggatatagatgaagtagcagtttttaatcgattaacgacgaactaatagattcgcaggttaaaataatttcgaaatctaactattcagccagtgtatattcgattatatctaaccctcttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggata-C------AT-AT--C--C---TC--TC--T-CCCT-----NNNNNNNN-N-NN-NN---NNN-N-NN-NN---NNN--NCT-------GTA--TA----AGCC--G-AAGAGC-TAGA---TTCGA---AT-GCTTTTT-AT--ACT-G-TAGGGG-TTTCAAA--TG--CTGC-A--tc
gi|31 : tacttgcgagacactgacata--C---TT--GC--T-CA-T-----AGGGAAAT-C-AT-CT---GAA-TTGG-CA---ATT--ACAC------GTA--TACATAAGCC--G-AAGAGC-TAGA---TTCAA---AT-GCATTTT-AT--ACT-G-CAGGAG-CTTCAAA--TG--
gi|40 : A-T-----AGCGAAAT-C-AT-TT---GAA-TTGG-CT---ATT--AAAC------GTA--TA----AG-C-CG-AA
gi|13 : GAACC----AATTA--A-G-C---C--ATT-GTTCTTTCAT--AATATGAACCATTA---C---AAGGCTG-AT-GAA--T-TCGG-AGGCTAAGGACAA----TTCTAGTCTTAT-TC--A--AACCTCC-----TGGAA--AA---------------------GA-A-TTGCA-A-TAAACAT-AACTCCTA-GA-GCATA-----T--G---
gi|21 : TT-GTTCTTTCAT--AATATGAACCATCT---C---ATGTCTG-AT-GAA--T-TCAG-AGG---------G----CGTTTGT----T-TCGGA--CAATTTT-----AGTCT--TA---TTTAAACCTCTTGGAAAAGA-A-TTGCA-A-TAAACAT-AACATCTA-GA-GCATA-----T--A---ATTT-TGTG-TG-T-ACTA-TA-TT-ACA--AT-TTT-CGCT--------AGACAATT-CCTATTTCAT--AATTTGAGGT-GG-ATTC-GA-A-TATA-CACT-GTAG-ATCAT-T-C--AACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaataaaggggtctgtttgaaacacatttctagaactagtacaatgtattaaacataattcttcatatcacttagacatatggcacaacatttggcatatcaaatattgtaacgttgaaaatatgtaaaagtctgaacttttaattgaccccgtctctcagtactctcagtactttgat
gi|15 : ATGAACCATTT--CTTGAAAGGCTG-AT-GAATTTGCCA--AGG---------A----CAATTAT----T-C---A--AACCTCC-----TGGAA--AA---------------------GA-A-TTGCA-A-TAAACAT-AGCACCTA-GA-GCATA-----T--G---GTTT-TTTG-TG-T-ACTA-GA-TT-ATA--GT-TTTTCACT--------AGACAATT-CCTATTTCCC--AATTTGAGGT-GG-ATTC-GA-A-TGTA-CACT-GTTG-ATCAT-TCA--AAC-T-TCT-AAAA-TAA-AGA-GGT-CT-GTTTG-AA-A-CATAT-TTCTAG------TA-CAGTGTATTA----------A--------A---C-A--TAA-TT-CTT--CATATCA-C-TTA--GA-C------G-AC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-G-AA-C--------------------------------------------TT--A-TTTTGAA-A-T------T--A--ATTC--AA--T--T-TACCCCGT-C-T-CT--C-AGTACT--A-----C--A-GTACTTTGATT
gi|17 : AT-AACACCTA-GA-GGATA-----T--G---ATTT-TTTT-TG-T-ACTA--A-TT-ATATAAT-TTT-CGCT--------A-ACAATTCTCTATTTAAT--AATTTGAGGT-GG-ATTC-GA-AGTGTAACAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAA-TAA--GA-GAT-CTTGTTCG-AA-AACATAT-TTCTAG------TAAC--------A----------A--------A---C-A--TAA-TT-CTT--CATATCA-C-TTA--GA-CAT--ATG-AC----A-C-A-ACAT-TT-GGCGGA-TA-TC-AA-ATAT-T--TAA-CA-T-TG-A-AAA-A------TG---T-AAAAGT-C-TG--AA-CTT--ATTTTTGAA-A-T------T--A--ATTC--AA--T--T-GACCCCGT-C-T-TT--C-AGTACT--C-T---C--A-GTACTTTGATt
gi|20 : -TCTATTTAAT--AATTTGTGGT-GG-ATTC-GA-A-TCTA-CACA-GTAG-ATCAT-T-A--AA------------------GA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A--TAA-TT-CTT--CATAACA-C-TTA--GA-CAT--ATG-AC----A-C-A-ACAT-TT-AGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG---T-AAAAGT-C-TG--AA-CTT--A-TTTTGAA-A-T------T--A--ATTC--AA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|13 : AAA-TAA-AGG-GGT-CT-GTTTG-AA-A-CACAT-TTCTAGAACTAGTA-C--------A----------ATGTATTAAA---C-A--TAA-TT-CTT--CATATCA-C-TTA--GA-CAT--ATG-GC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CG-T-TG-A-AAATA------TG---T-AAAAGT-C-TG--AA-CT-----------------------------TTT--AA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGAT
gi|29 : gaaccaattaagccattgttctttcataatatgaaccattacaaggctgatgaattcggaggctaaggacaattctagtcttattcaaacctcctggaaaagaattgcaataaacataactcctagagcatatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttt-TAA-AGA-GGT-AT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------ACTGTTTTA--A--------A---C-A--TAA-TT-CTT--CATATCA-C-TTA--GA-CAT--ATG-AC----A-C-A-GTAT-TT-GGC--A-TA-TC-
gi|23 : ctacccagtttgcatAT-CT-GTTCG-AA-A-CAT-T-TTCTAT------TA-C--------A----------A--------A---C-AA-TAA-TT-C-----ATATCAGC-TTGAGGA-CAA--ATG-AC----A-C-AGACAT-TTTGGC--A-TAATC-AA-ATAT-C-GTA--CA-T-TG-A-AAA-A------TG---T-AAAAGT-C-TG--AA-CCTTAA-TTTTGAA-ATT------T--A--ATTC--AACTT--T-GACCCCGT-C-T-CT--CAAGTACT----T---C--ATGTACT
gi|22 : aagcaatG-AA-A-CATAT-TTCTAG------TA-C--------AGTGTATTAAAA--------A---A-A--TAA-TT-CTT--CATATCA-C-TTA--GA-TTC--ATG-AC----A-C-A-AAAT-TT-GGC--A-TA-TT-AA-ATAT-T-GCAA-CA-T-TG-T-AAA-A------TA---T-AAAAGT-C-TG--AA-CTT--A-TTTTAAA-A-T------T--A--ATTT--AA--T--T-GACCTCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATgat
gi|28 : atgtcattgttataccaaaagaaggaagggaagaagatAT-TTTTAAATT---TA-T--------G----------G--------G---C-A--TAA-TT-CTTTTCATA-CA-C-GTA--GA--ATTCATG-AC----A-C-A-CCAG-TT-TGC--A-TA-TC-AA-ATATAT-GTAA-CA-T-TG-GTAAA-A------TG---TAAAAAGT-C-TG--AACCTT--A-TTTTGAACA-T------T--
gi|18 : TT--CATATCAAC-TTA--GA-C-C--ATGGAC----AAC-ATACAT-TT-GAC--A-TA-TT-CA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TGTTAT-TAAAGT-C-TG--AC-ATT--C-TTTTG-C-A-T------TAAA--ATTTAAAA--T--G-GAACCCGT-C-T-TC--C-GGCGGT--C-TTTCC--G-GTACTTTG
gi|37 : ccggaaaaataaggtttacatgcacgtgcctacatT--CATATCA-C-TTA--GA-CAC--ATG-AC----A-CAA-ACAT-TT-GAC--A-TA-TC-AC-ATA----GTAATCG-TATG-G-AAG-G------TG---gaatttgtagttgaaccaagctcaacgtaatccatataatccattggagacgcaagcacctcaat
gi|33 : TA--GA-CCC--ATG-AC----A---A-ACAT-TT-G-C--A-TA-TC-AA-ATAT-TTATAAACA-T-GC-G-AAA-A------TG---T-AAAAGT-C-TG--TA-ATC--A-TTTTTAA-A-T------T--A--AGTT--AA--T--T-GACCC
gi|35 : -ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG---T-AATAGT-C-T----------------T--A-A-T------T--A--CTTT--AA--T--T-GACCATGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTG
gi|38 : TT--A-TTGTGAA---T------T--A--ATTC--AA--T--TAGACCCCGT-C-T--T--C-AGTACT--CTT---C--A-GTACTTTG
gi|41 : --T--T-GAACCCGTTC-T-CT--C-AGTACTT-C-T---C--A-GTACTTTGATT
gi|42 : --T-GACCCCGT-C-T-CT--C-AGCACT--C-T---C--A-GTACTTAGA
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|32 ): AATAAATAATCATCTAATCTGTTTTTTTTGGTTTAATGTAAGCTATCGCAAGACGTTATCTCGGCCTACGGTATTCAAATTTACTTTATTCTTGT
Unaligned ( gi|34 ): TGTTAACTTACCATGTATAGTTCTTTCTGGTGCACACACCTCAATTGTTTGATTTCCAGAATCGTTTATCACACAATGATATTTAAT
Unaligned ( gi|39 ): TTTTATCATTGTAAGCGTGCGATGAAATTGACGAATTATTTTGT
Alignments
lowQualScore : 222 222222222222222 111 111 44444444444444444444 111111 1 11111111 1111111111111 22222 111111111 22222 1111 111111 2222222222222222222 22222222222 1 111 222 1 2222 1111111111111 1111111 11111 5555555555555555555555555555555555555555 11111111 1 111111 2222222222222222222222222222 111111
lowQualScore : 66 3 666 222 3 3 88 3 555555555555555 777 3 000 3 88888888888888888888 2 2 2 2 2 2 5 111111 2 2 5 2 2 2 2 8 1 5 2 33 6666 8 555 5 3 3 444 44444444 3 3 6666666666666 44 44444 3 222222222 22222 0000 44 77 3 88 555 3 3 3 7 3 4 444 3 3 44 3 888888 0 3 66 3 3 3 77 3 3 6 555 6666 44 3 3 44 6 0 2 2 888 3 5 000000 2 2 2 2 33 2 5 2 66666 3 5 33 77777 2 888 2 8 2 33 5 8 0 3 3 3 3 3 44 3 3 3 3 3 3 3 3 3 3 3 44 5555555555555555555 666 77777777777 8888 77777 3 3 3 44 3 555 77 7777 3 555 6666 44 3 55 3 7 666 000 3 3 3 55 333 3 4 55 55 4 55 4444 4 5555555555555 55 7 1 5 0000000 0 6 3 44 555 3 3 7777 3 3 88 6 11111 5555555555555555555555555555555555555555 3 3 3 3 3 3 77 3 88888 3 3 7 3 444 777777 3 33333333 3 3 44 6 3 3 3 6 1 3 3 3 3 5555 2 88 3 77 3 3 2 2 2 2 222222 2 4444444444444444444444444444 444 444 5 33 33 4 4 33 2 33333 4444 2 4 4 2 2 55 2 2 2 2 6 2 4 2 2 444 2 222222 2 4444 2 2 33 2 33 4 4444 2 888888888 666 33 22 2 4 2 2 33 2 55 2 333 33 2
lowQualScore : .. . ... ... . . .. . ............... ... . ... . .................... . . . . . . . ...... . . . . . . . . . . . .. .... . ... . . . ... ........ . . ............. .. ..... . ......... ..... .... .. .. . .. ... . . . . . . ... . . .. . ...... . . .. . . . .. . . . ... .... .. . . .. . . . . ... . . ...... . . . . .. . . . ..... . . .. ..... . ... . . . .. . . . . . . . . .. . . . . . . . . . . . .. ................... ... ........... .... ..... . . . .. . ... .. .... . ... .... .. . .. . . ... ... . . . .. ... . . .. .. . .. .... . ............. .. . . . ....... . . . .. ... . . .... . . .. . ..... ........................................ . . . . . . .. . ..... . . . . ... ...... . ........ . . .. . . . . . . . . . . .... . .. . .. . . . . . . ...... . ............................ ... ... . .. .. . . .. . ..... .... . . . . . .. . . . . . . . . . ... . ...... . .... . . .. . .. . .... . ......... ... .. .. . . . . .. . .. . ... .. .
lowQualScore : 55 6 444 333 6 6 66 6 555555555555555 999 6 000 3 44444444444444444444 9 9 9 9 9 9 7 111111 9 9 7 9 9 9 9 6 4 7 9 99 1111 6 000 7 1 1 888 22222222 1 1 9999999999999 22 66666 1 333333333 00000 4444 66 99 3 88 888 3 3 6 3 6 5 666 1 1 22 1 888888 7 1 55 1 1 1 33 1 1 2 444 5555 22 1 1 22 2 4 9 9 999 1 7 888888 9 9 9 9 99 9 7 9 55555 6 3 99 11111 9 999 9 6 9 99 7 6 8 1 3 3 3 3 66 3 3 3 6 3 3 3 3 3 3 3 22 8888888888888888888 444 33333333333 3333 77777 1 1 1 22 3 888 99 1111 3 444 5555 22 1 88 1 3 444 000 6 6 6 00 777 3 4 00 00 0 55 5555 0 0000000000000 00 3 0 4 5555555 7 7 3 66 888 3 3 1111 3 3 33 7 77777 8888888888888888888888888888888888888888 3 3 3 3 1 1 99 3 33333 3 6 3 6 999 777777 6 22222222 3 3 66 7 3 3 3 7 0 3 3 3 3 1111 0 99 3 22 1 1 9 9 9 7 333333 7 7777777777777777777777777777 777 555 3 77 22 7 7 11 2 55555 7777 2 4 4 2 2 33 2 2 2 2 7 2 4 2 2 333 2 555555 2 6666 4 4 22 4 11 4 7777 2 111111111 555 11 99 1 4 2 2 11 2 33 2 999 11 2
consensus : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA-GA-N-AACCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTA-T-ATTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCC---TCATC---C--C---TTGC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAATCA---A-TTA--A-G---C-C--ATC--GTTCTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TT---CAG-A-GGGCT----TTT-GTT-TCGGA-CAATTTTA-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
Reference ( family-2307 ) : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA-GA-A-AACCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTA-T-ATTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCC---TCAT----C--C---TTGC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAATC----A-TTA--A-G---C-C--ATC--GTTCTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TT---CAG-A-GGGCT----TTT-GTT-TCGGA-AAATTTTA-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|1 : TATATT-GTATTTTAA-CATTTAAAGAG-T-GG-AA--CCA-TTT---------------AATCTCTTCTTT----CATGACGTGGGTGTG-T-GTGATGGGGGGCTGT---AA-GGT--TACAATCCT-GA-T-A-TCG-TACTTT-CAAATT-T-A------G-TTATCAAATTTTGT-A-G-TCAA-T-TT-ATTTC-A-TGTCACTATCCAA-TAT----AGC---GAAA-CGA-TTCCAA--CA--------T-CTAA-CAC-------------T--ATA-----TTGAT----------TCTCTT----GATC-GCTCCTCCAA--CTCAAC-TAA-ACT--GTTTT---A-CACCTCATG-AGCCAC-AA-TCT-CATCTTCTCTTA-A-CT-GTCAGCAATG---AA-CTAAGTTATCATATGC-AT-GT-ATTGT-ATGTCCTAAAAA-TAA-TAGGA-TATAA---GA----GAGCA-GTAG-CCCACGTT---AA-GATA-AACCA-GGAA-GACGTCGTAGCAAATTAT-AA-C-AC-TA--ATAAA--AG-T-TCTC---ACAGGATAAA-A--ATT---------AACTC-T-CA---ATT-TA-TA-TTGA--A-TATA--CTCAGCTACTC-A-GAA-TATAGG-AAGACCCAGCACTATGCAA-GTTGA--T-AC-TAGTAATAC-GA-GCA-T-ATTCCA-AC-AAGTGGGACGT--TC-------------------GTG--CCC---TCAT----C--CC--TTGC----CAT-----AGGAAAAT-CAGT-CT--GAATTAG-CTA---TTTTA----T-ATTCTGT----A--TATACA-T---AGAGCATAAAGATTTCGAC--A-T-GCA-TTTTATTTACTG--CAAGGTTTTTCAA---TG--CTGT-ATAAGGAATTCCCAA-TTA--A-AGCTC-T--ATTCTGTTCTTTCATTAATATGAACAATTTCATC---GCGT----ATG-AA--T----CAG-A-GGGCT----TTTTGTT-TCGGA-CAATTATA-G-----TCTAA---------------AA---T-----------------GACA-TTGCA-A-TAAAGATAAACACCTACGAAC--AT-ATTTATT-GGTTATTTC-TT-TATGTAG---TCA---G--AT-TTCCGCTTACTGCACAGATTATG-CTTATTTAA-TGAAGTTTGAGGT-GGCA-TTCGA-ATTTTA-CACTGGTAG-ATCATAT-ATTTACAT-CCTAAAAATCA-TTATTATCCT-G-TCA-AA-C-CATAT-TTCTAG------TA-C--------A----------A--------AATTC-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-CAA-ACA--TT-GGC--ATTA-TC-AAGATAT-G-GAGA-AATT-TG-A-AAA-AAAG---T--T-A--AAAGT-C-TGGAAG-CTT--A--TGTG----AG-G--TAGTTTATAA---TTCAA--TAGT-GACCCCGT-C-TGCT--C-AGTATC--G-T---C--A---ACTTT
gi|10 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GG-AA--CCA-TTT-------------G-A-TCTCTTCTTTTTT-CA-GACGT---TTTA-T-GTAATG--------------------TACATCCTT-GAAT-A-TCGGTACTTTTCATAAT-T-A------G-TT-TCAAATTTTGT-GGA-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-CTAAGAAA-CGAATTC-AA--CA--------T-CTAA-CA--------------T--ATA-----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAA-AACTGGTTTT---A-CACCTCATGGAGCCAC-AA-TCTTCATCTTCTCT-A-A-CT-TTCCACAATG--GAA-CTA------CATATGC-AT-GT-AT-GTTATGTTCTAAAA--TAT-T-GGAATATAG---GT----GA----GTAG-C--AAGTTTT-AA-GA-T-AACCA-GGAAAG---AC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TTGCGGCA-GGGATAACCATAATT--GG-----AACTC-TTCA----GT-TA-TA-TTTG--A-TATATGCTCAGTCAGTCCA-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TT-AA-TAC-TA-GTA-TAATTCCA-AC-AAGTGGGA-GT--TC-------------------TTGGCCCT---TCATC---C--C---TTGC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTG
gi|11 : gTATAG-CT-GTTTTT--A-CA---GAAG-GCT-GG-AA--CCA-TTTCTGAGCACACAACG-AA-ATCTTCTTTT---CA-GACGT---TTTAATTGTAA-GC----CTATAG-GA-GAAGTTACATCCTTAGA-T-AGTCGGTACTTT-CAAATT-TCAC-----A-TC-TCAAATTTTGG-G-A-T-AA-T-TT-ATTTTTA-C-TCATT--CCAAATAT----ATC---GAAA-CGA-TTC-AA--CA--------T-CTAAACAC-------------T--ATACT---T-GAT---------CTCTTTG----AATCTGTTTT---AA--CTCAA--TAA-ACTGTGGTTTCTAA-CCACTCATG-AGCCGCCAA-TCT-CATC-TCTCT-AGA-CT-GTCAGCAATG--GAA-CTA------CATATGC-ATTGT-AT-GT-ATGTTCTAAAA--TAT-T-GGC-TATAG---AT----GA--A-GTAGGC--A-GGT---AATGA-ACAACCA-GGA--G---TC-CAGCAATTT-TGAA-CCACCTA--ATAAACTAG-T-TCGC---A-AGGTTAAA-ATAATT---G-----AACTC-TTCA---AG--TA-TA-TTTGACA-TATAT-CTCAGTCACTC-A-GACGTATGGGAAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-
gi|12 : aC---A-AGGTTAAA-ATAATT--GG-----AACTC-TTCA---AGT------------------AT-CTCAGCCACTC-A-GAAGTATGGGGAAGAAGAGGC-CTATACTA-ATT-A--T-AC-TA-TA-TA---A---A-T-ATTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCC---TCATC---C--C---TCGC--T-TATAGGGAAGGGAAAT-C-AT-TT--GAATTGG-CTA---TT--A----C-AC---AT----A--TAAG-C-CG-AAGAGC-TAGA-----------------------AT--ACT-G-CAGGGG-CTTCAAA--TG--CTGC-A--GGGAATCA---A-TGA--A-G---C-C--ATT--GTTCTTTCAT-AATATGAACCATTT--T----ATGTCTG-ATGAAA--AT---CAG-A-GGTCG----TTT-GTT-TCGGA-CAATTTTA-GTCCTATCT-----------------AAACCTCTTGGAAAA--------GA-A-TTGCA-A-TAAACAT-AACACCTA-TAGC--AT-A-----T-AATTTTTCG-CG-TAC-TAG-A-TTA-C-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GA-A-TTCGA-A-TGTA-CACT-GTAG-ATCAT-T-C--AAC
gi|13 : GAACC----AATTA--A-G---C-C--ATT--GTTCTTTCAT-AATATGAACCA-TT--AC---AAGGCTG-ATG-AA--TT---CGG-A-G------------GCT-AAGGA-CAATTCTA-G-----TCTTATTCAAACCTCCTGGAAA---A-----------------GA-A-TTGCA-A-TAAACAT-AACTCCTA-GAGC--AT-A-----T-G
gi|13 : AAATAA-AGG-GGT-CT-GTTTG-AA-A-CACAT-TTCTAGAACTAGTA-C--------A----------ATGTATTAAA---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGGC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CG-T-TG-A-AAATA------TG-T-A--AAAGT-C-TG--AA-CT---------------------------------TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaataaaggggtctgtttgaaacacatttctagaactagtacaatgtattaaacataattcttcatatcacttagacatatggcacaacatttggcatatcaaatattgtaacgttgaaaatatgtaaaagtctgaacttttaattgaccccgtctctcagtactctcagtactttgat
gi|14 : gaaccaattaagccattgttctttcataatatgaaccattacaaggctgatgaattcggaggctaaggacaattctagtcttattcaaacctcctggaaaagaattgcaataaacataactcctagagcatatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttt-TTGTAATGC----CTTTCGCAA-G----TACATCCTT-GT-T-A-ACGGTACTTT-CAAATT-T-ACCGACAG-TC-ACAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGCCATT--CCAAATAT----A-C---GAAA-CGA-TTT-CA--CACTATACAGT-TTGA-TACGTTAATACTCATTT--ATA-----T-GAT---------CTC-TTT----GGTCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCCCATG-AGCCGC-AA-TAT-CATCATCTAT-G-A-CT-GTCAGCAATG--GAA-CTA------CATA--------T-AT-GT-GTGTTCTAAAA--TGT-T-GGA-TATAGCAAATATAAGA--T-GTAG-C--A-GTTTT-AA-GA-T-AACCAGGGAA-G---TC-CAGCCATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-A
gi|15 : gATGAACCATTT--CTTGAAAGGCTG-ATG-AA--TTTGCCA--A-GGACA----ATT-ATT-C-----AAACCTC---------CTGGA--------------AA---A-----------------GA-A-TTGCA-A-TAAACAT-AGCACCTA-GAGC--AT-A-----T-GGTTTTTTG-TG-TAC-TAG-A-TTA-TAG--TT-TTTCACT--------AGACAATT-CCTATTTCC-C--AATTTGAGGT-GG-A-TTCGA-A-TGTA-CACT-GTTG-ATCAT-TCA--AAC-T-TCT-AAAATAA-AGA-GGT-CT-GTTTG-AA-A-CATAT-TTCTAG------TA-CAGTGTATTA----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-------GAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT---------------------------------------------TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-TACCCCGT-C-T-CT--C-AGTACT--A-----C--A-GTACTTTGATT
gi|16 : TTTTTAA-CA---GAAA-GAT-GG-GA--CCA-TGT-------------G-AATCTCTTCTTTTTT-CA-GAAGT---TTTA-TTGTTTTAT----TTTTCGTAA-G----TACATCCTT-GA-T-A-TCGGTACTTT-TAAATT-T-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATATTATAA-C---GAAA-CGA-TTC-AT--CA--------T-CTAA-CAC-------------T--ATACTGTTT-GGTACGTTAATACTCCTTTATATGATATCTTT----AA--CTCAA--TAA------GTTTT---A-CACCTCATG-At
gi|17 : tgAT-AACACCTA-GAGG--AT-A-----T-GATTTTTTT-TG-TAC-TA--A-TTA-T-ATAAT-TTTCGCT--------A-ACAATTCTCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-AGTGTAACAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA--GA-GAT-CTTGTTCG-AA-AACATAT-TTCTAG------TAAC--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGCGGA-TA-TC-AA-ATAT-T--TAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-TT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnngaggggaagtaatttattttactgcattggcgctttttttgtcctatgaat
gi|18 : TT--CATATCAAC-TTA--G-ACCAT--G-GAC----AAC-ATACAT-TT-GAC--A-TA-TT-CA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TGTT-ATTAAAGT-C-TG--AC-ATT--C-TTTTGCATTAA-AATT------TAA------AA--T--G-GAACCCGT-C-T-TC--C-GGCGGT--C-TTTCC--G-GTACTTTG
gi|19 : ccggaaaaataaggtttacatgcacgtgcctacatCTAT-G-A-CT-GTCAGCAATG--GAAACTA-----------------------GT----TTCTAAAA--TGTCT-GAA-T---G---AT----GA--A-GTAG-C--A-GTTTTTAA-GA-T-ACACA-TAAA-G---TCTCAGCAAGTT-T-AAACCAC-TA--GTAA--TAG-T-TCGC---A-AGGGTAAA--TAAT---GG-----AACTCCTTTA---AGT-TAATA-TTTG--A-TATATTCTCTGCC-CTC-A-GAGGTATGGGGAA-AGCAGGC-CTATGCTA-ATT-A--T-ACTTA-TA-TAC-TAGGTA-T-ATTCCAGAC-AAGTGGGA-GT--Tgaatttgtagttgaaccaagctcaacgtaatccatataatccattggagacgcaagcacctcaat
