lowQualScore : 1111111111111111111111111111111 11111111111111111111111
lowQualScore : 2222 111 4 6666666666666666666666 1 33333 11 111 9999999999999999999999999999999 11 1 1 5555555555555 3333333333 111 11 1 5555555 6666666666666666666666 11 1 11 222222222 2222 33333 33333333 222222 11 1 77777777777777777 22222 11 111 111 1 1 3 333 1 1 3333 1 1111111 777777777777777777777777777777777777777777777777777777777 222 1 111 1 555555555555555555555555555555555555555555555555 111 1 44444 1 222 2 111111 88888888888888888888888888888888888888888 333333333333333 1 44444444444444444444444 1 1 1 11 1 11111 1111 22 222222 111 333333333 3333333333333333 1111 1 11 1 11 1 1 1 11 11111 1 2 2 11 1 1 555555 1 222 777777777777777777777777 22 1 11 1 222222222222 1 222222222 1 2222222 1 11 1 22 33333333 1
lowQualScore : 3 3 66 3 7 3 5555 888 3 0 1 3333333333333333333333 0 1 11111 55 33 999 3333333333333333333333333333333 3 7 11 00 2 8 0 6 4 1 2 5 4444444444444 8888888888 2 666 66 1 8 2222222 3333333333333333333333 0 55 2 8 0 3 33 666666666 1 0000 00000 00000000 4 2 888888 9 77 22 0 2 3 66666666666666666 2 9 2 55555 2 3 22 777 111 0 0 0 2 8 555 0 2 5 4444 0 5555555 333333333333333333333333333333333333333333333333333333333 444 0 0 8 3 44 77 111 0 666666666666666666666666666666666666666666666666 2 555 6 9 7 33333 6 3 111 6 555555 11 99 66666666666666666666666666666666666666666 8 000000000000000 6 3 8 11111111111111111111111 1 0 4 5 6 3 00 1 66666 99 5 5 2222 5 2 88 1 22 4 11 0 111111 3 0 5 66 7 111 5 888 222222222 3333333333333333 888 5 77 2 7 55 1 1 777 2222 2 3 1 00 1 1 7 0 3 3 0 3 3 88 1 3 3 0 7 555 333 00 0 55555 6 6 1 4 0 6 55 0 5 0 0 6 777 0 444444 0 4 6 6 2 333 66 5 555555555555555555555555 11 5 0 5 5 00 0 555555555555 5 5 1 6 4 3 333333333 7 7 33 4 6 6666666 5 2 00 2 1 3 6 1 4 4 33 88888888 9 3 3 0 4 2
lowQualScore : . . .. . . . .... ... . . . ...................... . . ..... .. .. ... ............................... . . .. .. . . . . . . . . ............. .......... . ... .. . . ....... ...................... . .. . . . . .. ......... . .... ..... ........ . . ...... . .. .. . . . ................. . . . ..... . . .. ... ... . . . . . ... . . . .... . ....... ......................................................... ... . . . . .. .. ... . ................................................ . ... . . . ..... . . ... . ...... .. .. ......................................... . ............... . . . ....................... . . . . . . .. . ..... .. . . .... . . .. . .. . .. . ...... . . . .. . ... . ... ......... ................ ... . .. . . .. . . ... .... . . . .. . . . . . . . . . .. . . . . . ... ... .. . ..... . . . . . . .. . . . . . ... . ...... . . . . . ... .. . ........................ .. . . . . .. . ............ . . . . . . ......... . . .. . . ....... . . .. . . . . . . . .. ........ . . . . . .
lowQualScore : 3 3 88 5 3 5 5555 333 5 0 0 7777777777777777777777 8 7 66666 99 66 666 1111111111111111111111111111111 5 8 77 22 2 3 8 0 0 0 0 4 6666666666666 0000000000 8 444 88 4 0 0000000 6666666666666666666666 6 88 0 8 0 2 88 222222222 2 2222 88888 88888888 0 0 888888 0 22 22 0 0 2 88888888888888888 2 0 5 22222 2 2 22 555 000 0 5 0 0 8 000 0 5 0 5555 0 2222222 000000000000000000000000000000000000000000000000000000000 222 2 0 8 2 22 22 000 0 555555555555555555555555555555555555555555555555 0 888 0 7 0 77777 0 3 000 7 555555 44 00 22222222222222222222222222222222222222222 0 666666666666666 0 0 0 88888888888888888888888 8 6 0 0 7 3 22 3 77777 77 7 7 1111 7 6 55 9 66 0 55 1 111111 1 5 0 99 9 000 0 888 888888888 5555555555555555 888 0 99 4 4 88 9 7 888 9999 2 2 5 44 4 8 9 4 7 3 3 7 3 33 3 3 7 5 8 777 777 00 7 00000 7 0 2 0 0 6 44 6 8 0 6 6 222 6 000000 6 8 0 6 8 888 88 4 666666666666666666666666 44 0 6 0 0 66 0 000000000000 0 0 4 6 8 3 222222222 8 7 22 0 7 2222222 3 3 22 8 0 3 7 2 0 0 55 55555555 8 0 0 0 2 5
consensus : AATGACACGAGCGCGTTTTGCAGAAAGCTACG-TTTGGCTGAATTTTTCCT-ACATC--ACGAAGATGGAGAAGACGAATCTGTTGTT-ACCAACAAGAGTAA--TT-TTATGCCCCCCAAAGG--GAAACCGCAAATG-T----A-TAATTTAGATAAATTCGTC-GATACTGTAAAACANTTTCCCGTGGAACACCTT----ACCGA----AAATTA-TA-CAACAAAATAAC-GTTAA-NAAATC-GGAATGGA-TG-TATTGAAAA-T-AGATAAATGACGATNAC--ATCATAAT-AAAGAAGCGGA-TAAAG--GCGG---TG--C-AGTCGTTATAATGGACCGTGAN-TATTATAAAT--CANTGTGTCT------TGCCGTGC-TA-GAGAACAGTANATACT--------ACGAGAAACAGNAA----NCGTATGAC-TC---TAA-A-GAG-GTCTTGCAAAAAACTTGAAAAATACATCGT-CGATGAA-ACGGA-AGTAA-ACTTACAACCAA-GGAAA-CAGATTACCTAC-TCTCG---TTTGANG---TN-------AAAAC---C-------AGTA--ACTTTTATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-A-CAAATGCAAAAA-TTC-GG-A-NTC-A-CATATAT---AA---GT-GTTGA-AATGTCC-AGNTGATCTT--AAAATTAGACCCATTGTCGCGGGACC-ACC-TGCG-AAACCG-ACAGGAATTAGTTNTCTNTTATATTTATTGCT-G--AAACCA--TT-AC-------GTTAAT--AAAGTTNAAAG-TTACATCAGAG-ACA---CGGTAG-ACT-TTCTAAATTCACN-TTCC--A---AATC--AACTCGGAATCCATNTTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-NT-CT-AATA----TC-CCNCATGA-NCTNGGATTAGCCGCCATNGAACATTGGATAGACCG-NTTTCCAAA-TC--TTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANN--NAGT---C-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTCGA---TGAAACTAT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCCGANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTACNGTTCGAGAAANATTCGGACAAAACTTT-G---AAA-CCTTTNTTAAAACAGTCGTGGAAACGTTTTTTN-GACGATTTTTTTATCANTTGGGACAAAGGAGAAGACCAGTTAA--CGAGTTTTTCGAATATTCTTAATTCCGACTAAGTCCTACCATGAAATTTACCATGGAATCCG----------------------ATAGAAATATGCTGTCATTTCTTGACGTCATGGTTATTAAAAAACAAACCGCA--ACATTGTAACAGACGTGTTCTACAAATTGACAGAT-ACCAAGCAATACCTTAT-TNTTTNATCC-TGTCACCCNAAAC-ATACT--AAA-AACAATATTCCATACAATTTGGCAAGA-CGTCTCTGCA-CAA-TAATNTCNGACGCTGAAAT-CCT-C--AATATTCGT-CTCGCGGAATTANAG
Reference ( gi|2 ) : AACGACGCGGACGCATTTTGTAGACGATTACG-ACTAGCT-AATTTTTCTT-G-GTA--AGGAAAATG---ATGACGCATCTATT-TT-GCCAACAAAAGTAA--TT-T-ATGCCCCT--AAGGTAGAAACCATAAATAATTAACATTAATTTAGATAAATTTGTT-AGTACAGTACAATAATTTCCTGTTGAACAACTT----AATGC----AAATTG-TGTCAA--AAACAAT-TTTAA-AAAGTC-GGAATGGAATGCTATTGAAAACTTAAA-AAATGACGATAAC--ATCATAATCAAGGAAGCCGA-TAAAG--GTGG---TG--C-AGTTGTTATAATGGACCGAAAT-TATTGTAAAA--CAATGTGCCT------TTCTATGT-TA-GAGGACAGTAAAAAAA--------AAAAAAAAAAGCAA----ACATATGAT-TC---TAA-A-GAA-GTCATG-AAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAA-AGAAA-CTGATTACCTAC-TCTCG---TTTGATG---TT-------AAAAC---C-------AGTA--TTTTTTATGGC-TTACCCAAAATACATAAAAACCAAGTCATTAACG-A-TAAATGCAAAAA-TTC-CG-A-TTC-ATCATATAT---AA---GT-GTTGA-AA-GCCC-AACAGACCTC--AAAATCAGACCTATAGTTGCGGGACC-ATCATGTG-AAACTC-ACA-GAATTAGTTATCTAATATATGTATTA-T-C--AAACCC--TT-AT-------GTTGAT--AAGGCTCAAAG-TTACATAACAG-ATA---CGATAG-ATT-TTCTAAA--CACTCTTCCCGGAAAAGTC--AACACGGAATCAATTTTAGTGTCA-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AATA----TT-TCACATGA-ACTAGGATTACCCGCCATAGAACATTGGATAGACAG-ATTCCCAAA-TC--TTTTAAACG-ATAGATT-T---CCT------AAAGAATTTG-----ATT-TAAA--AAGT---C-TAAAATTAATCCTAGAGAACAAT-TTTATGCATTTCAA---TGAAATGGT-TTACAGACAAAAGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCCGACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AAGAAAAATTGTACTCTGTTGTTAAGGAAAAGTTCGGACAAAACTTT-G---AAA-CTTCTATTAGAACA-TCATGGACACGCTATTTA-GACGACTTTTTTATCATTTGGGACAAAGGTGAAGATCAACTAAAACAA-TTTTTTGA-TATTCTAAACTCT--CTGAGCCCTACAATGAAATTTACAATGGAATCGG----------------------ATAGAAATCAGCTAGCATTCCTTGACGTGATGGTGATGAAAAAAGAAA--GTA--ACATTGTAACCGATATCTTCTACAAAATAACGGAT-ACCAAGCAATA-CTTAT-TATTTGATTCGTGCCACCCTAAAC-ATACC--AGA-AATAATATTCCATATAATTTAGCAAGA-TGTCTTTGTA-CAA-TAATATCAGACACTACAAT-TAT-C--AATATTAGT-CTCGCGGAATTAGAG
gi|4 : AACGACGCGGACGCATTTTGTAGAAGATTACG-ACTAGCTGAATTTTTCTTAG-ATA--AGGAAAATG---ATGACGCA---A--------CAACAAAAGTAAATTT-T-ATGCCCCCAAAAGGTAGAAAGTTCAAAC------CA-TAATTTAGATAAATTTGTT-AGTACAGTACAACAATTTCCTGTCCAGCAACTTTTAAAATGC----AAATTG-TGTCAG--AAACAAT-TTCAA-TAAGTC-GAAATGGAACGCTATTGAAAACTTTAA-AAATGACGTCAACATATCATAATCAAGGAAGCCGA-TAAAG--GTGG---CG--C-AGTTGTTATAATGGACCTCGAT-TATTATAAAT--CAATGTGCCT------TTCTATGT-TA-GAGGACAGTAAATACT--------ATGGGAAAAGTCAA----ACATATGAT-TC---TAA-A-GAA-GTAATGAAAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAA-AGAAA-CTGAATACCTAC-TCTCG---TTTAATG---TA-------AAAAC---C-------AGTA--ATTTTTATGGC-TTACCCAAAATACATAAAAACCAAGTCATTACAG-A-TAAATGCAAAAATTTC-CG-AGTTCAAACATATATAAAAA---GTGGTTGA-AA-GCCCAAACAGACATC--AAAA
gi|6 : cttttcaaattctaatgaaaatgtggaaaaatgaatgtttgtgcgaggaactaaaatccatagaacgatggataaaatccgataaatggtttcaaagttacgaagcacaatttaaaaaagaacatcaagacaaaaatcccttcataaaatcaggtaaattccagccagacaacataaataggaaggagacaaacaggtaccaacccacggtagaatccaacttaaaccgcagaaaatatccgtcaagccggaaccagacggatgacaatattagacaccagggacgcccacagatccctttccacgagcgaccatacaaacggaacaacaatcggcagggaagtattatcacgcgcaaaaattcttttttaggatatggccccagacaaaacgatattagatagcacaaaatatagaaaaagacctgaaacctgacattaaagttactaatttatatatctaacgaatattaacagaaaatgaaattaatgtacttgaaaaaggacttatattcacccccaccccgcgcataaaaaatacagaggaaattaaaAATGACACGAGCGCGTTT-GCAGA-AACTACG-TTTGGCTGAATTTTTCCT-ACATC--ACGAAGATGGAGAAGACGAATCTGTTGTT-ACCAACAGA-GTAA--TT-TTATGCCCCCC-AAAG--GAAA------ATG--------TAATTTAGATAA-TTCATC-GATACTGTAAAACATTTTCCCGTGGAACACCTT----ACCAA----AAATTA-TA-CAACAAAATAAC-GTTAA-CAAATC-GGAATGGA----TATTGAAAA---AGATAAATAACAAT--C--ATCATAA----AGAAGCGGA-TAA-G--GCAG---TG--CTGGTAGTCGTAATGGACCGTGAG-TATTAACAAATTCATTATGTCT------TGCCGTGC-TACGAGAACAGTACATACT--------ACGAGAAACAGGAA----TCGTATGAC-TC---TAA-AAGAG-GTCTTGCAAAAAACTTGAAAAATACATCAC-TGAT----ACGGA--GTAA-ACTTACAATCAA-GGAAA---AAT--CTTACCTTTTGAGATTTAAAG---TG-------AAAAC---A-------AGTA--ACTTTTATGGT-TTACCAAAAATACATAAAAGTCAAATCATAAACG-A-CAAATGTAAAAA-TTC-GGAA-TCC-A-CATATAT----A---GT-ATTGA-AATGTCC-AGATGATCTT--AAAATTAGACCCATTGTTGCGGGACC-ACC-TGCG-AAACCCAACAGGAATTAGTTCTCTTAGAT-TATATTGCT-G--AAACCA--TTCA----------TCATCCAAAGTTAAAAGTTTACATCAGAG-A-A---CCGTAGAACT-TTCTAAA-------TTC--------ATCATAACTCGGAATCCATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AATAAATCCC-TCA-ATGA-CCTCGGACTA-GCGCCATTGAATATGGGAT-GACCG-TTTTCCTCA-TC--TTTTACACGAAGAGATT-G---TCTA-----AAAGAATTTC-----ATCATATC--AAGT---C-TTAAATTAATGCTTGA-AACAACATTTATGCATTT
gi|1 : aatatagaagaaataaccAATGACACAAGCGGGTTTTGCAAATAGCTACG-TTTGGCTGAAATTTTCTT-A--TATCACGAA---G---AAGACGAATCTGTTGTT-ACAAACAA--GTAA--TTAT-ATGCCCCC--CCCCC-----CCCCGAAGAA---ACGTAAACTTGGATTATTTCATC-AATACTGTA-AACCATTTCCCATGGAGAAACCT----ACCAA----AAATCA-TA-CAAC-AAGTAACGTTTAT-GTA-TC-GGAATGGACTGTCATTGAAAA-TGAAA-AAAAGATAACAGT--ATCATCATAAAAGAAACGGA-TAAAA--GCAGCTCTG--A-AGTTG--A-AATGGACCGTGAA-TATTACAAAT--CATTGTGTCT------TGCAGTGC-TA-GAGAACAGTACATACT--------ACGAGAAACAGGAA----TCGTATGAC-TC---TAA-A-GAA-GTCTTG-CAAAAACTTGAAAAA---ATCAT-CACTGAAAATGAAGAT-AA-ACTAACAACC-A-GGAAA-CATCTTGCCT-----------TTTGAGA---TTTAAAACGAAAAC---C-------AGTA--ACTTTTATATT-TTACCAAAAATACAT-AAAGTCATGTCATAAACG-A-CAAATGCAAAGA-TTT-GG-A-ATC-CTCATA------------T-GTT---------C-AGTTGCTCTT--ATAATTAGAACCATTTTCGCGGGACCTACC-TGCG-AAACTA-ATA-GAATTAGCTACCTCTTAGATTTATTAGT-G--ACGCCA--TT--C-------ATTACC--AGATTTCAGAA-TTACAT--CAG-ATAAACCG-TAA-ACT-TTCTTAT--TTCACTTCCAGAGGAAATT--AACTCGGAATCCATATTAGTCTCA-TTTGATGC-CACGAAC-----CTCTA-TT-CT-AATA----TT-CGTCATAA-ACTCGGACTAGCCACCAATGAATATTGGATGGACTG-TTTTCCCCA-TC--TTTAACTCG-AGATATT-T---CCT------AAAGAATTCG-----TCA-TATC--AAGT---C-TGAAATTAAT-CTAGAAAATAAC-ATCATGTATTTTGA---TGAAACTAT-TTACAGACAGAAGCTTGAC-ACTGTCATGTGAACCAAAGTTGCTCCAA
gi|5 : aatatagaagaaataaccAATGACACGAGCGCGTTT-GCAGAAAGCTACGTATTGGCTGAATTTTTCCT-ACATC--ACGAAGATGGAGAAGACGAATCTGTTGTT-ACCAATATGA-TAA--TT-TTATGCCCCCCAAAGG-----ACGA--AATGGTTAA-----ATTTAGATAATTTCATC-GATACTGTAAAACATTTTCCCGTGGAACACCTT----A---CCAAAAAATTA-TA-CAACAAAATAAC-GTTAA-CAAATCCGGAATGG-----T-TTGAAAA---AGATAAAT-AC-ATCA---ATCATCAT-AAAGAAGCGGAATATAGCAGTGC---TGGCT-AGTCGGTA-GATGGACCGTGGTGTATT-TAA----CAATATATCTTAGGTGTGCCGTGCCTC-GAGAACAG-AATTACATTACCGGTAGAAACCACAGCGAGAGTACGT-TGACCTCATATAACA-GAGTGTCTTGCAAAAAACTTGAAAAATACATTGTCCAATGAA-ACGGG-AGTAACACTTACAATCAAGAGAAATCAGA--ATCTAC-ACTCT---CTTGA-GAATTT-------AAAGCGAACAACAAGGAGTAACTTTTCTATTGCGTTTCCAAAAATACATAAAAGTCAAATCA-TAACGTACTAAAGTTAAAAA-TTCGAG-A-ATC-A-CACCTAT---AATATGT-ATTGACAATGTCC-AGATGATCTTAAAAAATTAGCCCAATTGTTGCGGGACC-CACCTGCGAAAACCG-ACAGGAATTAGTTCTCAATTATAATTATTG-TGCTGAAACCCATTC-ATCACCAAAGT--AT--AA-----AAAG-TTACAT--CAGAACAC--CGTTAGTACTGTTCTAAATTCACT-----------------AACTCGGAATCTCATATAGTCTCATTTTGATGTGCACGAAC-----CTCTATCT-CT-AATT----CTATCGCCTAAGACCGGGATGA-GCGCCATTGA--ATTGATTAGACCGTTTTCCTACATTC--TTTTACACGAAGAGATTGT---TCTGATATAAGAGAATTTGCACTCATC-TATC--AAGT---CTTAAAATTAATTGTTGGAAACAAG-CTT---CATTGCAA---Tgagaaattatctacagttcgagaaacatttggacaagactctgaaaactttttgaaacaatcgttgaactttttttttgacgattgttttatcatttgggccagaggagaggaccaattaatggagtttttcaatattcttaatacgctaagtcctaccatgaaattcaccatgggatccaatagaaatatgttgtcatttcttgatgtcatggttattaaatgagagtaccgcatagtaacagacgtgttctgcaaattaacagataccagacaataccttatgcttcattactgttacccttaagatgctacaatagtccatacaatttggcaaaacgtctatgcacaatcttttcttatgctgaaatcctcaaaagtcgcttagcaaaattacagaatgcattattacaacgacgttaccaagtgcaattaattaaaaacggtttcaacaaagctaaatcccaggatagaaaggttcttcaagtaaaatccaaacctcgtca
gi|19 : aatatagaagaaataaccAATGACACGAGCGCGTTTTGCAGAAAGCTACG-TTTGGCTGAATTTTTCCA-C-ATC--ACGAAGATGGAGAAGACGAATCTGTTGTT-ACCAATCAGAGTAA--TT-TTATGCCCCCC-AAAG--GA---CGCAAATGGT----A--AATTTAGAT-AATTCATCGACTACTGTAAAACATTTTCCCGTGGAACACCTT----ACCAA----AAATTACTACAAA--AAATAAC-GTTAACAAATCC-GGAATGG--T----TTGAAAA---AGA-TAAT-AC-ATCA---ATCATAAT
gi|25 : aatatagaagaaataaccAATGACACGAGCGCGTTTTGCAGAAAGCTACG-TTTGGCTGAATTTTTCCT-ACATC--ACGAAGATGGAGAAGACGAATCTGTTGTT-ACCAATAAGAGTAAT-TT-T-ATGCCCCCCAAAGGACGAAA-TGTAAAT--TTAG-A-TAATTTa
gi|29 : aatatagaagaaataaccTCTATT-GTAGCCAACAAAAGTAA--TTGT-ATGCCCCCTAAAGGTGGAAACCA--------------TAATTTAGATAAATTTGTC-AGTACAGTACAACAATTTCCTGTCAAACAcatcg
gi|7 : GTTGT-TATTAGATG-ATTA-T-T--AAATCT--TT-AA-------GTTGAT--AAGGTTCAAAG-TTACATAAGAG-ATA---CGGTAT-ATT-TTCTAAA--CACAATTCCCAAAACAGTC--AACACAGAATCAATTTTAGTTTTG-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AATA----TC-CCACATGG-ACTAGGATTAGACGCCATAGAACATTTGATAGATAG-ATTTCCAAA-TC--TTTTAAATG-ATAGCTT-T---CCC------ATAGAATTTG------TT-TTAG--AAGT---C-TAAAATTAAACCTAGAAAACAAT-TTTATGCATTCCAA---TGAAATGCT-TTATAGACAAAGGTTAGGT-ACTGAGATCGCAACTAAAGTTGCGCCGATTTATG-CTACACTCGTTGT--AGGATTTTTAG-AAAAAAAATT-TACTCTGTTTTCAAGGAAAAGTTTGGACAAAAC--T-G---AAA-CTTTTATTAGAACA-TCATGGAAACGCAATTTT-GACATCTTTGTTATCAATTGGGACAAAGGTGAAAATCAACTCAAATAT-CTGTTGGG-TATTCCAAATTCT--CTGAGCCCTACAATGATATTTACAATGGAATCGG----------------------ATAGAAATC----AGCATTCCTTGACGTTATGGTGATGCAAAAACAAA--GTA--ACATTGTAAGCTATATCTTCTACATAATAACCGAT-ACCAAGAAATA-C---T-TATTTCATTTGTGCCGCTCTAAAC-ATACC--AGA-AATAATATTCCATAAAACTTAGCAAGG-CGTCGTTTTA-CAA-AAATATCAGACACTA-AAT-T-T-CTAAATATTAGT-CTTGCGGAATTA
gi|24 : TATATTTATTGCT-G--AAACCA--TT--C-------ATCACC--AAAGTTAAAAG-TTACATCAGAG-ACA---CCGTAG-ACT-TTCTAAATTCACT-----------------AACTCGGAATCCATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AATA----TC-CCTCAAGA-CCTCGGACTAGCCGCCATTGAATATTGGtaaaaattacttctgcaaagaagctaccttaactaagaaag
gi|20 : ctTTGAGTCTTA-ATTGATGC-CACAAACACCAATCCTA-ATACT-AGTA----TT-TCTCATAA-TCTAGAATTAGCCGCCATAGAATAATGGATATGCTG-ATTTCCTAA-TC--TTCAACACG-TGAGATT-TTCACCT----------CATTTG-------T-TACATCGGGT---G-TACAATTAATCTTGGAAAACAAT-TTT---------AA---TGAAAATGT-TCACAAACGAATGCTGGCC-ACTGCGATAGGAACAAAA
gi|22 : acaggattagccaTA-AT-CTGAATT----TT-CCATATGA-TATAG-ATTAGTCACCGTAGATCATTGCGTAAA----A-----AAG-TC--TTATGCATG-ACAGATT-T---CCT------AG-GAATTTA-----TTT-TCAA--TTGT---C-TACAGTTGAT--------------TTCATTCATTTTAAAAATGATATGAT-TCATATACAAAAGTTAGGT-ACTGGGATGAGATCCAAAGGTGTGCAGACCTGTG-GAACACTCTTTTT--GGGATGTTT
gi|28 : CACTTGA-ACTAGGATTTACCGCCATAGAACATTGAATAGA-----TCTCCAAA-TC--TTTTAAATG-ATAGATT-T---CCT------AACGAATTTG-----CTT-TAAA--CAGT---C-TAAAAAAAATCCTAGAGGATAAT-TTTATGTAT
gi|8 : cACAA-AGTCTAAAA-TTAATTTTAGAAA-ACA-ATT-T---TAT---------GCATTTC-----AAT-GAAA--TGGTTTNC-TAAAATTTATCTTAGAGAACGAT-TTTATGCATAACAA---TGAAATTGT-TTATAGACAAAGGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCTGACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AA-AAAAATGGTACTATGTTGTCAATAAAAAGTTCGGATAAAACTTT-G---AAA-CCTTTATTAGACCA-TCATGGAAACGCTATTTA-CACGACTGTTTTATCATTTGGGATAAAGGTGAAGATC---------------TTTGA-TATTCTAAACTCT--CTGAGCCCTACAATGAAATTTAAAATGGAATCGGATTTGTTACTTCGCCATTTTATATAGAAATCAGCTAGCATTCCTTGACGTTATGGTGATGAAAAAATAAA--GCA--ACATTGTAACCAATATCTTCTACATAA-AACGGAT-ACCAATCAATA-TCTAT-TATCTGATTCATACAACCCTAAAC-ATACC--AGA-AATAATATTCCATATAATTTAGCAAGA-CGTGTTTGTA-CAA-TAATATCAGACACTGAAAT-TCT-A--AATATTCAT-CTCGCAGAATTAGAG
