lowQualScore                  :                                                        11111111111111111111111111                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             222222222222222222222                           1111111111111111111111                                                                                                                                                                                                                                                                                   
lowQualScore                  :                                33      222             22222222222222222222222222      2        2222  1         2222222222222222        222          111      1111                       2222222    111111                            22222                             1                            33333333    11111                                                                       11111111111        44444444444444444444      11111    11111                                                                                     1  2            333333     11              1111111                 111               2222         2222                1111     111   11                                                                      11111111                33333333          444444444444444                1111         1    11             1         555555555     111         1      1           1         1      1     1  1   4         1        111  66666666666666                 2222       66666666666           5555555555555     22222222                    1            1    1               2    4          4        2                           4       000000000000000000000                  1        1111111111111111111111     11      1         1  1                                                                                                                         1      333333               1        22            22222           1                                              1    1       
lowQualScore                  :                    1   55      22      000           3 11111111111111111111111111      2  4     6666  2   666   6666666666666666     0  888   5      000  66  0000 5      5   5          4444444    666666     5      6 6 99   666    77777    66   5  3           4    8    55 666   3  3 7777    1 77777777    22222           3 4   4 99    999999     55 3   3   55   666        55   3  77777777777        00000000000000000000      00000    55555 6  3  0 3 7777 3       3 7777   0  88       0                     4           4     4  4    2  99   111111     11  3    66     7777777 4        4      111 555    7777   0000  4      8888    77          1111 5   333   11 2    5  5 5        6         6     3                        7        11111111     5          66666666          555555555555555   0   8  0     9999   5 0   4    11    0     0  0       3 111111111     777         0 9    0           0 3  2    9      0     0  0   0     3   5        666  11111111111111     8      8    8888    0  44444444444         0 8888888888888     00000000                 3  0    3       3    3  2            3    0     2    0        7       2                   0       888888888888888888888          3       5  2     0000000000000000000000     88      2         3  5               6                1                                        4   7                                       6   3      888888   6           3        22       7    88888           3                              7       2   2   5    5       
lowQualScore                  :                    .   ..      ..      ...           . ..........................      .  .     ....  .   ...   ................     .  ...   .      ...  ..  .... .      .   .          .......    ......     .      . . ..   ...    .....    ..   .  .           .    .    .. ...   .  . ....    . ........    .....           . .   . ..    ......     .. .   .   ..   ...        ..   .  ...........        ....................      .....    ..... .  .  . . .... .       . ....   .  ..       .                     .           .     .  .    .  ..   ......     ..  .    ..     ....... .        .      ... ...    ....   ....  .      ....    ..          .... .   ...   .. .    .  . .        .         .     .                        .        ........     .          ........          ...............   .   .  .     ....   . .   .    ..    .     .  .       . .........     ...         . .    .           . .  .    .      .     .  .   .     .   .        ...  ..............     .      .    ....    .  ...........         . .............     ........                 .  .    .       .    .  .            .    .     .    .        .       .                   .       .....................          .       .  .     ......................     ..      .         .  .               .                .                                        .   .                                       .   .      ......   .           .        ..       .    .....           .                              .       .   .   .    .       
lowQualScore                  :                    5   00      66      555           6 22222222222222222222222222      2  4     0000  5   888   5555555555555555     8  777   9      000  99  6666 0      0   7          1111111    444444     7      7 7 11   111    55555    99   0  9           0    2    00 444   6  6 7777    1 88888888    00000           4 0   0 55    333333     00 6   6   00   444        00   6  33333333333        88888888888888888888      88888    55555 0  0  5 6 7777 6       6 7777   4  66       7                     0           0     3  0    4  55   555555     88  2    11     3333333 4        4      333 333    9999   0000  4      6666    33          8888 0   888   99 3    7  7 7        7         7     3                        5        22222222     7          55555555          222222222222222   8   0  8     8888   0 8   8    00    6     8  0       0 000000000     555         0 0    0           0 0  5    0      0     0  5   0     2   2        222  00000000000000     0      0    0000    6  44444444444         8 6666666666666     22222222                 2  0    2       3    3  5            0    0     5    0        5       5                   0       555555555555555555555          0       5  5     8888888888888888888888     33      0         3  0               7                0                                        7   3                                       0   3      333333   0           3        00       0    22222           3                              3       5   5   5    5       
