lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 11 11 1 2 11 1 11 22222 111 1 2 1 222 111 1 222222 111 1111 22 111111 444444444444444444444444444444444444444444444444444444 1 11111 1 1 33333 111 2222 2222222222 1111 222 1 11 2222222 22222 11 2222 22222 111 11 1 1 111 1 44444444444444444444 111 1111 111 1 111 3333333333 1 11 11 11 2222 2222 1 1 1 1 1111 1 11 1 1 11 11 11 44444444444 11 22 11 111 1 1 3333 11 2 1111 111 111 2 111 1111111 2222222 1 222222 444444444 1 1 6666666666666666666666666666666666 111 1 2 22222 1 3333333 1 1 11 11 1 222222 333 1 2222 11 1 1 11 1 11 11 333333 111 11 1 22222 1 1 1 5555555555555555555555555555555555555555555555555555555555555555555 1 222 1 11 1 222222 1 2 1 1 11 1111 1 11 33333333 1 1 111 22222 1 2 11 1 1 1 11 22 1 3333333333 4444 11 2 1 11111111 11 22222 11 22222 11 11 11 111 222222 1 2 11 22222222 111111 22222 22222 2222222222 1 1 2222 1 11 11 222 11 11 11 11 1
lowQualScore : 555 8 8 8 11 11 0 8 11 6 8 8 0 8 11 8 5 44 00000 3 444 3 6 99 0 6 99 3 99 333 111 3 000000 6 6 111 6 4444 22 6 999999 999999999999999999999999999999999999999999999999999999 99 3 66666 9 3 33333 666 6 6 555 6666 3333333333 4444 4 77 000 5 1 55 5 6666666 5 66666 55 77 77 4444 77 5 77 5 5 5 5 88888 000 00 5 5 1 5 1 5 4 000 2 5 5 5 4 7 99999999999999999999 000 7777 444 6 444 8 8 8 8 1 5555555555 5 0 8 8 44 11 8 11 44 5555 8 8 0000 3 0 0 0 2 0 8888 1 3 0 9 2 11 5 0 88 77 44 6 99 6 11111111111 8 33 0 8 77 11 0 9999 111 0 0 8 3 1111 11 0 0 7777 444 444 0 444 0 9999999 0000000 8 1 333333 666666666 8 0 0 0 6666666666666666666666666666666666 444 6 0 00000 0 0 2 2 2222222 99 0 5 6 33 3 1 00 0 888888 111 55 0 3 1111 33 0 2 2 0 7 88 3 88 6 88 888888 777 88 7 7 6 3 77777 7 7 3 3 7 5 6666666666666666666666666666666666666666666666666666666666666666666 2 3 0 777 66 5 5 11 0 333333 2 0 0 0 0 88 4444 2 8 0 0 88 44444444 0 0 777 7 55555 0 8 8 3 99 1 2 0 33 5 0 0 66 77 88 99 6 6 3 6 99 99 8888888888 6 4444 6 6 8 11 0 0 0 8 99999999 11 0 0 00000 8 88 8 11 00000 8 88 8 11 3 0 0 99 8 8 8 444 333333 8 8 5 8 4 11 6 77777777 666666 8 22222 00000 0 8 9999999999 6 1 44 8 0 6 8 3333 6 8 8 44 5 3 44 0 3 8 5 8 8 6 8 8 11 0 8 222 8 11 11 99 66 0
lowQualScore : ... . . . .. .. . . .. . . . . . .. . . .. ..... . ... . . .. . . .. . .. ... ... . ...... . . ... . .... .. . ...... ...................................................... .. . ..... . . ..... ... . . ... .... .......... .... . .. ... . . .. . ....... . ..... .. .. .. .... .. . .. . . . . ..... ... .. . . . . . . . ... . . . . . . .................... ... .... ... . ... . . . . . .......... . . . . .. .. . .. .. .... . . .... . . . . . . .... . . . . . .. . . .. .. .. . .. . ........... . .. . . .. .. . .... ... . . . . .... .. . . .... ... ... . ... . ....... ....... . . ...... ......... . . . . .................................. ... . . ..... . . . . ....... .. . . . .. . . .. . ...... ... .. . . .... .. . . . . . .. . .. . .. ...... ... .. . . . . ..... . . . . . . ................................................................... . . . ... .. . . .. . ...... . . . . . .. .... . . . . .. ........ . . ... . ..... . . . . .. . . . .. . . . .. .. .. .. . . . . .. .. .......... . .... . . . .. . . . . ........ .. . . ..... . .. . .. ..... . .. . .. . . . .. . . . ... ...... . . . . . .. . ........ ...... . ..... ..... . . .......... . . .. . . . . .... . . . .. . . .. . . . . . . . . . .. . . ... . .. .. .. .. .
lowQualScore : 888 0 0 0 00 00 8 0 00 0 0 0 0 0 22 0 8 00 00000 8 000 3 7 22 0 7 22 3 22 333 777 3 555555 7 7 777 7 2222 55 7 222222 555555555555555555555555555555555555555555555555555555 22 3 77777 2 3 33333 888 7 7 000 0000 7777777777 4444 0 99 000 7 4 77 7 7777777 7 11111 77 99 99 3333 99 7 99 7 7 7 7 11111 000 00 7 7 4 7 4 7 3 000 0 0 7 7 9 9 00000000000000000000 666 0000 000 0 000 0 0 0 0 0 0000000000 8 6 0 0 00 88 0 00 88 0000 0 0 8888 2 0 0 0 5 0 0000 2 2 0 8 5 88 5 0 00 55 55 7 22 7 88888888888 8 88 8 0 00 00 8 2222 888 8 6 0 6 0000 00 8 0 0000 000 000 4 000 6 4444444 2222222 0 2 000000 000000000 0 0 6 8 2222222222222222222222222222222222 000 0 4 00000 0 8 5 5 5555555 00 0 5 5 88 0 2 22 0 888888 222 88 0 5 2222 88 0 5 5 0 3 33 3 33 7 33 333333 777 33 3 3 7 3 77777 3 3 3 3 3 0 5555555555555555555555555555555555555555555555555555555555555555555 5 2 0 555 55 0 0 00 0 000000 5 0 0 0 0 00 8888 5 8 2 0 00 55555555 0 0 555 0 00000 0 8 8 2 00 2 5 0 88 0 0 0 55 00 66 22 7 7 3 7 22 22 2222222222 7 2222 7 7 0 00 0 0 8 0 88888888 00 8 8 00000 0 88 0 00 44444 0 22 0 00 8 8 8 00 0 0 0 000 000000 0 0 0 0 0 00 6 66666666 000000 0 88888 44444 8 0 2222222222 6 2 66 0 6 2 0 4444 0 0 0 22 6 2 66 8 8 0 0 0 0 0 0 0 00 8 0 000 0 00 00 00 88 0
consensus : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TACTTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCANCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCT--CT--CTGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCCC-C------GCAGTCT--T-CG----AATC-TTAT-------TCCAGTG--GCTT--TCGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-AC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC-C--CAT-----AA---TTTCGTT-GA-AGGAAGTTAA--G---C-GC-TG--TC-T---T---GGTAGTGCT-TTN----CATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GCGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CG-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAA---CAAGAGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTGGCCATTTCAGAC-TCAAA--TTCG-CCCA----CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACCTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGA--T--G-----CGCAAAAACCGCCTCAT--ATATCAG-CTTGTG-CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCGCTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTTATCGT--GCG--TTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTTTC---AA--GG-ACTNTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA---CGCATAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGANAAAACC-TT-CATTTTGG------CCAATCA--CAGAGTCCGCT-TGACCTNCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTCGCCCTTCGTGAAACCTTTTTTCTCT--AGCGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATACGCTAC-CGTCTGACACAGTCATT-ACAATACCCGGTCCCCGACT------------A--------ATCT-------AA---------------ATATGGTGT---------ACACTTTGTTCACACTTTAGACAAATAAAATG-TTA--TAATGTTAAACAATAATTCAACAATTGAGTA--CNTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACGTT-GCGAGAAAA-GTGTAGGTTTTAATTG-A--ATTAAGCGGCGATTTTCAAGCGCGCAAATGACGAG-CTACATTTTTTA----AC--GACA-CATTG-AT---ATAGAGTAT-----AAGGGA-CGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAATA-TACACTA-AAAGAGTAATTATNNAGTAGCAGAACAT-GCTAAAACG-TCGTTATT-TCAT-A-G-C--TA--AC----TC----AATT-TATAACAT--TT-TATAAG-AAA-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TA--TATAT--ATAAATT-----TTGTAAATA-AATACC-AAAATGGCTGT-A--TTTG---CCTTTTAAAATG-GTGCTGGTAGTAT-A--CAGAAAACAAGAGTTAAACACA-AAAA-ACTGCATT-CAAAAA-GG---TA------A-AG-CACAAAAAAAAAGT-ATGCAACGC--TTGATATAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCAGCCNTTAATTT-CGAACNTTAGAAGGG-TG--GCATCCGG-CCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCACTTTTTCAGAAT-CGAGG
Reference ( gi|3 ) : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCT--CT--CTGGTC-ATT-TCTTG---TAA-AC----CAATA--CCCC-C------GCAGTCT--T-TG----AATC-TTAT-------TCCAGTG--GCTT--TTGGCT-------CT--GCA-GGGAC-----TTCGTTGAACAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC-T--CAT-----AA---TTTCGTT-GA-AGGAAGTTAA--G---C-GC-TG--TC-T---T---GGTAGTGCT-TTA----CATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAA---CAA-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA----CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGA--T--G-----CGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTTATCGT--GCG--TTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT-----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA---CG-ATAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC---CAGAGTCCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCATT-ACAATACCCGGTCCCCGACT------------A--------ATCT-------AA---------------ATATGG------------ACACTTTGTTCACACTTTAGACAAATAAAATG-TT---TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-GTT-GCGAGAAAA-GTGTAAGTTTTAATTG-A--ATTAAGCGGCGATTTTCAAGCGCGCAAATGACGAG-CTACATTTTTTA----AC--GACA-CATTG-AT---ATAGAGTAT-----AAGGGA-CGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAATA-TACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC--TCGTTATT-TCAT-A-G-C--TA--AC----TC----AATT-TATAAC----TT-TATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TA--TATAT--ATAAATT-----TTGTAAATA-AATACC-AAAATGGCTGT-A--TTTG---CCTTTTAAAATG-GTGCTGA-AGTAT-A--CAGAAAACAAGAGTTAAACAC--AAAA-ACTGCATT-CAAAAA-GG---TA------A-AG-CACAAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TG--G-ATCC-G-CCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|4 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCT--CT--CTGGTC-ATT-TCTTG---TAA-AC----CAATA--CCCC-C------GCAGTCT--T-TG----AATC-TTAT-------TCCAGTG--GCTT--TTGGCT-------CT--GCA-GGGAC-----TTCGTTGAACAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC-T--CAT-----AA---TTTCGTT-GA-AGGAAGTTAA--G---C-GC-TG--TC-T---T---GGTAGTGCT-TTA----CATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAA---CAA-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA----CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGA--T--G-----CGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTTATCGT--GCG--TTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT-----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA---CG-ATAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC---CAGAGTCCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCATT-ACAATACCCGGTCCCCGACT------------A--------ATCT-------AA---------------ATATGG------------ACACTTTGTTCACACTTTAGACAAATAAAATG-TT---TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-GTT-GCGAGAAAA-GTGTAAGTTTTAATTG-A--ATTAAGCGGCGATTTTCAAGCGCGCAAATGACGAG-CTACATTTTTTA----AC--GACA-CATTG-AT---ATAGAGTAT-----AAGGGA-CGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAATA-TACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC--TCGTTATT-TCAT-A-G-C--TA--AC----TC----AATT-TATAAC----TT-TATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TA--TATAT--ATAAATT-----TTGTAAATA-AATACC-AAAATGGCTGT-A--TTTG---CCTTTTAAAATG-GTGCTGA-AGTAT-A--CAGAAAACAAGAGTTAAACAC--AAAA-ACTGCATT-CAAAAA-GG---TA------A-AG-CACAAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TG--G-ATCC-G-CCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|2 