gi|27 : ATGGATTTTGA---TGAAATTAT-TTA-----------TAGGC-ATGGCAATGGGAACTAAAGTTGCGCCCATTTATG-TAGCA-TCGTTTC--AGACTTTTTAC-CAAAAAAA---TACTCTACTA--AAGGAAAA-TTCACACAACATTCT-GTGCAAA-Caaattactactgtaaagacactatcctaaaaagataattaaaattgaaattaacgaagcaaaatcacatgaaagaaaggacctcctta
gi|17 : GCATTTTGA---TGAAACTATATTACAGACAAA-GCTAGGCCACTGCCATGGGAACCAAAGTTGC-CCAAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGAGAAATATTTGGACAAAACTTTTG---AAA-TCTTTTTCAAAACAGTCGTGGAAACGTTTTTTG-GACGATTTTTTTATTAGTTGG-ACAA--GAGAAGACCAGTTAA--CGAGTTTTTCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTCCA----------------------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAAACCGCA--AG---GTAACAGACGTGTTCTACAAATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTA-AAA-AACAATATTCCATACAATTT-GCAAGA-CGTCTCTGCACCAA-Tac
gi|18 : CATTTTGA---TGAAACTATATTACAGACAAA-GCTAGGCCACTGCCATGGGAACCAAAGTTGC-CCAAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGAGAAATATTTGGACAAAACTTTTG---AAA-TCTTTTTCAAAACAGTCGTGGAAACGTTTTTTG-GACGATTTTTTTATTAGTTGG-ACAA--GAGAAGACCAGTTAA--CGAGTTTTTCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTCCA----------------------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAAACCGCA--AG---GTAACAGACGTGTTCTACAAATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTA-AAA-AACAATATTCCATACAATTT-GCAAGA-CGTCTCTGCACCAA-T
gi|1 : -AAGAGAAATTAT---CTACAGTTCGAGAAACATTTGGACAAGACTCT-G---AAAACTTTT--TGAAACAATCGTTGA-ACTTTTTTTTTGACGATTGTTTTATCATTTGGGCCAGAGGAGAGGACCAATTAATGGAG-TTTTTCAA-TATTCTTAATACG--CTAAGTCCTACCATGAAATTCACCATGGGATCCA----------------------ATAGAAATATGTTGTCATTTCTTGATGTCATGGTTATT--AAATGAGA--GTACCGCATAGTAACAGACGTGTTCTGCAAATTAACAGAT-ACCAGACAATACCTTA--TGCTTCATTACTGTTACCCTTAAG-ATGCT-------ACAATAGTCCATACAATTTGGCAAAA-CGTCTATGCA-CAA-TCTTTTCTTATGCTGAAAT-CCT-C--AAAAGTCGC-TTAGCAAAATTACAG
gi|3 : aatatagaagaaataaccaatgacacaagcgggttttgcaaatagctacgtttggctgaaattttcttatatcacgaagaagacgaatctgttgttacaaacaagtaattatatgccccccccccccccgaagaaacgtaaacttggattatttcatcaatactgtaaaccatttcccatggagaaacctaccaaaaatcatacaacaagtaacgtttatgtatcggaatggactgtcattgaaaatgaaaaaaagataacagtatcatcataaaagaaacggataaaagcagctctgaagttgaaatggaccgtgaatattacaaatcattgtgtcttgcagtgctagagaacagtacatactacgagaaacaggaatcgtatgactctaaagaagtcttgcaaaaacttgaaaaaatcatcactgaaaatgaagataaactaacaaccaggaaacatcttgccttttgagatttaaaacgaaaaccagtaacttttatattttaccaaaaatacataaagtcatgtcataaacgacaaatgcaaagatttggaatcctcatatgttcagttgctcttataattagaaccattttcgcgggacctacctgcgaaactaatagaattagctacctcttagatttattagtgacgccattcattaccagatttcagaattacatcagataaaccgtaaactttcttatttcacttccagaggaaattaactcggaatccatattagtctcatttgatgccacgaacctctattctaatattcgtcataaactcggactagccaccaatgaatattggatggactgttttccccatctttaactcgagatatttcctaaagaattcgtcatatcaagtctgaaattaatctagaaaataacatcatgtattttgatgaaactatttacagacagaagcttgacactgtcatgtgaaccaaagttgctccTGACAGAT-ACCAAGCAATA-CCTAT--GTGTCATCCTT--CACCCAAAACCATACTTAAAACAATAATATTCCATACAATTTGGCAAGACTGCCTCTGCA-CAATTAGTTTCTGATGCTGAAATCCGTCC--AA---TAGTGCTTGCGGAaatgcattattacaacgacgttaccaagtgcaattaattaaaaacggtttcaacaaagctaaatcccaggatagaaaggttcttcaagtaaaatccaaacctcgtca
16 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|9 ): TCATTCATGACGTGCACCTCTTCCAACATCTTGTATGTAATAACTTGTGCAGGCTGTGGAGAAAATTACATCGGCCAGACAGGCGACACCTTACGTCACAGGATGACTGTCCACCGTCAACAAATAAGAGAACCAAAGTACCAGTGTACTAAAGTCAGTGAACATATTCGAAACTGTGCCAAAAATTATCATCCGAACTTTACCGTTTTCCTCTTTTACAAATTCTTAAAAGATACCACGGAAACAGAACGTGAAACAAAAGAAAAACTGTTTATTCGAGGATACAAACCTGCGCTAAATGCTACACAATTGTAAACTTCTTTGAAAAATTATTTTCAGAAACATTCCCCCGCATTATACGTAAGGTCAGAATTTATTTACAGTAATCAATCTGTCATATATTATGTTTAAATGTCCCCCTACTACAATTGTACATACTGTGTATTGTATATGTCCCCCCCCCCTTTCCTCTTTCTCCCTTCCATTAATATTATAAATATTGTACAATGCATGCATGCCCTCTTATTATTATATATTCTTACCATTTTGTATATTTCAATATTTGTGTAAAGTATGGCGACCCCCCC
Unaligned ( gi|10 ): CTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACCAAAGACAAAAACTAGGAGCTTCAACCATAACAAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCGTACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAAACACCACAACGTTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGAACCCAACCGAATTTTGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATTCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCCACACCACGCCAAAA
Unaligned ( gi|11 ): AACTTTCTACATCCTCCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACGAGATGGGGAAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACAAAAGACAAAAACTAGGAGCCTTCCACACCATTAACAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCTCACCACAGCGTTCCCGGACAATATGATTAGGAGCGGAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGACCCAACCGAATTTTGATAGCAACAAAACAAAGAACAGGAGAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCACACCACGCCAAAA
Unaligned ( gi|12 ): TTTCACATCCTCATGAAAAATGGAATGATGACTTTTTGTGAAGACAAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAAACCCAATTCAAAAAGGAACACACAAAGACTAAAAAACTAGGAGCCTTCAACCAGTAACAAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAAGACATCACCAACGATACAGAAAACAGCGTTGAAACACCACAACGTCTAGAAATTTTTTTTTAGGATATGGCCGCAGAACCCAACCGAATTGGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAAATAATAAATGTATCAAAACGGACATTGACTGATCATGAAAATTAGGATACGTTGAAAAAGGACTAAAATTCACTCCCACACCACGCCAAAA
Unaligned ( gi|13 ): AACTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCAATTCAAAAAGGAACACAAAGACAAAAACTAGGAGCCTTCCAACCAAGTAACAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTCTTTTTTTAGGATATGGCCGCAGAACCCAACCGATATTGATAGCAACAAAACAAAGAACAGGAAAAACCAACCCATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCTCACACCACGCCAAAA
Unaligned ( gi|14 ): CTGATGCTGAAAATCCTCAATATAGTCGCTTGGCGGAATTACATAATGCACTACTACAACGACGTTACCAGTACAATTAATCGAAAAACGGATTCAACAAAGCTAAATCTAAGGAAAAGAAAAAGATCTTCAAGTAAAACCCAACCTCGTCATGTGTATTACCATTACGTTTCAACGCACAATCCAAAAATCACGGAAGTTTTTCAGGTTATTAATAATAACCTCCCTATTTTAGAAGAAGCCCAGATATAAAAAAAAATATTGGAATCAACTAAAAATCATCAAAAGTAAAACGTCAAAGCTCTTCTCCAAACCATTCTACCAGAGCCAGTGTTTTCAGCACCAGCAGTGAAATCCCTATTGTCAGCAAATGCTAGATAAACCCAAGTGCACCCACGTGCCCATATTTAAAACCCCGGGATCTCAATTTTTATTTTCAAAAATGGAAGCAATTTACAGTGGAAATCACAACATCAACTTTCTACATCCTCAT
Unaligned ( gi|15 ): ATCTAACAAGAGCCTGTTTTGCTAGTCAACATTAAAGATTTTCCCGTCAATCACTAAATGCTACAAAACCCAACATGCGCCTACGTGCAAATACAGAAACTCAAGGATCCGAATTTAGATTTTCAAAAAACGGCCAGTAGAATTTACAGTAAAATCATCAATCACATGTGTTTCGTTCCAATCTGATATATGTTATTACCTGCCGCCGGGGACGTGGTGAAAATTATTTATCGATGAGACACGGACACACACTAAGGACATCGGCGATTTGACCGAATTTCACCGAAAAAAACCAACCGAGAACCTAAATATCAGTGTTTACCACATCCTAAATTGTTGCCAAAAATGTCTATCCGAATTTTACAGTTCTTTCATCTTATAAATTTCGTCAAGAACCACGACAGAAAAAGAACGTGGAAAACCAAAGAAAAACTATTTATTCAAAAAATATAAACCACTTCTAAACTGCAAC
Unaligned ( gi|16 ): CTGATGCTGAAAATCCTCAATATAGTCGCTTGGCGGAATTACATAATGCACTACTACAACGACGTTACCAGTACAATTAATCGAAAAACGGATTCAACAAAGCTAAATCTAAGGAAAAGAAAAAGATCTTCAAGTAAAACCCAACCTCGTCATGTGTATTACCATTACGTTTCAACGCACAATCCAAAAATCACGGAAGTTTTTCAGGTTATTAATAATAACCTCCCTATTTTAGAAGAAGCCCAGATATAAAAAAAAATATTGGAATCAACTAAAAATCATCAAAAGTAAAACGTCAAAGCTCTTCTCCAAACCATTCTACCAGAGCCAGTGTTTTCAGCACCAGCAGTGAAATCCCTATTGTCAGCAAATGCTAGATAAACCCAAGTGCACCCACGTGCCCATATTTAAAACCCCGGGATCTCAATTTTTATTTTCAAAAATGGAAGCAATTTACAGTGGAAATCA
Unaligned ( gi|21 ): CAGTCATGACGTGCACCCCCCCCCCCAACATTTAATGTATCATTATTTGCGCCGACTGTAGATAAAATTACATCTGTCAGACAGGCAAAACACTATGATATAAGATGACTGTGAACTGTGAACAAATAAGAGACAGTGAACATATTCAAAATTATCTCAAAATCTTAATCCAAACATTATCACTTTCTCTGGACAAATTCCTAATATATCATATA
Unaligned ( gi|23 ): GTATATCATTACTTGCGTCGACAGTAGAGAAAATTACGTCAGTCAGACAGGCGAAACGCTACAATATAAAATGGCGAAGTAACAATGTATTAATATAAAATGACGGTGCACTGTGAACAAATAAGAGACAGTGATCATATTCAAAACTATGTCAAAATGATTTTTCAAAACATTATCACTTTACAAATTCCTAATATACATACATCA
Unaligned ( gi|26 ): TATCAGTGTACCCATGTAAGCAAATTAACACATCCGAAATTGCGCCAAAAATGTTTATCCAAATTTTACCATTTTTCCATTTTATAAATTTCATAAAGACACAACAGAAAAAGAAACTTTTTTTTCAAAAATATAAAC
Unaligned ( gi|30 ): GTAAACTTCTTTGAAATTTTATTTTCCGAACATTTTCCCGCATTATACGTAGGTCAGGAATTTAGTT
Unaligned ( gi|31 ): ATATACAGTAAAATCATCAATGACATGTGTTCGTTCAAATCAGATCTATGTTATTACCTCCGCCGG
Unaligned ( gi|32 ): AATTTTCTCAATACACCAAATCCTACCATGAAATGCATCATGCAATCCATTAGAAACATGTCCT
Unaligned ( gi|33 ): ACCCTAAAAAATTTATTGAAAATGGAATTAATGAAGGAAAATCACATGAAAGAAAGGACCTCC
Unaligned ( gi|34 ): TGAAGAAAATTCATTAATCGGAATGTTGAGGAGTTGTTCAG
Alignments
lowQualScore : 1111111111111111111111111 111111111111111111111
lowQualScore : 111111111 0000000000000000000000000 1111 1 5555555 3333 11 111111 1 22222 11 222222 11 111 111 111 333 1 22222 111111 22222 4444444444 111 11 11 1111 222222222222 1 11 1 1 1 1 1 1111 11111 2 111 1 000000000000000000000 11111 111 1 2222222 111111 11111 1 11 1 1111 11111 1 2222222 333 555555555555555555555555 11 1 111 1 111 111 1 1 1 111
lowQualScore : 1 5 3 999 5 0 5 999999999 1111111111111111111111111 0 6 5 2 1 6 0 2 4444 77 6 6 888 1 3 8888888 6666 44 9 777777 99 3 8 8 44 88888 6 6 99 11 999 1 333333 1 8 8 99 8 11 444 5 99 1 444 8 444 8 8 8 1 55 0 000 8 6 55555 8 0 0 8 111111 22222 4444444444 2 1 1 8 444 11 8 0 0 8 8 8 11 8 1 8 9999 0 999999999999 8 0 1 33 0 2 0 0 0 0 0 4 55 44 1 3 0000 00000 6 3 0 444 6 77 6 2 7 6 2 3 6 1 000000000000000000000 5 6 5 5 44444 66 5 5 888 66 1 4 1 1 5 1 000 55 5 0 1 5 888 2222222 333333 66 777 4 3 0 4 7777 22 8 44 8 0 5 22222 1 0 4 6 33 9 0 1 4 888 1 0000 5 1 5 88888 3 7 4 1 6 1 6 7 4 2 0000000 6 6 00 4 333 0 0 000000000000000000000000 66 7 3 3 1 6 77 3 8888 3 2 6 5 1 22 333 1 0 7 1 5 444 000 1 5 0 1 5 1 1 1 77 777 0 5 5 1
lowQualScore : . . . ... . . . ......... ......................... . . . . . . . . .... .. . . ... . . ....... .... .. . ...... .. . . . .. ..... . . .. .. ... . ...... . . . .. . .. ... . .. . ... . ... . . . . .. . ... . . ..... . . . . ...... ..... .......... . . . . ... .. . . . . . . .. . . . .... . ............ . . . .. . . . . . . . . .. .. . . .... ..... . . . ... . .. . . . . . . . . ..................... . . . . ..... .. . . ... .. . . . . . . ... .. . . . . ... ....... ...... .. ... . . . . .... .. . .. . . . ..... . . . . .. . . . . ... . .... . . . ..... . . . . . . . . . . ....... . . .. . ... . . ........................ .. . . . . . .. . .... . . . . . .. ... . . . . . ... ... . . . . . . . . .. ... . . . .
lowQualScore : 7 7 0 999 7 4 0 555555555 6666666666666666666666666 4 9 7 1 3 6 7 5 2222 33 7 7 333 0 3 8888888 3333 88 3 777777 22 3 0 0 00 00000 4 0 00 88 888 0 000000 4 0 0 00 0 00 000 0 00 0 000 0 000 0 0 0 4 88 6 888 0 0 44444 0 6 8 0 000000 22222 2222222222 8 0 0 0 000 00 0 6 8 8 0 0 00 0 0 0 8888 8 666666666666 0 6 0 88 2 0 0 0 0 0 0 2 00 66 0 0 8888 55555 7 7 7 777 7 77 7 5 8 7 5 3 7 7 222222222222222222222 7 6 7 7 33333 00 0 0 888 99 0 4 0 0 7 0 444 55 0 0 0 0 888 6666666 555555 22 333 0 2 1 0 4444 77 0 88 9 1 6 55555 0 0 2 5 88 2 5 4 0 444 9 9999 7 0 7 66666 3 7 0 0 7 0 7 3 0 2 0000000 7 7 33 3 111 7 7 666666666666666666666666 77 2 0 0 0 7 55 7 0000 0 5 7 4 4 99 999 0 4 1 0 7 000 000 1 7 4 4 7 0 0 4 99 111 7 7 3 0
consensus : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATGCCCCCC--------AAAGGT-GAAA-CG-AAAC-G--TA----TAATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-TG-T-ATTGAAAA---TAGATAAATGACGATAACAT--CATAAT-AAA-GAAGCGG-ATAAAGGCGGCGCT----AGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAATACATCGT-CGATGAACACGGACAG-TAA-ACTTACAACCAAG-GAAA-CAGATTACCT--ACTCTC------GAGATTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAATT--CG-GAAT-C--A-CATATAT---AA---GT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-CGTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACA-CCGTAG-ACT-TTCTAAATTCACT-TTCC-----AAA----TCAACTCGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTGCNGTTCGA-GAAAAA-TTCGGACAAAACTTT-G---AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATTCT-ACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAA-ACCGCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGC-CTNGCGGAATTACAG
Reference ( family-1323 ) : AATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATGCCCCCC--------AAAGG--GAAACCGCAAAT-G--TA----TAATTTAGATAAATTCGTCGA-TACTGTAAAACANTTTCCCGTGGAACACCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAANAAAT-CGGAATGGA-TG-T-ATTGAAAA---TAGATAAATGACGATNACAT--CATAAT-AAA-GAAGCGG-ATAAAGGCGGTGC-----AGTCGTTATAATGGACCGTGA-NTATTA-TAAAT-CANTGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-NAANCGTA---TGA-CTC---TAA-A-GAG-GTCTTGCAAAAAACTTGAAAAATACATCGT-CGATGAA-ACGGA-AG-TAA-ACTTACAACCAAG-GAAA-CAGATTACCT--ACTCTC------G---TTTGANGTNAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAATT--CG-GANT-C--A-CATATAT---AA---GT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTCGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTNTCTNTTATAT--T-TAT--TGCTGAAA-CCATTACGTTA-ATAAAGT-T-NAAAG-TTACATCAGAGACA-CGGTAG-ACT-TTCTAAATTCACN-TTCC-----AAA----TCAACTCGGAATC-CATNTTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-NT-CT-AA---T--ATCCCNC-ATGANCTNGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANNNAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAACTAT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTACNGTTCGA-GAAANA-TTCGGACAAAACTTT-G---AAACCTTTNTTAAAACAGTCGTGGAAACGTTTTTTNGACGATTTTT-TTATCANTTGGGACAAAGGAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTCCGACTAAGTCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTTCTTGACGTCATGGTTATTAAAAAACAA-ACCGCAACATTGTAACAGACGTGTTCTACA-AATTGACAGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGTCACCCNAAAC-ATACT-AAAAACAATA---TTCCATACAATTTGGCAAGAC-GTCTCTGCA-CAA-TAATNTCNGACGCTGAAA-TCC--TCAATAT--TCGT-CTCGCGGAATTANAG
gi|1 : AATGACACAAGCGGGTTTTGCAAATAGCTACGT-TTGGCTGAAATTTTCTTATATCACGAAGA------AGACG-AATCTGTTGTTACAAACAAG--TAA-TTATATGCCCCCCCCCCCCCCGAAG-----------AAAC-G--TA-----AACTTGGATTATTTCATCAA-TACTGTAAACCA-TTTCCCATGGAGAAACCT----ACC-AAAAATCA-TA-CAACA-AG-TAACGTTTATGTAT-CGGAATGGACTG-TCATTGAAAA---TGAAAAAAAGATAACAGTAT--CATCAT-AAAAGAAACGG-ATAAAAGCAGCTC-----TGAAGTTGAAATGGACCGTGA-ATATTA-CAAAT-CATTGTGTCT------TGCAGTG-CTA-GAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-A-GAA-GTCTTGC-AAAAACTTGAAAAA---ATCAT-CACTGAA-AATGA-AGATAA-ACTAACAACC-AG-GAAA-CATCTTGC-----CTTTT------GAGATTTAAAACGAA-AAC---CAGTAACTTT--TATATT-TTACCAAAAATACAT-AAAGTCATGTCATAAACG-AC-AAATGCAAAGATT--TG-GAAT-C----CTCAT--------------------ATGTTCAGTTGCTCTT--ATAATTAGAACCATTTTCGCGGGA-CCTACC-TGCG-AAA-CTAATA-GAATTAGCTACCTCTTAGAT--T-TAT--TAGTGACG-CCATT-CATTA-CCAGATT-T-CAGAA-TTACATCAGATAAA-CCGTAA-ACT-TTCTTATTTCAC--TTCCAGAGGAAA----TTAACTCGGAATC-CATATTAGTCTCA-TTTGATGC-CACGAAC-----CTCTA-TT-CT-AA---T--ATTCGTC-ATAAACTCGGACTAGCCACCAATGAATATTGGATGGACTGTTTTCC-CCA-TCTTTAACTCG-AGATATT-T---CCT------AAAGAATTCG-----TCA-TATCAAGTC-TGAAATTAAT-CTAGAAAATAAC-ATCATGTATTTT---GATGAAACTAT-TTACAGACAGAAGCTTGAC-ACTGTCATGTGAACCAAAGTTGCTCCAAGAGAAATTAT--CTACA---GTTC-----------------GAGAAA-----------CATTTGG-ACAAGA-CTCTG--AAAACTTT--------------TTGAAACAATCGTTGAACTTTTTTTTTGACGATTGTT-TTATCATTTGGGCCAGAGGAGAGGACCAATT--AATGGAGT-TTT-TC-AATATTCTTAATAC--GCTAAGTCCTACCATGAAATTCACCATGGGATC-------------CA---------ATAGAAATATGTTGTCATTTCTTGATGTCATGGTTATTAAATGAGAGTACCG---CATAGTAACAGACGTGTTCTGCA-AATTAACAGA-TACCAGACAATACCTTAT-GCTTCATTAC-TGTTACCCTTAAG-ATGCT-----ACAATA---GTCCATACAATTTGGCAAAAC-GTCTATGCA-CAA-TCTTTTCTTATGCTGAAA-TCC--TCAAAAG--TCGC-TTAGCAAAATTACAG
gi|14 : aatatagaagaaataaccCTGATGCTGAAAATCC--TCAATATAGTCGC-TTGGCGGAATTACaatgcattattacaacgacgttaccaagtgcaattaattaaaaacggtttcaacaaagctaaatcccaggatagaaaggttcttcaagtaaaatccaaacctcgtca
gi|16 : CTGATGCTGAAAATCC--TCAATATAGTCGC-TTGGCGGAATTACtaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatcacaacatcaactttctacatcctcat
gi|17 : GCATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTTTG---AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTTGG-ACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAA-ACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-Ttaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatca
gi|18 : CATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTTTG---AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTTGG-ACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAA-ACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-T
gi|19 : AATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCC-ACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATCAGAGTAA-TTTTATGCCCCCC--------AAAGG--A----CGCAAATGG--TA-----AATTTAGAT-AATTCATCGACTACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTACTA-CAA-A-AAATAACGTTAACAAATCCGGAATGG--T-----TTGAAAA----AGAT-AAT-AC-ATCA-AT--CATAAT-A