consensus                     :                  NCCTTG--AGAAAC--ATCTCATTGGTATGGTACAA-A-TA-TAT---A--A---AT-CA-A-ACAACAATAT-ACTAGTGAGTATAAT--AATA----------------TAAAAAGA---AACATGTGAA-A-GA--AT----C-GTGTGA-TCA-AATATGGAGG-AT---NGACA------ACACA-TATGAT-A-TN-TTATG-AGTT-----CTTA--GTC-TCGGTGCCTTTATC-AAAA-CCTT--G---CTA-AA-T----TACATA--AC---GCTTTTTT--GTTTCTTATTGAA-AAA-A--GTTG-----CACAAG--T-TTA-AAC--ATG---GATGGTTG--AGT-GA-----------AATAATAA-NAT--TT----------G-ATGTATGTTTNTCTT-----AAATCAGAA-T----A-ATATGGA-C----ATGACA--ACACAAAGTGGAATTCGTCTTCAATTTCG-TTACAATCACA-TTTCTGACATTTTCTT--TGA-CAACCTTGCT-ATGTTTGA--ATATCT-A-C-CT-TTTCTATC-AACAAG-T-C-A-TGTG---CAGA----CA-TTCTAA-NT-TACT-GAGTATTGTAG--C-A-AAA---TTT--CCGGTA-AA-C-ATTTTCTT-AAATAGTAC-TGAAGATAAAAACTATCAGGGAGATACTTGTATAGATTA-C---A--TTTTG-GAGACCTTTCGAAAAAAGAAAAAGAATG------------C--ATCTCTT-GTATAAAT--A-AATCATTTAACAAT--TGATTACATCTAGAAAGAAATNAT-C-T----TTTTT---CAACATACT-GGTTAT-TCCAAACATAT-CNAAGTCCTCAAGTTC-TGTAG-TAAGTTCCTGACATCGGTTAACCAA--NTG-----TGTAAAA--TCAAT-ATTTTC-TAACA-N-ATGATTATA--CAATGA-TTTCAAAATAC-A--TT-TC-TGTTTCTAAAAGTTT-AACCCAATATTTCAAAATTC-TTTCTTTTCTGA-CCAT-ACNTAAAGGTAATCTTCCCA-ATTCTNGTAATACAATAAACCTTTGGGNTACTCTTTTTGATACGCAT-AATTCTT---TTTACAA-A-TTCT--AAATGTACTTTTNCTATATCTTTNGCAGTACAACNNCC-------------CAAAC--TTCACAACAGTAATTC-AAAACGCTACTTACATATGTATCAAATACATGTAACTTAGTTTCTATATTCAGTGTATTTTCATTACATATTTTCANTATACGAAACATGATTTTTCTTCCCCGTGATGCCAAGATGTTTTGAG-TTCTAG------TAAATTTTCCATTAT-AAAAAAGAT-TAACTCCTAAATAG-T-AAACTATCCAC-TACCTCAATTTGAGCTCCATTATAAGACCATTGATCTTNTGTNCTTAATCTAAAATTGT
Reference ( gi|1 )            :                  GCTTTG--AGAAAC-TATCTCAATTGTATGGTACAA-A-CACTAT--TA--A---ATGCAGAGACAACAA-AT-ACTAGCCGATACAAT--AATA----------------TAAAAAGAG--AACATGTGAA-A-GA--AT----C-GTGTGA-TCA-AATATGGAGG-AT---TGACA------ACACA-TATGAT-A-TA-TTACG-AGTT-----CTTA--GTC-TCAGTGCCTTTATC-AAAA-CCTT--G---CTA-AA-T----TACATA--A----GCTTTTTT--GTTTCTTATTGAA-AAA-A--GTTG-----TACAAG--T-TTA-AAC--ATG---GATGGTTG--AGT-GA-----------AATAATAA-GAT--TT----------T-ATGTATGCTTGTCTT-----AGATTAGAA-T----A-ATATGGA-C----ATGACA--ACACAAAGTGGAATTCATCTTCAATTTCG-TTACAATCACA-TTTCTTAC-TTTTTTT--TGA-CAACGTTGCT-GTGTTTGA--ATATCT-A-C-TT-TTTCTATC-AACAAG-C-C-A-TGTG---CAGA----CA-TTCTAATAT-TACT-GAGTATTGTAG--T-A-AAA---TTT--CTGGTA-AA-C-ATTTTCTT-AAATAGTAC-TGAAGGTAAAAACTATCAGGGAGATACTTGCATAGATTA-C---A--TTTTG-GAGACCTTTCAAAAAAAAAAAAAAAATA------------C--ATCTCTT-GTACAAAT--A-AATCATTTATCAAT--TGATTACATCTAGCAAGAAATTA----T----TTTTT---CAACATACT-GTTTAT-TCCAAACATAT-CAAAGTCCTCAAGTTC-TGTAG-TATGTT-CTGACATCGTTTAACCAA--GTG-----TGT------TCAAT-ATTTTC-TAACA-A-ATGATTATGATCGATGATTTTCAAAATAC-A--TTGTC-TG-TTCTAAACGTTT-AACCCAATATTTCAAAATTC-TTTCTTTTCTGA-CCAT-ACGTAAAGGTAATCTCCCCACATTCTGATAA-ACAATAAAGCTTTGGGGTACTCTTTTTGATACGCATAAATTCTTGTGTTTACAACATTTCTAGAAATGTACTTTTTCTATATCTTTGGCAGTAAAAAAACC-------------CAAAC--TTCACACCAGTAATTC-AACACGCTACTTACATATGTATCAAATACATGTAATTTAGTTTCTATATTCAGTGTATTTTCATTACATATTTTCATTATATGAAACATGATTTTTCTTCCCTGTGATGCCAAGATGTTTCGAG-TTCTAG------TAAGTTTTCCATTAT-AAAAAAGAG-TAACTCCTAAATAACTAAAACTATCCAC-TACCTCAATTTGAGCTCCATTATAAGACCATTGATCTTGTGTGCTTAATCTAAAATTGT
gi|2                          :                   CTTTG--AGAAAC--ATCTCATTGGTCTGGTACAA-A-TA-TAT--AAT-A---AT-CAAA--CAACAT-AT-ACTAGTGGGTA--------------------------TAAAA-----------------------------C-GTGTGA-TCA-AATATGGAGG-AT---GGACA------ACACA-TATGAT-A-TC-TTATG-AGTTT----CTTA--CTC-TCCGTGCCTTTATC-AAAAATCGT--G---TTG-AA-T----TACATA--ATG--GTTTTTTTTTGTTTCTTTTTGAA-AAA-AA-GTTG-----CACAAG--T-TTA-AAC--ATG---GATGGTTG--AGT-GA-----------AATAATAT-GAT--T-------------ATGTATGG--GTTTTTAAAAAAATTAGAA-T----A-ATGTGGA-C----ATGGCA--ACACAAAGTGGAATTCATCTTCAATTTCG-TGACAATCACA-TTTCTGACATTTTCTT--TGA-C-ACCTTGCT-ATGTTTGA--ATATCT-ATC-CT-TCTCTATC-AACAAC-T-C----GTG---TAG-------------------ACT-GAGTATTGTAG--T-A-AAAT--TTT--CTGGTA-AA-C-ATTTTCTT-AAATAGTAC-AGAAGATAAAAACTAGCAGGGAGATAC--------------------TTTTG-GAGACCTTTC-----AATAAAAAGAATG------------C--ATCTCTT-GTATAAAT--A-AATCATTTAACTAT--TGATTACATCTAGCAAGAAATGA----T----TTTTTTCCCAATATACT-GGTTAT-TACAAACATATACAAA-TCCT-AAGTTC-TGTAG-TAAGTTCCTGACATCGGTTAACCAA--TTG-----TGTTGTAAATCAAT-ATTTTC-TAACATATATGAGTATA--CAATGA-TTTCAAAATAC-A---------------A--------AACCCAGTATTTCTAGATTC-TTTCTTTTCTGA-CCAT-ACTTAAAGGTAATCTTCCCA-ATTCTTGTAATACAATAAA-CTTTGGGGTACTCTTTTTGATACGCAT-AATTCTT---------------------ATGTACTTTTGTTATATCTTTTGCAGTACAACCCCC-------------CAAGC--CTCTTATCAGTAATTCAAAAACGCTACATACATATGTATCAAATACATGCAATTTAGTTTCTATATTCAGTGTGTTTTCATTACATAATTTCACTAT-TGGAACATGATTTTTCTTCCCCGTGATGCCAAGATGTTCTGAGTTTCTAG------TAAATTTTCCATTATAAAAAAAGAT-TAACTCCCAATTA
gi|5                          :       tgtttactgaaaCCTTG--AGAAAC--ATCACATTGGTATGGTACAA-A-TA------------------------AACAATAT-ACTAGTGAGTATAAT--AATA----------------TAAAAAGA---AAC--GTGAA-C-GA--AT----C-GTGTGA-TCA-AATATGGAGG-AT---GGACA------ACACA-TATGAT-A-TA-TTATG-AGTT-----CTTA--ATC-TCAGTGCTCTTATCAAAAA-CCTT--G---CT--AA-T----TAAACACTACT--GCTTTTTT--GTTTCTTATTG-A-AAA-A--GTTG-----TAC-AGTTT-TTA-AAC--ATG---GATGGTTG--AGT-GA-----------ATAAATAACGAT--TT----------CGATGTATGTTTTTCTT-----AAATCAGAATT----A-TTATGGATC----ATGACA--ACACAAAGTGGAATTCGTCTTCTATTTCG-TTACAATCACC-ATTCTGACATTCTCTT--TGA-C--C-TTGCT-ATG-TTGA--ATATCT-T-C--C-TTTCTATCAAACAAG-T-C-AGTGTGACCCAGA----CATTTCTAA-AT-TACTAGAGTATTGTCGACC-A-AAAATCTTT--CTGGTACAA-CGATTTCCTTAAAATAGTACTTGAAGAT-AAAACTATCAGGGAAGTACTTGTATAGATTA-C---A--TTTGT-TAGACCTTTC-------GAAAAAGAATG------------C--ATCTCTT-GTATAAAT----AATCATTTAACAGT--TGATTACATCTAGAAAGAAATTA----TGATCTTTTT---CAACATACT-GGTTATCTCCAAACATAT-CCAAGTCCT-AAGTTC-TGTAG-TAAGTTCCTAAC-TCGGTTAACCAATTGTGA----TGTAAA---TCAAT-ATTTTCTTAACA-T-ATTATTATA--CAATGA-TTTCAAAAT---------TC-TGTTTCTAAAAGTTT-AACCCAATAATTCAAAATTC-TTTCTtttcgatagaat
gi|8                          :     tattgtttattgaaCTTTG--AGAAAC--ATCTCATTGGTATGGTACAA-A-TA-TAT--GAT-A---AT-CAAA--CAACAATAT-ACTAGTGAGTATAAT--AATA----------------TAAAAAAA---AACATGTGAA-C-GA--AC----C-GTGTGA-TCA-AATATGGAGG-AT---GAACA------ACACA-TATGAT-A-TA-TTATG-AGTTT----CTTA--ATC-TCGGTGCTTTTATC-AAAAACCTT--G---CTA-AA-T----TACATA--AT---GCTTTTTT--GTTTCTTATTG-A-AAA-A--GTTG-----TACAAG--T-TTA-AAC--ATG---GATGGTTG--AGT-GA-----------AATAATAA-AAT--TT----------G-ATGTATGTTTTCCTT-----AAATCAGAA-T----A-ATATGGA-C----ATGACA--A
gi|16                         :       ttgtttattgaaCCTTGTCAGAAAC--ATTTCA-TGGTATGGTACAA-AACATTAT--CATTA---AT-CA---ACAACAT-AT-GCTAGTTAGTATAAT--AATATTAGATTTTGGTTTATTAAAAAGAGAAAACATGTGAT-A-GATCAT----CTGT-TGAGGCA-AATTAGGAGG-A----TGACA------ACACA-TAT
gi|19                         :          tttattgaaCCTTG--AGAAAC--ATGTCATTGGTATAGTACAA-A----TAT--TT--A---ATAACCAAACAACAATAT-ACTAGTGAGTACAAT--CATA----------------TAAAAAGA---AACATGTGAtga
gi|20                         :      ttgtttattgaaaCCTTC--AGAAAC--ATCTCATTGGTATGATACAA-A----TAT----------ATG-ATAAACAACAATAT-ACTAGTGAGTATAAT--AATA----------------TAAAAAGA---AACAT
gi|21                         :  ttgtattgtttattgaaCCTTG--AGAAAC-ATTCTCAATGGTATGATACAA-A-AA--A---TA--A---ATAATCAAACAACCA-AT-Aa
gi|27                         : tttgtttctttattgaaaCTTTG--AGAAA--TATCTCATTGGTATGGTAtacttggcatgtttgacatcaaa
gi|24                         :    gtttgtttattgaaaCCTTG--AGCAAC--ATCTTA--TGTATGGTACAA-A-
gi|26                         :        gtttattgcaaCCTTG--AGAAAC--ATCTCATTGGTACGATACAA-atctgataatcaaacaacaataactcagtactgaaagaatttaaa
gi|4                          :          tttgtttattgaaa--AGAAACATATC---ATTGT-TGGTACAATA-TATAAT------A---AT-CAAA--CAACAA-ATTACTAAGTGAGA--ATTAAATA----------------TAAAAAGAA--ACCTTTTGAA-A-GA--ATTTTGC-GTGTGA-TCAGAATATTGAGGTGTCTGTGACAGATCTGACTCGTTATGATGA-TGCTTATGAAGTG-----CAT---GTCGTC-GTGCCTTTATC-AGAA-CTTG--G---CTATAA-T----Ttaatatgataatcaa