gi|2 : TT-GTTTTTAAA-AA---GGAA---T-AG-AAAACCA-TT--------------G-AATCTCTT-TTTTT--CA-GACGT---TTTA-TTGTAATGC-----TATCG-AAAG----TACATC-TT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TTAATTTTTGTTG-A-T-AAAT-TT-ATTTTTA-TGTC------CAAATTT----A-C---GAA--CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--GTAA----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TCA---CTTGTTTT---A-CACC--ATG-AGCCGC-AA-TC--CATCATCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TG--T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-------T-AATC---GA-----------------T-T-AA-CGAC-GA--ACTAA-TAGAT-TCGC-----AGGTTAAA-ATAATTTCGAAATCTAACTA-TTCAGCCAGTGTA-TA-TTCG--ATTATAT-CT-AACC-CTC-a
gi|2 : --TC-------------------ATGGCCCC---TCAT----C--CC--TTGT--G-TAT-----TGGGAAAA-C-GTGCT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCA--G-AA-AGC-TAGA---TTCGA---A-T-GCT-TTTTAT--ACTG--CAGGGGTTT-CAAA--TG--CTGC-A--AGGAATC----A-TTA--A-G---C-C--ATC--GTTCTTTCAT-A-TATGAACAATTT---C---ATGTCTG-ATG-AA--TT---CAG-AGGGGCT----TTT-GTT-TCGGA-AAAGTTTA-G-----TCT-----------------AA---T-----------------GA-A-TTGCACA-T-AAGAT----ACCTA-GAGCATAT-A-----T-GA-CTTTTG-TGTTAC-TAGAA-TTA-T-A--A--TTTCGCT--------AGAC-ATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCG--A-TGTA-CA-T-GTAATATCAT-T-A--AACATACCT-AAAATAA-AGA-AGA-CT-GTTCG-AA-A-CATTA-TTCTAG------TA-C--------A----------A--------A---C----AA-TTATCTT--CATATCA-CTTTA--G-AC-A---ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATATAT-GTAA-CA-A-TG---AAA-A------TG-T----AAAGT-C-TG---A-CTT--A-TTTTG----AA-A--T------TAA---TTC-A--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggatatcatggcccctcatcccttgtgtattgggaaaacgtgctgaattggctattacacgtataagcagaaagctagattcgaatgctttttatactgcaggggtttcaaatgctgcaaggaatcattaagccatcgttctttcatatatgaacaatttcatgtctgatgaattcagaggggcttttgtttcggaaaagtttagtctaatgaattgcacataagatacctagagcatatatgacttttgtgttactagaattataatttcgctagacatttctatttaataatttgaggtgggattcgatgtacatgtaatatcattaaacatacctaaaataaagaagactgttcgaaacattattctagtacaaacaattatcttcatatcactttagacaatgacacaacatttggcatatcaaatatatgtaacaatgaaaatgtaaagtctgacttattttgaaattaattcattgaccccgtctctcagtactctcagtactttgatttc
gi|20 : ttgtttttaaaaaggaatagaaaaccattgaatctctttttttcagacgttttattgtaatgctatcgaaagtacatcttgatatcggtactttcaaatttagttttaatttttgttgataaatttatttttatgtccaaatttacgaacgattcaacatctaacactgtaatgatctctttgatctgtttaactcaatcacttgttttacaccatgagccgcaatccatcatctctaactgtcagcaatggaactacatatacatgtatgtatgtcctaaaatgtggatatagatgaagtagcagtttttaatcgattaacgacgaactaatagattcgcaggttaaaataatttcgaaatctaactattcagccagtgtatattcgattatatctaaccctcttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggata-TCTATTTAA-T--AATTTGTGGT-GG-A-TTCGA-A-TCTA-CACA-GTAG-ATCAT-T-A--AA-----------------GA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATAACA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-AGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTtc
gi|21 : TT--GTTCTTTCAT-AATATGAACCATCT---C---ATGTCTG-ATG-AA--TT---CAG-A-GGGCG----TTT-GTT-TCGGA-CAATTTTA-G-----TCT-----------------TA---TTTAAACCTCTTGGAAAAGA-A-TTGCA-A-TAAACAT-AACATCTA-GAGC--AT-A-----T-AATTTTGTG-TG-TAC-TAT-A-TTA-C-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GG-A-TTCGA-A-TATA-CACT-GTAG-ATCAT-T-C--AAC
gi|22 : G-AA-A-CATAT-TTCTAG------TA-C--------AGTGTATTAAAA--------A---A-A-TAA-T--TCTT--CATATCA-C-TTA--G-AT-TC--ATGAC----A-C-A-AAAT-TT-GGC--A-TA-TT-AA-ATAT-T-GCAA-CA-T-TG-T-AAA-A------TA-T-A--AAAGT-C-TG--AA-CTT--A-TTTTA----AA-A--T------TAA---TTTAA--T--T-GACCTCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGAT
gi|23 : atgtcattgttataccaaaagaaggaagggaagaagatAT-CT-GTTCG-AA-A-CAT-T-TTCTAT------TA-C--------A----------A--------A---C-AATAA-T--TC-----ATATCAGC-TTGAGG-AC-AA--ATGAC----A-C-AGACAT-TTTGGC--A-TAATC-AA-ATAT-C-GTA--CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CCTTAA-TTTTG----AA-AT-T------TAA---TTCAACTT--T-GACCCCGT-C-T-CT--CAAGTACT----T---C--ATGTACT
gi|24 : aagcaatA-G---TC-CAGCAATTT-T-AA-CCAC-TA--GTAAA-TAG-T-TCGC---A-AGGTTAAA-ATAACT--GG-----AACTC-TTTA---AGT-TA-TA-TTTG--A-TATAT-CTCTGCCCCTC-A-GAGGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTA-T-ATTCCA-AC-AAGTGGGA-GT--TC-------------------gat
gi|25 : AATGC----CTATCGCAA-G----TACATCCTT-GA-T-A-TCAGTACTTT-CAAATT-C-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-Ca
gi|26 : tatctactcttttttgcagaagtttttatgtnnnnnnnnnnnnnnnnnnnnnnnnn----TACATCGCT-GA-CGA-TCGG-ACTTT-CAAATT-T-A------GTTT-TCACA-TTTGT-G------A-T-TA-ATATT-A-TGTCATT--CCAAATAT----AGC---GAAA-CGA--TC-AA--CAC-------T-CTAA-CAC-------------TTCATA-----T-GAT---------CTC-TTT----GATCTGTT
gi|27 : gaatga---GT----A--TAAGCC--G-AAGAGC-TAGA---TTCGA---A-T-GCT-TTTTAT--ACT-G-TAGGGG-TTTCAAA--TG--CTGC-A--
gi|28 : tacttgcgagacactgacatacatatcctctctccctnnnnnnnnnnnnnnnnnnnnnnnnnctAT-TTTTAAATT---TA-T--------G----------G--------G---C-A-TAA-T--TCTTTTCATA-CA-C-GTA--G-A--ATTCATGAC----A-C-A-CCAG-TT-TGC--A-TA-TC-AA-ATATAT-GTAA-CA-T-TG-GTAAA-A------TG-TAA--AAAGT-C-TG--AACCTT--A-TTTTG----AACA--T------T
gi|29 : TAA-AGA-GGT-AT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------ACTGTTTTA--A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-GTAT-TT-GGC--A-TA-TC-
gi|3 : ctacccagtttgcatTATAGATTTGTTTTGTAA-CA---GAAG-GGT-GG-AAA-CCAATTT-------------GGAATCTCTTCTTTTT--CA-GACGTA--TTTA-TTGTAATG--------------------TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-TTA------G-TT-TCAAATTTT-T-G-A-T-AA-T-TTTATTTT-AATGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-A---CA--------TTCTAA-CAC-------------T--ATAATTA-T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAA-ACTGTGTTTT---A-CACCTCATG-AGC-AC-AA-TCT-CATCTTCTCT-A-A-CT-GTCAGCAATGCGAAA-CTA------CATATGCCAT-GTTAT-GT-ATGTTCTAAAA--TAT-T-GGA-TATAG---GT----GA--AGGTAG-C--A-G-TTT-AA-GT-A-AACCG-GGAA-G---AC-CAGCAA-TT-T-AA--CAC-TAATATAAA-TAG-TGTCGC---A-AGGG-ATA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TATTTTG--A-TATAT-CTCAGTCACTC-AGGAAGTATGAG--AGAGCAGGC-CTATGC-A-ATT-A--T-AC-TA-TA-TAC-TA-GTA-T-ATTTCC-AC-AAG-GGGA-GT--TC-------------------GTGGCCCC---TCATC---C--C---TTGC--TCCAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TTA-A----CAAC---GT----A--TAAGCC-CG-AAGAGCTTAGA---TTCGA---A-T-GCA-TTTTA---ACTAGCCAGGGGTTT--AAA--TG--CTGC-A--AGGGCTC----A-------------------------CTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TT---CAGAA-GGGCT----TTT-GTT-TCGGA-CAATTTTATG-----T-T-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAAC--AT-A-----TAGATTTTTTGTTGCTAC-TAG-C-ATATT-G--ATATTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-TCC-TAAATAATAGA--AT-CT-GTTCGAAA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-C-TAA-T--TCTT--CATATCA-C-TTA--G--C-AT--ATGAC----A-C-A-ACAT-TT-GGCA-A-TA-TC-AA-ATAT-T-GTAA-CA-T-TGAA-AAA-A------TG-T-A--AAAG--C-TG--AA-CTT--A-TTTTG----AA-A---------TAA---ATCAA--C--T-GACCCCGT-C-T-CTTCC-AGTACT--C-T---C--A-GTACTTTGATT
gi|30 : -AA-GA-T-AACCA-GGAAAG---TT-CGGTAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGT---A-AGGTTAAA-ATAATT--GG-----AACTA-TTCA---AGT-TA-TA-TTTG--A-TATAT-TTCAATCA
gi|31 : --C---TTGC--T-CAT-----AGGGAAAT-C-AT-CT--GAATTGG-CAA---TT--A----C-AC---GTATACA--TAAG-C-CG-AAGAGC-TAGA---TTCAA---A-T-GCA-TTTTAT--ACT-G-CAGGAG-CTTCAAA--TG--
gi|33 : TA--G-AC-CC--ATGAC----A---A-ACAT-TT-G-C--A-TA-TC-AA-ATAT-TTATAAACA-T-GC-G-AAA-A------TG-T-A--AAAGT-C-TG--TA-ATC--A-TTTTT----AA-A--T------TAA---GTTAA--T--T-GACCC
gi|35 : -ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--ATAGT-C-TT--AA--TT--A-CTTT---------------------------AA--T--T-GACCATGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTG
gi|36 : CTAT-G-A-CT-GTCAGCAATG--GAA-TTA---------------------------TGTTCTTAAA--TGT-T-GGA-TATAG---AT----GA--A-GGAG-C--A-GTTTT-AA-AA-
gi|37 : cgT--CATATCA-C-TTA--G-AC-AC--ATGAC----A-CAA-ACAT-TT-GAC--A-TA-TC-AC-ATA----GTAATCG-TATG-G-AAG-G------TG-t
gi|38 : TT--A-TTGTG----AA----T------TAA---TTCAA--T--TAGACCCCGT-C-T--T--C-AGTACT--CTT---C--A-GTACTTTG
gi|4 : TATAGATT-GTTTTTTAA-CA---GAA----T-GA-AA--CCA-TTT-------------G-AATCTCTTCTTTTTTCCA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-AATTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-A---CA--------T-CTCA-CAC-------------T--GTA-----T-GAT---------CTCTTTT----GATCTGTTT----A---CTCAA--TAC-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AAATCT-CATCATCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTA-AA-GA-A-TACCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TT-G--A-TATAT--TCAGCCACTC-A-AAAGTATGGGGAAGAACAGGC-CTATGCTT-ATT-A--C-AC-TA-TA--AC-TA-GTA-T-ATTCCA-AC-AAGTGGAA-GT--TC-------------------ATGGCCCA---T-AT----C--C---TTGC--T-CAT-----AGGGAAAT-C-GT-CT--AAAT-GG-CTA---TT--A----C-A----GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAATC----A-TTA--A-G---C-A--ATC--GTTCTTTCAT-A-TATAAACAATTT--TC---ATGTCTG-ATA-AAATTC---CAG-A-GGGTT----TTT-GTT-TCGGA-AACTTTTT-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GATC--AT-A-----T-GATTTTTTG-TG-TAC-TAC-A-TTA-T-A--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GA-A-TTTGA-A-TGTT-CAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-G--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|40 : AT-----AGCGAAAT-C-AT-TT--GAATTGG-CTA---TT--A----A-AC---GT----A--TAAG-C-CG-AA
gi|41 : --T--T-GAACCCGTTC-T-CT--C-AGTACTT-C-T---C--A-GTACTTTGATT
gi|42 : --T-GACCCCGT-C-T-CT--C-AGCACT--C-T---C--A-GTACTTAGA
gi|5 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GGGAA--CCA-TTT-------------G-AATCTCTTCTTT----CA-GACGT---TTTA-TTGTAATG--------------------TACATC-TT-GA-T-A-TCGTTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGTTG-A-A-AT-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTGTT----GATCTGTTT----AA--CTCAA--TAA-AC--TGTTTT---A-CA-TTCATG-AGCCAC-AACTCT-CATCTTCTCT-A-A-CTGGTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--ATT-T-GGA-TATAG---GT----GA--A-GTAG-C--A-G-TTT-AA-GA-A-AAACA-GGAA-G---AC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC-----AGGAT-AA-ATAATT--GG-----AACTC-TTCAGT-AGT-TATTA-TTTG--A-TA-AT-CTCAGTCACTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTATCTT-A--T-AC-TA-TA-TACTTA-GTA-T-ATTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCC---TCATC---C--C---TTGC--T-CAT-----AGGG-AAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAG-C-CG-AAG-GC-TAGA---TTCGA---ATT-GCA-TTTTAT--ACT-G-CAGGGG-TTTCAAA--TG--CTGC-A--AGGAATCA---A-TTA--------CAC--ATC--GTTCTTTCAT-AATATGAACAA-TT--TC---GTGTCTGAATG--A--TT---CAG-A-GGGCT----TTT-GTT-TCGGA-CAATTTTA-GT----TTT-----------------AA---T-----------------GA-A-TTGCA-A-T-AAGAT-AACA-CTA-GAAC--A--A-----T-GA--TTTTG--G-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-ATTTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT--AAATAA-AGA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---CAA-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATA--T-GTGA-CA---TG-A-AAA-A------TG-T----AACGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|6 : TATAGATT-GTTTT--AATCA---GAAG-G-T-G--AA--CCA-TT----------------AATCTCTTCTTTTC--AA-GAAGT---TTTA-TT-TAATG--------------------TACATCCT--GA-T-A-TCGGTACTTT-CAAATTAT-A------G-TT-TCAA-TTTTGT---A-T-AA-T-TTTAATTT-A-T--CATT--CCAAATAT----A-C---GAAA-CG--TTC-AAAACA--------T-CTA--CAC-------------T--ATA-----T-AAT---------CTCTTT-----GATCT--TT----AATACTCAAAATAA-AC---GTTTT---AACACCTCATG-AGCCAC-AA-TCT-CATCTTCTCT-A-AACT--TCAGCAATG---AA-CTA------CATATGC-ATAGT--T-GT-ATGTTCTTAAA--TAT-T-GGAATATAG---GT-----A--A-GTAG-C--A-GTTTT-AA-GA-A-AACCA-GGAA-A------CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T--CGC---C-AGGATAAATATA-TT--G------AACTC-T-CA---AGT--A--A-TTT---A-TAAATTCTCA-TCGCTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-AATT-AC-TA-TA-TAC-TA-GTATT-ATTCCA-AC-AAGT-GGA-GT--TC-------------------GTGGCCCC---TCAT----C--CCT-TCGC--T-CAT-----A-GGAAAT-C-GT-CT--GAA-TGG-CTA---TT--A----C-AC---GT----A--TAAG-C-CG-AAGAGC-TAGA---TTCGA---A-T-GCATTTTTAT--ACT-G-CAGGGG-TTTCAAA--TG--CTGC-A--AGGAATCA---A-TTA--AGG---C-C--ATC--TTTCTTTCAT-AATATGAACCAATT--TC---ATGTCTG-ATG-AA--TT---CAG-A-GGGCT----TTT-GTT-TCGGA-CCAATTTA-G-----TCT-----------------AA---T-----------------GA-A-TTGC----CAAAGAT-AACACCTA-AAAC--ATAA-----T-GATTTTTTG-T--TAC-TAG-ATTTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAATT--AATTTGAGG--GG-A-TTCGA-A-TTTA-C-CT-GTA--ATCAT-T-A--AACATGCCTAAAAATAA-A-A-TAT-CT-GTTCG-AAGA-C-TATATTCTAG------TA-C--------A----------A--------A---C-A-TAATT--TCTT--CATATCA-C-TTA--GAAC-AT--ATGAC----A-C-A-ACAT-TC--GC--A-TA-TCAAA-ATAT-T--TAA-CA-T-TG-A-AAA-AG-----TG-T-A--AAATT-CATG--AA-C-T--A-TTTTG-----A-A--T------TAAT--TTCAA--T--G-AACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|7 : TAGATT--TGTTTTAA-CA---GAAG-G-TTGA-AA--CCA-TTTTT-----------G-AATTTCTTCTTTT---CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TA-ATCCTT--A-T-A-TCGGTACTTT----------------------TCAAATTTTGT-G-AAT-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-AA--CA--------T-TCTA-CAC-------------T--GTAA----T-GAT---------CTCTTG-----GATCTGTTT----AA--CTCAA--TAACACTTTGTTTT---A-CACCTCATG-AGCCGT-AA-TCT-CATCATCTCT-T-A-AT-GTCAGCAATG--GAA-CTA------CATATAC-A--GT-AT-TC-ATG-TCCAAAATTTGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA-G--A-AACCA-GGAA-G---T--CAGCAATTT-T-AA-CCAC-TA--ACTAA-TAGTT-TCGC---A-AGGGTTAA-ATAATT--GG-----AACTC-TTCA---A-T-TATTC-TTTG--ATTATAT-CTCAGCCACTC-A-GAAGTAT-GGGAAGAG-AGGC-CTATGCTA-TTT-A--CAAC-TA-TA-TAC-TA-GTA-T-ATTCCA-A--AAGTGGAA-GTTGTC-------------------ATGGCCCC---TCAT----CT-C---TTGC--T-CAT-----AGGG-AAT-C-GT-CTCGGAATTGGTTTA---TT--A----C-AC---GT----A--TAAG-C-CG-AAGAGC-TAGA---TTCGA---A-TGGCA-TTGTAT--ACTTG-CAGGGGTGTTCAAA--TG--CTGCAA--AGGAATCA---A-TTATCA-G-----C--ATC--CTCTTTTCATAAATATGAA-AA-TT--TC---A-GTCTG-ATG-AA--TT---CAG-A-GGG-T----TTT-GTT-TCGGA-AAATTTTA-G-----TCT-----------------AA---T-----------------GA-ATTTGCA-A-TAAAGAT-AACACCTA-G
gi|8 : cTATAGATT-TGTTTTTAA-CA---GAAG-GAT-GT-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATC-T-A------G-TT-TCAAATTTTGG-G-A-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-AGA-TTC-AA--CA--------T-CTGA-CAC-------------T--GTG-----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAC-ACTTTGTTTT---A-CACCTCATA-AGTCGC-AA-TTT-CATCATCTCT-T-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA-GA-T-ATGCA-GGAA-G---TC-CAGCAATTC-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGG-TAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGTCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATC-A--C-AC-TC-TA-TGC-TA-GTA-T-ATTCCA-AC-AAGTGGAA-GT--TCATGTAGGGGAGGGTGCTGAGTGGCCCCGAACGATGTTGC--CAGTTTGC--TCCAT-----TGGGAAATGC-GT-CT--GAATGGC-CTAAATTC--AGCTCC-CT---GT----A--TAAGCCACGAAAGAG
gi|9 : a-TA-GTA-T-ATTCCA-ACCAAGTGGGA-GT--TC-------------------GTGGCCC----TCAT----CGCC---TTGCATT-CAC-----AGGGAAAT-G-CT-CT--GAATTG--CTA---TT--A----C-AT---GT----AAACAAGCC----AAGAGC-TAGA---TTCGACGCA-T-GCA-TT--AT--ACTG--CAGGGGTTT-CAAAAATGGCCTGC-A--AGGAACA----A-TTA--A-G---C-CCCATC--GTTCTTC--T-AAT-CGAA-AATT----C---ATGTCTGGATG-A---TT---CAG-A-GGGCTCTTTTTT-GTTGTCGGACAAATTTTAAG-----TCT-----------------AA---T-----------------GA-A-TTGCA-AATAAAG-T-AACACCTA-GAACC-AT-A-----T-GATTCTTTG-TG-TAT-AAG-A-T-A-T-G--AT-TT-CGCT--------AGACAATT-TCTATT-AA-T--AATTTGAGGT--G-A-TTCGAGA-TTTA-CACT-GTAG-A-CAC-T-T--AACATCCCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A--ATAT-TTCTAG------TA-C--------A----------A--------A---C---TAATT--TCTT--AATATCA-CGTGA--G-AC--T--ATGACCACTA-C-A-ACATCTT-GGC--A-TA-TC-AA-A-ATAT-GTAA-CA-T-TG-G-AAA-AAGATTTTA-A-A--AAAGTCC-TG--AA-CTA--A-TATTG-----A-A--T------TAATATTTC-A--T--T-GACCCCGTACGT-CT--C-AGTACTTAC-T---CCGG-GTACTTTG
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): AATAAATAATCATCTAATCTGTTTTTTTTGGTTTAATGTAAGCTATCGCAAGACGTTATCTCGGCCTACGGTATTCAAATTTACTTTATTCTTGT
Unaligned ( gi|34 ): TGTTAACTTACCATGTATAGTTCTTTCTGGTGCACACACCTCAATTGTTTGATTTCCAGAATCGTTTATCACACAATGATATTTAAT
Unaligned ( gi|39 ): TTTTATCATTGTAAGCGTGCGATGAAATTGACGAATTATTTTGT
Alignments
lowQualScore : 222 222222222222222 111 111 44444444444444444444 111111 1 11111111 1111111111111 22222 111111111 22222 1111 111111 2222222222222222222 111111 1111 111 222 1 1111111111111 1111111 11111 5555555555555555555555555555555555555555 11111111 1 111111 2222222222222222222222222222 111111
lowQualScore : 66 3 666 222 3 3 88 3 555555555555555 777 3 000 3 88888888888888888888 2 2 2 2 2 2 5 111111 2 2 5 2 2 2 2 8 1 5 2 33 6666 8 555 5 3 3 444 44444444 3 3 6666666666666 44 44444 3 222222222 22222 0000 44 77 3 88 555 3 3 3 7 3 4 444 3 3 44 3 888888 0 3 66 3 3 3 77 3 3 6 555 6666 44 3 3 44 6 0 2 33 4 3 3 5 000000 2 2 2 2 33 2 5 2 66666 3 5 33 77777 2 888 333 5 2 33 5 2 5 0 3 3 3 3 3 44 3 3 3 3 3 3 3 3 3 3 3 44 5555555555555555555 000000 3 555 3 8888 77777 3 3 3 44 0 3 555 77 7777 3 555 6666 44 2222 3 7 666 000 3 3 3 55 333 3 4 55 55 4 55 777 0 5555555555555 55 7 1 1 2222222 0 6 3 44 3 3 7777 3 3 3 3 44 6 11111 9999999999999999999999999999999999999999 3 3 3 3 3 3 77 3 88888 3 3 7 3 444 777777 3 33333333 3 3 44 6 3 3 3 6 1 3 3 3 3 5555 2 88 3 77 3 3 2 2 2 2 222222 2 4444444444444444444444444444 444 444 5 33 33 4 4 33 2 33333 4444 2 4 4 2 2 55 2 2 2 2 6 2 4 2 2 444 2 222222 2 4444 2 2 33 2 33 4 4444 2 888888888 666 33 22 2 4 2 2 33 2 55 2 333 33 2
lowQualScore : .. . ... ... . . .. . ............... ... . ... . .................... . . . . . . . ...... . . . . . . . . . . . .. .... . ... . . . ... ........ . . ............. .. ..... . ......... ..... .... .. .. . .. ... . . . . . . ... . . .. . ...... . . .. . . . .. . . . ... .... .. . . .. . . . .. . . . . ...... . . . . .. . . . ..... . . .. ..... . ... ... . . .. . . . . . . . . . .. . . . . . . . . . . . .. ................... ...... . ... . .... ..... . . . .. . . ... .. .... . ... .... .. .... . . ... ... . . . .. ... . . .. .. . .. ... . ............. .. . . . ....... . . . .. . . .... . . . . .. . ..... ........................................ . . . . . . .. . ..... . . . . ... ...... . ........ . . .. . . . . . . . . . . .... . .. . .. . . . . . . ...... . ............................ ... ... . .. .. . . .. . ..... .... . . . . . .. . . . . . . . . . ... . ...... . .... . . .. . .. . .... . ......... ... .. .. . . . . .. . .. . ... .. .
