lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111 11111111111111111111111111111111111111111111111111111111 1111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111
lowQualScore : 111 333333333 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1 1 2222 111 11 555555555555555 11 3333333333333333 555555555555555 11 222222 1 111111 555555555555 11 22222222222222 55555555555555 11 1 3333333333333333 11 55555555555555555 111 1 1 22222 111 1111 11111111 1111 222222 333 111 444444444444444444 1 1 11 11 3333 111 11 11111 33333333333 22222 11 88888888888888888888888 1 22 1 2 1 4444444 11111111111111111111111111111 11 2222 22222 55555555 11 11 5555555555555 111 2222 1 88888888 222222 1 1 1 1 11 22222222222222222222222222222222222222222222222222222222 333 555555 2 4444 1 1 1 11 1 1 1 44444444444444444 1111 1 1 222 11111111 111 55555555555555 2222 111 1 77777777777777777777777777777777777777777777777777777 2 2 44 2 2 222 666 4 4 4 4 0000000 4 4 1 4444 1 1 222 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 11 1 2 1 11 111 4444444 555555555555555555555555555 1 111 4444444444444444444444444444444444 11 11 9999999999999999999999 1 1 1 2 33 222 2222 1111 44444444444 1 1 11 555555555555 1 1 11 2222222222 11 777777777777777 11 111 1
lowQualScore : 6 6 6 99 6 111 6 999999999 2 3 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 3 3 8888 777 0 6666 444 11 3 000000000000000 11 8 6666666666666666 8 22 555555555555555 5 22 11 2 6 6 333333 6 8 2 2 999999 7 6 000000000000 22 6 99999999999999 0 11111111111111 11 8 0 0 1 8888888888888888 0 5 3 11 999 2 77777777777777777 777 0 3 0 3 0 55555 3 444 5555 3 8 77777777 7777 000000 2 0 7 7 777 777 666666666666666666 0 0 33 33 2222 111 8 33 88888 66666666666 22222 2 33 33 22222222222222222222222 3 00 3 3 6 3 7 6 3333333 6 00000000000000000000000000000 33 3 99 0 33 4 1111 55 55555 44444444 33 33 2 4444444444444 777 3 8888 0 33333333 0 111111 3 5 3 6 7 7 7 7 3 55 88888888888888888888888888888888888888888888888888888888 555 222222 0 6666 8 3 3 3 3 88 6 3 3 6 3 3 3 44444444444444444 7777 99 4 0 6 333 88888888 000 1 22222222222222 8888 7 888 3 88888888888888888888888888888888888888888888888888888 0 2 0 77 0 3 0 88 666 111 0 0 0 0 5555555 0 0 4 3 6666 3 6 333 6 6 6 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 00 3 6 6 6 2 88 8 555 3333333 7 7 7 444444444444444444444444444 3 999 0 5555555555555555555555555555555555 44 88 6666666666666666666666 0 0 3 0 6 00 8 111 66 99 1111 4444 11111111111 0 0 9 3 0 22 444444444444 0 0 99 5 8888888888 11 555555555555555 44 333 3 7777 3
lowQualScore : . . . .. . ... . ......... . . .................................................................................................................. . . .... ... . .... ... .. . ............... .. . ................ . .. ............... . .. .. . . . ...... . . . . ...... . . ............ .. . .............. . .............. .. . . . . ................ . . . .. ... . ................. ... . . . . . ..... . ... .... . . ........ .... ...... . . . . ... ... .................. . . .. .. .... ... . .. ..... ........... ..... . .. .. ....................... . .. . . . . . . ....... . ............................. .. . .. . .. . .... .. ..... ........ .. .. . ............. ... . .... . ........ . ...... . . . . . . . . . .. ........................................................ ... ...... . .... . . . . . .. . . . . . . . ................. .... .. . . . ... ........ ... . .............. .... . ... . ..................................................... . . . .. . . . .. ... ... . . . . ....... . . . . .... . . ... . . . .......................................................................................... . .. . . . . . .. . ... ....... . . . ........................... . ... . .................................. .. .. ...................... . . . . . .. . ... .. .. .... .... ........... . . . . . .. ............ . . .. . .......... .. ............... .. ... . .... .
lowQualScore : 0 7 7 22 7 777 7 222222222 5 2 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 5 2222 222 0 4444 000 00 8 000000000000000 00 0 0000000000000000 0 22 666666666666666 0 88 22 5 7 7 888888 7 3 2 5 222222 5 7 555555555555 44 3 22222222222222 8 22222222222222 00 0 8 8 4 0000000000000000 8 6 0 00 888 0 55555555555555555 555 8 5 0 2 0 55555 8 000 0000 2 2 88888888 5555 222222 5 7 0 3 333 555 555555555555555555 0 0 55 88 5555 222 8 00 55555 22222222222 22222 0 88 55 88888888888888888888888 3 00 3 3 7 3 3 7 7777777 7 33333333333333333333333333333 88 2 55 8 22 5 2222 88 00000 55555555 88 88 5 5555555555555 555 2 0000 0 22222222 7 000000 3 0 3 7 3 3 3 3 3 55 55555555555555555555555555555555555555555555555555555555 000 555555 0 0000 3 3 7 3 3 33 7 3 3 7 3 2 2 88888888888888888 8888 55 0 0 0 333 33333333 000 0 00000000000000 3333 0 333 3 33333333333333333333333333333333333333333333333333333 0 5 0 55 0 0 0 00 555 000 0 0 0 0 0000000 0 0 0 3 7777 3 0 333 7 7 7 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 3 77 3 7 7 7 0 33 3 777 3333333 3 0 3 777777777777777777777777777 3 000 7 7777777777777777777777777777777777 33 33 0000000000000000000000 0 0 2 0 7 33 0 222 88 66 2222 0000 22222222222 0 0 8 2 2 00 888888888888 0 0 00 6 0000000000 22 000000000000000 00 000 0 3333 3
consensus : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG------TATCCCAAGCTTTTGATGTA-TAAT-AA-ATGGGGACGT-ATGCGTTAAANACAACGGATGNCAACGATTAGCCNANTNANTNCGNNNTTNGNTTTAANNNCCTNCNNGNANANACGTNNTNNANCNATTANCCAGGTTATTAGTACGGTACTT-AAACAAATATTGNCACAC--G-AA---AA--AAGAG---------------GG--GGG-GGA-----AT------A--TT-CATAGGTAT---AT--------GTACACGATGTATCAAAAGTTGATGCTCTT-CAAATTAA-ACTG--C-ATGCAATTACGAT-GATTATAATCCCTTGTTACAGTGCA-GGTAAAATTCGATCTT-TGAAAGTTCCCTGG-CAGTTGT-AGGCT-GTATAANGCAA-TG-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-----T--G-ATAAGAAATGCTGCA--C-ATGCATGATTTTCTCATGAATTTCAATATAATTCC--------CA---ACGNT-ACCATT-ATGATT-CTTGGTAA---ATAAGGACAATTAATACAC--ATGT-A-CATT--T-CTGGTCAGAGATATACGTCACACAAAGTCAGAGAATG-AAAACGA---GGAGGG-----GG------ATGTATA-CGC-CTNAAAT--CATG---GAGATCAGGCTAAATAATN-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCTGG--GTGACTTCCCAACGTTTCA-TCC--GG-ATACTT-AGAT-GGGAAAG-AAAT-GAAAT-TTTCATCAACTGAA-CTAAATATTAGCATATTTTTTT-T-AT-ATGTTCAGACGTAC-G--TCATCT--GAAGTATA----TG--TTTTCA--ATGACAATTGCGTGT----TATTAGTTTACATNAAATG----TG-AAGAACTCG--TAAG--ACGTACGAAATTT-----AA--TTCTTTT---GTATTTAT---TA-TATACAATA-AAA----ATACG--TTCAAAGTTCAA-ACCAAATCAAATG-TCAGCCGTGTTACATGTTGC-ACATGCNNCCTCC-------AAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCAATAAGAGCGAGCCTCGGTGGAGTTAATGCGATCCCAAGAACTTTAG-TGCCGTCCGAACC-TAT-TTTCTCCAC--CGCAA-GAA-TCCTTGAACAGC-ACAAACTTCGAATCCATTTGAATTTCTT-TNA-CA-TACATGT--AA--C-TTGAGNTCAAATANTG-AAATAAAAT-AAT---TAG--TTTGA-TCCAGCGATTTTGAGAAAAAGAGGGGGGGGG-G-----CGCGCTAGATCAT----ATCCGACG-AATCGCTAAAT-AT----------TTA-TC--C-AT-A---ACTATTGANNNATTACTTAAGACTTTTTATTNAACATTTTTTCGTGGGGTAAATTTCCAANCTGCCNNTGATGTTCAAGAGGGGAAGGGGCAGTGCAT-GGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCT-AAATGGAATG---GCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAA-AAAA---CGC-AGGAATTCAGAA-TT---ATAATTATGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCC-GA-CTGTCAT--------------T--------------ATTACTGCTCTGCCGTTCAC-AAACTGTCATAGAGTTGGAAATTGA--GAAAATACGTTCCCT-------TTACACAAGCTGCCTAAAGACAAATACAGCT-AGGCGAAA-CGTT-G-A-TTCGCG-TTCATC-AAGTAGGGGGGGGGGG----ACAA-AGGACG-GAAACTTGG-AA-CTAACAAGTTA--TGCACGTAC-TGTAC----ATG-TG--TT-AAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATT----AATAA--AAANAA----TTTGCCCGT-AAA-CAAATATTTGACT-TATTTTT-TT--------GTTTA-CGGG-AGGATTTTTTTTTTTA-----T----CAAATGTATT-TC-A---AAA-C--GTCAAGT-A-CCTTGATCGCAGGGGGTATGT-ACAT
Reference ( gi|1 ) : ATTCCGGATTTTCGTAACT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGAACG------TATCCCAAGCTTTTGATGTA-TAATAAA-ATGGGAACAT-ATGCATTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTTATTAGTACAGTACTT-AAACAAATATTGGCACAC--G-AA---AA--AAGAG---------------GG--GGG-GGA-----AT------A--TT-CATAGGTA----AT--------ATACACGATATATCAAAAGTTGATGCTCTT-CAAATTAA-ACTA--C-ATGCAATTACGAT-GATTAAATTCCCTTGTTACAATGCA-GGTAAAATTCAATCTT-TGAAAGTTCCCTGG-CAGTTGT-AAGCT-ATATAAGGCG--TG-CTTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-----T--G-ATAAGAAATGCTGTA--C-ATGCATGGTTTTCTCATGAATTTCAATATAATTTC--------CA---ATGAT-ACCATT-ATGATC-TTTGGTAA---ATAAGGACAACTAATAAAC--ATGT-A-CATT--T-TTGGTCAGAGATACAAGTCACACAAAGTCAGAGAAAT-AAAATGA---GGAGGG-----AG------ATGTATA-CGC-CAAAAAT--CATT---GATATCAGACTAAATCATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCACTCC-AAAAATACTT-AGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCATATTTTTTTCTGGT-ATGTTCAGACGTA--G--TCATCT--AAAGTAT-----TGA-TTTTCA--ATGACAATTGTGTAT----TATTAGTTTATATTAAAT-----TG-AAGAACTCG--TAAG--ATGTACGAACTTT-----CA--TTCTTTT---GTATTTAC---TA-TATACAATACAAATTTTATACG--TTCGAAGTTCAA-ACCAAATCCAATG-TCAGCTGTGTTACATGTTGC-ACATGCTTCCTCC---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAG---GAATCTC---G--ATTAAT-CG--T-CAAGTACTTTAG-TGCCGTCCGAACC-TAT-TTTCTCCAC--CGCAA-GAA-TCCTTGAACAGC-ACAAACTTCGAATCCATTTGAATTTCTT-TTT-CA-TACATGT--AA--C-TTGAGTTCAAATAATG-AAATAAAATAAAT---TAG--TTTGA-TCCAGCGATTTTGAAAAAAAAAGGGGGGGGGTG-----TGTGCTAGATCAT----ATCAAACG-AATCGCTAAAT-AT----------TTA-TC--C-AT-A---ACTATTGAACAA--ACTTAAGAC---TTA-TGAACA-TTTTTTGT--GGTAAATTTTT-ATCTG-CATTGATGTTCAA-AGAAGAAGGGG--ATGCATGGGGTTTCC-AATCCCCAGTG-CGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGC--CATTCTAGCATGG-TGATAACAAGTTATCA-TAATAAACTAA-AAA----TGC-AGGAATTCAGAAATT---ATAATTCTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAG-TTTTCA-C--GA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCAC-AA-CTGTCCTAGAGTTGGAAATTGA--GAAAATTCGTTTCCT-------TTACACAAGCTGCATAAAGACAAAT-CAACT-AGGCGAAA-CGT--G-A-TTCGCG-TTCATC-AAGCAGGGGGGGGGGGGGAGAGAGAAGAATGGAAAACTT---AA-TTAACAAGTTA--TGCACGTACATGTAC-CGTATG-TG--TTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACACTGCAC-TTGAC--ATTTTATAAAGCATT----AATAA--AAATGA----TTTGCCCGT-AAA-CAAATATTTGACT-CATTTTTGTT--------GTTTA-CGGG-AGGATTTTTTTTTTTA-----T----CAAATGTATT-TC-ACTTGAA-C--GTCAAGT-A-CTTTGATCGCAGGGGATATGT-ACAT
gi|3 : ATTCCGGATTTGCGTTATT-CTTGCGTTA--T-ACGAGTTG-CGTTC---GTG-CGGGA-CGGCTTGATATCCCAAGCTTT-GATGTA-TTGTCAT-AAGGGGACGTTATGCATTAAAACACGGATGGATACGATCATTAGTCCGATTACTGAGTACTCGGTTTAAAGTGCTAACCGGATAGACAAGTTGTAACCATTATC-AGCTTATTAGT-C-GTACCTCAAACAAATATTG-CACAC--G-AA---AATTAGGAA---------------GG--AGGCAGA-----GT------A--TTTCATAGGTATATCAT--------GTACACGATATATCAA--GTGGGT-CTCTTGCAAATTAATAC----C-ATGCATTTACGATTGAT-AAATTCC--TGTTACAATGCAAGGTAAAATTCGATCTTATGAAAGTCCCTAGG-C-GCTGTTAGGCTGATATAAAGCAA-TG-ACGA----AAATAAA-CTACAGCAAT--AGGGCACAGTATTACCC-TCATACTCT-GCGAGT-----A--G-ATAAGAA-TGC-GCA--CTAGGCAGGATTTTCTCATGAATTTCAAT-TAATTCCCAGCCAAGCA---AGGTT-ACCATT-ATGAAT-CTTGGT-A---ATA---CCAATTA--AACC--ATGT-A--ATTTAT-CTG---AGCGATATACGTCACACAA--TCAGAGAATG-AAAATAAGAGGGAGGG-----AGGATCGAAT-TATACCGCGCACAAATTGCATGAGAGATA-CAGGCTAAATAATGATATCTTCGCT---GAT-A-AC----C-ATGTT--C--CTTGGCAGTGACT----AA--------TCC--AGCATAC-T-AGCT-GGGAAAGAAAATAGAAAT-TTTCAT--ACTGAA-CTAAAAATTAG---ATTATTT--TAATAATATTCAGAC-TAC-G--TCATCTAAAAAGTATA----TGACTTTTCAATATGG-AACTTCATCTAAGATATTACTTTGCA--AAATG----TA-ACGATATCGATTAAGGAACAGACGGAATTTATTTAAA--TTCTTTTGTAGTATTTA----TA-TATACCATA-AAA----ATATG--T--AAAGTTTCA-ACCAAATCAAATGATCAGCCG-G--ACATG--GCAACATGTCATCTCC-------AAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCAATAAGAGCAAGCCTC---GGAGTTAATGCGATC-CAAGAACTTTAG-TGCGGTCTGAACCATATATTTCTCCACGACG-AA-GAAGTAATTGAACAGC-ACAAACTTCG-ATCCA-TGGAATTTCTT-TTA-CATTACATGTTAAA--CATTGA-TTAAATTAATGAAAATTAAATTAAT---TAG--TT----TCCAGCGATTTTAAGAAAAA
gi|6 : TTCCGGAGTTTCGTAATT-TTTGC-TTA--TTACGATTTGTCGTTC---GTG-CAGGACGG------TATCCCAAGCTTTTGTTGTA-------A-ATG------T-GTGCGTTGAATACAACGGATGACAACGATTAGCCTACTGAGTACTCGGTTTAAAGTGCTAACCTGCTAGACAATTTGTAACCGATTAATC----AGGTTATTAGTATGGTA-------------TTGGCACACCCA-AA---AA--AAGAG---------------GAAAGGG-GGAGGGGTAT------A--TT-CAAAAGTAT---GT--------ATAAACGATGTATAAACAGTTCGTGCTTTT-CAAATTAA-ACTG--CCATGCAATTACGAT-GATTATAATCCCTTGTTACAGTGCA-GGTAAAATTCGATCTT-TGAAAGTTCCTTGG-CAGTTAT-AGGCT-GTATAAAG
gi|4 : CCGGATTTTCGTAATT-CTTGC-TTAAAT-ACGAGTTGTCGTTC---GTG-CGGGACGG------TATCCCAAGCTTTTGATGTA-TAA------------CGC-ATG--TTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTTATTAGTACTGTACTT-AAACAACTATTGTCACAC--ACAA---AA--AAGAGAGAGAGAGGGGGGGGGG--GGG-GGA-----AT------G--TT-CAAAGGTA-----T--------GTACACGATGGTTAAAAAGTTGATTCTCTT-CAAATTAA-ACTG--CCATACAATTACGAT-GATTATAATCCCTTGTTACAGTGTA-GGTAAACTTCGATCTT-TGAAAGTTCCCTG------------GCT-GCATAAGGCA--TG-CGTA----AAATA---------------AGG--ACAGTATTACCC-TGATAATCTTGCGAGTGTGGAT--G-A-AGGAAATGCTGCAGCC-ATGCATGGTTTTCTCATGAATTTCAA-ATAATTT---------CA---ATGAT-ACT-TT-AATATCTTTTGGTAAACTATAAGGAC-ATTAATTCAC--ATGTGA-CATT--TCTTGGTCAGAAA
gi|5 : GATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTGGCGGGACGG------TATCC-AGGCTTTTGATGTAATAATAAAGATGGGAACAT-ATGCATTAAAAACAACGGATGGCAACGATTAGCCGATTAACTGTGTACTCGGTTTAAAGTGCAACCGGATAGACAATTTGTACACCGATTAATCAGGTTATTAGTACAGTACTT-AAACAAA-ATTGGCACAC--G-AA---AA--A---G---------------GG--GGG-GTA-----AT------AATTT-CATAGGTA----ATGTATATATATACACGATATATCAAAAGTTGATGCTCTT-CAAATTAA-ACTA--C-ATGCAA-TACG-T-GATTAAATT-CCTTGTTACATCGCA-GGTAAAATTCGATCTT-TGAAAGTTCCCTGG-CA-TTGT-AGGCT-GTataatgaagggtgtgtgtgtgggggggggtggggggggggggggggggggggtacgtcctaaatcatggagatcagactaaataatttatcttcatgatacattatgtttcctgagtgacttcccaacatttctcctggaaatacttcggatgaaaaaaaatgaaaggtttcaccaactgaactaaatataagcatttatttttcttatatgttcagacgtacattcatctgaagtatatcattacttttcaatgacaattgtgtgttattagtttatattatataaaaaggaagaactcgtaagatgtacgaactttaattcttttgtatttatcatatacaataaaaatacgttcaaagttcaaaccaaatcaaaagtcagctgtgttacatgttgtaca
gi|21 : TCGTAATTTCTTGC-ATG--T-ACGAAATGTCGTTCCGAGTG-CGGGACAG------TATCg
gi|15 : T-CTTGC-TTA--T-ACAGGTTGTCGTTC---GTG-ACGGACGG------TAT
gi|8 : t-AAACAAATTCTGTCATACATG-AACAGAA--AAGGG---------------GA--GGG-GGA-----GTCAAAAAA--TT-TGT---TA----AT---------CA-ATGACTGATCAGA-TTTGATGATCTT-CAAAGTAA-CTTC--C-ATACAATTGCGAT-AATTATA-CCTCATGTTTCAA------ATAAAAC----TCTG-TAAAAATT-CCTGGTCAG-------GCT-TTATAATGCA--TA-TGTAAATTAAATAAA-CTAC--C------GG--GCAGTATTACAC-AGATAA----GAGTGT-----T--G-ATAA-CAATTCTACA--C--TGCAgataatatgaaggtggggacgcatataaatgggttaaacataacggatggcaacgatatgactactacccagtgctcggttaaaatctaaccggttcggttagccaggctcttag
gi|11 : TGACGGCTTT-TAAATTAA-AC-AGGC-ATGCAATTAAGAT-AATTATAATCTATT-TTATA------GGTAAAATTCGATCTT-TGAAAGTTCCCAGT-CTGTT------TT-CTATAATACA--TG-CGTA----AAATAAA-TT-C--C--T---GG--GCAGTACTTCTT-TAATAATATAGAGTGC-----T--G-------CACGCGATG--C-AAGCATAATTTTTATATGAATTCCAAT-TA----T--------CAGATATGATAACCAGTAATG-----CTGGTGA---ATAAaaca