gi|22                         :            tgtttgttttattgaaccgtgaATTTCATTGGTATGGTACAA-A-TA-TATCATA--ATTGATCCA---ACAATAATGT-ACAAGTGAGTATAAT--GATG----------------TGAAA--------------AA-A-GA--AT----C-GTGTGA-TCgttcatcgatgcgtcatctttttcctttgtctttagcttgtgactaaatcgattacataatttcgtgtttcttattgaaaaaaacgttgcattctattagtcttaaacattgatggttgagtgaaataattatgatttgatgtatgtttttctttaaagtcagaataatatgacatgacatgacacaaagcggaattcatcttcaatttcgtttgcaatcacagtttctgacatttcctttgacaccttgctagtgtttttctatcaacaagttcatgtgcagaccattctaaatgtactgagtgatgtagtacaaaattcggtaaaccatttttagtattgaagataaaaatatcagggagatgcttgtgtagattagcattttttgcgagacctttcaaaaaaaaaaaaaaaaaaaaaagaaaatggccaatctcttggtacatgtagaaataaaagaaatgatgatattattatactttttttcaacatactggtttattccaaacatatccaagttcctaagttcgtgtagttaagttcctgacatcgttaaccaattgtttgatgtaaaatcaataattttttaacaatgattatacaatgattgcaaaatacaagttgtctttttctaagagtttcaacccaatatttaaaaatctttctttctgacccata
gi|17                         :                                                                                                 tttattgAAT--CACG----------------TGAAAAGA---AGCTTGCGAAGA-GA--AT----C-ATGTGA-CCA-AATATAGAGG-AT---CGACA------
gi|14                         :                                       agtttagtttattgaaaccttgagattggtatggtacagttatataataagtgagtataatcacgtgaaaagTA----------------TAAAAAAGA--AACACGTGAA-AAGA--AT----C-GTGTGA-TCA-AATATGGAGG-------GAGG------ACA-------AT-A-TC-TTATA-AGTTT----CTTATAGTC-TCAGTGCCTTTATC-AAAAACCTT--G---CTA-AA-T----TACAAA--AT---GCTTTTTT--GTTTCTTATTCTT-AAA-A--GTTG-----CACAAG--T-TTACAGCCAATGCCTGATAGTTACCATTGGA-----------GAT-GTGA-AAT--TT----------T-Actgaaatata
gi|18                         :                                                                                                                                                                                                                -TATGAT-AATC-TTGTA-AGTTAATTTCTTA--GTC-TCAGTGACTACATC-AAAATCTTT--G---CTA-AA-T----
gi|12                         :                                                                                                                                                  tgtttgtttattgaaaccttaaaagaggtctcattggtatggtataatgatcaaacaacaataaattagcgagA-TTACT-ATTT-----CTTA--ATT-TCATAGCATTAATA-AAAA---TTAAG---CTA-AG-T----TACAGA--ACGAGGCTAT-----GTTTTTAATTGAA-AAC-A--ATTG-----TACAAG--T-TTA-AAC--ATT---GATGGGTT--ATT-GATGGGTTGTTCTAATCATAA-CGT--TT----------G-ATAAATAAACATTTC-----AAGTTATTG-T----ACAT-TGGA-C----AT-ACAT-TTATAAAGTAATATTCAGCTTTAATTTCA-TTACTTGCACA-CTTc
gi|6                          :                                                                                                                                                                                                              gaggtatgacaaattaTACA-AGTT------TTA--GGC-TCGGTACCTTTATT-TAAA-TCTT--G---CTA-AAAT----TTCAAA--T----GTTTTTCT--GTTTCTTATTGAA-ATA-A--ATCG-----AACAAG--T-TT-----------------------AGT-AT-----------ATTAATAT-TGT--TT----------G-GCGTGTATTCGCAGT-----AAATCACAA-T----A-ATAAGGA-C----ATGACA--AAACAGAATGGAATTTGTCCTCAATTTCA-TTAGAATCACA-TTCA--AG-TTTTGTTA-TGATTAA--TTGCC--------A--AT-------C-AT-TTCCTAAG-AAC-AG-C-TGA-CGTG---AAAACG--CA-TGCGAATACATACT-AAATATTGTAG--C-A-CAA---TTT--
gi|9                          :                                                                                                                                                                     gttagtatactgaaaccttgaaaaacgcctcattgatatagtacagttaaataatagtcaagttacaatataccaagtgaaaagaTGCCTTGATT-GGAATCCTT--G---TTA-GA-T----TA-ATA--GC---GCCTT---------CTTATTGAA-AAA-T--GTTG-----CTCAAT--T-TTG-AAG--ATG---GATGTTCG--AGT-GA-----------AATAATAA-TATAGTT----------TGATGTATGTTTTTCGT-----AAGTCAGGA-TTATAA-ACATGGA-C----CTGAAA--GAACAAAATGATATTCGTATCC-ATTTGG-TTAAAATCGTA-TTTCTGACATTTTCTT--TGA--AACCTTGCT-ATATTTGA--GTATTG-G-C-CT-TTTCTACA-AACAGC-T-C-A-T-TG---CAGA----CA-TTCT-AT-T-TACT-CAATATTGTtctcaatacgtttccatcatataaaagat
gi|4                          :                                                                                                                                                                                                                                                        tgatCCTTTGTC-TTTA-GCTT--GTGACTA-AA-TCGATTACATA--A------TTTCGT--GTTTCTTATTGAA-AAA-AACGTTGCATTCTATTAG--TCTTA-AAC--ATT---GATGGTTG--AGT-GA-----------AATAATTATGAT--TT----------G-ATGTATGTTTTTCTTTA---AAGTCAGAA-T----A-ATATG-A-C----ATGACATGACACAAAGCGGAATTCATCTTCAATTTCGTTTGCAATCACAGTTTCTGACATTTCCTT--TGA-C-ACCTTGCTAGTG------------------TT-TTTCTATC-AACAAGTT-C-A-TGTG---CAGAC---CA-TTCTAA-ATGTACT-GAGTGATGTAG--T-ACAAA---ATT--C-GGTA-AACC-ATTTT-------TAGTAT-TGAAGATAAAAA-TATCAGGGAGATGCTTGTGTAGATTAGC---ATTTTTTGCGAGACCTTTCAAAAAAAAAAAAAAAAAAAAAAGAAAATGGCCAATCTCTTGGTACATGTAGA-AATAA---AAGAAA--TGATGATATT---------ATTATACTT----TTTTT---CAACATACTGGTTTAT-TCCAAACATAT-CCAAGTTCCTAAGTTCGTGTAGTTAAGTTCCTGACATCG-TTAACCAA--TTGTTTGATGTAAAA--TCAATAATTTTT-TAAC--A-ATGATTATA--CAATGA-TTGCAAAATAC-AAGTTGTCTTT-TTCTAAGAGTTTCAACCCAATATTTAAAAA-TC-TTTC-TTTCTGACCCAT-Ag
gi|7                          :                    tgtttgttttattgaaccgtgaagaaacatatcattgttggtacaatatataataatcaaacaacaaattactaagtgagaattaaatataaaaagaaaccttttgaaagaattttgcgtgtgatcagaatattgaggtgtctgtgacagatctgactcgttatgatgatgcttatgaagtgcatgtcgtcgtgcctttatcagaacttggctataattgttcatcgatgcgtcatctttttAAG-CCGT--G---CTA-AA-T----TACATA--A-----------T--GTTTCTAAT-GAATAAACA--GTTG-----CACAAG--T-TTA-AAC--ATG---GAAGGTCG--AGT---------------ATAATAT-CTT--TTGATACCAAAGT-ATATAT-TTTG-CGT-----AAACCAG---T----A-ATAAGGG-C----ATGCCA--TTATAAA-----------CTTCAAT-----------------TTTCTGAC-ATTTTCT--TCA-AGACCTTGTA-ATGTTTGAGTATATCG-A-C-CT-----TAAC-AA-AAG-CTC-A-TGCG---ACGA----CG-TTCCAGCTT-TGCA-CAGTGCTGTAG--CAA-AAA---TAT--CTGGCA-AA-C-ATTTTCT
gi|15                         :                                                                                                                                                                                                       aaccttcaggcacaatgtgtttttggtatagttcatttatattataaacaaaatagtagtgcaatcatttgaataaattttgaggatgtacaggcatatatacatgtacatgctTTCTTATTGAA-AAA-A--GTTG-----CACAAG--T-TTA-AAA--ATG---GATGGTTG--AAT-GA-----------AATAATGA------TT----------G-ATGTATGTTTTTCTT-----AAATCAGAA-T----A-ATATGGA-C----ATGGCA--ACAAAAAGTGGAATTCATCTTCAATTTCG-TTACTATCACA-TTTCTGACATTTTCTT--TGA-C-ACCTTGCT-ATGTTTagc
gi|3                          :                                                                                                                                                                                                                                                                                                                                               G-----TACAAG--T-TTA-ATC--ATG---GATGGTTG--AGT-GA-----------AATAATAG-----------------------------TGTCTT-----AAATCAGAA-T----A-ATATGGA-C----ATGACA--ACACAAAGTGGAATTCATCTTCAATTTCG-TTACAATCACA-TTTCTGACATTTTCTT--TGA-CACCG-TGCT-ATGTTTGA--ATATCTAA-C-TT-TTTCTATC-AACAAG-T-C-A-TGTG---CAGA----CA-TTCTAAAGT-TACT-GAGTATTGTAG--T-A-AAC---TTTTACC-GTA-AA-C-ATTTTCTT-AAATGGTAC-TGAAGGTAAAAACTATCAGGGAGATACTTGTATAGATTA-C---A--TTTTG-AAGACCTTTC------AAAAAAAGAATG------------C--ATCTCTT-GTATAAAT--A-AATCATTTAACAAT--TGATTACATCTAGAAAGAAATGATTT-T----TTTTT---CAACATACT-GGTTAT-TCCAAACATAT-CAAAGTCCTCAAGTTC-TGTAG-TATGTTCCTGACATCGTTTAACCAA--GTG-----TGT------TCAAT-ATTTTC-TAACA-T-ATGATTATTA-----AATATTCAAAATACAA--TTCTC-TGTTTCTAAAAATTT-AACCCAATATTTCAAAATTCTTTTCTTTTCTGA-CCATAACGTAAAGGTAATCT-CCCA-ATTCTGATAATACAATAAACTTTTGGGTTACTCTTTTTGATACGCAT-AATTCTT---TTTACAA-A-TTCT--AAATGTACTTTTTCTATATC-TTGGCAGT-----AACCCCCCCCCCCCCCTCAAAC--TTCACAACAATAATCC-AAAGCGCTACTTACATATGTATCAAATACATGTAACTTAGTTTCTATATTCTGTGTATTTTCATCACATATATTCATTATATGAAACATGATTTTTCTTCCCTGTGATGCCAAGATGTTTTGAG-TTCTAG------TAAATTTTCCATTAT-AAAAAAGAT-TAACTCCTAAATAGAT-AAACTATCCACTTACCTCAATTTGAGCTCCATTATAAGACCATTGATCTTTTGTTCTT-ATCT-AAATTGTtat