lowQualScore : 55 6 444 333 6 6 66 6 555555555555555 999 6 000 3 44444444444444444444 9 9 9 9 9 9 7 111111 9 9 7 9 9 9 9 6 4 7 9 99 1111 6 000 7 1 1 888 22222222 1 1 9999999999999 22 66666 1 333333333 00000 4444 66 99 3 88 888 3 3 6 3 6 5 666 1 1 22 1 888888 7 1 55 1 1 1 33 1 1 2 444 5555 22 1 1 22 2 4 9 99 0 1 1 7 888888 9 9 9 9 99 9 7 9 55555 6 3 99 11111 9 999 777 7 9 99 7 9 7 8 1 3 3 3 3 66 3 3 3 6 3 3 3 3 3 3 3 22 8888888888888888888 555555 6 888 3 3333 77777 1 1 1 22 4 3 888 99 1111 3 444 5555 22 8888 1 3 444 000 6 6 6 00 777 3 4 00 00 0 55 000 8 0000000000000 00 3 0 3 4444444 7 7 3 66 3 3 1111 3 3 3 3 66 7 77777 5555555555555555555555555555555555555555 3 3 3 3 1 1 99 3 33333 3 6 3 6 999 777777 6 22222222 3 3 66 7 3 3 3 7 0 3 3 3 3 1111 0 99 3 22 1 1 9 9 9 7 333333 7 7777777777777777777777777777 777 555 3 77 22 7 7 11 2 55555 7777 2 4 4 2 2 33 2 2 2 2 7 2 4 2 2 333 2 555555 2 6666 4 4 22 4 11 4 7777 2 111111111 555 11 99 1 4 2 2 11 2 33 2 999 11 2
consensus : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACT-CTTCA---AGT-T-A-TA-TTTG--A-TATA-T-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--A-G---C-C--ATC--GTTCTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
Reference ( family-2307 ) : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GANAA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACT-CTTCA---AGT-T-A-TA-TTTG--A-TATA-T-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--A-G---C-C--ATC--GTTCTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|1 : TATATT-GTATTTTAA-CATTTAAAGAG-T-GG-AA--CCA-TTT---------------AATCTCTTCTTT----CATGACGTGGGTGTG-T-GTGATGGGGGGCTGT---AA-GGT--TACAATCCT-GA-T-A-TCG-TACTTT-CAAATT-T-A------G-TTATCAAATTTTGT-A-G-TCAA-T-TT-ATTTC-A-TGTCACTATCCAA-TAT----AGC---GAAA-CGA-TTCCAA--CA--------T-CTAA-CAC-------------T--ATA-----TTGAT----------TCTCTT----GATC-GCTCCTCCAA--CTCAAC-TAA-ACT--GTTTT---A-CACCTCATG-AGCCAC-AA-TCT-CATCTTCTCTTA-A-CT-GTCAGCAATG---AA-CTAAGTTATCATATGC-AT-GT-ATTGT-ATGTCCTAAAAA-TAA-TAGGA-TATAA---GA----GAGCA-GTAG-CCCACGTT---AA--GATAAACCA-GGAA-GACGTCGTAGCAAATTAT-AA-C-AC-TA--ATAAA--AG-T-TCTC---ACAGGATAAA-A--ATT---------AACT-CT-CA---ATT-T-A-TA-TTGA--A-TATA---CTCAGCTACTC-A-GAA-TATAGG-AAGACCCAGCACTATGCAA-GTTGA--T-AC-TAGTAATAC-GA-GCAT-A-TTCCA-AC-AAGTGGGACGT--TC-------------------GTG--CCCTCA------TC-CC---TT-GC----CAT-----AGGAAAAT-CAGT-CT--GAATTAG-CTA---TTTTA----T-ATTCTGT----A--TATACA-T---AGAGCATAAAGATTTCGAC--A-T-GCA-TTTTATTTACTG--CAAGGTTTTTCAA---TG--CTGT-ATAAGGAATTCCCAATTA--A-AGCTC-T--ATTCTGTTCTTTCATTAATATGAACAATTTCATC---GCGT----ATG-AA--T-CAG-A-GGGCT----TTTTGTT-TCGGACAA-TT-AT--A-G-----TCTAA---------------AA---T-----------------GACA-TTGCA-A-TAAAGATAAACACCTACGAAC--AT-ATTTATT-GGTTATTTC-TT-TATGTAG---TCA---G--AT-TTCCGCTTACTGCACAGATTATG-CTTATTTAA-TGAAGTTTGAGGT-GGCA-TTCGA-ATTTTA-CACTGGTAG-ATCATAT-ATTTACAT-CCTAAAAATCA-TTATTATCCT-G-TCA-AA-C-CATAT-TTCTAG------TA-C--------A----------A--------AATTC-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-CAA-ACA--TT-GGC--ATTA-TC-AAGATAT-G-GAGA-AATT-TG-A-AAA-AAAG---T--T-A--AAAGT-C-TGGAAG-CTT--A--TGTG----AG-G--TAGTTTATAA---TTCAA--TAGT-GACCCCGT-C-TGCT--C-AGTATC--G-T---C--A---ACTTT
gi|10 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GG-AA--CCA-TTT-------------G-A-TCTCTTCTTTTTT-CA-GACGT---TTTA-T-GTAATG--------------------TACATCCTT-GAAT-A-TCGGTACTTTTCATAAT-T-A------G-TT-TCAAATTTTGT-GGA-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-CTAAGAAA-CGAATTC-AA--CA--------T-CTAA-CA--------------T--ATA-----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAA-AACTGGTTTT---A-CACCTCATGGAGCCAC-AA-TCTTCATCTTCTCT-A-A-CT-TTCCACAATG--GAA-CTA------CATATGC-AT-GT-AT-GTTATGTTCTAAAA--TAT-T-GGAATATAG---GT----GA----GTAG-C--AAGTTTT-AA--GATAA-CCA-GGAAAG---AC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TTGCGGCA-GGGATAACCATAATT--GG-----AACT-CTTCA----GT-T-A-TA-TTTG--A-TATA-TGCTCAGTCAGTCCA-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TT-AA-TAC-TA-GTAT-AATTCCA-AC-AAGTGGGA-GT--TC-------------------TTGGCCCTTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTG
gi|11 : gTATAG-CT-GTTTTT--A-CA---GAAG-GCT-GG-AA--CCA-TTTCTGAGCACACAACG-AA-ATCTTCTTTT---CA-GACGT---TTTAATTGTAA-GC----CTATAG-GA-GAAGTTACATCCTTAGA-T-AGTCGGTACTTT-CAAATT-TCAC-----A-TC-TCAAATTTTGG-G-A-T-AA-T-TT-ATTTTTA-C-TCATT--CCAAATAT----ATC---GAAA-CGA-TTC-AA--CA--------T-CTAAACAC-------------T--ATACT---T-GAT---------CTCTTTG----AATCTGTTTT---AA--CTCAA--TAA-ACTGTGGTTTCTAA-CCACTCATG-AGCCGCCAA-TCT-CATC-TCTCT-AGA-CT-GTCAGCAATG--GAA-CTA------CATATGC-ATTGT-AT-GT-ATGTTCTAAAA--TAT-T-GGC-TATAG---AT----GA--A-GTAGGC--A-GGT---AATGAACAA-CCA-GGA--G---TC-CAGCAATTT-TGAA-CCACCTA--ATAAACTAG-T-TCGC---A-AGGTTAAA-ATAATT---G-----AACT-CTTCA---AG--T-A-TA-TTTGACA-TATA-T-CTCAGTCACTC-A-GACGTATGGGAAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-
gi|12 : aC---A-AGGTTAAA-ATAATT--GG-----AACT-CTTCA---AGT-------------------A-T-CTCAGCCACTC-A-GAAGTATGGGGAAGAAGAGGC-CTATACTA-ATT-A--T-AC-TA-TA-TA---A---AT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCCTCA------TC-CC---TC-GC--T-TATAGGGAAGGGAAAT-C-AT-TT--GAATTGG-CTA---TT--A----C-AC---AT----A--TAAG-C-CG-AAGAGC-TAGA-----------------------AT--ACT-G-CAGGGG-CTTCAAA--TG--CTGC-A--GGGAAT---CAATGA--A-G---C-C--ATT--GTTCTTTCAT-AATATGAACCATTT--T----ATGTCTG-ATGAAA--ATCAG-A-GGTCG----TTT-GTT-TCGGACAA-TT-TT--A-GTCCTATCT-----------------AAACCTCTTGGAAAA--------GA-A-TTGCA-A-TAAACAT-AACACCTA-TAGC--AT-A-----T-AATTTTTCG-CG-TAC-TAG-A-TTA-C-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GA-A-TTCGA-A-TGTA-CACT-GTAG-ATCAT-T-C--AAC
gi|13 : GAAC---CAATTA--A-G---C-C--ATT--GTTCTTTCAT-AATATGAACCATTA---C---AAGGCTG-ATG-AA--TTCGG-A-GG------------CT-AAGGACAA-TT-CT--A-G-----TCTTATTCAAACCTCCTGGAAA---A-----------------GA-A-TTGCA-A-TAAACAT-AACTCCTA-GAGC--AT-A-----T-G
gi|13 : AAATAA-AGG-GGT-CT-GTTTG-AA-A-CACAT-TTCTAGAACTAGTA-C--------A----------ATGTATTAAA---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGGC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CG-T-TG-A-AAATA------TG-T-A--AAAGT-C-TG--AA-CT---------------------------------TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaataaaggggtctgtttgaaacacatttctagaactagtacaatgtattaaacataattcttcatatcacttagacatatggcacaacatttggcatatcaaatattgtaacgttgaaaatatgtaaaagtctgaacttttaattgaccccgtctctcagtactctcagtactttgat
gi|14 : gaaccaattaagccattgttctttcataatatgaaccattacaaggctgatgaattcggaggctaaggacaattctagtcttattcaaacctcctggaaaagaattgcaataaacataactcctagagcatatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttt-TTGTAATGC----CTTTCGCAA-G----TACATCCTT-GT-T-A-ACGGTACTTT-CAAATT-T-ACCGACAG-TC-ACAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGCCATT--CCAAATAT----A-C---GAAA-CGA-TTT-CA--CACTATACAGT-TTGA-TACGTTAATACTCATTT--ATA-----T-GAT---------CTC-TTT----GGTCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCCCATG-AGCCGC-AA-TAT-CATCATCTAT-G-A-CT-GTCAGCAATG--GAA-CTA------CATA--------T-AT-GT-GTGTTCTAAAA--TGT-T-GGA-TATAGCAAATATAAGA--T-GTAG-C--A-GTTTT-AA--GATAA-CCAGGGAA-G---TC-CAGCCATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-A
gi|15 : gATGAACCATTT--CTTGAAAGGCTG-ATG-AA--TT-----------------T-GCC-AAGGACAA-TTATTCAA-A-----CCTCCTGGA-----------AA---A-----------------GA-A-TTGCA-A-TAAACAT-AGCACCTA-GAGC--AT-A-----T-GGTTTTTTG-TG-TAC-TAG-A-TTA-TAG--TT-TTTCACT--------AGACAATT-CCTATTTCC-C--AATTTGAGGT-GG-A-TTCGA-A-TGTA-CACT-GTTG-ATCAT-TCA--AAC-T-TCT-AAAATAA-AGA-GGT-CT-GTTTG-AA-A-CATAT-TTCTAG------TA-CAGTGTATTA----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-------GAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT---------------------------------------------TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-TACCCCGT-C-T-CT--C-AGTACT--A-----C--A-GTACTTTGATT
gi|16 : TTTTTAA-CA---GAAA-GAT-GG-GA--CCA-TGT-------------G-AATCTCTTCTTTTTT-CA-GAAGT---TTTA-TTGTTTTAT----TTTTCGTAA-G----TACATCCTT-GA-T-A-TCGGTACTTT-TAAATT-T-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATATTATAA-C---GAAA-CGA-TTC-AT--CA--------T-CTAA-CAC-------------T--ATACTGTTT-GGTACGTTAATACTCCTTTATATGATATCTTT----AA--CTCAA--TAA------GTTTT---A-CACCTCATG-At
gi|17 : tgAT-AACACCTA-GAGG--AT-A-----T-GATTTTTTT-TG-TAC-TA--A-TTA-T-ATAAT-TTTCGCT--------A-ACAATTCTCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-AGTGTAACAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA--GA-GAT-CTTGTTCG-AA-AACATAT-TTCTAG------TAAC--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGCGGA-TA-TC-AA-ATAT-T--TAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-TT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnngaggggaagtaatttattttactgcattggcgctttttttgtcctatgaat
gi|18 : TT--CATATCAAC-TTA--G-ACCAT--G-GAC----AAC-ATACAT-TT-GAC--A-TA-TT-CA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TGTT-ATTAAAGT-C-TG--AC-ATT--C-TTTTGCATTAA-AATT------TAA------AA--T--G-GAACCCGT-C-T-TC--C-GGCGGT--C-TTTCC--G-GTACTTTG
gi|19 : ccggaaaaataaggtttacatgcacgtgcctacatCTAT-G-A-CT-GTCAGCAATG--GAAACTA-----------------------GT----TTCTAAAA--TGTCT-GAA-T---G---AT----GA--A-GTAG-C--A-GTTTTTAA--GATAC-ACA-TAAA-G---TCTCAGCAAGTT-T-AAACCAC-TA--GTAA--TAG-T-TCGC---A-AGGGT-AA-ATAA-T--GG-----AACTCCTTTA---AGT-TAA-TA-TTTG--A-TATATT-CTCTGCC-CTC-A-GAGGTATGGGGAA-AGCAGGC-CTATGCTA-ATT-A--T-ACTTA-TA-TAC-TAGGTAT-A-TTCCAGAC-AAGTGGGA-GT--Tgaatttgtagttgaaccaagctcaacgtaatccatataatccattggagacgcaagcacctcaat
gi|2 : TT-GTTTTTAAA-AA---GGAA---T-AG-AAAACCA-TT--------------G-AATCTCTT-TTTTT--CA-GACGT---TTTA-TTGTAATGC-----TATCG-AAAG----TACATC-TT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TTAATTTTTGTTG-A-T-AAAT-TT-ATTTTTA-TGTC------CAAATTT----A-C---GAA--CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--GTAA----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TCA---CTTGTTTT---A-CACC--ATG-AGCCGC-AA-TC--CATCATCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TG--T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-------TAA-TC---GA-----------------T-T-AA-CGAC-GA--ACTAA-TAGAT-TCGC-----AGGTTAAA-ATAATTTCGAAATCTAACT-ATTCAGCCAGTGT-A-TA-TTCG--ATTATA-T-CT-AACC-CTC-a
gi|2 : --TC-------------------ATGGCCCCTCA------TC-CC---TT-GT--G-TAT-----TGGGAAAA-C-GTGCT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCA--G-AA-AGC-TAGA---TTCGA---A-T-GCT-TTTTAT--ACTG--CAGGGGTTT-CAAA--TG--CTGC-A--AGGAAT---CA-TTA--A-G---C-C--ATC--GTTCTTTCAT-A-TATGAACAATTT---C---ATGTCTG-ATG-AA--TTCAG-AGGGGCT----TTT-GTT-TCGGAAAA-GT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCACA-T-AAGAT----ACCTA-GAGCATAT-A-----T-GA-CTTTTG-TGTTAC-TAGAA-TTA-T-A--A--TTTCGCT--------AGAC-ATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCG--A-TGTA-CA-T-GTAATATCAT-T-A--AACATACCT-AAAATAA-AGA-AGA-CT-GTTCG-AA-A-CATTA-TTCTAG------TA-C--------A----------A--------A---C----AA-TTATCTT--CATATCA-CTTTA--G-AC-A---ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATATAT-GTAA-CA-A-TG---AAA-A------TG-T----AAAGT-C-TG---A-CTT--A-TTTTG----AA-A--T------TAA---TTC-A--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggatatcatggcccctcatcccttgtgtattgggaaaacgtgctgaattggctattacacgtataagcagaaagctagattcgaatgctttttatactgcaggggtttcaaatgctgcaaggaatcattaagccatcgttctttcatatatgaacaatttcatgtctgatgaattcagaggggcttttgtttcggaaaagtttagtctaatgaattgcacataagatacctagagcatatatgacttttgtgttactagaattataatttcgctagacatttctatttaataatttgaggtgggattcgatgtacatgtaatatcattaaacatacctaaaataaagaagactgttcgaaacattattctagtacaaacaattatcttcatatcactttagacaatgacacaacatttggcatatcaaatatatgtaacaatgaaaatgtaaagtctgacttattttgaaattaattcattgaccccgtctctcagtactctcagtactttgatttc
gi|20 : ttgtttttaaaaaggaatagaaaaccattgaatctctttttttcagacgttttattgtaatgctatcgaaagtacatcttgatatcggtactttcaaatttagttttaatttttgttgataaatttatttttatgtccaaatttacgaacgattcaacatctaacactgtaatgatctctttgatctgtttaactcaatcacttgttttacaccatgagccgcaatccatcatctctaactgtcagcaatggaactacatatacatgtatgtatgtcctaaaatgtggatatagatgaagtagcagtttttaatcgattaacgacgaactaatagattcgcaggttaaaataatttcgaaatctaactattcagccagtgtatattcgattatatctaaccctcttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggata-TCTATTTAA-T--AATTTGTGGT-GG-A-TTCGA-A-TCTA-CACA-GTAG-ATCAT-T-A--AA-----------------GA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATAACA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-AGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTtc
gi|21 : TT--GTTCTTTCAT-AATATGAACCATCT---C---ATGTCTG-ATG-AA--TTCAG-A-GGGCG----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------TA---TTTAAACCTCTTGGAAAAGA-A-TTGCA-A-TAAACAT-AACATCTA-GAGC--AT-A-----T-AATTTTGTG-TG-TAC-TAT-A-TTA-C-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GG-A-TTCGA-A-TATA-CACT-GTAG-ATCAT-T-C--AAC
gi|22 : G-AA-A-CATAT-TTCTAG------TA-C--------AGTGTATTAAAA--------A---A-A-TAA-T--TCTT--CATATCA-C-TTA--G-AT-TC--ATGAC----A-C-A-AAAT-TT-GGC--A-TA-TT-AA-ATAT-T-GCAA-CA-T-TG-T-AAA-A------TA-T-A--AAAGT-C-TG--AA-CTT--A-TTTTA----AA-A--T------TAA---TTTAA--T--T-GACCTCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGAT
gi|23 : atgtcattgttataccaaaagaaggaagggaagaagatAT-CT-GTTCG-AA-A-CAT-T-TTCTAT------TA-C--------A----------A--------A---C-AATAA-T--TC-----ATATCAGC-TTGAGG-AC-AA--ATGAC----A-C-AGACAT-TTTGGC--A-TAATC-AA-ATAT-C-GTA--CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CCTTAA-TTTTG----AA-AT-T------TAA---TTCAACTT--T-GACCCCGT-C-T-CT--CAAGTACT----T---C--ATGTACT
gi|24 : aagcaatA-G---TC-CAGCAATTT-T-AA-CCAC-TA--GTAAA-TAG-T-TCGC---A-AGGTTAAA-ATAACT--GG-----AACT-CTTTA---AGT-T-A-TA-TTTG--A-TATA-T-CTCTGCCCCTC-A-GAGGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------gat
gi|25 : AATGC----CTATCGCAA-G----TACATCCTT-GA-T-A-TCAGTACTTT-CAAATT-C-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-Ca
gi|26 : tatctactcttttttgcagaagtttttatgtnnnnnnnnnnnnnnnnnnnnnnnnn----TACATCGCT-GA-CGA-TCGG-ACTTT-CAAATT-T-A------GTTT-TCACA-TTTGT-G------A-T-TA-ATATT-A-TGTCATT--CCAAATAT----AGC---GAAA-CGA--TC-AA--CAC-------T-CTAA-CAC-------------TTCATA-----T-GAT---------CTC-TTT----GATCTGTT
gi|27 : gaatga---GT----A--TAAGCC--G-AAGAGC-TAGA---TTCGA---A-T-GCT-TTTTAT--ACT-G-TAGGGG-TTTCAAA--TG--CTGC-A--
gi|28 : tacttgcgagacactgacatacatatcctctctccctnnnnnnnnnnnnnnnnnnnnnnnnnctAT-TTTTAAATT---TA-T--------G----------G--------G---C-A-TAA-T--TCTTTTCATA-CA-C-GTA--G-A--ATTCATGAC----A-C-A-CCAG-TT-TGC--A-TA-TC-AA-ATATAT-GTAA-CA-T-TG-GTAAA-A------TG-TAA--AAAGT-C-TG--AACCTT--A-TTTTG----AACA--T------T
gi|29 : TAA-AGA-GGT-AT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------ACTGTTTTA--A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-GTAT-TT-GGC--A-TA-TC-
gi|3 : ctacccagtttgcatTATAGATTTGTTTTGTAA-CA---GAAG-GGT-GG-AAA-CCAATTT-------------GGAATCTCTTCTTTTT--CA-GACGTA--TTTA-TTGTAATG--------------------TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-TTA------G-TT-TCAAATTTT-T-G-A-T-AA-T-TTTATTTT-AATGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-A---CA--------TTCTAA-CAC-------------T--ATAATTA-T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAA-ACTGTGTTTT---A-CACCTCATG-AGC-AC-AA-TCT-CATCTTCTCT-A-A-CT-GTCAGCAATGCGAAA-CTA------CATATGCCAT-GTTAT-GT-ATGTTCTAAAA--TAT-T-GGA-TATAG---GT----GA--AGGTAG-C--A-G-TTT-AA--GTAAA-CCG-GGAA-G---AC-CAGCAA-TT-T-AA--CAC-TAATATAAA-TAG-TGTCGC---A-AGGG-ATA-ATAATT--GG-----AACT-CTTCA---AGT-T-A-TATTTTG--A-TATA-T-CTCAGTCACTC-AGGAAGTATGAG--AGAGCAGGC-CTATGC-A-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTTCC-AC-AAG-GGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--TCCAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TTA-A----CAAC---GT----A--TAAGCC-CG-AAGAGCTTAGA---TTCGA---A-T-GCA-TTTTA---ACTAGCCAGGGGTTT--AAA--TG--CTGC-A--AGGGCT---CA-------------------------CTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAGAA-GGGCT----TTT-GTT-TCGGACAA-TT-TT--ATG-----T-T-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAAC--AT-A-----TAGATTTTTTGTTGCTAC-TAG-C-ATATT-G--ATATTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-TCC-TAAATAATAGA--AT-CT-GTTCGAAA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-C-TAA-T--TCTT--CATATCA-C-TTA--G--C-AT--ATGAC----A-C-A-ACAT-TT-GGCA-A-TA-TC-AA-ATAT-T-GTAA-CA-T-TGAA-AAA-A------TG-T-A--AAAG--C-TG--AA-CTT--A-TTTTG----AA-A---------TAA---ATCAA--C--T-GACCCCGT-C-T-CTTCC-AGTACT--C-T---C--A-GTACTTTGATT
gi|30 : -AA--GATAA-CCA-GGAAAG---TT-CGGTAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGT---A-AGGTTAAA-ATAATT--GG-----AACT-ATTCA---AGT-T-A-TA-TTTG--A-TATA-T-TTCAATCA
gi|31 : C---TT-GC--T-CAT-----AGGGAAAT-C-AT-CT--GAATTGG-CAA---TT--A----C-AC---GTATACA--TAAG-C-CG-AAGAGC-TAGA---TTCAA---A-T-GCA-TTTTAT--ACT-G-CAGGAG-CTTCAAA--TG--
gi|33 : TA--G-AC-CC--ATGAC----A---A-ACAT-TT-G-C--A-TA-TC-AA-ATAT-TTATAAACA-T-GC-G-AAA-A------TG-T-A--AAAGT-C-TG--TA-ATC--A-TTTTT----AA-A--T------TAA---GTTAA--T--T-GACCC
gi|35 : -ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--ATAGT-C-TT--AA--TT--A-CTTT---------------------------AA--T--T-GACCATGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTG
gi|36 : CTAT-G-A-CT-GTCAGCAATG--GAA-TTA---------------------------TGTTCTTAAA--TGT-T-GGA-TATAG---AT----GA--A-GGAG-C--A-GTTTT-AA--AA
gi|37 : cgT--CATATCA-C-TTA--G-AC-AC--ATGAC----A-CAA-ACAT-TT-GAC--A-TA-TC-AC-ATA----GTAATCG-TATG-G-AAG-G------TG-t
gi|38 : TT--A-TTGTG----AA----T------TAA---TTCAA--T--TAGACCCCGT-C-T--T--C-AGTACT--CTT---C--A-GTACTTTG
gi|4 : TATAGATT-GTTTTTTAA-CA---GAA----T-GA-AA--CCA-TTT-------------G-AATCTCTTCTTTTTTCCA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-AATTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-A---CA--------T-CTCA-CAC-------------T--GTA-----T-GAT---------CTCTTTT----GATCTGTTT----A---CTCAA--TAC-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AAATCT-CATCATCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTA-AA--GAATA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-ATAATT--GG-----AACT-CTTCA---AGT-T-A-TA-TT-G--A-TATA-T--TCAGCCACTC-A-AAAGTATGGGGAAGAACAGGC-CTATGCTT-ATT-A--C-AC-TA-TA--AC-TA-GTAT-A-TTCCA-AC-AAGTGGAA-GT--TC-------------------ATGGCCCAT-A------TC-C----TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--AAAT-GG-CTA---TT--A----C-A----GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---C-ATTA--A-G---C-A--ATC--GTTCTTTCAT--ATATAAACAATTT--TC---ATGTCTG-ATA-AAATTCCAG-A-GGGTT----TTT-GTT-TCGGAAAC-TT-TT--T-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GATC--AT-A-----T-GATTTTTTG-TG-TAC-TAC-A-TTA-T-A--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GA-A-TTTGA-A-TGTT-CAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-G--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|40 : AT-----AGCGAAAT-C-AT-TT--GAATTGG-CTA---TT--A----A-AC---GT----A--TAAG-C-CG-AA
gi|41 : --T--T-GAACCCGTTC-T-CT--C-AGTACTT-C-T---C--A-GTACTTTGATT
gi|42 : --T-GACCCCGT-C-T-CT--C-AGCACT--C-T---C--A-GTACTTAGA