gi|2 : GCT-GTATAAAGGGATTGGCGTA----AAATAAAACTACAGC--TTTAGG--ACAGTATTACCCCTGATAATCTTGCGAGT-----TTTGCATAAAGAATGCTGCA--C-ATGCATGATTTTCTCATGAATTTCAATA-AATTCC--------CA---ACGCT-ACCATT-ATGATT-CTTGTAAA---ATAAC--CAATTAATACAC--ATGT-AACATT--C-T-GGTCAGAGATATACGTCACACAAAGTCAGAGAATTGAAAATGA---GGAGGC-----GG------ATGTATA-CGC-CTAAATT--CATG---GAGATCAGGCTAAATAATG-TATCTTCA-TTTTGATTA-AC--CAT-ATGTT--TTTCCTGG--GTGACTTTCCAACATT--ACT-----------TT-AGATTGGGAAAG-AAAT-GAAAT-TTTCATCATCTGAAACTAA-TATTAGCATATTTTCTT---AT-ATGTTCAGACGTACTG--TCA---------------------TTCTAA--A----------GTAT----TACT---TT---TCAAAT-----TGGAAGAACTCG--TAAG--ACGTA-GAAATTT-----TAATTTCTTTT---GTATTTAT---TATTATACAATAAAAG----ATATGTTTTCAAAGTTCAATACCAAATCAAATG-T-AGCTGTGTTAC-TGTTGC-ACATGCATCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAG---GAATCTCGGTG--ATTAAT-CG--TCCAAGTACTTTAGTTGCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAGGAA-TCCTTGAACAGCAACAAACTTCGAATCCATTTGAATTTCTTGTTTACA-TACATGT--AAACT-TTGAGTTCAAATAATG-AAATAAAAT-AAT---TAGGCTTTGATTCCAGCGATT----GAAAAAAAGGGGG--------------GCTAGATCAT----ATCCAACGAAATCGCTTAAT-AT----------TTA-TC--C-ATCA---ACTATTGAAACA--ACTTAAGACTTTTTATTGAATATTTTTTTGTGGGGTAAATTTCT-ATCTGCCATTGATGTTCAAGAGGAAAAGGGGCAGTGCAT-GGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCT-AAATGGAATG---GCAGCATTCTAGCATGGTTGATAACAAGTTATCATTTATAAACTAA-AAAAT--TGCGAGGAATTCAGAAATT---ATAATTCTGAATGATTAACCGGTGAATTCAGAAGTT--GAAAAAAA------A------------------CAAAGTTTTTCA-CCGGACCTGTCAT--------------T--------------A-TACTGTTCTGCCGTTCACAAA-CTTGCATA-AGTT-GAAATTGAAGAAAAATTCG-TTCCT-------TTACAC-AGCTGCAT-AAGACAAATACAACTAAGGCGAAAGCGTTGG-ATTTCGCGTTTCATCGAAGCAGGGGGGGGGGG---------AGGATGTGAAACTT---AATTTAACAAGTTGATTGCACGTACATGTACGGGTATGTTGTTTTCAAATTCTTCAATGGTGT-TTTTCAGATCACAGG-CACA-TGCACTTTGA---ATTTTATAAAGCATT----AAT----AAATAA----TTTGCCCGT-AAATCAAATATTTGACT-CATTTT--TT--------GTTTA-CGGG-AGA--TTTTTTTTTTA-----T----CAAATGTATT-TCAACTTG-A-C--GT-AAGT-ACCTTTGATCGCAG----TATGT-ACAT
gi|13 : gGGTAA---ATGAGGACAAGTACCATACTGAGGT-A-TATT--T-CTGGTCAGAGATACAAGTTACACAAAGTCAGAGGATG-AAAACAA---AGAGGGGAAAAAG------ATG--TA-CTC-CTAAAAT--CACG---GAAGCCAGACTAAATCATT-TATCGTTA-T---GGT-C-ACCATACAATGATAAT--TCCGA--GTGACTTCCCAAAGTTTCAgtaacataggtgaggacttgat
gi|4 : GG---GGGGGG-----GG------GGGGGTA-CGT-CCTAAAT--CATG---GAGATCAGACTAAATAATT-TATCTTCA-T---GAT-ACAT--TA---TGTT--T--CCTGA--GTGACTTCCCAACATTTC--TCCTGGAAATACTTCGGAT-GAAAAA--AAAT-GAAAGGTTTCACCAACTGAA-CTAAATATAAGCATTTATTTTTCTTAT-ATGTTCAGACGTA--CATTCATCT--GAAGTATATCATTAC-TTTTCA--ATGACAATTGTGTGT----TATTAGTTTATATTATATAAAAAGG-AAGAACTCG--TAAG--ATGTACGAACTTT-----AA--TTCTTTT---GTATTTAT---CA-TATACAATA-AAA----ATACG--TTCAAAGTTCAA-ACCAAATCAAAAG-TCAGCTGTGTTACATGTTGT-ACAtgc
gi|19 : ccggattttcgtaattcttgcttaaatacgagttgtcgttcgtgcgggacggtatcccaagcttttgatgtataacgcatgttaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttattagtactgtacttaaacaactattgtcacacacaaaaaagagagagagagggggggggggggggaatgttcaaaggtatgtacacgatggttaaaaagttgattctcttcaaattaaactgccatacaattacgatgattataatcccttgttacagtgtaggtaaacttcgatctttgaaagttccctggctgcataaggcatgcgtaaaataaggacagtattaccctgataatcttgcgagtgtggatgaaggaaatgctgcagccatgcatggttttctcatgaatttcaaataatttcaatgatactttaatatcttttggtaaactataaggacattaattcacatgtgacatttcttggtcagaaaataatgaagggtgtgtgtgtgggggggggtgggggggTTCCA--ATGACAATTGTGTGT----TATTAGTTTACAAGGAAT---------AGAACCCG--TAAG--CTGTGCGAA----------------TCCT---GTA-TTACATGTA-TATACAATA-AAAT
gi|17 : ccAGAACTTTAG-TGCTGTCCGAAAT-TAT-TTTCTCCAC--CACAG-GAA-GCCTTGTA---C-ACAAACACCGAAGCTTTTTGAATTTCTT-GAA-CA-TA-------AA--C-TTCAAGCCAAATATTG-AAATAa
gi|10 : ttCGAATCCATTTGAAATTCTT-TAA-CA-TA-------AA--C-TTGAGGTCAAATATTG-AAATAAAATAAATAATTAG--TTTGA-TCCAGCTATTTTGAAAAAAAGAGGGGGGGGGGGCAGATTGCGCTAGATCAT----ATCCAACG-AATCGCTAAAA-ATCGCTCAGCTTTTAATC--TTAT-ATCCACTAT-GATCAATTATTT--------TTA-TCAACA-TTTTTCGTG-GGTAAATTTTCAAGCTG-CTATGATGTTC-A-AGAGGAAtgag
gi|4 : GGGGGGGGGTA-----CGTCCTAAATCATGGAGATCAGA--------CTAAATAAT----------TTA-TCTTC-AT-G---A
gi|18 : ccggattttcgtaattcttgcttaaatacgagttgtcgttcgtgcgggacggtatcccaagcttttgatgtataacgcatgttaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttattagtactgtacttaaacaactattgtcacacacaaaaaagagagagagagggggggggggggggaatgttcaaaggtatgtacacgatggttaaaaagttgattctcttcaaattaaactgccatacaattacgatgattataatcccttgttacagtgtaggtaaacttcgatctttgaaagttccctggctgcataaggcatgcgtaaaataaggacagtattaccctgataatcttgcgagtgtggatgaaggaaatgctgcagccatgcatggttttctcatgaatttcaaataatttcaatgatactttaatatcttttggtaaactataaggacattaattcacatgtgacatttcttggtcagaaaataatgaagggtgtgtgtgtgggggggggtgggggggggggggAATGAAATAAGAAA----TGC-AGCAATTCAGAATTTTAAAAAATTAT---CGATCAACTGGTGAACT--GAATTTACG--ACTAATCGGTTA------------------CAAAATTTTTCATC--GA-CTGTCtacattatgtttcctgagtgacttcccaacatttctcctggaaatacttcggatgaaaaaaaatgaaaggtttcaccaactgaactaaatataagcatttatttttcttatatgttcagacgtacattcatctgaagtatatcattacttttcaatgacaattgtgtgttattagtttatattatataaaaaggaagaactcgtaagatgtacgaactttaattcttttgtatttatcatatacaataaaaatacgttcaaagttcaaaccaaatcaaaagtcagctgtgttacatgttgtaca
gi|7 : aaactaaATAAACTAA-AAAAAATCGC-AGGAATTCAGAA-TT---ATAATTATGAACGATTAACCGGTGAATTCATCAGTT--G--AAAGA------ATTAACAACTAATCAGTTACAAAG-TTTTTA-CT-GA-CTGTCAT--------------TCTTTCTGACAAAATATTACTGCTCTGCCGTTCAC-AAACTGTCCTAGAGTTGGAAATTGA--GAAAATACGTT-CCT-------TTACACAAGCTGCCTAAAGACAAATACAGCT-AG----AA-TGT--GGA-TTCGCG-TTCATC-AAGTATAGGGGAAAAACAAAACAAAA--AC--AAAACTGGG-AA-CTAACAAGTTA--TGCACGTAC-----------------------A-TCTTTGAT-GTGCATTTTCAGATCGCA-GTCACAC-GCAA-TTGAC--TTTTTATAAA
gi|9 : ------------------CAAAG-TTTCCATC--GA-TTGCCATCCTTTCTGGCTCAAT--------------ATTACT--TCTGCCATTCAC-AAACTGTCATAGGGTTAGAAATTGG--GGAAATAAGTCCCTTAACTGAGTTACACAAACTGCCTAAAGACAG------CC-AGACGAG--CGTT-G-A-TTCGCT-TACA---AAGTAGGA------------ATAACAAAACG---AACCTGGGAA-CCAACAAGTTA--TGCACGTA--TGTAC----ATG-TG--TTGAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-a
gi|12 : ttA-TCTTTGAT-GTGTATCTTCAGATCGCA-GGCACAC-GCAC-TTGAC--GTTTTA---AGCATT----AATAATAAAAAAA----AATGCCTGT-AAA-CAAATATTTGACTGTTTTTTTGTTTTGTTTTTGTTTA-CGGG-AGGATTTCT------AAAAAAT----CAAATGTATT-TC-A---AAA-CC-GT-AATC-A-CCTTGATCGCAGGGGATATGTAACAT
gi|16 : GCAC-TTGACCCGTTTT-TAAA-TATT----GATAA--AAATCC----TT--CCCAT-AAA-CAAA-ATT-AATT-TATTTTT-TT--------GTTTAACGGG-AGATTTTTTTTTTTTA-----TTTGACAA---TATT-AA-A---AAATC--GTCAAGT-G-CCTaggcgtagcactga
gi|16 : cagGCAC-TTGACG-ATTTTTTAA--TATTGTCAAATAA--AAAAAAAAAATCT-CCCGTTAAA-CAAAAAAATAAAT-TAATTTT-----------GTTTA-TGGGAAGGA------TTTTTA-----T----CAA---TATT-TA-A---AAA-CGGGTCAAGT-G-CCTgtg
gi|20 : cTTTTTTTTA-----T----CAAATGTATTATC-A----AA-CA-GTT-AGTAA-CCTTGATCACAAGGGGTATGC-ctgtg
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|14 ): TGGGGGGGGGGGGGGGGGGGGGCGTACTGCATTGAATTATCTTGTATTCAAACATTAGATATTCCCAGAATGGTCCTCCCACGAAGCTTATACTGATGATAGAATTTCATACAAAAAAACTTGATGGACATATCAACTGAACTATATATTTAAAACTTTT
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 111 11111 5555555555555555555555555555 111 444444444444444444444444444444444444444444444 1111 111 444444444444444 11111 111 222222222222222 1111 1111 2222222 2 1111 333333333 2222222222 222222222 111 33333333333 111 111 11 11 11111 1 111 2222222 1111 11 111 111 222222 11111 11 55555555555555555 22 1 111 2 1 11 222 1 11 1 1 11 666666666 11 111111111 5555555555555 11 11 1 2222222 111 11 2222 111 1 1 1 8888888888888888888888888888888888888888 1 1 1 11 1 1 1 11 2222222 1111 11 1 2222 11 1 66666666666666 1 5555555555 1 1 22222 33 111 11 11111 1111 11 2 1 1 2 333 11 1 1 2222 1 2 2222 11111 7777777777777777777777777 222 00000000000000000000000000000 11 3333333 1 1 11 1 1 7777777777777777777777 222 1 11 7777777777777777777777 2 111 1111 1 3333333 11111 1 22222 1111 2222222222 11 1
lowQualScore : 5 5 77 5 000 5 44444 2 6 5555555555555555555555555555 44 7 2 1 111 1 1 1 1 444444444444444444444444444444444444444444444 1 1 666 0 222 6 7 99 1111 111 99 111111111111111 99 6 66666 000 6 4 333333333333333 6 0000 66 0 5 5 4444 5 5 8 222 5 5 6666666 5 1 0 99 6 4444 6 3 222222222 99 6 888 6666666666 66 1 99 666666666 222 0 3 00000000000 1 8 0 0 111 000 0 11 0 6 8 11 33333 0 2 3 0 2 444 1111111 8 9999 8 8 55 11 8 8 0 99 8 444 111 111111 66666 11 0 00000000000000000 33 0 2 111 0 2 0 3 2 33 777 0 2 22 0 0 2 33 555555555 0 11 5 999999999 1 4444444444444 11 11 0 8888888 8 444 8 11 8 8 5555 777 0 0 2 2 3 3 3 3 0 22 0000000000000000000000000000000000000000 4 0 0 0 0 33 2 0 0 2 0 0 0 11 1 8 2222222 2222 77 8 1 11 0 1111 33 3 0 3 0 0 44444444444444 6 3 8888888888 3 3 77777 7 333 00 6 7 555 99 6 6 77777 5555 6 6 88 0 5 5 0 555 88 5 5 1 3 9999 0 0 1111 3 2 2 77777 8888888888888888888888888 0 0 666 8 88888888888888888888888888888 3 66 3 3 2 6 33 4 6 6 2222222 3 2 3 3 3 0 6 9 0 3 33 0 3 0 99 0 8888888888888888888888 000 0 33 6666666666666666666666 8 8 0 8 0 8 8 222 11 2 4444 11 3 0 3 3 2222222 3 88888 0 9 00000 7777 0 8 7777777777 44 8 8 6 0
lowQualScore : . . .. . ... . ..... . . ............................ .. . . . ... . . . . ............................................. . . ... . ... . . .. .... ... .. ............... .. . ..... ... . . ............... . .... .. . . . .... . . . ... . . ....... . . . .. . .... . . ......... .. . ... .......... .. . .. ......... ... . . ........... . . . . ... ... . .. . . . .. ..... . . . . . ... ....... . .... . . .. .. . . . .. . ... ... ...... ..... .. . ................. .. . . ... . . . . . .. ... . . .. . . . .. ......... . .. . ......... . ............. .. .. . ....... . ... . .. . . .... ... . . . . . . . . . .. ........................................ . . . . . .. . . . . . . . .. . . ....... .... .. . . .. . .... .. . . . . . .............. . . .......... . . ..... . ... .. . . ... .. . . ..... .... . . .. . . . . ... .. . . . . .... . . .... . . . ..... ......................... . . ... . ............................. . .. . . . . .. . . . ....... . . . . . . . . . . .. . . . .. . ...................... ... . .. ...................... . . . . . . . ... .. . .... .. . . . . ....... . ..... . . ..... .... . . .......... .. . . . .
lowQualScore : 7 7 99 7 000 7 33333 5 7 5555555555555555555555555555 77 5 5 0 777 0 0 0 0 000000000000000000000000000000000000000000000 0 0 222 8 222 7 5 22 2222 777 22 777777777777777 22 7 77777 888 7 0 777777777777777 7 8888 33 7 7 7 6666 7 7 7 666 7 7 6666666 0 0 5 22 7 2222 7 2 777777777 22 7 777 0000000000 88 7 22 777777777 222 8 2 66666666666 0 0 8 8 777 666 8 00 8 0 0 22 00000 8 5 2 0 0 000 2222222 0 6666 0 0 44 00 0 0 6 00 0 000 888 888888 00000 00 8 11111111111111111 22 0 5 000 0 5 0 2 5 88 222 0 5 55 0 0 0 88 555555555 8 00 0 666666666 4 2222222222222 00 00 4 6666666 0 000 0 88 0 0 0000 000 0 0 5 0 2 2 2 2 0 00 3333333333333333333333333333333333333333 0 0 2 0 0 88 5 0 0 5 0 8 8 00 0 0 8888888 2222 00 0 0 00 0 2222 88 2 0 2 2 7 33333333333333 0 3 3333333333 3 3 77777 3 000 77 7 3 777 33 7 7 00000 3333 7 0 00 0 5 5 0 000 00 5 5 0 2 5555 0 0 2222 0 5 5 55555 8888888888888888888888888 8 8 888 0 55555555555555555555555555555 2 88 2 0 5 5 88 0 5 5 5555555 2 5 2 2 2 0 5 2 0 2 88 0 2 0 00 2 0000000000000000000000 555 0 88 0000000000000000000000 0 0 8 0 0 0 0 444 66 5 0000 88 2 0 2 2 5555555 2 55555 0 8 00000 0000 8 0 8888888888 00 0 0 5 0
consensus : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGAT-GTA-T---AATAAA--TGGGGACGT------ATGCGTTAAANACAACGGATGGCAACGAT---TAGCCNANTNACTGCGTACTTCGGTTTAAAGTGCT-ACCCGNATAGAC-A--TTTTNNACCGATTAATCAGGTTATTAGTACGGTACTT-AAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TT-CANAGG-------TATAT---GTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGAT-GATTATAATCCCTTGTTACAGTGCA-GGTAAAATTCGATCTT-TGAAAGTTCCCTGGCAGTTGT-AGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-----T--G-ATAAGAAATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATATAATTCCCA-AC--------GAT-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATTT--C-TGGTCAGAGATATANGTCACACAAAGTCAGAGAAT-GAAAATGAG---GAGGG-G-----GAT-G---TATAC-GC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGG-AAATACTTCAGAT-GGGAAAGAAA-T-GAAATGTTTCATCAACTGAA-CTAAATATTAGCAT--ATTTTTTTN--ATA-TGTTCAGACGTAC-GT-CAT-CTAAA--GTAT-ATGAC---TTTTCAAT--GACAATTGCGTGT----TATTAGTTTACATTAAAT-----GTGAAGAACTCG--TAAG--ACGTACGAANTTT-A-----ATT-CTTTTGTA---TT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGCA-CATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGGTGG--TTAAT-CG---CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA-TACATGT--AA--C-TTGAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAA--ACTTAAGACTTTTTATTGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---TGC-AGGAATTCAGAAATT----ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCCGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTAC-G--ATG-TGTTN--AAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACT-------CATTTT---T-TTGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AA-CGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
Reference ( family-1930 ) : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGAT-GTA-T---AATAAA--TGGGGACGT------ATGCGTTAAANACAACGGATGNCAACGAT---TAGCCNANTNANTNCGNNNTTNGNTTTAANNNCCT-NCNNGNANANAC-G--TNNTNNANCNATTANCCAGGTTATTAGTACGGTACTT-AAACAAATATTGNCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TT-CATAGG-------TATAT---GTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGAT-GATTATAATCCCTTGTTACAGTGCA-GGTAAAATTCGATCTT-TGAAAGTTCCCTGGCAGTTGT-AGGCTG-TATAANGCAAT--G-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-----T--G-ATAAGAAATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATATAATTCCCA-AC--------GNT-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATTT--C-TGGTCAGAGATATACGTCACACAAAGTCAGAGAAT-GAAAACGAG---GAGGG-G-----GAT-G---TATAC-GC-CTNAAAT--CATG-GAGAT-CAGGCTAAATAATN-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCTGG--GTGACTTCCCAACGTTTCA-TCCGG-A--TACTT-AGAT-GGGAAAGAAA-T-GAAAT-TTTCATCAACTGAA-CTAAATATTAGCAT--ATTTTTTTT--ATA-TGTTCAGACGTAC-GT-CAT-CTGAA--GTAT-ATG-----TTTTCAAT--GACAATTGCGTGT----TATTAGTTTACATNAAAT-----GTGAAGAACTCG--TAAG--ACGTACGAAATTT-A-----ATT-CTTTTGTA---TT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCCGTGTTACATGTTGCA-CATGCNNCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCA-------ATAAGAGCGAGCCTCGGTGGAGTTAATGCGATCCCAAGAACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TNACA-TACATGT--AA--C-TTGAGNTCAAA-TANTGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAGAGGGGGGGGG-G------CGCGCTAGATCATATCCGACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGANNNATTACTTAAGACTTTTTATTNAACATTTTTTCGTGGGGTAAATTTCCAANCTGCCNNTGATGTTCAAGAGGGGAAGGGGCAGTGCAT-GGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCT-AAATGGAATG---GCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---CGC-AGGAATTCAG-AATT----ATAATTATGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCCGA-CTGTCAT--------------T--------------ATTACTGCTCTGCCGTTCACAAACTGTCATAGAGTTGGAAATTGA--GAAAATACGTTCCCT-------TTACACAAGCTGCCTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGTAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTTGGAA-CTAACAAGTTA--TGCACGTAC-TGTAC----ATG-TGTT---AAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAANAATTTGCCCGTAAA-CAAATATTTGACT-------TATTTT---T-TTGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AA-CGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