gi|10                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                             cAGGA-T----A-ATAT----CTCTTATG-TA--ACGTACATTTGAGTTTATATTCAATATCG-TTAAAATCACA-TTTATAAC-ATTTTCT--TTA-AGACCTTGTT-ATGTTTGA--GTATTG-A-C-CCATTTCCATC-AACAGT-T-C-A-AGTG---AAGA----CA-TTCTAAATT-TACT---------CAA--T-A-A-------C--CCGGTA-AA-C-ATTTTCGT-AAATAACAT-GGAAGAGAGAAACTATCAGGTAGACATTTGTATAGATTA-C---
gi|13                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gtttaatcaggagaaaaagaatcctgtgaaaaatttttgTCAC-TATTTTCACTGA-TACC-TTGCT-ATGTTTGA--ATATCT-A-CCTT-TTTCTATC-AACAAG-T-C-A-TGTG---CAGATCGACA-TTCTAAATT-TACT-GAGTATTGTAG--A-A-AAA---TTTT-CTAGTA-AA-C-ATTTTCTT-AAATAGTAC-TGAAGATAGAAACTATCAGGGAGATACTTGTATAGATTA-TTTAA--TTTTG-GAGAC
gi|29                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                gcatgcacacactcaatatactttgaatcttgagtaatGATTA-C---A--TTTTG-GAGACCTTTCAAAAAAAGAAt
gi|25                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATTA-C---A--TTTTG-GAGACCTTTCGAAAAA----AAGAATTA------------T--AGC---C-GT-CAAAT--ATTAT-ATTTCCCAATAATGATGGCAGCTAGAAAt
gi|28                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ------TCAAT-ATTTTC-TAACA--------TA----CAATGA-TTTCAAAATAC-A--
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  tgtaaa-------------CAAACCGTTCACAACAGTAATTC-AAAACGCTACTTACATAT----CAAATACATGTAACTTAGTTTCCATATTCAGTCTATGTTCATTACATATTTTCAATATACGAAACATGATTTTTATTCCCTGTGATGGCAAGATGTTTTGGG-TTCTAGGCCTAATAAATTTTCCATTAT-AAAAAAGAATTAACTCTTAAAT------AGCTATCCAC-TACCTCAATTTGAGCTCCATTATAAGACCA--AATCTT
gi|23                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             aa-TAAGTCC-GAATAACTAAAACTATCCAC-TACCTCAAATTGAGTTCCATTATAAGACCATTGATCTTGTATGCTTAATTTAAAATTG

lowQualScore                  :                                                                                                                                                                                                                                                                                                    333333333333                     1                 2222222222222222                                                              1111     111111                             22222                             1                                111111                                                                          11111111111        2222222      11111111                                                                                                                       22                                                                 1111                                    1111     111                                                                                                    33333333    33333333333                2222222                                                    333                                            1                                         11111    3333333                 1111                              33333                                                   1    1                    1                   1                             1     66666666666666666666                            11       4444444444     11                1                                                                                                                            1      222222               1       1         111      44444           1                                                           
lowQualScore                  :                                                                                                                                                                                                                                                        33      2  2                 33 666666 777  666666666666 2    33   2         1 3               2222222222222222       666 3   88      555  66  9999    4   4   4          8  5555   4 111111 22  4      777 66    55  4  00000    66   4  7           7    3    44 555   3  3 7777 55   44  555555    2            2 3   3 88       555 44  44 3   3   44   555             77777777777        2222222   3  33333333         1    55   7777      3 7777 3       3 7777      77                2            3           3                   33         3       55     8888  555   4     4      8   4    777    8888  4    9999999 4 44  77777          4444  4  222   66  4    5  5 5        5         5                                       4 888888     5          77777777    11111111111     99999      1111111          6   2          99             3       1 8 444     8            8    8            1       3      8     8  1         0            1  66666  6 5555555     6      6    4444         99         6         88888      5   0 0    8                 0  8    0       0    0  1           7     3     11   7        5       1                     3     22222222222222222222           1       7  1     44   22  3333333333     33      3         0                  2                                                         1   55                    2                     0      888888               0       0         444   1  33333           0                              3       1   1   7    7       
lowQualScore                  :                                                                                                                                                                                                                                                        ..      .  .                 .. ...... ...  ............ .    ..   .         . .               ................       ... .   ..      ...  ..  ....    .   .   .          .  ....   . ...... ..  .      ... ..    ..  .  .....    ..   .  .           .    .    .. ...   .  . .... ..   ..  ......    .            . .   . ..       ... ..  .. .   .   ..   ...             ...........        .......   .  ........         .    ..   ....      . .... .       . ....      ..                .            .           .                   ..         .       ..     ....  ...   .     .      .   .    ...    ....  .    ....... . ..  .....          ....  .  ...   ..  .    .  . .        .         .                                       . ......     .          ........    ...........     .....      .......          .   .          ..             .       . . ...     .            .    .            .       .      .     .  .         .            .  .....  . .......     .      .    ....         ..         .         .....      .   . .    .                 .  .    .       .    .  .           .     .     ..   .        .       .                     .     ....................           .       .  .     ..   ..  ..........     ..      .         .                  .                                                         .   ..                    .                     .      ......               .       .         ...   .  .....           .                              .       .   .   .    .       