gi|5 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GGGAA--CCA-TTT-------------G-AATCTCTTCTTT----CA-GACGT---TTTA-TTGTAATG--------------------TACATC-TT-GA-T-A-TCGTTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGTTG-A-A-AT-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTGTT----GATCTGTTT----AA--CTCAA--TAA-AC--TGTTTT---A-CA-TTCATG-AGCCAC-AACTCT-CATCTTCTCT-A-A-CTGGTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--ATT-T-GGA-TATAG---GT----GA--A-GTAG-C--A-G-TTT-AA--GAAAA-ACA-GGAA-G---AC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC-----AGGAT-AA-ATAATT--GG-----AACT-CTTCAGT-AGT-T-ATTA-TTTG--A-TA-A-T-CTCAGTCACTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTATCTT-A--T-AC-TA-TA-TACTTA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGG-AAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAG-C-CG-AAG-GC-TAGA---TTCGA---ATT-GCA-TTTTAT--ACT-G-CAGGGG-TTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--------CAC--ATC--GTTCTTTCAT-AATATGAACAA-TT--TC---GTGTCTGAATG--A--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-GT----TTT-----------------AA---T-----------------GA-A-TTGCA-A-T-AAGAT-AACA-CTA-GAAC--A--A-----T-GA--TTTTG--G-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-ATTTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT--AAATAA-AGA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---CAA-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATA--T-GTGA-CA---TG-A-AAA-A------TG-T----AACGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|6 : TATAGATT-GTTTT--AATCA---GAAG-G-T-G--AA--CCA-TT----------------AATCTCTTCTTTTC--AA-GAAGT---TTTA-TT-TAATG--------------------TACATCCT--GA-T-A-TCGGTACTTT-CAAATTAT-A------G-TT-TCAA-TTTTGT---A-T-AA-T-TTTAATTT-A-T--CATT--CCAAATAT----A-C---GAAA-CG--TTC-AAAACA--------T-CTA--CAC-------------T--ATA-----T-AAT---------CTCTTT-----GATCT--TT----AATACTCAAAATAA-AC---GTTTT---AACACCTCATG-AGCCAC-AA-TCT-CATCTTCTCT-A-AACT--TCAGCAATG---AA-CTA------CATATGC-ATAGT--T-GT-ATGTTCTTAAA--TAT-T-GGAATATAG---GT-----A--A-GTAG-C--A-GTTTT-AA--GAAAA-CCA-GGAA-A------CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T--CGC---C-AGGATAAATATA-TT--G------AACT-CT-CA---AGT---A--A-TTT---A-TAAA-TTCTCA-TCGCTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-AATT-AC-TA-TA-TAC-TA-GTATTA-TTCCA-AC-AAGTGG-A-GT--TC-------------------GTGGCCCCTCA------TC-CC---TTCGC--T-CAT-----AGG-AAAT-C-GT-CT--GAAT-GG-CTA---TT--A----C-AC---GT----A--TAAGCC--G-AAGAGC-TAGA---TTCGA---A-T-GCATTTTTAT--ACT-G-CAGGGG-TTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--AGG---C-C--ATC--TTTCTTTCAT-AATATGAACCAATT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACCA-AT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGC----CAAAGAT-AACACCTA-AAAC--ATAA-----T-GATTTTTTG-T--TAC-TAG-ATTTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAATT--AATTTGAGG--GG-A-TTCGA-A-TTTA-C-CT-GTA--ATCAT-T-A--AACATGCCTAAAAATAA-A-A-TAT-CT-GTTCG-AAGA-C-TATATTCTAG------TA-C--------A----------A--------A---C-A-TAATT--TCTT--CATATCA-C-TTA--GAAC-AT--ATGAC----A-C-A-ACAT-TC--GC--A-TA-TCAAA-ATAT-T--TAA-CA-T-TG-A-AAA-AG-----TG-T-A--AAATT-CATG--AA-C-T--A-TTTTG-----A-A--T------TAAT--TTCAA--T--G-AACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|7 : TAGATT--TGTTTTAA-CA---GAAG-G-TTGA-AA--CCA-TTTTT-----------G-AATTTCTTCTTTT---CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TA-ATCCTT--A-T-A-TCGGTACTTT----------------------TCAAATTTTGT-G-AAT-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-AA--CA--------T-TCTA-CAC-------------T--GTAA----T-GAT---------CTCTTG-----GATCTGTTT----AA--CTCAA--TAACACTTTGTTTT---A-CACCTCATG-AGCCGT-AA-TCT-CATCATCTCT-T-A-AT-GTCAGCAATG--GAA-CTA------CATATAC-A--GT-AT-TC-ATG-TCCAAAATTTGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GA-AA-CCA-GGAA-G---T--CAGCAATTT-T-AA-CCAC-TA--ACTAA-TAGTT-TCGC---A-AGGGTTAA-ATAATT--GG-----AACT-CTTCA---A-T-T-ATTC-TTTG--ATTATA-T-CTCAGCCACTC-A-GAAGTAT-GGGAAGAG-AGGC-CTATGCTA-TTT-A--CAAC-TA-TA-TAC-TA-GTAT-A-TTCCA-A--AAGTGGAA-GTTGTC-------------------ATGGCCCCTCA------TC-TC---TT-GC--T-CAT-----AGGG-AAT-C-GT-CTCGGAATTGGTTTA---TT--A----C-AC---GT----A--TAAG-C-CG-AAGAGC-TAGA---TTCGA---A-TGGCA-TTGTAT--ACTTG-CAGGGGTGTTCAAA--TG--CTGCAA--AGGAAT---CAATTATCA-G-----C--ATC--CTCTTTTCATAAATATGAA-AA-TT--TC---A-GTCTG-ATG-AA--TTCAG-A-GGG-T----TTT-GTT-TCGGAAAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-ATTTGCA-A-TAAAGAT-AACACCTA-G
gi|8 : cTATAGATT-TGTTTTTAA-CA---GAAG-GAT-GT-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATC-T-A------G-TT-TCAAATTTTGG-G-A-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-AGA-TTC-AA--CA--------T-CTGA-CAC-------------T--GTG-----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAC-ACTTTGTTTT---A-CACCTCATA-AGTCGC-AA-TTT-CATCATCTCT-T-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAT-GCA-GGAA-G---TC-CAGCAATTC-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGG-TAAA-ATAATT--GG-----AACT-CTTCA---AGT-T-A-TA-TTTG--A-TATA-T-CTCAGTCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATC-A--C-AC-TC-TA-TGC-TA-GTAT-A-TTCCA-AC-AAGTGGAA-GT--TCATGTAGGGGAGGGTGCTGAGTGGCCCCGAACGATGTTG-CCAGTTT-GC--TCCAT-----TGGGAAATGC-GT-CT--GAATGGC-CTAAATTC--AGCTCC-CT---GT----A--TAAGCCACGAAAGAG
gi|9 : a-TA-GTAT-A-TTCCA-ACCAAGTGGGA-GT--TC-------------------GTGGCCC-TCA------TCGCC---TT-GCATT-CAC-----AGGGAAAT-G-CT-CT--GAATTG--CTA---TT--A----C-AT---GT----AAACAAGCC----AAGAGC-TAGA---TTCGACGCA-T-GCA-TT--AT--ACTG--CAGGGGTTT-CAAAAATGGCCTGC-A--AGGAA----CAATTA--A-G---C-CCCATC--GTTCTTC--T-AAT-CGAA-AATT----C---ATGTCTGGATG-A---TTCAG-A-GGGCTCTTTTTT-GTTGTCGGACAAATT-TT--AAG-----TCT-----------------AA---T-----------------GA-A-TTGCA-AATAAAG-T-AACACCTA-GAACC-AT-A-----T-GATTCTTTG-TG-TAT-AAG-A-T-A-T-G--AT-TT-CGCT--------AGACAATT-TCTATT-AA-T--AATTTGAGGT--G-A-TTCGAGA-TTTA-CACT-GTAG-A-CAC-T-T--AACATCCCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A--ATAT-TTCTAG------TA-C--------A----------A--------A---C---TAATT--TCTT--AATATCA-CGTGA--G-AC--T--ATGACCACTA-C-A-ACATCTT-GGC--A-TA-TC-AA-A-ATAT-GTAA-CA-T-TG-G-AAA-AAGATTTTA-A-A--AAAGTCC-TG--AA-CTA--A-TATTG-----A-A--T------TAATATTTC-A--T--T-GACCCCGTACGT-CT--C-AGTACTTAC-T---CCGG-GTACTTTG
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): AATAAATAATCATCTAATCTGTTTTTTTTGGTTTAATGTAAGCTATCGCAAGACGTTATCTCGGCCTACGGTATTCAAATTTACTTTATTCTTGT
Unaligned ( gi|34 ): TGTTAACTTACCATGTATAGTTCTTTCTGGTGCACACACCTCAATTGTTTGATTTCCAGAATCGTTTATCACACAATGATATTTAAT
Unaligned ( gi|39 ): TTTTATCATTGTAAGCGTGCGATGAAATTGACGAATTATTTTGT
Alignments
lowQualScore : 222 222222222222222 111 111 44444444444444444444 111111 1 11111111 1111111111111 22222 111111111 22222 1111 111111 2222222222222222222 111111 1111 111 222 1 1111111111111 1111111 11111 5555555555555555555555555555555555555555 11111111 1 111111 2222222222222222222222222222 111111
lowQualScore : 66 3 666 222 3 3 88 3 555555555555555 777 3 000 3 88888888888888888888 2 2 2 2 2 2 5 111111 2 2 5 2 2 2 2 8 1 5 2 33 6666 8 555 5 3 3 444 44444444 3 3 6666666666666 44 44444 3 222222222 22222 0000 44 77 3 88 555 3 3 3 7 3 4 444 3 3 44 3 888888 0 3 66 3 3 3 77 3 3 6 555 6666 44 3 3 44 6 0 2 33 3 3 3 5 000000 2 2 2 2 33 2 5 2 66666 3 5 33 77777 2 888 2 8 2 33 5 8 0 3 3 3 3 3 44 3 3 3 3 3 3 3 3 3 3 3 44 5555555555555555555 000000 3 555 3 8888 77777 3 3 3 44 0 3 555 77 7777 3 555 6666 44 2222 3 7 666 000 3 3 3 55 333 3 4 55 55 4 55 777 0 5555555555555 55 7 1 1 2222222 0 6 3 44 3 3 7777 3 3 3 3 44 6 11111 9999999999999999999999999999999999999999 3 3 3 3 3 3 77 3 88888 3 3 7 3 444 777777 3 33333333 3 3 44 6 3 3 3 6 1 3 3 3 3 5555 2 88 3 77 3 3 2 2 2 2 222222 2 4444444444444444444444444444 444 444 5 33 33 4 4 33 2 33333 4444 2 4 4 2 2 55 2 2 2 2 6 2 4 2 2 444 2 222222 2 4444 2 2 33 2 33 4 4444 2 888888888 666 33 22 2 4 2 2 33 2 55 2 333 33 2
lowQualScore : .. . ... ... . . .. . ............... ... . ... . .................... . . . . . . . ...... . . . . . . . . . . . .. .... . ... . . . ... ........ . . ............. .. ..... . ......... ..... .... .. .. . .. ... . . . . . . ... . . .. . ...... . . .. . . . .. . . . ... .... .. . . .. . . . .. . . . . ...... . . . . .. . . . ..... . . .. ..... . ... . . . .. . . . . . . . . .. . . . . . . . . . . . .. ................... ...... . ... . .... ..... . . . .. . . ... .. .... . ... .... .. .... . . ... ... . . . .. ... . . .. .. . .. ... . ............. .. . . . ....... . . . .. . . .... . . . . .. . ..... ........................................ . . . . . . .. . ..... . . . . ... ...... . ........ . . .. . . . . . . . . . . .... . .. . .. . . . . . . ...... . ............................ ... ... . .. .. . . .. . ..... .... . . . . . .. . . . . . . . . . ... . ...... . .... . . .. . .. . .... . ......... ... .. .. . . . . .. . .. . ... .. .
lowQualScore : 55 6 444 333 6 6 66 6 555555555555555 999 6 000 3 44444444444444444444 9 9 9 9 9 9 7 111111 9 9 7 9 9 9 9 6 4 7 9 99 1111 6 000 7 1 1 888 22222222 1 1 9999999999999 22 66666 1 333333333 00000 4444 66 99 3 88 888 3 3 6 3 6 5 666 1 1 22 1 888888 7 1 55 1 1 1 33 1 1 2 444 5555 22 1 1 22 2 4 9 99 0 1 1 7 888888 9 9 9 9 99 9 7 9 55555 6 3 99 11111 9 999 9 6 9 99 7 6 8 1 3 3 3 3 66 3 3 3 6 3 3 3 3 3 3 3 22 8888888888888888888 555555 6 888 3 3333 77777 1 1 1 22 4 3 888 99 1111 3 444 5555 22 8888 1 3 444 000 6 6 6 00 777 3 4 00 00 0 55 000 8 0000000000000 00 3 0 3 4444444 7 7 3 66 3 3 1111 3 3 3 3 66 7 77777 5555555555555555555555555555555555555555 3 3 3 3 1 1 99 3 33333 3 6 3 6 999 777777 6 22222222 3 3 66 7 3 3 3 7 0 3 3 3 3 1111 0 99 3 22 1 1 9 9 9 7 333333 7 7777777777777777777777777777 777 555 3 77 22 7 7 11 2 55555 7777 2 4 4 2 2 33 2 2 2 2 7 2 4 2 2 333 2 555555 2 6666 4 4 22 4 11 4 7777 2 111111111 555 11 99 1 4 2 2 11 2 33 2 999 11 2
consensus : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--A-G---C-C--ATC--GTTCTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
Reference ( family-2307 ) : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--A-G---C-C--ATC--GTTCTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|1 : TATATT-GTATTTTAA-CATTTAAAGAG-T-GG-AA--CCA-TTT---------------AATCTCTTCTTT----CATGACGTGGGTGTG-T-GTGATGGGGGGCTGT---AA-GGT--TACAATCCT-GA-T-A-TCG-TACTTT-CAAATT-T-A------G-TTATCAAATTTTGT-A-G-TCAA-T-TT-ATTTC-A-TGTCACTATCCAA-TAT----AGC---GAAA-CGA-TTCCAA--CA--------T-CTAA-CAC-------------T--ATA-----TTGAT----------TCTCTT----GATC-GCTCCTCCAA--CTCAAC-TAA-ACT--GTTTT---A-CACCTCATG-AGCCAC-AA-TCT-CATCTTCTCTTA-A-CT-GTCAGCAATG---AA-CTAAGTTATCATATGC-AT-GT-ATTGT-ATGTCCTAAAAA-TAA-TAGGA-TATAA---GA----GAGCA-GTAG-CCCACGTT---AA--GATAAACCA-GGAA-GACGTCGTAGCAAATTAT-AA-C-AC-TA--ATAAA--AG-T-TCTC---ACAGGATAAA-A--ATT---------AACTC-T-CA---ATT-TA-TA-TTGA--A-TATA--CTCAGCTACTC-A-GAA-TATAGG-AAGACCCAGCACTATGCAA-GTTGA--T-AC-TAGTAATAC-GA-GCAT-A-TTCCA-AC-AAGTGGGACGT--TC-------------------GTG--CCCTCA------TC-CC---TT-GC----CAT-----AGGAAAAT-CAGT-CT--GAATTAG-CTA---TTTTA----T-ATTCTGT----A--TATACA-T---AGAGCATAAAGATTTCGAC--A-T-GCA-TTTTATTTACTG--CAAGGTTTTTCAA---TG--CTGT-ATAAGGAATTCCCAATTA--A-AGCTC-T--ATTCTGTTCTTTCATTAATATGAACAATTTCATC---GCGT----ATG-AA--T-CAG-A-GGGCT----TTTTGTT-TCGGACAA-TT-AT--A-G-----TCTAA---------------AA---T-----------------GACA-TTGCA-A-TAAAGATAAACACCTACGAAC--AT-ATTTATT-GGTTATTTC-TT-TATGTAG---TCA---G--AT-TTCCGCTTACTGCACAGATTATG-CTTATTTAA-TGAAGTTTGAGGT-GGCA-TTCGA-ATTTTA-CACTGGTAG-ATCATAT-ATTTACAT-CCTAAAAATCA-TTATTATCCT-G-TCA-AA-C-CATAT-TTCTAG------TA-C--------A----------A--------AATTC-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-CAA-ACA--TT-GGC--ATTA-TC-AAGATAT-G-GAGA-AATT-TG-A-AAA-AAAG---T--T-A--AAAGT-C-TGGAAG-CTT--A--TGTG----AG-G--TAGTTTATAA---TTCAA--TAGT-GACCCCGT-C-TGCT--C-AGTATC--G-T---C--A---ACTTT
gi|10 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GG-AA--CCA-TTT-------------G-A-TCTCTTCTTTTTT-CA-GACGT---TTTA-T-GTAATG--------------------TACATCCTT-GAAT-A-TCGGTACTTTTCATAAT-T-A------G-TT-TCAAATTTTGT-GGA-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-CTAAGAAA-CGAATTC-AA--CA--------T-CTAA-CA--------------T--ATA-----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAA-AACTGGTTTT---A-CACCTCATGGAGCCAC-AA-TCTTCATCTTCTCT-A-A-CT-TTCCACAATG--GAA-CTA------CATATGC-AT-GT-AT-GTTATGTTCTAAAA--TAT-T-GGAATATAG---GT----GA----GTAG-C--AAGTTTT-AA--GATAA-CCA-GGAAAG---AC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TTGCGGCA-GGGATAACCATAATT--GG-----AACTC-TTCA----GT-TA-TA-TTTG--A-TATATGCTCAGTCAGTCCA-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TT-AA-TAC-TA-GTAT-AATTCCA-AC-AAGTGGGA-GT--TC-------------------TTGGCCCTTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTG
gi|11 : gTATAG-CT-GTTTTT--A-CA---GAAG-GCT-GG-AA--CCA-TTTCTGAGCACACAACG-AA-ATCTTCTTTT---CA-GACGT---TTTAATTGTAA-GC----CTATAG-GA-GAAGTTACATCCTTAGA-T-AGTCGGTACTTT-CAAATT-TCAC-----A-TC-TCAAATTTTGG-G-A-T-AA-T-TT-ATTTTTA-C-TCATT--CCAAATAT----ATC---GAAA-CGA-TTC-AA--CA--------T-CTAAACAC-------------T--ATACT---T-GAT---------CTCTTTG----AATCTGTTTT---AA--CTCAA--TAA-ACTGTGGTTTCTAA-CCACTCATG-AGCCGCCAA-TCT-CATC-TCTCT-AGA-CT-GTCAGCAATG--GAA-CTA------CATATGC-ATTGT-AT-GT-ATGTTCTAAAA--TAT-T-GGC-TATAG---AT----GA--A-GTAGGC--A-GGT---AATGAACAA-CCA-GGA--G---TC-CAGCAATTT-TGAA-CCACCTA--ATAAACTAG-T-TCGC---A-AGGTTAAA-ATAATT---G-----AACTC-TTCA---AG--TA-TA-TTTGACA-TATAT-CTCAGTCACTC-A-GACGTATGGGAAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-
gi|12 : aC---A-AGGTTAAA-ATAATT--GG-----AACTC-TTCA---AGT------------------AT-CTCAGCCACTC-A-GAAGTATGGGGAAGAAGAGGC-CTATACTA-ATT-A--T-AC-TA-TA-TA---A---AT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCCTCA------TC-CC---TC-GC--T-TATAGGGAAGGGAAAT-C-AT-TT--GAATTGG-CTA---TT--A----C-AC---AT----A--TAAG-C-CG-AAGAGC-TAGA-----------------------AT--ACT-G-CAGGGG-CTTCAAA--TG--CTGC-A--GGGAAT---CAATGA--A-G---C-C--ATT--GTTCTTTCAT-AATATGAACCATTT--T----ATGTCTG-ATGAAA--ATCAG-A-GGTCG----TTT-GTT-TCGGACAA-TT-TT--A-GTCCTATCT-----------------AAACCTCTTGGAAAA--------GA-A-TTGCA-A-TAAACAT-AACACCTA-TAGC--AT-A-----T-AATTTTTCG-CG-TAC-TAG-A-TTA-C-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GA-A-TTCGA-A-TGTA-CACT-GTAG-ATCAT-T-C--AAC
gi|13 : GAAC---CAATTA--A-G---C-C--ATT--GTTCTTTCAT-AATATGAACCATTA---C---AAGGCTG-ATG-AA--TTCGG-A-GG------------CT-AAGGACAA-TT-CT--A-G-----TCTTATTCAAACCTCCTGGAAA---A-----------------GA-A-TTGCA-A-TAAACAT-AACTCCTA-GAGC--AT-A-----T-G
gi|13 : AAATAA-AGG-GGT-CT-GTTTG-AA-A-CACAT-TTCTAGAACTAGTA-C--------A----------ATGTATTAAA---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGGC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CG-T-TG-A-AAATA------TG-T-A--AAAGT-C-TG--AA-CT---------------------------------TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaataaaggggtctgtttgaaacacatttctagaactagtacaatgtattaaacataattcttcatatcacttagacatatggcacaacatttggcatatcaaatattgtaacgttgaaaatatgtaaaagtctgaacttttaattgaccccgtctctcagtactctcagtactttgat
gi|14 : gaaccaattaagccattgttctttcataatatgaaccattacaaggctgatgaattcggaggctaaggacaattctagtcttattcaaacctcctggaaaagaattgcaataaacataactcctagagcatatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttt-TTGTAATGC----CTTTCGCAA-G----TACATCCTT-GT-T-A-ACGGTACTTT-CAAATT-T-ACCGACAG-TC-ACAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGCCATT--CCAAATAT----A-C---GAAA-CGA-TTT-CA--CACTATACAGT-TTGA-TACGTTAATACTCATTT--ATA-----T-GAT---------CTC-TTT----GGTCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCCCATG-AGCCGC-AA-TAT-CATCATCTAT-G-A-CT-GTCAGCAATG--GAA-CTA------CATA--------T-AT-GT-GTGTTCTAAAA--TGT-T-GGA-TATAGCAAATATAAGA--T-GTAG-C--A-GTTTT-AA--GATAA-CCAGGGAA-G---TC-CAGCCATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-A
gi|15 : gATGAACCATTT--CTTGAAAGGCTG-ATG-AA--TT-----------------T-GCC-AAGGACAA-TTATTCAA-A-----CCTCCTGGA-----------AA---A-----------------GA-A-TTGCA-A-TAAACAT-AGCACCTA-GAGC--AT-A-----T-GGTTTTTTG-TG-TAC-TAG-A-TTA-TAG--TT-TTTCACT--------AGACAATT-CCTATTTCC-C--AATTTGAGGT-GG-A-TTCGA-A-TGTA-CACT-GTTG-ATCAT-TCA--AAC-T-TCT-AAAATAA-AGA-GGT-CT-GTTTG-AA-A-CATAT-TTCTAG------TA-CAGTGTATTA----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-------GAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT---------------------------------------------TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-TACCCCGT-C-T-CT--C-AGTACT--A-----C--A-GTACTTTGATT
gi|16 : TTTTTAA-CA---GAAA-GAT-GG-GA--CCA-TGT-------------G-AATCTCTTCTTTTTT-CA-GAAGT---TTTA-TTGTTTTAT----TTTTCGTAA-G----TACATCCTT-GA-T-A-TCGGTACTTT-TAAATT-T-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATATTATAA-C---GAAA-CGA-TTC-AT--CA--------T-CTAA-CAC-------------T--ATACTGTTT-GGTACGTTAATACTCCTTTATATGATATCTTT----AA--CTCAA--TAA------GTTTT---A-CACCTCATG-At
gi|17 : tgAT-AACACCTA-GAGG--AT-A-----T-GATTTTTTT-TG-TAC-TA--A-TTA-T-ATAAT-TTTCGCT--------A-ACAATTCTCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-AGTGTAACAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA--GA-GAT-CTTGTTCG-AA-AACATAT-TTCTAG------TAAC--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGCGGA-TA-TC-AA-ATAT-T--TAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-TT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnngaggggaagtaatttattttactgcattggcgctttttttgtcctatgaat
gi|18 : TT--CATATCAAC-TTA--G-ACCAT--G-GAC----AAC-ATACAT-TT-GAC--A-TA-TT-CA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TGTT-ATTAAAGT-C-TG--AC-ATT--C-TTTTGCATTAA-AATT------TAA------AA--T--G-GAACCCGT-C-T-TC--C-GGCGGT--C-TTTCC--G-GTACTTTG
gi|19 : ccggaaaaataaggtttacatgcacgtgcctacatCTAT-G-A-CT-GTCAGCAATG--GAAACTA-----------------------GT----TTCTAAAA--TGTCT-GAA-T---G---AT----GA--A-GTAG-C--A-GTTTTTAA--GATAC-ACA-TAAA-G---TCTCAGCAAGTT-T-AAACCAC-TA--GTAA--TAG-T-TCGC---A-AGGGTAAA--TAAT---GG-----AACTCCTTTA---AGT-TAATA-TTTG--A-TATATTCTCTGCC-CTC-A-GAGGTATGGGGAA-AGCAGGC-CTATGCTA-ATT-A--T-ACTTA-TA-TAC-TAGGTAT-A-TTCCAGAC-AAGTGGGA-GT--Tgaatttgtagttgaaccaagctcaacgtaatccatataatccattggagacgcaagcacctcaat
gi|2 : TT-GTTTTTAAA-AA---GGAA---T-AG-AAAACCA-TT--------------G-AATCTCTT-TTTTT--CA-GACGT---TTTA-TTGTAATGC-----TATCG-AAAG----TACATC-TT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TTAATTTTTGTTG-A-T-AAAT-TT-ATTTTTA-TGTC------CAAATTT----A-C---GAA--CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--GTAA----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TCA---CTTGTTTT---A-CACC--ATG-AGCCGC-AA-TC--CATCATCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TG--T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-------TAA-TC---GA-----------------T-T-AA-CGAC-GA--ACTAA-TAGAT-TCGC-----AGGTTAAA-ATAATTTCGAAATCTAACTA-TTCAGCCAGTGTA-TA-TTCG--ATTATAT-CT-AACC-CTC-a
gi|2 : --TC-------------------ATGGCCCCTCA------TC-CC---TT-GT--G-TAT-----TGGGAAAA-C-GTGCT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCA--G-AA-AGC-TAGA---TTCGA---A-T-GCT-TTTTAT--ACTG--CAGGGGTTT-CAAA--TG--CTGC-A--AGGAAT---CA-TTA--A-G---C-C--ATC--GTTCTTTCAT-A-TATGAACAATTT---C---ATGTCTG-ATG-AA--TTCAG-AGGGGCT----TTT-GTT-TCGGAAAA-GT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCACA-T-AAGAT----ACCTA-GAGCATAT-A-----T-GA-CTTTTG-TGTTAC-TAGAA-TTA-T-A--A--TTTCGCT--------AGAC-ATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCG--A-TGTA-CA-T-GTAATATCAT-T-A--AACATACCT-AAAATAA-AGA-AGA-CT-GTTCG-AA-A-CATTA-TTCTAG------TA-C--------A----------A--------A---C----AA-TTATCTT--CATATCA-CTTTA--G-AC-A---ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATATAT-GTAA-CA-A-TG---AAA-A------TG-T----AAAGT-C-TG---A-CTT--A-TTTTG----AA-A--T------TAA---TTC-A--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggatatcatggcccctcatcccttgtgtattgggaaaacgtgctgaattggctattacacgtataagcagaaagctagattcgaatgctttttatactgcaggggtttcaaatgctgcaaggaatcattaagccatcgttctttcatatatgaacaatttcatgtctgatgaattcagaggggcttttgtttcggaaaagtttagtctaatgaattgcacataagatacctagagcatatatgacttttgtgttactagaattataatttcgctagacatttctatttaataatttgaggtgggattcgatgtacatgtaatatcattaaacatacctaaaataaagaagactgttcgaaacattattctagtacaaacaattatcttcatatcactttagacaatgacacaacatttggcatatcaaatatatgtaacaatgaaaatgtaaagtctgacttattttgaaattaattcattgaccccgtctctcagtactctcagtactttgatttc
gi|20 : ttgtttttaaaaaggaatagaaaaccattgaatctctttttttcagacgttttattgtaatgctatcgaaagtacatcttgatatcggtactttcaaatttagttttaatttttgttgataaatttatttttatgtccaaatttacgaacgattcaacatctaacactgtaatgatctctttgatctgtttaactcaatcacttgttttacaccatgagccgcaatccatcatctctaactgtcagcaatggaactacatatacatgtatgtatgtcctaaaatgtggatatagatgaagtagcagtttttaatcgattaacgacgaactaatagattcgcaggttaaaataatttcgaaatctaactattcagccagtgtatattcgattatatctaaccctcttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggata-TCTATTTAA-T--AATTTGTGGT-GG-A-TTCGA-A-TCTA-CACA-GTAG-ATCAT-T-A--AA-----------------GA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATAACA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-AGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTtc
gi|21 : TT--GTTCTTTCAT-AATATGAACCATCT---C---ATGTCTG-ATG-AA--TTCAG-A-GGGCG----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------TA---TTTAAACCTCTTGGAAAAGA-A-TTGCA-A-TAAACAT-AACATCTA-GAGC--AT-A-----T-AATTTTGTG-TG-TAC-TAT-A-TTA-C-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GG-A-TTCGA-A-TATA-CACT-GTAG-ATCAT-T-C--AAC
gi|22 : G-AA-A-CATAT-TTCTAG------TA-C--------AGTGTATTAAAA--------A---A-A-TAA-T--TCTT--CATATCA-C-TTA--G-AT-TC--ATGAC----A-C-A-AAAT-TT-GGC--A-TA-TT-AA-ATAT-T-GCAA-CA-T-TG-T-AAA-A------TA-T-A--AAAGT-C-TG--AA-CTT--A-TTTTA----AA-A--T------TAA---TTTAA--T--T-GACCTCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGAT
gi|23 : atgtcattgttataccaaaagaaggaagggaagaagatAT-CT-GTTCG-AA-A-CAT-T-TTCTAT------TA-C--------A----------A--------A---C-AATAA-T--TC-----ATATCAGC-TTGAGG-AC-AA--ATGAC----A-C-AGACAT-TTTGGC--A-TAATC-AA-ATAT-C-GTA--CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CCTTAA-TTTTG----AA-AT-T------TAA---TTCAACTT--T-GACCCCGT-C-T-CT--CAAGTACT----T---C--ATGTACT