gi|1 : ATTCCGGATTTTCGTAACT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGAACG-----TATCCCAAGCTTTTGAT-GTA-T---AATAAAA-TGGGAACAT------ATGCATTAAANNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN-N--NNNNNNNNNNNNNNNNNAGGTTATTAGTACAGTACTT-AAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TT-CATAGG-------TA-AT---ATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAATTACGAT-GATTAAATTCCCTTGTTACAATGCA-GGTAAAATTCAATCTT-TGAAAGTTCCCTGGCAGTTGT-AAGCTA-TATAAGGCG-T--G-CTTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-----T--G-ATAAGAAATGCTGTA--C---AT----GCATGGTTTTCTCATGAATTTCAATATAATTTCCA-AT--------GAT-ACCATTATGATCTTTGGTAA---ATAAGGACAACTA--ATAAACATGT-A-CATTT--T-TGGTCAGAGATACAAGTCACACAAAGTCAGAGAAA-TAAAATGAG---GAGGG-A-----GAT-G---TATAC-GC-CAAAAAT--CATT-GATAT-CAGACTAAATCATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCACTCCAA-AAATACTT-AGAT-GGGAAAGAAA-T-GAAATGTTTCATCAACTGAA-CTAAATATTAGCAT--ATTTTTTTCTGGTA-TGTTCAGACGTA--GT-CAT-CTAAA--GTAT--TGA----TTTTCAAT--GACAATTGTGTAT----TATTAGTTTATATTAAAT------TGAAGAACTCG--TAAG--ATGTACGAACTTT-C-----ATT-CTTTTGTA---TT-TAC-TAT-ATACAATACAAATTTTATACGTT--CGAAGTTCAA-ACCAAATCCAATG-TCAGCTGTGTTACATGTTGCA-CATGCTTCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---ATAAG---GAATCTCGAT-----TAAT-CG---TCAAGTACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTTCA-TACATGT--AA--C-TTGAGTTCAAA-TAATGAAA--TAAAATAAA----TTAG--TTTGAT-CCAGCGATTTTGAAAAAAAAAGGGGGGGGGTG------TGTGCTAGATCATATCAAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAA--ACTTAAGAC---TTA-TGAACATTTTTT-GT--GGTAAATTTTT-ATCTG-CATTGATGTTCAA-AGAAGAAGGGG--ATGCATGGGGTTTCC-AATCCCCAGTG-CGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGC--CATTCTAGCATGG-TGATAACAAGTTATCA-TAATAAACT-AAAAA---TGC-AGGAATTCAGAAATT----ATAATTCTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAG-TTTTCA--CGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCAC-AACTGTCCTAGAGTTGGAAATTGA--GAAAATTCGTTTCCT-------TTACACAAGCTGCATAAAGACAAAT-CAACT-AGGCGAAA-CG-TGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----GGAGAGAGAAGAATG-GAAAACTT--AA-TTAACAAGTTA--TGCACGTACATGTACCGT-ATG-TGTTC--AAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACACTGCAC-TTGAC--ATTTTATAAAGCATTAATAA--AAATGATTTGCCCGTAAA-CAAATATTTGACT-------CATTTT---TGTTGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCACTTG---AA-CGTCAAGT-ACT-TTGATCGCAGGGGATATGT-ACAT
gi|10 : CGAATCCATTTGAAATTCTT--TAACA-TA-------AA--C-TTGAGGTCAAA-TATTGAAA--TAAAAT-AAATAATTAG--TTTGAT-CCAGCTATTTTGAAAAAAAGAGGGGGGGGG-GGCAGATTGCGCTAGATCATATCCAACGAA-TCGCTAAAAATCGCTCAGCTTTTAATCTTAT-ATCCACTAT-GATCAATTA--------TTTTTAT-CAACATTTTT-CGTGGG-TAAATTTTCAAGCTGC-TATGATGTTCAAGAGG
gi|11 : TGACGGCTTT-TAAATTAA-ACAGG-C-ATGCAATTAAGAT-AATTATAATCTATT-TTATAG------GTAAAATTCGATCTT-TGAAAGTTCCCAGTCTGTT------TTC-TATAATAC-AT--G-CGTA----AAATAAA-TT-C--C--T---GG--GCAGTACTTCTT-TAATAAT-------------------ATA--GAGTGCTGCA--CGCGATGCAAGCATAATTTTTATATGAATTCCAAT-TA--TCAGATAT--------GATAACCAGTA--ATGC-TGGTGA---ATAAaa
gi|12 : A-TCTTTGAT-GTGTATCTTCAGATCGCA-GGCACAC-GCAC-TTGAC--GTTTTA---AGCATTAATAATAAAAAAAAATGCCTGTAAA-CAAATATTTGACTGTTTTTTTGTTTTGTTT-TTGTTT-ACGGGAGGATTTCTAAAAA------AT----CAAATGTATT-TCA---A---AACCGT-AATC-ACC-TTGATCGCAGGGGATATGTAACAT
gi|13 : GGTAA---ATGAGGACAAGTACCATACTGAGGT-A-TATTT--C-TGGTCAGAGATACAAGTTACACAAAGTCAGAGGAT-GAAAACAAA---GAGGG-GAAAAAGAT-G-----TAC-TC-CTAAAAT--CACG-GAAGC-CAGACTAAATCATT-TATCGTTA-T---GGT-C-ACCATACAATGATAAT--TCCGA--GTGACTTCCCAAAGTTTCA-Taggcgtagcactga
gi|15 : TT-CTTGC-TTA--T-ACAGGTTGTCGTTC---GTG-ACGGACGG-----TA-----------TGATAATA-T---GA-AGG--TGGGGACGCATATAAATGGGTTAAACATAACGGATGGCAACGAT---gc
gi|16 : CAG-GCAC-TTGACCCGTTTT-TAAA-TATTGATAA--AAATCCTT--CCCATAAA-CAAA-ATT-AATT-------TATTTT---T-TTGTTTAACGGGAGATTTTTT-----TTTTTTATTTGACAA---TATT-AAA---A---AATCGTCAAGT-GCC-Tatgactactacccagtgctcggttaaaatctaaccggttcggttagccaggctcttag
gi|17 : AGAACTTTAGT-GCTGTCCGAAAT-TAT-TTTCTCCAC--CACAGG-AA-GCCTTGTA---CA-CAAACACCGAAGCTTTTTGAATTTCTT--GAACA-TA-------AA--C-TTCAAGCCAAA-TATTGAAA--TAgtg
gi|18 : ttATGAAATAAGAAA---TGC-AGCAATTCAG-AATTTTAAAAAATTAT---CGATCAACTGGTGAACT--GAATTTACG--ACTAATCGGTTA------------------CAAAATTTTTCAT-CGA-CTGTCtgag
gi|19 : aaactaaaTTCCAAT--GACAATTGTGTGT----TATTAGTTTACAAGGAAT---------AGAACCCG--TAAG--CTGTGCGAA----------------TCCTGTA---TTACATGTAT-ATACAATA-AAA----
gi|2 : ccGGCTG-TATAAAGGGATTGG-CGTA----AAATAAAACTACAGC--TTTAGG--ACAGTATTACCCCTGATAATCTTGCGAGT-----TTTGCATAAAGAATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATA-AATTCCCA-AC--------GCT-ACCATTATGATTCTTGTAAA---ATAAC--CAATTA--ATACACATGT-AACATT---C-TGGTCAGAGATATACGTCACACAAAGTCAGAGAATTGAAAATGAG---GAGGC-G-----GAT-G---TATAC-GC-CTAAATT--CATG-GAGAT-CAGGCTAAATAATG-TATCTTCA-TTTTGATTA-AC--CAT-ATGTT--TTTCCTGG--GTGACTTTCCAACATT--------------ACTTTAGATTGGGAAAGAAA-T-GAAAT-TTTCATCATCTGAAACTAA-TATTAGCAT--ATTTTCTT---ATA-TGTTCAGACGTACTGT-CATTCTAAA--GTATTAC------TTTTCA-------AATTG----------------------------------GAAGAACTCG--TAAG--ACGTA-GAAATTTTA-----ATTTCTTTTGTA---TT-TAT-TATTATACAATA-AAAG---ATATGTTTTCAAAGTTCAATACCAAATCAAATG-T-AGCTGTGTTAC-TGTTGCA-CATGCATCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAG---GAATCTCGGTGA--TTAAT-CG--TCCAAGTACTTTAGTTGCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAGGAA-TCCTTGAACAGCAACAAACTTCGAATCCATTTGAATTTCTTGTTTACA-TACATGT--AAACT-TTGAGTTCAAA-TAATGAAA--TAAAAT-AA----TTAGGCTTTGATTCCAGCGATT----GAAAAAAAGGGGGG---------------CTAGATCATATCCAACGAAATCGCTTAATAT----------TTA-TCC-ATCA---ACTATTGAAACA--ACTTAAGACTTTTTATTGAATATTTTTTTGTGGGGTAAATTTCTA-TCTGCCATTGATGTTCAAGAGGAAAAGGGGCAGTGCAT-GGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCT-AAATGGAATG---GCAGCATTCTAGCATGGTTGATAACAAGTTATCATTTATAAACTAAAAAAT--TGCGAGGAATTCAGAAATT----ATAATTCTGAATGATTAACCGGTGAATTCAGAAGTT--GAAAAAAA------A------------------CAAAGTTTTTCACCGGACCTGTCAT--------------T--------------A-TACTGTTCTGCCGTTCACAAACTTGCATA-AGTT-GAAATTGAAGAAAAATTCGTT-CCT-------TTACAC-AGCTGCAT-AAGACAAATACAACTAAGGCGAAAGCGTTGGATTTCGCGTTTCATCGAAGCAGGGGGGGGGGG-------------AGGATGTG-AAACTT--AATTTAACAAGTTGATTGCACGTACATGTACGGGTATGTTGTTTTCAAATTCTTCAATGGTGT-TTTTCAGATCACAGG-CACAT-GCACTTTGA---ATTTTATAAAGCATTAAT----AAATAATTTGCCCGTAAATCAAATATTTGACT-------CA-TTT---T-TTGTTT-ACGGGAGA--TTTT-----TTTTTTAT----CAAATGTATT-TCA---ACTTGA-CGT-AAGT-ACCTTTGATCGCA----GTATGT-ACATta
gi|20 : TT-----TTTTTTAT----CAAATGTATTATCA---A---AC-AGTT-AGTAACC-TTGATCACAAGGGGTATGC-gtaacataggtgaggacttgat
gi|21 : TCGTAATTTCTTGC-ATG--T-ACGAAATGTCGTTCCGAGTG-CGGGACAG-----TATC
gi|3 : ATTCCGGATTTGCGTTATT-CTTGCGTTA--T-ACGAGTTG-CGTTC---GTG-CGGGACGGCTTGATATCCCAAGCTTT-GAT-GTA-TTGTCATAA----GGGGACGTT-----ATGCATTAAA-ACA-CGGATGGATACGATCATTAGTCCGATTACTGAGTACT-CGGTTTAAAGTGCT-AACCGGATAGAC-A--AGTTGTAACCATTATC-AGCTTATTAGT-CG-TACCTCAAACAAATATTG-CACA--C--G-AA---AATTAGGAA---------------G--GAGGCAGA-----GTA--TTTCATAGG-------TATATCATGTACA-CGATA--T-ATCAA--GTGGGT-CTCTTGCAAATTAATAC----C-ATGCATTTACGATTGAT-A-AATTCCT-GTTACAATGCAAGGTAAAATTCGATCTTATGAAAGTCCCTAGGC-GCTGTTAGGCTGATATAAAGCAAT--GACG-A----AAATAAA-CTACAGCAAT--AGGGCACAGTATTACCC-TCATACTCT-GCGAGT-----A--G-ATAAGAA-TGC-GCA--CT--AG----GCAGGATTTTCTCATGAATTTCAAT-TAATTCCCA-GCCAAGCAAGGTT-ACCATTATGAATCTTGGTAA----TAC---CAATTA--A-AC-CATGT-A--ATTTATC-TG---AGCGATATACGTCACACAA--TCAGAGAAT-GAAAATAAGAGGGAGGGAG-----GATCGAATTATACCGCGCACAAATTGCATGAGAGATACAGGCTAAATAATGATATCTTCGCT---GAT-A-AC----C-ATGTT--C--CTTGGCAGTGACT-----A------A-TCCAGCA--TACT--AGCT-GGGAAAGAAAATAGAAAT-TTTCAT--ACTGAA-CTAAAAATTAG-----ATTATTTTA--ATAATATTCAGAC-TAC-GT-CAT-CTAAAAAGTAT-ATGAC---TTTTCAATATGG-AACTTCATCTAAGATATTACTTTGCA--AAAT-----GTAACGATATCGATTAAGGAACAGACGGAATTT-ATTTAAATT-CTTTTGTAGTATT-TAT--AT-ATACCATA-AAA----ATATGT----AAAGTTTCA-ACCAAATCAAATGATCAGCCG-G--ACATG--GCAACATGTCATCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCA-------ATAAGAGCAAGCCTC---GGAGTTAATGCGAT-CCAAGAACTTTAGT-GCGGTCTGAACCATATATTTCTCCACGACG-AAG-AAGTAATTGAACAGCA-CAAACTTCG-ATCCA-TGGAATTTCTT--TTACATTACATGTTAAA--CATTGA--TTAAATTAATGAAAATTAAATT-AA----TTAG--TT---T-CCAGCGATTTTAAGAAAAA
gi|4 : CCGGATTTTCGTAATT-CTTGC-TTAAAT-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGAT-GTA-T---AA------------CGC------ATG--TTAAATNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNN-N--NNNNNNNNNNNNNNNNNAGGTTATTAGTACTGTACTT-AAACAACTATTGTCACA--C--ACAA---AA--AAGAGAGAGAGAGGGGGGGGG--GGGG-GGA-----ATG--TT-CAAAGG-------TAT-----GTACA-CGATG--G-TTAAAAAGTTGATTCTCTT-CAAATTAA-AC-TG-CCATACAATTACGAT-GATTATAATCCCTTGTTACAGTGTA-GGTAAACTTCGATCTT-TGAAAGTTCCCT-----------GGCTG-CATAAGGC-AT--G-CGTA----AAATA---------------AGG--ACAGTATTACCC-TGATAATCTTGCGAGTGTGGAT--G-A-AGGAAATGCTGCAGCC---AT----GCATGGTTTTCTCATGAATTTCAA-ATAATT-TCA-AT--------GAT-ACTTTAATATCTTTTGGTAAACTATAAGGAC-ATTA--ATTCACATGTGA-CATTT--CTTGGTCAGAAA-ATA
gi|4 : GGG---GGGGG-G-----GGG-G---GGTAC-GT-CCTAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-ACAT--TA---TGTT--T--CCTGA--GTGACTTCCCAACATTTCT-CCTGG-AAATACTTCGGAT-GAAAAA-AAA-T-GAAAGGTTTCACCAACTGAA-CTAAATATAAGCATTTATTTTTCTT--ATA-TGTTCAGACGTAC-ATTCAT-CTGAA--GTAT-ATCATTACTTTTCAAT--GACAATTGTGTGT----TATTAGTTTATATTATATAAAAAG-GAAGAACTCG--TAAG--ATGTACGAACTTT-A-----ATT-CTTTTGTA---TT-TAT-CAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAAAG-TCAGCTGTGTTACATGTTGTA-CAatgaagggtgtgtgtgtgggggggggtggggggggggggggggggggggtacgtcctaaatcatggagatcagactaaataatttatcttcatgatacattatgtttcctgagtgacttcccaacatttctcctggaaatacttcggatgaaaaaaaatgaaaggtttcaccaactgaactaaatataagcatttatttttcttatatgttcagacgtacattcatctgaagtatatcattacttttcaatgacaattgtgtgttattagtttatattatataaaaaggaagaactcgtaagatgtacgaactttaattcttttgtatttatcatatacaataaaaatacgttcaaagttcaaaccaaatcaaaagtcagctgtgttacatgttgtaca
gi|5 : ccggattttcgtaattcttgcttaaatacgagttgtcgttcgtgcgggacggtatcccaagcttttgatgtataacgcatgttaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggttattagtactgtacttaaacaactattgtcacacacaaaaaagagagagagagggggggggggggggaatgttcaaaggtatgtacacgatggttaaaaagttgattctcttcaaattaaactgccatacaattacgatgattataatcccttgttacagtgtaggtaaacttcgatctttgaaagttccctggctgcataaggcatgcgtaaaataaggacagtattaccctgataatcttgcgagtgtggatgaaggaaatgctgcagccatgcatggttttctcatgaatttcaaataatttcaatgatactttaatatcttttggtaaactataaggacattaattcacatgtgacatttcttggtcagaaaataatgaagggtgtgtgtgtgggggggggtgggggggGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTGGCGGGACGG-----TATCC-AGGCTTTTGAT-GTAAT---AATAAAGATGGGAACAT------ATGCATTAAAAACAACGGATGGCAACGAT---TAGCCGATTAACTGTGTACT-CGGTTTAAAGTGCA-ACCGG-ATAGAC-AATTTGTACACCGATTAATCAGGTTATTAGTACAGTACTT-AAACAAA-ATTGGCACA--C--G-AA---AA-----AG---------------G--GGGG-GTA-----ATAATTT-CATAGGTAATGTATATAT---ATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAA-TACG-T-GATTA-AATTCCTTGTTACATCGCA-GGTAAAATTCGATCTT-TGAAAGTTCCCTGGCA-TTGT-AGGCTG-T
gi|6 : TTCCGGAGTTTCGTAATT-TTTGC-TTA--TTACGATTTGTCGTTC---GTG-CAGGACGG-----TATCCCAAGCTTTTGTT-GTA-----AAT------------GT------GTGCGTTGAATACAACGGATGACAACGAT---TAGCCTACTGAGTAC-----TCGGTTTAAAGTGCTAACCTGC-TAGACAA--TTTGTAACCGATTAATCAGGTTATTAGTATGG-------------TATTGGCACACCC--A-AA---AA--AAGAG---------------GAAAGGG-GGAGGGGTATA--TT-CAAAAG-------TATGT---ATAAA-CGATG--T-ATAAACAGTTCGTGCTTTT-CAAATTAA-AC-TGCC-ATGCAATTACGAT-GATTATAATCCCTTGTTACAGTGCA-GGTAAAATTCGATCTT-TGAAAGTTCCTTGGCAGTTAT-AGGCTG-TATAAAGg
gi|7 : ATAAACTAAAAAAAATCGC-AGGAATTCAG-AATT----ATAATTATGAACGATTAACCGGTGAATTCATCAGTT--G--AAAGA------ATTAACAACTAATCAGTTACAAAGTTTTT-A-CTGA-CTGTCAT--------------TCTTTCTGACAAAATATTACTGCTCTGCCGTTCACAAACTGTCCTAGAGTTGGAAATTGA--GAAAATACGTTCC-T-------TTACACAAGCTGCCTAAAGACAAATACAGCT-AG----AA-TGTGGA--TTCGCG-TTCATC-AAGTATAGGGGAAAAACAAAACA-----AAA-ACA---AAACTGGGAA-CTAACAAGTTA--TGCACGTAC-----------------------A-TCTTTGAT-GTGCATTTTCAGATCGCA-GTCACAC-GCAA-TTGAC--TTTTTATAAA
gi|8 : -AAACAAATTCTGTCATA--CATG-AACAGAA--AAGGG---------------G--AGGG-GGA-----GT------CAAAAA--------ATTT---GTTAATCAATGACTGATCAGA-TTTGATGATCTT-CAAAGTAA-CT-TC-C-ATACAATTGCGAT-AATTAT-ACCTCATGTT----T-CA-AATAAAAC----TCTG-TAAAAATT-CCTGGT-----C-AGGCTT-TATAATGC-AT--A-TGTAAATTAAATAAA-CTAC--C------GG--GCAGTATTACAC-AGATAA----GAGTGT-----T--G-ATAA-CAATTCTACA--C----T----GCAa
gi|9 : ------------------CAAAGTTTC-CATC-GA-TTGCCATCCTTTCTGGCTCAAT--------------ATTACT--TCTGCCATTCACAAACTGTCATAGGGTTAGAAATTGG--GGAAATAAGTCCCTTAACTGAGTTACACAAACTGCCTAAAG------ACAGCC-AGACG-AG-CGTTGA--TTCGCT-TACA---AAGTA-----GGAATA----ACA-----AA--AC--G-AACCTGGGAA-CCAACAAGTTA--TGCACGTA--TGTAC----ATG-TGTTG--AAA-TCTTCGAT-GTGTATTTTCAGATCGCA-aaca
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TGGGGGGGGGGGGGGGGGGGGGCGTACTGCATTGAATTATCTTGTATTCAAACATTAGATATTCCCAGAATGGTCCTCCCACGAAGCTTATACTGATGATAGAATTTCATACAAAAAAACTTGATGGACATATCAACTGAACTATATATTTAAAACTTTT
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 111 11111 5555555555555555555555555555 111 111111 22 1 22222222222 1 1111 111 444444444444444 2222222222 22222222222222 1111 1111 222222 1 1111 333333333 2222222222 111 222222222 111 22222222 111 11 11 11111 2222222 111 444444444444444 1111 11 111 111 222222 11111 11 22222222222 11 11 1 1 1 1 11 1111 1 1111 1 11 3333 111 111111111 5555555555555 11 11 222222 111 11 2222 111 1 1 1 5555555 222 222 1 33 1 1 1 11 1 1 1 11 2222222 1111 11 1 2222 11 1 55555555555555 1 5555555555 1 1 22222 11111 111 11 11 11 1 1 1 1 222 11 1 1 22222 1 111 11111 7777777777777777777777777 222 00000000000000000000000000000 11 3333333 1 1 11 1 1 7777777777777777777777 111 1 11 55555555555 2 111 1111 1 444444444444 1 22222 1111 2222222222 11 1
lowQualScore : 5 5 77 5 000 5 44444 2 6 5555555555555555555555555555 44 7 2 111 0 1 1 555555 11 2 2 2 0 77 77777777777 2 0 1 0 8 99 1111 111 99 111111111111111 99 6 1111111111 1 88888888888888 6 0000 0 5 5 4444 5 5 8 1 222 5 5 666666 5 1 7 99 6 4444 6 3 222222222 99 6 99 6666666666 555 99 666666666 222 0 3 8 99999999 8 0 0 1 111 55 0 11 0 6 8 11 33333 0 8 3333333 99 444 222222222222222 8 9999 8 8 22 11 8 8 0 88 8 444 111 666666 66666 11 0 0 66666666666 66 22 0 0 5 2 0 3 2 33 5555 0 2 6666 0 33 3333 8 111 5 999999999 1 3333333333333 11 11 8 000000 8 444 8 11 8 8 5555 777 0 0 2 3 3 3 3 0 1 4444444 333 000 0 3 11 1 0 0 0 0 33 2 0 0 2 0 0 0 11 1 8 2222222 2222 77 8 1 11 0 1111 33 3 0 3 0 44444444444444 3 8888888888 3 3 77777 7 7 00000 000 99 6 6 44 6 7 6 88 5 5 5 5 111 88 5 5 1 3 22222 0 9 777 1 2 2 77777 8888888888888888888888888 0 0 666 8 88888888888888888888888888888 3 33 3 1 2 6 33 1 6 6 2222222 3 1 3 3 3 0 6 9 0 3 33 0 3 0 99 0 8888888888888888888888 888 0 33 3 2 44444444444 2 4 8 8 0 8 0 8 8 222 11 2 4444 0 3 0 3 3 0 3 444444444444 0 9 00000 7777 0 8 7777777777 44 8 8 6 0
lowQualScore : . . .. . ... . ..... . . ............................ .. . . ... . . . ...... .. . . . . .. ........... . . . . . .. .... ... .. ............... .. . .......... . .............. . .... . . . .... . . . . ... . . ...... . . . .. . .... . . ......... .. . .. .......... ... .. ......... ... . . . ........ . . . . ... .. . .. . . . .. ..... . . ....... .. ... ............... . .... . . .. .. . . . .. . ... ... ...... ..... .. . . ........... .. .. . . . . . . . .. .... . . .... . .. .... . ... . ......... . ............. .. .. . ...... . ... . .. . . .... ... . . . . . . . . . ....... ... ... . . .. . . . . . .. . . . . . . . .. . . ....... .... .. . . .. . .... .. . . . . .............. . .......... . . ..... . . ..... ... .. . . .. . . . .. . . . . ... .. . . . . ..... . . ... . . . ..... ......................... . . ... . ............................. . .. . . . . .. . . . ....... . . . . . . . . . . .. . . . .. . ...................... ... . .. . . ........... . . . . . . . . . ... .. . .... . . . . . . . ............ . . ..... .... . . .......... .. . . . .