gi|2 : aatatagaagaaataaccAACGACGCGGACGCATTTTGTAGACGATTACGA-CTAGCT-AATTTTTCTTG-GTAAGGAAAATG---ATGACG-CATCTATT-TTGCCAACAAAAGTAA-TTT-ATGCCCCT----------AAGGTAGAAACCATAAAT-AATTAACATTAATTTAGATAAATTTGTTAG-TACAGTACAATAATTTCCTGTTGAACAACTT----AAT-GCAAATTG-TGTCAA---AAACAATTTTAAAAAGT-CGGAATGGAATGCT-ATTGAAAACT-TAAA-AAATGACGATAACAT--CATAATCAAG-GAAGCCG-ATAAAGGTGGTGC-----AGTTGTTATAATGGACCGAAA-TTATTG-TAAAA-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AAAAAAA-AA--AAAA---AAAG-CAAACATA---TGA-TTC---TAA-A-GAA-GTCATG-AAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG--AA-ACTTACCGCTAAA-GAAA-CTGATTACCT--ACTCTC------G---TTTGATGTTAA-AAC---CAGTATTTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTAACG-AT-AAATGCAAAAATT--CC-GATT-C--ATCATATAT---AA---GT-GTTGA-AA-GCCCAACAGACCTC--AAAATCAGACCTATAGTTGCGGGA-CC-ATCATGTG-AAA-CTCACAG-AATTAGTTATCTAATATAT--G-TAT--TA-TCAAA-CCCTTATGTTG-ATAAGGC-T-CAAAG-TTACATAACAGATA-CGATAG-ATT-TTCTAAA--CACTCTTCCCGGAAAAG----TCAACACGGAATC-AATTTTAGTGTCA-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATTTCAC-ATGAACTAGGATTACCCGCCATAGAACATTGGATAGACAGATTCCC-AAA-TCTTTTAAACG-ATAGATT-T---CCT------AAAGAATTTG-----ATT-TAAAAAGTC-TAAAATTAATCCTAGAGAACAAT-TTTATGCATTTC---AATGAAATGGT-TTACAGACAAAAGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCC-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AAGAAAAATTGTACTCTGTTGTTAAG-GAAAAG-TTCGGACAAAACTTT-G---AAACTTCTATTAGAACA-TCATGGACACGCTATTTAGACGACTTTT-TTATCATTTGGGACAAAGGTGAAGATCAACTAAAAC--AAT-TTT-TTG-ATATTCTAAACTCT--CTGAGCCCTACAATGAAATTTACAATGGAATC-------------GG---------ATAGAAATCAGCTAGCATTCCTTGACGTGATGGTGATGAAAAAAGAA-A--GTAACATTGTAACCGATATCTTCTACA-AAATAACGGA-TACCAAGCAATA-CTTAT-TATTTGATTCGTGCCACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAT-GTCTTTGTA-CAA-TAATATCAGACACTACAA-TTA--TCAATAT--TAGT-CTCGCGGAATTAGAG
gi|20 : C-CAT-TGAGTCTTA-ATTGATGC-CACAAACACCAATCCTA-ATACT-AG---T--ATTTCTC-ATAATCTAGAATTAGCCGCCATAGAATAATGGATATGCTGATTTCC-TAA-TCTTCAACACG-TGAGATT-TTCACCT----------CATTTG-----TTA-CATCGGGTG-TACAATTAATCTTGGAAAACAAT-TTTA------------ATGAAAATGT-TCACAAACGAATGCTGGCC-ACTGCGATAGGAACAAAA
gi|22 : acaggattagTA-AT-CTGAA---T--TTTCCAT-ATGATATAG-ATTAGTCACCGTAGATCATTGCGTAAAA---------AAG-TCTTATGCATG-ACAGATT-T---CCT-------AGGAATTTA-----TTT-TCAATTGTC-TACAGTT-------------GAT-TTCATTCATTTTAAAAATGATATGAT-TCATATACAAAAGTTAGGT-ACTGGGATGAGATCCAAAGGTGTGCA-----GACCTGTG-GAACACTCTTTTT--GGGATGTTT
gi|24 : TTATAT--T-TAT--TGCTGAAA-CCATT-CATCA-CCAAAGT-T-AAAAG-TTACATCAGAGACA-CCGTAG-ACT-TTCTAAATTCACT-------------------AACTCGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---T--ATCCCTC-AAGACCTCGGACTAGCCGCCATTGAATATTGG
gi|25 : cAATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATAAGAGTAA-TTTTATGCCCCCC--------AAAGG--A----CG-AAAT-G--TA-----AATTTAGATAATTTCATCG
gi|27 : aatatagaagaaataaccATGGATTTT---GATGAAATTAT-TTA-----------TAGGC-ATGGCAATGGGAACTAAAGTTGCGCC-----CATTTATG-TAGCA-TCGTTTC--AGACTTTTTAC-CAAAAAA---ATACTCTAC---TAAA-GGAAAA-TTCACACAACATTCT-GTGCAAAC
gi|28 : CCAC-TTGAACTAGGATTTACCGCCATAGAACATTGAATAGATC----TCC-AAA-TCTTTTAAATG-ATAGATT-T---CCT------AACGAATTTG-----CTT-TAAACAGTC-TAAAAAAAATCCTAGAGGATAAT-TTTATGTATac
gi|29 : TCTATTGTAGCCAACAAAAGTAA-TTGTATGCCCCCT--------AAAGGTGGAAACC-----------A----TAATTTAGATAAATTTGTCAG-TACAGTACAACAATTTCCTGTCAAACA
gi|3 : TTGACAGA-TACCAAGCAATACCT-AT--GTGTCATCC-T-TCACCCAAAACCATACT-TAAAACAATAATATTCCATACAATTTGGCAAGACTGCCTCTGCA-CAATTAGTTTCTGATGCTGAAA-TCCGTCCAATA-----GTGCTTGCGGA
gi|32 : atAATTTTCTCAATAC--ACCAAATCCTACCATGAAATGCATCATGCAATC-------------CA---------TTAGAAACATGttgagcagatgccgactactacaacgagttacccagtacaatttaatcgaaaactgtgtattcgaaacaaagctaaatctcggaaagaaggatcttctttcagtagaaccaaacctgcgtcactagtgctttactccaactttcaaaagcacaattccaaaaaattcggaagtttttcaggttattaatatataacctcgccattttggaagaagacccagatttgaaaaagaaattactggaacaacataaatcatcaaaatgaaacgtcaaagcccttcatcttcaaatctcttctaaccagagcagtttttacaacaccagcagtgataattcccttattgtcaagcaaatgtagataaacccaaagtgcgctccccgtgccctaatttaacttactaacacttggatctcatttattttcaaaaacggagcagtgttatattatacaggaaatcatccatgacgtgccctcttctcaacatctttatgtgtaataactgtgcgaccgcgctgctggaggaaaattacatcggctcagacagcgaacctttacgtcacagcgatggactgtccaccgtcaaccaataagagaaccaaaataccagtgtaccaaagtcatggaaatattcgaaaactgtgcgcaaaacattgtcagtccgaactgtctaaccagttttccccttattacaaattcttgaaagatacacgtggaaacagaaacgtgaaacaaaagaaaactgttctattcgaggatacaataacctgcgtaaatgctgcactacttgtaaacttctctgaaaattatttttcagggaacttgccccgcatttaacgtaaaggtcaaattgtatttacagtaatcaattgtcatatttatattatgtttaaacagtccccttactcattgtacatactatgtccctacccccctaatcccccccattagatgattactaaataattggtaccaatttatgcatatgccctggctattattattcttacatatactaaccgattttgtatacttttggtaatgtgcgcaacttaaggtgcgaattcccccccc
gi|4 : AACGACGCGGACGCATTTTGTAGAAGATTACGA-CTAGCTGAATTTTTCTTAGATAAGGAAAATG---ATGACGCAA-----------CAACAAAAGTAAATTTTATGCCCCCA--------AAAGGTAGAAAGTTCAAAC----CA----TAATTTAGATAAATTTGTTAG-TACAGTACAACAATTTCCTGTCCAGCAACTTTTAAAAT-GCAAATTG-TG-T--CAGAAACAATTTCAATAAGT-CGAAATGGAACGCT-ATTGAAAACTTTAAA--AATGACGTCAACATATCATAATCAAG-GAAGCCG-ATAAAGGTGGCGC-----AGTTGTTATAATGGACCTCGA-TTATTA-TAAAT-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AATACTA-TG--GGAA---A-AGTCAAACATA---TGA-TTC---TAA-A-GAA-GTAATGAAAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG--AA-ACTTACCGCTAAA-GAAA-CTGAATACCT--ACTCTC------G---TTTAATGTAAA-AAC---CAGTAATTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTACAG-AT-AAATGCAAAAATTTCCG-AGTT-CAAA-CATATATAAAAA---GTGGTTGA-AA-GCCCAtcct
gi|5 : cttttcaaattctaatgaaaatgtggaaaaatgaatgtttgtgcgaggaactaaaatccatagaacgatggataaaatccgataaatggtttcaaagttacgaagcacaatttaaaaaagaacatcaagacaaaaatcccttcataaaatcaggtaaattccagccagacaacataaataggaaggagacaaacaggtaccaacccacggtagaatccaacttaaaccgcagaaaatatccgtcaagccggaaccagacggatgacaatattagacaccagggacgcccacagatccctttccacgagcgaccatacaaacggaacaacaatcggcagggaagtattatcacgcgcaaaaattcttttttaggatatggccccagacaaaacgatattagatagcacaaaatatagaaaaagacctgaaacctgacattaaagttactaatttatatatctaacgaatattaacagaaaatgaaattaatgtacttgaaaaaggacttatattcacccccaccccgcgcataaaaaatacagaggaaattaaaAATGACACGAGCGCG-TTTGCAGAAAGCTACGTATTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATATGA-TAA-TTTTATGCCCCCC--------AAAGG--A----CG-AAAT-GGTTA-----AATTTAGATAATTTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACCAAAAAATTA-TA-CAACA-AAATAACGTTAACAAATCCGGAATGG--T-----TTGAAAA----AGATAAAT-AC-ATCA-AT--CATCAT-AAA-GAAGCGGAATATA-GCAGTGCTGGCTAGTCGGTA-GATGGACCGTGGTGTATT--TAA---CAATATATCTTAGGTGTGCCGTGCCTC-GAGAACAGAATTACATTACCGGTAGAAACCACAG-CGAGAGTACGTTGACCTCATATAACA-GAGTGTCTTGCAAAAAACTTGAAAAATACATTGTCCAATGAA-ACGGG-AG-TAACACTTACAATCAAGAGAAATCAGA--ATCTACACTCTCTTGAGAA---TTTAAAGCGAACAACAAGGAGTAACTTTTCTATTGCGTTTCCAAAAATACATAAAAGTCAAATCAT-AACGTACTAAAGTTAAAAATT--CGAGAAT-C--A-CACCTAT---AATATGT-ATTGACAATGTCCAGATGATCTTAAAAAATTAGCCCAATTGTTGCGGGACCC-ACC-TGCGAAAA-CCGACAGGAATTAGTTCTCAATTATAA--T-TATTGTGCTGAAACCCATT-CATCA-CCAAAGTATAAAAAG-TTACATCAGA-ACACCGTTAGTACTGTTCTAAATTCACT-------------------AACTCGGAATCTCATA-TAGTCTCATTTTGATGTGCACGAAC-----CTCTATCT-CT-AATTCT--ATCGCCT-AAGACC-GGGATGAG-CGCCATTGA--ATTGATTAGACCGTTTTCCTACATTCTTTTACACGAAGAGATTGT---TCTGATATAAGAGAATTTGCACTCATC-TATCAAGTCTTAAAATTAATTGTTGGAAACAAG-CTT---CATTGC---AATaacagacatcaaaa
gi|6 : aatatagaagaaataaccAATGACACGAGCGCGTTT-GCAGAAA-CTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACA-GAGTAA-TTTTATGCCCCCC--------AAAGG--AAAA------------TG----TAATTTAGATAA-TTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-T----ATTGAAAA----AGATAAATAACAAT--CAT--CATAA----A-GAAGCGG-ATAA-GGCAGTGCT----GGTAGTCGTAATGGACCGTGA-GTATTAACAAATTCATTATGTCT------TGCCGTG-CTACGAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-AAGAG-GTCTTGCAAAAAACTTGAAAAATACATCAC-TGAT----ACGGA--G-TAA-ACTTACAATCAAG-GAAA-AATCTTAC-----CTTTT------GAGATTTAAAGTGAA-AAC---AAGTAACTTT--TATGGT-TTACCAAAAATACATAAAAGTCAAATCATAAACG-AC-AAATGTAAAAATT--CG-GAATCC--A-CATATAT----A---GT-ATTGA-AATGTCCAGATGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAACCCAACAGGAATTAGT--TCTCTTAGAT--TATAT--TGCTGAAA-CCATT-CATCATCCAAAGT-T-AAAAGTTTACATCAGAGA-A-CCGTAGAACT-TTCTAAATTCA----TC--------A----T-AACTCGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---TAAATCCCTCAATGACCTCGGACTAG-CGCCATTGAATATGGGAT-GACCGTTTTCC-TCA-TCTTTTACACGAAGAGATT-G---TCTA-----AAAGAATTTC-----ATCATATCAAGTC-TTAAATTAATGCTTG-AAACAACATTTATGCATTT
gi|7 : aatatagaagaaataaccGTTGT-TATTAGATGAT-TAT--T----AAA-TCTTTAAGTTG-ATAAGGT-T-CAAAG-TTACATAAGAGATA-CGGTAT-ATT-TTCTAAACACAAT-TCCC-----AAAACAGTCAACACAGAATC-AATTTTAGTTTTG-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATCCCAC-ATGGACTAGGATTAGACGCCATAGAACATTTGATAGATAGATTTCC-AAA-TCTTTTAAATG-ATAGCTT-T---CCC------ATAGAATTTG-----TTT-TAGA-AGTC-TAAAATTAAACCTAGAAAACAAT-TTTATGCATTCC---AATGAAATGCT-TTATAGACAAAGGTTAGGT-ACTGAGATCGCAACTAAAGTTGCGCC-----GATTTATG-CTACACTCGTTGT--AGGATTTTTAG-AAAAAAAATT-TACTCTGTT-TTCAAGGAAAAG-TTTGGACAAAAC--T-G---AAACTTTTATTAGAACA-TCATGGAAACGCAATTTTGAC-ATCTTTGTTATCAATTGGGACAAAGGTGAAAATCAACT----C-AAATATCTGTTGGGTATTCCAAATTCT--CTGAGCCCTACAATGATATTTACAATGGAATC-------------GG---------ATAGAAAT---CAG-CATTCCTTGACGTTATGGTGATGCAAAAACAA-A--GTAACATTGTAAGCTATATCTTCTACA-TAATAACCGA-TACCAAGAAATAC----T-TATTTCATTTGTGCCGCTCTAAAC-ATACC-AGAAATAATA---TTCCATAAAACTTAGCAAGGC-GTCGTTTTA-CAA-AAATATCAGACACTAAAT-TTC--TAAATAT--TAGT-CTTGCGGAATTAT
gi|8 : ACAAAGTC-TAAAATTAATTTTAGAAAACAAT-TTTATGCATTTC---AATGAAATGGT-TTNCaaaattacttctgcaaagaagctaccttaactaagaaag
gi|8 : C-TAAAATTTATCTTAGAGAACGAT-TTTATGCATAAC---AATGAAATTGT-TTATAGACAAAGGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCT-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AAAA-AAATGGTACTATGTTGT-CAA-TAAAAAGTTCGGATAAAACTTT-G---AAACCTTTATTAGACCA-TCATGGAAACGCTATTTACACGACTGTT-TTATCATTTGGGATAAAGGTGAAGATC-----------------T-TTGA-TATTCTAAACTCT--CTGAGCCCTACAATGAAATTTAAAATGGAATCGGATTTGTTACTTCGCCATTTTATATAGAAATCAGCTAGCATTCCTTGACGTTATGGTGATGAAAAAATAA-A--GCAACATTGTAACCAATATCTTCTACATAA--AACGGA-TACCAATCAATATC-TAT-TATCTGATTCATACAACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAC-GTGTTTGTA-CAA-TAATATCAGACACTGAAA-TTC--TAAATAT--TCAT-CTCGCAGAATTAGAGtaaaatttatcttagagaacgattttatgcataacaatgaaattgtttatagacaaaggttaggtactgcgatgggaactaaagttgcgctgacttatgcaacactcgtcttaggatttttagaaaaaaatggtactatgttgtcaataaaaagttcggataaaactttgaaacctttattagaccatcatggaaacgctatttacacgactgttttatcatttgggataaaggtgaagatctttgatattctaaactctctgagccctacaatgaaatttaaaatggaatcggatttgttacttcgccattttatatagaaatcagctagcattccttgacgttatggtgatgaaaaaataaagcaacattgtaaccaatatcttctacataaaacggataccaatcaatatctattatctgattcatacaaccctaaacataccagaaataatattccatataatttagcaagacgtgtttgtacaataatatcagacactgaaattctaaatattcatctcgcagaattagagaaattactactgtaaagacactatcctaaaaagataattaaaattgaaattaacgaagcaaaatcacatgaaagaaaggacctcctta
13 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): TCATTCATGACGTGCACCTCTTCCAACATCTTGTATGTAATAACTTGTGCAGGCTGTGGAGAAAATTACATCGGCCAGACAGGCGACACCTTACGTCACAGGATGACTGTCCACCGTCAACAAATAAGAGAACCAAAGTACCAGTGTACTAAAGTCAGTGAACATATTCGAAACTGTGCCAAAAATTATCATCCGAACTTTACCGTTTTCCTCTTTTACAAATTCTTAAAAGATACCACGGAAACAGAACGTGAAACAAAAGAAAAACTGTTTATTCGAGGATACAAACCTGCGCTAAATGCTACACAATTGTAAACTTCTTTGAAAAATTATTTTCAGAAACATTCCCCCGCATTATACGTAAGGTCAGAATTTATTTACAGTAATCAATCTGTCATATATTATGTTTAAATGTCCCCCTACTACAATTGTACATACTGTGTATTGTATATGTCCCCCCCCCCTTTCCTCTTTCTCCCTTCCATTAATATTATAAATATTGTACAATGCATGCATGCCCTCTTATTATTATATATTCTTACCATTTTGTATATTTCAATATTTGTGTAAAGTATGGCGACCCCCCC
Unaligned ( gi|10 ): CTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACCAAAGACAAAAACTAGGAGCTTCAACCATAACAAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCGTACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAAACACCACAACGTTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGAACCCAACCGAATTTTGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATTCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCCACACCACGCCAAAA
Unaligned ( gi|11 ): AACTTTCTACATCCTCCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACGAGATGGGGAAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACAAAAGACAAAAACTAGGAGCCTTCCACACCATTAACAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCTCACCACAGCGTTCCCGGACAATATGATTAGGAGCGGAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGACCCAACCGAATTTTGATAGCAACAAAACAAAGAACAGGAGAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCACACCACGCCAAAA
Unaligned ( gi|12 ): TTTCACATCCTCATGAAAAATGGAATGATGACTTTTTGTGAAGACAAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAAACCCAATTCAAAAAGGAACACACAAAGACTAAAAAACTAGGAGCCTTCAACCAGTAACAAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAAGACATCACCAACGATACAGAAAACAGCGTTGAAACACCACAACGTCTAGAAATTTTTTTTTAGGATATGGCCGCAGAACCCAACCGAATTGGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAAATAATAAATGTATCAAAACGGACATTGACTGATCATGAAAATTAGGATACGTTGAAAAAGGACTAAAATTCACTCCCACACCACGCCAAAA
Unaligned ( gi|13 ): AACTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCAATTCAAAAAGGAACACAAAGACAAAAACTAGGAGCCTTCCAACCAAGTAACAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTCTTTTTTTAGGATATGGCCGCAGAACCCAACCGATATTGATAGCAACAAAACAAAGAACAGGAAAAACCAACCCATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCTCACACCACGCCAAAA
Unaligned ( gi|15 ): ATCTAACAAGAGCCTGTTTTGCTAGTCAACATTAAAGATTTTCCCGTCAATCACTAAATGCTACAAAACCCAACATGCGCCTACGTGCAAATACAGAAACTCAAGGATCCGAATTTAGATTTTCAAAAAACGGCCAGTAGAATTTACAGTAAAATCATCAATCACATGTGTTTCGTTCCAATCTGATATATGTTATTACCTGCCGCCGGGGACGTGGTGAAAATTATTTATCGATGAGACACGGACACACACTAAGGACATCGGCGATTTGACCGAATTTCACCGAAAAAAACCAACCGAGAACCTAAATATCAGTGTTTACCACATCCTAAATTGTTGCCAAAAATGTCTATCCGAATTTTACAGTTCTTTCATCTTATAAATTTCGTCAAGAACCACGACAGAAAAAGAACGTGGAAAACCAAAGAAAAACTATTTATTCAAAAAATATAAACCACTTCTAAACTGCAAC
Unaligned ( gi|21 ): CAGTCATGACGTGCACCCCCCCCCCCAACATTTAATGTATCATTATTTGCGCCGACTGTAGATAAAATTACATCTGTCAGACAGGCAAAACACTATGATATAAGATGACTGTGAACTGTGAACAAATAAGAGACAGTGAACATATTCAAAATTATCTCAAAATCTTAATCCAAACATTATCACTTTCTCTGGACAAATTCCTAATATATCATATA
Unaligned ( gi|23 ): GTATATCATTACTTGCGTCGACAGTAGAGAAAATTACGTCAGTCAGACAGGCGAAACGCTACAATATAAAATGGCGAAGTAACAATGTATTAATATAAAATGACGGTGCACTGTGAACAAATAAGAGACAGTGATCATATTCAAAACTATGTCAAAATGATTTTTCAAAACATTATCACTTTACAAATTCCTAATATACATACATCA
Unaligned ( gi|26 ): TATCAGTGTACCCATGTAAGCAAATTAACACATCCGAAATTGCGCCAAAAATGTTTATCCAAATTTTACCATTTTTCCATTTTATAAATTTCATAAAGACACAACAGAAAAAGAAACTTTTTTTTCAAAAATATAAAC
Unaligned ( gi|30 ): GTAAACTTCTTTGAAATTTTATTTTCCGAACATTTTCCCGCATTATACGTAGGTCAGGAATTTAGTT
Unaligned ( gi|31 ): ATATACAGTAAAATCATCAATGACATGTGTTCGTTCAAATCAGATCTATGTTATTACCTCCGCCGG
Unaligned ( gi|33 ): ACCCTAAAAAATTTATTGAAAATGGAATTAATGAAGGAAAATCACATGAAAGAAAGGACCTCC
Unaligned ( gi|34 ): TGAAGAAAATTCATTAATCGGAATGTTGAGGAGTTGTTCAG
Alignments
lowQualScore : 111111111 8888888888888888888888888888888 1 1111 1 5555555 3333 11 111111 1 1111 11 11 222222 11 111 111 111 333 1 2222 111111 22222 1111 111 11 2222222 222222222222 1 11 1 1 1 1 1 1111 11111 1111 1 999999999999999999999 11111 111 1 2222222 111111 11111 1 11 1 11111 11111 1 2222222 2222 555555555555555555555555 11 1 111 1 111 111 1 1 11
lowQualScore : 1 1 1 5 3 999 5 0 5 999999999 9999999999999999999999999999999 0 5 1 1 6 0 1 4444 77 6 6 888 3 8888888 6666 44 9 777777 99 3 8 8 0 7777 1 6 44 1 6 4 99 11 999 1 333333 1 8 8 99 8 11 444 5 8 1 444 8 444 8 8 8 1 55 0 000 8 0 1111 8 0 0 8 111111 22222 9999 1 8 444 11 8 0 0 8 8 8 8 8 4444444 0 999999999999 8 0 1 33 0 0 0 0 0 0 4 55 44 0 1 0000 00000 6 0000 77 6 77 6 2 7 6 3 6 1 333333333333333333333 5 5 5 1 5 44444 77 5 5 888 66 1 4 1 0 5 1 000 55 5 0 1 5 888 2222222 333333 66 22 1 4 3 0 4 7777 11 8 44 8 0 5 22222 1 0 4 6 33 9 0 1 1 888 1 11111 5 0 5 88888 3 7 1 1 6 1 6 7 1 0000000 6 6 7 1 7777 0 0 000000000000000000000000 66 7 1 1 1 6 77 3 6 1 2 1 6 5 2 1 22 333 1 0 7 1 5 333 000 9 5 0 1 5 1 1 1 77 55 4 4 1 1
lowQualScore : . . . . . ... . . . ......... ............................... . . . . . . . .... .. . . ... . ....... .... .. . ...... .. . . . . .... . . .. . . . .. .. ... . ...... . . . .. . .. ... . . . ... . ... . . . . .. . ... . . .... . . . . ...... ..... .... . . ... .. . . . . . . . . ....... . ............ . . . .. . . . . . . . .. .. . . .... ..... . .... .. . .. . . . . . . . ..................... . . . . . ..... .. . . ... .. . . . . . . ... .. . . . . ... ....... ...... .. .. . . . . . .... .. . .. . . . ..... . . . . .. . . . . ... . ..... . . . ..... . . . . . . . . . ....... . . . . .... . . ........................ .. . . . . . .. . . . . . . . . . .. ... . . . . . ... ... . . . . . . . . .. .. . . . .