gi|24 : aagcaatA-G---TC-CAGCAATTT-T-AA-CCAC-TA--GTAAA-TAG-T-TCGC---A-AGGTTAAA-ATAACT--GG-----AACTC-TTTA---AGT-TA-TA-TTTG--A-TATAT-CTCTGCCCCTC-A-GAGGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------gat
gi|25 : AATGC----CTATCGCAA-G----TACATCCTT-GA-T-A-TCAGTACTTT-CAAATT-C-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-Ca
gi|26 : tatctactcttttttgcagaagtttttatgtnnnnnnnnnnnnnnnnnnnnnnnnn----TACATCGCT-GA-CGA-TCGG-ACTTT-CAAATT-T-A------GTTT-TCACA-TTTGT-G------A-T-TA-ATATT-A-TGTCATT--CCAAATAT----AGC---GAAA-CGA--TC-AA--CAC-------T-CTAA-CAC-------------TTCATA-----T-GAT---------CTC-TTT----GATCTGTT
gi|27 : gaatga---GT----A--TAAGCC--G-AAGAGC-TAGA---TTCGA---A-T-GCT-TTTTAT--ACT-G-TAGGGG-TTTCAAA--TG--CTGC-A--
gi|28 : tacttgcgagacactgacatacatatcctctctccctnnnnnnnnnnnnnnnnnnnnnnnnnctAT-TTTTAAATT---TA-T--------G----------G--------G---C-A-TAA-T--TCTTTTCATA-CA-C-GTA--G-A--ATTCATGAC----A-C-A-CCAG-TT-TGC--A-TA-TC-AA-ATATAT-GTAA-CA-T-TG-GTAAA-A------TG-TAA--AAAGT-C-TG--AACCTT--A-TTTTG----AACA--T------T
gi|29 : TAA-AGA-GGT-AT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------ACTGTTTTA--A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-GTAT-TT-GGC--A-TA-TC-
gi|3 : ctacccagtttgcatTATAGATTTGTTTTGTAA-CA---GAAG-GGT-GG-AAA-CCAATTT-------------GGAATCTCTTCTTTTT--CA-GACGTA--TTTA-TTGTAATG--------------------TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-TTA------G-TT-TCAAATTTT-T-G-A-T-AA-T-TTTATTTT-AATGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-A---CA--------TTCTAA-CAC-------------T--ATAATTA-T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAA-ACTGTGTTTT---A-CACCTCATG-AGC-AC-AA-TCT-CATCTTCTCT-A-A-CT-GTCAGCAATGCGAAA-CTA------CATATGCCAT-GTTAT-GT-ATGTTCTAAAA--TAT-T-GGA-TATAG---GT----GA--AGGTAG-C--A-G-TTT-AA--GTAAA-CCG-GGAA-G---AC-CAGCAA-TT-T-AA--CAC-TAATATAAA-TAG-TGTCGC---A-AGGG-ATA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TATTTTG--A-TATAT-CTCAGTCACTC-AGGAAGTATGAG--AGAGCAGGC-CTATGC-A-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTTCC-AC-AAG-GGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--TCCAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TTA-A----CAAC---GT----A--TAAGCC-CG-AAGAGCTTAGA---TTCGA---A-T-GCA-TTTTA---ACTAGCCAGGGGTTT--AAA--TG--CTGC-A--AGGGCT---CA-------------------------CTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAGAA-GGGCT----TTT-GTT-TCGGACAA-TT-TT--ATG-----T-T-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAAC--AT-A-----TAGATTTTTTGTTGCTAC-TAG-C-ATATT-G--ATATTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-TCC-TAAATAATAGA--AT-CT-GTTCGAAA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-C-TAA-T--TCTT--CATATCA-C-TTA--G--C-AT--ATGAC----A-C-A-ACAT-TT-GGCA-A-TA-TC-AA-ATAT-T-GTAA-CA-T-TGAA-AAA-A------TG-T-A--AAAG--C-TG--AA-CTT--A-TTTTG----AA-A---------TAA---ATCAA--C--T-GACCCCGT-C-T-CTTCC-AGTACT--C-T---C--A-GTACTTTGATT
gi|30 : -AA--GATAA-CCA-GGAAAG---TT-CGGTAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGT---A-AGGTTAAA-ATAATT--GG-----AACTA-TTCA---AGT-TA-TA-TTTG--A-TATAT-TTCAATCA
gi|31 : C---TT-GC--T-CAT-----AGGGAAAT-C-AT-CT--GAATTGG-CAA---TT--A----C-AC---GTATACA--TAAG-C-CG-AAGAGC-TAGA---TTCAA---A-T-GCA-TTTTAT--ACT-G-CAGGAG-CTTCAAA--TG--
gi|33 : TA--G-AC-CC--ATGAC----A---A-ACAT-TT-G-C--A-TA-TC-AA-ATAT-TTATAAACA-T-GC-G-AAA-A------TG-T-A--AAAGT-C-TG--TA-ATC--A-TTTTT----AA-A--T------TAA---GTTAA--T--T-GACCC
gi|35 : -ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--ATAGT-C-TT--AA--TT--A-CTTT---------------------------AA--T--T-GACCATGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTG
gi|36 : CTAT-G-A-CT-GTCAGCAATG--GAA-TTA---------------------------TGTTCTTAAA--TGT-T-GGA-TATAG---AT----GA--A-GGAG-C--A-GTTTT-AA--AAT
gi|37 : cgT--CATATCA-C-TTA--G-AC-AC--ATGAC----A-CAA-ACAT-TT-GAC--A-TA-TC-AC-ATA----GTAATCG-TATG-G-AAG-G------TG-
gi|38 : TT--A-TTGTG----AA----T------TAA---TTCAA--T--TAGACCCCGT-C-T--T--C-AGTACT--CTT---C--A-GTACTTTG
gi|4 : TATAGATT-GTTTTTTAA-CA---GAA----T-GA-AA--CCA-TTT-------------G-AATCTCTTCTTTTTTCCA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-AATTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-A---CA--------T-CTCA-CAC-------------T--GTA-----T-GAT---------CTCTTTT----GATCTGTTT----A---CTCAA--TAC-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AAATCT-CATCATCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTA-AA--GAATA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TT-G--A-TATAT--TCAGCCACTC-A-AAAGTATGGGGAAGAACAGGC-CTATGCTT-ATT-A--C-AC-TA-TA--AC-TA-GTAT-A-TTCCA-AC-AAGTGGAA-GT--TC-------------------ATGGCCCAT-A------TC-C----TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--AAAT-GG-CTA---TT--A----C-A----GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---C-ATTA--A-G---C-A--ATC--GTTCTTTCAT--ATATAAACAATTT--TC---ATGTCTG-ATA-AAATTCCAG-A-GGGTT----TTT-GTT-TCGGAAAC-TT-TT--T-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GATC--AT-A-----T-GATTTTTTG-TG-TAC-TAC-A-TTA-T-A--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GA-A-TTTGA-A-TGTT-CAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-G--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|40 : AT-----AGCGAAAT-C-AT-TT--GAATTGG-CTA---TT--A----A-AC---GT----A--TAAG-C-CG-AA
gi|41 : --T--T-GAACCCGTTC-T-CT--C-AGTACTT-C-T---C--A-GTACTTTGATT
gi|42 : --T-GACCCCGT-C-T-CT--C-AGCACT--C-T---C--A-GTACTTAGA
gi|5 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GGGAA--CCA-TTT-------------G-AATCTCTTCTTT----CA-GACGT---TTTA-TTGTAATG--------------------TACATC-TT-GA-T-A-TCGTTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGTTG-A-A-AT-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTGTT----GATCTGTTT----AA--CTCAA--TAA-AC--TGTTTT---A-CA-TTCATG-AGCCAC-AACTCT-CATCTTCTCT-A-A-CTGGTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--ATT-T-GGA-TATAG---GT----GA--A-GTAG-C--A-G-TTT-AA--GAAAA-ACA-GGAA-G---AC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC-----AGGAT-AA-ATAATT--GG-----AACTC-TTCAGT-AGT-TATTA-TTTG--A-TA-AT-CTCAGTCACTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTATCTT-A--T-AC-TA-TA-TACTTA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGG-AAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAG-C-CG-AAG-GC-TAGA---TTCGA---ATT-GCA-TTTTAT--ACT-G-CAGGGG-TTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--------CAC--ATC--GTTCTTTCAT-AATATGAACAA-TT--TC---GTGTCTGAATG--A--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-GT----TTT-----------------AA---T-----------------GA-A-TTGCA-A-T-AAGAT-AACA-CTA-GAAC--A--A-----T-GA--TTTTG--G-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-ATTTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT--AAATAA-AGA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---CAA-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATA--T-GTGA-CA---TG-A-AAA-A------TG-T----AACGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|6 : TATAGATT-GTTTT--AATCA---GAAG-G-T-G--AA--CCA-TT----------------AATCTCTTCTTTTC--AA-GAAGT---TTTA-TT-TAATG--------------------TACATCCT--GA-T-A-TCGGTACTTT-CAAATTAT-A------G-TT-TCAA-TTTTGT---A-T-AA-T-TTTAATTT-A-T--CATT--CCAAATAT----A-C---GAAA-CG--TTC-AAAACA--------T-CTA--CAC-------------T--ATA-----T-AAT---------CTCTTT-----GATCT--TT----AATACTCAAAATAA-AC---GTTTT---AACACCTCATG-AGCCAC-AA-TCT-CATCTTCTCT-A-AACT--TCAGCAATG---AA-CTA------CATATGC-ATAGT--T-GT-ATGTTCTTAAA--TAT-T-GGAATATAG---GT-----A--A-GTAG-C--A-GTTTT-AA--GAAAA-CCA-GGAA-A------CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T--CGC---C-AGGATAAATATA-TT--G------AACTC-T-CA---AGT--A--A-TTT---A-TAAATTCTCA-TCGCTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-AATT-AC-TA-TA-TAC-TA-GTATTA-TTCCA-AC-AAGTGG-A-GT--TC-------------------GTGGCCCCTCA------TC-CC---TTCGC--T-CAT-----AGG-AAAT-C-GT-CT--GAAT-GG-CTA---TT--A----C-AC---GT----A--TAAGCC--G-AAGAGC-TAGA---TTCGA---A-T-GCATTTTTAT--ACT-G-CAGGGG-TTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--AGG---C-C--ATC--TTTCTTTCAT-AATATGAACCAATT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACCA-AT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGC----CAAAGAT-AACACCTA-AAAC--ATAA-----T-GATTTTTTG-T--TAC-TAG-ATTTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAATT--AATTTGAGG--GG-A-TTCGA-A-TTTA-C-CT-GTA--ATCAT-T-A--AACATGCCTAAAAATAA-A-A-TAT-CT-GTTCG-AAGA-C-TATATTCTAG------TA-C--------A----------A--------A---C-A-TAATT--TCTT--CATATCA-C-TTA--GAAC-AT--ATGAC----A-C-A-ACAT-TC--GC--A-TA-TCAAA-ATAT-T--TAA-CA-T-TG-A-AAA-AG-----TG-T-A--AAATT-CATG--AA-C-T--A-TTTTG-----A-A--T------TAAT--TTCAA--T--G-AACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|7 : TAGATT--TGTTTTAA-CA---GAAG-G-TTGA-AA--CCA-TTTTT-----------G-AATTTCTTCTTTT---CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TA-ATCCTT--A-T-A-TCGGTACTTT----------------------TCAAATTTTGT-G-AAT-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-AA--CA--------T-TCTA-CAC-------------T--GTAA----T-GAT---------CTCTTG-----GATCTGTTT----AA--CTCAA--TAACACTTTGTTTT---A-CACCTCATG-AGCCGT-AA-TCT-CATCATCTCT-T-A-AT-GTCAGCAATG--GAA-CTA------CATATAC-A--GT-AT-TC-ATG-TCCAAAATTTGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GA-AA-CCA-GGAA-G---T--CAGCAATTT-T-AA-CCAC-TA--ACTAA-TAGTT-TCGC---A-AGGGTTAA-ATAATT--GG-----AACTC-TTCA---A-T-TATTC-TTTG--ATTATAT-CTCAGCCACTC-A-GAAGTAT-GGGAAGAG-AGGC-CTATGCTA-TTT-A--CAAC-TA-TA-TAC-TA-GTAT-A-TTCCA-A--AAGTGGAA-GTTGTC-------------------ATGGCCCCTCA------TC-TC---TT-GC--T-CAT-----AGGG-AAT-C-GT-CTCGGAATTGGTTTA---TT--A----C-AC---GT----A--TAAG-C-CG-AAGAGC-TAGA---TTCGA---A-TGGCA-TTGTAT--ACTTG-CAGGGGTGTTCAAA--TG--CTGCAA--AGGAAT---CAATTATCA-G-----C--ATC--CTCTTTTCATAAATATGAA-AA-TT--TC---A-GTCTG-ATG-AA--TTCAG-A-GGG-T----TTT-GTT-TCGGAAAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-ATTTGCA-A-TAAAGAT-AACACCTA-G
gi|8 : cTATAGATT-TGTTTTTAA-CA---GAAG-GAT-GT-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATC-T-A------G-TT-TCAAATTTTGG-G-A-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-AGA-TTC-AA--CA--------T-CTGA-CAC-------------T--GTG-----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAC-ACTTTGTTTT---A-CACCTCATA-AGTCGC-AA-TTT-CATCATCTCT-T-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAT-GCA-GGAA-G---TC-CAGCAATTC-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGG-TAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGTCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATC-A--C-AC-TC-TA-TGC-TA-GTAT-A-TTCCA-AC-AAGTGGAA-GT--TCATGTAGGGGAGGGTGCTGAGTGGCCCCGAACGATGTTG-CCAGTTT-GC--TCCAT-----TGGGAAATGC-GT-CT--GAATGGC-CTAAATTC--AGCTCC-CT---GT----A--TAAGCCACGAAAGAG
gi|9 : a-TA-GTAT-A-TTCCA-ACCAAGTGGGA-GT--TC-------------------GTGGCCC-TCA------TCGCC---TT-GCATT-CAC-----AGGGAAAT-G-CT-CT--GAATTG--CTA---TT--A----C-AT---GT----AAACAAGCC----AAGAGC-TAGA---TTCGACGCA-T-GCA-TT--AT--ACTG--CAGGGGTTT-CAAAAATGGCCTGC-A--AGGAA----CAATTA--A-G---C-CCCATC--GTTCTTC--T-AAT-CGAA-AATT----C---ATGTCTGGATG-A---TTCAG-A-GGGCTCTTTTTT-GTTGTCGGACAAATT-TT--AAG-----TCT-----------------AA---T-----------------GA-A-TTGCA-AATAAAG-T-AACACCTA-GAACC-AT-A-----T-GATTCTTTG-TG-TAT-AAG-A-T-A-T-G--AT-TT-CGCT--------AGACAATT-TCTATT-AA-T--AATTTGAGGT--G-A-TTCGAGA-TTTA-CACT-GTAG-A-CAC-T-T--AACATCCCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A--ATAT-TTCTAG------TA-C--------A----------A--------A---C---TAATT--TCTT--AATATCA-CGTGA--G-AC--T--ATGACCACTA-C-A-ACATCTT-GGC--A-TA-TC-AA-A-ATAT-GTAA-CA-T-TG-G-AAA-AAGATTTTA-A-A--AAAGTCC-TG--AA-CTA--A-TATTG-----A-A--T------TAATATTTC-A--T--T-GACCCCGTACGT-CT--C-AGTACTTAC-T---CCGG-GTACTTTG
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): AATAAATAATCATCTAATCTGTTTTTTTTGGTTTAATGTAAGCTATCGCAAGACGTTATCTCGGCCTACGGTATTCAAATTTACTTTATTCTTGT
Unaligned ( gi|34 ): TGTTAACTTACCATGTATAGTTCTTTCTGGTGCACACACCTCAATTGTTTGATTTCCAGAATCGTTTATCACACAATGATATTTAAT
Unaligned ( gi|39 ): TTTTATCATTGTAAGCGTGCGATGAAATTGACGAATTATTTTGT
Alignments
lowQualScore : 222 222222222222222 111 111 44444444444444444444 111111 1 11111111 1111111111111 22222 111111111 22222 1111 111111 2222222222222222222 111111 1111 111 222 1 1111111111111 1111111 11111 5555555555555555555555555555555555555555 11111111 1 111111 2222222222222222222222222222 111111
lowQualScore : 66 3 666 222 3 3 88 3 555555555555555 777 3 000 3 88888888888888888888 2 2 2 2 2 2 5 111111 2 2 5 2 2 2 2 8 1 5 2 33 6666 8 555 5 3 3 444 44444444 3 3 6666666666666 44 44444 3 222222222 22222 0000 44 77 3 88 555 3 3 3 7 3 4 444 3 3 44 3 888888 0 3 66 3 3 3 77 3 3 6 555 6666 44 3 3 44 6 0 2 33 3 3 3 5 000000 2 2 2 2 33 2 5 2 66666 3 5 33 77777 2 888 2 8 2 33 5 8 0 3 3 3 3 3 44 3 3 3 3 3 3 3 3 3 3 3 44 5555555555555555555 000000 3 555 3 8888 77777 3 3 3 44 0 3 555 77 7777 3 555 6666 44 2222 3 7 666 000 3 3 3 55 333 3 4 55 55 4 55 777 0 5555555555555 55 7 1 1 2222222 0 6 3 44 3 3 7777 3 3 3 3 44 6 11111 9999999999999999999999999999999999999999 3 3 3 3 3 3 77 3 88888 3 3 7 3 444 777777 3 33333333 3 3 44 6 3 3 3 6 1 3 3 3 3 5555 2 88 3 77 3 3 2 2 2 2 222222 2 4444444444444444444444444444 444 444 5 33 33 4 4 33 2 33333 4444 2 4 4 2 2 55 2 2 2 2 6 2 4 2 2 444 2 222222 2 4444 2 2 33 2 33 4 4444 2 888888888 666 33 22 2 4 2 2 33 2 55 2 333 33 2
lowQualScore : .. . ... ... . . .. . ............... ... . ... . .................... . . . . . . . ...... . . . . . . . . . . . .. .... . ... . . . ... ........ . . ............. .. ..... . ......... ..... .... .. .. . .. ... . . . . . . ... . . .. . ...... . . .. . . . .. . . . ... .... .. . . .. . . . .. . . . . ...... . . . . .. . . . ..... . . .. ..... . ... . . . .. . . . . . . . . .. . . . . . . . . . . . .. ................... ...... . ... . .... ..... . . . .. . . ... .. .... . ... .... .. .... . . ... ... . . . .. ... . . .. .. . .. ... . ............. .. . . . ....... . . . .. . . .... . . . . .. . ..... ........................................ . . . . . . .. . ..... . . . . ... ...... . ........ . . .. . . . . . . . . . . .... . .. . .. . . . . . . ...... . ............................ ... ... . .. .. . . .. . ..... .... . . . . . .. . . . . . . . . . ... . ...... . .... . . .. . .. . .... . ......... ... .. .. . . . . .. . .. . ... .. .
lowQualScore : 55 6 444 333 6 6 66 6 555555555555555 999 6 000 3 44444444444444444444 9 9 9 9 9 9 7 111111 9 9 7 9 9 9 9 6 4 7 9 99 1111 6 000 7 1 1 888 22222222 1 1 9999999999999 22 66666 1 333333333 00000 4444 66 99 3 88 888 3 3 6 3 6 5 666 1 1 22 1 888888 7 1 55 1 1 1 33 1 1 2 444 5555 22 1 1 22 2 4 9 99 0 1 1 7 888888 9 9 9 9 99 9 7 9 55555 6 3 99 11111 9 999 9 6 9 99 7 6 8 1 3 3 3 3 66 3 3 3 6 3 3 3 3 3 3 3 22 8888888888888888888 555555 6 888 3 3333 77777 1 1 1 22 4 3 888 99 1111 3 444 5555 22 8888 1 3 444 000 6 6 6 00 777 3 4 00 00 0 55 000 8 0000000000000 00 3 0 3 4444444 7 7 3 66 3 3 1111 3 3 3 3 66 7 77777 5555555555555555555555555555555555555555 3 3 3 3 1 1 99 3 33333 3 6 3 6 999 777777 6 22222222 3 3 66 7 3 3 3 7 0 3 3 3 3 1111 0 99 3 22 1 1 9 9 9 7 333333 7 7777777777777777777777777777 777 555 3 77 22 7 7 11 2 55555 7777 2 4 4 2 2 33 2 2 2 2 7 2 4 2 2 333 2 555555 2 6666 4 4 22 4 11 4 7777 2 111111111 555 11 99 1 4 2 2 11 2 33 2 999 11 2
consensus : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--A-G---C-C--ATC--GTTCTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
Reference ( family-2307 ) : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--A-G---C-C--ATC--GTTCTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|1 : TATATT-GTATTTTAA-CATTTAAAGAG-T-GG-AA--CCA-TTT---------------AATCTCTTCTTT----CATGACGTGGGTGTG-T-GTGATGGGGGGCTGT---AA-GGT--TACAATCCT-GA-T-A-TCG-TACTTT-CAAATT-T-A------G-TTATCAAATTTTGT-A-G-TCAA-T-TT-ATTTC-A-TGTCACTATCCAA-TAT----AGC---GAAA-CGA-TTCCAA--CA--------T-CTAA-CAC-------------T--ATA-----TTGAT----------TCTCTT----GATC-GCTCCTCCAA--CTCAAC-TAA-ACT--GTTTT---A-CACCTCATG-AGCCAC-AA-TCT-CATCTTCTCTTA-A-CT-GTCAGCAATG---AA-CTAAGTTATCATATGC-AT-GT-ATTGT-ATGTCCTAAAAA-TAA-TAGGA-TATAA---GA----GAGCA-GTAG-CCCACGTT---AA--GATAAACCA-GGAA-GACGTCGTAGCAAATTAT-AA-C-AC-TA--ATAAA--AG-T-TCTC---ACAGGATAAA-A--ATT---------AACTC-T-CA---ATT-TA-TA-TTGA--A-TATA--CTCAGCTACTC-A-GAA-TATAGG-AAGACCCAGCACTATGCAA-GTTGA--T-AC-TAGTAATAC-GA-GCAT-A-TTCCA-AC-AAGTGGGACGT--TC-------------------GTG--CCCTCA------TC-CC---TT-GC----CAT-----AGGAAAAT-CAGT-CT--GAATTAG-CTA---TTTTA----T-ATTCTGT----A--TATACA-T---AGAGCATAAAGATTTCGAC--A-T-GCA-TTTTATTTACTG--CAAGGTTTTTCAA---TG--CTGT-ATAAGGAATTCCCAATTA--A-AGCTC-T--ATTCTGTTCTTTCATTAATATGAACAATTTCATC---GCGT----ATG-AA--T-CAG-A-GGGCT----TTTTGTT-TCGGACAA-TT-AT--A-G-----TCTAA---------------AA---T-----------------GACA-TTGCA-A-TAAAGATAAACACCTACGAAC--AT-ATTTATT-GGTTATTTC-TT-TATGTAG---TCA---G--AT-TTCCGCTTACTGCACAGATTATG-CTTATTTAA-TGAAGTTTGAGGT-GGCA-TTCGA-ATTTTA-CACTGGTAG-ATCATAT-ATTTACAT-CCTAAAAATCA-TTATTATCCT-G-TCA-AA-C-CATAT-TTCTAG------TA-C--------A----------A--------AATTC-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-CAA-ACA--TT-GGC--ATTA-TC-AAGATAT-G-GAGA-AATT-TG-A-AAA-AAAG---T--T-A--AAAGT-C-TGGAAG-CTT--A--TGTG----AG-G--TAGTTTATAA---TTCAA--TAGT-GACCCCGT-C-TGCT--C-AGTATC--G-T---C--A---ACTTT
gi|10 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GG-AA--CCA-TTT-------------G-A-TCTCTTCTTTTTT-CA-GACGT---TTTA-T-GTAATG--------------------TACATCCTT-GAAT-A-TCGGTACTTTTCATAAT-T-A------G-TT-TCAAATTTTGT-GGA-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-CTAAGAAA-CGAATTC-AA--CA--------T-CTAA-CA--------------T--ATA-----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAA-AACTGGTTTT---A-CACCTCATGGAGCCAC-AA-TCTTCATCTTCTCT-A-A-CT-TTCCACAATG--GAA-CTA------CATATGC-AT-GT-AT-GTTATGTTCTAAAA--TAT-T-GGAATATAG---GT----GA----GTAG-C--AAGTTTT-AA--GATAA-CCA-GGAAAG---AC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TTGCGGCA-GGGATAACCATAATT--GG-----AACTC-TTCA----GT-TA-TA-TTTG--A-TATATGCTCAGTCAGTCCA-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TT-AA-TAC-TA-GTAT-AATTCCA-AC-AAGTGGGA-GT--TC-------------------TTGGCCCTTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTG
gi|11 : gTATAG-CT-GTTTTT--A-CA---GAAG-GCT-GG-AA--CCA-TTTCTGAGCACACAACG-AA-ATCTTCTTTT---CA-GACGT---TTTAATTGTAA-GC----CTATAG-GA-GAAGTTACATCCTTAGA-T-AGTCGGTACTTT-CAAATT-TCAC-----A-TC-TCAAATTTTGG-G-A-T-AA-T-TT-ATTTTTA-C-TCATT--CCAAATAT----ATC---GAAA-CGA-TTC-AA--CA--------T-CTAAACAC-------------T--ATACT---T-GAT---------CTCTTTG----AATCTGTTTT---AA--CTCAA--TAA-ACTGTGGTTTCTAA-CCACTCATG-AGCCGCCAA-TCT-CATC-TCTCT-AGA-CT-GTCAGCAATG--GAA-CTA------CATATGC-ATTGT-AT-GT-ATGTTCTAAAA--TAT-T-GGC-TATAG---AT----GA--A-GTAGGC--A-GGT---AATGAACAA-CCA-GGA--G---TC-CAGCAATTT-TGAA-CCACCTA--ATAAACTAG-T-TCGC---A-AGGTTAAA-ATAATT---G-----AACTC-TTCA---AG--TA-TA-TTTGACA-TATAT-CTCAGTCACTC-A-GACGTATGGGAAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-
gi|12 : aC---A-AGGTTAAA-ATAATT--GG-----AACTC-TTCA---AGT------------------AT-CTCAGCCACTC-A-GAAGTATGGGGAAGAAGAGGC-CTATACTA-ATT-A--T-AC-TA-TA-TA---A---AT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCCTCA------TC-CC---TC-GC--T-TATAGGGAAGGGAAAT-C-AT-TT--GAATTGG-CTA---TT--A----C-AC---AT----A--TAAG-C-CG-AAGAGC-TAGA-----------------------AT--ACT-G-CAGGGG-CTTCAAA--TG--CTGC-A--GGGAAT---CAATGA--A-G---C-C--ATT--GTTCTTTCAT-AATATGAACCATTT--T----ATGTCTG-ATGAAA--ATCAG-A-GGTCG----TTT-GTT-TCGGACAA-TT-TT--A-GTCCTATCT-----------------AAACCTCTTGGAAAA--------GA-A-TTGCA-A-TAAACAT-AACACCTA-TAGC--AT-A-----T-AATTTTTCG-CG-TAC-TAG-A-TTA-C-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GA-A-TTCGA-A-TGTA-CACT-GTAG-ATCAT-T-C--AAC
gi|13 : GAAC---CAATTA--A-G---C-C--ATT--GTTCTTTCAT-AATATGAACCATTA---C---AAGGCTG-ATG-AA--TTCGG-A-GG------------CT-AAGGACAA-TT-CT--A-G-----TCTTATTCAAACCTCCTGGAAA---A-----------------GA-A-TTGCA-A-TAAACAT-AACTCCTA-GAGC--AT-A-----T-G
gi|13 : AAATAA-AGG-GGT-CT-GTTTG-AA-A-CACAT-TTCTAGAACTAGTA-C--------A----------ATGTATTAAA---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGGC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CG-T-TG-A-AAATA------TG-T-A--AAAGT-C-TG--AA-CT---------------------------------TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaataaaggggtctgtttgaaacacatttctagaactagtacaatgtattaaacataattcttcatatcacttagacatatggcacaacatttggcatatcaaatattgtaacgttgaaaatatgtaaaagtctgaacttttaattgaccccgtctctcagtactctcagtactttgat