lowQualScore : 7 7 99 7 000 7 33333 5 7 5555555555555555555555555555 77 5 5 777 5 0 0 555555 33 5 0 5 3 55 22222222222 5 8 4 8 0 22 2222 777 22 777777777777777 22 7 2222222222 0 77777777777777 7 8888 7 7 7 6666 7 7 7 7 666 7 7 666666 0 0 7 22 7 2222 7 2 777777777 22 7 77 0000000000 000 22 777777777 222 8 2 0 00000000 0 8 8 7 777 66 8 00 8 0 0 22 00000 8 8 8888888 00 000 222222222222222 0 6666 0 0 00 00 0 0 6 66 0 000 888 666666 00000 00 8 8 77777777777 00 55 0 0 0 5 0 2 5 88 5555 0 5 5555 0 88 0000 8 888 0 666666666 4 0000000000000 00 00 8 666666 0 000 0 88 0 0 0000 000 0 0 5 2 2 2 2 0 0 3333333 333 333 7 3 77 0 0 2 0 0 88 5 0 0 5 0 8 8 00 4 0 8888888 2222 00 0 4 00 0 2222 88 2 0 2 2 33333333333333 3 3333333333 3 3 77777 3 3 33333 000 33 7 7 77 7 3 7 00 0 5 5 0 000 00 5 5 0 2 22222 0 8 555 0 5 5 55555 8888888888888888888888888 8 8 888 0 55555555555555555555555555555 2 22 2 0 5 5 88 0 5 5 5555555 2 0 2 2 2 0 5 2 0 2 88 0 2 0 00 2 0000000000000000000000 555 0 88 2 5 55555555555 5 5 0 0 8 0 0 0 0 444 66 5 0000 8 2 0 2 2 2 2 888888888888 0 8 00000 0000 8 0 8888888888 00 0 0 5 0
consensus : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGAT-GTA-T---AATAAA--TGGGGACGT------ATGCGTTAAANACAACGGATGGCAACGAT---TAGCCTACTNACCGAGTAC-TCGGTTTAAAGTGCTAACCGGATAGAC-ATTT-TNNACCGATTAATCAGGTTATTAGTACGGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCANAGG-------TAT---ATGTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCAGTTG-TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-----T--G-ATAAGGAATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATATAATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATT--TC-TGGTCAGAGATATANGTCACACAAA------GTCAGAGAAT-GAAAATGA---GGAGG-------G-G-----GAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTT--TNAT-ATGTTCAGACGTAC-G-TCAT-CT--AAAGTAT---ATGACTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACATT-----AAATGTGAAGAACTCG--TAAG--ACGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGG-GATTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA-TACATGT--AA--C-TTGAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATCGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCCGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AA-CGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
Reference ( family-1930 ) : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGAT-GTA-T---AATAAA--TGGGGACGT------ATGCGTTAAANACAACGGATGGCAACGAT---TAGCCNANTNACTGCGTACTTCGGTTTAAAGTGCTACCCGNATAGAC-ATTT-TNNACCGATTAATCAGGTTATTAGTACGGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCANAGG-------TAT---ATGTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCAGTTG-TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-----T--G-ATAAGAAATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATATAATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATT--TC-TGGTCAGAGATATANGTCACACAAA------GTCAGAGAAT-GAAAATGA---GGAGG-------G-G-----GAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTT--TNAT-ATGTTCAGACGTAC-G-TCAT-CT--AAAGTAT---ATGACTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACATT-----AAATGTGAAGAACTCG--TAAG--ACGTACGAANTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGGTGGTTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA-TACATGT--AA--C-TTGAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATTGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCCGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTNAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AA-CGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
gi|1 : ATTCCGGATTTTCGTAACT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGAACG-----TATCCCAAGCTTTTGAT-GTA-T---AATAAAA-TGGGAACAT------ATGCATTAAANNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN-NNNNNNNNNNNNNNAGGTTATTAGTACAGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCATAGG-------TA----ATATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAATTACGA-TGATTAAATTCCCTTGTTACAATGC-AGGTAAAATTCAATCTT-TGAAAGTTCCCTGGCAGTTG-TAAGCTA-TATAAGGCG-T--G-CTTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-----T--G-ATAAGAAATGCTGTA--C---AT----GCATGGTTTTCTCATGAATTTCAATATAATTTCCA-ATGA--------T-ACCATTATGATCTTTGGTAA---ATAAGGACAACTA--ATAAACATGT-A-CATT--TT-TGGTCAGAGATACAAGTCACACAAA------GTCAGAGAAA-TAAAATGA---GGAGG-------G-A-----GAT-G---TATA-CGC-CAAAAAT--CATT-GATAT-CAGACTAAATCATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCACTCCAAAAATACTT-AGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTTTCTGGT-ATGTTCAGACGTA--G-TCAT-CT--AAAGTAT----TGA-TTTTCA--ATGACAATTGTGTAT----TATTAGTTTATATT-----AAAT-TGAAGAACTCG--TAAG--ATGTACGAACTTT-----CATT-CTTTT---GTATT-TAC-TAT-ATACAATACAAATTTTATACGTT--CGAAGTTCAA-ACCAAATCCAATG-TCAGCTGTGTTACATGTTGC-ACATGCTTCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---ATAAG---GAATCTC---GATTAAT-CG--TCAAGTACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTTCA-TACATGT--AA--C-TTGAGTTCAAA-TAATGAAA--TAAAATAAA----TTAG--TTTGAT-CCAGCGATTTTGAAAAAAAAAGGGGGGGGGTG------TGTGCTAGATCATATCAAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGAC---TTA-TGAACATTTTTT-GT--GGTAAATTTTT-ATCTG-CATTGATGTTCAA-AGAAGAAGGGG--ATGCATGGGGTTTCC-AATCCCCAGTG-CGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGC--CATTCTAGCATGG-TGATAACAAGTTATCA-TAATAAACT-AAAAA---T-GC-AGGAATTCAGAAATT---ATAATTCTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAG-TTTTCA--CGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCAC-AACTGTCCTAGAGTTGGAAATTGA--GAAAATTCGTTTCCT-------TTACACAAGCTGCATAAAGACAAAT-CAACT-AGGCGAAA-CG-TGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----GGAGAGAGAAGAATG-GAAAACTT--AA-TTAACAAGTTA--TGCACGTACATGTACCGTA------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACACTGCAC-TTGAC--ATTTTATAAAGCATTAATAA--AAATGATTTGCCCGTAAA-CAAATATTTGACTCATTTTTGT----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCACTTG---AA-CGTCAAGT-ACT-TTGATCGCAGGGGATATGT-ACAT
gi|10 : CGAATCCATTTGAAATTCTT--TAACA-TA-------AA--C-TTGAGGTCAAA-TATTGAAA--TAAAAT-AAATAATTAG--TTTGAT-CCAGCTATTTTGAAAAAAAGAGGGGGGGGG-GGCAGATTGCGCTAGATCATATCCAACGAA-TCGCTAAAAATCGCTCAGCTTTTAATCTTAT-ATCCACTAT-GATCAA--TTA----TTTTTATC-AACATTTTT-CGTGGG-TAAATTTTCAAGCTGCTA-TGATGTTCAAGAGGA
gi|11 : TGACGGCTTT-TAAATTAA-ACAGG-C-ATGCAATTAAGA-TAATTATAATCTATT-TTATAG------GTAAAATTCGATCTT-TGAAAGTTCCCAGTCTGTT------TTC-TATAATAC-AT--G-CGTA----AAATAAA-TT-C--C--T---GG--GCAGTACTTCTT-TAATAAT-------------------ATA--GAGTGCTGCA--CGCGATGCAAGCATAATTTTTATATGAATTCCAAT-TA--TCAGATATGA--------TAACCAGTA--ATGC-TGGTGA---ATAAa
gi|12 : A-TCTTTGAT-GTGTATCTTCAGATCGCA-GGCACAC-GCAC-TTGAC--GTTTTA---AGCATTAATAATAAAAAAAAATGCCTGTAAA-CAAATATTTGACTGTTTTTT-TGTTTTGTTTTTGTTT-ACGGGAGGATTTCTAAAAA------AT----CAAATGTATT-TCA---A---AACCGT-AATC-ACC-TTGATCGCAGGGGATATGTAACAT
gi|13 : GGTAA---ATGAGGACAAGTACCATACTGAGGT-A-TATT--TC-TGGTCAGAGATACAAGTTACACAAA------GTCAGAGGAT-GAAAACAA---AGAGG-------G-GAAAAAGAT-G-----TA-CTC-CTAAAAT--CACG-GAAGC-CAGACTAAATCATT-TATCGTTA-T---GGT-C-ACCATACAATGATAAT--TCCGA--GTGACTTCCCAAAGTTTCA-Taggcgtagcactga
gi|15 : TT-CTTGC-TTA--T-ACAGGTTGTCGTTC---GTG-ACGGACGG-----TA-----------TGATAATA-T---GA-AGG--TGGGGACGCATATAAATGGGTTAAACATAACGGATGGCAACGAT---ATGACTACT-ACCCAGTGC-TCGG-TTAAAAT-CTAACCGG--------TT-------CGGTTAGCCAGGCTCTTAGgc
gi|16 : CAG-GCAC-TTGACCCGTTTT-TAAA-TATTGATAA--AAATCCTT--CCCATAAA-CAAA-ATT-AATTTATTTTT-T----------TGTTTAACGGGAGATTTTTT-----TTTTTTATTTGACAA---TATT-AAA---A---AATCGTCAAGT-GCC-T
gi|17 : AGAACTTTAGT-GCTGTCCGAAAT-TAT-TTTCTCCAC--CACAGG-AA-GCCTTGTA---CA-CAAACACCGAAGCTTTTTGAATTTCTT--GAACA-TA-------AA--C-TTCAAGCCAAA-TATTGAAA--TAgtg
gi|18 : ttATGAAATAAGAAA---T-GC-AGCAATTCAGAATTTTAAAAAATTAT---CGATCAACTGGTGAACT--GAATTTACG--ACTAATCGGTTA------------------CAAAATTTTTCAT-CGA-CTGTCtgag
gi|19 : aaactaaaCCTTCCA--ATGACAATTGTGTGT----TATTAGTTTACAAG-----GAAT----AGAACCCG--TAAG--CTGTGCGAA---------------TCCT---GTATTACATGTAT-ATACAATA-AAA----
gi|2 : GGCTG-TATAAAGGGATTGG-CGTA----AAATAAAACTACAGC--TTTAGG--ACAGTATTACCCCTGATAATCTTGCGAGT-----TTTGCATAAAGAATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATA-AATTCCCA-ACGC--------T-ACCATTATGATTCTTGTAAA---ATAAC--CAATTA--ATACACATGT-AACATT---C-TGGTCAGAGATATACGTCACACAAA------GTCAGAGAATTGAAAATGA---GGAGG-------C-G-----GAT-G---TATA-CGC-CTAAATT--CATG-GAGAT-CAGGCTAAATAATG-TATCTTCA-TTTTGATTA-AC--CAT-ATGTT--TTTCCTGG--GTGACTTTCCAACATT-------------ACTTTAGATTGGGAAAG-AAAT-GAAAT-TTTCATCATCTGAAACTAA-TATTAGCA--TATTTTCT--T-AT-ATGTTCAGACGTACTG-TCATTCT--AAAGTAT----T-ACTTTTCA-------AATTG----------------------------------GAAGAACTCG--TAAG--ACGTAGAAATTTT-----AATTTCTTTT---GTATT-TAT-TATTATACAATA-AAAG---ATATGTTTTCAAAGTTCAATACCAAATCAAATG-T-AGCTGTGTTAC-TGTTGC-ACATGCATCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAG---GAATCTCGGTGATTAAT-CGT-CCAAGTACTTTAGTTGCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAGGAA-TCCTTGAACAGCAACAAACTTCGAATCCATTTGAATTTCTTGTTTACA-TACATGT--AAACT-TTGAGTTCAAA-TAATGAAA--TAAAAT-AA----TTAGGCTTTGATTCCAGCGATT----GAAAAAAAGGGGGG---------------CTAGATCATATCCAACGAAATCGCTTAATAT----------TTA-TCC-ATCA---ACTATTGAAACAACTTAAGACTTTTTATTGAATATTTTTTTGTGGGGTAAATTTCTA-TCTGCCATTGATGTTCAAGAGGAAAAGGGGCAGTGCATGGG-TTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCT-AAATGGAATG---GCAGCATTCTAGCATGGTTGATAACAAGTTATCATTTATAAACTAAAAAA---TTGCGAGGAATTCAGAAATT---ATAATTCTGAATGATTAACCGGTGAATTCAGAAGTT--GAAAAAAA------A------------------CAAAGTTTTTCACCGGACCTGTCAT--------------T--------------A-TACTGTTCTGCCGTTCACAAACTTGCATA-AGTT-GAAATTGAAGAAAAATTCGTT-CCT-------TTACAC-AGCTGCAT-AAGACAAATACAACTAAGGCGAAAGCGTTGGATTTCGCGTTTCATCGAAGCAGGGGGGGGGGG-------------AGGATGTG-AAACTT--AATTTAACAAGTTGATTGCACGTACATGTA-CG-GGTATGTTGTTTTCAAATTCTTCAATGGTGT-TTTTCAGATCACAGG-CACAT-GCACTTTGA---ATTTTATAAAGCATTAAT----AAATAATTTGCCCGTAAATCAAATATTTGACTCA-TTTT-T----------TGTTT-ACGGGAGA--TTTT-----TTTTTTAT----CAAATGTATT-TCA---ACTTGA-CGT-AAGT-ACCTTTGATCGCA----GTATGT-ACATta
gi|20 : TT-----TTTTTTAT----CAAATGTATTATCA---A---AC-AGTT-AGTAACC-TTGATCACAAGGGGTATGC-gtaacataggtgaggacttgat
gi|21 : TCGTAATTTCTTGC-ATG--T-ACGAAATGTCGTTCCGAGTG-CGGGACAG-----TATC
gi|3 : ATTCCGGATTTGCGTTATT-CTTGCGTTA--T-ACGAGTTG-CGTTC---GTG-CGGGACGGCTTGATATCCCAAGCTTT-GAT-GTA-TTGTCATAA----GGGGACGTT-----ATGCATTAAA-ACA-CGGATGGATACGATCATTAGTCCGATTACTGAGTACT-CGGTTTAAAGTGCTAACCGGATAGAC-AAGT-TGTAACCATT-ATCAGCTTATTAGT-C-GTACCTCAAACAAATATT-GCACA--C--G-AA---AATTAGGAA---------------G--GAGGCAGA-----GTAT-TTCATAGG-------TATATCATGTACA-CGATA--T-ATC--AAGTGGGT-CTCTTGCAAATTAATAC----C-ATGCATTTACGATTGA-TA-AATTCC-TGTTACAATGCAAGGTAAAATTCGATCTTATGAAAGTCCCTAGGC-GCTGTTAGGCTGATATAAAGCAAT--GACG-A----AAATAAA-CTACAGCAAT--AGGGCACAGTATTACCC-TCATACTC-TGCGAGT-----A--G-ATAAG-AATGC-GCA--CT--AG----GCAGGATTTTCTCATGAATTTCAAT-TAATTCCCA-GCCAAGCAAGGTT-ACCATTATGAATCTTGGT-A---ATA---CCAATTA--A-AC-CATGT-A--ATTTATC-TG---AGCGATATACGTCACACAA--------TCAGAGAAT-GAAAATAAGAGGGAGG-------GAG-----GATCGAATTATACCGCGCACAAATTGCATGAGAGATACAGGCTAAATAATGATATCTTCGCT---GAT-A-AC----C-ATGTT--C--CTTGGCAGTGACT----A-------A-TCCAG-CATACT--AGCT-GGGAAAGAAAATAGAAAT-TTTCAT--ACTGAA-CTAAAAATTAG-----ATTATTT--TAATAATATTCAGAC-TAC-G-TCAT-CTAAAAAGTAT---ATGACTTTTCAATATGG-AACTTCATCTAAGATATTACTTTGCA-------AAATGTAACGATATCGATTAAGGAACAGACGGAATTTATTTAAATT-CTTTTGTAGTATT-TA--TAT-ATACCATA-AAA----ATATGT----AAAGTTTCA-ACCAAATCAAATGATCAGCCG-G--ACATG--GCAACATGTCATCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCA-------ATAAGAGCAAGCCTCGG-AGTTAATGCGATCCAAGAACTTTAGT-GCGGTCTGAACCATATATTTCTCCACGACG-AAG-AAGTAATTGAACAGCA-CAAACTTCG-ATCCA-TGGAATTTCTT--TTACATTACATGTTAAA--CATTGA--TTAAATTAATGAAAATTAAATT-AA----TTAG--TT---T-CCAGCGATTTTAAGAAAAA
gi|4 : CCGGATTTTCGTAATT-CTTGC-TTAAAT-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGAT-GTA-T---AA------------CGC------ATG--TTAAATNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN-NNNNNNNNNNNNNNAGGTTATTAGTACTGTA-CTTAAACAACTATTGTCACA--C--ACAA---AA--AAGAGAGAGAGAGGGGGGGGG--GGGG-GGA-----ATG--TTCAAAGG-------TAT-----GTACA-CGATG--G-TTAAAAAGTTGATTCTCTT-CAAATTAA-AC-TG-CCATACAATTACGA-TGATTATAATCCCTTGTTACAGTGT-AGGTAAACTTCGATCTT-TGAAAGTTCCCT-----------GGCTG-CATAAGGC-AT--G-CGTA----AAATA---------------AGG--ACAGTATTACCC-TGATAATCTTGCGAGTGTGGAT--G-A-AGGAAATGCTGCAGCC---AT----GCATGGTTTTCTCATGAATTTCAA-ATAATT-TCA-ATGA--------T-ACTTTAATATCTTTTGGTAAACTATAAGGAC-ATTA--ATTCACATGTGA-CATT--TCTTGGTCAGAAA-ATA------ATGAAGGGTGTGTGTGTGGGG-GGGGGTGG---GGGGGGGGGGGGG-G-----GGG-G---GGTA-CGT-CCTAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-ACAT--T---ATGTT--T--CCTGA--GTGACTTCCCAACATTTCT-CCTGGAAATACTTCGGAT--GAAAAA-AAAT-GAAAGGTTTCACCAACTGAA-CTAAATATAAGCATTTATTTTTC--TTAT-ATGTTCAGACGTAC-ATTCAT-CT--GAAGTATATCATTACTTTTCA--ATGACAATTGTGTGT----TATTAGTTTATATTATATAAAAAG-GAAGAACTCG--TAAG--ATGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-CAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAAAG-TCAGCTGTGTTACATGTTGT-ACA
gi|5 : GATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTGGCGGGACGG-----TATCC-AGGCTTTTGAT-GTAAT---AATAAAGATGGGAACAT------ATGCATTAAAAACAACGGATGGCAACGAT---TAGCCGATTAACTGTGTAC-TCGGTTTAAAGTGC-AACCGGATAGACAATTTGTACACCGATTAATCAGGTTATTAGTACAGTA-CTTAAACAAA-ATTGGCACA--C--G-AA---AA-----AG---------------G--GGGG-GTA-----ATAATTTCATAGGTAATGTATAT---ATATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAA-TACG--TGATTA-AATTCCTTGTTACATCGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCA-TTG-TAGGCTG-T
gi|6 : TTCCGGAGTTTCGTAATT-TTTGC-TTA--TTACGATTTGTCGTTC---GTG-CAGGACGG-----TATCCCAAGCTTTTGTT-GTA-----AAT------------GT------GTGCGTTGAATACAACGGATGACAACGAT---TAGCCTACTGA----GTAC-TCGGTTTAAAGTGCTAACCTGCTAGACAATTT-GTAACCGATTAATCAGGTTATTAGTATGG-------------TATTGGCACACCC--A-AA---AA--AAGAG---------------GAAAGGG-GGAGGGGTATA--TTCAAAAG-------TAT---GTATAAA-CGATG--T-ATAAACAGTTCGTGCTTTT-CAAATTAA-AC-TGCC-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCTTGGCAGTTA-TAGGCTG-TATAAAGg
gi|7 : ATAAACTAAAAAAAATC-GC-AGGAATTCAGAA-TT---ATAATTATGAACGATTAACCGGTGAATTCATCAGTT--G--AAAGA------ATTAACAACTAATCAGTTACAAAGTTTTT-A-CTGA-CTGTCAT--------------TCTTTCTGACAAAATATTACTGCTCTGCCGTTCACAAACTGTCCTAGAGTTGGAAATTGA--GAAAATACGTTCC-T-------TTACACAAGCTGCCTAAAGACAAATACAGCT-AG----AA-TGTGGA--TTCGCG-TTCATC-AAGTATAGGGGAAAAACAAAACA-----AAA-ACA---AAACTGGGAA-CTAACAAGTTA--TGCACGTACAT--------------------------CTTTGAT-GTGCATTTTCAGATCGCA-GTCACAC-GCAA-TTGAC--TTTTTATAAA
gi|8 : AAACAAATTCTGTCATA--CATG-AACAGAA--AAGGG---------------G--AGGG-GGA-----GT-----CAAAAA--------AT---TTGTTAATCAATGACTGATCAGA-TTTGATGATCTT-CAAAGTAA-CT-TC-C-ATACAATTGCGA-TAATTAT-ACCTCATGTT----T-C-AAATAAAAC----TCTG-TAAAAATT-CCTGGT------CAGGCTT-TATAATGC-AT--A-TGTAAATTAAATAAA-CTAC--C------GG--GCAGTATTACAC-AGATAA----GAGTGT-----T--G-ATAA-CAATTCTACA--C----T----GCAa
gi|9 : ------------------CAAAGTTTC-CATC-GA-TTGCCATCCTTTCTGGCTCAAT--------------ATTACT--TCTGCCATTCACAAACTGTCATAGGGTTAGAAATTGG--GGAAATAAGTCCCTTAACTGAGTTACACAAACTGCCTAAAG------ACAGCC-AGACG-AG-CGTTGA--TTCGCT-TACA---AAGTA-----GGAATA----ACA-----AA--AC--G-AACCTGGGAA-CCAACAAGTTA--TGCACGT--ATGTA-C--A------TGTGTTGAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-aaca
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TGGGGGGGGGGGGGGGGGGGGGCGTACTGCATTGAATTATCTTGTATTCAAACATTAGATATTCCCAGAATGGTCCTCCCACGAAGCTTATACTGATGATAGAATTTCATACAAAAAAACTTGATGGACATATCAACTGAACTATATATTTAAAACTTTT
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 111 11111 44444444444444 111111 111 1 22222222222 1 1 1111 111 444444444444444 2222222222 22222222222222 1111 1111 222222 1 1111 333333333 222222 111 222222222 111 22222222 111 11 11 11111 2222222 111 444444444444444 1111 11 111 111 222222 11111 11 22222222222 11 11 1 1 1 1 11 1111 1 1111 1 11 3333 111 111111111 5555555555555 11 11 222222 111 11 2222 111 1 1 1 5555555 222 111 1 33 1 1 1 11 1 1 1 11 2222222 1111 11 1 2222 11 1 55555555555555 1 5555555555 1 1 22222 11111 11 11 11 11 1 1 1 1 222 11 1 1 22222 1 111 11111 7777777777777777777777777 222 00000000000000000000000000000 11 3333333 1 11 11 1 1 888888888888888888888888888 111 1 11 55555555555 2 111 1111 1 444444444444 1 22222 1111 2222222222 11 1
lowQualScore : 5 5 77 5 000 5 44444 2 3 6 66666666666666 3 6 999999 44 7 2 111 0 0 0 4 3 2 2 2 6 77777777777 2 3 0 1 0 8 99 1111 111 99 111111111111111 99 6 1111111111 1 88888888888888 6 0000 0 5 5 4444 5 5 8 1 222 5 5 666666 5 1 7 99 6 4444 6 3 222222222 99 6 99 222222 6 777 99 666666666 222 0 3 8 99999999 8 0 0 1 111 55 0 11 0 6 8 11 33333 0 8 3333333 99 444 222222222222222 8 9999 8 8 22 11 8 8 0 88 8 444 111 666666 66666 11 0 0 66666666666 66 22 0 0 5 2 0 3 2 33 5555 0 2 6666 0 33 3333 8 111 5 999999999 1 3333333333333 11 11 8 000000 8 444 8 11 8 8 5555 777 0 0 2 3 3 3 3 0 1 4444444 333 888 3 11 1 0 0 0 0 33 2 0 0 2 0 0 0 11 1 8 2222222 2222 77 8 1 11 0 1111 33 3 0 3 0 44444444444444 3 8888888888 3 3 77777 7 7 00000 88 99 6 6 44 6 7 6 88 5 5 5 5 111 88 5 5 1 3 22222 0 9 777 1 2 2 77777 8888888888888888888888888 0 0 666 8 88888888888888888888888888888 3 33 3 1 2 6 33 1 6 6 2222222 3 1 3 3 9 0 6 33 3 33 0 3 0 555555555555555555555555555 888 0 33 2 2 44444444444 2 2 8 8 0 8 0 8 8 222 11 2 4444 0 3 0 3 3 0 3 444444444444 0 9 00000 7777 0 8 7777777777 44 8 8 6 0
lowQualScore : . . .. . ... . ..... . . . .............. . . ...... .. . . ... . . . . . . . . . ........... . . . . . . .. .... ... .. ............... .. . .......... . .............. . .... . . . .... . . . . ... . . ...... . . . .. . .... . . ......... .. . .. ...... . ... .. ......... ... . . . ........ . . . . ... .. . .. . . . .. ..... . . ....... .. ... ............... . .... . . .. .. . . . .. . ... ... ...... ..... .. . . ........... .. .. . . . . . . . .. .... . . .... . .. .... . ... . ......... . ............. .. .. . ...... . ... . .. . . .... ... . . . . . . . . . ....... ... ... . .. . . . . . .. . . . . . . . .. . . ....... .... .. . . .. . .... .. . . . . .............. . .......... . . ..... . . ..... .. .. . . .. . . . .. . . . . ... .. . . . . ..... . . ... . . . ..... ......................... . . ... . ............................. . .. . . . . .. . . . ....... . . . . . . . .. . .. . . . ........................... ... . .. . . ........... . . . . . . . . . ... .. . .... . . . . . . . ............ . . ..... .... . . .......... .. . . . .