lowQualScore                  :                                                                                                                                                                                                                                                        77      5  5                 77 888888 333  333333333333 7    99   9         4 1               1111111111111111       444 6   00      222  11  4444    0   0   4          0  8888   0 555555 00  4      111 00    33  4  00000    11   4  2           3    3    66 888   3  3 1111 00   99  777777    3            3 6   6 66       888 66  66 3   3   66   888             33333333333        2222222   6  22222222         0    00   7777      3 1111 3       3 1111      99                5            6           6                   44         6       55     7777  444   0     0      0   0    000    0000  0    1111111 0 88  66666          8888  4  222   11  4    0  0 0        7         7                                       4 777777     0          00000000    77777777777     55555      7777777          7   5          22             0       0 0 888     0            0    0            0       2      0     0  4         8            0  77777  7 2222222     7      7    2222         22         7         77777      6   8 6    0                 8  0    8       0    0  0           3     3     77   3        0       0                     3     33333333333333333333           0       3  0     00   00  8888888888     88      5         0                  5                                                         0   22                    0                     0      888888               0       0         000   0  22222           0                              2       0   0   3    3       
consensus                     :                                                                                                                                                                                                                                                  NCCTTG--AGAAAC-AT-CTCATTGGTATGGTACA--AA----TA-T-AT---A---AT--AT-CAAA--CAA-CAATATACT-A-GTGAGTATAATAATA----------------TAAAAAG---A-AACA-TGTGAA-A-GA--AT----CGTG-TGA-TCA-AATATGGAGG-AT---GGAC-A------ACACA-TATGAT-A-T-NTTATG-AG-TT-----CTTA--GTC-TCGGTGCCTTTATC-AAAA-CCTT--G---CTA-AA-T----T--ACA-TAACG---CTTTTTTGTTTCTTATTGAA-AAA-A--GTTGCAC---A--AG--T-TTA-AAC--ATG---GATGGTTGAGTGA-----------AATAATAA-N-A---TTT-GA--------TGTATGTTTTTCTT--AAA----TCAGAA-T----A-ATATGGA-C----ATGACA--ACACAAAGTGGAATTCGTCTTCAATTTCG-TTACAATCACA-TTTCTGACATTTTCTTTGACAACCTTGCTA-TGTTTGA--ATATCT-A-CC-T-TTT-CTATC-AACAAG-TCA-TGTG---CAGA----CA-TTCT-A--AN-T-T-ACT-G---AGTATTGTAG--C-AA-AA---TTT--CC-GGTA-AA-C-ATTTTCTT-AAATAGTAC-TGAAGATAAAAACTATCAGGGAGATACTTGTATAGATTA-C---A--TTTTG-GAGACCTTTCAAAAAAAAAAAA-----------AGAAT-GC--ATCTCT-------TGTATAAATA-AATCATTTAACAAT--TGATTACATCTAGAAAGAAATTA-T--TTTTTT-TCAACATACTGG-TTAT-TCCAAACATATCCAAGTCCTCAAGTTC-TGTAG-TAAGTTCCTGACATCGGTTAACCAATTG-----TG-T----AAATCAAT-ATTTTC-TAAC--ATATGATTATA--CAATGATTT-CAAAATACA--TTGTCTGTTTCTAAAAGTTT-AACCCAATATTTCAAAATTC-TTTCTTTTCTGA-CCAT-ACGTAAAGGTAATCTTCCCA-ATTCTGATAATACAATAAA-CTTTGGGGTACTCTTTTTGATACGCATAA-TTCTT---TTTACAA-ATT-CTA--AATGTACTTTTTCTATATCTTTGGCAGTA-AACCCCC----------CAAAC--TTCACANCAGTAATTC-AAAACGCTACTTACATATGTATCAAATACATGTAACTTAGTTTCTATATTCAGTGTATTTTCATTACATATTTTCATTATATGAAACATGATTTTTCTTCCCTGTGATGCCAAGATGTTTTGAG-TTCTAG------TAAATTTTCCATTAT-AAAAAAG-ATTAACTCC---TAAATAG-C--AAACTATCCAC-TACCTCAATTTGAGCTCCATTATAAGACCATTGATCTTGTGTGCTTAATCTAAAATTGT
Reference ( family-143 )      :                                                                                                                                                                                                                                                  NCCTTG--AGAAAC-AT-CTCATTGGTATGGTACA--AA----TA-T-AT---A---A---AT-CAAA--CAA-CAATATACT-A-GTGAGTATAATAATA----------------TAAAAAG---A-AACA-TGTGAA-A-GA--AT----CGTG-TGA-TCA-AATATGGAGG-AT---NGAC-A------ACACA-TATGAT-A-T-NTTATG-AG-TT-----CTTA--GTC-TCGGTGCCTTTATC-AAAA-CCTT--G---CTA-AA-T----T--ACA-TAACG---CTTTTTTGTTTCTTATTGAA-AAA-A--GTTGCAC---A--AG--T-TTA-AAC--ATG---GATGGTTGAGTGA-----------AATAATAA-N-A---TTT-GA--------TGTATGTTTNTCTT--AAA----TCAGAA-T----A-ATATGGA-C----ATGACA--ACACAAAGTGGAATTCGTCTTCAATTTCG-TTACAATCACA-TTTCTGACATTTTCTTTGACAACCTTGCTA-TGTTTGA--ATATCT-A-CC-T-TTT-CTATC-AACAAG-TCA-TGTG---CAGA----CA-TTCT-A--AN-T-T-ACT-G---AGTATTGTAG--C-AA-AA---TTT--CC-GGTA-AA-C-ATTTTCTT-AAATAGTAC-TGAAGATAAAAACTATCAGGGAGATACTTGTATAGATTA-C---A--TTTTG-GAGACCTTTCGAAAAAAGAAAA-----------AGAAT-GC--ATCTCT-------TGTATAAATA-AATCATTTAACAAT--TGATTACATCTAGAAAGAAATNA-T--CTTTTT-TCAACATACTGG-TTAT-TCCAAACATATCNAAGTCCTCAAGTTC-TGTAG-TAAGTTCCTGACATCGGTTAACCAANTG-----TG-T--A-AAATCAAT-ATTTTC-TAAC--ANATGATTATA--CAATGATTT-CAAAATACA--TT-TCTGTTTCTAAAAGTTT-AACCCAATATTTCAAAATTC-TTTCTTTTCTGA-CCAT-ACNTAAAGGTAATCTTCCCA-ATTCTNGTAATACAATAAACCTTTGGGNTACTCTTTTTGATACGCATAA-TTCTT---TTTACAA-ATT-CTA--AATGTACTTTTNCTATATCTTTNGCAGTACAACNNCC----------CAAAC--TTCACAACAGTAATTC-AAAACGCTACTTACATATGTATCAAATACATGTAACTTAGTTTCTATATTCAGTGTATTTTCATTACATATTTTCANTATACGAAACATGATTTTTCTTCCCCGTGATGCCAAGATGTTTTGAG-TTCTAG------TAAATTTTCCATTAT-AAAAAAG-ATTAACTCC---TAAATAG-T--AAACTATCCAC-TACCTCAATTTGAGCTCCATTATAAGACCATTGATCTTNTGTNCTTAATCTAAAATTGT