lowQualScore : 4 4 7 7 0 999 7 4 0 555555555 5555555555555555555555555555555 8 7 0 3 6 7 0 2222 33 7 7 333 3 8888888 3333 88 3 333333 22 3 0 0 8 0000 4 4 44 0 0 6 00 88 888 4 000000 4 0 0 00 0 00 000 0 0 0 000 0 000 0 0 0 4 88 6 888 0 0 4444 0 6 8 0 000000 66666 2222 4 0 000 00 0 6 8 8 0 0 0 0 0000000 8 666666666666 0 6 0 88 2 0 0 0 0 0 2 00 44 6 0 8888 55555 7 8888 33 7 77 7 5 8 7 3 7 7 555555555555555555555 7 4 7 4 7 33333 22 0 0 888 99 0 4 0 7 7 0 444 55 0 0 0 0 888 6666666 555555 22 77 0 0 2 1 0 4444 11 0 88 9 1 6 55555 0 0 2 5 88 2 5 4 7 444 9 99999 7 6 7 66666 7 7 0 0 7 0 7 3 0 0000000 7 7 1 0 4444 7 7 666666666666666666666666 77 2 0 0 0 7 55 7 7 0 5 0 7 4 7 4 99 999 0 4 1 0 7 666 000 3 7 4 4 7 4 0 4 99 77 3 0 0 0
consensus : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATGCCCCCC--------AAAGGT----ACG---A---------AAC-G--TATAATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-TG-T-ATTGAAAA---TAGATAAATGACGATAACAT--CATAAT-AAA-GAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAATACATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCTA----CTCTCGAG-ATTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAAT-C---A-CATATAT---AA---GT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-TTCC-----AAA----TCAACTCGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTGCNGTTCGA-GAAAAA-TTCGGACAAAACTTT-G---AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAA-ACCGCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
Reference ( family-1323 ) : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATGCCCCCC--------AAAGGT-GAAACG---A---------AAC-G--TATAATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-TG-T-ATTGAAAA---TAGATAAATGACGATAACAT--CATAAT-AAA-GAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAATACATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCTA----CTCTCGAG-ATTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAAT-C---A-CATATAT---AA---GT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-TTCC-----AAA----TCAACTCGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTGCNGTTCGA-GAAAAA-TTCGGACAAAACTTT-G---AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAA-ACCGCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
gi|1 : AATGACACAAGCGGGTTTTGCAAATAGCTACGT-TTGGCTGAAATTTTCTTATATCACGAAGA------AGACG-AATCTGTTGTTACAAACAAG--TAA-TTATATGCCCCCCCCCCCCCCGAAG------------A---------AAC-G--TA-AACTTGGATTATTTCATCAA-TACTGTAAACCA-TTTCCCATGGAGAAACCT----ACC-AAAAATCA-TA-CAACA-AG-TAACGTTTATGTAT-CGGAATGGACTG-TCATTGAAAA---TGAAAAAAAGATAACAGTAT--CATCAT-AAAAGAAACGG-ATAAAA----GCAGCTCT-GAAGTTGAAATGGACCGTGA-ATATTA-CAAAT-CATTGTGTCT------TGCAGTG-CTA-GAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-A-GAA-GTCTTGC-AAAAACTTGAAAAA---ATCAT-CACTGAAAATGAAGA-TAA-ACTAACAACC-AG-GAAA-CATCTTGC-------CTTTTGAG-ATTTAAAACGAA-AAC---CAGTAACTTT--TATATT-TTACCAAAAATACAT-AAAGTCATGTCATAAACG-AC-AAATGCAAAGA-TTTG-GAAT-C-----CTCAT--------------------ATGTTCAGTTGCTCTT--ATAATTAGAACCATTTTCGCGGGA-CCTACC-TGCG-AAA-CTAATA-GAATTAGCTACCTCTTAGAT--T-TAT--TAGTGACG-CCATT-C-ATTA-CCAGATT-T-CAGAA-TTACATCAGATAAACCG-TAA-ACT-TTCTTATTTCAC--TTCCAGAGGAAA----TTAACTCGGAATC-CATATTAGTCTCA-TTTGATGC-CACGAAC-----CTCTA-TT-CT-AA---T--ATTCGTC-ATAAACTCGGACTAGCCACCAATGAATATTGGATGGACTGTTTTCC-CCA-TCTTTAACTCG-AGATATT-T---CCT------AAAGAATTCG-----TCA-TATCAAGTC-TGAAATTAAT-CTAGAAAATAAC-ATCATGTATTTT---GATGAAACTAT-TTACAGACAGAAGCTTGAC-ACTGTCATGTGAACCAAAGTTGCTCCAAGAGAAATTAT--CTACA---GTTC-----------------GAGAAA-----------CATTTGG-ACAAGA-CTCTG--AAAACTTT--------------TTGAAACAATCGTTGAACTTTTTTTTTGACGATTGTT-TTATCATTTGGGCCAGAGGAGAGGACCAATT--AATGGAGT-TTT-TC-AATATTCTTAATA-C-GCTAAGTCCTACCATGAAATTCACCATGGGATC-------------CA---------ATAGAAATATGTTGTCATTTCTTGATGTCATGGTTATTAAATGAGAGTACCG---CATAGTAACAGACGTGTTCTGCA-AATTAACAGA-TACCAGACAATACCTTAT-GCTTCATTAC-TGTTACCCTTAAG-ATGCT-----ACAATA---GTCCATACAATTTGGCAAAAC-GTCTATGCA-CAA-TCTTTTCTTATGCTGAAA-TCC--TCAAAAG--TCGCTTAGCAAAATTACAG
gi|14 : aatatagaagaaataaccCTGATGCTGAAAATCC--TCAATATAGTCGCTTGGCGGAATTACaatgcattattacaacgacgttaccaagtgcaattaattaaaaacggtttcaacaaagctaaatcccaggatagaaaggttcttcaagtaaaatccaaacctcgtca
gi|16 : CTGATGCTGAAAATCC--TCAATATAGTCGCTTGGCGGAATTACtaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatcacaacatcaactttctacatcctcat
gi|17 : GCATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTTTG---AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTTGG-ACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAA-ACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-Ttaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatca
gi|18 : CATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTTTG---AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTTGG-ACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAA-ACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-T
gi|19 : AATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCC-ACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATCAGAGTAA-TTTTATGCCCCCC--------AAAGG-----ACGC--A---------AATGG--TA-AATTTAGATAA-TTCATCGACTACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTACTA-CAA-A-AAATAACGTTAACAAATCCGGAATGG--T-----TTGAAAA----AGAT-AAT-AC-ATCA-AT--CATAAT-A
gi|2 : aatatagaagaaataaccAACGACGCGGACGCATTTTGTAGACGATTACGA-CTAGCT-AATTTTTCTTG-GTAAGGAAAATG---ATGACG-CATCTATT-TTGCCAACAAAAGTAA-TTT-ATGCCCCT----------AAGGTAGAAACC---ATAAATAATTAAC-A--T-TAATTTAGATAAATTTGTTAG-TACAGTACAATAATTTCCTGTTGAACAACTT----AAT-GCAAATTG-TGTCAA---AAACAATTTTAAAAAGT-CGGAATGGAATGCT-ATTGAAAACT-TAAA-AAATGACGATAACAT--CATAATCAAG-GAAGCCG-ATAAAG----GTGGTGC-AGTTGTTATAATGGACCGAAA-TTATTG-TAAAA-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AAAAAAA-AA--AAAA---AAAG-CAAACATA---TGA-TTC---TAA-A-GAA-GTCATG-AAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAAA-GAAA-CTGATTACCTA----CTCTCG----TTTGATGTTAA-AAC---CAGTATTTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTAACG-AT-AAATGCAAAAA-TTCC-GATT-C---ATCATATAT---AA---GT-GTTGA-AA-GCCCAACAGACCTC--AAAATCAGACCTATAGTTGCGGGA-CC-ATCATGTG-AAA-CTCACAG-AATTAGTTATCTAATATAT--G-TAT--TA-TCAAA-CCCTTAT-GTTG-ATAAGGC-T-CAAAG-TTACATAACAGATACGA-TAG-ATT-TTCTAAA--CACTCTTCCCGGAAAAG----TCAACACGGAATC-AATTTTAGTGTCA-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATTTCAC-ATGAACTAGGATTACCCGCCATAGAACATTGGATAGACAGATTCCC-AAA-TCTTTTAAACG-ATAGATT-T---CCT------AAAGAATTTG-----ATT-TAAAAAGTC-TAAAATTAATCCTAGAGAACAAT-TTTATGCATTTC---AATGAAATGGT-TTACAGACAAAAGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCC-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AAGAAAAATTGTACTCTGTTGTTAAG-GAAAAG-TTCGGACAAAACTTT-G---AAACTTCTATTAGAACA-TCATGGACACGCTATTTAGACGACTTTT-TTATCATTTGGGACAAAGGTGAAGATCAACTAAAAC--AAT-TTT-TTG-ATATTCTAAACT-CT-CTGAGCCCTACAATGAAATTTACAATGGAATC-------------GG---------ATAGAAATCAGCTAGCATTCCTTGACGTGATGGTGATGAAAAAAGAA-A--GTAACATTGTAACCGATATCTTCTACA-AAATAACGGA-TACCAAGCAATA-CTTAT-TATTTGATTCGTGCCACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAT-GTCTTTGTA-CAA-TAATATCAGACACTACAA-TTA--TCAATAT--TAGTCTCGCGGAATTAGAG
gi|20 : C-CAT-TGAGTCTTA-ATTGATGC-CACAAACACCAATCCTA-ATACT-AG---T--ATTTCTC-ATAATCTAGAATTAGCCGCCATAGAATAATGGATATGCTGATTTCC-TAA-TCTTCAACACG-TGAGATT-TTCACCT----------CATTTG-----TTA-CATCGGGTG-TACAATTAATCTTGGAAAACAAT-TTTA------------ATGAAAATGT-TCACAAACGAATGCTGGCC-ACTGCGATAGGAACAAAA
gi|22 : acaggattagTA-AT-CTGAA---T--TTTCCAT-ATGATATAG-ATTAGTCACCGTAGATCATTGCGTAAAA---------AAG-TCTTATGCATG-ACAGATT-T---CCT-------AGGAATTTA-----TTT-TCAATTGTC-TACAGTT-------------GAT-TTCATTCATTTTAAAAATGATATGAT-TCATATACAAAAGTTAGGT-ACTGGGATGAGATCCAAAGGTGTGCA-----GACCTGTG-GAACACTCTTTTT--GGGATGTTT
gi|24 : TTATAT--T-TAT--TGCTGAAA-CCATT-C-ATCA-CCAAAGT-T-AAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-------------------AACTCGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---T--ATCCCTC-AAGACCTCGGACTAGCCGCCATTGAATATTGG
gi|25 : cAATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATAAGAGTAA-TTTTATGCCCCCC--------AAAGG-----ACG---A---------AAT-G--TA-AATTTAGATAATTTCATCG
gi|27 : aatatagaagaaataaccATGGATTTT---GATGAAATTAT-TTA-----------TAGGC-ATGGCAATGGGAACTAAAGTTGCGCC-----CATTTATG-TAGCA-TCGTTTC--AGACTTTTTAC-CAAAAAA---ATACTCTAC---TAAA-GGAAAA-TTCACACAACATTCT-GTGCAAAC
gi|28 : CCAC-TTGAACTAGGATTTACCGCCATAGAACATTGAATAGATC----TCC-AAA-TCTTTTAAATG-ATAGATT-T---CCT------AACGAATTTG-----CTT-TAAACAGTC-TAAAAAAAATCCTAGAGGATAAT-TTTATGTATac
gi|29 : TCTATTGTAGCCAACAAAAGTAA-TTGTATGCCCCCT--------AAAGGT-G----G---A---------AAC----CATAATTTAGATAAATTTGTCAG-TACAGTACAACAATTTCCTGTCAAACA
gi|3 : TTGACAGA-TACCAAGCAATACCT-AT--GTGTCATCC-T-TCACCCAAAACCATACT-TAAAACAATAATATTCCATACAATTTGGCAAGACTGCCTCTGCA-CAATTAGTTTCTGATGCTGAAA-TCCGTCCAATAG--T-G-CTTGCGGA
gi|32 : atAATTTTCTCAATA-C-ACCAAATCCTACCATGAAATGCATCATGCAATC-------------CA---------TTAGAAACATGttgagcagatgccgactactacaacgagttacccagtacaatttaatcgaaaactgtgtattcgaaacaaagctaaatctcggaaagaaggatcttctttcagtagaaccaaacctgcgtcactagtgctttactccaactttcaaaagcacaattccaaaaaattcggaagtttttcaggttattaatatataacctcgccattttggaagaagacccagatttgaaaaagaaattactggaacaacataaatcatcaaaatgaaacgtcaaagcccttcatcttcaaatctcttctaaccagagcagtttttacaacaccagcagtgataattcccttattgtcaagcaaatgtagataaacccaaagtgcgctccccgtgccctaatttaacttactaacacttggatctcatttattttcaaaaacggagcagtgttatattatacaggaaatcatccatgacgtgccctcttctcaacatctttatgtgtaataactgtgcgaccgcgctgctggaggaaaattacatcggctcagacagcgaacctttacgtcacagcgatggactgtccaccgtcaaccaataagagaaccaaaataccagtgtaccaaagtcatggaaatattcgaaaactgtgcgcaaaacattgtcagtccgaactgtctaaccagttttccccttattacaaattcttgaaagatacacgtggaaacagaaacgtgaaacaaaagaaaactgttctattcgaggatacaataacctgcgtaaatgctgcactacttgtaaacttctctgaaaattatttttcagggaacttgccccgcatttaacgtaaaggtcaaattgtatttacagtaatcaattgtcatatttatattatgtttaaacagtccccttactcattgtacatactatgtccctacccccctaatcccccccattagatgattactaaataattggtaccaatttatgcatatgccctggctattattattcttacatatactaaccgattttgtatacttttggtaatgtgcgcaacttaaggtgcgaattcccccccc
gi|4 : AACGACGCGGACGCATTTTGTAGAAGATTACGA-CTAGCTGAATTTTTCTTAGATAAGGAAAATG---ATGACGCAA-----------CAACAAAAGTAAATTTTATGCCCCCA--------AAAGGT-AGAAAGTTCA---------AAC----CATAATTTAGATAAATTTGTTAG-TACAGTACAACAATTTCCTGTCCAGCAACTTTTAAAAT-GCAAATTG-TG-T--CAGAAACAATTTCAATAAGT-CGAAATGGAACGCT-ATTGAAAACTTTAAA--AATGACGTCAACATATCATAATCAAG-GAAGCCG-ATAAAG----GTGGCGC-AGTTGTTATAATGGACCTCGA-TTATTA-TAAAT-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AATACTA-TG--GGAA---A-AGTCAAACATA---TGA-TTC---TAA-A-GAA-GTAATGAAAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAAA-GAAA-CTGAATACCTA----CTCTCG----TTTAATGTAAA-AAC---CAGTAATTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTACAG-AT-AAATGCAAAAATTTCC-GAGT-TCAAA-CATATATAAAAA---GTGGTTGA-AA-GCCCAtcct
gi|5 : cttttcaaattctaatgaaaatgtggaaaaatgaatgtttgtgcgaggaactaaaatccatagaacgatggataaaatccgataaatggtttcaaagttacgaagcacaatttaaaaaagaacatcaagacaaaaatcccttcataaaatcaggtaaattccagccagacaacataaataggaaggagacaaacaggtaccaacccacggtagaatccaacttaaaccgcagaaaatatccgtcaagccggaaccagacggatgacaatattagacaccagggacgcccacagatccctttccacgagcgaccatacaaacggaacaacaatcggcagggaagtattatcacgcgcaaaaattcttttttaggatatggccccagacaaaacgatattagatagcacaaaatatagaaaaagacctgaaacctgacattaaagttactaatttatatatctaacgaatattaacagaaaatgaaattaatgtacttgaaaaaggacttatattcacccccaccccgcgcataaaaaatacagaggaaattaaaAATGACACGAGCGCG-TTTGCAGAAAGCTACGTATTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATATGA-TAA-TTTTATGCCCCCC--------AAAGG-----ACG---A---------AAT-GGTTA-AATTTAGATAATTTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACCAAAAAATTA-TA-CAACA-AAATAACGTTAACAAATCCGGAATGG--T-----TTGAAAA----AGATAAAT-AC-ATCA-AT--CATCAT-AAA-GAAGCGGAATATAGCAGTGCTG-GCTAGTCGGTA-GATGGACCGTGGTGTATT--TAA---CAATATATCTTAGGTGTGCCGTGCCTC-GAGAACAGAATTACATTACCGGTAGAAACCACAG-CGAGAGTACGTTGACCTCATATAACA-GAGTGTCTTGCAAAAAACTTGAAAAATACATTGTCCAATGAA-ACGGG-AGTAACACTTACAATCAAGAGAAATCAGA--ATCTACACTCTCTTGAGAATTTAAAGCGAACAACAAGGAGTAACTTTTCTATTGCGTTTCCAAAAATACATAAAAGTCAAATCAT-AACGTACTAAAGTTAAAAA-TTCGAGAAT-C---A-CACCTAT---AATATGT-ATTGACAATGTCCAGATGATCTTAAAAAATTAGCCCAATTGTTGCGGGACCC-ACC-TGCGAAAA-CCGACAGGAATTAGTTCTCAATTATAA--T-TATTGTGCTGAAACCCATT-C-ATCA-CCAAAGTATAAAAAG-TTACATCAGA-ACACCGTTAGTACTGTTCTAAATTCACT-------------------AACTCGGAATCTCATA-TAGTCTCATTTTGATGTGCACGAAC-----CTCTATCT-CT-AATTCT--ATCGCCT-AAGACC-GGGATGAG-CGCCATTGA--ATTGATTAGACCGTTTTCCTACATTCTTTTACACGAAGAGATTGT---TCTGATATAAGAGAATTTGCACTCATC-TATCAAGTCTTAAAATTAATTGTTGGAAACAAG-CTT---CATTGC---AATaacagacatcaaaa
gi|6 : aatatagaagaaataaccAATGACACGAGCGCGTTT-GCAGAAA-CTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACA-GAGTAA-TTTTATGCCCCCC--------AAAGG-------A---A---------AAT-G--TA--ATTTAGATAA-TTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-T----ATTGAAAA----AGATAAATAACAAT--CAT--CATAA----A-GAAGCGG-ATAA-G----GCAGTGCTGGTAGTCGTAATGGACCGTGA-GTATTAACAAATTCATTATGTCT------TGCCGTG-CTACGAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-AAGAG-GTCTTGCAAAAAACTTGAAAAATACATCAC-TGAT----ACGGA--GTAA-ACTTACAATCAAG-GAAA-AATCTTACCT-------TTTGAG-ATTTAAAGTGAA-AAC---AAGTAACTTT--TATGGT-TTACCAAAAATACATAAAAGTCAAATCATAAACG-AC-AAATGTAAAAA-TTCG-GAATCC---A-CATATAT----A---GT-ATTGA-AATGTCCAGATGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAACCCAACAGGAATTAGT--TCTCTTAGAT--TATAT--TGCTGAAA-CCATT-C-ATCATCCAAAGT-T-AAAAGTTTACATCAGAGA-ACCG-TAGAACT-TTCTAAATTCA----TC--------A----T-AACTCGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---TAAATCCCTCAATGACCTCGGACTAG-CGCCATTGAATATGGGAT-GACCGTTTTCC-TCA-TCTTTTACACGAAGAGATT-G---TCTA-----AAAGAATTTC-----ATCATATCAAGTC-TTAAATTAATGCTTG-AAACAACATTTATGCATTT
gi|7 : aatatagaagaaataaccGTTGT-TATTAGATGAT-TAT--T----AAA-TCTTT-AAGTTG-ATAAGGT-T-CAAAG-TTACATAAGAGATACGG-TAT-ATT-TTCTAAACACAAT-TCCC-----AAAACAGTCAACACAGAATC-AATTTTAGTTTTG-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATCCCAC-ATGGACTAGGATTAGACGCCATAGAACATTTGATAGATAGATTTCC-AAA-TCTTTTAAATG-ATAGCTT-T---CCC------ATAGAATTTG-----TTT-TAGAA-GTC-TAAAATTAAACCTAGAAAACAAT-TTTATGCATTCC---AATGAAATGCT-TTATAGACAAAGGTTAGGT-ACTGAGATCGCAACTAAAGTTGCGCC-----GATTTATG-CTACACTCGTTGT--AGGATTTTTAG-AAAAAAAATT-TACTCTGTT-TTCAAGGAAAAG-TTTGGACAAAAC--T-G---AAACTTTTATTAGAACA-TCATGGAAACGCAATTTTGAC-ATCTTTGTTATCAATTGGGACAAAGGTGAAAATCAACT----C-AAATATCTGTTGGGTATTCCAAATT-CT-CTGAGCCCTACAATGATATTTACAATGGAATC-------------GG---------ATAGAAAT---CAG-CATTCCTTGACGTTATGGTGATGCAAAAACAA-A--GTAACATTGTAAGCTATATCTTCTACA-TAATAACCGA-TACCAAGAAATAC----T-TATTTCATTTGTGCCGCTCTAAAC-ATACC-AGAAATAATA---TTCCATAAAACTTAGCAAGGC-GTCGTTTTA-CAA-AAATATCAGACACTAAAT-TTC--TAAATAT--TAGTCTTGCGGAATTAT
gi|8 : ACAAAGTC-TAAAATTAATTTTAGAAAACAAT-TTTATGCATTTC---AATGAAATGGT-TTNCaaaattacttctgcaaagaagctaccttaactaagaaag
gi|8 : C-TAAAATTTATCTTAGAGAACGAT-TTTATGCATAAC---AATGAAATTGT-TTATAGACAAAGGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCT-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AA-AAAAATGGTACTATGTTG-TCAA-TAAAAAGTTCGGATAAAACTTT-G---AAACCTTTATTAGACCA-TCATGGAAACGCTATTTACACGACTGTT-TTATCATTTGGGATAAAGGTGAAGATC-----------------T-TTG-ATATTCTAAACT-CT-CTGAGCCCTACAATGAAATTTAAAATGGAATCGGATTTGTTACTTCGCCATTTTATATAGAAATCAGCTAGCATTCCTTGACGTTATGGTGATGAAAAAATAA-A--GCAACATTGTAACCAATATCTTCTACATAA--AACGGA-TACCAATCAATATC-TAT-TATCTGATTCATACAACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAC-GTGTTTGTA-CAA-TAATATCAGACACTGAAA-TTC--TAAATAT--TCATCTCGCAGAATTAGAGtaaaatttatcttagagaacgattttatgcataacaatgaaattgtttatagacaaaggttaggtactgcgatgggaactaaagttgcgctgacttatgcaacactcgtcttaggatttttagaaaaaaatggtactatgttgtcaataaaaagttcggataaaactttgaaacctttattagaccatcatggaaacgctatttacacgactgttttatcatttgggataaaggtgaagatctttgatattctaaactctctgagccctacaatgaaatttaaaatggaatcggatttgttacttcgccattttatatagaaatcagctagcattccttgacgttatggtgatgaaaaaataaagcaacattgtaaccaatatcttctacataaaacggataccaatcaatatctattatctgattcatacaaccctaaacataccagaaataatattccatataatttagcaagacgtgtttgtacaataatatcagacactgaaattctaaatattcatctcgcagaattagagaaattactactgtaaagacactatcctaaaaagataattaaaattgaaattaacgaagcaaaatcacatgaaagaaaggacctcctta
13 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): TCATTCATGACGTGCACCTCTTCCAACATCTTGTATGTAATAACTTGTGCAGGCTGTGGAGAAAATTACATCGGCCAGACAGGCGACACCTTACGTCACAGGATGACTGTCCACCGTCAACAAATAAGAGAACCAAAGTACCAGTGTACTAAAGTCAGTGAACATATTCGAAACTGTGCCAAAAATTATCATCCGAACTTTACCGTTTTCCTCTTTTACAAATTCTTAAAAGATACCACGGAAACAGAACGTGAAACAAAAGAAAAACTGTTTATTCGAGGATACAAACCTGCGCTAAATGCTACACAATTGTAAACTTCTTTGAAAAATTATTTTCAGAAACATTCCCCCGCATTATACGTAAGGTCAGAATTTATTTACAGTAATCAATCTGTCATATATTATGTTTAAATGTCCCCCTACTACAATTGTACATACTGTGTATTGTATATGTCCCCCCCCCCTTTCCTCTTTCTCCCTTCCATTAATATTATAAATATTGTACAATGCATGCATGCCCTCTTATTATTATATATTCTTACCATTTTGTATATTTCAATATTTGTGTAAAGTATGGCGACCCCCCC
Unaligned ( gi|10 ): CTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACCAAAGACAAAAACTAGGAGCTTCAACCATAACAAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCGTACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAAACACCACAACGTTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGAACCCAACCGAATTTTGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATTCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCCACACCACGCCAAAA
Unaligned ( gi|11 ): AACTTTCTACATCCTCCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACGAGATGGGGAAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACAAAAGACAAAAACTAGGAGCCTTCCACACCATTAACAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCTCACCACAGCGTTCCCGGACAATATGATTAGGAGCGGAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGACCCAACCGAATTTTGATAGCAACAAAACAAAGAACAGGAGAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCACACCACGCCAAAA
Unaligned ( gi|12 ): TTTCACATCCTCATGAAAAATGGAATGATGACTTTTTGTGAAGACAAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAAACCCAATTCAAAAAGGAACACACAAAGACTAAAAAACTAGGAGCCTTCAACCAGTAACAAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAAGACATCACCAACGATACAGAAAACAGCGTTGAAACACCACAACGTCTAGAAATTTTTTTTTAGGATATGGCCGCAGAACCCAACCGAATTGGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAAATAATAAATGTATCAAAACGGACATTGACTGATCATGAAAATTAGGATACGTTGAAAAAGGACTAAAATTCACTCCCACACCACGCCAAAA
Unaligned ( gi|13 ): AACTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCAATTCAAAAAGGAACACAAAGACAAAAACTAGGAGCCTTCCAACCAAGTAACAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTCTTTTTTTAGGATATGGCCGCAGAACCCAACCGATATTGATAGCAACAAAACAAAGAACAGGAAAAACCAACCCATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCTCACACCACGCCAAAA
Unaligned ( gi|15 ): ATCTAACAAGAGCCTGTTTTGCTAGTCAACATTAAAGATTTTCCCGTCAATCACTAAATGCTACAAAACCCAACATGCGCCTACGTGCAAATACAGAAACTCAAGGATCCGAATTTAGATTTTCAAAAAACGGCCAGTAGAATTTACAGTAAAATCATCAATCACATGTGTTTCGTTCCAATCTGATATATGTTATTACCTGCCGCCGGGGACGTGGTGAAAATTATTTATCGATGAGACACGGACACACACTAAGGACATCGGCGATTTGACCGAATTTCACCGAAAAAAACCAACCGAGAACCTAAATATCAGTGTTTACCACATCCTAAATTGTTGCCAAAAATGTCTATCCGAATTTTACAGTTCTTTCATCTTATAAATTTCGTCAAGAACCACGACAGAAAAAGAACGTGGAAAACCAAAGAAAAACTATTTATTCAAAAAATATAAACCACTTCTAAACTGCAAC
Unaligned ( gi|21 ): CAGTCATGACGTGCACCCCCCCCCCCAACATTTAATGTATCATTATTTGCGCCGACTGTAGATAAAATTACATCTGTCAGACAGGCAAAACACTATGATATAAGATGACTGTGAACTGTGAACAAATAAGAGACAGTGAACATATTCAAAATTATCTCAAAATCTTAATCCAAACATTATCACTTTCTCTGGACAAATTCCTAATATATCATATA
Unaligned ( gi|23 ): GTATATCATTACTTGCGTCGACAGTAGAGAAAATTACGTCAGTCAGACAGGCGAAACGCTACAATATAAAATGGCGAAGTAACAATGTATTAATATAAAATGACGGTGCACTGTGAACAAATAAGAGACAGTGATCATATTCAAAACTATGTCAAAATGATTTTTCAAAACATTATCACTTTACAAATTCCTAATATACATACATCA
Unaligned ( gi|26 ): TATCAGTGTACCCATGTAAGCAAATTAACACATCCGAAATTGCGCCAAAAATGTTTATCCAAATTTTACCATTTTTCCATTTTATAAATTTCATAAAGACACAACAGAAAAAGAAACTTTTTTTTCAAAAATATAAAC
Unaligned ( gi|30 ): GTAAACTTCTTTGAAATTTTATTTTCCGAACATTTTCCCGCATTATACGTAGGTCAGGAATTTAGTT
Unaligned ( gi|31 ): ATATACAGTAAAATCATCAATGACATGTGTTCGTTCAAATCAGATCTATGTTATTACCTCCGCCGG
Unaligned ( gi|33 ): ACCCTAAAAAATTTATTGAAAATGGAATTAATGAAGGAAAATCACATGAAAGAAAGGACCTCC
Unaligned ( gi|34 ): TGAAGAAAATTCATTAATCGGAATGTTGAGGAGTTGTTCAG
Alignments
lowQualScore : 11111111 66666666666666666666666666666666666 1 1111 111 1 5555555 3333 11 111111 2 1111 11 11 222222 11 111 111 111 333 1 2222 111111 22222 1111 111 11 2222222 222222222222 1 11 1 1 1 1 1 1 1111 11111 1111 1 999999999999999999999 11111 111 1 2222222 111111 11111 1 11 1 11111 11111 1 2222222 2222 555555555555555555555555 11 1 111 1 111 111 1 1 11
lowQualScore : 1 1 5 1 5 3 999 5 6 5 88888888 1 99999999999999999999999999999999999 0 5 1 1 6 0 1 4444 77 6 6 666 3 8888888 6666 44 9 777777 99 0 8 0 7777 1 6 44 1 6 4 99 11 999 1 333333 1 8 8 99 8 11 444 5 8 1 444 8 444 8 8 8 1 55 0 000 8 0 1111 8 0 0 8 111111 22222 9999 1 8 444 11 8 0 0 8 8 8 8 8 4444444 0 999999999999 8 0 1 33 0 0 0 0 0 0 4 5 44 0 1 0000 00000 6 0000 77 6 77 6 2 7 6 3 6 1 333333333333333333333 5 5 5 1 5 44444 77 5 5 888 66 1 4 1 0 5 1 000 55 5 0 1 5 888 2222222 333333 66 22 1 4 3 0 4 7777 11 8 44 8 0 5 22222 1 0 4 6 33 9 0 1 1 888 1 11111 5 0 5 88888 3 7 1 1 6 1 6 7 1 0000000 6 6 7 1 7777 0 0 000000000000000000000000 66 7 1 1 1 6 77 3 6 1 2 1 6 5 2 1 22 333 1 0 7 1 5 333 000 9 5 0 1 5 1 1 1 77 55 4 4 1 1
lowQualScore : . . . . . . ... . . . ........ . ................................... . . . . . . . .... .. . . ... . ....... .... .. . ...... .. . . . .... . . .. . . . .. .. ... . ...... . . . .. . .. ... . . . ... . ... . . . . .. . ... . . .... . . . . ...... ..... .... . . ... .. . . . . . . . . ....... . ............ . . . .. . . . . . . . . .. . . .... ..... . .... .. . .. . . . . . . . ..................... . . . . . ..... .. . . ... .. . . . . . . ... .. . . . . ... ....... ...... .. .. . . . . . .... .. . .. . . . ..... . . . . .. . . . . ... . ..... . . . ..... . . . . . . . . . ....... . . . . .... . . ........................ .. . . . . . .. . . . . . . . . . .. ... . . . . . ... ... . . . . . . . . .. .. . . . .