lowQualScore : 7 7 99 7 000 7 33333 5 2 7 55555555555555 7 7 222222 77 5 5 777 5 8 5 0 2 5 0 5 5 22222222222 5 3 8 4 8 0 22 2222 777 22 777777777777777 22 7 2222222222 0 77777777777777 7 8888 7 7 7 6666 7 7 7 7 666 7 7 666666 0 0 7 22 7 2222 7 2 777777777 22 7 77 777777 7 000 22 777777777 222 8 2 0 00000000 0 8 8 7 777 66 8 00 8 0 0 22 00000 8 8 8888888 00 000 222222222222222 0 6666 0 0 00 00 0 0 6 66 0 000 888 666666 00000 00 8 8 77777777777 00 55 0 0 0 5 0 2 5 88 5555 0 5 5555 0 88 0000 8 888 0 666666666 4 0000000000000 00 00 2 666666 0 000 0 88 0 0 0000 000 0 0 5 2 2 2 2 0 0 3333333 333 333 3 77 0 0 2 0 0 88 5 0 0 5 0 8 8 00 4 0 8888888 2222 00 0 4 00 0 2222 88 2 0 2 2 33333333333333 3 3333333333 3 3 77777 3 3 33333 77 33 7 7 77 7 3 7 00 0 5 5 0 000 00 5 5 0 2 22222 0 8 555 0 5 5 55555 8888888888888888888888888 8 8 888 0 55555555555555555555555555555 2 22 2 0 5 5 88 0 5 5 5555555 2 0 2 2 2 0 5 22 2 88 0 2 0 555555555555555555555555555 555 0 88 5 5 55555555555 5 5 0 0 8 0 0 0 0 444 66 5 0000 8 2 0 2 2 2 2 888888888888 0 8 00000 0000 8 0 8888888888 00 0 0 5 0
consensus : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA-T---AATAAA--TGGGGACGT-AT------GCGTTAAANACAACGGATGGCAACGAT---TAGCCTACTNACCGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-ATTT-TNNACCGATTAATC-AGGTTATTAGTACGGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCANAGG-------TAT---ATGTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCAGTTG-TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AAGG-AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATATAATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATT--TC-TGGTCAGAGATATANGTCACACAAA------GTCAGAGAAT-GAAAATGA---GGAGG-------G-G-----GAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTT--TNAT-ATGTTCAGACGTAC-G-TCAT-CT--AAAGTAT---ATGACTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACATT-----AAATGTGAAGAACTCG--TAAG--ACGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGG-GATTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA-TACATGT--AA--C-TTGAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATCGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCCGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AA-CGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
Reference ( family-1930 ) : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA-T---AATAAA--TGGGGACGT-AT------GCGTTAAANACAACGGATGGCAACGAT---TAGCCTACTNACCGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-ATTT-TNNACCGATTAATC-AGGTTATTAGTACGGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCANAGG-------TAT---ATGTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCAGTTG-TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AAGG-AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATATAATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATT--TC-TGGTCAGAGATATANGTCACACAAA------GTCAGAGAAT-GAAAATGA---GGAGG-------G-G-----GAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTT--TNAT-ATGTTCAGACGTAC-G-TCAT-CT--AAAGTAT---ATGACTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACATT-----AAATGTGAAGAACTCG--TAAG--ACGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGG-GATTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA-TACATGT--AA--C-TTGAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATCGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCCGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AA-CGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
gi|1 : ATTCCGGATTTTCGTAACT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGAACG-----TATCCCAAGCTTTTGATG-TA-T---AATAAAA-TGGGAACAT-AT------GCATTAAANNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN-NNNNNNNNNNNNNNNAGGTTATTAGTACAGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCATAGG-------TA----ATATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAATTACGA-TGATTAAATTCCCTTGTTACAATGC-AGGTAAAATTCAATCTT-TGAAAGTTCCCTGGCAGTTG-TAAGCTA-TATAAGGCG-T--G-CTTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AAGA-AATGCTGTA--C---AT----GCATGGTTTTCTCATGAATTTCAATATAATTTCCA-ATGA--------T-ACCATTATGATCTTTGGTAA---ATAAGGACAACTA--ATAAACATGT-A-CATT--TT-TGGTCAGAGATACAAGTCACACAAA------GTCAGAGAAA-TAAAATGA---GGAGG-------G-A-----GAT-G---TATA-CGC-CAAAAAT--CATT-GATAT-CAGACTAAATCATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCACTCCAAAAATACTT-AGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTTTCTGGT-ATGTTCAGACGTA--G-TCAT-CT--AAAGTAT----TGA-TTTTCA--ATGACAATTGTGTAT----TATTAGTTTATATT-----AAAT-TGAAGAACTCG--TAAG--ATGTACGAACTTT-----CATT-CTTTT---GTATT-TAC-TAT-ATACAATACAAATTTTATACGTT--CGAAGTTCAA-ACCAAATCCAATG-TCAGCTGTGTTACATGTTGC-ACATGCTTCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---ATAAG---GAATCTC---GATTAAT-CG--TCAAGTACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTTCA-TACATGT--AA--C-TTGAGTTCAAA-TAATGAAA--TAAAATAAA----TTAG--TTTGAT-CCAGCGATTTTGAAAAAAAAAGGGGGGGGGTG------TGTGCTAGATCATATCAAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGAC---TTAT-GAACATTTTTT-GT--GGTAAATTTTT-ATCTG-CATTGATGTTCAA-AGAAGAAGGGG--ATGCATGGGGTTTCC-AATCCCCAGTG-CGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGC--CATTCTAGCATGG-TGATAACAAGTTATCA-TAATAAACT-AAAAA---T-GC-AGGAATTCAGAAATT---ATAATTCTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAG-TTTTCA--CGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCAC-AACTGTCCTAGAGTTGGAAATTGA--GAAAATTCGTTTCCT-------TTACACAAGCTGCATAAAGACAAAT-CAACT-AGGCGAAA-CG-TGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----GGAGAGAGAAGAATG-GAAAACTT--AA-TTAACAAGTTA--TGCACGTACATGTACCGTA------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACACTGCAC-TTGAC--ATTTTATAAAGCATTAATAA--AAATGATTTGCCCGTAAA-CAAATATTTGACTCATTTTTGT----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCACTTG---AA-CGTCAAGT-ACT-TTGATCGCAGGGGATATGT-ACAT
gi|10 : CGAATCCATTTGAAATTCTT--TAACA-TA-------AA--C-TTGAGGTCAAA-TATTGAAA--TAAAAT-AAATAATTAG--TTTGAT-CCAGCTATTTTGAAAAAAAGAGGGGGGGGG-GGCAGATTGCGCTAGATCATATCCAACGAA-TCGCTAAAAATCGCTCAGCTTTTAATCTTAT-ATCCACTAT-GATCAA--TTA----TTTTTATC-AACATTTTT-CGTGGG-TAAATTTTCAAGCTGCTA-TGATGTTCAAGAGGA
gi|11 : TGACGGCTTT-TAAATTAA-ACAGG-C-ATGCAATTAAGA-TAATTATAATCTATT-TTATAG------GTAAAATTCGATCTT-TGAAAGTTCCCAGTCTGTT------TTC-TATAATAC-AT--G-CGTA----AAATAAA-TT-C--C--T---GG--GCAGTACTTCTT-TAATAAT---------------AT-A--G-AGTGCTGCA--CGCGATGCAAGCATAATTTTTATATGAATTCCAAT-TA--TCAGATATGA--------TAACCAGTA--ATGC-TGGTGA---ATAAa
gi|12 : A-TCTTTGAT-GTGTATCTTCAGATCGCA-GGCACAC-GCAC-TTGAC--GTTTTA---AGCATTAATAATAAAAAAAAATGCCTGTAAA-CAAATATTTGACTGTTTTTT-TGTTTTGTTTTTGTTT-ACGGGAGGATTTCTAAAAA------AT----CAAATGTATT-TCA---A---AACCGT-AATC-ACC-TTGATCGCAGGGGATATGTAACAT
gi|13 : GGTAA---ATGAGGACAAGTACCATACTGAGGT-A-TATT--TC-TGGTCAGAGATACAAGTTACACAAA------GTCAGAGGAT-GAAAACAA---AGAGG-------G-GAAAAAGAT-G-----TA-CTC-CTAAAAT--CACG-GAAGC-CAGACTAAATCATT-TATCGTTA-T---GGT-C-ACCATACAATGATAAT--TCCGA--GTGACTTCCCAAAGTTTCA-Taggcgtagcactga
gi|15 : TT-CTTGC-TTA--T-ACAGGTTGTCGTTC---GTG-ACGGACGG-----TAT-----------GATAATA-T---GA-AGG--TGGGGACGC-ATATAAATGGGTTAAACATAACGGATGGCAACGAT---ATGACTACT-ACCCAGTGCTCGG-TTAAAAT-CTAACCGG--------TT-------CGGTTAGCC-AGGCTCTTAGgc
gi|16 : CAG-GCAC-TTGACCCGTTTT-TAAA-TATTGATAA--AAATCCTT--CCCATAAA-CAAA-ATT-AATTTATTTTT-T----------TGTTTAACGGGAGATTTTTT-----TTTTTTATTTGACAA---TATT-AAA---A---AATCGTCAAGT-GCC-T
gi|17 : AGAACTTTAGT-GCTGTCCGAAAT-TAT-TTTCTCCAC--CACAGG-AA-GCCTTGTA---CA-CAAACACCGAAGCTTTTTGAATTTCTT--GAACA-TA-------AA--C-TTCAAGCCAAA-TATTGAAA--TAgtg
gi|18 : ttATGAAATAAGAAA---T-GC-AGCAATTCAGAATTTTAAAAAATTAT---CGATCAACTGGTGAACT--GAATTTACG--ACTAATCGGTTA------------------CAAAATTTTTCAT-CGA-CTGTCtgag
gi|19 : aaactaaaCCTTCCA--ATGACAATTGTGTGT----TATTAGTTTACAAG-----GAAT----AGAACCCG--TAAG--CTGTGCGAA---------------TCCT---GTATTACATGTAT-ATACAATA-AAA----
gi|2 : GGCTG-TATAAAGGGATTGG-CGTA----AAATAAAACTACAGC--TTTAGG--ACAGTATTACCCCTGATAATCTTGCGAGT-TTTGCAT-AAAG-AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATA-AATTCCCA-ACGC--------T-ACCATTATGATTCTTGTAAA---ATAAC--CAATTA--ATACACATGT-AACATT---C-TGGTCAGAGATATACGTCACACAAA------GTCAGAGAATTGAAAATGA---GGAGG-------C-G-----GAT-G---TATA-CGC-CTAAATT--CATG-GAGAT-CAGGCTAAATAATG-TATCTTCA-TTTTGATTA-AC--CAT-ATGTT--TTTCCTGG--GTGACTTTCCAACATT-------------ACTTTAGATTGGGAAAG-AAAT-GAAAT-TTTCATCATCTGAAACTAA-TATTAGCA--TATTTTCT--T-AT-ATGTTCAGACGTACTG-TCATTCT--AAAGTAT----T-ACTTTTCA-------AATTG----------------------------------GAAGAACTCG--TAAG--ACGTAGAAATTTT-----AATTTCTTTT---GTATT-TAT-TATTATACAATA-AAAG---ATATGTTTTCAAAGTTCAATACCAAATCAAATG-T-AGCTGTGTTAC-TGTTGC-ACATGCATCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAG---GAATCTCGGTGATTAAT-CGT-CCAAGTACTTTAGTTGCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAGGAA-TCCTTGAACAGCAACAAACTTCGAATCCATTTGAATTTCTTGTTTACA-TACATGT--AAACT-TTGAGTTCAAA-TAATGAAA--TAAAAT-AA----TTAGGCTTTGATTCCAGCGATT----GAAAAAAAGGGGGG---------------CTAGATCATATCCAACGAAATCGCTTAATAT----------TTA-TCC-ATCA---ACTATTGAAACAACTTAAGACTTTTTATTGAATATTTTTTTGTGGGGTAAATTTCTA-TCTGCCATTGATGTTCAAGAGGAAAAGGGGCAGTGCATGGG-TTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCT-AAATGGAATG---GCAGCATTCTAGCATGGTTGATAACAAGTTATCATTTATAAACTAAAAAA---TTGCGAGGAATTCAGAAATT---ATAATTCTGAATGATTAACCGGTGAATTCAGAAGTT--GAAAAAAA------A------------------CAAAGTTTTTCACCGGACCTGTCAT--------------T--------------A-TACTGTTCTGCCGTTCACAAACTTGCATA-AGTT-GAAATTGAAGAAAAATTCGTT-CCT-------TTACAC-AGCTGCAT-AAGACAAATACAACTAAGGCGAAAGCGTTGGATTTCGCGTTTCATCGAAGCAGGGGGGGGGGG-------------AGGATGTG-AAACTT--AATTTAACAAGTTGATTGCACGTACATGTA-CG-GGTATGTTGTTTTCAAATTCTTCAATGGTGT-TTTTCAGATCACAGG-CACAT-GCACTTTGA---ATTTTATAAAGCATTAAT----AAATAATTTGCCCGTAAATCAAATATTTGACTCA-TTTT-T----------TGTTT-ACGGGAGA--TTTT-----TTTTTTAT----CAAATGTATT-TCA---ACTTGA-CGT-AAGT-ACCTTTGATCGCA----GTATGT-ACATta
gi|20 : TT-----TTTTTTAT----CAAATGTATTATCA---A---AC-AGTT-AGTAACC-TTGATCACAAGGGGTATGC-gtaacataggtgaggacttgat
gi|21 : TCGTAATTTCTTGC-ATG--T-ACGAAATGTCGTTCCGAGTG-CGGGACAG-----TATC
gi|3 : ATTCCGGATTTGCGTTATT-CTTGCGTTA--T-ACGAGTTG-CGTTC---GTG-CGGGACGGCTTGATATCCCAAGCTTT-GATG-TA-TTGTCATAA----GGGGACGTTAT------GCATTAAA-ACA-CGGATGGATACGATCATTAGTCCGATTACTGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-AAGT-TGTAACCATT-ATC-AGCTTATTAGT-C-GTACCTCAAACAAATATT-GCACA--C--G-AA---AATTAGGAA---------------G--GAGGCAGA-----GTAT-TTCATAGG-------TATATCATGTACA-CGATA--T-ATC--AAGTGGGT-CTCTTGCAAATTAATAC----C-ATGCATTTACGATTGA-TA-AATTCC-TGTTACAATGCAAGGTAAAATTCGATCTTATGAAAGTCCCTAGGC-GCTGTTAGGCTGATATAAAGCAAT--GACG-A----AAATAAA-CTACAGCAAT--AGGGCACAGTATTACCC-TCATACTC-TGCGAGT-A--G-AT-AA-G-AATGC-GCA--CT--AG----GCAGGATTTTCTCATGAATTTCAAT-TAATTCCCA-GCCAAGCAAGGTT-ACCATTATGAATCTTGGT-A---ATA---CCAATTA--A-AC-CATGT-A--ATTTATC-TG---AGCGATATACGTCACACAA--------TCAGAGAAT-GAAAATAAGAGGGAGG-------GAG-----GATCGAATTATACCGCGCACAAATTGCATGAGAGATACAGGCTAAATAATGATATCTTCGCT---GAT-A-AC----C-ATGTT--C--CTTGGCAGTGACT----A-------A-TCCAG-CATACT--AGCT-GGGAAAGAAAATAGAAAT-TTTCAT--ACTGAA-CTAAAAATTAG-----ATTATTT--TAATAATATTCAGAC-TAC-G-TCAT-CTAAAAAGTAT---ATGACTTTTCAATATGG-AACTTCATCTAAGATATTACTTTGCA-------AAATGTAACGATATCGATTAAGGAACAGACGGAATTTATTTAAATT-CTTTTGTAGTATT-TA--TAT-ATACCATA-AAA----ATATGT----AAAGTTTCA-ACCAAATCAAATGATCAGCCG-G--ACATG--GCAACATGTCATCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCA-------ATAAGAGCAAGCCTCGG-AGTTAATGCGATCCAAGAACTTTAGT-GCGGTCTGAACCATATATTTCTCCACGACG-AAG-AAGTAATTGAACAGCA-CAAACTTCG-ATCCA-TGGAATTTCTT--TTACATTACATGTTAAA--CATTGA--TTAAATTAATGAAAATTAAATT-AA----TTAG--TT---T-CCAGCGATTTTAAGAAAAA
gi|4 : CCGGATTTTCGTAATT-CTTGC-TTAAAT-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA-T---AA------------CGC-AT------G--TTAAATNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN-NNNNNNNNNNNNNNNAGGTTATTAGTACTGTA-CTTAAACAACTATTGTCACA--C--ACAA---AA--AAGAGAGAGAGAGGGGGGGGG--GGGG-GGA-----ATG--TTCAAAGG-------TAT-----GTACA-CGATG--G-TTAAAAAGTTGATTCTCTT-CAAATTAA-AC-TG-CCATACAATTACGA-TGATTATAATCCCTTGTTACAGTGT-AGGTAAACTTCGATCTT-TGAAAGTTCCCT-----------GGCTG-CATAAGGC-AT--G-CGTA----AAATA---------------AGG--ACAGTATTACCC-TGATAATCTTGCGAGTGTG-G-ATGAAGGAAATGCTGCAGCC---AT----GCATGGTTTTCTCATGAATTTCAA-ATAATT-TCA-ATGA--------T-ACTTTAATATCTTTTGGTAAACTATAAGGAC-ATTA--ATTCACATGTGA-CATT--TCTTGGTCAGAAA-ATA------ATGAAGGGTGTGTGTGTGGGG-GGGGGTGG---GGGGGGGGGGGGG-G-----GGG-G---GGTA-CGT-CCTAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-ACAT--T---ATGTT--T--CCTGA--GTGACTTCCCAACATTTCT-CCTGGAAATACTTCGGAT--GAAAAA-AAAT-GAAAGGTTTCACCAACTGAA-CTAAATATAAGCATTTATTTTTC--TTAT-ATGTTCAGACGTAC-ATTCAT-CT--GAAGTATATCATTACTTTTCA--ATGACAATTGTGTGT----TATTAGTTTATATTATATAAAAAG-GAAGAACTCG--TAAG--ATGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-CAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAAAG-TCAGCTGTGTTACATGTTGT-ACA
gi|5 : GATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTGGCGGGACGG-----TATCC-AGGCTTTTGATG-TAAT---AATAAAGATGGGAACAT-AT------GCATTAAAAACAACGGATGGCAACGAT---TAGCCGATTAACTGTGTACTCGGTTTAAAGTGC-AACCGGATAGACAATTTGTACACCGATTAATC-AGGTTATTAGTACAGTA-CTTAAACAAA-ATTGGCACA--C--G-AA---AA-----AG---------------G--GGGG-GTA-----ATAATTTCATAGGTAATGTATAT---ATATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAA-TACG--TGATTA-AATTCCTTGTTACATCGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCA-TTG-TAGGCTG-T
gi|6 : TTCCGGAGTTTCGTAATT-TTTGC-TTA--TTACGATTTGTCGTTC---GTG-CAGGACGG-----TATCCCAAGCTTTTGTTG-TA-----AAT------------GT-GT------GCGTTGAATACAACGGATGACAACGAT---TAGCCTACT----GAGTACTCGGTTTAAAGTGCTAACCTGCTAGACAATTT-GTAACCGATTAATC-AGGTTATTAGTATGG-------------TATTGGCACACCC--A-AA---AA--AAGAG---------------GAAAGGG-GGAGGGGTATA--TTCAAAAG-------TAT---GTATAAA-CGATG--T-ATAAACAGTTCGTGCTTTT-CAAATTAA-AC-TGCC-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCTTGGCAGTTA-TAGGCTG-TATAAAGg
gi|7 : ATAAACTAAAAAAAATC-GC-AGGAATTCAGAA-TT---ATAATTATGAACGATTAACCGGTGAATTCATCAGTT--G--AAAGA------ATTAACAACTAATCAGTTACAAAGTTTTT-A-CTGA-CTGTCAT--------------TCTTTCTGACAAAATATTACTGCTCTGCCGTTCACAAACTGTCCTAGAGTTGGAAATTGA--GAAAATACGTTCC-T-------TTACACAAGCTGCCTAAAGACAAATACAGCT-AG----AA-TGTGGA--TTCGCG-TTCATC-AAGTATAGGGGAAAAACAAAACA-----AAA-ACA---AAACTGGGAA-CTAACAAGTTA--TGCACGTACAT--------------------------CTTTGAT-GTGCATTTTCAGATCGCA-GTCACAC-GCAA-TTGAC--TTTTTATAAA