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCT--CT--CTGGTC-ATT-TCTTG---TAA-AC----CAATA--CCCC-C------GCAGTCT--T-TG----AATC-TTAT-------TCCAGTG--GCTT--TTGGCT-------CT--GCA-GGGAC-----TTCGTTGAACAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC-T--CAT-----AA---TTTCGTT-GA-AGGAAGTTAA--G---C-GC-TG--TC-T---T---GGTAGTGCT-TTA----CATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAA---CAA-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA----CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGA--T--G-----CGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTTATCGT--GCG--TTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT-----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA---CG-ATAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC---CAGAGTCCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCATT-ACAATACCCGGTCCCCGACT------------A--------ATCT-------AA---------------ATATGG------------ACACTTTGTTCACACTTTAGACAAATAAAATG-TT---TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-GTT-GCGAGAAAA-GTGTAAGTTTTAATTG-A--ATTAAGCGGCGATTTTCAAGCGCGCAAATGACGAG-CTACATTTTTTA----AC--GACA-CATTG-AT---ATAGAGTAT-----AAGGGA-CGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAATA-TACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC--TCGTTATT-TCAT-A-G-C--TA--AC----TC----AATT-TATAAC----TT-TATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TA--TATAT--ATAAATT-----TTGTAAATA-AATACC-AAAATGGCTGT-A--TTTG---CCTTTTAAAATG-GTGCTGA-AGTAT-A--CAGAAAACAAGAGTTAAACAC--AAAA-ACTGCATT-CAAAAA-GG---TA------A-AG-CACAAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TG--G-ATCC-G-CCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|1 : CGTTA---TAGTAT-TTTC-T-CATTT--CTAATAC-T--GT--GTT-G--TA-TTCAGTTTT-TTTGTCAGTG-GT-CT--TCATCACCATCAAAGTTAGACAAACA-ACGT--AGTG-------TTCATTTCGAGCTCT---GCGACCG-CCTA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCT--TTTCCTGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTCC-C------GCAGTCT--T--GCC--AAT---TAT-------T---GTG---CAT--TCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAA-ACACTATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCC-CACCAT-----AGAGGTATCGTTTGATAAGAAATTAA--GGTAC-GCCTGGTTC-TAATT---GGTAGTGCT-TTC----CATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAA--AGATA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GCAAA--GATTTCC-AACTT-AAGCAGCCAACAAATTCACTGTCAGTTTCTCTGTG-CTCTCATGAAGCAAGTTTAAAATTAG-AGCTTCGCAC-C-ATTCTCTATCGTAAGAATGCCCTAATAAAGCAAAAAATTCAAA-T-TATAATCT-----GCGATTTCAGCCCTCAAAAATTCG--CTAAAAGCAAATCCCATGTCACCTGAACTGAA---AAGTGCATTGTCTGTCAAATATCTGCGAACGGATTCTTTGGATGT-----CTACCTATTTGACATAGAGGACAAATCAAGCATAATCC--AAGTTTA-AAATTTCATCATCTAGCGATGACACGTCTATGCTT--CTTTTCAC--CAGTCAAT-CAAAAAACTAAATATCATC-TCTGA--TATG-----CGCCACAAACGCCTCATTAATA-CAGTCTTGTTGCCCACGCACTGACTTCT--ATA-TACGCTTTTGTCTATCCAAGATCAGTCGG--ACA---AGTATTTTAGA--CAAAAATCCCC-ACTTCTATCCATTGAGTGTGATCTTCTATAACTGGATCATTTCCA-TGGAATTATAGT--TTT--CAT--TCGGCTTTTGTTTCGTGTTG-CCGTATTTCTT-TAAACTAAAAAAGCACAAGGCTTTTTCAAAAT-GG-ATTCTTCCTTCTGAA-GCAAGTAA---------ATC-----ATAGTTACAATAAAATATTTAAAACGCA-ATAA-CATCATCACGTGCAA--GTG----CTC-GATAT---CGATGACTCTTTA--------TAGCGTTATGTAAGAGACAAGAAAGTTTT-CTGTAC-CCGTCAACCCGACTTGACATAACTGTTGCATTTTGAGGATCACAAATCATATAGAA-CCGTTCTGGAGTACGCCGCACTTACTAGGTGTCAGCTGCC-TGATAGATGACCCTGTTTC-GCAAATATTTGTTTCTCACTAGTCATGTTTCGAC-----TGAAACTTAACTTCTCTTAGGCGTTAAGATAAAATTTAGTTACGCGTTCAATAAAGTACT-CAAACT----TAACCGA-ACATTATTATTTCATCATGTAATA-CAGC-TATACTCTACACGTCTGACACAGTCATTTACA-TACCCGGTTCC-GACTCATATCAACATAA--------ATCTCGTATGTAAGTC------------ATATGGTATACTAGTGTAGCACTTTGTTCACA--TTAGACAAATAAAATGGTTATATAATGT-AAACAATAATT--ACAATTGAGTAATC-TAAAGATGTTAT------TATCTCTTAT---TGTCA-ATTTCGCACAAAACGTTTGCGAGAAAAAGTGTAG--TTTAATGG-AGAATTAA-------------AGCGCGCACATGACTAATCTA--TTTTTTAGACTACTTGATATCATTGCAT---GT-GAGTATTATATAAGGGAACCGTAAAC-GTC-GATAAACTGCAATCGCTC-CAATTTATCGTGGTCTGAT-TTTGTACAATAATACACTACAAAGAGTA-TTATGTAGTAGCAGAAACTAGCTAAAACGTCCGTTATTCTCAT-AAG-C--TA--ACATGTTT----AATT-TAAAACATTTTTGTATAAG-AAA-CTG--GCAAAA-ATAGTGCCA-AAATATCAT-AA-----A--TATTTCAATATATTAGGACTTGTAAATA-TATACCTACAATGGCCGT-AATTTTG---C--TTTAAAATG-GTTCTGGTAGTAT-ATGCAGGAAACAA-AGTTAAACCC--AAAAAACTGCATT-CAAAGA-GG---TA------A-AGACA-AAAAAAAAAGTGATGCAACGCTTTTGATATAT--CC---GAATAAAGA--AAAAA-TGT---C-CACCC---T-ATGA-CTTTGATC-CCTCAGAT---TTGCAGCCTTTA---T-CG-ACTTTAGAA--G-TG--ACATCCGG-CCTA-GCATGTCGCAC-TGGAAT-TCATAGAAGAGTTTGAAGTCGGTCTTGAGATTTTGC-ATGTAAACCAAATATCTGTCCATTCAAA-AACC--AT--TTC---TAGGCCAA--TTTCATAAT-
gi|6 : cCGTTACT--AG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTTGG--TACTTCAGTTTA-TTT-TCAGTG-GT-CTCTTCATCATCATCAA-GTAGACCAAACA-ACG-TAAGT------GTTTCATTTGAA-ACTT---GCAACCGCC-TA--GCCT-AC-GT--GATG-C--AAA---AC---ATA-TTTCTTGCT---TGGTC-ATT-TCGTG---CAATAC----CAATAATCCCC-C------GCAGTCT--TGCA----AATC-TTATTGATCAATTCAGTG--GC----TTGG-T-------CT--GCA-GGTAC-----TTCGTTGA--AC-CTAT-----GT-TCACTTCTTTT-CACAACAAACATTTCCAC--CAT-----AA---ATTCGTT-GA-A-GAAGTTGG--G---C-GC-AG--TCTT---T---GGTAGTGCT-TT-----CATATCCGC--TAGATAT--ACTG----GTCCC-CC--ATCTCGTGTAGTTT-GTGT-GA-TCA-----TA---CACA-GT-GCTGTTAAC-CA-A-GGCAA-CATCGCA---GC--AAAGATATCC-A-TGTCAAGCAGCCAA-----TT------------------GCTCTGATGAAGC----TTAA---CAAGAGCT---CGACC-ATTCTC-AT-GTACGAATGCC----------AAA-AAGCAAAATT-CTTAAT-CTGCTG--CATTTCAGAC-TCGAA--TTCG-CTCAG---CAAATCCT-T-gccga
gi|7 : ctgctcCGTTTATCTAG-ATATTTCCTGCATTTGTTTAATACGTTGGTTGGTT-GGGTACTTCAGTTTAATTT-TCAGTG-GTGCTCTTCATCATCATCAA-GTAGACCAAACAAGCG-TAAGTGTCCTCGTTCGATTTG-AGACTTGTGGCGACGGCC-TAGGGCCCAACGGTGAGATG-CGAAGA---ACAAGATG-ATTCT--TG--CTTGTCGATTGTCTTGGGTTAA-ATGAAACAATA--TCCCGCCGGCGGGCAGTCCTGT-TGGGCAAATCGTTATTTGA---TCCATTGCAGATTGCTTGG-T-------CTGGGCA-GGGACCTTAGTTCGTTGGA-AC-CTAT-----GTAC-ATTTCTTTTGCACAAACAA-ACTTTC-C--CACGCATAAA---TTTCGTT----AAGAAGTTAAAGG---CGGC-TG--TC-T---TTGGGGTAGTCCTGTTGCATTCATATCCGC--TAGATATTAGCTG----GT--CGCC--ATCTCGCGTAG-TT-GTGTGTATTCA--T--TATCTTACAGGTGGCTGTTAACGCA-AGGGCAA-CATCGCAGGGGC-AAAAGATTTCC-A-C-TGAAGCgtac
gi|10 : ccg-C-TA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCT--TTTCCTGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTCC-C------GCAGTCT--T--GCC--AAT---TAT-------T---GTG---CAT--TCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAA-ACACTATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCC-CACCAT-----AGAGGTATCGTTTGATAAGAAATTAA--GGTAC-GCCTGGTTC-TAATT---GGTAGTGCT-TTC----CATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAAAGA--TA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GC--AAAGATTTCCAA-CTT-AAGC
gi|8 : ---TTTTGTT-GA-AG-AAGTTGG--G---C-GC-AG--TC-T---TT--GGTAGTGCT-TT-----CATATC--CGCTAGATAT--ACTA----GT--C-CCCCATCTCGCGTAG-TTTGTGT-GA-TCA-----TG---CACA-GT-GCTGTTAAC-CA-A-GGC-AACATCGCA---GCAAA--GATTTCC-A-TGTGAAGCAGCTAA--------------------CTG---CTCTTTTGAAGC----TTAA---CAAGAGCT---CGA-CCATTCTC-AT-GTATGAATGCC----------AAA-AAGCAAAA-TTCTTAATC-TGCTG--CATTTCAGAC-TCAAA--TTCGCCCCG----CAAATCCC-T-GTACC----CTGACTTTGAAATC-TTGTCTGCCAA-TA-CT-GCATTTGATTCTT-GGATG----TTCTCCCTATTTGAC--AGAGG-CAAA--TGC--AAGTTCC-ATGTTCA-AAATTTCATCATCTAGCGATGGCACGTCTAT-CTT--CTTTTCAC-GCAGTCAA-TCAAAGAA--ATATATC--CATTTGA--T--G-----CGCCACAA-CGCCTCAT--ACATCAG-TTTGTG-CCCACGCACT--GCTTTTA
gi|4 : TTTTTGCG-----CA--TCAAAGGA-TATATATT--C-TTTGAATT--GACTGCCGTAAAAA
gi|2 : tcgttactctagattttcctcatttttaatacgtgttggttgtattcagtttattttcagtgcgtctcttcatccacatcaagtaggccaaacatacgctaagtggtttcatttgaagacttgcgaccgctagcccacgtgatgcaaaacatatctctctctggtcatttcttgtaaaccaatacccccgcagtctttgaatcttattccagtggcttttggctctgcagggacttcgttgaacacctatgttacttcttttcacaacaaaacttcctcataatttcgttgaaggaagttaagcgctgtcttggtagtgctttacatatcctagatatactggtcccatctcgcgtagttgtgttatcagtacacagtgctgttaaccaaggcacatcgcagcaaaaagatttccacttgaagcagccaatcaccagttctctgtggctcttatgaagcttaacaaagctcgacattctcatgtaagaatgccaaataatcaaaatcttaatcctgctagccatttcagactcaaattcgtccacaaatcccttcacctctgactttgaattcttgtctgccaatactggcaatggattcttggatgttctttcttcctatttgacatagaggcaaaactgccaaaattccaaagttcataaatttcatcatctagcgatggcacgtctatcttactTTTTTGCG-----CA--TCAAAGGA-TATATATT--C-TTTGAATT--GACTGCCGTAAAAAccgccttatatatcagcttgtcccacgcactctttttaatggtacgcttttctatccaaatccagcgagaacatgcagtattaggaccaaaaatcccccacttctatccatactgtcttctaaacctggatctccaatagcatagttttatcgtgcgttttgtctgtgttggccgtatttcttagaaactgaacaaggctttaaggactgttccttctgaaagcaattaacatcatcttaaacgataatcatcatccaactgtggaccctccgatatgtccgatgactttttaagcgttggtagcattatgcaagagagtttcgcttactcctccaaccctttgaaaaaaccttcattttggccaatccagagtccgcttgaccttcgctttacagtgtcgctgccctgaagatgacccttcttctgcaaatagttgttttacagatgttttgcccttcgtgaaaccttttttctctagtgttaaggttagtagccttttaaaatactacccactaaaataaccgacacatattatacatgtaacaacagcatatatgctactgtctgacacagtcattacaatacccggtccccgactaatctaaatatggacactttgttcacactttagacaaataaaatgtttaatgttaaacaataattcaacaattgactacgtaaagatgttattatctcttatccatgtcacacttccacaaaagttgcgagaaaagtgtaagttttaattgaattaagcggcgattttcaagcgcgcaaatgacgagctacattttttaacgacacattgatatagagtataagggacggtaacctgtccgataaataccaatcgcgcgcaatttagctgctgatgtttgtacaatatacactaaaagagtaattattaagtagcagaacatgctaaaactcgttatttcatagctaactcaatttataactttataagaagctggcaaaacatagtgccacaaatatcataatatatatataaattttgtaaataaataccaaaatggctgtatttgccttttaaaatggtgctgaagtatacagaaaacaagagttaaacacaaaaactgcattcaaaaaggtaaagcacaaaaaaaaagtatcaacgcttgatttatagaaataagaaaattcgcaccctaatgacctttgacccaattgctgccattaatttcgaacattagaagggtggatccgcctagcatgtttcacatgggacatcatagaaagatgtgggtggtcttagtttttgcattaacaaatttttgccatcaaaccattttctataggccacttttcagaatcgagg
gi|9 : tcgttactctagattttcctcatttttaatacgtgttggttgtattcagtttattttcagtgcgtctcttcatccacatcaagtaggccaaacatacgctaagtggtttcatttgaagacttgcgaccgctagcccacgtgatgcaaaacatatctctctctggtcatttcttgtaaaccaatacccccgcagtctttgaatcttattccagtggcttttggctctgcagggacttcgttgaacacctatgttacttcttttcacaacaaaacttcctcataatttcgttgaaggaagttaagcgctgtcttggtagtgctttacatatcctagatatactggtcccatctcgcgtagttgtgttatcagtacacagtgctgttaaccaaggcacatcgcagcaaaaagatttccacttgaagcagccaatcaccagttctctgtggctcttatgaagcttaacaaagctcgacattctcatgtaagaatgccaaataatcaaaatcttaatcctgctagccatttcagactcaaattcgtccacaaatcccttcacctctgactttgaattcttgtctgccaatactggcaatggattcttggatgttctttcttcctatttgacatagaggcaaaactgccaaaattccaaagttcataaatttcatcatctagcgatggcacgtctatcttactTCAG-CTTGTG-CCCACGCACT--GCTTTTA----TAGGCTTT-----A-CCAAATCC-G-CG-GAACA----GTATT--AGGACCGAAAATTCCC-GCTTCTATCCAT--A-TGT---CTTCTAAACCTGGATC---TCCA-TAG---CATCGTCGTTT-TCATAGGTG--TTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTGAA------CAAGGCTTTTCA--AA--TG-GTATTTCCTTCTG-AAGCAATTAAATCATGTCTATCAGATAAT---------------CTTAAA---CGCATTA-CATCTTC-----CAACTGT-GACCGCTCGATTTGTCCGATGACTTTTCAAGCTTTTGTA-CATTATGCAAGATA-------GTTT-GCT-TAC-CCT-CAACCC--TCTGACAGAACA-TG-CATTTTGA------CCAATCAA-CAGGGT-CGCT-TGACCTGCGCT----TTAC--AGTGTC-GCTG-CCTGT-AGATGACCCccgccttatatatcagcttgtcccacgcactctttttaatggtacgcttttctatccaaatccagcgagaacatgcagtattaggaccaaaaatcccccacttctatccatactgtcttctaaacctggatctccaatagcatagttttatcgtgcgttttgtctgtgttggccgtatttcttagaaactgaacaaggctttaaggactgttccttctgaaagcaattaacatcatcttaaacgataatcatcatccaactgtggaccctccgatatgtccgatgactttttaagcgttggtagcattatgcaagagagtttcgcttactcctccaaccctttgaaaaaaccttcattttggccaatccagagtccgcttgaccttcgctttacagtgtcgctgccctgaagatgacccttcttctgcaaatagttgttttacagatgttttgcccttcgtgaaaccttttttctctagtgttaaggttagtagccttttaaaatactacccactaaaataaccgacacatattatacatgtaacaacagcatatatgctactgtctgacacagtcattacaatacccggtccccgactaatctaaatatggacactttgttcacactttagacaaataaaatgtttaatgttaaacaataattcaacaattgactacgtaaagatgttattatctcttatccatgtcacacttccacaaaagttgcgagaaaagtgtaagttttaattgaattaagcggcgattttcaagcgcgcaaatgacgagctacattttttaacgacacattgatatagagtataagggacggtaacctgtccgataaataccaatcgcgcgcaatttagctgctgatgtttgtacaatatacactaaaagagtaattattaagtagcagaacatgctaaaactcgttatttcatagctaactcaatttataactttataagaagctggcaaaacatagtgccacaaatatcataatatatatataaattttgtaaataaataccaaaatggctgtatttgccttttaaaatggtgctgaagtatacagaaaacaagagttaaacacaaaaactgcattcaaaaaggtaaagcacaaaaaaaaagtatcaacgcttgatttatagaaataagaaaattcgcaccctaatgacctttgacccaattgctgccattaatttcgaacattagaagggtggatccgcctagcatgtttcacatgggacatcatagaaagatgtgggtggtcttagtttttgcattaacaaatttttgccatcaaaccattttctataggccacttttcagaatcgagg