gi|14 : gaaccaattaagccattgttctttcataatatgaaccattacaaggctgatgaattcggaggctaaggacaattctagtcttattcaaacctcctggaaaagaattgcaataaacataactcctagagcatatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttt-TTGTAATGC----CTTTCGCAA-G----TACATCCTT-GT-T-A-ACGGTACTTT-CAAATT-T-ACCGACAG-TC-ACAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGCCATT--CCAAATAT----A-C---GAAA-CGA-TTT-CA--CACTATACAGT-TTGA-TACGTTAATACTCATTT--ATA-----T-GAT---------CTC-TTT----GGTCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCCCATG-AGCCGC-AA-TAT-CATCATCTAT-G-A-CT-GTCAGCAATG--GAA-CTA------CATA--------T-AT-GT-GTGTTCTAAAA--TGT-T-GGA-TATAGCAAATATAAGA--T-GTAG-C--A-GTTTT-AA--GATAA-CCAGGGAA-G---TC-CAGCCATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-A
gi|15 : gATGAACCATTT--CTTGAAAGGCTG-ATG-AA--TT-----------------T-GCC-AAGGACAA-TTATTCAA-A-----CCTCCTGGA-----------AA---A-----------------GA-A-TTGCA-A-TAAACAT-AGCACCTA-GAGC--AT-A-----T-GGTTTTTTG-TG-TAC-TAG-A-TTA-TAG--TT-TTTCACT--------AGACAATT-CCTATTTCC-C--AATTTGAGGT-GG-A-TTCGA-A-TGTA-CACT-GTTG-ATCAT-TCA--AAC-T-TCT-AAAATAA-AGA-GGT-CT-GTTTG-AA-A-CATAT-TTCTAG------TA-CAGTGTATTA----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-------GAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT---------------------------------------------TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-TACCCCGT-C-T-CT--C-AGTACT--A-----C--A-GTACTTTGATT
gi|16 : TTTTTAA-CA---GAAA-GAT-GG-GA--CCA-TGT-------------G-AATCTCTTCTTTTTT-CA-GAAGT---TTTA-TTGTTTTAT----TTTTCGTAA-G----TACATCCTT-GA-T-A-TCGGTACTTT-TAAATT-T-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATATTATAA-C---GAAA-CGA-TTC-AT--CA--------T-CTAA-CAC-------------T--ATACTGTTT-GGTACGTTAATACTCCTTTATATGATATCTTT----AA--CTCAA--TAA------GTTTT---A-CACCTCATG-At
gi|17 : tgAT-AACACCTA-GAGG--AT-A-----T-GATTTTTTT-TG-TAC-TA--A-TTA-T-ATAAT-TTTCGCT--------A-ACAATTCTCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-AGTGTAACAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA--GA-GAT-CTTGTTCG-AA-AACATAT-TTCTAG------TAAC--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGCGGA-TA-TC-AA-ATAT-T--TAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-TT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnngaggggaagtaatttattttactgcattggcgctttttttgtcctatgaat
gi|18 : TT--CATATCAAC-TTA--G-ACCAT--G-GAC----AAC-ATACAT-TT-GAC--A-TA-TT-CA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TGTT-ATTAAAGT-C-TG--AC-ATT--C-TTTTGCATTAA-AATT------TAA------AA--T--G-GAACCCGT-C-T-TC--C-GGCGGT--C-TTTCC--G-GTACTTTG
gi|19 : ccggaaaaataaggtttacatgcacgtgcctacatCTAT-G-A-CT-GTCAGCAATG--GAAACTA-----------------------GT----TTCTAAAA--TGTCT-GAA-T---G---AT----GA--A-GTAG-C--A-GTTTTTAA--GATAC-ACA-TAAA-G---TCTCAGCAAGTT-T-AAACCAC-TA--GTAA--TAG-T-TCGC---A-AGGGTAAA--TAAT---GG-----AACTCCTTTA---AGT-TAATA-TTTG--A-TATATTCTCTGCC-CTC-A-GAGGTATGGGGAA-AGCAGGC-CTATGCTA-ATT-A--T-ACTTA-TA-TAC-TAGGTAT-A-TTCCAGAC-AAGTGGGA-GT--Tgaatttgtagttgaaccaagctcaacgtaatccatataatccattggagacgcaagcacctcaat
gi|2 : TT-GTTTTTAAA-AA---GGAA---T-AG-AAAACCA-TT--------------G-AATCTCTT-TTTTT--CA-GACGT---TTTA-TTGTAATGC-----TATCG-AAAG----TACATC-TT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TTAATTTTTGTTG-A-T-AAAT-TT-ATTTTTA-TGTC------CAAATTT----A-C---GAA--CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--GTAA----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TCA---CTTGTTTT---A-CACC--ATG-AGCCGC-AA-TC--CATCATCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TG--T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-------TAA-TC---GA-----------------T-T-AA-CGAC-GA--ACTAA-TAGAT-TCGC-----AGGTTAAA-ATAATTTCGAAATCTAACTA-TTCAGCCAGTGTA-TA-TTCG--ATTATAT-CT-AACC-CTC-a
gi|2 : --TC-------------------ATGGCCCCTCA------TC-CC---TT-GT--G-TAT-----TGGGAAAA-C-GTGCT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCA--G-AA-AGC-TAGA---TTCGA---A-T-GCT-TTTTAT--ACTG--CAGGGGTTT-CAAA--TG--CTGC-A--AGGAAT---CA-TTA--A-G---C-C--ATC--GTTCTTTCAT-A-TATGAACAATTT---C---ATGTCTG-ATG-AA--TTCAG-AGGGGCT----TTT-GTT-TCGGAAAA-GT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCACA-T-AAGAT----ACCTA-GAGCATAT-A-----T-GA-CTTTTG-TGTTAC-TAGAA-TTA-T-A--A--TTTCGCT--------AGAC-ATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCG--A-TGTA-CA-T-GTAATATCAT-T-A--AACATACCT-AAAATAA-AGA-AGA-CT-GTTCG-AA-A-CATTA-TTCTAG------TA-C--------A----------A--------A---C----AA-TTATCTT--CATATCA-CTTTA--G-AC-A---ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATATAT-GTAA-CA-A-TG---AAA-A------TG-T----AAAGT-C-TG---A-CTT--A-TTTTG----AA-A--T------TAA---TTC-A--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggatatcatggcccctcatcccttgtgtattgggaaaacgtgctgaattggctattacacgtataagcagaaagctagattcgaatgctttttatactgcaggggtttcaaatgctgcaaggaatcattaagccatcgttctttcatatatgaacaatttcatgtctgatgaattcagaggggcttttgtttcggaaaagtttagtctaatgaattgcacataagatacctagagcatatatgacttttgtgttactagaattataatttcgctagacatttctatttaataatttgaggtgggattcgatgtacatgtaatatcattaaacatacctaaaataaagaagactgttcgaaacattattctagtacaaacaattatcttcatatcactttagacaatgacacaacatttggcatatcaaatatatgtaacaatgaaaatgtaaagtctgacttattttgaaattaattcattgaccccgtctctcagtactctcagtactttgatttc
gi|20 : ttgtttttaaaaaggaatagaaaaccattgaatctctttttttcagacgttttattgtaatgctatcgaaagtacatcttgatatcggtactttcaaatttagttttaatttttgttgataaatttatttttatgtccaaatttacgaacgattcaacatctaacactgtaatgatctctttgatctgtttaactcaatcacttgttttacaccatgagccgcaatccatcatctctaactgtcagcaatggaactacatatacatgtatgtatgtcctaaaatgtggatatagatgaagtagcagtttttaatcgattaacgacgaactaatagattcgcaggttaaaataatttcgaaatctaactattcagccagtgtatattcgattatatctaaccctcttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggata-TCTATTTAA-T--AATTTGTGGT-GG-A-TTCGA-A-TCTA-CACA-GTAG-ATCAT-T-A--AA-----------------GA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATAACA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-AGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTtc
gi|21 : TT--GTTCTTTCAT-AATATGAACCATCT---C---ATGTCTG-ATG-AA--TTCAG-A-GGGCG----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------TA---TTTAAACCTCTTGGAAAAGA-A-TTGCA-A-TAAACAT-AACATCTA-GAGC--AT-A-----T-AATTTTGTG-TG-TAC-TAT-A-TTA-C-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GG-A-TTCGA-A-TATA-CACT-GTAG-ATCAT-T-C--AAC
gi|22 : G-AA-A-CATAT-TTCTAG------TA-C--------AGTGTATTAAAA--------A---A-A-TAA-T--TCTT--CATATCA-C-TTA--G-AT-TC--ATGAC----A-C-A-AAAT-TT-GGC--A-TA-TT-AA-ATAT-T-GCAA-CA-T-TG-T-AAA-A------TA-T-A--AAAGT-C-TG--AA-CTT--A-TTTTA----AA-A--T------TAA---TTTAA--T--T-GACCTCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGAT
gi|23 : atgtcattgttataccaaaagaaggaagggaagaagatAT-CT-GTTCG-AA-A-CAT-T-TTCTAT------TA-C--------A----------A--------A---C-AATAA-T--TC-----ATATCAGC-TTGAGG-AC-AA--ATGAC----A-C-AGACAT-TTTGGC--A-TAATC-AA-ATAT-C-GTA--CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CCTTAA-TTTTG----AA-AT-T------TAA---TTCAACTT--T-GACCCCGT-C-T-CT--CAAGTACT----T---C--ATGTACT
gi|24 : aagcaatA-G---TC-CAGCAATTT-T-AA-CCAC-TA--GTAAA-TAG-T-TCGC---A-AGGTTAAA-ATAACT--GG-----AACTC-TTTA---AGT-TA-TA-TTTG--A-TATAT-CTCTGCCCCTC-A-GAGGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------gat
gi|25 : AATGC----CTATCGCAA-G----TACATCCTT-GA-T-A-TCAGTACTTT-CAAATT-C-A------G-TC-TCAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-Ca
gi|26 : tatctactcttttttgcagaagtttttatgtnnnnnnnnnnnnnnnnnnnnnnnnn----TACATCGCT-GA-CGA-TCGG-ACTTT-CAAATT-T-A------GTTT-TCACA-TTTGT-G------A-T-TA-ATATT-A-TGTCATT--CCAAATAT----AGC---GAAA-CGA--TC-AA--CAC-------T-CTAA-CAC-------------TTCATA-----T-GAT---------CTC-TTT----GATCTGTT
gi|27 : gaatga---GT----A--TAAGCC--G-AAGAGC-TAGA---TTCGA---A-T-GCT-TTTTAT--ACT-G-TAGGGG-TTTCAAA--TG--CTGC-A--
gi|28 : tacttgcgagacactgacatacatatcctctctccctnnnnnnnnnnnnnnnnnnnnnnnnnctAT-TTTTAAATT---TA-T--------G----------G--------G---C-A-TAA-T--TCTTTTCATA-CA-C-GTA--G-A--ATTCATGAC----A-C-A-CCAG-TT-TGC--A-TA-TC-AA-ATATAT-GTAA-CA-T-TG-GTAAA-A------TG-TAA--AAAGT-C-TG--AACCTT--A-TTTTG----AACA--T------T
gi|29 : TAA-AGA-GGT-AT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------ACTGTTTTA--A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-GTAT-TT-GGC--A-TA-TC-
gi|3 : ctacccagtttgcatTATAGATTTGTTTTGTAA-CA---GAAG-GGT-GG-AAA-CCAATTT-------------GGAATCTCTTCTTTTT--CA-GACGTA--TTTA-TTGTAATG--------------------TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-TTA------G-TT-TCAAATTTT-T-G-A-T-AA-T-TTTATTTT-AATGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-A---CA--------TTCTAA-CAC-------------T--ATAATTA-T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAA-ACTGTGTTTT---A-CACCTCATG-AGC-AC-AA-TCT-CATCTTCTCT-A-A-CT-GTCAGCAATGCGAAA-CTA------CATATGCCAT-GTTAT-GT-ATGTTCTAAAA--TAT-T-GGA-TATAG---GT----GA--AGGTAG-C--A-G-TTT-AA--GTAAA-CCG-GGAA-G---AC-CAGCAA-TT-T-AA--CAC-TAATATAAA-TAG-TGTCGC---A-AGGG-ATA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TATTTTG--A-TATAT-CTCAGTCACTC-AGGAAGTATGAG--AGAGCAGGC-CTATGC-A-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTTCC-AC-AAG-GGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--TCCAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TTA-A----CAAC---GT----A--TAAGCC-CG-AAGAGCTTAGA---TTCGA---A-T-GCA-TTTTA---ACTAGCCAGGGGTTT--AAA--TG--CTGC-A--AGGGCT---CA-------------------------CTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAGAA-GGGCT----TTT-GTT-TCGGACAA-TT-TT--ATG-----T-T-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAAC--AT-A-----TAGATTTTTTGTTGCTAC-TAG-C-ATATT-G--ATATTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-TCC-TAAATAATAGA--AT-CT-GTTCGAAA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-C-TAA-T--TCTT--CATATCA-C-TTA--G--C-AT--ATGAC----A-C-A-ACAT-TT-GGCA-A-TA-TC-AA-ATAT-T-GTAA-CA-T-TGAA-AAA-A------TG-T-A--AAAG--C-TG--AA-CTT--A-TTTTG----AA-A---------TAA---ATCAA--C--T-GACCCCGT-C-T-CTTCC-AGTACT--C-T---C--A-GTACTTTGATT
gi|30 : -AA--GATAA-CCA-GGAAAG---TT-CGGTAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGT---A-AGGTTAAA-ATAATT--GG-----AACTA-TTCA---AGT-TA-TA-TTTG--A-TATAT-TTCAATCA
gi|31 : C---TT-GC--T-CAT-----AGGGAAAT-C-AT-CT--GAATTGG-CAA---TT--A----C-AC---GTATACA--TAAG-C-CG-AAGAGC-TAGA---TTCAA---A-T-GCA-TTTTAT--ACT-G-CAGGAG-CTTCAAA--TG--
gi|33 : TA--G-AC-CC--ATGAC----A---A-ACAT-TT-G-C--A-TA-TC-AA-ATAT-TTATAAACA-T-GC-G-AAA-A------TG-T-A--AAAGT-C-TG--TA-ATC--A-TTTTT----AA-A--T------TAA---GTTAA--T--T-GACCC
gi|35 : -ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--ATAGT-C-TT--AA--TT--A-CTTT---------------------------AA--T--T-GACCATGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTG
gi|36 : CTAT-G-A-CT-GTCAGCAATG--GAA-TTA---------------------------TGTTCTTAAA--TGT-T-GGA-TATAG---AT----GA--A-GGAG-C--A-GTTTT-AA--AAT
gi|37 : cgT--CATATCA-C-TTA--G-AC-AC--ATGAC----A-CAA-ACAT-TT-GAC--A-TA-TC-AC-ATA----GTAATCG-TATG-G-AAG-G------TG-
gi|38 : TT--A-TTGTG----AA----T------TAA---TTCAA--T--TAGACCCCGT-C-T--T--C-AGTACT--CTT---C--A-GTACTTTG
gi|4 : TATAGATT-GTTTTTTAA-CA---GAA----T-GA-AA--CCA-TTT-------------G-AATCTCTTCTTTTTTCCA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-AATTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-A---CA--------T-CTCA-CAC-------------T--GTA-----T-GAT---------CTCTTTT----GATCTGTTT----A---CTCAA--TAC-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AAATCT-CATCATCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTA-AA--GAATA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TT-G--A-TATAT--TCAGCCACTC-A-AAAGTATGGGGAAGAACAGGC-CTATGCTT-ATT-A--C-AC-TA-TA--AC-TA-GTAT-A-TTCCA-AC-AAGTGGAA-GT--TC-------------------ATGGCCCAT-A------TC-C----TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--AAAT-GG-CTA---TT--A----C-A----GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---C-ATTA--A-G---C-A--ATC--GTTCTTTCAT--ATATAAACAATTT--TC---ATGTCTG-ATA-AAATTCCAG-A-GGGTT----TTT-GTT-TCGGAAAC-TT-TT--T-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GATC--AT-A-----T-GATTTTTTG-TG-TAC-TAC-A-TTA-T-A--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GA-A-TTTGA-A-TGTT-CAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-G--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|40 : AT-----AGCGAAAT-C-AT-TT--GAATTGG-CTA---TT--A----A-AC---GT----A--TAAG-C-CG-AA
gi|41 : --T--T-GAACCCGTTC-T-CT--C-AGTACTT-C-T---C--A-GTACTTTGATT
gi|42 : --T-GACCCCGT-C-T-CT--C-AGCACT--C-T---C--A-GTACTTAGA
gi|5 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GGGAA--CCA-TTT-------------G-AATCTCTTCTTT----CA-GACGT---TTTA-TTGTAATG--------------------TACATC-TT-GA-T-A-TCGTTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGTTG-A-A-AT-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTGTT----GATCTGTTT----AA--CTCAA--TAA-AC--TGTTTT---A-CA-TTCATG-AGCCAC-AACTCT-CATCTTCTCT-A-A-CTGGTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--ATT-T-GGA-TATAG---GT----GA--A-GTAG-C--A-G-TTT-AA--GAAAA-ACA-GGAA-G---AC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC-----AGGAT-AA-ATAATT--GG-----AACTC-TTCAGT-AGT-TATTA-TTTG--A-TA-AT-CTCAGTCACTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTATCTT-A--T-AC-TA-TA-TACTTA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGG-AAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAG-C-CG-AAG-GC-TAGA---TTCGA---ATT-GCA-TTTTAT--ACT-G-CAGGGG-TTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--------CAC--ATC--GTTCTTTCAT-AATATGAACAA-TT--TC---GTGTCTGAATG--A--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-GT----TTT-----------------AA---T-----------------GA-A-TTGCA-A-T-AAGAT-AACA-CTA-GAAC--A--A-----T-GA--TTTTG--G-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-ATTTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT--AAATAA-AGA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---CAA-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATA--T-GTGA-CA---TG-A-AAA-A------TG-T----AACGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|6 : TATAGATT-GTTTT--AATCA---GAAG-G-T-G--AA--CCA-TT----------------AATCTCTTCTTTTC--AA-GAAGT---TTTA-TT-TAATG--------------------TACATCCT--GA-T-A-TCGGTACTTT-CAAATTAT-A------G-TT-TCAA-TTTTGT---A-T-AA-T-TTTAATTT-A-T--CATT--CCAAATAT----A-C---GAAA-CG--TTC-AAAACA--------T-CTA--CAC-------------T--ATA-----T-AAT---------CTCTTT-----GATCT--TT----AATACTCAAAATAA-AC---GTTTT---AACACCTCATG-AGCCAC-AA-TCT-CATCTTCTCT-A-AACT--TCAGCAATG---AA-CTA------CATATGC-ATAGT--T-GT-ATGTTCTTAAA--TAT-T-GGAATATAG---GT-----A--A-GTAG-C--A-GTTTT-AA--GAAAA-CCA-GGAA-A------CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T--CGC---C-AGGATAAATATA-TT--G------AACTC-T-CA---AGT--A--A-TTT---A-TAAATTCTCA-TCGCTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-AATT-AC-TA-TA-TAC-TA-GTATTA-TTCCA-AC-AAGTGG-A-GT--TC-------------------GTGGCCCCTCA------TC-CC---TTCGC--T-CAT-----AGG-AAAT-C-GT-CT--GAAT-GG-CTA---TT--A----C-AC---GT----A--TAAGCC--G-AAGAGC-TAGA---TTCGA---A-T-GCATTTTTAT--ACT-G-CAGGGG-TTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--AGG---C-C--ATC--TTTCTTTCAT-AATATGAACCAATT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACCA-AT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGC----CAAAGAT-AACACCTA-AAAC--ATAA-----T-GATTTTTTG-T--TAC-TAG-ATTTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAATT--AATTTGAGG--GG-A-TTCGA-A-TTTA-C-CT-GTA--ATCAT-T-A--AACATGCCTAAAAATAA-A-A-TAT-CT-GTTCG-AAGA-C-TATATTCTAG------TA-C--------A----------A--------A---C-A-TAATT--TCTT--CATATCA-C-TTA--GAAC-AT--ATGAC----A-C-A-ACAT-TC--GC--A-TA-TCAAA-ATAT-T--TAA-CA-T-TG-A-AAA-AG-----TG-T-A--AAATT-CATG--AA-C-T--A-TTTTG-----A-A--T------TAAT--TTCAA--T--G-AACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|7 : TAGATT--TGTTTTAA-CA---GAAG-G-TTGA-AA--CCA-TTTTT-----------G-AATTTCTTCTTTT---CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TA-ATCCTT--A-T-A-TCGGTACTTT----------------------TCAAATTTTGT-G-AAT-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-AA--CA--------T-TCTA-CAC-------------T--GTAA----T-GAT---------CTCTTG-----GATCTGTTT----AA--CTCAA--TAACACTTTGTTTT---A-CACCTCATG-AGCCGT-AA-TCT-CATCATCTCT-T-A-AT-GTCAGCAATG--GAA-CTA------CATATAC-A--GT-AT-TC-ATG-TCCAAAATTTGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GA-AA-CCA-GGAA-G---T--CAGCAATTT-T-AA-CCAC-TA--ACTAA-TAGTT-TCGC---A-AGGGTTAA-ATAATT--GG-----AACTC-TTCA---A-T-TATTC-TTTG--ATTATAT-CTCAGCCACTC-A-GAAGTAT-GGGAAGAG-AGGC-CTATGCTA-TTT-A--CAAC-TA-TA-TAC-TA-GTAT-A-TTCCA-A--AAGTGGAA-GTTGTC-------------------ATGGCCCCTCA------TC-TC---TT-GC--T-CAT-----AGGG-AAT-C-GT-CTCGGAATTGGTTTA---TT--A----C-AC---GT----A--TAAG-C-CG-AAGAGC-TAGA---TTCGA---A-TGGCA-TTGTAT--ACTTG-CAGGGGTGTTCAAA--TG--CTGCAA--AGGAAT---CAATTATCA-G-----C--ATC--CTCTTTTCATAAATATGAA-AA-TT--TC---A-GTCTG-ATG-AA--TTCAG-A-GGG-T----TTT-GTT-TCGGAAAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-ATTTGCA-A-TAAAGAT-AACACCTA-G
gi|8 : cTATAGATT-TGTTTTTAA-CA---GAAG-GAT-GT-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATC-T-A------G-TT-TCAAATTTTGG-G-A-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-AGA-TTC-AA--CA--------T-CTGA-CAC-------------T--GTG-----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAC-ACTTTGTTTT---A-CACCTCATA-AGTCGC-AA-TTT-CATCATCTCT-T-A-CT-GTCAGCAATG--GAA-CTA------CATATAC-AT-GT-AT-GT-ATGTCCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAT-GCA-GGAA-G---TC-CAGCAATTC-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGG-TAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGTCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATC-A--C-AC-TC-TA-TGC-TA-GTAT-A-TTCCA-AC-AAGTGGAA-GT--TCATGTAGGGGAGGGTGCTGAGTGGCCCCGAACGATGTTG-CCAGTTT-GC--TCCAT-----TGGGAAATGC-GT-CT--GAATGGC-CTAAATTC--AGCTCC-CT---GT----A--TAAGCCACGAAAGAG
gi|9 : a-TA-GTAT-A-TTCCA-ACCAAGTGGGA-GT--TC-------------------GTGGCCC-TCA------TCGCC---TT-GCATT-CAC-----AGGGAAAT-G-CT-CT--GAATTG--CTA---TT--A----C-AT---GT----AAACAAGCC----AAGAGC-TAGA---TTCGACGCA-T-GCA-TT--AT--ACTG--CAGGGGTTT-CAAAAATGGCCTGC-A--AGGAA----CAATTA--A-G---C-CCCATC--GTTCTTC--T-AAT-CGAA-AATT----C---ATGTCTGGATG-A---TTCAG-A-GGGCTCTTTTTT-GTTGTCGGACAAATT-TT--AAG-----TCT-----------------AA---T-----------------GA-A-TTGCA-AATAAAG-T-AACACCTA-GAACC-AT-A-----T-GATTCTTTG-TG-TAT-AAG-A-T-A-T-G--AT-TT-CGCT--------AGACAATT-TCTATT-AA-T--AATTTGAGGT--G-A-TTCGAGA-TTTA-CACT-GTAG-A-CAC-T-T--AACATCCCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A--ATAT-TTCTAG------TA-C--------A----------A--------A---C---TAATT--TCTT--AATATCA-CGTGA--G-AC--T--ATGACCACTA-C-A-ACATCTT-GGC--A-TA-TC-AA-A-ATAT-GTAA-CA-T-TG-G-AAA-AAGATTTTA-A-A--AAAGTCC-TG--AA-CTA--A-TATTG-----A-A--T------TAATATTTC-A--T--T-GACCCCGTACGT-CT--C-AGTACTTAC-T---CCGG-GTACTTTG
blockSeqs : TG T . GG T G AA A CTGAGCACACAACG TTC . A A CCTATAGGAGAAGT A A G G T A C CCGACA T . T G A . A G T T A . TATA T TAA A A . AAA CTATACAG T A GTTAATACTCATT TC CTGTT . ACGTTAATA TATAT T TA AA C CT CTA A G C A T T AG A G CG A . C TT T . T TT C . A CAA ATAA . G G . A T TG T . G A TCT . G A C AT C A G GGCA A C TC AATCT C GCC G A T AC T G C G . T . AT A T . . T G T A G C . TG ATGTAGGGGAGGGTGCTGA CGATGT G AGT C ATT AGGGA G . G CG T AAT A GCTC A . ATAC AA CCAC A T . CGC T G T . AGC T T AA GC A . . AGCCCC . A C T CTTGA A A AT A G CTTT . G A A CA T TCCTA TATTCAAACCTCCTGGAAAA . T C A . . AT A . A T T . AA TATA A . C T . G . T G G G A . T . CA A AA T G . T A G A A AACTAG A AGTGTATTAAAA . AA T TA TT A T AG A ATTC CACT A A T C T GG . A A . A T A . A GT T AGATTT T ATT C A . C TA T CATT C ATT TAT CT . A T G . TC A TA T TTC CG T
blockSeqs : T . . GC . . A . TTG TT . . . CCTTTCGCAAG . . . . . . T C . . T . . . . G T T . . . G . A . . A C . . . . ATTA . . G . . . . TG . . . . C . A A . . . . . . TA . . . . . . A . . . . . . . . . C . . A AC . . . . . . T . A T T . . . GT . T . . T T . . . . . . . . . . . . . . . . . . . . . . . TC . . . . . . . . . . . . . CCC . . . . . . . . GG T T . . . . . AGGCC . . C T TC G . . . . . . . . . . A T TATTTAAACCTCTTGGAAAA . . . . . . C . . . . C . AT TAG . . . . . G . . . . G . . . . C G A . G . . . . . . ATT . AATGTATTAA . AA T . . G G . . CAT . . . G . . A . . . . A . T . . AA . G . AA . . . . . T . . TT T . . . A . . . . T . . . .