gi|1                          :                                                                                                                                                                                                                                                   CTTTG--AGAAACTAT-CTCAATTGTATGGTACA--AA----CACT-ATT--A---A---ATGCAGAGACAA-CAA-ATACT-A-GCCGATACAATAATA----------------TAAAAAG---AGAACA-TGTGAA-A-GA--AT----CGTG-TGA-TCA-AATATGGAGG-AT---TGAC-A------ACACA-TATGAT-A-T-ATTACG-AG-TT-----CTTA--GTC-TCAGTGCCTTTATC-AAAA-CCTT--G---CTA-AA-T----T--ACA-TAA-G---CTTTTTTGTTTCTTATTGAA-AAA-A--GTTGTAC---A--AG--T-TTA-AAC--ATG---GATGGTTGAGTGA-----------AATAATAA-G-A---TTT-TA--------TGTATGCTTGTCTT--AGA----TTAGAA-T----A-ATATGGA-C----ATGACA--ACACAAAGTGGAATTCATCTTCAATTTCG-TTACAATCACA-TTTCTTAC-TTTTTTTTGACAACGTTGCTG-TGTTTGA--ATATCT-A-CT-T-TTT-CTATC-AACAAG-CCA-TGTG---CAGA----CA-TTCT-A--ATAT-T-ACT-G---AGTATTGTAG--T-AA-AA---TTT--CT-GGTA-AA-C-ATTTTCTT-AAATAGTAC-TGAAGGTAAAAACTATCAGGGAGATACTTGCATAGATTA-C---A--TTTTG-GAGACCTTTCAAAAAAAAAAAA-----------AAAAT-AC--ATCTCT-------TGTACAAATA-AATCATTTATCAAT--TGATTACATCTAGCAAGAAATTA-T----TTTT-TCAACATACTGT-TTAT-TCCAAACATATCAAAGTCCTCAAGTTC-TGTAG-TATGTTC-TGACATCGTTTAACCAAGTG-----TG-T-------TCAAT-ATTTTC-TAAC--AAATGATTATGATCGATGATTTTCAAAATACA--TTGTCTGTT-CTAAACGTTT-AACCCAATATTTCAAAATTC-TTTCTTTTCTGA-CCAT-ACGTAAAGGTAATCTCCCCACATTCTGATAA-ACAATAAAGCTTTGGGGTACTCTTTTTGATACGCATAAATTCTTGTGTTTACAACATTTCTAGAAATGTACTTTTTCTATATCTTTGGCAGTAAAAAAACC----------CAAAC--TTCACACCAGTAATTC-AACACGCTACTTACATATGTATCAAATACATGTAATTTAGTTTCTATATTCAGTGTATTTTCATTACATATTTTCATTATATGAAACATGATTTTTCTTCCCTGTGATGCCAAGATGTTTCGAG-TTCTAG------TAAGTTTTCCATTAT-AAAAAAG-AGTAACTCC---TAAATAA-CTAAAACTATCCAC-TACCTCAATTTGAGCTCCATTATAAGACCATTGATCTTGTGTGCTTAATCTAAAATTGT
gi|10                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    gAGGA-T----A-ATAT----CTCTTATG-TA--ACGTACATTTGAGTTTATATTCAATATCG-TTAAAATCACA-TTTATAACATTTTCTTTAA-GACCTTGTTA-TGTTTGA--GTATTG-A-CC-CATTT-CCATC-AACAGT-TCA-AGTG---AAGA----CA-TTCT-A--AA-T-T-----------TACT------C-AATAA-----C--CC-GGTA-AA-C-ATTTTCGT-AAATAACAT-GGAAGAGAGAAACTATCAGGTAGACATTTGTATAGATTA-C---
gi|11                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gtttaatcaggagaaaaagaatcctgtgaaaaatttttg----------CAAACCGTTCACAACAGTAATTC-AAAACGCTACTTACATAT----CAAATACATGTAACTTAGTTTCCATATTCAGTCTATGTTCATTACATATTTTCAATATACGAAACATGATTTTTATTCCCTGTGATGGCAAGATGTTTTGGG-TTCTAGGCCTAATAAATTTTCCATTAT-AAAAAAGAATTAACTCT---TAAATAG-------CTATCCAC-TACCTCAATTTGAGCTCCATTATAAGACCA--AATCTT
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                                                            aaGAGGTAT----GAC-A------A---A-T-TAAT---T-ACTAT-----TT-----CTTA--ATT-TCATAGCATTAATA-AAAA---TTAAG---CTA-AG-T----T--ACA-GAACG---AGGCTATGTTTTTAATTGAA-AAC-A--ATTGTAC---A--AG--T-TTA-AAC--ATT---GATGGGTTATTGATGGGTTGTTCTAATCATAA-C-G---TTT-GA--------TAAATAAACATTTC--AAG----TTATTG-T----ACAT-TGGA-C----AT-ACAT-TTATAAAGTAATATTCAGCTTTAATTTCA-TTACTTGCACA-CTT
gi|13                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATTTTCACTGATA-CCTTGCTA-TGTTTGA--ATATCT-A-CC-T-TTTTCTATC-AACAAG-TCA-TGTG---CAGATCGACA-TTCT-A--AA-T-TTACT-G---AGTATTGTAG--A-AA-AA---TTT--TCTAGTA-AA-C-ATTTTCTT-AAATAGTAC-TGAAGATAGAAACTATCAGGGAGATACTTGTATAGATTA-TTTAA--TTTTG-GAGAC
gi|14                         :                                                                                                                                                                                                                                                                                                         gcatgcacacactcaatatactttgaatcttgagtaattcactATA-----------------AAAAAG---A-AACA-CGTGAA-AAGA--AT----CGTG-TGA-TCA-AATATGGAGG-GA---GGAC-A------A----------T-A-T-CTTATA-AG-TTT----CTTATAGTC-TCAGTGCCTTTATC-AAAAACCTT--G---CTA-AA-T----T--ACA-AAATG---CTTTTTTGTTTCTTATTCTT-AAA-A--GTTGCAC---A--AG--T-TTACAGCCAATGCCTGATAGTTt
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 tTTCTTATTGAA-AAA-A--GTTGCAC---A--AG--T-TTA-AAA--ATG---GATGGTTGAATGA-----------AATAATGA--------TT-GA--------TGTATGTTTTTCTT--AAA----TCAGAA-T----A-ATATGGA-C----ATGGCA--ACAAAAAGTGGAATTCATCTTCAATTTCG-TTACTATCACA-TTTCTGACATTTTCTTTGAC-ACCTTGCTA-TGTTTaccattggagatgtgaaatttta
gi|16                         :                                                                                                                                                                                                                                                   CCTTGTCAGAAAC-AT-TTCAT-GGTATGGTACA--AAACATTA-TCAT---T---A---AT-CAA---CAA-CA-TATGCT-A-GTTAGTATAATAATATTAGATTTTGGTTTATTAAAAAGAGAA-AACA-TGTGAT-A-GATCAT----C-TGTTGAGGCA-AATTAGGAGG-AT----GAC-A------ACACA-TATtat
gi|17                         :                                                                                                                                                                                                                                          tttattgaaCCTTG--AGA-----------TTGGTATGGTACA--GT----TA-T-AT---A---A------TAAG--TGA---GTATAATCACGTGAAAAGAATCACG----------------TGAAAAG---A-AGCT-TGCGAAGA-GA--AT----CATG-TGA-CCA-AATATAGAGG-AT---CGAC-A------tga
gi|18                         :                                                                                                                                                                                                                                  agtttagtttattgaaaCCTTA--AAAGAG-GT-CTCATTGGTATGGTATA--A-----------T---G---A----T-CAAA--CAA-CAATAAATT-A-GCGAGTATGATAATctgaaatata
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                               tgtttgtttattgaaa-TGA-TCA-AACA---ACA-AT---AAATTA------GCGAG-TATGAT-AAT-CTTGTA-AG-TTAATTTCTTA--GTC-TCAGTGACTACATC-AAAATCTTT--G---CTA-AA-T----cttgtaagttaatttcttagtctcagtgactacatcaaaatctttgctaaatc
gi|19                         :                                                                                                                                                                                                    tgtttgtttattgaaaccttaaaagaggtctcattggtatggtataaCCTTG--AGAAAC-AT-GTCATTGGTATAGTACA--AA----TA-T-TT---A---ATA-AC-CAAA--CAA-CAATATACT-A-GTGAGTACAATCATA----------------TAAAAAG---A-AACA-TGTGAc