gi|13 : TT--CTATCCAAATCC-G-CG-GAACA----GTATT--AGAACCGAAAATCCCC-GCTTCTCTCTAT--A-TGT---CTTATAAACTTGGATC---TCCA-CAG---CATCGT-------CGT-------TTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTTAA------CAAGGCTTTTC---AAATGGTACT-TGCCTTCTG-AAGCAATTAA---------ATC-----AT---------------
gi|16 : TAAA---CGCATAA-CATCATC-----CACCTGTG-ACCGTCCCATATGTCCGATGACCTTTCAAGCGTTgtc
gi|14 : TACCCGGTCCC-GACT------------ATCAAATAAATCT-------AGTAGTAAGCATATGTTATATAGTGT---------ACGCTTTGTTCACACTT-AGACAAATAAAATG-TTA--AAATG-TAAACAATAATT-ATCAATTGAGTA--CCTAAAGATGTTATTACATGTATCTCTTATCCATGTCtg
gi|5 : AATTGAGTA--CCTAAAGATGTTAT------TATCTCTTGTCCATGTCACATTTC-CACAAAACGTT-GCGAGAAAG-GTGTAG--TTTAACTGAA--ATTAAGC-GTGATTTTCAAGCGCGCAAATGACGAG-CTA---TTTTTA--------GACA-CATTG-GTATCATGCAGTAT-----AAGGGA-C-GTAA-CTGT-TAATAAATGCTAATCGCGCGAAAGTTAGCGTA--CTGAT-TTTGTACAATA-TGCACTA-GAAGAGT-ATTATGTAGTAGCAGAACA--GCTAAAACG-TCGTTATT-TCATAA-G-C--TA--ACTG--TT----AATT-TATAACAT--TT-TATAAGAAAA-CTG--GCAAAA-ATAGTGCCA-AAATATCATAAA----TAATCATAT--AT-AATT-----TTGCAAATATAATACC--AAATGGCTGTAA--TTTG----CTTTTAAAATG-GTGCTGGTAGTAT-A--CAG-AAAC-AGAGTTAAACACAAAAAA-ACTGCATT-CTAAAA-GG---TA------AGAA-CA-AAAAAAAAAAT-ATGCAACGC--TTGATATATC-AGAATAAAGA---A--AAAAA-T------GCACCT-----ATGACCTTTGACCTC-----AAT--TTGCAGCC-TT-ATTT-CG-ACCTTAGAAGGG-TG--ACATCCGG-CCTA-GCATGT----CAT-GGACACCATAG-AAGATGTT-GTT-GGTCTT-AG-TTTTGC-AT-TAA--CAAA-TTTTG-CCATC---ATAACC--AT--TTTC--TAGGCCACTTTTTCAGAATCCGAGG
gi|15 : CAGAACA--GCTGAAACG-TCGTTATG-TCAT-AGG-CTATA--ACTG--TT----AATT-TATAACAT--TT-TATAAG-AAta
gi|11 : CTGAAACG-TCGTTATT--CAT-A-GGC--TATAAC----CCTGTTAATTCTATAACATT-TT-TATAAG-AAAACTGAGGCAAAA-ATAGTGCCACA--TATCAT-AAATAATA--TATAT--ATAA-TG-----TTGCAAATT-AATACC-AAAATGGCTGT-A--ATTGTTTTTTTTTTAAATGTGTG-GGT-AGTATAA--CAGAAACAAAGAG-TAAACACA-AAAA-ACTGCATTCCAAAAACGGGTTTAGTTTTTA-AG--AAAAAAAAAAAGT-ATGCAACGC--CTGATATATGCAG----AATA---AAGGAAAAGT-TAACTGCATCCCTTTAACAACCTagcagcag
gi|12 : aGACCTT------C-----AAATTTTGCAGCCTTTGATTTTCGACCTGTAGAAGGGGTGATG-ATCC-GGTCTACGCATGTT-CACCTGG-ACA-CATAGAA-GATGTT-G-T-GGTCTT-CGTTTTGGCTAT-TAA--CAAATTTGTG-CCATCA--A-AACCCGATTGTTTCC-TAGGACACTTTTTCAGAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2 1 1 11111 111 1 1 1 222 111 1 11 111 1111 111 11111 333333 3333333 111111 3333333 1 11111 1 1 22222 11 11111 1111111111111 1 111 11 11111111111 111111 11 2222 22222 11 1 222222222222222222 1111 1111 111 2222222222 1 111 1111 1 1 1 11 11 11 22 222 11 1111 111 111 1 111 1111 111111 22222222 4444444444444444444444444444444444 1 1 11111 2222222 1 11 222222 22 1111 11 11 1 11 11 222222 111 11 1 11111 11 1 00000000000000000000000000000000000000000000000000000000000000000000 2222 1 111111 2 11 11 22222222 111 22222 1 2 11 1 1 11 1 1 1 11 333333333333 11 111 1 1111 1111111 111 1 11 22 111 111111 1 11111111 111111 11111 11111 2222222222 22 1 111 11 2
lowQualScore : 2 2 6 6 6 99 99 6 99 3 6 6 5 6 44 6 1 9 66666 1 111 1 5 77 7 5 77 1 77 000 000 1 55 5 5 5 000 5 2222 222 5 44444 333333 1 66 0000000 6 666666 99 8 7777777 77 1 44444 0 7 1 88888 5 5 4 5 00 88888 9999999999999 5 5 0 2 66 777 5 5 5 33 88888888888 5 222222 33 66 66 1111 66 5 66 5 5 2 5 5 33333 888 77 5 5 22 5 0 5 2 888 9 3 5 5 3 5 666666666666666666 444 4444 5555 111 6 6 6 6 9999999999 1 6 6 1 88 6 99 6 888 6 6 4444 0 8 8 8 8 7777 0 8 6 5 0 8 0 0 11 88 11 8 11 0 0 5 11 6 11 99 0 5 99 7 6 9 000 99 0 55 1111 111 111 5 111 99 1111 99 2 6 1 999999 77777777 6 6 7 7 5555555555555555555555555555555555 6 5 6 5 66666 6 6666666 3 8 0 3 11 1 8 8 333333 88 8 8 1 7777 11 8 8 3 33 0 33 2 2 33 2 888888 111 33 3 3 2 0 88888 3 3 2 22 0 3 33333333333333333333333333333333333333333333333333333333333333333333 0 8 2222 11 0 2 6 1 999999 8 0 8 8 00 11 8 0 5 8 55 33333333 8 8 444 3 00000 8 5 5 0 0 0 11 0 8 8 0 22 44 1 5 5 1 1 55 000000000000 5 33 000 5 5 5 77 5 6 6 4444 4444444 6 6 1 6 6 6 99 22 111 6 5 55 1 22 6 6 111 999999 6 6 99 6 5 99 4 88888888 111111 6 77777 44444 6 1111111111 4 1 6 7 1 6 44 5 6 88 3 1 1 1 6 2 6 6 3 6 6 99 6 888 6 99 99 22 3 8
lowQualScore : . . . . . .. .. . .. . . . . . .. . . . ..... . ... . . .. . . .. . .. ... ... . .. . . . ... . .... ... . ..... ...... . .. ....... . ...... .. . ....... .. . ..... . . . ..... . . . . .. ..... ............. . . . . .. ... . . . .. ........... . ...... .. .. .. .... .. . .. . . . . . ..... ... .. . . .. . . . . ... . . . . . . .................. ... .... .... ... . . . . .......... . . . . .. . .. . ... . . .... . . . . . .... . . . . . . . . .. .. .. . .. . . . .. . .. .. . . .. . . . ... .. . .. .... ... ... . ... .. .... .. . . . ...... ........ . . . . .................................. . . . . ..... . ....... . . . . .. . . . ...... .. . . . .... .. . . . .. . .. . . .. . ...... ... .. . . . . ..... . . . .. . . .................................................................... . . .... .. . . . . ...... . . . . .. .. . . . . .. ........ . . ... . ..... . . . . . . .. . . . . .. .. . . . . . .. ............ . .. ... . . . .. . . . .... ....... . . . . . . .. .. ... . . .. . .. . . ... ...... . . .. . . .. . ........ ...... . ..... ..... . .......... . . . . . . .. . . .. . . . . . . . . . . . .. . ... . .. .. .. . .
lowQualScore : 5 5 7 7 7 22 22 7 22 3 7 7 0 7 00 7 7 3 77777 7 777 4 7 99 1 7 99 4 99 000 000 4 77 7 7 7 000 7 1111 444 7 33333 666666 7 44 7777777 6 444444 00 9 1111111 99 4 33333 1 1 4 66666 7 7 3 7 77 33333 3333333333333 0 0 0 2 99 555 0 0 0 88 22222222222 0 444444 88 99 99 2222 99 0 99 0 0 0 0 0 44444 888 55 0 0 00 0 0 0 5 888 4 2 0 0 1 6 222222222222222222 000 2222 2222 777 7 7 7 7 2222222222 7 7 7 0 88 7 22 7 333 7 7 8888 8 0 0 0 0 0000 8 0 0 6 6 0 6 0 66 88 00 0 00 6 6 0 00 7 77 22 8 0 22 3 7 8 555 22 7 77 0000 777 777 5 777 22 5555 22 5 7 0 222222 55555555 7 7 5 3 8888888888888888888888888888888888 7 0 7 5 77777 7 0000000 2 0 6 2 00 0 0 0 000000 44 0 0 0 0000 00 0 0 2 88 0 88 0 5 88 0 888888 000 88 2 2 5 0 55555 2 2 0 00 0 2 22222222222222222222222222222222222222222222222222222222222222222222 8 0 4444 66 0 5 7 0 222222 0 0 0 0 66 00 0 8 0 0 88 88888888 0 0 000 8 00000 0 0 0 8 0 0 00 0 0 0 6 00 00 4 7 7 4 4 77 000000000000 7 33 000 7 7 7 99 0 7 7 2222 3333333 7 7 7 7 7 7 22 00 777 7 5 88 7 22 7 7 777 222222 7 7 22 7 0 22 0 33333333 888888 7 55555 00000 7 3333333333 0 0 7 3 0 7 33 0 7 88 2 0 7 7 7 5 7 7 5 7 7 22 7 333 7 22 22 88 7 0
consensus : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCNNCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTTG-----CGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAACAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--C--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--AGAGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT-GCCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCGCTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTTT-CAA---G-G-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC-ACAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGT-TA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--TATAATGTTAAACAATAATTCAACAATTGANT-ACGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAACATTT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGGTAGTATA--CAGAAAACAAGAGTTAAACAC-AAAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATNTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCNGCCNTTAATTT-CGAACNTTAGAAGGG-TGGC-ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
Reference ( family-12376 ) : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TACTTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCANCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTT------CGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-AC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--C--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GCGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CG-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--AGAGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTGGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACCTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTCAT--ATATCAG-CTTGT-GCCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCGCTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTTT-CAA---G-G-ACTNTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGANAAAACC-TT-CATTTTGG------CCAATC-ACAGAGT-CCGCT-TGACCTNCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTCGCCCTTCGTGAAACCTTTTTTCTCT--AGCGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATACGCTAC-CGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGTGTA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--TATAATGTTAAACAATAATTCAACAATTGAGT-ACNTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAGGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATNNAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAACATTT---T-ATAAG-AAA-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGGTAGTATA--CAGAAAACAAGAGTTAAACAC-AAAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATATAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCAGCCNTTAATTT-CGAACNTTAGAAGGG-TGGC-ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCACTTTTTCAGAAT-CGAGG
gi|1 : CGTTA---TAGTAT-TTTC-T-CATTT--CTAATAC-T--GT--GTT-G--TA-TTCAGTTTT-TTTGTCAGTG-GT-CT--TCATCACCATCAAAGTTAGACAAACA-ACGT--AGTG-------TTCATTTCGAGCTCT---GCGACCG-CCTA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCTTTTCC-TGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTC-CC-----GCAGTCTTG-----CCAAT---TAT-------T---GTG-------CATTCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAA-ACACTATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCC--CACCAT-----A---GAGGTATCG-TTTGATAAGAAATTAA--GGTAC-G-CCTGGTTC---TAATT---GGTAGTGCT-T----TCCATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAA--AGATA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GCAAA--GATTTCC-AACTT-AAGCAGCCAACAAATTCACTGTCAGTTTCTCTGTG-CTCTCATGAAGCAAGTTTAAAATTAGAGCTTCGCAC-C-ATTCTCTATCGTAAGAATGCCCTAATAAAGCAAAAAATTCAAA-T-TATAATCT-----GCGATTTCAGCCCTCAAAAATTCG-CTAAAAGCAAATCCCATGTCACCTGAACTGAA---AAGTGCATTGTCTGTCAAATATCTGCGAACGGATTCTTTGGATGT-----CTACCTATTTGACATAGAGGACAAATCAAGCATAATCC--AAGTTTA-AAATTTCATCATCTAGCGATGACACGTCTATGCTT--CTTTTCAC--CAGTCAAT-CAAAAAACTAAATATCATC-TCTGATATGCGCCACAAACGCCTCATTAATA-CAGTCTTGTTGCCCACGCACTGACTTCT--ATA-TACGCTTTTGTCTATCCAAGATCAGTCGG--ACA---AGTATTTTAGA--CAAAAATCCCC-ACTTCTATCCATTGAGTGTGATCTTCTATAACTGGATCATTTCCA-TGGAATTATAGT--TTTCATTCG---GC-TTTTGTTTCGTGTTG-CCGTATTTCTTT-AAACTAAAAAAGCACAAGGCTTTTTCAAAATG-G-ATTCTTCCTTCTGAA-GCAAGTAA---------ATC-----ATAGTTACAATAAAATATTTAAAACGCAATAA-CATCATCACGTGCAA--GTG----CTC-GATAT---CGATGACTCTTTA--------TAGCGTTATGTAAGAGACAAGAAAGTTTT-CTGTAC-CCGTCAACCCGACTTGACATAACTGTTGCATTTTGAGGATCACAAATC-ATATAGAACCGTTCTGGAGTACGCCGCACTTACTAGGTGTCAGCTGCC-TGATAGATGACCCTGTTTC-GCAAATATTTGTTTCTCACTAGTCATGTTTCGAC-----TGAAACTTAACTTCTCTTAGGCGTTAAGATAAAATTTAGTTACGCGTTCAATAAAGTACT-CAAACT----TAACCGA-ACATTATTATTTCATCATGTAATA-CAGC-TATACTCTACACGTCTGACACAGTCATTTAC-ATACCCGGT-TCCGACTCATATCAACATAA--------ATCTCGTATGTAAGTC------------ATATGGTATACTAGTGTAGCACTTTGTTCACA--TTAGACAAATAAAATGGTTATATAATG-TAAACAATAATT--ACAATTGAGTAATCTAAAGATGTTAT------TATCTCTTAT---TGTCA-ATTTCGCACAAAACGTTTGCGAGAAAAAGTGTAG--TTTAATGGAG-AATTA-------------AAGCGCGCACATGACTAATCT--ATTTTTTAGACTACTTGATATCATTGCAT---GT-GAGTATTATATAAGGGAACCGTAAAC-GT-CGATAAACTGCAATCGCTC-CAATTTATCGTGGTCTGAT-TTTGTACAATAATACACTACAAAGAGT-ATTATGTAGTAGCAGAAACTAGCTAAAACGTCCGTTATTCTCATAAG-CTA--ACATGTT--T----AATT-TAAAACATTTTTGT-ATAAG-AAA-CTG--GCAAAA-ATAGTGCCA-AAATATCATAAA----TATTTCAA--TATATTA-GGACTTGTAAATA-TATACCTACAATGGCCGT-AATTTTGC--TTTA---AAATG-GTTCTGGTAGTATATGCAGGAAACAA-AGTTAAACCC-AAAAAACTGCATT-CAAAGA-GG---TA------A-AG-ACAAAAAAAAAAGTGATGCAACGCTTTTGATATAT--CC---GAATAAAGA--AAAAA-TGT---C-CACCC---T-ATGA-CTTTGATC-CCTCAGAT---TTGCAGCCTTTA---T-CG-ACTTTAGAA--G-TGAC-ATCCGGCCTA-GCATGTCGCAC-TGGAAT-TCATAGAAGAGTTTGAAGTCGGTCTTGAGATTTTGC-ATGTAAACCAAATATCTGTCCATTCAAA-AACC--AT--TTC---TAGGCCAA--TTTCATAAT-