blockSeqs : G . . GA . . . . GG TT . . . TTTTTCGTAAG . . . . . . . . . . . . . . . G T . . . . . . . . . A . . . . . CT . . T . . . . TT . . . . . . A G . . . . . . T . . . . . . . . . . . . . . . . T . . . TC . . . . . . . . A T . . . . . . T . . . T . . . . . . . . . . . . . . . . . . . . . . . TC . . . . . . . . . . . . . CCC . . . . . . . . TG T T . . . . . TCAGC . . C T TC . . . . . . . . . . . . . AAACCTCTTGGAAAA . . . . . . . . . . . . . A TTG . . . . . . . . . . G . . . . A C A . G . . . . . . . . AGTGTATTAA . A . . . . . . . AT . . . . . . . . . . . A . . . . A . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : G . . GG . . . . G T . . . CCTATCGCAAG . . . . . . . . . . . . . . . . T . . . . . . . . . A . . . . . A . . T . . . . CT . . . . . . T G . . . . . . T . . . . . . . . . . . . . . . . T . . . TC . . . . . . . . A T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . CC . . . . . . . . G T T . . . . . AGCC . . A T TC . . . . . . . . . . . . . CCTGGAAAA . . . . . . . . . . . . . A CA . . . . . . . . . . G . . . . A . A . A . . . . . . . . ACTGTTTTAA . A . . . . . . . AT . . . . . . . . . . . . . . . . A . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : G . . GG . . . . G T . . . CCTATCGAAAG . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . A . . T . . . . TG . . . . . . A A . . . . . . T . . . . . . . . . . . . . . . . T . . . TC . . . . . . . . A G . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . CA . . . . . . . . G T T . . . . . AGCC . . C T TC . . . . . . . . . . . . . AAT . . . . . . . . . . . . . A TA . . . . . . . . . . C . . . . A . T . T . . . . . . . . AA . A . . . . . . . AT . . . . . . . . . . . . . . . . A . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : T . . GA . . . . G C . . . CCTATCGAAAG . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . T . . . . TT . . . . . . T A . . . . . . T . . . . . . . . . . . . . . . . A . . . AC . . . . . . . . A T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . . . . . . CC . . . . . . . . G . T . . . . . AGCC . . A T TC . . . . . . . . . . . . . AAT . . . . . . . . . . . . . A CA . . . . . . . . . . A . . . . C . A . G . . . . . . . . AA . A . . . . . . . TC . . . . . . . . . . . . . . . . A . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : G . . G . . . . G T . . . CCTATCGAAAG . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . TT . . . . . . T G . . . . . . T . . . . . . . . . . . . . . . . T . . . TT . . . . . . . . A T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . CC . . . . . . . . G . T . . . . . AGCA . . A T T . . . . . . . . . . . . . AAT . . . . . . . . . . . . . C TA . . . . . . . . . . T . . . . A . A . G . . . . . . . . AA . A . . . . . . . AA . . . . . . . . . . . . . . . . T . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : T . . G . . . . G . . . . CTATCGAAAG . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . TT . . . . . . A A . . . . . . T . . . . . . . . . . . . . . . . T . . . TC . . . . . . . . A G . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . CC . . . . . . . . G . . . . . . . CAC . . A A C . . . . . . . . . . . . . AAT . . . . . . . . . . . . . A TG . . . . . . . . . . G . . . . A . . . T . . . . . . . . AA . A . . . . . . . AT . . . . . . . . . . . . . . . . A . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . G . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . A A . . . . . . . . . . . . . . . . . . . . . . . A . . . AC . . . . . . . . A T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . CC . . . . . . . . G . . . . . . . . . . C T C . . . . . . . . . . . . . AAT . . . . . . . . . . . . . A TG . . . . . . . . . . T . . . . A . . . T . . . . . . . . GG . A . . . . . . . AT . . . . . . . . . . . . . . . . G . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . A . . . TC . . . . . . . . C T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . CC . . . . . . . . G . . . . . . A . C . . . . . . . . . . . . . AAT . . . . . . . . . . . . . A TG . . . . . . . . . . T . . . . A . G . . . . . . . . AA . C . . . . . . . CC . . . . . . . . . . . . . . . . A . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . A . . . T . . . . . . . . A A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . CC . A . C . . . . . . . . . . . . . AAT . . . . . . . . . . . . . . . . . . T . . . . T . . . . . . . . . . AA . A . . . . . . . AC . . . . . . . . . . . . . . . . G . . . G . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . A A . . . . . . . . . . . . . . . . . . . . . CC . . . . . . . . . . . AA . A . . . . . . . AT . . . . . . . . . . . . . . . . A . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . . . . . . . . . . AA . . . . . . . . . AT . . . . . . . . . . . . . . . . A . . . A . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . . . AA . . . . . . . . . AT . . . . . . . . . . . . . . . . A . . . . . . . . . . . . T . . . . . . . . . . . . . .
blockSeqs : . . . . . A . . . . . . . . . . . . . . . . G . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . .
blockSeqCons : *** G************** T** *** CCTATCGAAG********** ** ***** **** ** TT A** ****** ** ** ** TC**** A**** T*** ** *** CC** *** *** ** ** *** AGCC********* ** TC***** AAT************************************* ***** A** CG**** ******** ** A*** A* G* *** ****** ** T******** **
originalCons : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTTT----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCT-A-A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAA-CCA-GGAA-G---TC-CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC-CG-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---CAATTA--A-G---C-C--ATC--GTTCTTTCAT-AATATGAACAATTT--TC---ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG-A-TTA-T-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
finalCons : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTTG--------------AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGCCTATCGAAG----------TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------G-TT-TCAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA--------T-CTAA-CAC-------------T--ATA-----T-GAT---------CTCTTT-----GATCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTCTA--A-CT-GTCAGCAATG--GAA-CTA------CATATGC-AT-GT-AT-GT-ATGTTCTAAAA--TGT-T-GGA-TATAG---AT----GA--A-GTAG-C--A-GTTTT-AA--GATAA-CCA-GGAA-GTC----CAGCAATTT-T-AA-CCAC-TA--ATAAA-TAG-T-TCGCA----AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-TA-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-TA-TAC-TA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GCT---CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT--A----C-AC---GT----A--TAAGCC--G-AAGAGC-TAGA---TTCGA---A-T-GCA-TTTTAT--ACTGG-CAGGGGTTTTCAAA--TG--CTGC-A--AGGAAT---CAATTAAGCC---------ATC--GTTCTTTCAT-AATATGAACAATTTTC-----ATGTCTG-ATG-AA--TTCAG-A-GGGCT----TTT-GTT-TCGGACAA-TT-TT--A-G-----TCTAAT-------------------------------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAGA--TTACG----AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-TA---AACAT-CCTA-AAATAA-AGAG-AT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-AT--------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): AATAAATAATCATCTAATCTGTTTTTTTTGGTTTAATGTAAGCTATCGCAAGACGTTATCTCGGCCTACGGTATTCAAATTTACTTTATTCTTGT
Unaligned ( gi|34 ): TGTTAACTTACCATGTATAGTTCTTTCTGGTGCACACACCTCAATTGTTTGATTTCCAGAATCGTTTATCACACAATGATATTTAAT
Unaligned ( gi|39 ): TTTTATCATTGTAAGCGTGCGATGAAATTGACGAATTATTTTGT
Alignments
lowQualScore : 222 222222222222222 111 111 44444444444444444444 111111 1 2222222222222222 11111 22222 111111111 1111 111 2222222222222222222 111111 111 111 222 1111111111111 1111111 6666666666666666666666666666666666666666 111 11111 11111111 1 111111 2222222222222222222222222222 111111
lowQualScore : 66 3 666 222 3 3 88 3 555555555555555 777 3 000 3 88888888888888888888 2 2 2 2 2 2 5 111111 2 2 5 2 2 2 2 8 1 5 2 33 6666 8 555 5 3 3 444 3 3 0000000000000000 3 11111 44444 3 555555555 3 77777 3 3 0000 44 77 3 88 555 3 3 3 7 3 4 3 3 3 3 44 3 888888 0 3 66 444 3 3 44 3 3 6 3 555 6666 3 3 3 6666 2 33 55 3 000 555 2 2 2 2 33 2 5 2 444 2 3 66 33 77777 2 888 2 5 2 2 33 5 8 0 3 3 3 3 3 44 3 3 3 3 3 3 3 3 3 3 3 44 5555555555555555555 000000 3 555 3 8888 77777 3 3 3 44 0 3 000 3 7777 3 555 6666 44 3 3 888 7 666 000 7 3 55 333 8 8 55 55 55 4 777 0 5555555555555 55 3 3 1 6666666 0 3 3 3 44 3 3 999999 3 3 3 44 6 88888 2222222222222222222222222222222222222222 3 3 3 3 3 3 77 3 88888 3 3 7 3 000 3 22222 3 33333333 3 3 44 6 3 3 3 6 1 3 3 3 3 5555 2 88 3 77 3 3 2 2 2 2 222222 2 4444444444444444444444444444 444 444 5 33 33 4 4 33 2 33333 4444 2 4 4 2 2 55 2 2 2 2 6 2 4 2 2 444 2 222222 2 4444 2 2 33 2 33 4 4444 2 888888888 666 33 22 2 4 2 2 33 2 55 2 333 33 2
lowQualScore : .. . ... ... . . .. . ............... ... . ... . .................... . . . . . . . ...... . . . . . . . . . . . .. .... . ... . . . ... . . ................ . ..... ..... . ......... . ..... . . .... .. .. . .. ... . . . . . . . . . . .. . ...... . . .. ... . . .. . . . . ... .... . . . .... . .. .. . ... ... . . . . .. . . . ... . . .. .. ..... . ... . . . . .. . . . . . . . . .. . . . . . . . . . . . .. ................... ...... . ... . .... ..... . . . .. . . ... . .... . ... .... .. . . ... . ... ... . . .. ... . . .. .. .. . ... . ............. .. . . . ....... . . . . .. . . ...... . . . .. . ..... ........................................ . . . . . . .. . ..... . . . . ... . ..... . ........ . . .. . . . . . . . . . . .... . .. . .. . . . . . . ...... . ............................ ... ... . .. .. . . .. . ..... .... . . . . . .. . . . . . . . . . ... . ...... . .... . . .. . .. . .... . ......... ... .. .. . . . . .. . .. . ... .. .
lowQualScore : 55 6 444 333 6 6 66 6 555555555555555 999 6 000 3 44444444444444444444 9 9 9 9 9 9 7 111111 9 9 7 9 9 9 9 6 4 7 9 99 1111 6 000 7 1 1 888 1 1 4444444444444444 1 99999 66666 1 444444444 1 77777 1 1 4444 66 99 3 22 888 3 3 6 3 6 5 1 1 1 1 22 1 888888 7 1 55 666 1 1 22 1 1 2 1 444 5555 1 1 1 5555 9 99 99 1 777 888 9 9 9 9 99 9 7 9 777 7 6 11 99 11111 9 999 9 7 9 9 99 7 6 8 1 3 3 3 3 66 3 3 3 6 3 3 3 3 3 3 3 22 8888888888888888888 555555 6 888 3 3333 77777 1 1 1 22 4 3 444 3 1111 3 888 5555 22 1 1 555 3 444 000 3 6 00 777 8 8 00 00 55 0 000 8 0000000000000 00 6 6 0 5555555 7 3 3 3 66 3 3 444444 3 3 3 66 7 33333 8888888888888888888888888888888888888888 3 3 3 3 1 1 99 3 33333 3 6 3 6 000 6 99999 6 22222222 3 3 66 7 3 3 3 7 0 3 3 3 3 1111 0 99 3 22 1 1 9 9 9 7 333333 7 7777777777777777777777777777 777 555 3 77 22 7 7 11 2 55555 7777 2 4 4 2 2 33 2 2 2 2 7 2 4 2 2 333 2 555555 2 6666 4 4 22 4 11 4 7777 2 111111111 555 11 99 1 4 2 2 11 2 33 2 999 11 2
consensus : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------GTT-T-CAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA-T-C----------------TAA-CACT-----ATA-----T-GAT---------CTCT-T-----T-GA-TCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTC-TA-A-CTG-TCAGCAATG--GAA-CTA------CATATGC-AT-GT-A-TGT-ATGTTCT-AAAA--T-GT-TGGA-TAT-AG---AT----GAA-GTAG-CA-GTT----TT-AA--GAT-AACCA-GGAA---GTC-CAGC-AATTTT-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-T-A-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-T-ATACT-A-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT-A----C-A---CGT----A--TA-AG-CC---GAAGAGC-TAGA---TTCGA---AT-GCA-TTTTA--TACTGG-CAGGGGTTTTCAAA--TG--CTG--C-AAGGAAT---CAATTA--A-G---C-C--AT--CGTTCTTTCA-T-AATATGAACAATTT--TC---ATGTCTG-A-TG-AA--TTCAG-A-GGGC-T----TTTGTT-TCGGACAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG---A-TTAT-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
Reference ( family-2307 ) : TATAGATT-GTTTTTTAA-CA---GAAG-G-T-GG-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AA-G----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------GTT-T-CAAATTTTGT-G-A-T-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA-T-C----------------TAA-CACT-----ATA-----T-GAT---------CTCT-T-----T-GA-TCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AA-TCT-CATCNTCTC-TA-A-CTG-TCAGCAATG--GAA-CTA------CATATGC-AT-GT-A-TGT-ATGTTCT-AAAA--T-GT-TGGA-TAT-AG---AT----GAA-GTAG-CA-GTT----TT-AA--GAT-AACCA-GGAA---GTC-CAGC-AATTTT-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGNTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-T-A-TTTG--A-TATAT-CTCAGCCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-T-ATACT-A-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TT-A----C-A---CGT----A--TA-AG-CC---GAAGAGC-TAGA---TTCGA---AT-GCA-TTTTA--TACTGG-CAGGGGTTTTCAAA--TG--CTG--C-AAGGAAT---CAATTA--A-G---C-C--AT--CGTTCTTTCA-T-AATATGAACAATTT--TC---ATGTCTG-A-TG-AA--TTCAG-A-GGGC-T----TTTGTT-TCGGACAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAGC--AT-A-----T-GATTTTTTG-TG-TAC-TAG---A-TTAC-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-A-TNTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|1 : TATATT-GTATTTTAA-CATTTAAAGAG-T-GG-AA--CCA-TTT---------------AATCTCTTCTTT----CATGACGTGGGTGTG-T-GTGATGGGGGGCTGT---AA-GGT--TACAATCCT-GA-T-A-TCG-TACTTT-CAAATT-T-A------GTTAT-CAAATTTTGT-A-G-TCAA-T-TT-ATTTC-A-TGTCACTATCCAA-TAT----AGC---GAAA-CGA-TTCCAA--CA-T-C----------------TAA-CACT-----ATA-----TTGATT--------CTCT-T-------GA-TC-GCTCCTCCAA--CTCAAC-TAA-ACT--GTTTT---A-CACCTCATG-AGCCAC-AA-TCT-CATCTTCTCTTA-A-CTG-TCAGCAAT---GAA-CTAAGTTATCATATGC-AT-GT-ATTGT-ATGTCCTAAAAA--TAAT-AGGA-TATAAG---A------GA-GCAG-TA-GCCCACGTT-AA--GATAAACCA-GGAAGACGTCGTAGCAAATTAT-AA--CAC-TA--ATAAA--AG-T-TCTC---ACAGGATAAA---AATT---------AACTC--TCA---ATT-TA-T-A-TTGA--A-TATA--CTCAGCTACTC-A-GAA-TAT-AGGAAGACCCAGCACTATGCAA-GTTGA--T-AC-TAGTAATACG-A-GCAT-A-TTCCA-AC-AAGTGGGACGT--TC-------------------GTG--CCCTCA------TC-CC---TT-GC----CAT-----AGGAAAAT-CAGT-CT--GAATTAG-CTATT-TT-A----T-ATTCTGT----A--TATA---C---ATAGAGCATAAAGATTTCGAC--AT-GCA-TTTTATTTACT-G-CAAGGTTTTTC-AA--TG--CTGTAT-AAGGAATTCCCAATTA--A-AGCTC-T--ATTCTGTTCTTTCATT-AATATGAACAATTTCATC---GCGT----A-TG-AA---TCAG-A-GGGCTT----TTTGTT-TCGGACAA-TT-AT--A-G-----TCTAA---------------AA---T-----------------GACA-TTGCA-A-TAAAGATAAACACCTACGAAC--AT-ATTTATT-GGTTATTTC-TT-TATGTAG-----TCA--G--AT-TTCCGCTTACTGCACAGATTATG-CTTATTTAA-TGAAGTTTGAGGT-GGCA-TTCGA-ATTTTA-CACTGGTAG-ATCATAT-ATTTACAT-CCTAAAAATCA-TTATTATCCT-G-TCA-AA-C-CATAT-TTCTAG------TA-C--------A----------A--------AATTC-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-CAA-ACA--TT-GGC--ATTA-TC-AAGATAT-G-GAGA-AATT-TG-A-AAA-AAAG---T--T-A--AAAGT-C-TGGAAG-CTT--A--TGTG----AG-G--TAGTTTATAA---TTCAA--TAGT-GACCCCGT-C-TGCT--C-AGTATC--G-T---C--A---ACTTT
gi|10 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GG-AA--CCA-TTT-------------G-A-TCTCTTCTTTTTT-CA-GACGT---TTTA-T-GTAATG--------------------TACATCCTT-GAAT-A-TCGGTACTTTTCATAAT-T-A------GTT-T-CAAATTTTGT-GGA-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-CTAAGAAA-CGAATTC-AA--CA-T-C----------------TAA-CA-T-----ATA-----T-GAT---------CTCT-T-----T-GA-TCTGTTT----AA--CTCAA--TAA-AACTGGTTTT---A-CACCTCATGGAGCCAC-AA-TCTTCATCTTCTC-TA-A-CTT-TCCACAATG--GAA-CTA------CATATGC-AT-GT-A-TGTTATGTTCT-AAAA--T-AT-TGGAATAT-AG---GT----GA--GTAG-CAAGTT----TT-AA--GAT-AACCA-GGAAA--GAC-CAGC-AATTTT-AA-CCAC-TA--ATAAA-TAG-T-TTGCGGCA-GGGATAACCATAATT--GG-----AACTC-TTCA----GT-TA-T-A-TTTG--A-TATATGCTCAGTCAGTCCA-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TT-A-ATACT-A-GTAT-AATTCCA-AC-AAGTGGGA-GT--TC-------------------TTGGCCCTTCA------TC-CC---TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--GAATTG
gi|11 : gTATAG-CT-GTTTTT--A-CA---GAAG-GCT-GG-AA--CCA-TTTCTGAGCACACAACG-AA-ATCTTCTTTT---CA-GACGT---TTTAATTGTAA-GC----CTATAG-GA-GAAGTTACATCCTTAGA-T-AGTCGGTACTTT-CAAATT-TCAC-----ATC-T-CAAATTTTGG-G-A-T-AA-T-TT-ATTTTTA-C-TCATT--CCAAATAT----ATC---GAAA-CGA-TTC-AA--CA-T-C----------------TAAACACT-----ATACT---T-GAT---------CTCT-T-----T-GAATCTGTTTT---AA--CTCAA--TAA-ACTGTGGTTTCTAA-CCACTCATG-AGCCGCCAA-TCT-CATC-TCTC-TAGA-CTG-TCAGCAATG--GAA-CTA------CATATGC-ATTGT-A-TGT-ATGTTCT-AAAA--T-AT-TGGC-TAT-AG---AT----GAA-GTAGGCA-GGT-------AATGAAC-AACCA-GGA----GTC-CAGC-AATTTTGAA-CCACCTA--ATAAACTAG-T-TCGC---A-AGGTTAAA-ATAATT---G-----AACTC-TTCA---AG--TA-T-A-TTTGACA-TATAT-CTCAGTCACTC-A-GACGTATGGGAAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-
gi|12 : aC---A-AGGTTAAA-ATAATT--GG-----AACTC-TTCA---AGT-------------------AT-CTCAGCCACTC-A-GAAGTATGGGGAAGAAGAGGC-CTATACTA-ATT-A--T-AC-TA-T-ATA---A---AT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCCTCA------TC-CC---TC-GC--T-TATAGGGAAGGGAAAT-C-AT-TT--GAATTGG-CTA---TT-A----C-A---CAT----A--TA-AG-CC---GAAGAGC-TAGA----------------------A--TACT-G-CAGGGG-CTTCAAA--TG--CTG--C-AGGGAAT---CAATGA--A-G---C-C--AT--TGTTCTTTCA-T-AATATGAACCATTT--T----ATGTCTG-A-TGAAA--ATCAG-A-GGTC-G----TTTGTT-TCGGACAA-TT-TT--A-GTCCTATCT-----------------AAACCTCTTGGAAAA--------GA-A-TTGCA-A-TAAACAT-AACACCTA-TAGC--AT-A-----T-AATTTTTCG-CG-TAC-TAG---A-TTAC-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GA-A-TTCGA-A-TGTA-CACT-GTAG-ATCAT-T-C--AAC
gi|13 : GAAC---CAATTA--A-G---C-C--AT--TGTTCTTTCA-T-AATATGAACCATTA---C---AAGGCTG-A-TG-AA--TTCGG-A-GG------------CT-AAGGACAA-TT-CT--A-G-----TCTTATTCAAACCTCCTGGAAA---A-----------------GA-A-TTGCA-A-TAAACAT-AACTCCTA-GAGC--AT-A-----T-G
gi|13 : AAATAA-AGG-GGT-CT-GTTTG-AA-A-CACAT-TTCTAGAACTAGTA-C--------A----------ATGTATTAAA---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGGC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CG-T-TG-A-AAATA------TG-T-A--AAAGT-C-TG--AA-CT---------------------------------TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaataaaggggtctgtttgaaacacatttctagaactagtacaatgtattaaacataattcttcatatcacttagacatatggcacaacatttggcatatcaaatattgtaacgttgaaaatatgtaaaagtctgaacttttaattgaccccgtctctcagtactctcagtactttgat
gi|14 : gaaccaattaagccattgttctttcataatatgaaccattacaaggctgatgaattcggaggctaaggacaattctagtcttattcaaacctcctggaaaagaattgcaataaacataactcctagagcatatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttt-TTGTAATGC----CTTTCGCAA-G----TACATCCTT-GT-T-A-ACGGTACTTT-CAAATT-T-ACCGACAGTC-A-CAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGCCATT--CCAAATAT----A-C---GAAA-CGA-TTT-CA--CA-C-TATACAGTTTGATACGTTAA-TACTCATTTATA-----T-GAT---------CTCT-T-----T-GG-TCTGTTT----AA--CTCAA--TAA-ACTTTGTTTT---A-CACCCCATG-AGCCGC-AA-TAT-CATCATCTA-TG-A-CTG-TCAGCAATG--GAA-CTA------CATA--------T-A-TGT-GTGTTCT-AAAA--T-GT-TGGA-TAT-AGCAAATATAAGAT-GTAG-CA-GTT----TT-AA--GAT-AACCAGGGAA---GTC-CAGC-CATTTT-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-A