gi|8 : AAACAAATTCTGTCATA--CATG-AACAGAA--AAGGG---------------G--AGGG-GGA-----GT-----CAAAAA--------AT---TTGTTAATCAATGACTGATCAGA-TTTGATGATCTT-CAAAGTAA-CT-TC-C-ATACAATTGCGA-TAATTAT-ACCTCATGTT----T-C-AAATAAAAC----TCTG-TAAAAATT-CCTGGT------CAGGCTT-TATAATGC-AT--A-TGTAAATTAAATAAA-CTAC--C------GG--GCAGTATTACAC-AGATAA----GAGTGT-T--G-AT-AA-C-AATTCTACA--C----T----GCAa
gi|9 : ------------------CAAAGTTTC-CATC-GA-TTGCCATCCTTTCTGGCTCAAT--------------ATTACT--TCTGCCATTCACAAACTGTCATAGGGTTAGAAATTGG--GGAAATAAGTCCCTTAACTGAGTTACACAAACTGCCTAAAGACA------GCC-AGACGAG--CGTTGA--TTCGCT-TACA---AAGTAGGAATA---------ACA-----AA--ACG---AACCTGGGAA-CCAACAAGTTA--TGCACGTA--TGTA-C--A------TGTGTTGAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-aaca
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TGGGGGGGGGGGGGGGGGGGGGCGTACTGCATTGAATTATCTTGTATTCAAACATTAGATATTCCCAGAATGGTCCTCCCACGAAGCTTATACTGATGATAGAATTTCATACAAAAAAACTTGATGGACATATCAACTGAACTATATATTTAAAACTTTT
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 111 11111 44444444444444 111111 111 1 22222222222 1 1 1111 111 444444444444444 2222222222 22222222222222 1111 1111 222222 1 1111 333333333 222222 111 222222222 111 22222222 111 11 11 11111 2222222 111 444444444444444 1111 11 111 111 222222 11111 11 22222222222 11 11 1 1 1 1 11 1111 1 1111 1 11 3333 111 111111111 5555555555555 11 11 222222 111 11 2222 111 1 1 1 5555555 222 111 1 33 1 1 1 11 1 1 1 11 2222222 1111 11 1 2222 11 1 55555555555555 1 5555555555 1 1 22222 11111 11 11 11 11 1 1 1 1 222 11 1 1 22222 1 111 11111 7777777777777777777777777 222 00000000000000000000000000000 11 3333333 1 11 11 1 1 888888888888888888888888888 111 1 11 55555555555 2 111 1111 1 444444444444 1 22222 1111 2222222222 11 1
lowQualScore : 5 5 77 5 000 5 44444 2 3 6 66666666666666 3 6 999999 44 7 2 111 0 0 0 4 3 2 2 2 6 77777777777 2 3 0 1 0 8 99 1111 111 99 111111111111111 99 6 1111111111 1 88888888888888 6 0000 0 5 5 4444 5 5 8 1 222 5 5 666666 5 1 7 99 6 4444 6 3 222222222 99 6 99 222222 6 777 99 666666666 222 0 3 8 99999999 8 0 0 1 111 55 0 11 0 6 8 11 33333 0 8 3333333 99 444 222222222222222 8 9999 8 8 22 11 8 8 0 88 8 444 111 666666 66666 11 0 0 66666666666 66 22 0 0 5 2 0 3 2 33 5555 0 2 6666 0 33 3333 8 111 5 999999999 1 3333333333333 11 11 8 000000 8 444 8 11 8 8 5555 777 0 0 2 3 3 3 3 0 1 4444444 333 888 3 11 1 0 0 0 0 33 2 0 0 2 0 0 0 11 1 8 2222222 2222 77 8 1 11 0 1111 33 3 0 3 0 44444444444444 3 8888888888 3 3 77777 7 7 00000 88 99 6 6 44 6 7 6 88 5 5 5 5 111 88 5 5 1 3 22222 0 9 777 1 2 2 77777 8888888888888888888888888 0 0 666 8 88888888888888888888888888888 3 33 3 1 2 6 33 1 6 6 2222222 3 1 3 3 9 0 6 33 3 33 0 3 0 555555555555555555555555555 888 0 33 2 2 44444444444 2 2 8 8 0 8 0 8 8 222 11 2 4444 0 3 0 3 3 0 3 444444444444 0 9 00000 7777 0 8 7777777777 44 8 8 6 0
lowQualScore : . . .. . ... . ..... . . . .............. . . ...... .. . . ... . . . . . . . . . ........... . . . . . . .. .... ... .. ............... .. . .......... . .............. . .... . . . .... . . . . ... . . ...... . . . .. . .... . . ......... .. . .. ...... . ... .. ......... ... . . . ........ . . . . ... .. . .. . . . .. ..... . . ....... .. ... ............... . .... . . .. .. . . . .. . ... ... ...... ..... .. . . ........... .. .. . . . . . . . .. .... . . .... . .. .... . ... . ......... . ............. .. .. . ...... . ... . .. . . .... ... . . . . . . . . . ....... ... ... . .. . . . . . .. . . . . . . . .. . . ....... .... .. . . .. . .... .. . . . . .............. . .......... . . ..... . . ..... .. .. . . .. . . . .. . . . . ... .. . . . . ..... . . ... . . . ..... ......................... . . ... . ............................. . .. . . . . .. . . . ....... . . . . . . . .. . .. . . . ........................... ... . .. . . ........... . . . . . . . . . ... .. . .... . . . . . . . ............ . . ..... .... . . .......... .. . . . .
lowQualScore : 7 7 99 7 000 7 33333 5 2 7 55555555555555 7 7 222222 77 5 5 777 5 8 5 0 2 5 0 5 5 22222222222 5 3 8 4 8 0 22 2222 777 22 777777777777777 22 7 2222222222 0 77777777777777 7 8888 7 7 7 6666 7 7 7 7 666 7 7 666666 0 0 7 22 7 2222 7 2 777777777 22 7 77 777777 7 000 22 777777777 222 8 2 0 00000000 0 8 8 7 777 66 8 00 8 0 0 22 00000 8 8 8888888 00 000 222222222222222 0 6666 0 0 00 00 0 0 6 66 0 000 888 666666 00000 00 8 8 77777777777 00 55 0 0 0 5 0 2 5 88 5555 0 5 5555 0 88 0000 8 888 0 666666666 4 0000000000000 00 00 2 666666 0 000 0 88 0 0 0000 000 0 0 5 2 2 2 2 0 0 3333333 333 333 3 77 0 0 2 0 0 88 5 0 0 5 0 8 8 00 4 0 8888888 2222 00 0 4 00 0 2222 88 2 0 2 2 33333333333333 3 3333333333 3 3 77777 3 3 33333 77 33 7 7 77 7 3 7 00 0 5 5 0 000 00 5 5 0 2 22222 0 8 555 0 5 5 55555 8888888888888888888888888 8 8 888 0 55555555555555555555555555555 2 22 2 0 5 5 88 0 5 5 5555555 2 0 2 2 2 0 5 22 2 88 0 2 0 555555555555555555555555555 555 0 88 5 5 55555555555 5 5 0 0 8 0 0 0 0 444 66 5 0000 8 2 0 2 2 2 2 888888888888 0 8 00000 0000 8 0 8888888888 00 0 0 5 0
consensus : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA-T---AATAAA--TGGGGACGT-AT------GCGTTAAANACAACGGATGGCAACGAT---TAGCCTACTNACCGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-ATTT-TNNACCGATTAATC-AGGTTATTAGTACGGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCANAGG-------TAT---ATGTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCAGTTG-TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AAGG-AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATATAATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATT--TC-TGGTCAGAGATATANGTCACACAAA------GTCAGAGAAT-GAAAATGA---GGAGG-------G-G-----GAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTT--TNAT-ATGTTCAGACGTAC-G-TCAT-CT--AAAGTAT---ATGACTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACATT-----AAATGTGAAGAACTCG--TAAG--ACGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGG-GATTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA-TACATGT--AA--C-TTGAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATCGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCCGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AA-CGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
Reference ( family-1930 ) : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA-T---AATAAA--TGGGGACGT-AT------GCGTTAAANACAACGGATGGCAACGAT---TAGCCTACTNACCGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-ATTT-TNNACCGATTAATC-AGGTTATTAGTACGGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCANAGG-------TAT---ATGTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCAGTTG-TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AAGG-AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATATAATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATT--TC-TGGTCAGAGATATANGTCACACAAA------GTCAGAGAAT-GAAAATGA---GGAGG-------G-G-----GAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTT--TNAT-ATGTTCAGACGTAC-G-TCAT-CT--AAAGTAT---ATGACTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACATT-----AAATGTGAAGAACTCG--TAAG--ACGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGG-GATTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA-TACATGT--AA--C-TTGAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATCGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCCGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AA-CGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
gi|1 : ATTCCGGATTTTCGTAACT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGAACG-----TATCCCAAGCTTTTGATG-TA-T---AATAAAA-TGGGAACAT-AT------GCATTAAANNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN-NNNNNNNNNNNNNNNAGGTTATTAGTACAGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCATAGG-------TA----ATATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAATTACGA-TGATTAAATTCCCTTGTTACAATGC-AGGTAAAATTCAATCTT-TGAAAGTTCCCTGGCAGTTG-TAAGCTA-TATAAGGCG-T--G-CTTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AAGA-AATGCTGTA--C---AT----GCATGGTTTTCTCATGAATTTCAATATAATTTCCA-ATGA--------T-ACCATTATGATCTTTGGTAA---ATAAGGACAACTA--ATAAACATGT-A-CATT--TT-TGGTCAGAGATACAAGTCACACAAA------GTCAGAGAAA-TAAAATGA---GGAGG-------G-A-----GAT-G---TATA-CGC-CAAAAAT--CATT-GATAT-CAGACTAAATCATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCACTCCAAAAATACTT-AGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTTTCTGGT-ATGTTCAGACGTA--G-TCAT-CT--AAAGTAT----TGA-TTTTCA--ATGACAATTGTGTAT----TATTAGTTTATATT-----AAAT-TGAAGAACTCG--TAAG--ATGTACGAACTTT-----CATT-CTTTT---GTATT-TAC-TAT-ATACAATACAAATTTTATACGTT--CGAAGTTCAA-ACCAAATCCAATG-TCAGCTGTGTTACATGTTGC-ACATGCTTCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---ATAAG---GAATCTC---GATTAAT-CG--TCAAGTACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTTCA-TACATGT--AA--C-TTGAGTTCAAA-TAATGAAA--TAAAATAAA----TTAG--TTTGAT-CCAGCGATTTTGAAAAAAAAAGGGGGGGGGTG------TGTGCTAGATCATATCAAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGAC---TTAT-GAACATTTTTT-GT--GGTAAATTTTT-ATCTG-CATTGATGTTCAA-AGAAGAAGGGG--ATGCATGGGGTTTCC-AATCCCCAGTG-CGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGC--CATTCTAGCATGG-TGATAACAAGTTATCA-TAATAAACT-AAAAA---T-GC-AGGAATTCAGAAATT---ATAATTCTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAG-TTTTCA--CGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCAC-AACTGTCCTAGAGTTGGAAATTGA--GAAAATTCGTTTCCT-------TTACACAAGCTGCATAAAGACAAAT-CAACT-AGGCGAAA-CG-TGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----GGAGAGAGAAGAATG-GAAAACTT--AA-TTAACAAGTTA--TGCACGTACATGTACCGTA------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACACTGCAC-TTGAC--ATTTTATAAAGCATTAATAA--AAATGATTTGCCCGTAAA-CAAATATTTGACTCATTTTTGT----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCACTTG---AA-CGTCAAGT-ACT-TTGATCGCAGGGGATATGT-ACAT
gi|10 : CGAATCCATTTGAAATTCTT--TAACA-TA-------AA--C-TTGAGGTCAAA-TATTGAAA--TAAAAT-AAATAATTAG--TTTGAT-CCAGCTATTTTGAAAAAAAGAGGGGGGGGG-GGCAGATTGCGCTAGATCATATCCAACGAA-TCGCTAAAAATCGCTCAGCTTTTAATCTTAT-ATCCACTAT-GATCAA--TTA----TTTTTATC-AACATTTTT-CGTGGG-TAAATTTTCAAGCTGCTA-TGATGTTCAAGAGGA
gi|11 : TGACGGCTTT-TAAATTAA-ACAGG-C-ATGCAATTAAGA-TAATTATAATCTATT-TTATAG------GTAAAATTCGATCTT-TGAAAGTTCCCAGTCTGTT------TTC-TATAATAC-AT--G-CGTA----AAATAAA-TT-C--C--T---GG--GCAGTACTTCTT-TAATAAT---------------AT-A--G-AGTGCTGCA--CGCGATGCAAGCATAATTTTTATATGAATTCCAAT-TA--TCAGATATGA--------TAACCAGTA--ATGC-TGGTGA---ATAAa
gi|12 : A-TCTTTGAT-GTGTATCTTCAGATCGCA-GGCACAC-GCAC-TTGAC--GTTTTA---AGCATTAATAATAAAAAAAAATGCCTGTAAA-CAAATATTTGACTGTTTTTT-TGTTTTGTTTTTGTTT-ACGGGAGGATTTCTAAAAA------AT----CAAATGTATT-TCA---A---AACCGT-AATC-ACC-TTGATCGCAGGGGATATGTAACAT
gi|13 : GGTAA---ATGAGGACAAGTACCATACTGAGGT-A-TATT--TC-TGGTCAGAGATACAAGTTACACAAA------GTCAGAGGAT-GAAAACAA---AGAGG-------G-GAAAAAGAT-G-----TA-CTC-CTAAAAT--CACG-GAAGC-CAGACTAAATCATT-TATCGTTA-T---GGT-C-ACCATACAATGATAAT--TCCGA--GTGACTTCCCAAAGTTTCA-Taggcgtagcactga
gi|15 : TT-CTTGC-TTA--T-ACAGGTTGTCGTTC---GTG-ACGGACGG-----TAT-----------GATAATA-T---GA-AGG--TGGGGACGC-ATATAAATGGGTTAAACATAACGGATGGCAACGAT---ATGACTACT-ACCCAGTGCTCGG-TTAAAAT-CTAACCGG--------TT-------CGGTTAGCC-AGGCTCTTAGgc
gi|16 : CAG-GCAC-TTGACCCGTTTT-TAAA-TATTGATAA--AAATCCTT--CCCATAAA-CAAA-ATT-AATTTATTTTT-T----------TGTTTAACGGGAGATTTTTT-----TTTTTTATTTGACAA---TATT-AAA---A---AATCGTCAAGT-GCC-T
gi|17 : AGAACTTTAGT-GCTGTCCGAAAT-TAT-TTTCTCCAC--CACAGG-AA-GCCTTGTA---CA-CAAACACCGAAGCTTTTTGAATTTCTT--GAACA-TA-------AA--C-TTCAAGCCAAA-TATTGAAA--TAgtg
gi|18 : ttATGAAATAAGAAA---T-GC-AGCAATTCAGAATTTTAAAAAATTAT---CGATCAACTGGTGAACT--GAATTTACG--ACTAATCGGTTA------------------CAAAATTTTTCAT-CGA-CTGTCtgag
gi|19 : aaactaaaCCTTCCA--ATGACAATTGTGTGT----TATTAGTTTACAAG-----GAAT----AGAACCCG--TAAG--CTGTGCGAA---------------TCCT---GTATTACATGTAT-ATACAATA-AAA----
gi|2 : GGCTG-TATAAAGGGATTGG-CGTA----AAATAAAACTACAGC--TTTAGG--ACAGTATTACCCCTGATAATCTTGCGAGT-TTTGCAT-AAAG-AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATA-AATTCCCA-ACGC--------T-ACCATTATGATTCTTGTAAA---ATAAC--CAATTA--ATACACATGT-AACATT---C-TGGTCAGAGATATACGTCACACAAA------GTCAGAGAATTGAAAATGA---GGAGG-------C-G-----GAT-G---TATA-CGC-CTAAATT--CATG-GAGAT-CAGGCTAAATAATG-TATCTTCA-TTTTGATTA-AC--CAT-ATGTT--TTTCCTGG--GTGACTTTCCAACATT-------------ACTTTAGATTGGGAAAG-AAAT-GAAAT-TTTCATCATCTGAAACTAA-TATTAGCA--TATTTTCT--T-AT-ATGTTCAGACGTACTG-TCATTCT--AAAGTAT----T-ACTTTTCA-------AATTG----------------------------------GAAGAACTCG--TAAG--ACGTAGAAATTTT-----AATTTCTTTT---GTATT-TAT-TATTATACAATA-AAAG---ATATGTTTTCAAAGTTCAATACCAAATCAAATG-T-AGCTGTGTTAC-TGTTGC-ACATGCATCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAG---GAATCTCGGTGATTAAT-CGT-CCAAGTACTTTAGTTGCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAGGAA-TCCTTGAACAGCAACAAACTTCGAATCCATTTGAATTTCTTGTTTACA-TACATGT--AAACT-TTGAGTTCAAA-TAATGAAA--TAAAAT-AA----TTAGGCTTTGATTCCAGCGATT----GAAAAAAAGGGGGG---------------CTAGATCATATCCAACGAAATCGCTTAATAT----------TTA-TCC-ATCA---ACTATTGAAACAACTTAAGACTTTTTATTGAATATTTTTTTGTGGGGTAAATTTCTA-TCTGCCATTGATGTTCAAGAGGAAAAGGGGCAGTGCATGGG-TTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCT-AAATGGAATG---GCAGCATTCTAGCATGGTTGATAACAAGTTATCATTTATAAACTAAAAAA---TTGCGAGGAATTCAGAAATT---ATAATTCTGAATGATTAACCGGTGAATTCAGAAGTT--GAAAAAAA------A------------------CAAAGTTTTTCACCGGACCTGTCAT--------------T--------------A-TACTGTTCTGCCGTTCACAAACTTGCATA-AGTT-GAAATTGAAGAAAAATTCGTT-CCT-------TTACAC-AGCTGCAT-AAGACAAATACAACTAAGGCGAAAGCGTTGGATTTCGCGTTTCATCGAAGCAGGGGGGGGGGG-------------AGGATGTG-AAACTT--AATTTAACAAGTTGATTGCACGTACATGTA-CG-GGTATGTTGTTTTCAAATTCTTCAATGGTGT-TTTTCAGATCACAGG-CACAT-GCACTTTGA---ATTTTATAAAGCATTAAT----AAATAATTTGCCCGTAAATCAAATATTTGACTCA-TTTT-T----------TGTTT-ACGGGAGA--TTTT-----TTTTTTAT----CAAATGTATT-TCA---ACTTGA-CGT-AAGT-ACCTTTGATCGCA----GTATGT-ACATta
gi|20 : TT-----TTTTTTAT----CAAATGTATTATCA---A---AC-AGTT-AGTAACC-TTGATCACAAGGGGTATGC-gtaacataggtgaggacttgat