gi|10 : c-C-TA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCTTTTCC-TGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTC-CC-----GCAGTCTTG-----CCAA---TTAT-------T---GT-------GCATTCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAA-ACACTATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCCCAC--CAT-----AGAGG---TATCGTTT-GATAAGAAATTAA--GGTAC-GCC-TGGTTCTAAT---T---GGTAGTGCT-T----TCCATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAAAGA--TA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GC--AAAGATTTCCAA-CTT-AAGCgccga
gi|11 : CTGAAACGT-CGTTATT--CAT-AGGCTATAAC----C--CTGTTAATTCTATAACATTT---TTATAAG-AAAACTGAGGCAAAA-ATAGTGCCACA--TATCAT-AAATAATAT----A--TATA-TA-A-TGTTGCAAATT-AATACC-AAAATGGCTGT-A--ATTGTTTTTTTTTTAAATGTGTG--GGTAGTATAA-CAGAAACAAAGAGT-AAACAC-AAAAAACTGCATTCCAAAAACGGGTTTAGTTTTTA-AG-AA-AAAAAAAAAGT-ATGCAACGC--CTGATATATGCAG----AATA---AAGGAAAAGT-TAACTGCATCCCTTTAACAACCT
gi|12 : aGACCTT------C-----AAATTTTGCAGCCTTTGATTTTCGACCTGTAGAAGGGGTGATGATCCGGTCTACGCATGTT-CACCTGG-ACA-CATAGAA-GATGTT-G-T-GGTCTT-CGTTTTGGCTAT-TAA--CAAATTTGTG-CCATCA--A-AACCCGATTGTTTCC-TAGGACACTTTTTCAGAA
gi|13 : TT--CTATCCAAATCC-G-CG-GAACA----GTATT--AGAACCGAAAATCCCC-GCTTCTCTCTAT--A-TGT---CTTATAAACTTGGATC---TCCA-CAG---CATCGT---------CGT-----TTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTTAA------CAAGGCTTTT-CAAAT-G-GTACT-TGCCTTCTG-AAGCAATTAA---------ATC-----AT---------------gtcccgaaggt
gi|14 : TACCCGGTCCC-GACT------------ATCAAATAAATC-------TAGTAGTAAGCATATGTTATATAGTGTA---------CGCTTTGTTCACACTT-AGACAAATAAAAT-GT--TAAAATGT-AAACAATAATT-ATCAATTGAGT-ACCTAAAGATGTTATTACATGTATCTCTTATCCATGTCgtc
gi|15 : CAGAACA--GCTGAAACGT-CGTTATG-TCAT-AGGCTATAAC----TGTT----AATT-TATAACATTT---T-ATAAG-AAA-GCA--GCA
gi|16 : TAAA-CGCA-TAA-CATCATC-----CACCTGTG-ACCGTCCCATATGTCCGATGACCTTTCAAGCGTTg
gi|2 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAAT-A-CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAACAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--A-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT---AA---G-G-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--T-TAATGTTAAACAATAATTCAACAATTGACT-ACGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAAC--TT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGA-AGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TGG--ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGGtg
gi|3 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAAT-A-CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAACAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--A-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT---AA---G-G-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--T-TAATGTTAAACAATAATTCAACAATTGACT-ACGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAAC--TT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGA-AGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TGG--ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|4 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAAT-A-CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAACAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--A-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT---AA---G-G-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--T-TAATGTTAAACAATAATTCAACAATTGACT-ACGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAAC--TT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGA-AGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TGG--ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|5 : AATTGAGT-ACCTAAAGATGTTAT------TATCTCTTGTCCATGTCACATTTC-CACAAAACG-TTGCGAG-AAAGGTGTAG--TTTAACT--GAAATTAAGC-GTGATTTTCAAGCGCGCAAATGAC-GAGCTA---TTTTTA--------GACA-CATTG-GTATCATGCAG-----TATAAGGG-AC-GTAA-CTGT-TAATAAATGCTAATCGCGCGAAAGTTAGCGTA--CTGAT-TTTGTACAAT-ATGCACTA-GAAGAGT-ATTATGTAGTAGCAGAACA--GCTAAAACGT-CGTTATT-TCATAAG-CTA--ACTG--T--T----AATT-TATAACATTT---T-ATAAGAAAA-CTG--GCAAAA-ATAGTGCCA-AAATATCAT-AA-----AT----AATCATA-TATAATTTTGCAAATATAATACC--AAATGGCTGTAA--TTTG-CTTTTA---AAATG-GTGCTGGTAGTATA--CAG-AAAC-AGAGTTAAACACAAAAAAACTGCATT-CTAAAA-GG---TA------AGAACA--AAAAAAAAAAT-ATGCAACGC--TTGATATATC-AGAATAAAGA---A--AAAAA-T------GCACCT-----ATGACCTTTGACCTC-----AAT--TTGCAGCCTT--ATTT-CG-ACCTTAGAAGGG-TGAC-ATCCGGCCTA-GCATGT----CAT-GGACACCATAG-AAGATGTT-GTT-GGTCTT-AG-TTTTGC-AT-TAA--CAAA-TTTTG-CCATC---ATAACC--AT--TTTC--TAGGCCACTTTTTCAGAATCCGAGG
gi|6 : CGTTACT--AG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTTGG--TACTTCAGTTTA-TTT-TCAGTG-GT-CTCTTCATCATCATCAA-GTAGACCAAACA-ACG-TAAGT------GTTTCATTTGAA-ACTT---GCAACCGCC-TA--GCCT-AC-GT--GATG-C--AAA---AC---ATA-TTTCTTG--CTTGGTC-ATT-TCGTG---CAATAC----CAATAATCCC-CC-----GCAGTCTTG-----CAAATC-TTATTGATCAATTCAGTG------GCTT--GG-T-------CT--GCA-GGTAC-----TTCGTTG-A-AC-CTAT-----GT-TCACTTCTTTT-CACAACAAACATTTCCA-C--CAT-----A---A---ATTCG-TT-GA-A-GAAGTTGG--G---C-G-C-AG--TCT--T---T---GGTAGTGCT-T----T-CATATCCGC--TAGATAT--ACTG----GTCCC-CC--ATCTCGTGTAGTTT-GTGT-GA-TCA-----TA---CACA-GT-GCTGTTAAC-CA-A-GGCAA-CATCGCA---GC--AAAGATATCC-A-TGTCAAGCAGCCAA-----TT------------------GCTCTGATGAAGC----TTAACA--AGAGCT---CGACC-ATTCTC-AT-GTACGAATGCC----------AAA-AAGCAAAATT-CTTAAT-CTGCTG--CATTTCAGAC-TCGAA--TTCG-CTCAG--CAAATCCT-T-ta
gi|7 : ctgctcCGTTTATCTAG-ATATTTCCTGCATTTGTTTAATACGTTGGTTGGTT-GGGTACTTCAGTTTAATTT-TCAGTG-GTGCTCTTCATCATCATCAA-GTAGACCAAACAAGCG-TAAGTGTCCTCGTTCGATTTG-AGACTTGTGGCGACGGCC-TAGGGCCCAACGGTGAGATG-CGAAGA---ACAAGATG-ATTCTTG--C-TTGTCGATTGTCTTGGGTTAA-ATGAAACAATAT-CCCGCCGGCGGGCAGTCCTGTTGGGCAAATCGTTATTTGA---TCCATTGCAGATTGCTT--GG-T-------CTGGGCA-GGGACCTTAGTTCGTTGGA-AC-CTAT-----GTAC-ATTTCTTTTGCACAAACAA-ACTTTC--C--CACGCATAA---A---TTTCG-TT----AAGAAGTTAAAGG---CGG-C-TG--TC---T---TTGGGGTAGTCCTGTTGCATTCATATCCGC--TAGATATTAGCTG----GT--CGCC--ATCTCGCGTAG-TT-GTGTGTATTCA--T--TATCTTACAGGTGGCTGTTAACGCA-AGGGCAA-CATCGCAGGGGC-AAAAGATTTCC-A-C-TGAAGCgtac
gi|8 : ccg---TTTTG-TT-GA-AG-AAGTTGG--G---C-G-C-AG--TC---T---TT--GGTAGTGCT-T----T-CATATC--CGCTAGATAT--ACTA----GT--C-CCCCATCTCGCGTAG-TTTGTGT-GA-TCA-----TG---CACA-GT-GCTGTTAAC-CA-A-GGC-AACATCGCA---GCAAA--GATTTCC-A-TGTGAAGCAGCTAA--------------------CTG---CTCTTTTGAAGC----TTAACA--AGAGCT---CGA-CCATTCTC-AT-GTATGAATGCC----------AAA-AAGCAAAA-TTCTTAATC-TGCTG--CATTTCAGAC-TCAAA--TTCGCCCCG---CAAATCCC-T-GTACC----CTGACTTTGAAATC-TTGTCTGCCAA-TA-CT-GCATTTGATTCTT-GGATG----TTCTCCCTATTTGAC--AGAGG-CAAA--TGC--AAGTTCC-ATGTTCA-AAATTTCATCATCTAGCGATGGCACGTCTAT-CTT--CTTTTCAC-GCAGTCAA-TCAAAGAA--ATATATC--CATTTGAT--GCGCCACAA-CGCCTCAT--ACATCAG-TTTGT-GCCCACGCACT--GCTTTTA
gi|9 : TCAG-CTTGT-GCCCACGCACT--GCTTTTA----TAGGCTTT-----A-CCAAATCC-G-CG-GAACA----GTATT--AGGACCGAAAATTCCC-GCTTCTATCCAT--A-TGT---CTTCTAAACCTGGATC---TCCA-TAG---CATCGTCGTTT--T-CATAGGTGTTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTGAA------CAAGGCTTTT-CAA---ATG-GTATTTCCTTCTG-AAGCAATTAAATCATGTCTATCAGATAAT---------------CTTAAA-CGCA-TTA-CATCTTC-----CAACTGT-GACCGCTCGATTTGTCCGATGACTTTTCAAGCTTTTGTA-CATTATGCAAGATA-------GTTT-GCT-TAC-CCT-CAACCC--TCTGACAGAACA-TG-CATTTTGA------CCAATCAACAGGGT--CGCT-TGACCTGCGCT----TTAC--AGTGTC-GCTG-CCTGT-AGATGACCC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11111 111 1 1 1 222 111 1 11 111 1111 22 11111 222222 3333333 111111 3333333 1 11111 11 22222 11 11111 1111111111111 1 111 11 11111111111 111111 11 2222 22222 1 1 222222222222222222 1111 1111 111 2222222222 1 111 1111 1 1 1 11 11 11 22 222 11 1111 111 111 1 111 1111 111111 33333333 1 4444444444444444444444444444444444 1 1 11111 2222222 1 11 222222 22 1111 11 11 1 11 11 222222 111 11 1 11111 1 1 11111111111111111111111111111111111111111111111111111111111111111111 2222 1 111111 2 11 11 22222222 111 22222 1 2 11 1 1 11 1 1 1 11 333333333333 11 111 1 1111 1111111 111 1 11 22 111 111111 1 11111111 111111 11111 11111 2222222222 22 1 111 11 1
lowQualScore : 2 2 6 6 6 99 99 6 99 3 6 6 5 6 22 6 1 9 66666 1 111 1 5 77 7 5 77 1 77 000 000 1 55 5 5 5 000 5 2222 11 5 44444 555555 1 66 0000000 6 666666 99 8 7777777 77 1 44444 33 5 88888 5 5 4 5 00 88888 9999999999999 5 5 0 2 66 777 5 5 5 33 88888888888 5 222222 33 66 66 1111 66 5 66 5 5 5 5 33333 888 77 5 5 0 5 0 5 2 888 9 3 5 5 3 5 666666666666666666 444 4444 5555 111 6 6 6 6 9999999999 1 6 6 1 6 6 99 6 888 6 6 4444 0 8 8 8 8 7777 0 8 6 5 0 8 0 0 11 88 11 8 11 0 0 5 11 6 11 99 0 5 99 7 6 9 000 99 0 55 1111 111 111 5 111 99 1111 99 2 6 1 999999 66666666 6 0 7 5555555555555555555555555555555555 6 5 6 5 66666 6 6666666 3 8 0 3 11 0 8 8 333333 88 8 8 1 7777 11 8 8 3 33 0 33 2 33 888888 111 33 3 3 2 0 88888 3 3 0 0 3 11111111111111111111111111111111111111111111111111111111111111111111 0 8 2222 11 0 1 99 6 999999 8 0 8 8 00 11 8 0 5 8 55 33333333 8 8 444 3 00000 8 5 5 0 0 0 11 0 8 8 0 22 44 1 5 5 1 1 55 000000000000 5 33 000 5 5 6 99 5 6 6 4444 4444444 6 6 1 6 6 6 99 22 111 6 5 55 1 22 6 6 111 999999 6 6 99 6 5 99 1 88888888 111111 6 77777 44444 6 1111111111 1 1 6 7 1 6 44 5 6 88 3 1 1 1 6 2 6 6 3 6 6 99 6 888 6 99 99 22 3 8
lowQualScore : . . . . . .. .. . .. . . . . . .. . . . ..... . ... . . .. . . .. . .. ... ... . .. . . . ... . .... .. . ..... ...... . .. ....... . ...... .. . ....... .. . ..... .. . ..... . . . . .. ..... ............. . . . . .. ... . . . .. ........... . ...... .. .. .. .... .. . .. . . . . ..... ... .. . . . . . . . ... . . . . . . .................. ... .... .... ... . . . . .......... . . . . . . .. . ... . . .... . . . . . .... . . . . . . . . .. .. .. . .. . . . .. . .. .. . . .. . . . ... .. . .. .... ... ... . ... .. .... .. . . . ...... ........ . . . .................................. . . . . ..... . ....... . . . . .. . . . ...... .. . . . .... .. . . . .. . .. . .. ...... ... .. . . . . ..... . . . . . .................................................................... . . .... .. . . .. . ...... . . . . .. .. . . . . .. ........ . . ... . ..... . . . . . . .. . . . . .. .. . . . . . .. ............ . .. ... . . . .. . . . .... ....... . . . . . . .. .. ... . . .. . .. . . ... ...... . . .. . . .. . ........ ...... . ..... ..... . .......... . . . . . . .. . . .. . . . . . . . . . . . .. . ... . .. .. .. . .