gi|2                          :                                                                                                                                                                                                                                      ttgtttattgaaaCTTTG--AGAAAC-AT-CTCATTGGTCTGGTACA--AA----TA-T-AT---A---ATA-AT-CAAA--CAA-CA-TATACT-A-GTGGGTATA-------------------------------------------AA-A-----------CGTG-TGA-TCA-AATATGGAGG-AT---GGAC-A------ACACA-TATGAT-A-T-CTTATG-AG-TTT----CTTA--CTC-TCCGTGCCTTTATC-AAAAATCGT--G---TTG-AA-T----T--ACA-TAATGGTTTTTTTTTGTTTCTTTTTGAA-AAA-AA-GTTGCAC---A--AG--T-TTA-AAC--ATG---GATGGTTGAGTGA-----------AATAATAT-G-A---TT---A--------TGTATGGGTTT-TT--AAAAAAATTAGAA-T----A-ATGTGGA-C----ATGGCA--ACACAAAGTGGAATTCATCTTCAATTTCG-TGACAATCACA-TTTCTGACATTTTCTTTGAC-ACCTTGCTA-TGTTTGA--ATATCT-ATCC-T-TCT-CTATC-AACAAC-TC---GTG---TAG-----------------------ACT-G---AGTATTGTAG--T-AA-AAT--TTT--CT-GGTA-AA-C-ATTTTCTT-AAATAGTAC-AGAAGATAAAAACTAGCAGGGAGATAC--------------------TTTTG-GAGACCTTTC-----AATAAAA-----------AGAAT-GC--ATCTCT-------TGTATAAATA-AATCATTTAACTAT--TGATTACATCTAGCAAGAAATGA-T--TTTTTTCCCAATATACTGG-TTAT-TACAAACATATACAAATCCT-AAGTTC-TGTAG-TAAGTTCCTGACATCGGTTAACCAATTG-----TG-TTGT-AAATCAAT-ATTTTC-TAACATATATGAGTATA--CAATGATTT-CAAAATACA--------------A--------AACCCAGTATTTCTAGATTC-TTTCTTTTCTGA-CCAT-ACTTAAAGGTAATCTTCCCA-ATTCTTGTAATACAATAAA-CTTTGGGGTACTCTTTTTGATACGCATAA-TTCTT---------------------ATGTACTTTTGTTATATCTTTTGCAGTACAACCCCC----------CAAGC--CTCTTATCAGTAATTCAAAAACGCTACATACATATGTATCAAATACATGCAATTTAGTTTCTATATTCAGTGTGTTTTCATTACATAATTTCACTAT-TGGAACATGATTTTTCTTCCCCGTGATGCCAAGATGTTCTGAGTTTCTAG------TAAATTTTCCATTATAAAAAAAG-ATTAACTCC---CAATTA
gi|20                         :                                                                                                                                                                                                                                       tgtttactgaaaCCTTC--AGAAAC-AT-CTCATTGGTATGATACA--AA----TA-T-AT---G---A------TAAA--CAA-CAATATACT-A-GTGAGTATAATAATA----------------TAAAAAG---A-AACA-Ttttcgatagaat
gi|21                         :                                                                                                                                                                                                                                  ttgtattgtttattgaaCCTTG--AGAAAC-ATTCTCAATGGTATGATACA--AA-----A-A-AT---AAATA---AT-CAAA--CAACCAATATACT-a
gi|22                         :                                                                                                                                                                                                                                              tttgtttctttattgaaa-AT-TTCATTGGTATGGTACA--AA----TA-T-ATCATA---ATTGAT-CCAA--CAA-TAATGTACA-A-GTGAGTATAATGATG----------------TGAAAA----------------A-A-GA--AT----CGTG-TGA-TCtggcatgtttgacatcaaa
gi|23                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            tttattgTTAAGTCCGAATAACTA-----AAACTATCCAC-TACCTCAAATTGAGTTCCATTATAAGACCATTGATCTTGTATGCTTAATTTAAAATTG
gi|24                         :                                                                                                                                                                                                                                                 agCCTTG--AGCAAC-AT-CTTAT--GTATGGTACA--AA-----A-T-CT---G---ATA-AT-CAAA--CAA-CAATA-ACTCA-GT-ACTGAAAGAATT----------------TAAA
gi|25                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gtttattgcaaGATTA-C---A--TTTTG-GAGACCTTTCGAA-----AAAA-----------AGAAT--T--ATAGC--------CGT-CAAATATTAT-ATTTCCCAATAATGATGGCAGCTAGAAA
gi|26                         :                                                                                                                                                                                                                                                   CCTTG--AGAAAC-AT-CTCATTGGTACGATACAATAA----TA-TGAT-------A---AT-CAA
gi|27                         :                                                                                                                                                                                                                                     tttgtttattgaaaCTTTG--AGAAAT-AT-CTCATTGGTATGGTA
gi|28                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gtttgtttattgaaa-----TG-T--A-AA-TCAAT-ATTTTC-TAAC--A--------TA--CAATGATTT-CAAAATACA--
gi|29                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GATTA-C---A--TTTTG-GAGACCTTTCAAAAAAAGAA
gi|3                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTAC---A--AG--T-TTA-ATC--ATG---GATGGTTGAGTGA-----------AATAATAG-----------------------------TGTCTT--AAA----TCAGAA-T----A-ATATGGA-C----ATGACA--ACACAAAGTGGAATTCATCTTCAATTTCG-TTACAATCACA-TTTCTGACATTTTCTTTGAC-ACCGTGCTA-TGTTTGA--ATATCTAA-CT-T-TTT-CTATC-AACAAG-TCA-TGTG---CAGA----CA-TTCTAA--AG-T-T-ACT-G---AGTATTGTAG--T-AA-AC---TTTTACC--GTA-AA-C-ATTTTCTT-AAATGGTAC-TGAAGGTAAAAACTATCAGGGAGATACTTGTATAGATTA-C---A--TTTTG-AAGACCTTTC------AAAAAA-----------AGAAT-GC--ATCTCT-------TGTATAAATA-AATCATTTAACAAT--TGATTACATCTAGAAAGAAATGATT--TTTTTT-TCAACATACTGG-TTAT-TCCAAACATATCAAAGTCCTCAAGTTC-TGTAG-TATGTTCCTGACATCGTTTAACCAAGTG-----TG-T-------TCAAT-ATTTTC-TAAC--ATATGATTATT--AAATA--TT-CAAAATACAATTC-TCTGTTTCTAAAAATTT-AACCCAATATTTCAAAATTCTTTTCTTTTCTGA-CCATAACGTAAAGGTAATC-TCCCA-ATTCTGATAATACAATAAACTTTTGGGTTACTCTTTTTGATACGCATAA-TTCTT---TTTACAA-ATT-CTA--AATGTACTTTTTCTATATC-TTGGCAGT--AACCCCCCCCCCCCCCTCAAAC--TTCACAACAATAATCC-AAAGCGCTACTTACATATGTATCAAATACATGTAACTTAGTTTCTATATTCTGTGTATTTTCATCACATATATTCATTATATGAAACATGATTTTTCTTCCCTGTGATGCCAAGATGTTTTGAG-TTCTAG------TAAATTTTCCATTAT-AAAAAAG-ATTAACTCC---TAAATAGAT--AAACTATCCACTTACCTCAATTTGAGCTCCATTATAAGACCATTGATCTTTTGTTCTT-ATCT-AAATTGTt
gi|4                          :                                                                                                                                                                                                                                                       c--AGAAAC-AT-ATCATTG-T-TGGTACA--A-----TA-T-AT---A---ATA-AT-CAAA--CAA-CAAATTACTAA-GTGAGAATTA-AATA----------------TAAAAAG---A-AACCTTTTGAA-A-GA--ATTTTGCGTG-TGA-TCAGAATATTGAGGTGTCTGTGAC-AGATCTGACTCGTTATGATGA-TGCTTATGAAG-TG-----CAT---GTCGTC-GTGCCTTTATC-AGAA-CTTG--G---CTATAA-T----T--