gi|15 : gATGAACCATTT--CTTGAAAGGCTG-A-TG-AA--TT------------------TGCC-AAGGACAA-TTATTCAA-A-----CCTCCTGGA-----------AA---A-----------------GA-A-TTGCA-A-TAAACAT-AGCACCTA-GAGC--AT-A-----T-GGTTTTTTG-TG-TAC-TAG---A-TTATAG--TT-TTTCACT--------AGACAATT-CCTATTTCC-C--AATTTGAGGT-GG-A-TTCGA-A-TGTA-CACT-GTTG-ATCAT-TCA--AAC-T-TCT-AAAATAA-AGA-GGT-CT-GTTTG-AA-A-CATAT-TTCTAG------TA-CAGTGTATTA----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-------GAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT---------------------------------------------TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-TACCCCGT-C-T-CT--C-AGTACT--A-----C--A-GTACTTTGATT
gi|16 : TTTTTAA-CA---GAAA-GAT-GG-GA--CCA-TGT-------------G-AATCTCTTCTTTTTT-CA-GAAGT---TTTA-TTGTTTTAT----TTTTCGTAA-G----TACATCCTT-GA-T-A-TCGGTACTTT-TAAATT-T-A------GTC-T-CAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATATTATAA-C---GAAA-CGA-TTC-AT--CA-T-C----------------TAA-CACT-----ATACTGTTT-GGTACGTTAATACTCC-TTTATAT-GA-TATCTTT----AA--CTCAA--TAA------GTTTT---A-CACCTCATG-At
gi|17 : tgAT-AACACCTA-GAGG--AT-A-----T-GATTTTTTT-TG-TAC-TA----A-TTAT-ATAAT-TTTCGCT--------A-ACAATTCTCTATTTAA-T--AATTTGAGGT-GG-A-TTCGA-AGTGTAACAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA--GA-GAT-CTTGTTCG-AA-AACATAT-TTCTAG------TAAC--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGCGGA-TA-TC-AA-ATAT-T--TAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-TT--C-AGTACT--C-T---C--A-GTACTTTGATnnnnnnnnnnnnnnnnnnnnnnnnngaggggaagtaatttattttactgcattggcgctttttttgtcctatgaat
gi|18 : TT--CATATCAAC-TTA--G-ACCAT--G-GAC----AAC-ATACAT-TT-GAC--A-TA-TT-CA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TGTT-ATTAAAGT-C-TG--AC-ATT--C-TTTTGCATTAA-AATT------TAA------AA--T--G-GAACCCGT-C-T-TC--C-GGCGGT--C-TTTCC--G-GTACTTTG
gi|19 : ccggaaaaataaggtttacatgcacgtgcctacatCTA-TG-A-CTG-TCAGCAATG--GAAACTA-----------------------GT----TTCT-AAAA--T-GTCTGAA-T----G---AT----GAA-GTAG-CA-GTT----TTTAA--GAT-ACACA-TAAA---GTCTCAGC-AAGTTT-AAACCAC-TA--GTAA--TAG-T-TCGC---A-AGGGTAAA--TAAT---GG-----AACTCCTTTA---AGT-TAAT-A-TTTG--A-TATATTCTCTGCC-CTC-A-GAGGTATGGGGAA-AGCAGGC-CTATGCTA-ATT-A--T-ACTTA-T-ATACT-AGGTAT-A-TTCCAGAC-AAGTGGGA-GT--Tgaatttgtagttgaaccaagctcaacgtaatccatataatccattggagacgcaagcacctcaat
gi|2 : TT-GTTTTTAAA-AA---GGAA---T-AG-AAAACCA-TT--------------G-AATCTCTT-TTTTT--CA-GACGT---TTTA-TTGTAATGC-----TATCG-AAAG----TACATC-TT-GA-T-A-TCGGTACTTT-CAAATT-T-A------GTT-T-TAATTTTTGTTG-A-T-AAAT-TT-ATTTTTA-TGTC------CAAATTT----A-C---GAA--CGA-TTC-AA--CA-T-C----------------TAA-CACT-----GTAA----T-GAT---------CTCT-T-----T-GA-TCTGTTT----AA--CTCAA--TCA---CTTGTTTT---A-CACC--ATG-AGCCGC-AA-TC--CATCATCTC-TA-A-CTG-TCAGCAATG--GAA-CTA------CATATAC-AT-GT-A-TGT-ATGTCCT-AAAA--T-G--TGGA-TAT-AG---AT----GAA-GTAG-CA-GTT----TT-------T-AATC---GA-----------------TT-AA-CGAC-GA--ACTAA-TAGAT-TCGC-----AGGTTAAA-ATAATTTCGAAATCTAACTA-TTCAGCCAGTGTA-T-A-TTCG--ATTATAT-CT-AACC-CTC-a
gi|2 : --TC-------------------ATGGCCCCTCA------TC-CC---TT-GT--G-TAT-----TGGGAAAA-C-GTGCT--GAATTGG-CTA---TT-A----C-A---CGT----A--TA-AG-CA---GAA-AGC-TAGA---TTCGA---AT-GCT-TTTTA--TACTG--CAGGGGTTT-CAAA--TG--CTG--C-AAGGAAT---CA-TTA--A-G---C-C--AT--CGTTCTTTCA-T-A-TATGAACAATTT---C---ATGTCTG-A-TG-AA--TTCAG-AGGGGC-T----TTTGTT-TCGGAAAA-GT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGCACA-T-AAGAT----ACCTA-GAGCATAT-A-----T-GA-CTTTTG-TGTTAC-TAGA--A-TTAT-A--A--TTTCGCT--------AGAC-ATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCG--A-TGTA-CA-T-GTAATATCAT-T-A--AACATACCT-AAAATAA-AGA-AGA-CT-GTTCG-AA-A-CATTA-TTCTAG------TA-C--------A----------A--------A---C----AA-TTATCTT--CATATCA-CTTTA--G-AC-A---ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATATAT-GTAA-CA-A-TG---AAA-A------TG-T----AAAGT-C-TG---A-CTT--A-TTTTG----AA-A--T------TAA---TTC-A--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggatatcatggcccctcatcccttgtgtattgggaaaacgtgctgaattggctattacacgtataagcagaaagctagattcgaatgctttttatactgcaggggtttcaaatgctgcaaggaatcattaagccatcgttctttcatatatgaacaatttcatgtctgatgaattcagaggggcttttgtttcggaaaagtttagtctaatgaattgcacataagatacctagagcatatatgacttttgtgttactagaattataatttcgctagacatttctatttaataatttgaggtgggattcgatgtacatgtaatatcattaaacatacctaaaataaagaagactgttcgaaacattattctagtacaaacaattatcttcatatcactttagacaatgacacaacatttggcatatcaaatatatgtaacaatgaaaatgtaaagtctgacttattttgaaattaattcattgaccccgtctctcagtactctcagtactttgatttc
gi|20 : ttgtttttaaaaaggaatagaaaaccattgaatctctttttttcagacgttttattgtaatgctatcgaaagtacatcttgatatcggtactttcaaatttagttttaatttttgttgataaatttatttttatgtccaaatttacgaacgattcaacatctaacactgtaatgatctctttgatctgtttaactcaatcacttgttttacaccatgagccgcaatccatcatctctaactgtcagcaatggaactacatatacatgtatgtatgtcctaaaatgtggatatagatgaagtagcagtttttaatcgattaacgacgaactaatagattcgcaggttaaaataatttcgaaatctaactattcagccagtgtatattcgattatatctaaccctcttgtggaaatcatattatgttcagtcatactttccttatgaatactattatgtcctatttaagccggtttagtactttatttatgcgacacttgagcggata-TCTATTTAA-T--AATTTGTGGT-GG-A-TTCGA-A-TCTA-CACA-GTAG-ATCAT-T-A--AA-----------------GA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATAACA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-AGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATTtc
gi|21 : T--TGTTCTTTCA-T-AATATGAACCATCT---C---ATGTCTG-A-TG-AA--TTCAG-A-GGGC-G----TTTGTT-TCGGACAA-TT-TT--A-G-----TCT-----------------TA---TTTAAACCTCTTGGAAAAGA-A-TTGCA-A-TAAACAT-AACATCTA-GAGC--AT-A-----T-AATTTTGTG-TG-TAC-TAT---A-TTAC-A--AT-TTTCGCT--------AGACAATT-CCTATTTCA-T--AATTTGAGGT-GG-A-TTCGA-A-TATA-CACT-GTAG-ATCAT-T-C--AAC
gi|22 : G-AA-A-CATAT-TTCTAG------TA-C--------AGTGTATTAAAA--------A---A-A-TAA-T--TCTT--CATATCA-C-TTA--G-AT-TC--ATGAC----A-C-A-AAAT-TT-GGC--A-TA-TT-AA-ATAT-T-GCAA-CA-T-TG-T-AAA-A------TA-T-A--AAAGT-C-TG--AA-CTT--A-TTTTA----AA-A--T------TAA---TTTAA--T--T-GACCTCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGAT
gi|23 : atgtcattgttataccaaaagaaggaagggaagaagatAT-CT-GTTCG-AA-A-CAT-T-TTCTAT------TA-C--------A----------A--------A---C-AATAA-T--TC-----ATATCAGC-TTGAGG-AC-AA--ATGAC----A-C-AGACAT-TTTGGC--A-TAATC-AA-ATAT-C-GTA--CA-T-TG-A-AAA-A------TG-T-A--AAAGT-C-TG--AA-CCTTAA-TTTTG----AA-AT-T------TAA---TTCAACTT--T-GACCCCGT-C-T-CT--CAAGTACT----T---C--ATGTACT
gi|24 : aagcaatA---GTC-CAGC-AATTTT-AA-CCAC-TA--GTAAA-TAG-T-TCGC---A-AGGTTAAA-ATAACT--GG-----AACTC-TTTA---AGT-TA-T-A-TTTG--A-TATAT-CTCTGCCCCTC-A-GAGGTATGGGGAAGAGCAGGC-CTATGCTA-ATT-A--T-AC-TA-T-ATACT-A-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------gat
gi|25 : AATGC----CTATCGCAA-G----TACATCCTT-GA-T-A-TCAGTACTTT-CAAATT-C-A------GTC-T-CAAATTTTGT-G-A-T-AA-TGTT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-Ca
gi|26 : tatctactcttttttgcagaagtttttatgtnnnnnnnnnnnnnnnnnnnnnnnnn----TACATCGCT-GA-CGA-TCGG-ACTTT-CAAATT-T-A------GTT-TTCACATTT-GT-G-A-T-TA------ATATT-A-TGTCATT--CCAAATAT----AGC---GAAA-CGA-T-C-AA--CACT-C----------------TAA-CACTTC---ATA-----T-GAT---------CTCT-T-----T-GA-TCTGTT
gi|27 : gaatgaGT----A--TA-AG-CC---GAAGAGC-TAGA---TTCGA---AT-GCT-TTTTA--TACT-G-TAGGGG-TTTCAAA--TG--CTG--C-A
gi|28 : tacttgcgagacactgacatacatatcctctctccctnnnnnnnnnnnnnnnnnnnnnnnnnctAT-TTTTAAATT---TA-T--------G----------G--------G---C-A-TAA-T--TCTTTTCATA-CA-C-GTA--G-A--ATTCATGAC----A-C-A-CCAG-TT-TGC--A-TA-TC-AA-ATATAT-GTAA-CA-T-TG-GTAAA-A------TG-TAA--AAAGT-C-TG--AACCTT--A-TTTTG----AACA--T------T
gi|29 : TAA-AGA-GGT-AT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------ACTGTTTTA--A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-GTAT-TT-GGC--A-TA-TC-
gi|3 : ctacccagtttgcatTATAGATTTGTTTTGTAA-CA---GAAG-GGT-GG-AAA-CCAATTT-------------GGAATCTCTTCTTTTT--CA-GACGTA--TTTA-TTGTAATG--------------------TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-TTA------GTT-T-CAAATTTT-T-G-A-T-AA-T-TTTATTTT-AATGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-A---CA-TTC----------------TAA-CACT-----ATAATTA-T-GAT---------CTCT-T-----T-GA-TCTGTTT----AA--CTCAA--TAA-ACTGTGTTTT---A-CACCTCATG-AGC-AC-AA-TCT-CATCTTCTC-TA-A-CTG-TCAGCAATGCGAAA-CTA------CATATGCCAT-GTTA-TGT-ATGTTCT-AAAA--T-AT-TGGA-TAT-AG---GT----GAAGGTAG-CA-G-T----TT-AA--GTA-AACCG-GGAA---GAC-CAGC-AA-TTT-AA--CAC-TAATATAAA-TAG-TGTCGC---A-AGGG-ATA-ATAATT--GG-----AACTC-TTCA---AGT-TA-T-ATTTTG--A-TATAT-CTCAGTCACTC-AGGAAGTATGAG--AGAGCAGGC-CTATGC-A-ATT-A--T-AC-TA-T-ATACT-A-GTAT-A-TTTCC-AC-AAG-GGGA-GT--TC-------------------GTGGCCCCTCA------TC-CC---TT-GC--TCCAT-----AGGGAAAT-C-GT-CT--GAATTGG-CTA---TTAA----CAA---CGT----A--TA-AGCCC---GAAGAGCTTAGA---TTCGA---AT-GCA-TTTTA---ACTAGCCAGGGGTTT--AAA--TG--CTG--C-AAGGGCT---CA-------------------------CTTTCA-T-AATATGAACAATTT--TC---ATGTCTG-A-TG-AA--TTCAGAA-GGGC-T----TTTGTT-TCGGACAA-TT-TT--ATG-----T-T-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GAAC--AT-A-----TAGATTTTTTGTTGCTAC-TAGCATA-TT---G--ATATTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGTGGG-A-TTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-TCC-TAAATAATAGA--AT-CT-GTTCGAAA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-C-TAA-T--TCTT--CATATCA-C-TTA--G--C-AT--ATGAC----A-C-A-ACAT-TT-GGCA-A-TA-TC-AA-ATAT-T-GTAA-CA-T-TGAA-AAA-A------TG-T-A--AAAG--C-TG--AA-CTT--A-TTTTG----AA-A---------TAA---ATCAA--C--T-GACCCCGT-C-T-CTTCC-AGTACT--C-T---C--A-GTACTTTGATT
gi|30 : -AA--GAT-AACCA-GGAAA--GTT-CGGT-AATTTT-AA-CCAC-TA--ATAAA-TAG-T-TCGT---A-AGGTTAAA-ATAATT--GG-----AACTA-TTCA---AGT-TA-T-A-TTTG--A-TATAT-TTCAATCA
gi|31 : C---TT-GC--T-CAT-----AGGGAAAT-C-AT-CT--GAATTGG-CAA---TT-A----C-A---CGTATACA--TA-AG-CC---GAAGAGC-TAGA---TTCAA---AT-GCA-TTTTA--TACT-G-CAGGAG-CTTCAAA--TG--
gi|33 : TA--G-AC-CC--ATGAC----A---A-ACAT-TT-G-C--A-TA-TC-AA-ATAT-TTATAAACA-T-GC-G-AAA-A------TG-T-A--AAAGT-C-TG--TA-ATC--A-TTTTT----AA-A--T------TAA---GTTAA--T--T-GACCC
gi|35 : -ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-A--ATAGT-C-TT--AA--TT--A-CTTT---------------------------AA--T--T-GACCATGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTG
gi|36 : CTA-TG-A-CTG-TCAGCAATG--GAA-TTA---------------------------TGTTCT-TAAA--T-GT-TGGA-TAT-AG---AT----GAA-GGAG-CA-GTT----TT-AA--AAT-
gi|37 : cgT--CATATCA-C-TTA--G-AC-AC--ATGAC----A-CAA-ACAT-TT-GAC--A-TA-TC-AC-ATA----GTAATCG-TATG-G-AAG-G------TG-
gi|38 : TT--A-TTGTG----AA----T------TAA---TTCAA--T--TAGACCCCGT-C-T--T--C-AGTACT--CTT---C--A-GTACTTTG
gi|4 : TATAGATT-GTTTTTTAA-CA---GAA----T-GA-AA--CCA-TTT-------------G-AATCTCTTCTTTTTTCCA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATT-T-A------GTT-T-CAAATTTTGT-G-A-T-AA-T-TT-AATTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-A---CA-T-C----------------TCA-CACT-----GTA-----T-GAT---------CTCT-T-----TTGA-TCTGTTT----A---CTCAA--TAC-ACTTTGTTTT---A-CACCTCATG-AGCCGC-AAATCT-CATCATCTC-TA-A-CTG-TCAGCAATG--GAA-CTA------CATATAC-AT-GT-A-TGT-ATGTCCT-AAAA--T-GT-TGGA-TAT-AG---AT----GAA-GTAG-CA-GTT----TA-AA--GAA-TACCA-GGAA---GTC-CAGC-AATTTT-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGGTTAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-T-A-TT-G--A-TATAT--TCAGCCACTC-A-AAAGTATGGGGAAGAACAGGC-CTATGCTT-ATT-A--C-AC-TA-T-A-ACT-A-GTAT-A-TTCCA-AC-AAGTGGAA-GT--TC-------------------ATGGCCCAT-A------TC-C----TT-GC--T-CAT-----AGGGAAAT-C-GT-CT--AAAT-GG-CTA---TT-A----C-A----GT----A--TA-AG-CCC--GAAGAGC-TAGA---TTCGA---AT-GCA-TTTTA--TACTGG-CAGGGGTTTTCAAA--TG--CTG--C-AAGGAAT---C-ATTA--A-G---C-A--AT--CGTTCTTTCA-T--ATATAAACAATTT--TC---ATGTCTG-A-TA-AAATTCCAG-A-GGGT-T----TTTGTT-TCGGAAAC-TT-TT--T-G-----TCT-----------------AA---T-----------------GA-A-TTGCA-A-TAAAGAT-AACACCTA-GATC--AT-A-----T-GATTTTTTG-TG-TAC-TAC---A-TTAT-A--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GA-A-TTTGA-A-TGTT-CAAT-GTAG-ATCAT-T-A--AACAT-CCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---C-A-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATAT-T-GTAA-CA-T-TG-A-AAA-A------TG-T-G--AAAGT-C-TG--AA-CTT--A-TTTTG----AA-A--T------TAA---TTTAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|40 : AT-----AGCGAAAT-C-AT-TT--GAATTGG-CTA---TT-A----A-A---CGT----A--TA-AG-CC---GAA
gi|41 : --T--T-GAACCCGTTC-T-CT--C-AGTACTT-C-T---C--A-GTACTTTGATT
gi|42 : --T-GACCCCGT-C-T-CT--C-AGCACT--C-T---C--A-GTACTTAGA
gi|5 : ATAGATT-TGTTTTTAA-CA---GAAG-GGT-GGGAA--CCA-TTT-------------G-AATCTCTTCTTT----CA-GACGT---TTTA-TTGTAATG--------------------TACATC-TT-GA-T-A-TCGTTACTTT-CAAATT-T-A------GTT-T-CAAATTTTGTTG-A-A-AT-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-CGA-TTC-AA--CA-T-C----------------TAA-CACT-----ATA-----T-GAT---------CTCTGT-----T-GA-TCTGTTT----AA--CTCAA--TAA-ACT--GTTTT---A-CAT-TCATG-AGCCAC-AACTCT-CATCTTCTC-TA-A-CTGGTCAGCAATG--GAA-CTA------CATATGC-AT-GT-A-TGT-ATGTTCT-AAAA--A-TT-TGGA-TAT-AG---GT----GAA-GTAG-CA-GTT----T--AA--GAA-AAACA-GGAA---GAC-CAGC-AATTTT-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A--GGATAAA--TAATT--GG-----AACTC-TTCAGT-AGT-TA-TTA-TTTG--A-TA-AT-CTCAGTCACTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTATCTT-A--T-AC-TA-T-ATACTTA-GTAT-A-TTCCA-AC-AAGTGGGA-GT--TC-------------------ATGGCCCCTCA------TC-CC---TT-GC--T-CAT-----AGGGAA-T-C-GT-CT--GAATTGG-CTA---TT-A----C-A---CGT----A--TA-AG-CC---GAAG-GC-TAGA---TTCGA---ATTGCA-TTTTA--TACTG--CAGGGGTTT-CAAA--TG--CTG--C-AAGGAAT---CAATTA--------CAC--AT--CGTTCTTTCA-T-AATATGAACAATTT---C---GTGTCTG-AATG-A---TTCAG-A-GGGC-T----TTTGTT-TCGGACAA-TT-TT--A-G-----TTTT----------------AA---T-----------------GA-A-TTGCA-A-TAA-GAT-AACAC-TA-GAAC--A--A-----T-GATTTT--G--G-TAC-TAG---A-TTAT-G--AT-TTTCGCT--------AGACAATT-TCTATTTAA-T--AATTTGAGGT-GG-ATTTCGA-A-TTTA-CACT-GTAG-ATCAT-T-A--AACAT-CCT--AAATAA-AGA-TAT-CT-GTTCG-AA-A-CATAT-TTCTAG------TA-C--------A----------A--------A---CAA-TAA-T--TCTT--CATATCA-C-TTA--G-AC-AT--ATGAC----A-C-A-ACAT-TT-GGC--A-TA-TC-AA-ATA--T-GTGA-CA---TG-A-AAA-A------TG-T----AACGT-C-TG--AA-CTT--ATTTTTG----AA-A--T------TAA---TTCAA--T--T-GACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|6 : TATAGATT-GTTTT--AATCA---GAAG-G-T-G--AA--CCA-TT----------------AATCTCTTCTTTTC--AA-GAAGT---TTTA-TT-TAATG--------------------TACATCCT--GA-T-A-TCGGTACTTT-CAAATTAT-A------GTT-T-CAA-TTTTGT---A-T-AA-T-TTTAATTT-A-T--CATT--CCAAATAT----A-C---GAAA-CG--TTC-AAAACA-T-C----------------TA--CACT-----ATA-----T-AAT---------CTCT-T-----T-GA-TCT--TT----AATACTCAAAATAA-AC---GTTTT---AACACCTCATG-AGCCAC-AA-TCT-CATCTTCTC-TA-AACT--TCAGCAATG---AA-CTA------CATATGC-ATAGT---TGT-ATGTTCT-TAAA--T-AT-TGGAATAT-AG---GT-----AA-GTAG-CA-GTT----TT-AA--GAA-AACCA-GGAA---A---CAGC-AATTTT-AA-CCAC-TA--ATAAA-TAG-T--CGC---C-AGGATAAATATA-TT--G------AACTC-T-CA---AGT--A---A-TTT---A-TAAATTCTCA-TCGCTC-A-GAAGTATGAGGAAGAGCAGGC-CTATGCTA-ATT-AATT-AC-TA-T-ATACT-A-GTATTA-TTCCA-AC-AAGTGG-A-GT--TC-------------------GTGGCCCCTCA------TC-CC---TTCGC--T-CAT-----AGG-AAAT-C-GT-CT--GAAT-GG-CTA---TT-A----C-A---CGT----A--TA-AG-CC---GAAGAGC-TAGA---TTCGA---AT-GCATTTTTA--TACT-G-CAGGGG-TTTCAAA--TG--CTG--C-AAGGAAT---CAATTA--AGG---C-C--AT--CTTTCTTTCA-T-AATATGAACCAATT--TC---ATGTCTG-A-TG-AA--TTCAG-A-GGGC-T----TTTGTT-TCGGACCA-AT-TT--A-G-----TCT-----------------AA---T-----------------GA-A-TTGC----CAAAGAT-AACACCTA-AAAC--ATAA-----T-GATTTTTTG-T--TAC-TAG---ATTTAT-G--AT-TTTCGCT--------AGACAATT-TCTATTTAATT--AATTTGAGG--GG-A-TTCGA-A-TTTA-C-CT-GTA--ATCAT-T-A--AACATGCCTAAAAATAA-A-A-TAT-CT-GTTCG-AAGA-C-TATATTCTAG------TA-C--------A----------A--------A---C-A-TAATT--TCTT--CATATCA-C-TTA--GAAC-AT--ATGAC----A-C-A-ACAT-TC--GC--A-TA-TCAAA-ATAT-T--TAA-CA-T-TG-A-AAA-AG-----TG-T-A--AAATT-CATG--AA-C-T--A-TTTTG-----A-A--T------TAAT--TTCAA--T--G-AACCCCGT-C-T-CT--C-AGTACT--C-T---C--A-GTACTTTGATT
gi|7 : TAGATT--TGTTTTAA-CA---GAAG-G-TTGA-AA--CCA-TTTTT-----------G-AATTTCTTCTTTT---CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TA-ATCCTT--A-T-A-TCGGTACTTT---------------------T-CAAATTTTGT-G-AAT-AA-T-TT-ATTTT-A-TGTCATT--CCAAATAT----A-C---GAAAACGA-TTC-AA--CA-T-T----------------CTA-CACT-----GTAA----T-GAT---------CTCT-T-----G-GA-TCTGTTT----AA--CTCAA--TAACACTTTGTTTT---A-CACCTCATG-AGCCGT-AA-TCT-CATCATCTC-TT-A-ATG-TCAGCAATG--GAA-CTA------CATATAC-A--GT-A-TTC-ATG-TCC-AAAATTT-GT-TGGA-TAT-AG---AT----GAA-GTAG-CA-GTT----TT-AA--GA--AACCA-GGAA---GT--CAGC-AATTTT-AA-CCAC-TA--ACTAA-TAGTT-TCGC---A-AGGGTTAA-ATAATT--GG-----AACTC-TTCA---A-T-TATT-C-TTTG--ATTATAT-CTCAGCCACTC-A-GAAGTAT-GGGAAGAG-AGGC-CTATGCTA-TTT-A--CAAC-TA-T-ATACT-A-GTAT-A-TTCCA-A--AAGTGGAA-GTTGTC-------------------ATGGCCCCTCA------TC-TC---TT-GC--T-CAT-----AGGG-AAT-C-GT-CTCGGAATTGGTTTA---TT-A----C-A---CGT----A--TA-AG-CC---GAAGAGC-TAGA---TTCGA---ATGGCA-TTGTA--TACTTG-CAGGGGTGTTCAAA--TG--CTG--CAAAGGAAT---CAATTATCA-G-----C--AT--CCTCTTTTCA-TAAATATGAA-AA-TT--TC---A-GTCTG-A-TG-AA--TTCAG-A-GGG--T----TTTGTT-TCGGAAAA-TT-TT--A-G-----TCT-----------------AA---T-----------------GA-ATTTGCA-A-TAAAGAT-AACACCTA-G
gi|8 : cTATAGATT-TGTTTTTAA-CA---GAAG-GAT-GT-AA--CCA-TTT-------------G-AATCTCTTCTTTTT--CA-GACGT---TTTA-TTGTAATGC----CTATCG-AAAG----TACATCCTT-GA-T-A-TCGGTACTTT-CAAATC-T-A------GTT-T-CAAATTTTGG-G-A-T-AA-T-TTTATTTT-A-TGTCATT--CCAAATAT----A-C---GAAA-AGA-TTC-AA--CA-T-C----------------TGA-CACT-----GTG-----T-GAT---------CTCT-T-----T-GA-TCTGTTT----AA--CTCAA--TAC-ACTTTGTTTT---A-CACCTCATA-AGTCGC-AA-TTT-CATCATCTC-TT-A-CTG-TCAGCAATG--GAA-CTA------CATATAC-AT-GT-A-TGT-ATGTCCT-AAAA--T-GT-TGGA-TAT-AG---AT----GAA-GTAG-CA-GTT----TT-AA--GAT-ATGCA-GGAA---GTC-CAGC-AATTCT-AA-CCAC-TA--ATAAA-TAG-T-TCGC---A-AGG-TAAA-ATAATT--GG-----AACTC-TTCA---AGT-TA-T-A-TTTG--A-TATAT-CTCAGTCACTC-A-GAAGTATGGGGAAGAGCAGGC-CTATGCTA-ATC-A--C-AC-TC-T-ATGCT-A-GTAT-A-TTCCA-AC-AAGTGGAA-GT--TCATGTAGGGGAGGGTGCTGAGTGGCCCCGAACGATGTTG-CCAGTTT-GC--TCCAT-----TGGGAAATGC-GT-CT--GAATGGC-CTAAATTC-AGCTCC-C---TGT----A--TA-AG-CCACGAAAGAG
gi|9 : aT-A-GTAT-A-TTCCA-ACCAAGTGGGA-GT--TC-------------------GTGGCCC-TCA------TCGCC---TT-GCATT-CAC-----AGGGAAAT-G-CT-CT--GAATTG--CTA---TT-A----C-A---TGT----AAACA-AG-CC----AAGAGC-TAGA---TTCGACGCAT-GCA-TT--A--TACTG--CAGGGGTTT-CAAAAATGGCCTG--C-AAGGAA----CAATTA--A-G---C-CCCAT--CGTTCTTC---T-AAT-CGAA-AATT----C---ATGTCTGGA-TG-A---TTCAG-A-GGGC-TCTTTTTTGTTGTCGGACAAATT-TT--AAG-----TCT-----------------AA---T-----------------GA-A-TTGCA-AATAAAG-T-AACACCTA-GAACC-AT-A-----T-GATTCTTTG-TG-TAT-AAG---A-T-AT-G--AT-TT-CGCT--------AGACAATT-TCTATT-AA-T--AATTTGAGGT--G-A-TTCGAGA-TTTA-CACT-GTAG-A-CAC-T-T--AACATCCCT-AAAATAA-AGA-GAT-CT-GTTCG-AA-A--ATAT-TTCTAG------TA-C--------A----------A--------A---C---TAATT--TCTT--AATATCA-CGTGA--G-AC--T--ATGACCACTA-C-A-ACATCTT-GGC--A-TA-TC-AA-A-ATAT-GTAA-CA-T-TG-G-AAA-AAGATTTTA-A-A--AAAGTCC-TG--AA-CTA--A-TATTG-----A-A--T------TAATATTTC-A--T--T-GACCCCGTACGT-CT--C-AGTACTTAC-T---CCGG-GTACTTTG
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): AATAAATAATCATCTAATCTGTTTTTTTTGGTTTAATGTAAGCTATCGCAAGACGTTATCTCGGCCTACGGTATTCAAATTTACTTTATTCTTGT
Unaligned ( gi|34 ): TGTTAACTTACCATGTATAGTTCTTTCTGGTGCACACACCTCAATTGTTTGATTTCCAGAATCGTTTATCACACAATGATATTTAAT
Unaligned ( gi|39 ): TTTTATCATTGTAAGCGTGCGATGAAATTGACGAATTATTTTGT