lowQualScore : 5 5 7 7 7 22 22 7 22 3 7 7 0 7 00 7 7 3 77777 7 777 4 7 99 1 7 99 4 99 000 000 4 77 7 7 7 000 7 1111 44 7 33333 777777 7 44 7777777 6 444444 00 9 1111111 99 4 33333 66 7 66666 7 7 3 7 77 33333 3333333333333 0 0 0 2 99 555 0 0 0 88 22222222222 0 444444 88 99 99 2222 99 0 99 0 0 0 0 44444 888 55 0 0 0 0 0 0 5 888 4 2 0 0 1 6 222222222222222222 000 2222 2222 777 7 7 7 7 2222222222 7 7 7 0 7 7 22 7 333 7 7 8888 8 0 0 0 0 0000 8 0 0 6 6 0 6 0 66 88 00 0 00 6 6 0 00 7 77 22 8 0 22 3 7 8 555 22 7 77 0000 777 777 5 777 22 5555 22 5 7 0 222222 77777777 7 8 3 8888888888888888888888888888888888 7 0 7 5 77777 7 0000000 2 0 6 2 00 6 0 0 000000 44 0 0 0 0000 00 0 0 2 88 0 88 5 88 888888 000 88 2 2 5 0 55555 2 2 0 0 2 00000000000000000000000000000000000000000000000000000000000000000000 8 0 4444 66 0 0 22 7 222222 0 0 0 0 66 00 0 8 0 0 88 88888888 0 0 000 8 00000 0 0 0 8 0 0 00 0 0 0 6 00 00 4 7 7 4 4 77 000000000000 7 33 000 7 7 7 22 0 7 7 2222 3333333 7 7 7 7 7 7 22 00 777 7 5 88 7 22 7 7 777 222222 7 7 22 7 0 22 0 33333333 888888 7 55555 00000 7 3333333333 0 0 7 3 0 7 33 0 7 88 2 0 7 7 7 5 7 7 5 7 7 22 7 333 7 22 22 88 3 0
consensus : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCNNCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTT-----GCGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--C--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--AGAGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT-GCCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCGCTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTTT-CAAA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC-ACAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGT-TA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--TATAATGTTAAACAATAATTCAACAATTGANTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAACATTT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGGTAGTATA--CAGAAAACAAGAGTTAAACAC-AAAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATNTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCNGCCNTTAATTT-CGAACNTTAGAAGGG-TGGC-ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
Reference ( family-12376 ) : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCNNCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTT-----GCGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--C--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--AGAGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT-GCCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCGCTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTTT-CAA---GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC-ACAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGT-TA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--TATAATGTTAAACAATAATTCAACAATTGANTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAACATTT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGGTAGTATA--CAGAAAACAAGAGTTAAACAC-AAAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATNTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCNGCCNTTAATTT-CGAACNTTAGAAGGG-TGGC-ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|1 : CGTTA---TAGTAT-TTTC-T-CATTT--CTAATAC-T--GT--GTT-G--TA-TTCAGTTTT-TTTGTCAGTG-GT-CT--TCATCACCATCAAAGTTAGACAAACA-ACGT--AGTG-------TTCATTTCGAGCTCT---GCGACCG-CCTA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCTTTTCC-TGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTC-CC-----GCAGTCTT-----GCCAAT---TAT-------T---GTG-------CATTCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAAACAC--TATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCC--CACCAT-----A---GAGGTATCG-TTTGATAAGAAATTAA--GGTAC-G-CCTGGTTC---TAATT---GGTAGTGCT-T----TCCATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAA--AGATA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GCAAA--GATTTCC-AACTT-AAGCAGCCAACAAATTCACTGTCAGTTTCTCTGTG-CTCTCATGAAGCAAGTTTAAAATTAGAGCTTCGCAC-C-ATTCTCTATCGTAAGAATGCCCTAATAAAGCAAAAAATTCAAA-T-TATAATCT-----GCGATTTCAGCCCTCAAAAATTCG-CTAAAAGCAAATCCCATGTCACCTGAACTGAA---AAGTGCATTGTCTGTCAAATATCTGCGAACGGATTCTTTGGATGT-----CTACCTATTTGACATAGAGGACAAATCAAGCATAATCC--AAGTTTA-AAATTTCATCATCTAGCGATGACACGTCTATGCTT--CTTTTCAC--CAGTCAAT-CAAAAAACTAAATATCATC-TCTGATATGCGCCACAAACGCCTCATTAATA-CAGTCTTGTTGCCCACGCACTGACTTCT--ATA-TACGCTTTTGTCTATCCAAGATCAGTCGG--ACA---AGTATTTTAGA--CAAAAATCCCC-ACTTCTATCCATTGAGTGTGATCTTCTATAACTGGATCATTTCCA-TGGAATTATAGT--TTTCATTCG---GC-TTTTGTTTCGTGTTG-CCGTATTTCTTT-AAACTAAAAAAGCACAAGGCTTTTTCAAAATGG-ATTCTTCCTTCTGAA-GCAAGTAA---------ATC-----ATAGTTACAATAAAATATTTAAAACGCAATAA-CATCATCACGTGCAA--GTG----CTC-GATAT---CGATGACTCTTTA--------TAGCGTTATGTAAGAGACAAGAAAGTTTT-CTGTAC-CCGTCAACCCGACTTGACATAACTGTTGCATTTTGAGGATCACAAATC-ATATAGAACCGTTCTGGAGTACGCCGCACTTACTAGGTGTCAGCTGCC-TGATAGATGACCCTGTTTC-GCAAATATTTGTTTCTCACTAGTCATGTTTCGAC-----TGAAACTTAACTTCTCTTAGGCGTTAAGATAAAATTTAGTTACGCGTTCAATAAAGTACT-CAAACT----TAACCGA-ACATTATTATTTCATCATGTAATA-CAGC-TATACTCTACACGTCTGACACAGTCATTTAC-ATACCCGGT-TCCGACTCATATCAACATAA--------ATCTCGTATGTAAGTC------------ATATGGTATACTAGTGTAGCACTTTGTTCACA--TTAGACAAATAAAATGGTTATATAATG-TAAACAATAATT--ACAATTGAGTAATC-TAAAGATGTTAT------TATCTCTTAT---TGTCA-ATTTCGCACAAAACGTTTGCGAGAAAAAGTGTAG--TTTAATGGAG-AATTA-------------AAGCGCGCACATGACTAATCT--ATTTTTTAGACTACTTGATATCATTGCAT---GT-GAGTATTATATAAGGGAACCGTAAAC-GT-CGATAAACTGCAATCGCTC-CAATTTATCGTGGTCTGAT-TTTGTACAATAATACACTACAAAGAGT-ATTATGTAGTAGCAGAAACTAGCTAAAACGTCCGTTATTCTCATAAG-CTA--ACATGTT--T----AATT-TAAAACATTTTTGT-ATAAG-AAA-CTG--GCAAAA-ATAGTGCCA-AAATATCATAAA----TATTTCAA--TATATTA-GGACTTGTAAATA-TATACCTACAATGGCCGT-AATTTTGC--TTTA---AAATG-GTTCTGGTAGTATATGCAGGAAACAA-AGTTAAACCC-AAAAAACTGCATT-CAAAGA-GG---TA------A-AG-ACAAAAAAAAAAGTGATGCAACGCTTTTGATATAT--CC---GAATAAAGA--AAAAA-TGT---C-CACCC---T-ATGA-CTTTGATC-CCTCAGAT---TTGCAGCCTTTA---T-CG-ACTTTAGAA--G-TGAC-ATCCGGCCTA-GCATGTCGCAC-TGGAAT-TCATAGAAGAGTTTGAAGTCGGTCTTGAGATTTTGC-ATGTAAACCAAATATCTGTCCATTCAAA-AACC--AT--TTC---TAGGCCAA--TTTCATAAT-
gi|10 : c-C-TA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCTTTTCC-TGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTC-CC-----GCAGTCTT-----GCCAA---TTAT-------T---GT-------GCATTCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAA--ACACTATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCCCAC--CAT-----AGAGG---TATCGTTT-GATAAGAAATTAA--GGTAC-GCC-TGGTTCTAAT---T---GGTAGTGCT-T----TCCATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAAAGA--TA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GC--AAAGATTTCCAA-CTT-AAGCgccga
gi|11 : CTGAAACGT-CGTTATT--CAT-AGGCTATAAC----C--CTGTTAATTCTATAACATTT---TTATAAG-AAAACTGAGGCAAAA-ATAGTGCCACA--TATCAT-AAATAATAT----A--TATA-TA-A-TGTTGCAAATT-AATACC-AAAATGGCTGT-A--ATTGTTTTTTTTTTAAATGTGTG--GGTAGTATAA-CAGAAACAAAGAGT-AAACAC-AAAAAACTGCATTCCAAAAACGGGTTTAGTTTTTA-AG-AA-AAAAAAAAAGT-ATGCAACGC--CTGATATATGCAG----AATA---AAGGAAAAGT-TAACTGCATCCCTTTAACAACCT
gi|12 : aGACCTT------C-----AAATTTTGCAGCCTTTGATTTTCGACCTGTAGAAGGGGTGATGATCCGGTCTACGCATGTT-CACCTGG-ACA-CATAGAA-GATGTT-G-T-GGTCTT-CGTTTTGGCTAT-TAA--CAAATTTGTG-CCATCA--A-AACCCGATTGTTTCC-TAGGACACTTTTTCAGAA
gi|13 : TT--CTATCCAAATCC-G-CG-GAACA----GTATT--AGAACCGAAAATCCCC-GCTTCTCTCTAT--A-TGT---CTTATAAACTTGGATC---TCCA-CAG---CATCGT---------CGT-----TTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTTAA------CAAGGCTTTT-CAAAT-GGTACT-TGCCTTCTG-AAGCAATTAA---------ATC-----AT---------------gtcccgaaggt
gi|14 : TACCCGGTCCC-GACT------------ATCAAATAAATC-------TAGTAGTAAGCATATGTTATATAGTGTA---------CGCTTTGTTCACACTT-AGACAAATAAAAT-GT--TAAAATGT-AAACAATAATT-ATCAATTGAGTA--CCTAAAGATGTTATTACATGTATCTCTTATCCATGTCgtc
gi|15 : CAGAACA--GCTGAAACGT-CGTTATG-TCAT-AGGCTATAAC----TGTT----AATT-TATAACATTT---T-ATAAG-AA
gi|16 : TAAA-CGCA-TAA-CATCATC-----CACCTGTG-ACCGTCCCATATGTCCGATGACCTTTCAAGCGTTagcagcag
gi|2 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATA--CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--A-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT---AA---GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--T-TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAAC--TT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGA-AGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TGG--ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGGtg
gi|3 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATA--CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--A-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT---AA---GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--T-TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAAC--TT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGA-AGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TGG--ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|4 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATA--CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--A-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT---AA---GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--T-TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAAC--TT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGA-AGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TGG--ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|5 : AATTGAGTA--CCTAAAGATGTTAT------TATCTCTTGTCCATGTCACATTTC-CACAAAACG-TTGCGAG-AAAGGTGTAG--TTTAACT--GAAATTAAGC-GTGATTTTCAAGCGCGCAAATGAC-GAGCTA---TTTTTA--------GACA-CATTG-GTATCATGCAG-----TATAAGGG-AC-GTAA-CTGT-TAATAAATGCTAATCGCGCGAAAGTTAGCGTA--CTGAT-TTTGTACAAT-ATGCACTA-GAAGAGT-ATTATGTAGTAGCAGAACA--GCTAAAACGT-CGTTATT-TCATAAG-CTA--ACTG--T--T----AATT-TATAACATTT---T-ATAAGAAAA-CTG--GCAAAA-ATAGTGCCA-AAATATCAT-AA-----AT----AATCATA-TATAATTTTGCAAATATAATACC--AAATGGCTGTAA--TTTG-CTTTTA---AAATG-GTGCTGGTAGTATA--CAG-AAAC-AGAGTTAAACACAAAAAAACTGCATT-CTAAAA-GG---TA------AGAACA--AAAAAAAAAAT-ATGCAACGC--TTGATATATC-AGAATAAAGA---A--AAAAA-T------GCACCT-----ATGACCTTTGACCTC-----AAT--TTGCAGCCTT--ATTT-CG-ACCTTAGAAGGG-TGAC-ATCCGGCCTA-GCATGT----CAT-GGACACCATAG-AAGATGTT-GTT-GGTCTT-AG-TTTTGC-AT-TAA--CAAA-TTTTG-CCATC---ATAACC--AT--TTTC--TAGGCCACTTTTTCAGAATCCGAGG
gi|6 : CGTTACT--AG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTTGG--TACTTCAGTTTA-TTT-TCAGTG-GT-CTCTTCATCATCATCAA-GTAGACCAAACA-ACG-TAAGT------GTTTCATTTGAA-ACTT---GCAACCGCC-TA--GCCT-AC-GT--GATG-C--AAA---AC---ATA-TTTCTTG--CTTGGTC-ATT-TCGTG---CAATAC----CAATAATCCC-CC-----GCAGTCTT-----GCAAATC-TTATTGATCAATTCAGTG------GCTT--GG-T-------CT--GCA-GGTAC-----TTCGTTGA---AC-CTAT-----GT-TCACTTCTTTT-CACAACAAACATTTCCA-C--CAT-----A---A---ATTCG-TT-GA-A-GAAGTTGG--G---C-G-C-AG--TCT--T---T---GGTAGTGCT-T----T-CATATCCGC--TAGATAT--ACTG----GTCCC-CC--ATCTCGTGTAGTTT-GTGT-GA-TCA-----TA---CACA-GT-GCTGTTAAC-CA-A-GGCAA-CATCGCA---GC--AAAGATATCC-A-TGTCAAGCAGCCAA-----TT------------------GCTCTGATGAAGC----TTAACA--AGAGCT---CGACC-ATTCTC-AT-GTACGAATGCC----------AAA-AAGCAAAATT-CTTAAT-CTGCTG--CATTTCAGAC-TCGAA--TTCG-CTCAG--CAAATCCT-T-ta