gi|21 : TCGTAATTTCTTGC-ATG--T-ACGAAATGTCGTTCCGAGTG-CGGGACAG-----TATC
gi|3 : ATTCCGGATTTGCGTTATT-CTTGCGTTA--T-ACGAGTTG-CGTTC---GTG-CGGGACGGCTTGATATCCCAAGCTTT-GATG-TA-TTGTCATAA----GGGGACGTTAT------GCATTAAA-ACA-CGGATGGATACGATCATTAGTCCGATTACTGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-AAGT-TGTAACCATT-ATC-AGCTTATTAGT-C-GTACCTCAAACAAATATT-GCACA--C--G-AA---AATTAGGAA---------------G--GAGGCAGA-----GTAT-TTCATAGG-------TATATCATGTACA-CGATA--T-ATC--AAGTGGGT-CTCTTGCAAATTAATAC----C-ATGCATTTACGATTGA-TA-AATTCC-TGTTACAATGCAAGGTAAAATTCGATCTTATGAAAGTCCCTAGGC-GCTGTTAGGCTGATATAAAGCAAT--GACG-A----AAATAAA-CTACAGCAAT--AGGGCACAGTATTACCC-TCATACTC-TGCGAGT-A--G-AT-AA-G-AATGC-GCA--CT--AG----GCAGGATTTTCTCATGAATTTCAAT-TAATTCCCA-GCCAAGCAAGGTT-ACCATTATGAATCTTGGT-A---ATA---CCAATTA--A-AC-CATGT-A--ATTTATC-TG---AGCGATATACGTCACACAA--------TCAGAGAAT-GAAAATAAGAGGGAGG-------GAG-----GATCGAATTATACCGCGCACAAATTGCATGAGAGATACAGGCTAAATAATGATATCTTCGCT---GAT-A-AC----C-ATGTT--C--CTTGGCAGTGACT----A-------A-TCCAG-CATACT--AGCT-GGGAAAGAAAATAGAAAT-TTTCAT--ACTGAA-CTAAAAATTAG-----ATTATTT--TAATAATATTCAGAC-TAC-G-TCAT-CTAAAAAGTAT---ATGACTTTTCAATATGG-AACTTCATCTAAGATATTACTTTGCA-------AAATGTAACGATATCGATTAAGGAACAGACGGAATTTATTTAAATT-CTTTTGTAGTATT-TA--TAT-ATACCATA-AAA----ATATGT----AAAGTTTCA-ACCAAATCAAATGATCAGCCG-G--ACATG--GCAACATGTCATCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCA-------ATAAGAGCAAGCCTCGG-AGTTAATGCGATCCAAGAACTTTAGT-GCGGTCTGAACCATATATTTCTCCACGACG-AAG-AAGTAATTGAACAGCA-CAAACTTCG-ATCCA-TGGAATTTCTT--TTACATTACATGTTAAA--CATTGA--TTAAATTAATGAAAATTAAATT-AA----TTAG--TT---T-CCAGCGATTTTAAGAAAAA
gi|4 : CCGGATTTTCGTAATT-CTTGC-TTAAAT-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA-T---AA------------CGC-AT------G--TTAAATNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN-NNNNNNNNNNNNNNNAGGTTATTAGTACTGTA-CTTAAACAACTATTGTCACA--C--ACAA---AA--AAGAGAGAGAGAGGGGGGGGG--GGGG-GGA-----ATG--TTCAAAGG-------TAT-----GTACA-CGATG--G-TTAAAAAGTTGATTCTCTT-CAAATTAA-AC-TG-CCATACAATTACGA-TGATTATAATCCCTTGTTACAGTGT-AGGTAAACTTCGATCTT-TGAAAGTTCCCT-----------GGCTG-CATAAGGC-AT--G-CGTA----AAATA---------------AGG--ACAGTATTACCC-TGATAATCTTGCGAGTGTG-G-ATGAAGGAAATGCTGCAGCC---AT----GCATGGTTTTCTCATGAATTTCAA-ATAATT-TCA-ATGA--------T-ACTTTAATATCTTTTGGTAAACTATAAGGAC-ATTA--ATTCACATGTGA-CATT--TCTTGGTCAGAAA-ATA------ATGAAGGGTGTGTGTGTGGGG-GGGGGTGG---GGGGGGGGGGGGG-G-----GGG-G---GGTA-CGT-CCTAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-ACAT--T---ATGTT--T--CCTGA--GTGACTTCCCAACATTTCT-CCTGGAAATACTTCGGAT--GAAAAA-AAAT-GAAAGGTTTCACCAACTGAA-CTAAATATAAGCATTTATTTTTC--TTAT-ATGTTCAGACGTAC-ATTCAT-CT--GAAGTATATCATTACTTTTCA--ATGACAATTGTGTGT----TATTAGTTTATATTATATAAAAAG-GAAGAACTCG--TAAG--ATGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-CAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAAAG-TCAGCTGTGTTACATGTTGT-ACA
gi|5 : GATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTGGCGGGACGG-----TATCC-AGGCTTTTGATG-TAAT---AATAAAGATGGGAACAT-AT------GCATTAAAAACAACGGATGGCAACGAT---TAGCCGATTAACTGTGTACTCGGTTTAAAGTGC-AACCGGATAGACAATTTGTACACCGATTAATC-AGGTTATTAGTACAGTA-CTTAAACAAA-ATTGGCACA--C--G-AA---AA-----AG---------------G--GGGG-GTA-----ATAATTTCATAGGTAATGTATAT---ATATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAA-TACG--TGATTA-AATTCCTTGTTACATCGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCA-TTG-TAGGCTG-T
gi|6 : TTCCGGAGTTTCGTAATT-TTTGC-TTA--TTACGATTTGTCGTTC---GTG-CAGGACGG-----TATCCCAAGCTTTTGTTG-TA-----AAT------------GT-GT------GCGTTGAATACAACGGATGACAACGAT---TAGCCTACT----GAGTACTCGGTTTAAAGTGCTAACCTGCTAGACAATTT-GTAACCGATTAATC-AGGTTATTAGTATGG-------------TATTGGCACACCC--A-AA---AA--AAGAG---------------GAAAGGG-GGAGGGGTATA--TTCAAAAG-------TAT---GTATAAA-CGATG--T-ATAAACAGTTCGTGCTTTT-CAAATTAA-AC-TGCC-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCTTGGCAGTTA-TAGGCTG-TATAAAGg
gi|7 : ATAAACTAAAAAAAATC-GC-AGGAATTCAGAA-TT---ATAATTATGAACGATTAACCGGTGAATTCATCAGTT--G--AAAGA------ATTAACAACTAATCAGTTACAAAGTTTTT-A-CTGA-CTGTCAT--------------TCTTTCTGACAAAATATTACTGCTCTGCCGTTCACAAACTGTCCTAGAGTTGGAAATTGA--GAAAATACGTTCC-T-------TTACACAAGCTGCCTAAAGACAAATACAGCT-AG----AA-TGTGGA--TTCGCG-TTCATC-AAGTATAGGGGAAAAACAAAACA-----AAA-ACA---AAACTGGGAA-CTAACAAGTTA--TGCACGTACAT--------------------------CTTTGAT-GTGCATTTTCAGATCGCA-GTCACAC-GCAA-TTGAC--TTTTTATAAA
gi|8 : AAACAAATTCTGTCATA--CATG-AACAGAA--AAGGG---------------G--AGGG-GGA-----GT-----CAAAAA--------AT---TTGTTAATCAATGACTGATCAGA-TTTGATGATCTT-CAAAGTAA-CT-TC-C-ATACAATTGCGA-TAATTAT-ACCTCATGTT----T-C-AAATAAAAC----TCTG-TAAAAATT-CCTGGT------CAGGCTT-TATAATGC-AT--A-TGTAAATTAAATAAA-CTAC--C------GG--GCAGTATTACAC-AGATAA----GAGTGT-T--G-AT-AA-C-AATTCTACA--C----T----GCAa
gi|9 : ------------------CAAAGTTTC-CATC-GA-TTGCCATCCTTTCTGGCTCAAT--------------ATTACT--TCTGCCATTCACAAACTGTCATAGGGTTAGAAATTGG--GGAAATAAGTCCCTTAACTGAGTTACACAAACTGCCTAAAGACA------GCC-AGACGAG--CGTTGA--TTCGCT-TACA---AAGTAGGAATA---------ACA-----AA--ACG---AACCTGGGAA-CCAACAAGTTA--TGCACGTA--TGTA-C--A------TGTGTTGAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-aaca
blockSeqs : T G AA T CGA G CTTGA C T A ATAATAAAGAT G T ATAAAT GG C A CAT T C T G T A AATTTGTACAC A N T C CC ATG CAG TT AGAGAGAGGGGGGGG AA C GGGGTATA T TAATGTATATA T ACTG G T AGG C T T T ATG A A GCTGT A T G TG A AATT A A AGCTTTA GC C CT TTTGC G GGA GC GCGATGCAA TT C T AGCAAGGT A G ACT GA CC T G AC TATC A AGGGTGT TT GAG GGGGGGGGG C AATT C G TA TG A A GA C TTT TA CATACA AAT CA TCTCCTGGAA TT TG A A G C A A C TT TA A G CTG T AA ATCA G ATA C CATCTAAGA C TTATATAAAAAG AT GA T ATTTAA T GTA A TG T . G TTT T A C T T A T A A NNNNNNN AGC GGT G AT A T A A GA C G G C A GT A T CATGTTA ACT GG T T AT . ATAA GC T T T GGGGGCAGATTGC A CGCTCAGCTT A T ATCC T A AGACT TG TT G G AA C T G CA . A A . . AG T T T A AATC G T TAA A G C ACG ATTAACAACTAATCAGTTA CCG C TCTTTCTGACAAAAT T GT A A G G AG T C C AACTGAG A A A A A A G AG T AT T T G AAAAACAAAACAAAAACA GGG T AT C G CGGGTATGT T C T G G G . T CCG AT G AATA T T T T T TGTTTTGTTTT A A AAAAA TTGA A ACTTGA CA A T G A
blockSeqs : . . . . . . . C T . TTGTCATAA G . . CA T N . N T N N T N AATTTGTAAC N . A . . AC . . . . . ATAAT A TATATCA . T . . TGC . . T T GTG . . AGTTA . A A . . . . A AGCAATA . . CT GTGG . AG . TAG TA C . . . A . GA . A . T TCT C A T . GGAAAAA . T . . TA . . . T . . AC CAT TTT . ATCCAGC TC G . . . C . A C . TT . G CAT . . A T A C TGTGT C AGGAAT . . A A . . . T . . . T . . C T T A T . C . . GG . T T . . . . C . . C . . A . CATGT CA AG . T . . . . T . T . . . . . CA . . T C C G . A C . G A TT . A . C G C GAA TCGGTTA TC . CCTTTCTGGCTCAAT T GC A C G A . A C T . A C A A A . A A T . . T . GGGGGAGGATGTG GGG . . C G CA G G . . . T . . G AT G AA T . T T T T . T . . . AAAC A . . A .
blockSeqs : . . . . . . . C T . TGAAGGT A . . CA A A . A N T G N A AAGTTGTAA A . G . . G . . . . . GTAT T TATG . G . . TG . . T T TCG . . TGTT . A . . . . . A CT . . C AG . G . AT TT C . . . A . C . A . C TC C A T . GAG . G . . AC . . . G . . C C C . . . . . . . . . . . . T . . CG . . . . A . TGTGT T AAATGT . . C A . . . T . . . . . . . . . . . . A . . . . . . . . . . T . . C GT . A . . . . . . . A T . . . A . . G A CT . T . . A A . . . A . . . . C . . . . . . T . . . . ACAAAACG T . . . . . . . . . . . . . A A . . . . . . . T . . . . . AAAT A . . . .
blockSeqs : . . . . . . . . . . TAA . . . CG T A . . T T G T C NNNNNNNNN A . . . . G . . . . . ATG A TAT . T . . TA . . T T GTG . . ATTG . G . . . . . . A . . . TG . G . AT AT . . . . A . . . . . . C . . G . CG . . . . CT . . . T . . A T T . . . . . . . . . . . . . . . . . . T . . C . . A . TC . . . . . . T T . . . AAC T . .
blockSeqs : . . . . . . . . . . AAT . . . . . . . . . . . . . TT . . . A . . . . . GT A ATT . T . . TC . . . A G . . . . A . . . . . . C . . . . . C . T . .
blockSeqs : . . . . . . . . . . . . . . T . . . . T
blockSeqs : .
blockSeqCons : TAAAGGT******* GTAT****** GTT*** CA******* G** TT* TC*** GGG************ CT**** AAAG********* **** ******* TC* AAAC****** A*
originalCons : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA-T---AATAAA--TGGGGACGT-AT------GCGTTAAANACAACGGATGGCAACGAT---TAGCCTACTNACCGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-ATTT-TNNACCGATTAATC-AGGTTATTAGTACGGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGA-----ATA--TTCANAGG-------TAT---ATGTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCAGTTG-TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTACAGC--T--AGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AAGG-AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATATAATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATT--TC-TGGTCAGAGATATANGTCACACAAA------GTCAGAGAAT-GAAAATGA---GGAGG-------G-G-----GAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-A-AC--TAC-ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTT--TNAT-ATGTTCAGACGTAC-G-TCAT-CT--AAAGTAT---ATGACTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACATT-----AAATGTGAAGAACTCG--TAAG--ACGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGG-GATTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA-TACATGT--AA--C-TTGAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATCGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCCGA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AA-CGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
finalCons : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TATAAAGGT-------GGGGACGT-AT------GCGTTAAANACAACGGATGGCAACGAT---TAGCCTACTNACCGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-ATTT-TNNACCGATTAATC-AGGTTATTAGTACGGTA-CTTAAACAAATATTGGCACA--C--G-AA---AA--AAGAG---------------G--GGGG-GGAGTAT------TTCANAGG-------TAT---ATGTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGA-TGATTATAATCCCTTGTTACAGTGC-AGGTAAAATTCGATCTT-TGAAAGTTCCCTGGCGTT---TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTACCA-------GG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AAG--AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAATT-AATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAA---ATAAGGACAATTA--ATACACATGT-A-CATTTC---TGGTCAGAGATATANGTCACACAAA------GTCAGAGAAT-GAAAATGA---GGAGGGGG------------GAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-A-ACCT----ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCA--TATTTTTT--TNAT-ATGTTCAGACGTAC-G-TCAT-CT--AAAGTAT---ATGACTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACAAAAG---------GAAGAACTCG--TAAG--ACGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGG-GATTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA-TA-------AA--C-TTGAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATCGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATC-GA-CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCAAAAC------CGTA-AGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TGGGGGGGGGGGGGGGGGGGGGCGTACTGCATTGAATTATCTTGTATTCAAACATTAGATATTCCCAGAATGGTCCTCCCACGAAGCTTATACTGATGATAGAATTTCATACAAAAAAACTTGATGGACATATCAACTGAACTATATATTTAAAACTTTT
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 111 11111 333333333333333333333333333333333333333 111 1 22222222222 1 1111 111 33333333333333333333 1111 222222222222222 1111 1111 333333 1 1111 555555555555 222222 1111 222222222 22222222 111 11 11 111 22222222 111 22222222222222 11 111 44444 11111 11 22222222222 11 1 11 1 1 1 11 1111 1 11 1 1 11 2222222 11 1111 55555555555555 11 11 11 222222 111 11 2222 111 1 1 1 5555555 222 111 1 33 1 1 1 11 1 1 1 11 5555555555555555 11 1 2222 11 1 55555555555555 1 5555555555 1 1 22222 11111 11 11 11 11 1 1 1 1 222 11 1 1 22222 1 111 11111 7777777777777777777777777 11 00000000000000000000000000000 11 3333333 1 1 11 1 1 7777777777777777777777 111 1 11 55555555555 2 111 1111 1 444444444444 1 22222 1111 22222222 1 1 1
lowQualScore : 5 5 77 5 000 5 44444 2 3 777777777777777777777777777777777777777 44 7 2 111 0 0 0 4 3 2 2 2 6 77777777777 5 3 0 222 6 6 99 1111 111 99 99999999999999999999 6 4444 3 1 333333333333333 6 0000 66 0 5 5 4444 5 5 8 222 5 5 999999 1 5 1 7 99 6 4444 6 222222222222 99 6 888 222222 6 6666 99 666666666 8 0 5 8 99999999 8 0 0 1 111 55 0 11 0 6 8 11 111 8 8 99999999 1 3 3 0 8 444 00000000000000 8 8 22 11 8 8 0 88 8 444 8 11111 66666 11 0 0 66666666666 66 0 22 0 5 2 0 3 2 33 5555 0 2 22 0 0 33 0000000 11 0 5 4 3 7777 0 55555555555555 11 8 11 11 8 000000 8 444 8 11 8 8 5555 777 0 0 2 3 3 3 3 0 1 4444444 333 888 3 11 1 0 0 0 0 33 2 0 0 2 0 0 0 11 1 4444444444444444 8 8 77 8 1 11 0 1111 33 3 0 3 0 44444444444444 3 8888888888 3 3 77777 7 7 00000 88 99 6 6 44 6 7 6 88 5 5 5 5 111 88 5 5 1 3 22222 0 9 777 1 2 2 77777 8888888888888888888888888 0 0 6 11 88888888888888888888888888888 3 33 3 1 2 6 33 1 6 6 2222222 3 1 3 3 3 0 6 9 0 3 33 0 3 0 99 0 8888888888888888888888 888 0 33 3 2 44444444444 2 2 8 8 0 8 0 8 8 222 11 2 4444 0 3 0 3 3 0 3 444444444444 0 9 00000 7777 0 8 22222222 3 6 8 8 6 0
lowQualScore : . . .. . ... . ..... . . ....................................... .. . . ... . . . . . . . . . ........... . . . ... . . .. .... ... .. .................... . .... . . ............... . .... .. . . . .... . . . ... . . ...... . . . . .. . .... . ............ .. . ... ...... . .... .. ......... . . . . ........ . . . . ... .. . .. . . . .. ... . . ........ . . . . . ... .............. . . .. .. . . . .. . ... . ..... ..... .. . . ........... .. . .. . . . . . . .. .... . . .. . . .. ....... .. . . . . .... . .............. .. . .. .. . ...... . ... . .. . . .... ... . . . . . . . . . ....... ... ... . .. . . . . . .. . . . . . . . .. . ................ . . .. . . .. . .... .. . . . . .............. . .......... . . ..... . . ..... .. .. . . .. . . . .. . . . . ... .. . . . . ..... . . ... . . . ..... ......................... . . . .. ............................. . .. . . . . .. . . . ....... . . . . . . . . . . .. . . . .. . ...................... ... . .. . . ........... . . . . . . . . . ... .. . .... . . . . . . . ............ . . ..... .... . . ........ . . . . . .