gi|4                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tgtttgttttattgaaccgtgaCCTTTGTC-TTTA-GCTT--GTGACTA-AA-TCGATT--ACA-TAA------TTTCGTGTTTCTTATTGAA-AAA-AACGTTGCATTCTATTAG--TCTTA-AAC--ATT---GATGGTTGAGTGA-----------AATAATTA-TGA---TTT-GA--------TGTATGTTTTTCTTTAAAG----TCAGAA-T----A-ATATG-A-C----ATGACATGACACAAAGCGGAATTCATCTTCAATTTCGTTTGCAATCACAGTTTCTGACATTTCCTTTGAC-ACCTTGCTAGTGT------------------T-TTT-CTATC-AACAAGTTCA-TGTG---CAGAC---CA-TTCT-A--AA-TGT-ACT-G---AGTGATGTAGTAC-AA-AA---TT----C-GGTA-AACC-ATTTT-------TAGTAT-TGAAGATAAAAA-TATCAGGGAGATGCTTGTGTAGATTAGC---ATTTTTTGCGAGACCTTTCAAAAAAAAAAAAAAAAAAAAAAGAAAATGGCCAATCTCTTGGTACATGTAGAAATA-A-------AAGAAA--TGATGATATT---------ATTA-TACTTTTTT-TCAACATACTGGTTTAT-TCCAAACATATCCAAGTTCCTAAGTTCGTGTAGTTAAGTTCCTGACATC-GTTAACCAATTGTTTGATG-T--A-AAATCAATAATTTTT-TAAC--A-ATGATTATA--CAATGATTG-CAAAATACAAGTTGTCTTTTTCTAAGAGTTTCAACCCAATATTTAAAAA-TC-TTTC-TTTCTGACCCAT-Agttcatcgatgcgtcatctttttcctttgtctttagcttgtgactaaatcgattacataatttcgtgtttcttattgaaaaaaacgttgcattctattagtcttaaacattgatggttgagtgaaataattatgatttgatgtatgtttttctttaaagtcagaataatatgacatgacatgacacaaagcggaattcatcttcaatttcgtttgcaatcacagtttctgacatttcctttgacaccttgctagtgtttttctatcaacaagttcatgtgcagaccattctaaatgtactgagtgatgtagtacaaaattcggtaaaccatttttagtattgaagataaaaatatcagggagatgcttgtgtagattagcattttttgcgagacctttcaaaaaaaaaaaaaaaaaaaaaagaaaatggccaatctcttggtacatgtagaaataaaagaaatgatgatattattatactttttttcaacatactggtttattccaaacatatccaagttcctaagttcgtgtagttaagttcctgacatcgttaaccaattgtttgatgtaaaatcaataattttttaacaatgattatacaatgattgcaaaatacaagttgtctttttctaagagtttcaacccaatatttaaaaatctttctttctgacccata
gi|5                          : tgtttgttttattgaaccgtgaagaaacatatcattgttggtacaatatataataatcaaacaacaaattactaagtgagaattaaatataaaaagaaaccttttgaaagaattttgcgtgtgatcagaatattgaggtgtctgtgacagatctgactcgttatgatgatgcttatgaagtgcatgtcgtcgtgcctttatcagaacttggctataattgttcatcgatgcgtcatctttttCCTTG--AGAAAC-AT-CACATTGGTATGGTACA--AA----TA--------------------------AA-CAATATACT-A-GTGAGTATAATAATA----------------TAAAAAG---A-AAC---GTGAA-C-GA--AT----CGTG-TGA-TCA-AATATGGAGG-AT---GGAC-A------ACACA-TATGAT-A-T-ATTATG-AG-TT-----CTTA--ATC-TCAGTGCTCTTATCAAAAA-CCTT--G---CT--AA-T----TAAACACTACTG---CTTTTTTGTTTCTTATTG-A-AAA-A--GTTGTAC------AGTTT-TTA-AAC--ATG---GATGGTTGAGTGA-----------ATAAATAACG-A---TTTCGA--------TGTATGTTTTTCTT--AAA----TCAGAATT----A-TTATGGATC----ATGACA--ACACAAAGTGGAATTCGTCTTCTATTTCG-TTACAATCACC-ATTCTGACATTCTCTTTG---ACCTTGCTA-TG-TTGA--ATATCT-T-CC---TTT-CTATCAAACAAG-TCAGTGTGACCCAGA----CATTTCT-A--AA-T-T-ACTAG---AGTATTGTCGACC-AA-AAATCTTT--CT-GGTACAA-CGATTTCCTTAAAATAGTACTTGAAGAT-AAAACTATCAGGGAAGTACTTGTATAGATTA-C---A--TTTGT-TAGACCTTTC-------GAAAA-----------AGAAT-GC--ATCTCT-------TGTATAAAT--AATCATTTAACAGT--TGATTACATCTAGAAAGAAATTA-TGATCTTTT-TCAACATACTGG-TTATCTCCAAACATATCCAAGTCCT-AAGTTC-TGTAG-TAAGTTCCTAAC-TCGGTTAACCAATTG-----TGAT--GTAAATCAAT-ATTTTCTTAAC--ATATTATTATA--CAATGATTT-CAAAA-------T-TCTGTTTCTAAAAGTTT-AACCCAATAATTCAAAATTC-TTTCT
gi|6                          :                                                                                                                                                                                                                                     tattgtttattgaaCCTTG--AAAAAC-GC-CTCATTGATATAGTACA--GT----TA-A-AT---AAT-A---GT-CAAG--TTA-CAATATACCAA-GTGA
gi|6                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                        gttagtatactgaaaTACA-AG-TT------TTA--GGC-TCGGTACCTTTATT-TAAA-TCTT--G---CTA-AAAT----T--TCA--AATG---TTTTTCTGTTTCTTATTGAA-ATA-A--ATCGAAC---A--AG--T-TTA---------------------GTAT-----------ATTAATAT-T-G---TTT-GG--------CGTGTATTCGCAGT--AAA----TCACAA-T----A-ATAAGGA-C----ATGACA--AAACAGAATGGAATTTGTCCTCAATTTCA-TTAGAATCACA-TT-----CA-----------AGTTTTGTTA-TGATTAA--TTGCCA-A-TCAT-TTC-CTAAG-AACAGC-TGA-CGTG---AAAACG--CA-TGCG-AATAC-A-T-ACT-A---AATATTGTAG--C-AC-AA---TTT--TC-aaagatacaagttttaggctcggtacctttatttaaatcttgctaaaatttcaaatgtttttctgtttcttattgaaataaatcgaacaagtttagtatattaatattgtttggcgtgtattcgcagtaaatcacaataataaggacatgacaaaacagaatggaatttgtcctcaatttcattagaatcacattcaagttttgttatgattaattgccaatcatttcctaagaacagctgacgtgaaaacgcatgcgaatacatactaaatattgtagcacaattttctcaatacgtttccatcatataaaagat
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                           gttagtatactgaaaccttgaaaaacgcctcattgatatagtacagttaaataatagtcaagttacaatataccaagtgaaaagaAAG-CCGT--G---CTA-AA-T----T--ACA-TAA-----------TGTTTCTAAT-GAATAAACA--GTTGCAC---A--AG--T-TTA-AAC--ATG---GAAGGTCGAGT--------------ATAATAT-C-T---TTT-GATACCAAAGTATATATTTTGCGT--AAA----CCAG---T----A-ATAAGGG-C----ATGCCA--TTATAAA-----------CTTCAAT-----------------TTTCTGACATTTTCTTCAA-GACCTTGTAA-TGTTTGAGTATATCG-A-CC-T------TAAC-AA-AAGCTCA-TGCG---ACGA----CG-TTCC-A--GC-T-T---T-GCACAGTGCTGTAG--CAAA-AA---TAT--CT-GGCA-AA-C-ATTTTCTtcaatacgtttccatcatataaaagat
gi|8                          :                                                                                                                                 aaccttcaggcacaatgtgtttttggtatagttcatttatattataaacaaaatagtagtgcaatcatttgaataaattttgaggatgtacaggcatatatacatgtacatgctCTTTG--AGAAAC-AT-CTCATTGGTATGGTACA--AA----TA-T-AT---G---ATA-AT-CAAA--CAA-CAATATACT-A-GTGAGTATAATAATA----------------TAAAAAA---A-AACA-TGTGAA-C-GA--AC----CGTG-TGA-TCA-AATATGGAGG-AT---GAAC-A------ACACA-TATGAT-A-T-ATTATG-AGTTT-----CTTA--ATC-TCGGTGCTTTTATCAAAAA-CCTT--G---CTA-AA-T----T--ACA-TAATG---CTTTTTTGTTTCTTATTG-A-AAA-A--GTTGTAC---A--AG--T-TTA-AAC--ATG---GATGGTTGAGTGA-----------AATAATAA-A-A---TTT-GA--------TGTATGTTTTCCTT--AAA----TCAGAA-T----A-ATATGGA-C----ATGACA--Aagc
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ttgtttattgaaTGCCTTGATT-GGAATCCTT--G---TTA-GA-T----T--A-A-TAGCG---CCTT-------CTTATTGAA-AAA-T--GTTGCTC---A--AT--T-TTG-AAG--ATG---GATGTTCGAGTGA-----------AATAATAA-T-ATAGTTT-GA--------TGTATGTTTTTCGT--AAG----TCAGGA-TTATAA-ACATGGA-C----CTGAAA--GAACAAAATGATATTCGTATCC-ATTTGG-TTAAAATCGTA-TTTCTGACATTTTCTTTGA-AACCTTGCTA-TATTTGA--GTATTG-G-CC-T-TTT-CTACA-AACAGC-TCA-T-TG---CAGA----CA-TTCT----AT-T-T-ACT-C---AATATTGT