gi|7 : ctgctcCGTTTATCTAG-ATATTTCCTGCATTTGTTTAATACGTTGGTTGGTT-GGGTACTTCAGTTTAATTT-TCAGTG-GTGCTCTTCATCATCATCAA-GTAGACCAAACAAGCG-TAAGTGTCCTCGTTCGATTTG-AGACTTGTGGCGACGGCC-TAGGGCCCAACGGTGAGATG-CGAAGA---ACAAGATG-ATTCTTG--C-TTGTCGATTGTCTTGGGTTAA-ATGAAACAATAT-CCCGCCGGCGGGCAGTCCTGTTGGGCAAATCGTTATTTGA---TCCATTGCAGATTGCTT--GG-T-------CTGGGCA-GGGACCTTAGTTCGTTGGA--AC-CTAT-----GTAC-ATTTCTTTTGCACAAACAA-ACTTTC--C--CACGCATAA---A---TTTCG-TT----AAGAAGTTAAAGG---CGG-C-TG--TC---T---TTGGGGTAGTCCTGTTGCATTCATATCCGC--TAGATATTAGCTG----GT--CGCC--ATCTCGCGTAG-TT-GTGTGTATTCA--T--TATCTTACAGGTGGCTGTTAACGCA-AGGGCAA-CATCGCAGGGGC-AAAAGATTTCC-A-C-TGAAGCgtac
gi|8 : ccg---TTTTG-TT-GA-AG-AAGTTGG--G---C-G-C-AG--TC---T---TT--GGTAGTGCT-T----T-CATATC--CGCTAGATAT--ACTA----GT--C-CCCCATCTCGCGTAG-TTTGTGT-GA-TCA-----TG---CACA-GT-GCTGTTAAC-CA-A-GGC-AACATCGCA---GCAAA--GATTTCC-A-TGTGAAGCAGCTAA--------------------CTG---CTCTTTTGAAGC----TTAACA--AGAGCT---CGA-CCATTCTC-AT-GTATGAATGCC----------AAA-AAGCAAAA-TTCTTAATC-TGCTG--CATTTCAGAC-TCAAA--TTCGCCCCG---CAAATCCC-T-GTACC----CTGACTTTGAAATC-TTGTCTGCCAA-TA-CT-GCATTTGATTCTT-GGATG----TTCTCCCTATTTGAC--AGAGG-CAAA--TGC--AAGTTCC-ATGTTCA-AAATTTCATCATCTAGCGATGGCACGTCTAT-CTT--CTTTTCAC-GCAGTCAA-TCAAAGAA--ATATATC--CATTTGAT--GCGCCACAA-CGCCTCAT--ACATCAG-TTTGT-GCCCACGCACT--GCTTTTA
gi|9 : TCAG-CTTGT-GCCCACGCACT--GCTTTTA----TAGGCTTT-----A-CCAAATCC-G-CG-GAACA----GTATT--AGGACCGAAAATTCCC-GCTTCTATCCAT--A-TGT---CTTCTAAACCTGGATC---TCCA-TAG---CATCGTCGTTT--T-CATAGGTGTTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTGAA------CAAGGCTTTT-CAAAT-GG-TAT-TTCCTTCTG-AAGCAATTAAATCATGTCTATCAGATAAT---------------CTTAAA-CGCA-TTA-CATCTTC-----CAACTGT-GACCGCTCGATTTGTCCGATGACTTTTCAAGCTTTTGTA-CATTATGCAAGATA-------GTTT-GCT-TAC-CCT-CAACCC--TCTGACAGAACA-TG-CATTTTGA------CCAATCAACAGGGT--CGCT-TGACCTGCGCT----TTAC--AGTGTC-GCTG-CCTGT-AGATGACCC
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11111 111 1 1 1 222 111 1 11 111 1111 22 11111 222222 3333333 111111 3333333 1 11111 11 22222 11 11111 1111111111111 1 111 11 11111111111 111111 11 2222 22222 1 1 222222222222222222 1111 1111 111 2222222222 1 111 1111 1 1 1 11 11 11 22 222 11 1111 111 111 1 111 1111 111111 2222 11 4444444444444444444444444444444444 1 1 11111 2222222 1 11 222222 22 1111 11 11 1 11 11 222222 111 11 1 11111 1 1 11111111111111111111111111111111111111111111111111111111111111111111 2222 1 1 111111 2 11 11 22222222 111 22222 1 2 11 1 1 11 1 1 1 11 333333333333 11 111 1 1111 1111111 111 1 11 22 111 111111 1 11111111 111111 11111 11111 2222222222 22 1 111 11 1
lowQualScore : 2 2 6 6 6 99 99 6 99 3 6 6 5 6 22 6 1 9 66666 1 111 1 5 77 7 5 77 1 77 000 000 1 55 5 5 5 000 5 2222 11 5 44444 555555 1 66 0000000 6 666666 99 8 7777777 77 1 44444 33 5 88888 5 5 4 5 00 88888 9999999999999 5 5 0 2 66 777 5 5 5 33 88888888888 5 222222 33 66 66 1111 66 5 66 5 5 5 5 33333 888 77 5 5 0 5 0 5 2 888 9 3 5 5 3 5 666666666666666666 444 4444 5555 111 6 6 6 6 9999999999 1 6 6 1 6 6 99 6 888 6 6 4444 0 8 8 8 8 7777 0 8 6 5 0 8 0 0 11 88 11 8 11 0 0 5 11 6 11 99 0 5 99 7 6 9 000 99 0 55 1111 111 111 5 111 99 1111 99 2 6 1 999999 7777 55 6 6 7 5555555555555555555555555555555555 6 5 6 5 66666 6 6666666 3 8 0 3 11 0 8 8 333333 88 8 8 1 7777 11 8 8 3 33 0 33 2 33 888888 111 33 3 3 2 0 88888 3 3 0 0 3 11111111111111111111111111111111111111111111111111111111111111111111 0 8 2222 0 0 1 99 6 999999 8 0 8 8 00 11 8 0 5 8 55 33333333 8 8 444 3 00000 8 5 5 0 0 0 11 0 8 8 0 22 44 1 5 5 1 1 55 000000000000 5 33 000 5 5 6 99 5 6 6 4444 4444444 6 6 1 6 6 6 99 22 111 6 5 55 1 22 6 6 111 999999 6 6 99 6 5 99 1 88888888 111111 6 77777 44444 6 1111111111 1 1 6 7 1 6 44 5 6 88 3 1 1 1 6 2 6 6 3 6 6 99 6 888 6 99 99 22 3 8
lowQualScore : . . . . . .. .. . .. . . . . . .. . . . ..... . ... . . .. . . .. . .. ... ... . .. . . . ... . .... .. . ..... ...... . .. ....... . ...... .. . ....... .. . ..... .. . ..... . . . . .. ..... ............. . . . . .. ... . . . .. ........... . ...... .. .. .. .... .. . .. . . . . ..... ... .. . . . . . . . ... . . . . . . .................. ... .... .... ... . . . . .......... . . . . . . .. . ... . . .... . . . . . .... . . . . . . . . .. .. .. . .. . . . .. . .. .. . . .. . . . ... .. . .. .... ... ... . ... .. .... .. . . . ...... .... .. . . . .................................. . . . . ..... . ....... . . . . .. . . . ...... .. . . . .... .. . . . .. . .. . .. ...... ... .. . . . . ..... . . . . . .................................................................... . . .... . . . .. . ...... . . . . .. .. . . . . .. ........ . . ... . ..... . . . . . . .. . . . . .. .. . . . . . .. ............ . .. ... . . . .. . . . .... ....... . . . . . . .. .. ... . . .. . .. . . ... ...... . . .. . . .. . ........ ...... . ..... ..... . .......... . . . . . . .. . . .. . . . . . . . . . . . .. . ... . .. .. .. . .
lowQualScore : 5 5 7 7 7 22 22 7 22 3 7 7 0 7 00 7 7 3 77777 7 777 4 7 99 1 7 99 4 99 000 000 4 77 7 7 7 000 7 1111 44 7 33333 777777 7 44 7777777 6 444444 00 9 1111111 99 4 33333 66 7 66666 7 7 3 7 77 33333 3333333333333 0 0 0 2 99 555 0 0 0 88 22222222222 0 444444 88 99 99 2222 99 0 99 0 0 0 0 44444 888 55 0 0 0 0 0 0 5 888 4 2 0 0 1 6 222222222222222222 000 2222 2222 777 7 7 7 7 2222222222 7 7 7 0 7 7 22 7 333 7 7 8888 8 0 0 0 0 0000 8 0 0 6 6 0 6 0 66 88 00 0 00 6 6 0 00 7 77 22 8 0 22 3 7 8 555 22 7 77 0000 777 777 5 777 22 5555 22 5 7 0 222222 7777 88 7 7 3 8888888888888888888888888888888888 7 0 7 5 77777 7 0000000 2 0 6 2 00 6 0 0 000000 44 0 0 0 0000 00 0 0 2 88 0 88 5 88 888888 000 88 2 2 5 0 55555 2 2 0 0 2 00000000000000000000000000000000000000000000000000000000000000000000 8 0 4444 6 0 0 22 7 222222 0 0 0 0 66 00 0 8 0 0 88 88888888 0 0 000 8 00000 0 0 0 8 0 0 00 0 0 0 6 00 00 4 7 7 4 4 77 000000000000 7 33 000 7 7 7 22 0 7 7 2222 3333333 7 7 7 7 7 7 22 00 777 7 5 88 7 22 7 7 777 222222 7 7 22 7 0 22 0 33333333 888888 7 55555 00000 7 3333333333 0 0 7 3 0 7 33 0 7 88 2 0 7 7 7 5 7 7 5 7 7 22 7 333 7 22 22 88 3 0
consensus : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCNNCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTT-----GCGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--C--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--AGAGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT-GCCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCGCTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTTT-CAAA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC-ACAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGT-TA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--TATAATGTTAAACAATAATTCAACAATTGANTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAACATTT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGGTAGTATA--CAGAAAACAAGAGTTAAACAC-AAAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATNTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCNGCCNTTAATTT-CGAACNTTAGAAGGG-TGGC-ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
Reference ( family-12376 ) : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCNNCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTT-----GCGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--C--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--AGAGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT-GCCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCGCTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTTT-CAAA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC-ACAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGT-TA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--TATAATGTTAAACAATAATTCAACAATTGANTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAACATTT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGGTAGTATA--CAGAAAACAAGAGTTAAACAC-AAAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATNTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCNGCCNTTAATTT-CGAACNTTAGAAGGG-TGGC-ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|1 : CGTTA---TAGTAT-TTTC-T-CATTT--CTAATAC-T--GT--GTT-G--TA-TTCAGTTTT-TTTGTCAGTG-GT-CT--TCATCACCATCAAAGTTAGACAAACA-ACGT--AGTG-------TTCATTTCGAGCTCT---GCGACCG-CCTA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCTTTTCC-TGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTC-CC-----GCAGTCTT-----GCCAAT---TAT-------T---GTG-------CATTCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAAACAC--TATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCC--CACCAT-----A---GAGGTATCG-TTTGATAAGAAATTAA--GGTAC-G-CCTGGTTC---TAATT---GGTAGTGCT-T----TCCATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAA--AGATA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GCAAA--GATTTCC-AACTT-AAGCAGCCAACAAATTCACTGTCAGTTTCTCTGTG-CTCTCATGAAGCAAGTTTAAAATTAGAGCTTCGCAC-C-ATTCTCTATCGTAAGAATGCCCTAATAAAGCAAAAAATTCAAA-T-TATAATCT-----GCGATTTCAGCCCTCAAAAATTCG-CTAAAAGCAAATCCCATGTCACCTGAACTGAA---AAGTGCATTGTCTGTCAAATATCTGCGAACGGATTCTTTGGATGT-----CTACCTATTTGACATAGAGGACAAATCAAGCATAATCC--AAGTTTA-AAATTTCATCATCTAGCGATGACACGTCTATGCTT--CTTTTCAC--CAGTCAAT-CAAAAAACTAAATATCATC-TCTGATATGCGCCACAAACGCCTCATTAATA-CAGTCTTGTTGCCCACGCACTGACTTCT--ATA-TACGCTTTTGTCTATCCAAGATCAGTCGG--ACA---AGTATTTTAGA--CAAAAATCCCC-ACTTCTATCCATTGAGTGTGATCTTCTATAACTGGATCATTTCCA-TGGAATTATAGT--TTTCATTCG---GC-TTTTGTTTCGTGTTG-CCGTATTTCTTT-AAACTAAAAAAGCACAAGGCTTTTTCAAAATGG-ATTCTTCCTTCTGAA-GCAAGTAA---------ATC-----ATAGTTACAATAAAATATTTAAAACGCAATAA-CATCATCACGTGCAA--GTG----CTC-GATAT---CGATGACTCTTTA--------TAGCGTTATGTAAGAGACAAGAAAGTTTT-CTGTAC-CCGTCAACCCGACTTGACATAACTGTTGCATTTTGAGGATCACAAATC-ATATAGAACCGTTCTGGAGTACGCCGCACTTACTAGGTGTCAGCTGCC-TGATAGATGACCCTGTTTC-GCAAATATTTGTTTCTCACTAGTCATGTTTCGAC-----TGAAACTTAACTTCTCTTAGGCGTTAAGATAAAATTTAGTTACGCGTTCAATAAAGTACT-CAAACT----TAACCGA-ACATTATTATTTCATCATGTAATA-CAGC-TATACTCTACACGTCTGACACAGTCATTTAC-ATACCCGGT-TCCGACTCATATCAACATAA--------ATCTCGTATGTAAGTC------------ATATGGTATACTAGTGTAGCACTTTGTTCACA--TTAGACAAATAAAATGGTTATATAATG-TAAACAATAATT--ACAATTGAGTAATC-TAAAGATGTTAT------TATCTCTTAT---TGTCA-ATTTCGCACAAAACGTTTGCGAGAAAAAGTGTAG--TTTAATGGAG-AATTA-------------AAGCGCGCACATGACTAATCT--ATTTTTTAGACTACTTGATATCATTGCAT---GT-GAGTATTATATAAGGGAACCGTAAAC-GT-CGATAAACTGCAATCGCTC-CAATTTATCGTGGTCTGAT-TTTGTACAATAATACACTACAAAGAGT-ATTATGTAGTAGCAGAAACTAGCTAAAACGTCCGTTATTCTCATAAG-CTA--ACATGTT--T----AATT-TAAAACATTTTTGT-ATAAG-AAA-CTG--GCAAAA-ATAGTGCCA-AAATATCATAAA----TATTTCAA--TATATTA-GGACTTGTAAATA-TATACCTACAATGGCCGT-AATTTTGC--TTTA---AAATG-GTTCTGGTAGTATATGCAGGAAACAA-AGTTAAACCC-AAAAAACTGCATT-CAAAGA-GG---TA------A-AG-ACAAAAAAAAAAGTGATGCAACGCTTTTGATATAT--CC---GAATAAAGA--AAAAA-TGT---C-CACCC---T-ATGA-CTTTGATC-CCTCAGAT---TTGCAGCCTTTA---T-CG-ACTTTAGAA--G-TGAC-ATCCGGCCTA-GCATGTCGCAC-TGGAAT-TCATAGAAGAGTTTGAAGTCGGTCTTGAGATTTTGC-ATGTAAACCAAATATCTGTCCATTCAAA-AACC--AT--TTC---TAGGCCAA--TTTCATAAT-