lowQualScore : 4 4 0 7 7 0 999 7 5 0 11111111 4 11111111111111111111111111111111111 8 7 0 3 6 7 0 2222 33 7 7 555 3 8888888 3333 88 3 333333 22 0 0 8 0000 4 4 44 0 0 6 00 88 888 4 000000 4 0 0 00 0 00 000 0 0 0 000 0 000 0 0 0 4 88 6 888 0 0 4444 0 6 8 0 000000 66666 2222 4 0 000 00 0 6 8 8 0 0 0 0 0000000 8 666666666666 0 6 0 88 2 0 0 0 0 0 2 0 44 6 0 8888 55555 7 8888 33 7 77 7 5 8 7 3 7 7 555555555555555555555 7 4 7 4 7 33333 22 0 0 888 99 0 4 0 7 7 0 444 55 0 0 0 0 888 6666666 555555 22 77 0 0 2 1 0 4444 11 0 88 9 1 6 55555 0 0 2 5 88 2 5 4 7 444 9 99999 7 6 7 66666 7 7 0 0 7 0 7 3 0 0000000 7 7 1 0 4444 7 7 666666666666666666666666 77 2 0 0 0 7 55 7 7 0 5 0 7 4 7 4 99 999 0 4 1 0 7 666 000 3 7 4 4 7 4 0 4 99 77 3 0 0 0
consensus : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATG--------CCCCCCAAAGGTACG-AAAC-----G--T-------A--------TAATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-TG-T-ATTGAAAA---TAGATAAATGACGATAACAT--CATAAT-AAAGAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAATACATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCTA----CTCTCGAG-ATTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAAT-C---A-CATATAT---AA---GT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-TTCC-----AAA----TCAACTCGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTGCNGTTCGA-GAAAAA-TTCGGACAAAACTTT-G---AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAA-ACCGCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
Reference ( family-1323 ) : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATG--------CCCCCCAAAGGTACG-AAAC-----G--T-------A--------TAATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-TG-T-ATTGAAAA---TAGATAAATGACGATAACAT--CATAAT-AAAGAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAATACATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCTA----CTCTCGAG-ATTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAAT-C---A-CATATAT---AA---GT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-TTCC-----AAA----TCAACTCGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTGCNGTTCGA-GAAAAA-TTCGGACAAAACTTT-G---AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAA-ACCGCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
gi|1 : AATGACACAAGCGGGTTTTGCAAATAGCTACGT-TTGGCTGAAATTTTCTTATATCACGAAGA------AGACG-AATCTGTTGTTACAAACA--AGTAA-TTATATGCCCCCCCCCCCCCCGAA-----G-AAAC-----G--T-------A---------AACTTGGATTATTTCATCAA-TACTGTAAACCA-TTTCCCATGGAGAAACCT----ACC-AAAAATCA-TA-CAAC--AAGTAACGTTTATGTAT-CGGAATGGACTG-TCATTGAAAA---TGAAAAAAAGATAACAGTAT--CATCATAAAAGAAACGG-ATAAAA----GCAGCTCT-GAAGTTGAAATGGACCGTGA-ATATTA-CAAAT-CATTGTGTCT------TGCAGTG-CTA-GAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-A-GAA-GTCTTGC-AAAAACTTGAAAAA---ATCAT-CACTGAAAATGAAGA-TAA-ACTAACAACC-AG-GAAA-CATCTTGC-------CTTTTGAG-ATTTAAAACGAA-AAC---CAGTAACTTT--TATATT-TTACCAAAAATACAT-AAAGTCATGTCATAAACG-AC-AAATGCAAAGA-TTTG-GAAT-C-----CTCAT--------------------ATGTTCAGTTGCTCTT--ATAATTAGAACCATTTTCGCGGGA-CCTACC-TGCG-AAA-CTAATA-GAATTAGCTACCTCTTAGAT--T-TAT--TAGTGACG-CCATT-C-ATTA-CCAGATT-T-CAGAA-TTACATCAGATAAACCG-TAA-ACT-TTCTTATTTCAC--TTCCAGAGGAAA----TTAACTCGGAATC-CATATTAGTCTCA-TTTGATGC-CACGAAC-----CTCTA-TT-CT-AA---T--ATTCGTC-ATAAACTCGGACTAGCCACCAATGAATATTGGATGGACTGTTTTCC-CCA-TCTTTAACTCG-AGATATT-T---CCT------AAAGAATTCG-----TCA-TATCAAGTC-TGAAATTAAT-CTAGAAAATAAC-ATCATGTATTTT---GATGAAACTAT-TTACAGACAGAAGCTTGAC-ACTGTCATGTGAACCAAAGTTGCTCCAAGAGAAATTAT--CTACA---GTTC-----------------GAGAAA-----------CATTTGG-ACAAGA-CTCTG--AAAACTTT--------------TTGAAACAATCGTTGAACTTTTTTTTTGACGATTGTT-TTATCATTTGGGCCAGAGGAGAGGACCAATT--AATGGAGT-TTT-TC-AATATTCTTAATA-C-GCTAAGTCCTACCATGAAATTCACCATGGGATC-------------CA---------ATAGAAATATGTTGTCATTTCTTGATGTCATGGTTATTAAATGAGAGTACCG---CATAGTAACAGACGTGTTCTGCA-AATTAACAGA-TACCAGACAATACCTTAT-GCTTCATTAC-TGTTACCCTTAAG-ATGCT-----ACAATA---GTCCATACAATTTGGCAAAAC-GTCTATGCA-CAA-TCTTTTCTTATGCTGAAA-TCC--TCAAAAG--TCGCTTAGCAAAATTACAG
gi|14 : aatatagaagaaataaccCTGATGCTGAAAATCC--TCAATATAGTCGCTTGGCGGAATTACaatgcattattacaacgacgttaccaagtgcaattaattaaaaacggtttcaacaaagctaaatcccaggatagaaaggttcttcaagtaaaatccaaacctcgtca
gi|16 : CTGATGCTGAAAATCC--TCAATATAGTCGCTTGGCGGAATTACtaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatcacaacatcaactttctacatcctcat
gi|17 : GCATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTTTG---AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTTGG-ACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAA-ACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-Ttaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatca
gi|18 : CATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTTTG---AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTTGG-ACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAA-ACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-T
gi|19 : AATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCC-ACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATCAGAGTAA-TTTTATG--------CCCCCCAAAGG-ACGCAAATG----G--T-------A---------AATTTAGATAA-TTCATCGACTACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTACTA-CAA-A-AAATAACGTTAACAAATCCGGAATGG--T-----TTGAAAA----AGAT-AAT-AC-ATCA-AT--CATAAT-A
gi|2 : aatatagaagaaataaccAACGACGCGGACGCATTTTGTAGACGATTACGA-CTAGCT-AATTTTTCTTG-GTAAGGAAAATG---ATGACG-CATCTATT-TTGCCAACAAAAGTAA-TTT-ATG--------CCCCT--AAGGTA-G-AAACCATAAA--T-------AATTAACATTAATTTAGATAAATTTGTTAG-TACAGTACAATAATTTCCTGTTGAACAACTT----AAT-GCAAATTG-TGTCAA---AAACAATTTTAAAAAGT-CGGAATGGAATGCT-ATTGAAAACT-TAAA-AAATGACGATAACAT--CATAATCAAGGAAGCCG-ATAAAG----GTGGTGC-AGTTGTTATAATGGACCGAAA-TTATTG-TAAAA-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AAAAAAA-AA--AAAA---AAAG-CAAACATA---TGA-TTC---TAA-A-GAA-GTCATG-AAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAAA-GAAA-CTGATTACCTA----CTCTCG----TTTGATGTTAA-AAC---CAGTATTTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTAACG-AT-AAATGCAAAAA-TTCC-GATT-C---ATCATATAT---AA---GT-GTTGA-AA-GCCCAACAGACCTC--AAAATCAGACCTATAGTTGCGGGA-CC-ATCATGTG-AAA-CTCACA-GAATTAGTTATCTAATATAT--G-TAT--TA-TCAAA-CCCTTAT-GTTG-ATAAGGC-T-CAAAG-TTACATAACAGATACGA-TAG-ATT-TTCTAAA--CACTCTTCCCGGAAAAG----TCAACACGGAATC-AATTTTAGTGTCA-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATTTCAC-ATGAACTAGGATTACCCGCCATAGAACATTGGATAGACAGATTCCC-AAA-TCTTTTAAACG-ATAGATT-T---CCT------AAAGAATTTG-----ATT-TAAAAAGTC-TAAAATTAATCCTAGAGAACAAT-TTTATGCATTTC---AATGAAATGGT-TTACAGACAAAAGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCC-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AAGAAAAATTGTACTCTGTTGTTAAG-GAAAAG-TTCGGACAAAACTTT-G---AAACTTCTATTAGAACA-TCATGGACACGCTATTTAGACGACTTTT-TTATCATTTGGGACAAAGGTGAAGATCAACTAAAAC--AAT-TTT-TTG-ATATTCTAAACT-CT-CTGAGCCCTACAATGAAATTTACAATGGAATC-------------GG---------ATAGAAATCAGCTAGCATTCCTTGACGTGATGGTGATGAAAAAAGAA-A--GTAACATTGTAACCGATATCTTCTACA-AAATAACGGA-TACCAAGCAATA-CTTAT-TATTTGATTCGTGCCACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAT-GTCTTTGTA-CAA-TAATATCAGACACTACAA-TTA--TCAATAT--TAGTCTCGCGGAATTAGAG
gi|20 : C-CAT-TGAGTCTTA-ATTGATGC-CACAAACACCAATCCTA-ATACT-AG---T--ATTTCTC-ATAATCTAGAATTAGCCGCCATAGAATAATGGATATGCTGATTTCC-TAA-TCTTCAACACG-TGAGATT-TTCACCT----------CATTTG-----TTA-CATCGGGTG-TACAATTAATCTTGGAAAACAAT-TTTA------------ATGAAAATGT-TCACAAACGAATGCTGGCC-ACTGCGATAGGAACAAAA
gi|22 : acaggattagTA-AT-CTGAA---T--TTTCCAT-ATGATATAG-ATTAGTCACCGTAGATCATTGCGTAAAA---------AAG-TCTTATGCATG-ACAGATT-T---CCT-------AGGAATTTA-----TTT-TCAATTGTC-TACAGTT-------------GAT-TTCATTCATTTTAAAAATGATATGAT-TCATATACAAAAGTTAGGT-ACTGGGATGAGATCCAAAGGTGTGCA-----GACCTGTG-GAACACTCTTTTT--GGGATGTTT
gi|24 : TTATAT--T-TAT--TGCTGAAA-CCATT-C-ATCA-CCAAAGT-T-AAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-------------------AACTCGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---T--ATCCCTC-AAGACCTCGGACTAGCCGCCATTGAATATTGG
gi|25 : cAATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATAAGAGTAA-TTTTATG--------CCCCCCAAAGG-ACG-AAAT-----G--T-------A---------AATTTAGATAATTTCATCG
gi|27 : aatatagaagaaataaccATGGATTTT---GATGAAATTAT-TTA-----------TAGGC-ATGGCAATGGGAACTAAAGTTGCGCC-----CATTTATG-TAGCA-TCGTTTC--AGACTTTTTAC-CAAAAAA---ATACTCTAC---TAAA-GGAAAA-TTCACACAACATTCT-GTGCAAAC
gi|28 : CCAC-TTGAACTAGGATTTACCGCCATAGAACATTGAATAGATC----TCC-AAA-TCTTTTAAATG-ATAGATT-T---CCT------AACGAATTTG-----CTT-TAAACAGTC-TAAAAAAAATCCTAGAGGATAAT-TTTATGTATac
gi|29 : TCTATTGTAGCCAACAAAAGTAA-TTGTATG--------CCCCCTAAAGGTG-G-AAAC--------C-------A--------TAATTTAGATAAATTTGTCAG-TACAGTACAACAATTTCCTGTCAAACA
gi|3 : TTGACAGA-TACCAAGCAATACCT-AT--GTGTCATCC-T-TCACCCAAAACCATACT-TAAAACAATAATATTCCATACAATTTGGCAAGACTGCCTCTGCA-CAATTAGTTTCTGATGCTGAAA-TCCGTCCAATAG--T-G-CTTGCGGA
gi|32 : atAATTTTCTCAATA-C-ACCAAATCCTACCATGAAATGCATCATGCAATC-------------CA---------TTAGAAACATGttgagcagatgccgactactacaacgagttacccagtacaatttaatcgaaaactgtgtattcgaaacaaagctaaatctcggaaagaaggatcttctttcagtagaaccaaacctgcgtcactagtgctttactccaactttcaaaagcacaattccaaaaaattcggaagtttttcaggttattaatatataacctcgccattttggaagaagacccagatttgaaaaagaaattactggaacaacataaatcatcaaaatgaaacgtcaaagcccttcatcttcaaatctcttctaaccagagcagtttttacaacaccagcagtgataattcccttattgtcaagcaaatgtagataaacccaaagtgcgctccccgtgccctaatttaacttactaacacttggatctcatttattttcaaaaacggagcagtgttatattatacaggaaatcatccatgacgtgccctcttctcaacatctttatgtgtaataactgtgcgaccgcgctgctggaggaaaattacatcggctcagacagcgaacctttacgtcacagcgatggactgtccaccgtcaaccaataagagaaccaaaataccagtgtaccaaagtcatggaaatattcgaaaactgtgcgcaaaacattgtcagtccgaactgtctaaccagttttccccttattacaaattcttgaaagatacacgtggaaacagaaacgtgaaacaaaagaaaactgttctattcgaggatacaataacctgcgtaaatgctgcactacttgtaaacttctctgaaaattatttttcagggaacttgccccgcatttaacgtaaaggtcaaattgtatttacagtaatcaattgtcatatttatattatgtttaaacagtccccttactcattgtacatactatgtccctacccccctaatcccccccattagatgattactaaataattggtaccaatttatgcatatgccctggctattattattcttacatatactaaccgattttgtatacttttggtaatgtgcgcaacttaaggtgcgaattcccccccc
gi|4 : AACGACGCGGACGCATTTTGTAGAAGATTACGA-CTAGCTGAATTTTTCTTAGATAAGGAAAATG---ATGACGCAA-----------CAACAAAAGTAAATTTTATG--------CCCCCAAAAGGTA-G-AAA------G--TTCAAACCA--------TAATTTAGATAAATTTGTTAG-TACAGTACAACAATTTCCTGTCCAGCAACTTTTAAAAT-GCAAATTG-TG-T--CAGAAACAATTTCAATAAGT-CGAAATGGAACGCT-ATTGAAAACTTTAAA--AATGACGTCAACATATCATAATCAAGGAAGCCG-ATAAAG----GTGGCGC-AGTTGTTATAATGGACCTCGA-TTATTA-TAAAT-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AATACTA-TG--GGAA---A-AGTCAAACATA---TGA-TTC---TAA-A-GAA-GTAATGAAAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAAA-GAAA-CTGAATACCTA----CTCTCG----TTTAATGTAAA-AAC---CAGTAATTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTACAG-AT-AAATGCAAAAATTTCC-GAGT-TCAAA-CATATATAAAAA---GTGGTTGA-AA-GCCCAtcct
gi|5 : cttttcaaattctaatgaaaatgtggaaaaatgaatgtttgtgcgaggaactaaaatccatagaacgatggataaaatccgataaatggtttcaaagttacgaagcacaatttaaaaaagaacatcaagacaaaaatcccttcataaaatcaggtaaattccagccagacaacataaataggaaggagacaaacaggtaccaacccacggtagaatccaacttaaaccgcagaaaatatccgtcaagccggaaccagacggatgacaatattagacaccagggacgcccacagatccctttccacgagcgaccatacaaacggaacaacaatcggcagggaagtattatcacgcgcaaaaattcttttttaggatatggccccagacaaaacgatattagatagcacaaaatatagaaaaagacctgaaacctgacattaaagttactaatttatatatctaacgaatattaacagaaaatgaaattaatgtacttgaaaaaggacttatattcacccccaccccgcgcataaaaaatacagaggaaattaaaAATGACACGAGCGCGTTT-GCAGAAAGCTACGTATTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATATGA-TAA-TTTTATG--------CCCCCCAAAGG-ACG-AAAT-----GGTT-------A---------AATTTAGATAATTTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACCAAAAAATTA-TA-CAACA-AAATAACGTTAACAAATCCGGAATGG--T-----TTGAAAA----AGATAAAT-AC-ATCA-AT--CATCAT-AAAGAAGCGGAATATAGCAGTGCTG-GCTAGTCGGTA-GATGGACCGTGGTGTATT--TAA---CAATATATCTTAGGTGTGCCGTGCCTC-GAGAACAGAATTACATTACCGGTAGAAACCACAG-CGAGAGTACGTTGACCTCATATAACA-GAGTGTCTTGCAAAAAACTTGAAAAATACATTGTCCAATGAA-ACGGG-AGTAACACTTACAATCAAGAGAAATCAGA--ATCTACACTCTCTTGAGAATTTAAAGCGAACAACAAGGAGTAACTTTTCTATTGCGTTTCCAAAAATACATAAAAGTCAAATCAT-AACGTACTAAAGTTAAAAA-TTCGAGAAT-C---A-CACCTAT---AATATGT-ATTGACAATGTCCAGATGATCTTAAAAAATTAGCCCAATTGTTGCGGGACCC-ACC-TGCGAAAA-CCGACAGGAATTAGTTCTCAATTATAA--T-TATTGTGCTGAAACCCATT-C-ATCA-CCAAAGTATAAAAAG-TTACATCAGA-ACACCGTTAGTACTGTTCTAAATTCACT-------------------AACTCGGAATCTCATA-TAGTCTCATTTTGATGTGCACGAAC-----CTCTATCT-CT-AATTCT--ATCGCCT-AAGACC-GGGATGAG-CGCCATTGA--ATTGATTAGACCGTTTTCCTACATTCTTTTACACGAAGAGATTGT---TCTGATATAAGAGAATTTGCACTCATC-TATCAAGTCTTAAAATTAATTGTTGGAAACAAG-CTT---CATTGC---AATaacagacatcaaaa
gi|6 : aatatagaagaaataaccAATGACACGAGCGCGTTT-GCAGAAA-CTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACA-GAGTAA-TTTTATG--------CCCCCCAAAGG---A-AAAT-----G--T-------A----------ATTTAGATAA-TTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-T----ATTGAAAA----AGATAAATAACAAT--CAT--CATAA----AGAAGCGG-ATAA-G----GCAGTGCTGGTAGTCGTAATGGACCGTGA-GTATTAACAAATTCATTATGTCT------TGCCGTG-CTACGAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-AAGAG-GTCTTGCAAAAAACTTGAAAAATACATCAC-TGAT----ACGGA--GTAA-ACTTACAATCAAG-GAAA-AATCTTACCT-------TTTGAG-ATTTAAAGTGAA-AAC---AAGTAACTTT--TATGGT-TTACCAAAAATACATAAAAGTCAAATCATAAACG-AC-AAATGTAAAAA-TTCG-GAATCC---A-CATATAT----A---GT-ATTGA-AATGTCCAGATGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAACCCAACAGGAATTAGT--TCTCTTAGAT--TATAT--TGCTGAAA-CCATT-C-ATCATCCAAAGT-T-AAAAGTTTACATCAGAGA-ACCG-TAGAACT-TTCTAAATTCA----TC--------A----T-AACTCGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---TAAATCCCTCAATGACCTCGGACTAG-CGCCATTGAATATGGGAT-GACCGTTTTCC-TCA-TCTTTTACACGAAGAGATT-G---TCTA-----AAAGAATTTC-----ATCATATCAAGTC-TTAAATTAATGCTTG-AAACAACATTTATGCATTT
gi|7 : aatatagaagaaataaccGTTGT-TATTAGATGAT-TAT--T----AAA-TCTTT-AAGTTG-ATAAGGT-T-CAAAG-TTACATAAGAGATACGG-TAT-ATT-TTCTAAACACAAT-TCCC-----AAAACAGTCAACACAGAATC-AATTTTAGTTTTG-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATCCCAC-ATGGACTAGGATTAGACGCCATAGAACATTTGATAGATAGATTTCC-AAA-TCTTTTAAATG-ATAGCTT-T---CCC------ATAGAATTTG-----TTT-TAGAA-GTC-TAAAATTAAACCTAGAAAACAAT-TTTATGCATTCC---AATGAAATGCT-TTATAGACAAAGGTTAGGT-ACTGAGATCGCAACTAAAGTTGCGCC-----GATTTATG-CTACACTCGTTGT--AGGATTTTTAG-AAAAAAAATT-TACTCTGTT-TTCAAGGAAAAG-TTTGGACAAAAC--T-G---AAACTTTTATTAGAACA-TCATGGAAACGCAATTTTGAC-ATCTTTGTTATCAATTGGGACAAAGGTGAAAATCAACT----C-AAATATCTGTTGGGTATTCCAAATT-CT-CTGAGCCCTACAATGATATTTACAATGGAATC-------------GG---------ATAGAAAT---CAG-CATTCCTTGACGTTATGGTGATGCAAAAACAA-A--GTAACATTGTAAGCTATATCTTCTACA-TAATAACCGA-TACCAAGAAATAC----T-TATTTCATTTGTGCCGCTCTAAAC-ATACC-AGAAATAATA---TTCCATAAAACTTAGCAAGGC-GTCGTTTTA-CAA-AAATATCAGACACTAAAT-TTC--TAAATAT--TAGTCTTGCGGAATTAT
gi|8 : ACAAAGTC-TAAAATTAATTTTAGAAAACAAT-TTTATGCATTTC---AATGAAATGGT-TTNCaaaattacttctgcaaagaagctaccttaactaagaaag
gi|8 : C-TAAAATTTATCTTAGAGAACGAT-TTTATGCATAAC---AATGAAATTGT-TTATAGACAAAGGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCT-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AA-AAAAATGGTACTATGTTG-TCAA-TAAAAAGTTCGGATAAAACTTT-G---AAACCTTTATTAGACCA-TCATGGAAACGCTATTTACACGACTGTT-TTATCATTTGGGATAAAGGTGAAGATC-----------------T-TTG-ATATTCTAAACT-CT-CTGAGCCCTACAATGAAATTTAAAATGGAATCGGATTTGTTACTTCGCCATTTTATATAGAAATCAGCTAGCATTCCTTGACGTTATGGTGATGAAAAAATAA-A--GCAACATTGTAACCAATATCTTCTACATAA--AACGGA-TACCAATCAATATC-TAT-TATCTGATTCATACAACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAC-GTGTTTGTA-CAA-TAATATCAGACACTGAAA-TTC--TAAATAT--TCATCTCGCAGAATTAGAGtaaaatttatcttagagaacgattttatgcataacaatgaaattgtttatagacaaaggttaggtactgcgatgggaactaaagttgcgctgacttatgcaacactcgtcttaggatttttagaaaaaaatggtactatgttgtcaataaaaagttcggataaaactttgaaacctttattagaccatcatggaaacgctatttacacgactgttttatcatttgggataaaggtgaagatctttgatattctaaactctctgagccctacaatgaaatttaaaatggaatcggatttgttacttcgccattttatatagaaatcagctagcattccttgacgttatggtgatgaaaaaataaagcaacattgtaaccaatatcttctacataaaacggataccaatcaatatctattatctgattcatacaaccctaaacataccagaaataatattccatataatttagcaagacgtgtttgtacaataatatcagacactgaaattctaaatattcatctcgcagaattagagaaattactactgtaaagacactatcctaaaaagataattaaaattgaaattaacgaagcaaaatcacatgaaagaaaggacctcctta
13 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): TCATTCATGACGTGCACCTCTTCCAACATCTTGTATGTAATAACTTGTGCAGGCTGTGGAGAAAATTACATCGGCCAGACAGGCGACACCTTACGTCACAGGATGACTGTCCACCGTCAACAAATAAGAGAACCAAAGTACCAGTGTACTAAAGTCAGTGAACATATTCGAAACTGTGCCAAAAATTATCATCCGAACTTTACCGTTTTCCTCTTTTACAAATTCTTAAAAGATACCACGGAAACAGAACGTGAAACAAAAGAAAAACTGTTTATTCGAGGATACAAACCTGCGCTAAATGCTACACAATTGTAAACTTCTTTGAAAAATTATTTTCAGAAACATTCCCCCGCATTATACGTAAGGTCAGAATTTATTTACAGTAATCAATCTGTCATATATTATGTTTAAATGTCCCCCTACTACAATTGTACATACTGTGTATTGTATATGTCCCCCCCCCCTTTCCTCTTTCTCCCTTCCATTAATATTATAAATATTGTACAATGCATGCATGCCCTCTTATTATTATATATTCTTACCATTTTGTATATTTCAATATTTGTGTAAAGTATGGCGACCCCCCC
Unaligned ( gi|10 ): CTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACCAAAGACAAAAACTAGGAGCTTCAACCATAACAAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCGTACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAAACACCACAACGTTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGAACCCAACCGAATTTTGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATTCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCCACACCACGCCAAAA
Unaligned ( gi|11 ): AACTTTCTACATCCTCCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACGAGATGGGGAAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACAAAAGACAAAAACTAGGAGCCTTCCACACCATTAACAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCTCACCACAGCGTTCCCGGACAATATGATTAGGAGCGGAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGACCCAACCGAATTTTGATAGCAACAAAACAAAGAACAGGAGAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCACACCACGCCAAAA
Unaligned ( gi|12 ): TTTCACATCCTCATGAAAAATGGAATGATGACTTTTTGTGAAGACAAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAAACCCAATTCAAAAAGGAACACACAAAGACTAAAAAACTAGGAGCCTTCAACCAGTAACAAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAAGACATCACCAACGATACAGAAAACAGCGTTGAAACACCACAACGTCTAGAAATTTTTTTTTAGGATATGGCCGCAGAACCCAACCGAATTGGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAAATAATAAATGTATCAAAACGGACATTGACTGATCATGAAAATTAGGATACGTTGAAAAAGGACTAAAATTCACTCCCACACCACGCCAAAA
Unaligned ( gi|13 ): AACTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCAATTCAAAAAGGAACACAAAGACAAAAACTAGGAGCCTTCCAACCAAGTAACAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTCTTTTTTTAGGATATGGCCGCAGAACCCAACCGATATTGATAGCAACAAAACAAAGAACAGGAAAAACCAACCCATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCTCACACCACGCCAAAA
Unaligned ( gi|15 ): ATCTAACAAGAGCCTGTTTTGCTAGTCAACATTAAAGATTTTCCCGTCAATCACTAAATGCTACAAAACCCAACATGCGCCTACGTGCAAATACAGAAACTCAAGGATCCGAATTTAGATTTTCAAAAAACGGCCAGTAGAATTTACAGTAAAATCATCAATCACATGTGTTTCGTTCCAATCTGATATATGTTATTACCTGCCGCCGGGGACGTGGTGAAAATTATTTATCGATGAGACACGGACACACACTAAGGACATCGGCGATTTGACCGAATTTCACCGAAAAAAACCAACCGAGAACCTAAATATCAGTGTTTACCACATCCTAAATTGTTGCCAAAAATGTCTATCCGAATTTTACAGTTCTTTCATCTTATAAATTTCGTCAAGAACCACGACAGAAAAAGAACGTGGAAAACCAAAGAAAAACTATTTATTCAAAAAATATAAACCACTTCTAAACTGCAAC
Unaligned ( gi|21 ): CAGTCATGACGTGCACCCCCCCCCCCAACATTTAATGTATCATTATTTGCGCCGACTGTAGATAAAATTACATCTGTCAGACAGGCAAAACACTATGATATAAGATGACTGTGAACTGTGAACAAATAAGAGACAGTGAACATATTCAAAATTATCTCAAAATCTTAATCCAAACATTATCACTTTCTCTGGACAAATTCCTAATATATCATATA
Unaligned ( gi|23 ): GTATATCATTACTTGCGTCGACAGTAGAGAAAATTACGTCAGTCAGACAGGCGAAACGCTACAATATAAAATGGCGAAGTAACAATGTATTAATATAAAATGACGGTGCACTGTGAACAAATAAGAGACAGTGATCATATTCAAAACTATGTCAAAATGATTTTTCAAAACATTATCACTTTACAAATTCCTAATATACATACATCA
Unaligned ( gi|26 ): TATCAGTGTACCCATGTAAGCAAATTAACACATCCGAAATTGCGCCAAAAATGTTTATCCAAATTTTACCATTTTTCCATTTTATAAATTTCATAAAGACACAACAGAAAAAGAAACTTTTTTTTCAAAAATATAAAC
Unaligned ( gi|30 ): GTAAACTTCTTTGAAATTTTATTTTCCGAACATTTTCCCGCATTATACGTAGGTCAGGAATTTAGTT
Unaligned ( gi|31 ): ATATACAGTAAAATCATCAATGACATGTGTTCGTTCAAATCAGATCTATGTTATTACCTCCGCCGG
Unaligned ( gi|33 ): ACCCTAAAAAATTTATTGAAAATGGAATTAATGAAGGAAAATCACATGAAAGAAAGGACCTCC
Unaligned ( gi|34 ): TGAAGAAAATTCATTAATCGGAATGTTGAGGAGTTGTTCAG
Alignments
lowQualScore : 11111111 66666666666666666666666666666666666 1 1111 111 1 5555555 3333 11 111111 2 1111 11 11 222222 11 111 111 111 333 1 2222 111111 22222 1111 111 11 2222222 222222222222 1 11 1 1 1 1 1 1 1111 11111 1111 1 999999999999999999999 11111 111 1 2222222 111111 11111 1 11 1 11111 11111 1 2222222 2222 555555555555555555555555 11 1 111 1 111 111 1 1 11
lowQualScore : 1 1 5 1 5 3 999 5 6 5 88888888 1 99999999999999999999999999999999999 0 5 1 1 6 0 1 4444 77 6 6 666 3 8888888 6666 44 9 777777 99 0 8 0 7777 1 6 44 1 6 4 99 11 999 1 333333 1 8 8 99 8 11 444 5 8 1 444 8 444 8 8 8 1 55 0 000 8 0 1111 8 0 0 8 111111 22222 9999 1 8 444 11 8 0 0 8 8 8 8 8 4444444 0 999999999999 8 0 1 33 0 0 0 0 0 0 4 5 44 0 1 0000 00000 6 0000 77 6 77 6 2 7 6 3 6 1 333333333333333333333 5 5 5 1 5 44444 77 5 5 888 66 1 4 1 0 5 1 000 55 5 0 1 5 888 2222222 333333 66 22 1 4 3 0 4 7777 11 8 44 8 0 5 22222 1 0 4 6 33 9 0 1 1 888 1 11111 5 0 5 88888 3 7 1 1 6 1 6 7 1 0000000 6 6 7 1 7777 0 0 000000000000000000000000 66 7 1 1 1 6 77 3 6 1 2 1 6 5 2 1 22 333 1 0 7 1 5 333 000 9 5 0 1 5 1 1 1 77 55 4 4 1 1
lowQualScore : . . . . . . ... . . . ........ . ................................... . . . . . . . .... .. . . ... . ....... .... .. . ...... .. . . . .... . . .. . . . .. .. ... . ...... . . . .. . .. ... . . . ... . ... . . . . .. . ... . . .... . . . . ...... ..... .... . . ... .. . . . . . . . . ....... . ............ . . . .. . . . . . . . . .. . . .... ..... . .... .. . .. . . . . . . . ..................... . . . . . ..... .. . . ... .. . . . . . . ... .. . . . . ... ....... ...... .. .. . . . . . .... .. . .. . . . ..... . . . . .. . . . . ... . ..... . . . ..... . . . . . . . . . ....... . . . . .... . . ........................ .. . . . . . .. . . . . . . . . . .. ... . . . . . ... ... . . . . . . . . .. .. . . . .