lowQualScore : 7 7 99 7 000 7 33333 5 2 222222222222222222222222222222222222222 77 5 5 777 5 8 5 0 2 5 0 5 5 22222222222 0 3 8 222 7 7 22 2222 777 22 55555555555555555555 7 2222 2 0 777777777777777 7 8888 33 7 7 7 6666 7 7 7 666 7 7 666666 4 0 0 7 22 7 2222 7 000000000000 22 7 777 777777 7 7777 22 777777777 0 8 0 0 00000000 0 8 8 7 777 66 8 00 8 0 0 22 888 0 0 00000000 0 2 8 8 0 000 88888888888888 0 0 00 00 0 0 6 66 0 000 0 88888 00000 00 8 8 77777777777 00 0 55 0 0 5 0 2 5 88 5555 0 5 55 0 0 88 2222222 00 8 0 6 2 0000 8 22222222222222 00 0 00 00 2 666666 0 000 0 88 0 0 0000 000 0 0 5 2 2 2 2 0 0 3333333 333 333 3 77 0 0 2 0 0 88 5 0 0 5 0 8 8 00 4 0000000000000000 0 0 00 0 4 00 0 2222 88 2 0 2 2 33333333333333 3 3333333333 3 3 77777 3 3 33333 77 33 7 7 77 7 3 7 00 0 5 5 0 000 00 5 5 0 2 22222 0 8 555 0 5 5 55555 8888888888888888888888888 8 8 8 00 55555555555555555555555555555 2 22 2 0 5 5 88 0 5 5 5555555 2 0 2 2 2 0 5 2 0 2 88 0 2 0 00 2 0000000000000000000000 555 0 88 2 5 55555555555 5 5 0 0 8 0 0 0 0 444 66 5 0000 8 2 0 2 2 2 2 888888888888 0 8 00000 0000 8 0 88888888 2 0 0 0 5 0
consensus : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA----T------AA--AGGTGGGGACGT-AT------GCGTTAAANACAACGGATGGCAACGAT---TAGCCTACTNACCGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-ATTT-TNNACCGATTAATC-AGGTTATTAGTACGGTACTT-AAACAAATATTGGCACA--C--G-AA---AA--AAG-----AG-------------GGGGG-GGAGT-AT-TTCANAGG-------TATAT---GTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGAT-GATTATAATCCCTTGTTACAGTGCA-GGTAAAATTCGATCTT-TGAAAGTTCCCTGGC-GTTG-TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTA---C-----TAGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AA-G--AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAAT-TAATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAAA---TAAGGACAATTA--ATACACATGT-A-CATT--TCT-GGTCAG-AGATA--------TACGTCACACAAAGTCAGAGAAT-GAAAACGA---GGAGGGG----GGAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-AACCAT---ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCAT--ATTTTTT--TNAT-ATGTTCAGACGTAC-GT-CAT-CT--AAAGTATATGA---CTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACATT------AAATGGA--A-GAACTCG--TAAG--ACGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGG-GATTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA--------TACATGT-AAC-TT-GAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATCGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCACCGA--CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AACCGTCAAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
Reference ( family-1930 ) : ATTCCGGATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA----T------AA--AGGTGGGGACGT-AT------GCGTTAAANACAACGGATGGCAACGAT---TAGCCTACTNACCGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-ATTT-TNNACCGATTAATC-AGGTTATTAGTACGGTACTT-AAACAAATATTGGCACA--C--G-AA---AA--AAG-----AG-------------GGGGG-GGAGT-AT-TTCANAGG-------TATAT---GTACA-CGATG--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TG-C-ATGCAATTACGAT-GATTATAATCCCTTGTTACAGTGCA-GGTAAAATTCGATCTT-TGAAAGTTCCCTGGC-GTT--TAGGCTG-TATAANGCGAT--G-CGTA----AAATAAA-CTA---C-----CAGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AA-G--AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAAT-TAATTCCCA-ACGA--------T-ACCATTATGATTCTTGGTAAA---TAAGGACAATTA--ATACACATGT-A-CATT--TCT-GGTCAG-AGATA--------TANGTCACACAAAGTCAGAGAAT-GAAAATGA---GGAGGGG----GGAT-G---TATA-CGC-CNAAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-AACC-T---ATGTT--T--CCCGG--GTGACTTCCCAACATTTCA-TCCGGAAATACTTCAGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCAT--ATTTTTT--TNAT-ATGTTCAGACGTAC-GT-CAT-CT--AAAGTATATGA---CTTTTCA--ATGACAATTGCGTGT----TATTAGTTTACA--------AAA-GGA--A-GAACTCG--TAAG--ACGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-TAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAATG-TCAGCTGTGTTACATGTTGC-ACATGCNTCCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCANNNN---ATAAG---GAATCTCGG-GATTAAT-CG--CCAAGNACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTACA--------TA------AAC-TT-GAGNTCAAA-TAATGAAA--TAAAAT-AA----TTAG--TTTGAT-CCAGCGATTTTGAGAAAAAAAGGGGGGGGG-G------TGCGCTAGATCATATCCAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGACTTTTTATCGAACATTTTTTCGTGGGGTAAATTTTTAATCTGCCATTGATGTTCAAGAGGAGAAGGGGCAGTGCATGGGGTTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGCAGCATTCTAGCATGGTTGATAACAAGTTATCATTNATAAACTAAAAAA---T-GC-AGGAATTCAGAAATT---ATAATTNTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAGTTTTTCATCGA--CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCACAAACTGTCNTAGAGTTGGAAATTGA--GAAAATNCGTTCCCT-------TTACACAAGCTGCNTAAAGACAAATACAGCT-AGGCGAAA-CGTTGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----ACA-----AAGGACG-G-AAACTNGGAA-CTAACAAGTTA--TGCACGTACATGTA-CG-A------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACAC-GCAC-TTGAC--GTTTTATAAAGCATTAATAA--AAATAATTTGCCCGTAAA-CAAATATTTGACTCATTTTT-T----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCA---A---AACCGT-AAGT-ACC-TTGATCGCAGGGGGTATGT-ACAT
gi|1 : ATTCCGGATTTTCGTAACT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTG-CGGGAACG-----TATCCCAAGCTTTTGATG-TA----T------AATAAAATGGGAACAT-AT------GCATTAAANNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN-NNNNNNNNNNNNNNNAGGTTATTAGTACAGTACTT-AAACAAATATTGGCACA--C--G-AA---AA--AAG-----AG-------------GGGGG-GGAAT-AT-T-CATAGG-------TA-AT---ATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAATTACGAT-GATTAAATTCCCTTGTTACAATGCA-GGTAAAATTCAATCTT-TGAAAGTTCCCTGGCAGTTG-TAAGCTA-TATAAGGCG-T--G-CTTA----AAATAAA-CTACAGC-----TAGG--ACAGTATTACCC-TGATAATCTTGCGAGT-T--G-AT-AA-GA-AATGCTGTA--C---AT----GCATGGTTTTCTCATGAATTTCAATATAATTTCCA-ATGA--------T-ACCATTATGATCTTTGGTAAA---TAAGGACAACTA--ATAAACATGT-A-CATT--TTT-GGTCAG-AGATA--------CAAGTCACACAAAGTCAGAGAAA-TAAAATGA---GGA-GGG----AGAT-G---TATA-CGC-CAAAAAT--CATT-GATAT-CAGACTAAATCATT-TATCTTCA-T---GAT-AACTAC---ATGTT--T--CCCGG--GTGACTTCCCAACATTTCACTCCAAAAATACTT-AGAT-GGGAAAG-AAAT-GAAATGTTTCATCAACTGAA-CTAAATATTAGCAT--ATTTTTTTCTGGT-ATGTTCAGACGTA--GT-CAT-CT--AAAGTAT-TGA----TTTTCA--ATGACAATTGTGTAT----TATTAGTTTATATT------AAATTGA--A-GAACTCG--TAAG--ATGTACGAACTTT-----CATT-CTTTT---GTATT-TAC-TAT-ATACAATACAAATTTTATACGTT--CGAAGTTCAA-ACCAAATCCAATG-TCAGCTGTGTTACATGTTGC-ACATGCTTCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---ATAAG---GAATCTC---GATTAAT-CG--TCAAGTACTTTAGT-GCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAG-AA-TCCTTGAACAGCA-CAAACTTCGAATCCATTTGAATTTCTT--TTTCA--------TACATGT-AAC-TT-GAGTTCAAA-TAATGAAA--TAAAATAAA----TTAG--TTTGAT-CCAGCGATTTTGAAAAAAAAAGGGGGGGGGTG------TGTGCTAGATCATATCAAACGAA-TCGCTAAATAT----------TTA-TCC-AT-A---ACTATTGAACAAACTTAAGAC---TTAT-GAACATTTTTT-GT--GGTAAATTTTT-ATCTG-CATTGATGTTCAA-AGAAGAAGGGG--ATGCATGGGGTTTCC-AATCCCCAGTG-CGCCCCCTCCCCTCTTCCCGAGATTCTGAAATGGAATGCATGC--CATTCTAGCATGG-TGATAACAAGTTATCA-TAATAAACT-AAAAA---T-GC-AGGAATTCAGAAATT---ATAATTCTGAACGATTAACCGGTGAATTCAGAAGTT--G--AAAAA------A------------------CAAAG-TTTTCA-CGA--CTGTCAT--------------T--------------ATTACTGTTCTGCCGTTCAC-AACTGTCCTAGAGTTGGAAATTGA--GAAAATTCGTTTCCT-------TTACACAAGCTGCATAAAGACAAAT-CAACT-AGGCGAAA-CG-TGA--TTCGCG-TTCATC-AAGCAGGGGGGGGGGG----GGAGAGAGAAGAATG-GAAAACTT--AA-TTAACAAGTTA--TGCACGTACATGTACCGTA------TGTGTTCAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-G-CACACTGCAC-TTGAC--ATTTTATAAAGCATTAATAA--AAATGATTTGCCCGTAAA-CAAATATTTGACTCATTTTTGT----------TGTTT-ACGGGAGGATTTTT-----TTTTTTAT----CAAATGTATT-TCACTTG---AA-CGTCAAGT-ACT-TTGATCGCAGGGGATATGT-ACAT
gi|10 : CGAATCCATTTGAAATTCTT--TAACA--------TA------AAC-TT-GAGGTCAAA-TATTGAAA--TAAAAT-AAATAATTAG--TTTGAT-CCAGCTATTTTGAAAAAAAGAGGGGGGGGG-GGCAGATTGCGCTAGATCATATCCAACGAA-TCGCTAAAAATCGCTCAGCTTTTAATCTTAT-ATCCACTAT-GATCAA--TTA----TTTTTATC-AACATTTTT-CGTGGG-TAAATTTTCAAGCTGCTA-TGATGTTCAAGAGGA
gi|11 : TGACGGCTTT-TAAATTAA-ACAGG-C-ATGCAATTAAGAT-AATTATAATCTATT-TTATAG------GTAAAATTCGATCTT-TGAAAGTTCCCAGTCTGTT--T----TC-TATAATAC-AT--G-CGTA----AAATAAA-TT----C-----CTGG--GCAGTACTTCTT-TAATAAT---------------AT--A-G--AGTGCTGCA--CGCGATGCAAGCATAATTTTTATATGAATTCCAAT-TA--TCAGATATGA--------TAACCAGTA--ATGC-TGGTGAA---TAAa
gi|12 : A-TCTTTGAT-GTGTATCTTCAGATCGCA-GGCACAC-GCAC-TTGAC--GTTTTA---AGCATTAATAATAAAAAAAAATGCCTGTAAA-CAAATATTTGACTGTTTTTT-TGTTTTGTTTTTGTTT-ACGGGAGGATTTCTAAAAA------AT----CAAATGTATT-TCA---A---AACCGT-AATC-ACC-TTGATCGCAGGGGATATGTAACAT
gi|13 : GGTAAA---TGAGGACAAGTACCATACTGAGGT-A-TATT--TCT-GGTCAG-AGATA--------CAAGTTACACAAAGTCAGAGGAT-GAAAACAA---AGAGGGGAAAAAGAT-G-----TA-CTC-CTAAAAT--CACG-GAAGC-CAGACTAAATCATT-TATCGTTA-T---GGT-CACCATACAATGATAAT--TCCGA--GTGACTTCCCAAAGTTTCA-Taggcgtagcactga
gi|15 : TT-CTTGC-TTA--T-ACAGGTTGTCGTTC---GTG-ACGGACGG-----TAT-----------GATAATA----T------GA--AGGTGGGGACGC-ATATAAATGGGTTAAACATAACGGATGGCAACGAT---ATGACTACT-ACCCAGTGCTCGG-TTAAAAT-CTAACCGG--------TT-------CGGTTAGCC-AGGCTCTTAGgc
gi|16 : CAG-GCAC-TTGACCCGTTTT-TAAA-TATTGATAA--AAATCCTT--CCCATAAA-CAAA-ATT-AATTTATTTTT-T----------TGTTTAACGGGAGATTTTTT-----TTTTTTATTTGACAA---TATT-AAA---A---AATCGTCAAGT-GCC-T
gi|17 : AGAACTTTAGT-GCTGTCCGAAAT-TAT-TTTCTCCAC--CACAGG-AA-GCCTTGTA---CA-CAAACACCGAAGCTTTTTGAATTTCTT--GAACA--------TA------AAC-TT-CAAGCCAAA-TATTGAAA--TAgtg
gi|18 : ttATGAAATAAGAAA---T-GC-AGCAATTCAGAATTTTAAAAAATTAT---CGATCAACTGGTGAACT--GAATTTACG--ACTAATCGGTTA------------------CAAAATTTTTCATCGA--CTGTCtgag
gi|19 : aaactaaa---CCTTCCA--ATGACAATTGTGTGT----TATTAGTTTAC----------AA-GGAATA-GAACCCG--TAAG--CTGTGCGAA---------------TCCT---GTATTACATGTAT-ATACAATA-AAA----
gi|2 : GGCTG-TATAAAGGGATTGG-CGTA----AAATAAAACTA---CAGCTTTAGG--ACAGTATTACCCCTGATAATCTTGCGAGT-TTTGCAT-AAAG--AATGCTGCA--C---AT----GCATGATTTTCTCATGAATTTCAAT-AAATTCCCA-ACGC--------T-ACCATTATGATTCTTGTAAAA---TAAC--CAATTA--ATACACATGT-AACATT---CT-GGTCAG-AGATA--------TACGTCACACAAAGTCAGAGAATTGAAAATGA---GGAGGCG----G-AT-G---TATA-CGC-CTAAATT--CATG-GAGAT-CAGGCTAAATAATG-TATCTTCA-TTTTGATTAACCAT---ATGTT--TTTCCTGG--GTGACTTTCCAACATT-------------ACTTTAGATTGGGAAAG-AAAT-GAAAT-TTTCATCATCTGAAACTAA-TATTAGCAT--ATTTTCT--T-AT-ATGTTCAGACGTACTGT-CATTCT--AAAGTAT-T-A---CTTTTCA--A-------------------ATT--------------------GGA--A-GAACTCG--TAAG--ACGTAGAAATTTT-----AATTTCTTTT---GTATT-TAT-TATTATACAATA-AAAG---ATATGTTTTCAAAGTTCAATACCAAATCAAATG-T-AGCTGTGTTAC-TGTTGC-ACATGCATCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAG---GAATCTCGGTGATTAAT-CGT-CCAAGTACTTTAGTTGCCGTCCGAACC-TAT-TTTCTCCAC--CGCAAGGAA-TCCTTGAACAGCAACAAACTTCGAATCCATTTGAATTTCTTGTTTACA--------TACATGTAAAC-TTTGAGTTCAAA-TAATGAAA--TAAAAT-AA----TTAGGCTTTGATTCCAGCGATT----GAAAAAAAGGGGGG---------------CTAGATCATATCCAACGAAATCGCTTAATAT----------TTA-TCC-ATCA---ACTATTGAAACAACTTAAGACTTTTTATTGAATATTTTTTTGTGGGGTAAATTTCTA-TCTGCCATTGATGTTCAAGAGGAAAAGGGGCAGTGCATGGG-TTTCCAAATCCCCAGTGACGCCCCCTCCCCTCTTCCCGAGATTCT-AAATGGAATG---GCAGCATTCTAGCATGGTTGATAACAAGTTATCATTTATAAACTAAAAAA---TTGCGAGGAATTCAGAAATT---ATAATTCTGAATGATTAACCGGTGAATTCAGAAGTT--GAAAAAAA------A------------------CAAAGTTTTTCACCGGACCTGTCAT--------------T--------------A-TACTGTTCTGCCGTTCACAAACTTGCATA-AGTT-GAAATTGAAGAAAAATTCGTT-CCT-------TTACAC-AGCTGCAT-AAGACAAATACAACTAAGGCGAAAGCGTTGGATTTCGCGTTTCATCGAAGCAGGGGGGGGGGG-------------AGGATGTG-AAACTT--AATTTAACAAGTTGATTGCACGTACATGTA-CG-GGTATGTTGTTTTCAAATTCTTCAATGGTGT-TTTTCAGATCACAGG-CACAT-GCACTTTGA---ATTTTATAAAGCATTAAT----AAATAATTTGCCCGTAAATCAAATATTTGACTCA-TTTT-T----------TGTTT-ACGGGAGA--TTTT-----TTTTTTAT----CAAATGTATT-TCA---ACTTGA-CGT-AAGT-ACCTTTGATCGCA----GTATGT-ACATta
gi|20 : TT-----TTTTTTAT----CAAATGTATTATC----A---AACAGT-TAGTAACC-TTGATCACAAGGGGTATGC-gtaacataggtgaggacttgat
gi|21 : TCGTAATTTCTTGC-ATG--T-ACGAAATGTCGTTCCGAGTG-CGGGACAG-----TATC
gi|3 : ATTCCGGATTTGCGTTATT-CTTGCGTTA--T-ACGAGTTG-CGTTC---GTG-CGGGACGGCTTGATATCCCAAGCTTT-GATG-TA----TTGTCATAA------GGGGACGTTAT------GCATTAAA-ACA-CGGATGGATACGATCATTAGTCCGATTACTGAGTACTCGGTTTAAAGTGCTAACCGGATAGAC-AAGT-TGTAACCATTA-TC-AGCTTATTAGT-CG-TACCTCAAACAAATATTG-CACA--C--G-AA---AATTAGG-----AA-------------GGAGGCAGAGT-AT-TTCATAGG-------TATATCATGTACA-CGATA--T-ATCAA--GTGGGT-CTCTTGCAAATTAATAC----C-ATGCATTTACGATTGAT-A-AATTCCT-GTTACAATGCAAGGTAAAATTCGATCTTATGAAAGTCCCTAGGC-GCTGTTAGGCTGATATAAAGCAAT--GACG-A----AAATAAA-CTA---CAGCAATAGGGCACAGTATTACCC-TCATACTCT-GCGAGT-A--G-AT-AA-G--AATGC-GCA--CT--AG----GCAGGATTTTCTCATGAATTTCAAT-TAATTCCCA-GCCAAGCAAGGTT-ACCATTATGAATCTTGGT-AA---TA---CCAATTA--A-AC-CATGT-A--ATTTATCT-G---AG-CGATA--------TACGTCACACAA--TCAGAGAAT-GAAAATAAGAGGGAGGGA----GGATCGAATTATACCGCGCACAAATTGCATGAGAGATACAGGCTAAATAATGATATCTTCGCT---GAT-AACC-----ATGTT--C--CTTGGCAGTGACT----A-------A-TCCAG-CATACT--AGCT-GGGAAAGAAAATAGAAAT-TTTCAT--ACTGAA-CTAAAAATTAG-----ATTATTT--TAATAATATTCAGAC-TAC-GT-CAT-CTAAAAAGTATATGA---CTTTTCAATATGG-AACTTCATCTAAGATATTACTTTGCA--------AAATGTA--ACGATATCGATTAAGGAACAGACGGAATTTATTTAAATT-CTTTTGTAGTATT-TA--TAT-ATACCATA-AAA----ATATGT----AAAGTTTCA-ACCAAATCAAATGATCAGCCG-G--ACATG--GCAACATGTCATCTCCAAATAATCCGAGATCCCTTACTCTAGCCCGCTTATTATGTGGAGTATCA-------ATAAGAGCAAGCCTCGG-AGTTAATGCGATCCAAGAACTTTAGT-GCGGTCTGAACCATATATTTCTCCACGACG-AAG-AAGTAATTGAACAGCA-CAAACTTCG-ATCCA-TGGAATTTCTT--TTACATTACATGTTA------AACATT-GA--TTAAATTAATGAAAATTAAATT-AA----TTAG--TT---T-CCAGCGATTTTAAGAAAAA
gi|4 : CCGGATTTTCGTAATT-CTTGC-TTAAAT-ACGAGTTGTCGTTC---GTG-CGGGACGG-----TATCCCAAGCTTTTGATG-TA----T------AA-----------CGC-AT------G--TTAAATNNNNNNNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN-NNNNNNNNNNNNNNNAGGTTATTAGTACTGTACTT-AAACAACTATTGTCACA--C--ACAA---AA--AAG-----AGAGAGAGAGGGGGGGGGGG-GGGGA-ATGTTCAAAGG-------TAT-----GTACA-CGATG--G-TTAAAAAGTTGATTCTCTT-CAAATTAA-AC-TG-CCATACAATTACGAT-GATTATAATCCCTTGTTACAGTGTA-GGTAAACTTCGATCTT-TGAAAGTTCCCTGGC-----------TG-CATAAGGC-AT--G-CGTA----AAATAA----------------GG--ACAGTATTACCC-TGATAATCTTGCGAGTGT--GGATGAA-GGAAATGCTGCAGCC---AT----GCATGGTTTTCTCATGAATTTCAAA-TAATTTC-A-ATGA--------T-ACTTTAATATCTTTTGGTAAACTATAAGGACA-TTA--ATTCACATGTGA-CATT--TCTTGGTCAGAAAATAATGAAGGGTGTGT-GTGTGGGG---GGGGGT-GGGGGGGG---GGGGGGG----GGGG-G---GGTA-CGT-CCTAAAT--CATG-GAGAT-CAGACTAAATAATT-TATCTTCA-T---GAT-ACAT-T---ATGTT--T--CCTGA--GTGACTTCCCAACATTTCT-CCTGGAAATACTTCGGAT-GAAAAA--AAAT-GAAAGGTTTCACCAACTGAA-CTAAATATAAGCATTTATTTTTC--TTAT-ATGTTCAGACGTAC-ATTCAT-CT--GAAGTATATCATTACTTTTCA--ATGACAATTGTGTGT----TATTAGTTTATATTATATAAAAA-GGA--A-GAACTCG--TAAG--ATGTACGAACTTT-----AATT-CTTTT---GTATT-TAT-CAT-ATACAATA-AAA----ATACGTT--CAAAGTTCAA-ACCAAATCAAAAG-TCAGCTGTGTTACATGTTGT-ACA
gi|5 : GATTTTCGTAATT-CTTGC-TTA--T-ACGAGTTGTCGTTC---GTGGCGGGACGG-----TATCC-AGGCTTTTGATG-TAATAAT------AA--AGATGGGAACAT-AT------GCATTAAAAACAACGGATGGCAACGAT---TAGCCGATTAACTGTGTACTCGGTTTAAAGTGC-AACCGGATAGACAATTTGTACACCGATTAATC-AGGTTATTAGTACAGTACTT-AAACAAA-ATTGGCACA--C--G-AA---AA----------AG-------------GGGGG-GTAATAAT-TTCATAGGTAATGTATATAT---ATACA-CGATA--T-ATCAAAAGTTGATGCTCTT-CAAATTAA-AC-TA-C-ATGCAA-TACG-T-GATTA-AATTCCTTGTTACATCGCA-GGTAAAATTCGATCTT-TGAAAGTTCCCTGGC-ATTG-TAGGCTG-T
gi|6 : TTCCGGAGTTTCGTAATT-TTTGC-TTA--TTACGATTTGTCGTTC---GTG-CAGGACGG-----TATCCCAAGCTTTTGTTG-------T------AA--ATGTG---------T------GCGTTGAATACAACGGATGACAACGAT---TAGCCTACT----GAGTACTCGGTTTAAAGTGCTAACCTGCTAGACAATTT-GTAACCGATTAATC-AGGTTATTAGTATGG-------------TATTGGCACACCC--A-AA---AA--AAGAGGAAAG-------------GGGGA-GGGGT-ATATTCAAAAG-------TATGT---ATAAA-CGATG--T-ATAAACAGTTCGTGCTTTT-CAAATTAA-AC-TGCC-ATGCAATTACGAT-GATTATAATCCCTTGTTACAGTGCA-GGTAAAATTCGATCTT-TGAAAGTTCCTTGGCAGTTA-TAGGCTG-TATAAAGg
gi|7 : ATAAACTAAAAAAAATC-GC-AGGAATTCAGAA-TT---ATAATTATGAACGATTAACCGGTGAATTCATCAGTT--G--AAAGA------ATTAACAACTAATCAGTTACAAAGTTTTT-ACTGA--CTGTCAT--------------TCTTTCTGACAAAATATTACTGCTCTGCCGTTCACAAACTGTCCTAGAGTTGGAAATTGA--GAAAATACGTTCC-T-------TTACACAAGCTGCCTAAAGACAAATACAGCT-AG----AA-TGTGGA--TTCGCG-TTCATC-AAGTATAGGGGAAAAACAAAACA-----AAA-ACA---AAACTGGGAA-CTAACAAGTTA--TGCACGTACAT--------------------------CTTTGAT-GTGCATTTTCAGATCGCA-GTCACAC-GCAA-TTGAC--TTTTTATAAA
gi|8 : -AAACAAATTCTGTCATA--CATG-AACAGAA--AAG-----GG-------------GAGGG-GGAGT------CAAAAA--------ATTT---GTTAATCAATGACTGATCAGA-TTTGATGATCTT-CAAAGTAA-CT-TC-C-ATACAATTGCGAT-AATTAT-ACCTCATGTT----T-CA-AATAAAAC----TCTG-TAAAAATT-CCTGG----T--CAGGCTT-TATAATGC-AT--A-TGTAAATTAAATAAA-CTA---C-----C-GG--GCAGTATTACAC-AGATAA----GAGTGT-T--G-AT-AA-C--AATTCTACA--C----T----GCAa
gi|9 : ------------------CAAAGTTTC-CATCGA--TTGCCATCCTTTCTGGCTCAAT--------------ATTACT--TCTGCCATTCACAAACTGTCATAGGGTTAGAAATTGG--GGAAATAAGTCCCTTAACTGAGTTACACAAACTGCCTAAAG------ACAGCC-AGACG-AG-CGTTGA--TTCGCT-TACA---AAGTA-----GGAATA----ACA-----AA--AC--G-AACCTGGGAA-CCAACAAGTTA--TGCACGT--ATGTA-C--A------TGTGTTGAAA-TCTTCGAT-GTGTATTTTCAGATCGCA-aaca
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): TGGGGGGGGGGGGGGGGGGGGGCGTACTGCATTGAATTATCTTGTATTCAAACATTAGATATTCCCAGAATGGTCCTCCCACGAAGCTTATACTGATGATAGAATTTCATACAAAAAAACTTGATGGACATATCAACTGAACTATATATTTAAAACTTTT