gi|10 : c-C-TA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCTTTTCC-TGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTC-CC-----GCAGTCTT-----GCCAA---TTAT-------T---GT-------GCATTCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAA--ACACTATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCCCAC--CAT-----AGAGG---TATCGTTT-GATAAGAAATTAA--GGTAC-GCC-TGGTTCTAAT---T---GGTAGTGCT-T----TCCATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAAAGA--TA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GC--AAAGATTTCCAA-CTT-AAGCgccga
gi|11 : CTGAAACGT-CGTTATT--CAT-AGGCTATAAC----C--CTGTTAATTCTATAACATTT---TTATAAG-AAAACTGAGGCAAAA-ATAGTGCCACA--TATCAT-AAATAATAT----A--TATA-TA-A-TGTTGCAAATT-AATACC-AAAATGGCTGT-A--ATTGTTTTTTTTTTAAATGTGTG--GGTAGTATAA-CAGAAACAAAGAGT-AAACAC-AAAAAACTGCATTCCAAAAACGGGTTTAGTTTTTA-AG-AA-AAAAAAAAAGT-ATGCAACGC--CTGATATATGCAG----AATA---AAGGAAAAGT-TAACTGCATCCCTTTAACAACCT
gi|12 : aGACCTT------C-----AAATTTTGCAGCCTTTGATTTTCGACCTGTAGAAGGGGTGATGATCCGGTCTACGCATGTT-CACCTGG-ACA-CATAGAA-GATGTT-G-T-GGTCTT-CGTTTTGGCTAT-TAA--CAAATTTGTG-CCATCA--A-AACCCGATTGTTTCC-TAGGACACTTTTTCAGAA
gi|13 : TT--CTATCCAAATCC-G-CG-GAACA----GTATT--AGAACCGAAAATCCCC-GCTTCTCTCTAT--A-TGT---CTTATAAACTTGGATC---TCCA-CAG---CATCGT---------CGT-----TTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTTAA------CAAGGCTTTT-CAAAT-GGTACT-TGCCTTCTG-AAGCAATTAA---------ATC-----AT---------------gtcccgaaggt
gi|14 : TACCCGGTCCC-GACT------------ATCAAATAAATC-------TAGTAGTAAGCATATGTTATATAGTGTA---------CGCTTTGTTCACACTT-AGACAAATAAAAT-GT--TAAAATG-TAAACAATAATT-ATCAATTGAGTA--CCTAAAGATGTTATTACATGTATCTCTTATCCATGTCgtc
gi|15 : CAGAACA--GCTGAAACGT-CGTTATG-TCAT-AGGCTATAAC----TGTT----AATT-TATAACATTT---T-ATAAG-AA
gi|16 : TAAA-CGCA-TAA-CATCATC-----CACCTGTG-ACCGTCCCATATGTCCGATGACCTTTCAAGCGTTagcagcag
gi|2 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATA--CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--A-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--T-TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAAC--TT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGA-AGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TGG--ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGGtg
gi|3 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATA--CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--A-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--T-TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAAC--TT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGA-AGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TGG--ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|4 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATA--CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--A-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--T-TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAAC--TT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGA-AGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TGG--ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|5 : AATTGAGTA--CCTAAAGATGTTAT------TATCTCTTGTCCATGTCACATTTC-CACAAAACG-TTGCGAG-AAAGGTGTAG--TTTAACT--GAAATTAAGC-GTGATTTTCAAGCGCGCAAATGAC-GAGCTA---TTTTTA--------GACA-CATTG-GTATCATGCAG-----TATAAGGG-AC-GTAA-CTGT-TAATAAATGCTAATCGCGCGAAAGTTAGCGTA--CTGAT-TTTGTACAAT-ATGCACTA-GAAGAGT-ATTATGTAGTAGCAGAACA--GCTAAAACGT-CGTTATT-TCATAAG-CTA--ACTG--T--T----AATT-TATAACATTT---T-ATAAGAAAA-CTG--GCAAAA-ATAGTGCCA-AAATATCAT-AA-----AT----AATCATA-TATAATTTTGCAAATATAATACC--AAATGGCTGTAA--TTTG-CTTTTA---AAATG-GTGCTGGTAGTATA--CAG-AAAC-AGAGTTAAACACAAAAAAACTGCATT-CTAAAA-GG---TA------AGAACA--AAAAAAAAAAT-ATGCAACGC--TTGATATATC-AGAATAAAGA---A--AAAAA-T------GCACCT-----ATGACCTTTGACCTC-----AAT--TTGCAGCCTT--ATTT-CG-ACCTTAGAAGGG-TGAC-ATCCGGCCTA-GCATGT----CAT-GGACACCATAG-AAGATGTT-GTT-GGTCTT-AG-TTTTGC-AT-TAA--CAAA-TTTTG-CCATC---ATAACC--AT--TTTC--TAGGCCACTTTTTCAGAATCCGAGG
gi|6 : CGTTACT--AG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTTGG--TACTTCAGTTTA-TTT-TCAGTG-GT-CTCTTCATCATCATCAA-GTAGACCAAACA-ACG-TAAGT------GTTTCATTTGAA-ACTT---GCAACCGCC-TA--GCCT-AC-GT--GATG-C--AAA---AC---ATA-TTTCTTG--CTTGGTC-ATT-TCGTG---CAATAC----CAATAATCCC-CC-----GCAGTCTT-----GCAAATC-TTATTGATCAATTCAGTG------GCTT--GG-T-------CT--GCA-GGTAC-----TTCGTTGA---AC-CTAT-----GT-TCACTTCTTTT-CACAACAAACATTTCCA-C--CAT-----A---A---ATTCG-TT-GA-A-GAAGTTGG--G---C-G-C-AG--TCT--T---T---GGTAGTGCT-T----T-CATATCCGC--TAGATAT--ACTG----GTCCC-CC--ATCTCGTGTAGTTT-GTGT-GA-TCA-----TA---CACA-GT-GCTGTTAAC-CA-A-GGCAA-CATCGCA---GC--AAAGATATCC-A-TGTCAAGCAGCCAA-----TT------------------GCTCTGATGAAGC----TTAACA--AGAGCT---CGACC-ATTCTC-AT-GTACGAATGCC----------AAA-AAGCAAAATT-CTTAAT-CTGCTG--CATTTCAGAC-TCGAA--TTCG-CTCAG--CAAATCCT-T-ta
gi|7 : ctgctcCGTTTATCTAG-ATATTTCCTGCATTTGTTTAATACGTTGGTTGGTT-GGGTACTTCAGTTTAATTT-TCAGTG-GTGCTCTTCATCATCATCAA-GTAGACCAAACAAGCG-TAAGTGTCCTCGTTCGATTTG-AGACTTGTGGCGACGGCC-TAGGGCCCAACGGTGAGATG-CGAAGA---ACAAGATG-ATTCTTG--C-TTGTCGATTGTCTTGGGTTAA-ATGAAACAATAT-CCCGCCGGCGGGCAGTCCTGTTGGGCAAATCGTTATTTGA---TCCATTGCAGATTGCTT--GG-T-------CTGGGCA-GGGACCTTAGTTCGTTGGA--AC-CTAT-----GTAC-ATTTCTTTTGCACAAACAA-ACTTTC--C--CACGCATAA---A---TTTCG-TT----AAGAAGTTAAAGG---CGG-C-TG--TC---T---TTGGGGTAGTCCTGTTGCATTCATATCCGC--TAGATATTAGCTG----GT--CGCC--ATCTCGCGTAG-TT-GTGTGTATTCA--T--TATCTTACAGGTGGCTGTTAACGCA-AGGGCAA-CATCGCAGGGGC-AAAAGATTTCC-A-C-TGAAGCgtac
gi|8 : ccg---TTTTG-TT-GA-AG-AAGTTGG--G---C-G-C-AG--TC---T---TT--GGTAGTGCT-T----T-CATATC--CGCTAGATAT--ACTA----GT--C-CCCCATCTCGCGTAG-TTTGTGT-GA-TCA-----TG---CACA-GT-GCTGTTAAC-CA-A-GGC-AACATCGCA---GCAAA--GATTTCC-A-TGTGAAGCAGCTAA--------------------CTG---CTCTTTTGAAGC----TTAACA--AGAGCT---CGA-CCATTCTC-AT-GTATGAATGCC----------AAA-AAGCAAAA-TTCTTAATC-TGCTG--CATTTCAGAC-TCAAA--TTCGCCCCG---CAAATCCC-T-GTACC----CTGACTTTGAAATC-TTGTCTGCCAA-TA-CT-GCATTTGATTCTT-GGATG----TTCTCCCTATTTGAC--AGAGG-CAAA--TGC--AAGTTCC-ATGTTCA-AAATTTCATCATCTAGCGATGGCACGTCTAT-CTT--CTTTTCAC-GCAGTCAA-TCAAAGAA--ATATATC--CATTTGAT--GCGCCACAA-CGCCTCAT--ACATCAG-TTTGT-GCCCACGCACT--GCTTTTA
gi|9 : TCAG-CTTGT-GCCCACGCACT--GCTTTTA----TAGGCTTT-----A-CCAAATCC-G-CG-GAACA----GTATT--AGGACCGAAAATTCCC-GCTTCTATCCAT--A-TGT---CTTCTAAACCTGGATC---TCCA-TAG---CATCGTCGTTT--T-CATAGGTGTTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTGAA------CAAGGCTTTT-CAAA--TG-GTATTTCCTTCTG-AAGCAATTAAATCATGTCTATCAGATAAT---------------CTTAAA-CGCA-TTA-CATCTTC-----CAACTGT-GACCGCTCGATTTGTCCGATGACTTTTCAAGCTTTTGTA-CATTATGCAAGATA-------GTTT-GCT-TAC-CCT-CAACCC--TCTGACAGAACA-TG-CATTTTGA------CCAATCAACAGGGT--CGCT-TGACCTGCGCT----TTAC--AGTGTC-GCTG-CCTGT-AGATGACCC
blockSeqs : C C . A G GT TG G GG C A . C G CA . T C TCCTC A GTG C . GG C G GA G GA TAG AAG C TC T G G GGT T GAAA AT G GGCGG GTTGGG C CG TGATCAA C CAGATT TC T GGAATGG GG C CTTAG C A AATCA A C C G CA CAC GCATAAA T . T A AG GTA G C . GT TAATT G TGCATT CG GC TA AGAC CC G CC T T G T AGA TCT GG G G C G A A C GGG A A A . T G TCACCAGTT TGG . AG . C C . . . T T T C G . . C G . . T . . . . TTCT . A A T . A G TT T . A . C . . G . G . A . A TGC . CA AC . . A . CG AT AG G . T . TCA T T G A ATCATGTCTATCAGATAAT . C . T . G . C . T C . . . . AA . . T . . . . T . . . C . . A . A A C . A A A . . A ATCAAATAAATCTAGTAGTAAGCATATGTTATATAGTGTA . TA T C G . C TACATG . C . . GT . A G . AC AC . . ATC A . . G C C G . G . . A TA T G . . A G TA CCTGTT C AT . T A A AG C C . ATAA AAT . T A T . A . TT TTT T T A A AA C C GTT GTTTTT G C A . G . A CAGAATA AAG G TAAC CTTTA T AAATT A T T A T G TG G C TT C G T A . G . . T T . . . A T CG TG TA T C
blockSeqs : C C . . . . . . . C . . C . CA . T C . A . C . . A . . . . . . . . . . . . . . A . . G G C TTGA C . TT C . . . . C . . . . C . A AC AGAGG . . . G . . . . . . TTTGG . TC CG . . . . . . . . . . G . G . . . . A . C . A A . . T G TCACCAGTT TGG . AG . . . . . . T . . C G . . . . . . T . . . . TTCT . A A T . A G TT T . . . C . . G . G . A . A TGC . CA AC . . A . . AT . G . A . TCA . . G A CATCAT . C . T . G . C . T C . . . . . . . T . . . . T . . . C . . A . A A C . A A A . . A AATCTAAATATGGA . T T C C . G . . . . . GT . . G . AC AC . . . A . . G C C . . G . . A TA T G . . . G TA TGTT . AT . . . . . C C . . A . . A . . . . CC . . T . A A . . . . . C C . G . T GCAG A . T TA . AAT T A . A A . C G . TT A G T A . G . . T . . . . . . . . TA T .
blockSeqs : C C . . . . . . . . . . C . CA . T C . A . . . . . . . . . . . . . . . . . . . T . . G G C . C . TT C . . . . C . . . . C . A T AA . . . G . . . . . . TTT . TA . . . . . . . . . . . G . G . . . . . . C . A A . . T G TCACCAGTT TGG . A . . . . . . T . . C G . . . . . . T . . . . TTCT . A A T . A G TT T . . . C . . . . G . A . A TGC . CA AC . . A . . AT . G . A . . . . G A CATCAT . . . T . G . C . T C . . . . . . . T . . . . T . . . C . . A . A A C . A A A . . A AATCTAAATATGGA . T T C C . G . . . . . GT . . G . AC AC . . . A . . G C C . . G . . A TA T G . . . . . TGTT . AT . . . . . C C . . A . . A . . . . CC . . . . A . . . . . . C C . . . T AGA A . T TA . AA T A . A A . . . . TT A G T A . G . . T . . . . . . . . TA . .
blockSeqs : C C . . . . . . . . . . . . AT . A . . A . . . . . . . . . . . . . . . . . . . . . . . G C . T . TT C . . . . . . . . . C . A T AA . . . G . . . . . . TTT . TA . . . . . . . . . . . G . G . . . . . . C . A A . . T C TT G . A . . . . . . . . . C . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . G A . . . . . T . G . A . . . . T . CATCAT . . . . . G . . . . . . . . . . . . G . . . . AATCTAAATATGGA . T . . C . G . . . . . . . . . . A . . . . G . . . . . . . . . . . GT . . . . . . . TC . . . . . . . . C . . A . . A . . . . CC . . . . A . . . . . . C C . . . T AGA A . T TA . AA T A . A A . . . . T A G C A . T . . T . . . . . . . . C . .
blockSeqs : A . . . . . . . . . . . . . AT . . . . . . . . . . . . . . . . . . . . . . . . . . . . A C . C . . . . . . . . . . . . C . A T AA . . . A . . . . . . TT . TA . . . . . . . . . . . T . G . . . . . . C . . A . . G G . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . G A . . . . . . . . . T . . . . . . ATCAT . . . . . . G . C . . . . . . . . TC . . . . . . . . . . . A . . . . . . . C . . . . . . . . . . . . . . . . A AGA A . . . . AA A T . . C . . . . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . C AA . . . G . . . . . . TT . T . . . . . . . . . . . . . G . . . . . . C . . A . . G G . . . . . . TC . . . . .