lowQualScore : 4 4 0 7 7 0 999 7 5 0 11111111 4 11111111111111111111111111111111111 8 7 0 3 6 7 0 2222 33 7 7 555 3 8888888 3333 88 3 333333 22 0 0 8 0000 4 4 44 0 0 6 00 88 888 4 000000 4 0 0 00 0 00 000 0 0 0 000 0 000 0 0 0 4 88 6 888 0 0 4444 0 6 8 0 000000 66666 2222 4 0 000 00 0 6 8 8 0 0 0 0 0000000 8 666666666666 0 6 0 88 2 0 0 0 0 0 2 0 44 6 0 8888 55555 7 8888 33 7 77 7 5 8 7 3 7 7 555555555555555555555 7 4 7 4 7 33333 22 0 0 888 99 0 4 0 7 7 0 444 55 0 0 0 0 888 6666666 555555 22 77 0 0 2 1 0 4444 11 0 88 9 1 6 55555 0 0 2 5 88 2 5 4 7 444 9 99999 7 6 7 66666 7 7 0 0 7 0 7 3 0 0000000 7 7 1 0 4444 7 7 666666666666666666666666 77 2 0 0 0 7 55 7 7 0 5 0 7 4 7 4 99 999 0 4 1 0 7 666 000 3 7 4 4 7 4 0 4 99 77 3 0 0 0
consensus : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATG--------CCCCCCAAAGGTACG-AAAC-----G--T-------A--------TAATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-TG-T-ATTGAAAA---TAGATAAATGACGATAACAT--CATAAT-AAAGAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAATACATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCTA----CTCTCGAG-ATTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAAT-C---A-CATATAT---AA---GT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-TTCC-----AAA----TCAACTCGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTGCNGTTCGA-GAAAAA-TTCGGACAAAACTTT-G---AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAA-ACCGCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
Reference ( family-1323 ) : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATG--------CCCCCCAAAGGTACG-AAAC-----G--T-------A--------TAATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-TG-T-ATTGAAAA---TAGATAAATGACGATAACAT--CATAAT-AAAGAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAATACATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCTA----CTCTCGAG-ATTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAAT-C---A-CATATAT---AA---GT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-TTCC-----AAA----TCAACTCGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTGCNGTTCGA-GAAAAA-TTCGGACAAAACTTT-G---AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAA-ACCGCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
gi|1 : AATGACACAAGCGGGTTTTGCAAATAGCTACGT-TTGGCTGAAATTTTCTTATATCACGAAGA------AGACG-AATCTGTTGTTACAAACA--AGTAA-TTATATGCCCCCCCCCCCCCCGAA-----G-AAAC-----G--T-------A---------AACTTGGATTATTTCATCAA-TACTGTAAACCA-TTTCCCATGGAGAAACCT----ACC-AAAAATCA-TA-CAAC--AAGTAACGTTTATGTAT-CGGAATGGACTG-TCATTGAAAA---TGAAAAAAAGATAACAGTAT--CATCATAAAAGAAACGG-ATAAAA----GCAGCTCT-GAAGTTGAAATGGACCGTGA-ATATTA-CAAAT-CATTGTGTCT------TGCAGTG-CTA-GAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-A-GAA-GTCTTGC-AAAAACTTGAAAAA---ATCAT-CACTGAAAATGAAGA-TAA-ACTAACAACC-AG-GAAA-CATCTTGC-------CTTTTGAG-ATTTAAAACGAA-AAC---CAGTAACTTT--TATATT-TTACCAAAAATACAT-AAAGTCATGTCATAAACG-AC-AAATGCAAAGA-TTTG-GAAT-C-----CTCAT--------------------ATGTTCAGTTGCTCTT--ATAATTAGAACCATTTTCGCGGGA-CCTACC-TGCG-AAA-CTAATA-GAATTAGCTACCTCTTAGAT--T-TAT--TAGTGACG-CCATT-C-ATTA-CCAGATT-T-CAGAA-TTACATCAGATAAACCG-TAA-ACT-TTCTTATTTCAC--TTCCAGAGGAAA----TTAACTCGGAATC-CATATTAGTCTCA-TTTGATGC-CACGAAC-----CTCTA-TT-CT-AA---T--ATTCGTC-ATAAACTCGGACTAGCCACCAATGAATATTGGATGGACTGTTTTCC-CCA-TCTTTAACTCG-AGATATT-T---CCT------AAAGAATTCG-----TCA-TATCAAGTC-TGAAATTAAT-CTAGAAAATAAC-ATCATGTATTTT---GATGAAACTAT-TTACAGACAGAAGCTTGAC-ACTGTCATGTGAACCAAAGTTGCTCCAAGAGAAATTAT--CTACA---GTTC-----------------GAGAAA-----------CATTTGG-ACAAGA-CTCTG--AAAACTTT--------------TTGAAACAATCGTTGAACTTTTTTTTTGACGATTGTT-TTATCATTTGGGCCAGAGGAGAGGACCAATT--AATGGAGT-TTT-TC-AATATTCTTAATA-C-GCTAAGTCCTACCATGAAATTCACCATGGGATC-------------CA---------ATAGAAATATGTTGTCATTTCTTGATGTCATGGTTATTAAATGAGAGTACCG---CATAGTAACAGACGTGTTCTGCA-AATTAACAGA-TACCAGACAATACCTTAT-GCTTCATTAC-TGTTACCCTTAAG-ATGCT-----ACAATA---GTCCATACAATTTGGCAAAAC-GTCTATGCA-CAA-TCTTTTCTTATGCTGAAA-TCC--TCAAAAG--TCGCTTAGCAAAATTACAG
gi|14 : aatatagaagaaataaccCTGATGCTGAAAATCC--TCAATATAGTCGCTTGGCGGAATTACaatgcattattacaacgacgttaccaagtgcaattaattaaaaacggtttcaacaaagctaaatcccaggatagaaaggttcttcaagtaaaatccaaacctcgtca
gi|16 : CTGATGCTGAAAATCC--TCAATATAGTCGCTTGGCGGAATTACtaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatcacaacatcaactttctacatcctcat
gi|17 : GCATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTTTG---AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTTGG-ACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAA-ACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-Ttaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatca
gi|18 : CATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTTTG---AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTTGG-ACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAA-ACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-T
gi|19 : AATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCC-ACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATCAGAGTAA-TTTTATG--------CCCCCCAAAGG-ACGCAAATG----G--T-------A---------AATTTAGATAA-TTCATCGACTACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTACTA-CAA-A-AAATAACGTTAACAAATCCGGAATGG--T-----TTGAAAA----AGAT-AAT-AC-ATCA-AT--CATAAT-A
gi|2 : aatatagaagaaataaccAACGACGCGGACGCATTTTGTAGACGATTACGA-CTAGCT-AATTTTTCTTG-GTAAGGAAAATG---ATGACG-CATCTATT-TTGCCAACAAAAGTAA-TTT-ATG--------CCCCT--AAGGTA-G-AAACCATAAA--T-------AATTAACATTAATTTAGATAAATTTGTTAG-TACAGTACAATAATTTCCTGTTGAACAACTT----AAT-GCAAATTG-TGTCAA---AAACAATTTTAAAAAGT-CGGAATGGAATGCT-ATTGAAAACT-TAAA-AAATGACGATAACAT--CATAATCAAGGAAGCCG-ATAAAG----GTGGTGC-AGTTGTTATAATGGACCGAAA-TTATTG-TAAAA-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AAAAAAA-AA--AAAA---AAAG-CAAACATA---TGA-TTC---TAA-A-GAA-GTCATG-AAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAAA-GAAA-CTGATTACCTA----CTCTCG----TTTGATGTTAA-AAC---CAGTATTTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTAACG-AT-AAATGCAAAAA-TTCC-GATT-C---ATCATATAT---AA---GT-GTTGA-AA-GCCCAACAGACCTC--AAAATCAGACCTATAGTTGCGGGA-CC-ATCATGTG-AAA-CTCACA-GAATTAGTTATCTAATATAT--G-TAT--TA-TCAAA-CCCTTAT-GTTG-ATAAGGC-T-CAAAG-TTACATAACAGATACGA-TAG-ATT-TTCTAAA--CACTCTTCCCGGAAAAG----TCAACACGGAATC-AATTTTAGTGTCA-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATTTCAC-ATGAACTAGGATTACCCGCCATAGAACATTGGATAGACAGATTCCC-AAA-TCTTTTAAACG-ATAGATT-T---CCT------AAAGAATTTG-----ATT-TAAAAAGTC-TAAAATTAATCCTAGAGAACAAT-TTTATGCATTTC---AATGAAATGGT-TTACAGACAAAAGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCC-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AAGAAAAATTGTACTCTGTTGTTAAG-GAAAAG-TTCGGACAAAACTTT-G---AAACTTCTATTAGAACA-TCATGGACACGCTATTTAGACGACTTTT-TTATCATTTGGGACAAAGGTGAAGATCAACTAAAAC--AAT-TTT-TTG-ATATTCTAAACT-CT-CTGAGCCCTACAATGAAATTTACAATGGAATC-------------GG---------ATAGAAATCAGCTAGCATTCCTTGACGTGATGGTGATGAAAAAAGAA-A--GTAACATTGTAACCGATATCTTCTACA-AAATAACGGA-TACCAAGCAATA-CTTAT-TATTTGATTCGTGCCACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAT-GTCTTTGTA-CAA-TAATATCAGACACTACAA-TTA--TCAATAT--TAGTCTCGCGGAATTAGAG
gi|20 : C-CAT-TGAGTCTTA-ATTGATGC-CACAAACACCAATCCTA-ATACT-AG---T--ATTTCTC-ATAATCTAGAATTAGCCGCCATAGAATAATGGATATGCTGATTTCC-TAA-TCTTCAACACG-TGAGATT-TTCACCT----------CATTTG-----TTA-CATCGGGTG-TACAATTAATCTTGGAAAACAAT-TTTA------------ATGAAAATGT-TCACAAACGAATGCTGGCC-ACTGCGATAGGAACAAAA
gi|22 : acaggattagTA-AT-CTGAA---T--TTTCCAT-ATGATATAG-ATTAGTCACCGTAGATCATTGCGTAAAA---------AAG-TCTTATGCATG-ACAGATT-T---CCT-------AGGAATTTA-----TTT-TCAATTGTC-TACAGTT-------------GAT-TTCATTCATTTTAAAAATGATATGAT-TCATATACAAAAGTTAGGT-ACTGGGATGAGATCCAAAGGTGTGCA-----GACCTGTG-GAACACTCTTTTT--GGGATGTTT
gi|24 : TTATAT--T-TAT--TGCTGAAA-CCATT-C-ATCA-CCAAAGT-T-AAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-------------------AACTCGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---T--ATCCCTC-AAGACCTCGGACTAGCCGCCATTGAATATTGG
gi|25 : cAATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATAAGAGTAA-TTTTATG--------CCCCCCAAAGG-ACG-AAAT-----G--T-------A---------AATTTAGATAATTTCATCG
gi|27 : aatatagaagaaataaccATGGATTTT---GATGAAATTAT-TTA-----------TAGGC-ATGGCAATGGGAACTAAAGTTGCGCC-----CATTTATG-TAGCA-TCGTTTC--AGACTTTTTAC-CAAAAAA---ATACTCTAC---TAAA-GGAAAA-TTCACACAACATTCT-GTGCAAAC
gi|28 : CCAC-TTGAACTAGGATTTACCGCCATAGAACATTGAATAGATC----TCC-AAA-TCTTTTAAATG-ATAGATT-T---CCT------AACGAATTTG-----CTT-TAAACAGTC-TAAAAAAAATCCTAGAGGATAAT-TTTATGTATac
gi|29 : TCTATTGTAGCCAACAAAAGTAA-TTGTATG--------CCCCCTAAAGGTG-G-AAAC--------C-------A--------TAATTTAGATAAATTTGTCAG-TACAGTACAACAATTTCCTGTCAAACA
gi|3 : TTGACAGA-TACCAAGCAATACCT-AT--GTGTCATCC-T-TCACCCAAAACCATACT-TAAAACAATAATATTCCATACAATTTGGCAAGACTGCCTCTGCA-CAATTAGTTTCTGATGCTGAAA-TCCGTCCAATAG--T-G-CTTGCGGA
gi|32 : atAATTTTCTCAATA-C-ACCAAATCCTACCATGAAATGCATCATGCAATC-------------CA---------TTAGAAACATGttgagcagatgccgactactacaacgagttacccagtacaatttaatcgaaaactgtgtattcgaaacaaagctaaatctcggaaagaaggatcttctttcagtagaaccaaacctgcgtcactagtgctttactccaactttcaaaagcacaattccaaaaaattcggaagtttttcaggttattaatatataacctcgccattttggaagaagacccagatttgaaaaagaaattactggaacaacataaatcatcaaaatgaaacgtcaaagcccttcatcttcaaatctcttctaaccagagcagtttttacaacaccagcagtgataattcccttattgtcaagcaaatgtagataaacccaaagtgcgctccccgtgccctaatttaacttactaacacttggatctcatttattttcaaaaacggagcagtgttatattatacaggaaatcatccatgacgtgccctcttctcaacatctttatgtgtaataactgtgcgaccgcgctgctggaggaaaattacatcggctcagacagcgaacctttacgtcacagcgatggactgtccaccgtcaaccaataagagaaccaaaataccagtgtaccaaagtcatggaaatattcgaaaactgtgcgcaaaacattgtcagtccgaactgtctaaccagttttccccttattacaaattcttgaaagatacacgtggaaacagaaacgtgaaacaaaagaaaactgttctattcgaggatacaataacctgcgtaaatgctgcactacttgtaaacttctctgaaaattatttttcagggaacttgccccgcatttaacgtaaaggtcaaattgtatttacagtaatcaattgtcatatttatattatgtttaaacagtccccttactcattgtacatactatgtccctacccccctaatcccccccattagatgattactaaataattggtaccaatttatgcatatgccctggctattattattcttacatatactaaccgattttgtatacttttggtaatgtgcgcaacttaaggtgcgaattcccccccc
gi|4 : AACGACGCGGACGCATTTTGTAGAAGATTACGA-CTAGCTGAATTTTTCTTAGATAAGGAAAATG---ATGACGCAA-----------CAACAAAAGTAAATTTTATG--------CCCCCAAAAGGTA-G-AAA------G--TTCAAACCA--------TAATTTAGATAAATTTGTTAG-TACAGTACAACAATTTCCTGTCCAGCAACTTTTAAAAT-GCAAATTG-TG-T--CAGAAACAATTTCAATAAGT-CGAAATGGAACGCT-ATTGAAAACTTTAAA--AATGACGTCAACATATCATAATCAAGGAAGCCG-ATAAAG----GTGGCGC-AGTTGTTATAATGGACCTCGA-TTATTA-TAAAT-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AATACTA-TG--GGAA---A-AGTCAAACATA---TGA-TTC---TAA-A-GAA-GTAATGAAAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAAA-GAAA-CTGAATACCTA----CTCTCG----TTTAATGTAAA-AAC---CAGTAATTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTACAG-AT-AAATGCAAAAATTTCC-GAGT-TCAAA-CATATATAAAAA---GTGGTTGA-AA-GCCCAtcct
gi|5 : cttttcaaattctaatgaaaatgtggaaaaatgaatgtttgtgcgaggaactaaaatccatagaacgatggataaaatccgataaatggtttcaaagttacgaagcacaatttaaaaaagaacatcaagacaaaaatcccttcataaaatcaggtaaattccagccagacaacataaataggaaggagacaaacaggtaccaacccacggtagaatccaacttaaaccgcagaaaatatccgtcaagccggaaccagacggatgacaatattagacaccagggacgcccacagatccctttccacgagcgaccatacaaacggaacaacaatcggcagggaagtattatcacgcgcaaaaattcttttttaggatatggccccagacaaaacgatattagatagcacaaaatatagaaaaagacctgaaacctgacattaaagttactaatttatatatctaacgaatattaacagaaaatgaaattaatgtacttgaaaaaggacttatattcacccccaccccgcgcataaaaaatacagaggaaattaaaAATGACACGAGCGCGTTT-GCAGAAAGCTACGTATTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATATGA-TAA-TTTTATG--------CCCCCCAAAGG-ACG-AAAT-----GGTT-------A---------AATTTAGATAATTTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACCAAAAAATTA-TA-CAACA-AAATAACGTTAACAAATCCGGAATGG--T-----TTGAAAA----AGATAAAT-AC-ATCA-AT--CATCAT-AAAGAAGCGGAATATAGCAGTGCTG-GCTAGTCGGTA-GATGGACCGTGGTGTATT--TAA---CAATATATCTTAGGTGTGCCGTGCCTC-GAGAACAGAATTACATTACCGGTAGAAACCACAG-CGAGAGTACGTTGACCTCATATAACA-GAGTGTCTTGCAAAAAACTTGAAAAATACATTGTCCAATGAA-ACGGG-AGTAACACTTACAATCAAGAGAAATCAGA--ATCTACACTCTCTTGAGAATTTAAAGCGAACAACAAGGAGTAACTTTTCTATTGCGTTTCCAAAAATACATAAAAGTCAAATCAT-AACGTACTAAAGTTAAAAA-TTCGAGAAT-C---A-CACCTAT---AATATGT-ATTGACAATGTCCAGATGATCTTAAAAAATTAGCCCAATTGTTGCGGGACCC-ACC-TGCGAAAA-CCGACAGGAATTAGTTCTCAATTATAA--T-TATTGTGCTGAAACCCATT-C-ATCA-CCAAAGTATAAAAAG-TTACATCAGA-ACACCGTTAGTACTGTTCTAAATTCACT-------------------AACTCGGAATCTCATA-TAGTCTCATTTTGATGTGCACGAAC-----CTCTATCT-CT-AATTCT--ATCGCCT-AAGACC-GGGATGAG-CGCCATTGA--ATTGATTAGACCGTTTTCCTACATTCTTTTACACGAAGAGATTGT---TCTGATATAAGAGAATTTGCACTCATC-TATCAAGTCTTAAAATTAATTGTTGGAAACAAG-CTT---CATTGC---AATaacagacatcaaaa
gi|6 : aatatagaagaaataaccAATGACACGAGCGCGTTT-GCAGAAA-CTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACA-GAGTAA-TTTTATG--------CCCCCCAAAGG---A-AAAT-----G--T-------A----------ATTTAGATAA-TTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-T----ATTGAAAA----AGATAAATAACAAT--CAT--CATAA----AGAAGCGG-ATAA-G----GCAGTGCTGGTAGTCGTAATGGACCGTGA-GTATTAACAAATTCATTATGTCT------TGCCGTG-CTACGAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-AAGAG-GTCTTGCAAAAAACTTGAAAAATACATCAC-TGAT----ACGGA--GTAA-ACTTACAATCAAG-GAAA-AATCTTACCT-------TTTGAG-ATTTAAAGTGAA-AAC---AAGTAACTTT--TATGGT-TTACCAAAAATACATAAAAGTCAAATCATAAACG-AC-AAATGTAAAAA-TTCG-GAATCC---A-CATATAT----A---GT-ATTGA-AATGTCCAGATGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAACCCAACAGGAATTAGT--TCTCTTAGAT--TATAT--TGCTGAAA-CCATT-C-ATCATCCAAAGT-T-AAAAGTTTACATCAGAGA-ACCG-TAGAACT-TTCTAAATTCA----TC--------A----T-AACTCGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---TAAATCCCTCAATGACCTCGGACTAG-CGCCATTGAATATGGGAT-GACCGTTTTCC-TCA-TCTTTTACACGAAGAGATT-G---TCTA-----AAAGAATTTC-----ATCATATCAAGTC-TTAAATTAATGCTTG-AAACAACATTTATGCATTT
gi|7 : aatatagaagaaataaccGTTGT-TATTAGATGAT-TAT--T----AAA-TCTTT-AAGTTG-ATAAGGT-T-CAAAG-TTACATAAGAGATACGG-TAT-ATT-TTCTAAACACAAT-TCCC-----AAAACAGTCAACACAGAATC-AATTTTAGTTTTG-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATCCCAC-ATGGACTAGGATTAGACGCCATAGAACATTTGATAGATAGATTTCC-AAA-TCTTTTAAATG-ATAGCTT-T---CCC------ATAGAATTTG-----TTT-TAGAA-GTC-TAAAATTAAACCTAGAAAACAAT-TTTATGCATTCC---AATGAAATGCT-TTATAGACAAAGGTTAGGT-ACTGAGATCGCAACTAAAGTTGCGCC-----GATTTATG-CTACACTCGTTGT--AGGATTTTTAG-AAAAAAAATT-TACTCTGTT-TTCAAGGAAAAG-TTTGGACAAAAC--T-G---AAACTTTTATTAGAACA-TCATGGAAACGCAATTTTGAC-ATCTTTGTTATCAATTGGGACAAAGGTGAAAATCAACT----C-AAATATCTGTTGGGTATTCCAAATT-CT-CTGAGCCCTACAATGATATTTACAATGGAATC-------------GG---------ATAGAAAT---CAG-CATTCCTTGACGTTATGGTGATGCAAAAACAA-A--GTAACATTGTAAGCTATATCTTCTACA-TAATAACCGA-TACCAAGAAATAC----T-TATTTCATTTGTGCCGCTCTAAAC-ATACC-AGAAATAATA---TTCCATAAAACTTAGCAAGGC-GTCGTTTTA-CAA-AAATATCAGACACTAAAT-TTC--TAAATAT--TAGTCTTGCGGAATTAT
gi|8 : ACAAAGTC-TAAAATTAATTTTAGAAAACAAT-TTTATGCATTTC---AATGAAATGGT-TTNCaaaattacttctgcaaagaagctaccttaactaagaaag
gi|8 : C-TAAAATTTATCTTAGAGAACGAT-TTTATGCATAAC---AATGAAATTGT-TTATAGACAAAGGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCT-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AA-AAAAATGGTACTATGTTG-TCAA-TAAAAAGTTCGGATAAAACTTT-G---AAACCTTTATTAGACCA-TCATGGAAACGCTATTTACACGACTGTT-TTATCATTTGGGATAAAGGTGAAGATC-----------------T-TTG-ATATTCTAAACT-CT-CTGAGCCCTACAATGAAATTTAAAATGGAATCGGATTTGTTACTTCGCCATTTTATATAGAAATCAGCTAGCATTCCTTGACGTTATGGTGATGAAAAAATAA-A--GCAACATTGTAACCAATATCTTCTACATAA--AACGGA-TACCAATCAATATC-TAT-TATCTGATTCATACAACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAC-GTGTTTGTA-CAA-TAATATCAGACACTGAAA-TTC--TAAATAT--TCATCTCGCAGAATTAGAGtaaaatttatcttagagaacgattttatgcataacaatgaaattgtttatagacaaaggttaggtactgcgatgggaactaaagttgcgctgacttatgcaacactcgtcttaggatttttagaaaaaaatggtactatgttgtcaataaaaagttcggataaaactttgaaacctttattagaccatcatggaaacgctatttacacgactgttttatcatttgggataaaggtgaagatctttgatattctaaactctctgagccctacaatgaaatttaaaatggaatcggatttgttacttcgccattttatatagaaatcagctagcattccttgacgttatggtgatgaaaaaataaagcaacattgtaaccaatatcttctacataaaacggataccaatcaatatctattatctgattcatacaaccctaaacataccagaaataatattccatataatttagcaagacgtgtttgtacaataatatcagacactgaaattctaaatattcatctcgcagaattagagaaattactactgtaaagacactatcctaaaaagataattaaaattgaaattaacgaagcaaaatcacatgaaagaaaggacctcctta
blockSeqs : T A T G A C GAG C A A . C TAGAAACCATAAATAATTAACATT A C T A T C TTAA AA C T CAG C AATGCT CTTT TA G GATAAC AT C A CAGT G T TA T T A TG AA ATT A TAGGTG T C C TT C GT ACC A T A CGT C ATA C A T A AA TAC C C CAG C A CTGAT ACACT AGAA T C AAG TC G T T T T A TCAAA AAAAAGTGG C T C AA C . A A C C G TA T GAT TGTGC C ATG AT A AA T G T T T G T CTCTTCCCGGAAAAGTC T T T C G ACCAA TC A G TTC AA A A A C A AGA TA T A T G TCA GATATAA CACTCA CA AA A T C A AAAA TA A AG C G . G G G T TT A G G TTA T ACAGT G G GTGC T G T G G G G A A AAAAC A G A T ACGA GGATTTGTTACTTCGCCATTTTAT AT T T T C . CC C C G A G T T A G TT GTT A G A C AAA ATA A T C T A T A GT AG C C G C
blockSeqs : C G T A . C GAG . A . . C TAGAAAGTTCAAACCAT T . A C A A . A . . CA C AACGCT CTT TA G GTCAAC . C . . G C TG T T C T G AA A . T . . A . . . C . A . . . . . . A CA TAC . C CAG . . CTGAA A AGA T . . . . T . . . . CAT AATATGTA . T A . . . . . . G G TC T TA TGC . AAG G . C . G C . A . T ATTCCCAAAACAGTC . A . T . . C . . . . T . T C A TGA A . A G . . AA A T TC G . C . G TA A TG C G . G G G T TT A G G TTA T ACAGT . . TG T G T G . G G A A AACG . . A T ACGA CA AT T T T C . CC C C G A G . T A G TT GTT A G A . AAA . G . C . T T A . AG C C G C
blockSeqs : T A T G . G GAG . A . . T ACGCAAATGGTA A . A C A A . G . . CA . AT . T A ATCA . . . . T T A C T T T A AT A . C . . A . . . C . G . . . . . . T CA . . . AGT . . TCAGA A . A . . . . A . . . . CCA AAGTG . . A . . . . . . A . TG T G TGC . CA A . A . G C . . . T TCAT . A . T . . A . . . . A . T T A CGT T . . C . . A T A AA T . C . G GG . AG . G . C . A C . C . G TTG A GTTGT . . TG A . A A . T G A T AACG . . A A CT CA CA G G G G . . T C T C C . A G . TT TA G A T . AG . A . . . A A . . . A T C G
blockSeqs : C G T A . C GAG . A . . A ACGAAATGGTTA A . A C A C . G . . A . T . A . ATCA . . . . A . A A . T G . . T . C . . C . . . . . T . . . . . . T A . . . GT . . AATCT . . A . . . . . . . . . CA AGTA . . . G T TA . CA A . A . G T . . . C CT . A . T . . A . . . . T . C C T CGT A . . T . . A T T AA A . T . A TG . GG . G . C . A C . A . A TGG A GTTT . . G A . A T . A . . T CA . . G C CA GG AT G G G C . . T . T C C . T A . T TA C . A . TA . A . . . A T . . . A T T T
blockSeqs : T A . G . C . . A . . C ACGAAATGTA T . T A T C . A . . . . T . . . AATC . . G T T . CA G . C . . . . . . . CT . T . T . . T . . . . A . A C A AGA A . . G . . A C T TC A . G . G GA . GG . G . T . A C . A . A TT A GTTG . . G A . A A . T . . T . . . . A CT CA CA . G G T . . C . T C C . A C . T TA C . T . AG . . . . . A . . . C T T G
blockSeqs : T A . . . . . . T . . C TGGAAACCAT . . T A T . . . C . . T . . . . C . C A T C T . . G . . . A C TC A . C . A TA . G . . . T . T C . . . . A A AC . . G . A CT GG . . G . . G G . T . AG . . . . . A . . . . . C
blockSeqs : . . . . AAAATGTA . C . . . . T . C . T . A . . T . . . T T GA A . T . A GC . G . . . C . A . . .
blockSeqs : A . A . A CA . . C . A GG . . .
blockSeqs : . . . A TG .
blockSeqs : .
blockSeqCons : GAG ******** ACGAAATGTTA************************ CA* **** ATCA** CA *** A**** **** CCA**** AAGTG******* CTCCCCGGAG*********** ***** TTG ACNGT TG*** AACG*** ** AG*
originalCons : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATG--------CCCCCCAAAGGTACG-AAAC-----G--T-------A--------TAATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-TG-T-ATTGAAAA---TAGATAAATGACGATAACAT--CATAAT-AAAGAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAATACATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCTA----CTCTCGAG-ATTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAAT-C---A-CATATAT---AA---GT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT-TTCC-----AAA----TCAACTCGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTATACTCTGCNGTTCGA-GAAAAA-TTCGGACAAAACTTT-G---AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAA-ACCGCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
finalCons : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATG--------CCCCCCAAAGGACGAAATGTTA------------------------AATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGGA-TG-T-ATTGAAAA----AGATAAATGACATCA--AT--CATAAT-AAAGAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAA---ATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCTA----CTCTCG----TTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAATCCA----CATATATAAGTG-------TTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACTCCCCGGAG-----------AACTCGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTGTACTCTACNGTTCGA-GAAAAA-TTCGGACAAAACTTTTG---AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATTAACG---AGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAA-A--GCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACCAG-AAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
13 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): TCATTCATGACGTGCACCTCTTCCAACATCTTGTATGTAATAACTTGTGCAGGCTGTGGAGAAAATTACATCGGCCAGACAGGCGACACCTTACGTCACAGGATGACTGTCCACCGTCAACAAATAAGAGAACCAAAGTACCAGTGTACTAAAGTCAGTGAACATATTCGAAACTGTGCCAAAAATTATCATCCGAACTTTACCGTTTTCCTCTTTTACAAATTCTTAAAAGATACCACGGAAACAGAACGTGAAACAAAAGAAAAACTGTTTATTCGAGGATACAAACCTGCGCTAAATGCTACACAATTGTAAACTTCTTTGAAAAATTATTTTCAGAAACATTCCCCCGCATTATACGTAAGGTCAGAATTTATTTACAGTAATCAATCTGTCATATATTATGTTTAAATGTCCCCCTACTACAATTGTACATACTGTGTATTGTATATGTCCCCCCCCCCTTTCCTCTTTCTCCCTTCCATTAATATTATAAATATTGTACAATGCATGCATGCCCTCTTATTATTATATATTCTTACCATTTTGTATATTTCAATATTTGTGTAAAGTATGGCGACCCCCCC
Unaligned ( gi|10 ): CTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACCAAAGACAAAAACTAGGAGCTTCAACCATAACAAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCGTACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAAACACCACAACGTTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGAACCCAACCGAATTTTGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATTCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCCACACCACGCCAAAA
Unaligned ( gi|11 ): AACTTTCTACATCCTCCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACGAGATGGGGAAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACAAAAGACAAAAACTAGGAGCCTTCCACACCATTAACAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCTCACCACAGCGTTCCCGGACAATATGATTAGGAGCGGAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGACCCAACCGAATTTTGATAGCAACAAAACAAAGAACAGGAGAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCACACCACGCCAAAA
Unaligned ( gi|12 ): TTTCACATCCTCATGAAAAATGGAATGATGACTTTTTGTGAAGACAAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAAACCCAATTCAAAAAGGAACACACAAAGACTAAAAAACTAGGAGCCTTCAACCAGTAACAAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAAGACATCACCAACGATACAGAAAACAGCGTTGAAACACCACAACGTCTAGAAATTTTTTTTTAGGATATGGCCGCAGAACCCAACCGAATTGGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAAATAATAAATGTATCAAAACGGACATTGACTGATCATGAAAATTAGGATACGTTGAAAAAGGACTAAAATTCACTCCCACACCACGCCAAAA
Unaligned ( gi|13 ): AACTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCAATTCAAAAAGGAACACAAAGACAAAAACTAGGAGCCTTCCAACCAAGTAACAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTCTTTTTTTAGGATATGGCCGCAGAACCCAACCGATATTGATAGCAACAAAACAAAGAACAGGAAAAACCAACCCATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCTCACACCACGCCAAAA
Unaligned ( gi|15 ): ATCTAACAAGAGCCTGTTTTGCTAGTCAACATTAAAGATTTTCCCGTCAATCACTAAATGCTACAAAACCCAACATGCGCCTACGTGCAAATACAGAAACTCAAGGATCCGAATTTAGATTTTCAAAAAACGGCCAGTAGAATTTACAGTAAAATCATCAATCACATGTGTTTCGTTCCAATCTGATATATGTTATTACCTGCCGCCGGGGACGTGGTGAAAATTATTTATCGATGAGACACGGACACACACTAAGGACATCGGCGATTTGACCGAATTTCACCGAAAAAAACCAACCGAGAACCTAAATATCAGTGTTTACCACATCCTAAATTGTTGCCAAAAATGTCTATCCGAATTTTACAGTTCTTTCATCTTATAAATTTCGTCAAGAACCACGACAGAAAAAGAACGTGGAAAACCAAAGAAAAACTATTTATTCAAAAAATATAAACCACTTCTAAACTGCAAC
Unaligned ( gi|21 ): CAGTCATGACGTGCACCCCCCCCCCCAACATTTAATGTATCATTATTTGCGCCGACTGTAGATAAAATTACATCTGTCAGACAGGCAAAACACTATGATATAAGATGACTGTGAACTGTGAACAAATAAGAGACAGTGAACATATTCAAAATTATCTCAAAATCTTAATCCAAACATTATCACTTTCTCTGGACAAATTCCTAATATATCATATA
Unaligned ( gi|23 ): GTATATCATTACTTGCGTCGACAGTAGAGAAAATTACGTCAGTCAGACAGGCGAAACGCTACAATATAAAATGGCGAAGTAACAATGTATTAATATAAAATGACGGTGCACTGTGAACAAATAAGAGACAGTGATCATATTCAAAACTATGTCAAAATGATTTTTCAAAACATTATCACTTTACAAATTCCTAATATACATACATCA
Unaligned ( gi|26 ): TATCAGTGTACCCATGTAAGCAAATTAACACATCCGAAATTGCGCCAAAAATGTTTATCCAAATTTTACCATTTTTCCATTTTATAAATTTCATAAAGACACAACAGAAAAAGAAACTTTTTTTTCAAAAATATAAAC
Unaligned ( gi|30 ): GTAAACTTCTTTGAAATTTTATTTTCCGAACATTTTCCCGCATTATACGTAGGTCAGGAATTTAGTT
Unaligned ( gi|31 ): ATATACAGTAAAATCATCAATGACATGTGTTCGTTCAAATCAGATCTATGTTATTACCTCCGCCGG
Unaligned ( gi|33 ): ACCCTAAAAAATTTATTGAAAATGGAATTAATGAAGGAAAATCACATGAAAGAAAGGACCTCC
Unaligned ( gi|34 ): TGAAGAAAATTCATTAATCGGAATGTTGAGGAGTTGTTCAG
Alignments
lowQualScore : 111111111 4444444444444444444444444444444 1 1111 1 55555555 2222 11 11 2222222 1 1111 11 11 222222 11 111 111 111 111 2222 111111 22222 4444444444 111 11 1111 222222222 1 11 1 1 1 1 1 1 1111 11111 1111 1 9999999999999999 11111 11111 111 1 2222222 111111 11111 1 11 1 111 11111 1 1 2222222 2222 555555555555555555555555 11 1 111 1 111 111 1 1 11
lowQualScore : 1 1 1 5 3 666 5 0 5 999999999 1111111111111111111111111111111 0 5 1 1 6 0 1 4444 77 6 6 55 6 3 88888888 5555 44 66 6 3 1111111 3 3 8 8 0 7777 1 6 44 1 6 4 99 11 999 1 333333 1 8 8 99 8 11 444 5 8 1 444 8 444 8 8 8 1 55 0 444 8 0 99 1111 8 0 0 8 111111 22222 4444444444 1 8 444 11 8 0 0 8 8 8 8 8 0 8 5555 0 8 000000000 8 0 1 33 0 0 0 0 0 0 4 5 44 0 1 0000 00000 6 0000 77 6 77 6 2 7 6 3 6 1 2 6666666666666666 66666 5 5 5 1 5 44444 77 5 5 888 66 1 4 1 0 5 1 000 55 5 0 1 5 888 2222222 333333 66 22 1 4 3 0 4 7777 11 8 44 8 0 5 22222 1 0 4 6 33 9 0 1 1 555 1 22222 5 0 5 2 5 5 3 7 1 1 6 1 6 7 1 0000000 6 6 7 1 7777 0 0 000000000000000000000000 66 7 1 1 1 88 6 1 2 1 6 5 2 1 22 333 1 0 7 1 5 333 000 9 5 0 1 5 1 1 1 77 55 4 4 1 1
lowQualScore : . . . . . ... . . . ......... ............................... . . . . . . . .... .. . . .. . . ........ .... .. .. . . ....... . . . . . .... . . .. . . . .. .. ... . ...... . . . .. . .. ... . . . ... . ... . . . . .. . ... . . .. .... . . . . ...... ..... .......... . . ... .. . . . . . . . . . . .... . . ......... . . . .. . . . . . . . . .. . . .... ..... . .... .. . .. . . . . . . . . ................ ..... . . . . . ..... .. . . ... .. . . . . . . ... .. . . . . ... ....... ...... .. .. . . . . . .... .. . .. . . . ..... . . . . .. . . . . ... . ..... . . . . . . . . . . . . . . . ....... . . . . .... . . ........................ .. . . . . .. . . . . . . . . .. ... . . . . . ... ... . . . . . . . . .. .. . . . .
lowQualScore : 4 4 7 7 0 333 7 4 0 555555555 4444444444444444444444444444444 8 7 0 3 6 7 0 2222 33 7 7 77 7 3 88888888 8888 88 00 7 5 0000000 0 3 0 0 8 0000 4 4 44 0 0 6 00 88 888 4 000000 4 0 0 00 0 00 000 0 0 0 000 0 000 0 0 0 4 88 6 000 0 6 00 4444 0 6 8 0 000000 22222 2222222222 4 0 000 00 0 6 8 8 0 0 0 0 8 0 2222 8 0 888888888 0 6 0 88 2 0 0 0 0 0 2 0 44 6 0 8888 55555 7 8888 33 7 77 7 5 8 7 3 7 7 5 8888888888888888 77777 7 4 7 4 7 33333 22 0 0 888 99 0 4 0 7 7 0 444 55 0 0 0 0 888 6666666 555555 22 77 0 0 2 1 0 4444 11 0 88 9 1 6 55555 0 0 2 5 88 2 5 4 7 111 9 33333 7 6 7 0 7 7 7 7 0 0 7 0 7 3 0 0000000 7 7 1 0 4444 7 7 666666666666666666666666 77 2 0 0 0 33 7 0 5 0 7 4 7 4 99 999 0 4 1 0 7 666 000 3 7 4 4 7 4 0 4 99 77 3 0 0 0
consensus : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATGCCCCCC--------AAAGG-----AC--G-AAAT-GTT------A-----AATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGG-A-TG-T-ATTGAAAA----AGATAAAT-GAC-ATCA--A----TCATNAT-AAA-GAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAA---ATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCT--ACTCTC------GAGATTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAATC-C--A-CATAT-AT---AAGT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACTC--CCCGGA-------AACT-----CGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTGTACTCTGCNGTTCGA-GAAAAA-TTCGGACAAAACTTT-TG-AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAAA--GCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
Reference ( family-1323 ) : AACGACGCGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACAAGAGTAA-TTTTATGCCCCCC--------AAAGG-----AC--G-AAAT-GTT------A-----AATTTAGATAANTTCGTCGG-TACNGTAAAACANTTTCCCGTGGAACANCTT----ACC-GAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGG-A-TG-T-ATTGAAAA----AGATAAAT-GAC-ATCA--A----TCATAAT-AAA-GAAGCGG-ATAAAG----GCGGCGCTAGTNGTTATAATGGACCGCGA-NTATTA-TAAAT-CAATGTGTCT------TGCCGTG-CTA-GAGAACAGTA-NATACTA-CG--AGAA---ACAG-CAANCGTA---TGA-CTC---TAA-A-GAA-GTCTTGCAAAAAACTCGAAAAA---ATCGT-CGATGAACACGGACAGTAA-ACTTACAACCAAG-GAAA-CAGATTACCT--ACTCTC------G---TTTAAAGCGAA-AAC---CAGTAACTTT--TATGGC-TTACCAAAAATACATAAAAGTCAAGTCATNAACG-AC-AAATGCAAAAA-TTCG-GAATC-C--A-CATAT-AT---AAGT-GTTGA-AATGTCCAGNTGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAA-CCGACAGGAATTAGTTATCTATTANAT--T-TAT--TGCTGAAA-CCATT-C-GTCG-CCAAAGT-T-NAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACTC--CCCGGAG------AACT-----CGGAATC-CATATTAGTCTCA-TTCGATGT-CACGAAC-----CTCTA-CT-CT-AA---T--ATCCCNC-ATGANCTAGGATTAGCCGCCATNGAACATTGGATAGACCGNTTTCC-AAA-TCTTTTACACG-ANAGATT-T---CCT------AAAGAATTTG-----NTT-TANAAAGTC-TAAAATTAATCCTAGAAAACAAT-TTTATGCATTTC---GATGAAATTGT-TTACAGACAAAGGCTAGGC-ACTGCGATGGGAACCAAAGTTGCGCC-----GANTTATG-CGACACTCGTTTT--AGGATTTTTAG-AAGAGAAATTGTACTCTACNGTTCGA-GAAAAA-TTCGGACAAAACTTT-TG-AAACCTTTATTAGAACAGTCGTGGAAACGCTNTTTNGACGATTTTT-TTATCANTTGGGACAAAGGNGAAGACCAATT--AAC-GAGT-TTT-TCGAATATTCTNAATT-CTACTGAGCCCTACCATGAAATTTACCATGGAATC-------------CG---------ATAGAAATATGCTGTCATTCCTTGACGTCATGGTNATNAAAAGACAAA--GCAACATNGTAACCGACGTNTTCTACA-AATTGACGGA-TACCAAGCAATACCTTAT-TNTTTNATCC-TGCCACCCNAAAC-ATACC-AGAAACAATA---TTCCATACAATTTAGCAAGAC-GTCTCTGCA-CAA-TAATATCNGACGCTGAAA-TCC--TCAATAT--TCGCCTNGCGGAATTACAG
gi|1 : AATGACACAAGCGGGTTTTGCAAATAGCTACGT-TTGGCTGAAATTTTCTTATATCACGAAGA------AGACG-AATCTGTTGTTACAAACAAG--TAA-TTATATGCCCCCCCCCCCCCCGAAG------------AAAC-GT-------A-----AACTTGGATTATTTCATCAA-TACTGTAAACCA-TTTCCCATGGAGAAACCT----ACC-AAAAATCA-TA-CAACA-AG-TAACGTTTATGTAT-CGGAATGG-ACTG-TCATTGAAAA----TGAAAAAAAGAT-AACAGTA----TCATCAT-AAAAGAAACGG-ATAAAA----GCAGCTCT-GAAGTTGAAATGGACCGTGA-ATATTA-CAAAT-CATTGTGTCT------TGCAGTG-CTA-GAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-A-GAA-GTCTTGC-AAAAACTTGAAAAA---ATCAT-CACTGAAAATGAAGA-TAA-ACTAACAACC-AG-GAAA-CATCTTGC-----CTTTT------GAGATTTAAAACGAA-AAC---CAGTAACTTT--TATATT-TTACCAAAAATACAT-AAAGTCATGTCATAAACG-AC-AAATGCAAAGA-TTTG-GAATC-C--T-CAT--------------------ATGTTCAGTTGCTCTT--ATAATTAGAACCATTTTCGCGGGA-CCTACC-TGCG-AAA-CTAATA-GAATTAGCTACCTCTTAGAT--T-TAT--TAGTGACG-CCATT-C-ATTA-CCAGATT-T-CAGAA-TTACATCAGATAAACCG-TAA-ACT-TTCTTATTTCACT---TCCAGAGGAAATTAACT-----CGGAATC-CATATTAGTCTCA-TTTGATGC-CACGAAC-----CTCTA-TT-CT-AA---T--ATTCGTC-ATAAACTCGGACTAGCCACCAATGAATATTGGATGGACTGTTTTCC-CCA-TCTTTAACTCG-AGATATT-T---CCT------AAAGAATTCG-----TCA-TATCAAGTC-TGAAATTAAT-CTAGAAAATAAC-ATCATGTATTTT---GATGAAACTAT-TTACAGACAGAAGCTTGAC-ACTGTCATGTGAACCAAAGTTGCTCCAAGAGAAATTAT--CTACA---GTTC-----------------GAGAAA-----------CATTTGG-ACAAGA-CTCTG--AAAACTTT-------------TTGAAACAATCGTTGAACTTTTTTTTTGACGATTGTT-TTATCATTTGGGCCAGAGGAGAGGACCAATT--AATGGAGT-TTT-TC-AATATTCTTAATA-C-GCTAAGTCCTACCATGAAATTCACCATGGGATC-------------CA---------ATAGAAATATGTTGTCATTTCTTGATGTCATGGTTATTAAATGAGAGT--ACCGCATAGTAACAGACGTGTTCTGCA-AATTAACAGA-TACCAGACAATACCTTAT-GCTTCATTAC-TGTTACCCTTAAG-ATGCT-----ACAATA---GTCCATACAATTTGGCAAAAC-GTCTATGCA-CAA-TCTTTTCTTATGCTGAAA-TCC--TCAAAAG--TCGCTTAGCAAAATTACAG
gi|14 : aatatagaagaaataaccCTGATGCTGAAAATCC--TCAATATAGTCGCTTGGCGGAATTACaatgcattattacaacgacgttaccaagtgcaattaattaaaaacggtttcaacaaagctaaatcccaggatagaaaggttcttcaagtaaaatccaaacctcgtca
gi|16 : CTGATGCTGAAAATCC--TCAATATAGTCGCTTGGCGGAATTACtaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatcacaacatcaactttctacatcctcat
gi|17 : GCATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTT-TG-AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTT-GGACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAAACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-Ttaatgcactactacaacgacgttaccagtacaattaatcgaaaaacggattcaacaaagctaaatctaaggaaaagaaaaagatcttcaagtaaaacccaacctcgtcatgtgtattaccattacgtttcaacgcacaatccaaaaatcacggaagtttttcaggttattaataataacctccctattttagaagaagcccagatataaaaaaaaatattggaatcaactaaaaatcatcaaaagtaaaacgtcaaagctcttctccaaaccattctaccagagccagtgttttcagcaccagcagtgaaatccctattgtcagcaaatgctagataaacccaagtgcacccacgtgcccatatttaaaaccccgggatctcaatttttattttcaaaaatggaagcaatttacagtggaaatca
gi|18 : CATTTT---GATGAAACTATATTACAGACAAAG-CTAGGCCACTGCCATGGGAACCAAAGTTGC-CC-----AAGTTATGGCGACATTGGTTTTTTAGG-TTATTAGGAAGAGAAATTATTTTCTACAGTTCGA-GAAATA-TTTGGACAAAACTTT-TG-AAATCTTTTTCAAAACAGTCGTGGAAACGTTTTTTGGACGATTTTT-TTATTAGTT-GGACAA--GAGAAGACCAGTT--AAC-GAGT-TTT-TCGAATATTCTTAATTACGACTAAGTCCTACCTTGAAATTTACCATGGAGTC-------------CA---------ATAGAAATATGCTGTCCTTTCTTGATGCCATGGTTATTAAGAGACAAACCGCAA---GGTAACAGACGTGTTCTACA-AATTGACAGAGGACCAAGCAATACCTTATGTTTTTAATCC-TGTCACCAAAAAC-AGACTAAAAAACAATA---TTCCATACAATTT-GCAAGAC-GTCTCTGCACCAA-T
gi|19 : AATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCC-ACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATCAGAGTAA-TTTTATGCCCCCC--------AAAGG-----AC--GCAAAT-GGT------A-----AATTTAGATAA-TTCATCGACTACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTACTA-CAA-A-AAATAACGTTAACAAATCCGGAATGG---T-----TTGAAAA----AGAT-AAT--AC-ATCA--A----TCATAAT-A
gi|2 : aatatagaagaaataaccAACGACGCGGACGCATTTTGTAGACGATTACGA-CTAGCT-AATTTTTCTTG-GTAAGGAAAAT---GATGACG-CATCTATT-TTGCCAACAAAAGTAA--TTTATGCCCCT----------AAGGTAGAAACCAT-AAATAATT------AACATTAATTTAGATAAATTTGTTAG-TACAGTACAATAATTTCCTGTTGAACAACTT----AAT-GCAAATTG-TGTCA--A-AAACAATTTTAAAAAGT-CGGAATGGAA-TGCT-ATTGAAAACTT-AAA-AAAT-GACGATAAC-A----TCATAATCAAG-GAAGCCG-ATAAAG----GTGGTGC-AGTTGTTATAATGGACCGAAA-TTATTG-TAAAA-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AAAAAAA-AA--AAAA---AAAG-CAAACATA---TGA-TTC---TAA-A-GAA-GTCATG-AAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAAA-GAAA-CTGATTACCT--ACTCTC------G---TTTGATGTTAA-AAC---CAGTATTTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTAACG-AT-AAATGCAAAAA-TTCC-G-ATT-C--ATCATAT-AT---AAGT-GTTGA-AA-GCCCAACAGACCTC--AAAATCAGACCTATAGTTGCGGGA-CC-ATCATGTG-AAA-CTCACA-GAATTAGTTATCTAATATAT--G-TAT--TA-TCAAA-CCCTTAT-GTTG-ATAAGGC-T-CAAAG-TTACATAACAGATACGA-TAG-ATT-TTCTAAA--CACTCTTCCCGGAA------AAGTCAACACGGAATC-AATTTTAGTGTCA-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATTTCAC-ATGAACTAGGATTACCCGCCATAGAACATTGGATAGACAGATTCCC-AAA-TCTTTTAAACG-ATAGATT-T---CCT------AAAGAATTTG-----ATT-TAAAAAGTC-TAAAATTAATCCTAGAGAACAAT-TTTATGCATTTC---AATGAAATGGT-TTACAGACAAAAGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCC-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AAGAAAAATTGTACTCTGTTGTTAAG-GAAAAG-TTCGGACAAAAC-TT-TG-AAACTTCTATTAGAACA-TCATGGACACGCTATTTAGACGACTTTT-TTATCATTTGGGACAAAGGTGAAGATCAACTAAAAC--AAT-TTT-TTG-ATATTCTAAACT-CT-CTGAGCCCTACAATGAAATTTACAATGGAATC-------------GG---------ATAGAAATCAGCTAGCATTCCTTGACGTGATGGTGATGAAAAAAGAAA--GTAACATTGTAACCGATATCTTCTACA-AAATAACGGA-TACCAAGCAATA-CTTAT-TATTTGATTCGTGCCACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAT-GTCTTTGTA-CAA-TAATATCAGACACTACAA-TTA--TCAATAT--TAGTCTCGCGGAATTAGAG
gi|20 : C-CAT-TGAGTCTTA-ATTGATGC-CACAAACACCAATCCTA-ATACT-AG---T--ATTTCTC-ATAATCTAGAATTAGCCGCCATAGAATAATGGATATGCTGATTTCC-TAA-TCTTCAACACG-TGAGATT-TTCACCT----------CATTTG-----TTA-CATCGGGTG-TACAATTAATCTTGGAAAACAAT-TTTA------------ATGAAAATGT-TCACAAACGAATGCTGGCC-ACTGCGATAGGAACAAAA
gi|22 : acaggattagTA-AT-CTGAA---T--TTTCCAT-ATGATATAG-ATTAGTCACCGTAGATCATTGCGTAAAA---------AAG-TCTTATGCATG-ACAGATT-T---CCT-------AGGAATTTA-----TTT-TCAATTGTC-TACAGTT-------------GAT-TTCATTCATTTTAAAAATGATATGAT-TCATATACAAAAGTTAGGT-ACTGGGATGAGATCCAAAGGTGTGCA-----GACCTGTG-GAACACTCTTTTT--GGGATGTTT
gi|24 : TTATAT--T-TAT--TGCTGAAA-CCATT-C-ATCA-CCAAAGT-T-AAAAG-TTACATCAGAGACACCG-TAG-ACT-TTCTAAATTCACT----------------AACT-----CGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---T--ATCCCTC-AAGACCTCGGACTAGCCGCCATTGAATATTGG
gi|25 : cAATGACACGAGCGCGTTTTGCAGAAAGCTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATAAGAGTAA-TTTTATGCCCCCC--------AAAGG-----AC--G-AAAT-G-T------A-----AATTTAGATAATTTCATCG
gi|27 : aatatagaagaaataaccATGGATTTT---GATGAAATTAT-TTA-----------TAGGC-ATGGCAATGGGAACTAAAGTTGCGCC-----CATTTATG-TAGCA-TCGTTTC--AGACTTTTTAC-CAAAAAAA---TACTCTAC---TAAA-GGAAAA-TTCACACAACATTCTGTGCAAAC
gi|28 : CCAC-TTGAACTAGGATTTACCGCCATAGAACATTGAATAGATC----TCC-AAA-TCTTTTAAATG-ATAGATT-T---CCT------AACGAATTTG-----CTT-TAAACAGTC-TAAAAAAAATCCTAGAGGATAAT-TTTATGTATac
gi|29 : TCTATTGTAGCCAACAAAAGTAA-TTGTATGCCCCCT--------AAAGG-----TG--G-AAAC-CAT------A-----A-TTTAGATAAATTTGTCAG-TACAGTACAACAATTTCCTGTCAAACA
gi|3 : TTGACAGA-TACCAAGCAATACCT-AT--GTGTCATCC-T-TCACCCAAAACCATACT-TAAAACAATAATATTCCATACAATTTGGCAAGACTGCCTCTGCA-CAATTAGTTTCTGATGCTGAAA-TCCGTCCAATAG--T-G-CTTGCGGA
gi|32 : atAATTTTCTCAATA-C-ACCAAATCCTACCATGAAATGCATCATGCAATC-------------CA---------TTAGAAACATGttgagcagatgccgactactacaacgagttacccagtacaatttaatcgaaaactgtgtattcgaaacaaagctaaatctcggaaagaaggatcttctttcagtagaaccaaacctgcgtcactagtgctttactccaactttcaaaagcacaattccaaaaaattcggaagtttttcaggttattaatatataacctcgccattttggaagaagacccagatttgaaaaagaaattactggaacaacataaatcatcaaaatgaaacgtcaaagcccttcatcttcaaatctcttctaaccagagcagtttttacaacaccagcagtgataattcccttattgtcaagcaaatgtagataaacccaaagtgcgctccccgtgccctaatttaacttactaacacttggatctcatttattttcaaaaacggagcagtgttatattatacaggaaatcatccatgacgtgccctcttctcaacatctttatgtgtaataactgtgcgaccgcgctgctggaggaaaattacatcggctcagacagcgaacctttacgtcacagcgatggactgtccaccgtcaaccaataagagaaccaaaataccagtgtaccaaagtcatggaaatattcgaaaactgtgcgcaaaacattgtcagtccgaactgtctaaccagttttccccttattacaaattcttgaaagatacacgtggaaacagaaacgtgaaacaaaagaaaactgttctattcgaggatacaataacctgcgtaaatgctgcactacttgtaaacttctctgaaaattatttttcagggaacttgccccgcatttaacgtaaaggtcaaattgtatttacagtaatcaattgtcatatttatattatgtttaaacagtccccttactcattgtacatactatgtccctacccccctaatcccccccattagatgattactaaataattggtaccaatttatgcatatgccctggctattattattcttacatatactaaccgattttgtatacttttggtaatgtgcgcaacttaaggtgcgaattcccccccc
gi|4 : AACGACGCGGACGCATTTTGTAGAAGATTACGA-CTAGCTGAATTTTTCTTAGATAAGGAAAATG---ATGACGCAA-----------CAACAAAAGTAAATTTTATGCCCCCA--------AAAGG-----TA--G-AAA--GTTCAAACCAT----AATTTAGATAAATTTGTTAG-TACAGTACAACAATTTCCTGTCCAGCAACTTTTAAAAT-GCAAATTG-TG-T--CAGAAACAATTTCAATAAGT-CGAAATGG-AACGCT-ATTGAAAACTTTAAA--AAT-GAC-GTCA--ACATATCATAATCAAG-GAAGCCG-ATAAAG----GTGGCGC-AGTTGTTATAATGGACCTCGA-TTATTA-TAAAT-CAATGTGCCT------TTCTATG-TTA-GAGGACAGTA-AATACTA-TG--GGAA---A-AGTCAAACATA---TGA-TTC---TAA-A-GAA-GTAATGAAAAAAACTCGAAACA---ATTGT-TGATGAACACGGACAG-AA-ACTTACCGCTAAA-GAAA-CTGAATACCT--ACTCTC------G---TTTAATGTAAA-AAC---CAGTAATTTT--TATGGC-TTACCCAAAATACATAAAAACCAAGTCATTACAG-AT-AAATGCAAAAATTTCC-GAGTT-CAAA-CATAT-ATAAAAAGTGGTTGA-AA-GCCCAtcct
gi|5 : cttttcaaattctaatgaaaatgtggaaaaatgaatgtttgtgcgaggaactaaaatccatagaacgatggataaaatccgataaatggtttcaaagttacgaagcacaatttaaaaaagaacatcaagacaaaaatcccttcataaaatcaggtaaattccagccagacaacataaataggaaggagacaaacaggtaccaacccacggtagaatccaacttaaaccgcagaaaatatccgtcaagccggaaccagacggatgacaatattagacaccagggacgcccacagatccctttccacgagcgaccatacaaacggaacaacaatcggcagggaagtattatcacgcgcaaaaattcttttttaggatatggccccagacaaaacgatattagatagcacaaaatatagaaaaagacctgaaacctgacattaaagttactaatttatatatctaacgaatattaacagaaaatgaaattaatgtacttgaaaaaggacttatattcacccccaccccgcgcataaaaaatacagaggaaattaaaAATGACACGAGCGCG-TTTGCAGAAAGCTACGTATTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAATATGA-TAA-TTTTATGCCCCCC--------AAAGG-----AC--G-AAATGGTT------A-----AATTTAGATAATTTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACCAAAAAATTA-TA-CAACA-AAATAACGTTAACAAATCCGGAATGG---T-----TTGAAAA----AGATAAAT--AC-ATCA--A----TCATCAT-AAA-GAAGCGGAATATAGCAGTGCTG-GCTAGTCGGTA-GATGGACCGTGGTGTATT--TAA---CAATATATCTTAGGTGTGCCGTGCCTC-GAGAACAGAATTACATTACCGGTAGAAACCACAG-CGAGAGTACGTTGACCTCATATAACA-GAGTGTCTTGCAAAAAACTTGAAAAATACATTGTCCAATGAA-ACGGG-AGTAACACTTACAATCAAGAGAAATCAGA--ATCTACACTCTCTTGAGAA---TTTAAAGCGAACAACAAGGAGTAACTTTTCTATTGCGTTTCCAAAAATACATAAAAGTCAAATCAT-AACGTACTAAAGTTAAAAA-TTCGAGAATCAC--A-CCTATAAT---ATGT-ATTGACAATGTCCAGATGATCTTAAAAAATTAGCCCAATTGTTGCGGGACCC-ACC-TGCGAAAA-CCGACAGGAATTAGTTCTCAATTATAA--T-TATTGTGCTGAAACCCATT-C-ATCA-CCAAAGTATAAAAAG-TTACATCAGA-ACACCGTTAGTACTGTTCTAAATTCACT----------------AACT-----CGGAATCTCATA-TAGTCTCATTTTGATGTGCACGAAC-----CTCTATCT-CT-AATTCT--ATCGCCT-AAGACC-GGGATGAG-CGCCATTGA--ATTGATTAGACCGTTTTCCTACATTCTTTTACACGAAGAGATTGT---TCTGATATAAGAGAATTTGCACTCATC-TATCAAGTCTTAAAATTAATTGTTGGAAACAAG-CTT---CATTGC---AATaacagacatcaaaa
gi|6 : aatatagaagaaataaccAATGACACGAGCGCGTTT-GCAGAAA-CTACGT-TTGGCTGAATTTTTCCTACATCACGAAGATGGAGAAGACG-AATCTGTTGTTACCAACA-GAGTAA-TTTTATGCCCCCC--------AAAGG-----A-----AAAT-GT-------------AATTTAGATAA-TTCATCGA-TACTGTAAAACATTTTCCCGTGGAACACCTT----ACC-AAAAATTA-TA-CAACA-AAATAACGTTAACAAAT-CGGAATGG-A-T----ATTGAAAA----AGATAAAT-AAC-A-----A----TCATCAT-AAA-GAAGCGG-ATAA-G----GCAGTGCTGGTAGTCGTAATGGACCGTGA-GTATTAACAAATTCATTATGTCT------TGCCGTG-CTACGAGAACAGTA-CATACTA-CG--AGAA---ACAG-GAATCGTA---TGA-CTC---TAA-AAGAG-GTCTTGCAAAAAACTTGAAAAA---TACAT-CACTGA-TACGGA--GTAA-ACTTACAATCAAG-GAAA-AATCTTAC-----CTTTT------GAGATTTAAAGTGAA-AAC---AAGTAACTTT--TATGGT-TTACCAAAAATACATAAAAGTCAAATCATAAACG-AC-AAATGTAAAAA-TTCG-GAATC-C--A-CATAT-AT----AGT-ATTGA-AATGTCCAGATGATCTT--AAAATTAGACCCATTGTTGCGGGA-CC-ACC-TGCG-AAACCCAACAGGAATTAGT--TCTCTTAGAT--TATAT--TGCTGAAA-CCATT-C-ATCATCCAAAGT-T-AAAAGTTTACATCAGAGA-ACCG-TAGAACT-TTCTAAATTCA-TC-------AT------AACT-----CGGAATC-CATATTAGTCTCA-TTTGATGT-CACGAAC-----CTCTA-TT-CT-AA---TAAATCCCTCAATGACCTCGGACTAG-CGCCATTGAATATGGGAT-GACCGTTTTCC-TCA-TCTTTTACACGAAGAGATT-G---TCTA-----AAAGAATTTC-----ATCATATCAAGTC-TTAAATTAATGCTTG-AAACAACATTTATGCATTT
gi|7 : aatatagaagaaataaccGTTGT-TATTAGATGAT-TAT--T----AAA-TCTTT-AAGTTG-ATAAGGT-T-CAAAG-TTACATAAGAGATACGG-TAT-ATT-TTCTAAACACAATT--CCCAAAACAGTC-AACA-----CAGAATC-AATTTTAGTTTTG-TTCGATGT-TACTAAC-----CTCTA-CT-CT-AA---T--ATCCCAC-ATGGACTAGGATTAGACGCCATAGAACATTTGATAGATAGATTTCC-AAA-TCTTTTAAATG-ATAGCTT-T---CCC------ATAGAATTTG-----TTT-TAGAA-GTC-TAAAATTAAACCTAGAAAACAAT-TTTATGCATTCC---AATGAAATGCT-TTATAGACAAAGGTTAGGT-ACTGAGATCGCAACTAAAGTTGCGCC-----GATTTATG-CTACACTCGTTGT--AGGATTTTTAG-AAAAAAAATT-TACTCTGTT-TTCAAGGAAAAG-TTTGGACAAAAC----TG-AAACTTTTATTAGAACA-TCATGGAAACGCAATTTTGAC-ATCTTTGTTATCAATTGGGACAAAGGTGAAAATCAACT----C-AAATATCTGTTGGGTATTCCAAATT-CT-CTGAGCCCTACAATGATATTTACAATGGAATC-------------GG---------ATAGAAAT---CAG-CATTCCTTGACGTTATGGTGATGCAAAAACAAA--GTAACATTGTAAGCTATATCTTCTACA-TAATAACCGA-TACCAAGAAATAC----T-TATTTCATTTGTGCCGCTCTAAAC-ATACC-AGAAATAATA---TTCCATAAAACTTAGCAAGGC-GTCGTTTTA-CAA-AAATATCAGACACTAAAT-TTC--TAAATAT--TAGTCTTGCGGAATTAT
gi|8 : ACAAAGTC-TAAAATTAATTTTAGAAAACAAT-TTTATGCATTTC---AATGAAATGGT-TTNCaaaattacttctgcaaagaagctaccttaactaagaaag
gi|8 : C-TAAAATTTATCTTAGAGAACGAT-TTTATGCATAAC---AATGAAATTGT-TTATAGACAAAGGTTAGGT-ACTGCGATGGGAACTAAAGTTGCGCT-----GACTTATG-CAACACTCGTCTT--AGGATTTTTAG-AA-AAAAATGGTACTATGTTG-TCAA-TAAAAAGTTCGGATAAAAC-TT-TG-AAACCTTTATTAGACCA-TCATGGAAACGCTATTTACACGACTGTT-TTATCATTTGGGATAAAGGTGAAGATC-----------------T-TTG-ATATTCTAAACT-CT-CTGAGCCCTACAATGAAATTTAAAATGGAATCGGATTTGTTACTTCGCCATTTTATATAGAAATCAGCTAGCATTCCTTGACGTTATGGTGATGAAAAAATAAA--GCAACATTGTAACCAATATCTTCTACATAA--AACGGA-TACCAATCAATATC-TAT-TATCTGATTCATACAACCCTAAAC-ATACC-AGAAATAATA---TTCCATATAATTTAGCAAGAC-GTGTTTGTA-CAA-TAATATCAGACACTGAAA-TTC--TAAATAT--TCATCTCGCAGAATTAGAGtaaaatttatcttagagaacgattttatgcataacaatgaaattgtttatagacaaaggttaggtactgcgatgggaactaaagttgcgctgacttatgcaacactcgtcttaggatttttagaaaaaaatggtactatgttgtcaataaaaagttcggataaaactttgaaacctttattagaccatcatggaaacgctatttacacgactgttttatcatttgggataaaggtgaagatctttgatattctaaactctctgagccctacaatgaaatttaaaatggaatcggatttgttacttcgccattttatatagaaatcagctagcattccttgacgttatggtgatgaaaaaataaagcaacattgtaaccaatatcttctacataaaacggataccaatcaatatctattatctgattcatacaaccctaaacataccagaaataatattccatataatttagcaagacgtgtttgtacaataatatcagacactgaaattctaaatattcatctcgcagaattagagaaattactactgtaaagacactatcctaaaaagataattaaaattgaaattaacgaagcaaaatcacatgaaagaaaggacctcctta
13 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): TCATTCATGACGTGCACCTCTTCCAACATCTTGTATGTAATAACTTGTGCAGGCTGTGGAGAAAATTACATCGGCCAGACAGGCGACACCTTACGTCACAGGATGACTGTCCACCGTCAACAAATAAGAGAACCAAAGTACCAGTGTACTAAAGTCAGTGAACATATTCGAAACTGTGCCAAAAATTATCATCCGAACTTTACCGTTTTCCTCTTTTACAAATTCTTAAAAGATACCACGGAAACAGAACGTGAAACAAAAGAAAAACTGTTTATTCGAGGATACAAACCTGCGCTAAATGCTACACAATTGTAAACTTCTTTGAAAAATTATTTTCAGAAACATTCCCCCGCATTATACGTAAGGTCAGAATTTATTTACAGTAATCAATCTGTCATATATTATGTTTAAATGTCCCCCTACTACAATTGTACATACTGTGTATTGTATATGTCCCCCCCCCCTTTCCTCTTTCTCCCTTCCATTAATATTATAAATATTGTACAATGCATGCATGCCCTCTTATTATTATATATTCTTACCATTTTGTATATTTCAATATTTGTGTAAAGTATGGCGACCCCCCC
Unaligned ( gi|10 ): CTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACCAAAGACAAAAACTAGGAGCTTCAACCATAACAAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCGTACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAAACACCACAACGTTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGAACCCAACCGAATTTTGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATTCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCCACACCACGCCAAAA
Unaligned ( gi|11 ): AACTTTCTACATCCTCCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACGAGATGGGGAAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCCAATTCAAAAAGGAACACAAAAGACAAAAACTAGGAGCCTTCCACACCATTAACAACAATAGAGTGGACCCGAACAAGTCACAGCCCTGAATACGGATGCCTTTCCGTTTCCCTCACCACAGCGTTCCCGGACAATATGATTAGGAGCGGAAAACCGCCCCACAAATTCCATTCCAATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTTTTTTTTTAGGTATGGCCGCAGACCCAACCGAATTTTGATAGCAACAAAACAAAGAACAGGAGAAAATCCAACCCCAACATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCACACCACGCCAAAA
Unaligned ( gi|12 ): TTTCACATCCTCATGAAAAATGGAATGATGACTTTTTGTGAAGACAAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAAACCCAATTCAAAAAGGAACACACAAAGACTAAAAAACTAGGAGCCTTCAACCAGTAACAAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAAGACATCACCAACGATACAGAAAACAGCGTTGAAACACCACAACGTCTAGAAATTTTTTTTTAGGATATGGCCGCAGAACCCAACCGAATTGGATAGCACAAAACAAAGAACAGGAAAAAATCCAACCCCAAATAATAAATGTATCAAAACGGACATTGACTGATCATGAAAATTAGGATACGTTGAAAAAGGACTAAAATTCACTCCCACACCACGCCAAAA
Unaligned ( gi|13 ): AACTTTCTACATCCTCATGAAAAAGTGGAATGATGACTTTTTGTGAAGAACAAAAGTCACTACAGAGATGGGGAAAATCTGAAGCATGGTTCCTGAAATATGAGACCCAATTCAAAAAGGAACACAAAGACAAAAACTAGGAGCCTTCCAACCAAGTAACAACAATAGAGTGGACCCGAACAGTCACAGCCCTGAAATACGGATGCCTTTCCGTTTCCCGTCACACAGCGTTCCCGGACAATATGATGATAGGAGCGGAAACCGCCCACAAATTCCATTCCATGAACGACATCACCAACGATACAGAAAACAGCGTGGAAACACCACAACGTCTAGAAATTCTTTTTTTAGGATATGGCCGCAGAACCCAACCGATATTGATAGCAACAAAACAAAGAACAGGAAAAACCAACCCATAATAAATGTATCAAAACGGACATTGACTGATCATGAAATTAGGATACTTGAAAAAGGACTAAAATTCACTCTCACACCACGCCAAAA
Unaligned ( gi|15 ): ATCTAACAAGAGCCTGTTTTGCTAGTCAACATTAAAGATTTTCCCGTCAATCACTAAATGCTACAAAACCCAACATGCGCCTACGTGCAAATACAGAAACTCAAGGATCCGAATTTAGATTTTCAAAAAACGGCCAGTAGAATTTACAGTAAAATCATCAATCACATGTGTTTCGTTCCAATCTGATATATGTTATTACCTGCCGCCGGGGACGTGGTGAAAATTATTTATCGATGAGACACGGACACACACTAAGGACATCGGCGATTTGACCGAATTTCACCGAAAAAAACCAACCGAGAACCTAAATATCAGTGTTTACCACATCCTAAATTGTTGCCAAAAATGTCTATCCGAATTTTACAGTTCTTTCATCTTATAAATTTCGTCAAGAACCACGACAGAAAAAGAACGTGGAAAACCAAAGAAAAACTATTTATTCAAAAAATATAAACCACTTCTAAACTGCAAC
Unaligned ( gi|21 ): CAGTCATGACGTGCACCCCCCCCCCCAACATTTAATGTATCATTATTTGCGCCGACTGTAGATAAAATTACATCTGTCAGACAGGCAAAACACTATGATATAAGATGACTGTGAACTGTGAACAAATAAGAGACAGTGAACATATTCAAAATTATCTCAAAATCTTAATCCAAACATTATCACTTTCTCTGGACAAATTCCTAATATATCATATA
Unaligned ( gi|23 ): GTATATCATTACTTGCGTCGACAGTAGAGAAAATTACGTCAGTCAGACAGGCGAAACGCTACAATATAAAATGGCGAAGTAACAATGTATTAATATAAAATGACGGTGCACTGTGAACAAATAAGAGACAGTGATCATATTCAAAACTATGTCAAAATGATTTTTCAAAACATTATCACTTTACAAATTCCTAATATACATACATCA
Unaligned ( gi|26 ): TATCAGTGTACCCATGTAAGCAAATTAACACATCCGAAATTGCGCCAAAAATGTTTATCCAAATTTTACCATTTTTCCATTTTATAAATTTCATAAAGACACAACAGAAAAAGAAACTTTTTTTTCAAAAATATAAAC
Unaligned ( gi|30 ): GTAAACTTCTTTGAAATTTTATTTTCCGAACATTTTCCCGCATTATACGTAGGTCAGGAATTTAGTT
Unaligned ( gi|31 ): ATATACAGTAAAATCATCAATGACATGTGTTCGTTCAAATCAGATCTATGTTATTACCTCCGCCGG
Unaligned ( gi|33 ): ACCCTAAAAAATTTATTGAAAATGGAATTAATGAAGGAAAATCACATGAAAGAAAGGACCTCC
Unaligned ( gi|34 ): TGAAGAAAATTCATTAATCGGAATGTTGAGGAGTTGTTCAG