blockSeqs : . . . . . . . . . . TT . T . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqCons : *** ** A* G***** C* ******* C* ***** A* T**** AA*********** *** ** TTT******** **** G**** G* TCACCAGTT********* TGG **** A*** *** ********** ** *** T*** TTCT TT T* ** ** ** ** ** ** TGC ** CA AC** *** *** *** AT** ****** **** ** CATCAT**************************** ***** ******* ** ****** ** **** ** T*** ** GT ** AC AC****** ***** ** T* TGTC******** AT *** A****** ** CC ** ** C* ** A***** T**** TA*** AA******** ** ** *** TA
originalCons : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCNNCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTT-----GCGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--C--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TC---T---T---GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAACA--AGAGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT-GCCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCGCTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTTT-CAAA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC-ACAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGT-TA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GT--TATAATGTTAAACAATAATTCAACAATTGANTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-AG-CTA--AC----T--C----AATT-TATAACATTT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TAT----A--TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGGTAGTATA--CAGAAAACAAGAGTTAAACAC-AAAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATNTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCNGCCNTTAATTT-CGAACNTTAGAAGGG-TGGC-ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
finalCons : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCNNCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTTG-----CGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAAC-AC-CTAT-----GT-T-ACTTCTTTT-CACAACAAAA-CTTCCT----CATAA-----------TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TCTTT--------GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCAG----TA---CACAG-T-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAATCACCAGTT---------CTCTGTGGCTCTTATGAAGC----TTAACAA---AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAAT-ATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCACTTCTATCCATAC--TGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTTAT--CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTT----AA--GG-ACTGTTCCTTCTGAAAGCAATTAACATCAT----------------------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC--CAGAGT-CCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGT-TA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GTT---TAATGTTAAACAATAATTCAACAATTGANTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAAGTTTTAATT--G-AATTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTAAC------GACA-CATTG-AT---ATAGAG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-AG-CTA--ACTGTC--------AATT-TATAACATTT---T-ATAAG-AAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TATA------TATA-TA-AATTTTGTAAATA-AATACC-AAAATGGCTGT-A--TTTGCCTTTTA---AAATG-GTGCTGGTAGTATA--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATNTAT--AG---AAATAA-----GAAAA-TT----CGCACCCTA---ATGACCTTTGACC-CAA--------TTGCNGCCNTTAATTT-CGAACNTTAGAAGGG-TGG--ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 11111 111 1 1 1 222 111 1 11 111 1111 22 11111 222222 3333333 111111 3333333 1 11111 11 22222 11 22222 1111111111111 1 111 11 222222 111111 11 2222 22222 1 1 222222222222222222 1111 111 1 111 2222222222 1 111 1111 1 1 1 11 11 11 22 222 1 1111 111 111 1 111 1111 111111 33333 11 4444444444444444444444444444444444 1 1 11111 2222222 1 11 222222 222 1111 11 11 1 11 11 222222 111 11 1 11111 1 1 11111111111111111111111111111111111111111111111111111111111111111111 222 1 1 111111 2 11 11 22222222 111 22222 2 11 1 11 1 1 11 33333 11 111 1 1 2222 1111111 11 11111 1 22 111 111111 1 11111111 111111 11111 11111 2222222222 1111 1 111 11 1
lowQualScore : 2 2 6 6 6 99 99 6 99 3 6 6 5 6 22 6 1 9 66666 1 111 1 5 77 7 5 77 1 77 000 000 1 55 5 5 5 000 5 2222 11 5 44444 555555 1 66 0000000 6 666666 99 8 7777777 77 1 44444 33 5 88888 5 5 4 5 00 11111 9999999999999 5 5 0 2 66 777 5 5 5 33 111111 5 222222 33 66 66 1111 66 5 66 5 5 5 5 33333 888 77 5 5 0 5 0 5 2 888 9 3 5 5 3 5 666666666666666666 444 4444 111 3 111 6 6 6 6 9999999999 1 6 6 1 6 6 99 6 888 6 6 4444 0 8 8 8 8 7777 0 8 6 5 0 8 0 0 11 88 11 8 11 0 0 5 11 6 22 99 0 5 99 7 6 9 000 99 0 5 1111 111 111 5 111 99 1111 99 2 6 1 999999 77777 55 6 6 7 5555555555555555555555555555555555 6 5 6 5 66666 6 6666666 3 8 0 3 11 0 8 8 333333 555 0 8 1 7777 11 8 8 3 33 0 33 2 33 888888 111 33 3 3 2 0 88888 3 3 0 0 3 11111111111111111111111111111111111111111111111111111111111111111111 0 8 222 0 0 1 99 6 999999 8 0 8 8 00 11 8 0 5 8 55 33333333 8 8 5 444 00000 8 0 3 0 11 0 8 8 11 22 44 1 5 5 5 5 1 55 22222 5 33 000 5 3 99 5 6 6 0000 6666666 6 9 6 6 55 33333 6 5 6 99 1 22 6 6 111 999999 6 6 99 6 5 99 1 88888888 111111 6 77777 44444 6 1111111111 1 1 6 7 1 6 7777 5 6 88 3 1 1 1 6 2 6 6 3 6 6 99 6 888 6 99 99 22 3 8
lowQualScore : . . . . . .. .. . .. . . . . . .. . . . ..... . ... . . .. . . .. . .. ... ... . .. . . . ... . .... .. . ..... ...... . .. ....... . ...... .. . ....... .. . ..... .. . ..... . . . . .. ..... ............. . . . . .. ... . . . .. ...... . ...... .. .. .. .... .. . .. . . . . ..... ... .. . . . . . . . ... . . . . . . .................. ... .... ... . ... . . . . .......... . . . . . . .. . ... . . .... . . . . . .... . . . . . . . . .. .. .. . .. . . . .. . .. .. . . .. . . . ... .. . . .... ... ... . ... .. .... .. . . . ...... ..... .. . . . .................................. . . . . ..... . ....... . . . . .. . . . ...... ... . . . .... .. . . . .. . .. . .. ...... ... .. . . . . ..... . . . . . .................................................................... . . ... . . . .. . ...... . . . . .. .. . . . . .. ........ . . . ... ..... . . . . .. . . . .. .. .. . . . . . . .. ..... . .. ... . . .. . . . .... ....... . . . . .. ..... . . . .. . .. . . ... ...... . . .. . . .. . ........ ...... . ..... ..... . .......... . . . . . . .... . . .. . . . . . . . . . . . .. . ... . .. .. .. . .
lowQualScore : 5 5 7 7 7 22 22 7 22 3 7 7 0 7 00 7 7 3 77777 7 777 4 7 99 1 7 99 4 99 000 000 4 77 7 7 7 000 7 1111 44 7 33333 777777 7 44 7777777 6 444444 00 9 1111111 99 4 33333 66 7 66666 7 7 3 7 77 00000 3333333333333 0 0 0 2 99 555 0 0 0 88 000000 0 444444 88 99 99 2222 99 0 99 0 0 0 0 44444 888 55 0 0 0 0 0 0 5 888 4 2 0 0 1 6 222222222222222222 000 2222 777 3 777 7 7 7 7 2222222222 7 7 7 0 7 7 22 7 333 7 7 8888 8 0 0 0 0 0000 8 0 0 6 6 0 6 0 66 88 00 0 00 6 6 0 00 7 55 22 8 0 22 3 7 8 555 22 7 0 0000 777 777 5 777 22 5555 22 5 7 0 222222 55555 88 7 7 3 8888888888888888888888888888888888 7 0 7 5 77777 7 0000000 2 0 6 2 00 6 0 0 000000 000 8 0 0 0000 00 0 0 2 88 0 88 5 88 888888 000 88 2 2 5 0 55555 2 2 0 0 2 00000000000000000000000000000000000000000000000000000000000000000000 8 0 000 6 0 0 22 7 222222 0 0 0 0 66 00 0 8 0 0 88 88888888 0 0 6 000 00000 0 8 2 0 00 0 0 0 66 00 00 4 7 7 7 7 4 77 00000 7 33 000 7 3 22 0 7 7 8888 8888888 7 8 7 7 88 77777 7 5 7 22 7 55 7 7 777 222222 7 7 22 7 0 22 0 33333333 888888 7 55555 00000 7 3333333333 0 0 7 3 0 7 8888 0 7 88 2 0 7 7 7 5 7 7 5 7 7 22 7 333 7 22 22 88 3 0
consensus : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCNNCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTT-----GCGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--C--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TCT--TT--GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAA---CAA-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCGCTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTTTC---AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATCA--CAGAGTCCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGT-TA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GTTA--TAATGTTAAACAATAATTCAACAATTGANTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAAGTTTTAATT--GAA-TTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-ATATAG---AG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-A-G-CTA--AC--TG-TCAATT-TATAACATTT---T-ATAAGAAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TA--T----ATATA-TAAATTTTGTAAATA-AATACC-AAAATGGCTGTA--TTTG---CCTTTTAAAATG-GTGCTGGTAGTAT-A--CAGAAAACAAGAGTTAAACACA-AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATNTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCNGCCNTTAATTT-CGAACNTTAGAAGGG-TG--G-ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
Reference ( family-12376 ) : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCNNCATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATAA-CCC-CC-----GCAGTCTT-----GCGAATC-TTAT-------TCCAGTG------GCTTTCGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TCT--TT--GGTAGTGCT-T----TNCATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAA---CAA-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-CCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCGAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTNGAAACTGAA------CAAGGCTTT-----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CGCA-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC---CAGAGTCCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGGT-TA---------CACTTTGTTCACACTTTAGACAAATAAAAT-GTT---TAATGTTAAACAATAATTCAACAATTGANTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAACG-TTGCGAG-AAAAGTGTAAGTTTTAATT--GAA-TTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-ATATAG---AG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGCGTG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAACGT-CGTTATT-TCAT-A-G-CTA--AC--TG-TCAATT-TATAACATTT---T-ATAAGAAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TA--T----ATATA-TAAATTTTGTAAATA-AATACC-AAAATGGCTGTA--TTTG---CCTTTTAAAATG-GTGCTGGTAGTAT-A--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-ATGCAACGC--TTGATNTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCNGCCNTTAATTT-CGAACNTTAGAAGGG-TG--G-ATCCGGCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|1 : CGTTA---TAGTAT-TTTC-T-CATTT--CTAATAC-T--GT--GTT-G--TA-TTCAGTTTT-TTTGTCAGTG-GT-CT--TCATCACCATCAAAGTTAGACAAACA-ACGT--AGTG-------TTCATTTCGAGCTCT---GCGACCG-CCTA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCTTTTCC-TGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTC-CC-----GCAGTCTT-----GCCAAT---TAT-------T---GTG-------CATTCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAAACAC--TATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCC--CACCAT-----A---GAGGTATCG-TTTGATAAGAAATTAA--GGTAC-G-CCTGGTTCTAATT--GGTAGTGCT-T----TCCATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAA--AGATA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GCAAA--GATTTCC-AACTT-AAGCAGCCAACAAATTCACTGTCAGTTTCTCTGTG-CTCTCATGAAGCAAGTTTAAAATTAG-AGCTTCGCAC-C-ATTCTCTATCGTAAGAATGCCCTAATAAAGCAAAAAATTCAAA-T-TATAATCT-----GCGATTTCAGCCCTCAAAAATTCG-CTAAAAGCAAATCCCATGTCACCTGAACTGAA---AAGTGCATTGTCTGTCAAATATCTGCGAACGGATTCTTTGGATGT-----CTACCTATTTGACATAGAGGACAAATCAAGCATAATCC--AAGTTTA-AAATTTCATCATCTAGCGATGACACGTCTATGCTT--CTTTTCAC--CAGTCAAT-CAAAAAACTAAATATCATC-TCTGATATGCGCCACAAACGCCTCATTAATA-CAGTCTTGTTGCCCACGCACTGACTTCT--ATA-TACGCTTTTGTCTATCCAAGATCAGTCGG--ACA---AGTATTTTAGA--CAAAAATCCCC-ACTTCTATCCATTGAGTGTGATCTTCTATAACTGGATCATTTCCA-TGGAATTATAGT--TTTCATTCG---GC-TTTTGTTTCGTGTTG-CCGTATTTCTTT-AAACTAAAAAAGCACAAGGCTTTTTCAAAAT-GG-ATTCTTCCTTCTGAA-GCAAGTAA---------ATC-----ATAGTTACAATAAAATATTTAAAACGCAATAA-CATCATCACGTGCAA--GTG----CTC-GATAT---CGATGACTCTTTA--------TAGCGTTATGTAAGAGACAAGAAAGTTTT-CTGTAC-CCGTCAACCCGACTTGACATAACTGTTGCATTTTGAGGATCACAAATCATATAGAA-CCGTTCTGGAGTACGCCGCACTTACTAGGTGTCAGCTGCC-TGATAGATGACCCTGTTTC-GCAAATATTTGTTTCTCACTAGTCATGTTTCGAC-----TGAAACTTAACTTCTCTTAGGCGTTAAGATAAAATTTAGTTACGCGTTCAATAAAGTACT-CAAACT----TAACCGA-ACATTATTATTTCATCATGTAATA-CAGC-TATACTCTACACGTCTGACACAGTCATTTAC-ATACCCGGT-TCCGACTCATATCAACATAA--------ATCTCGTATGTAAGTC------------ATATGGTATACTAGTGTAGCACTTTGTTCACA--TTAGACAAATAAAATGGTTATATAATG-TAAACAATAATT--ACAATTGAGTAATC-TAAAGATGTTAT------TATCTCTTAT---TGTCA-ATTTCGCACAAAACGTTTGCGAGAAAAAGTGTAG--TTTAATGGAGAA-TTA-------------AAGCGCGCACATGACTAATCT--ATTTTTTAGACTACTTGATATCATTGCATGT-G---AGTATTATATAAGGGAACCGTAAAC-GT-CGATAAACTGCAATCGCTC-CAATTTATCGTGGTCTGAT-TTTGTACAATAATACACTACAAAGAGT-ATTATGTAGTAGCAGAAACTAGCTAAAACGTCCGTTATTCTCATAA-G-CTA--ACA-TGTTTAATT-TAAAACATTTTTGT-ATAAGAAA-CTG--GCAAAA-ATAGTGCCA-AAATATCATAAA----TA--TTTCAATATATTAGGACTTGTAAATA-TATACCTACAATGGCCGTAATTTTG---C--TTTAAAATG-GTTCTGGTAGTAT-ATGCAGGAAACAA-AGTTAAACCCA-AAAAACTGCATT-CAAAGA-GG---TA------A-AG-ACAAAAAAAAAAGTGATGCAACGCTTTTGATATAT--CC---GAATAAAGA--AAAAA-TGT---C-CACCC---T-ATGA-CTTTGATC-CCTCAGAT---TTGCAGCCTTTA---T-CG-ACTTTAGAA--G-TG--ACATCCGGCCTA-GCATGTCGCAC-TGGAAT-TCATAGAAGAGTTTGAAGTCGGTCTTGAGATTTTGC-ATGTAAACCAAATATCTGTCCATTCAAA-AACC--AT--TTC---TAGGCCAA--TTTCATAAT-
gi|10 : c-C-TA--GCCCCAC-GT--TATGGC--AAATAGAC---CTACTCTCTTTTCC-TGTTC-ATT-TCTTG---TAA-TC----CAATAA-TTC-CC-----GCAGTCTT-----GCCAA---TTAT-------T---GT-------GCATTCAGTTGGAATGGTT--GCACAGGAC-----TTCGTTGAA--ACACTATAATCAGC-T-ACTT-TCAT-CACAACAAA---TTCCCAC--CAT-----AGAGG---TATCGTTT-GATAAGAAATTAA--GGTAC-GCC-TGGTTCTAATT--GGTAGTGCT-T----TCCATATC--C--CAGATAT--ACTGAGACGC--C-CC--ATCTCGCGTAG-TT-CCTT-TG-TAAAGA--TA---CACA--T-GCTGTTAAG-CGCA-TGC-A-AATCG-A---GC--AAAGATTTCCAA-CTT-AAGCgccga
gi|11 : CTGAAACGT-CGTTATT--CAT-A-GGCTATAACCCTG-TTAATTCTATAACATTT---TTATAAGAAAACTGAGGCAAAA-ATAGTGCCACA--TATCAT-AAATAATA--T----ATATA-TAA-TGTTGCAAATT-AATACC-AAAATGGCTGTA--ATTGTTTTTTTTTTAAATGTGTG--GGTAGTATAA--CAGAAACAAAGAG-TAAACACA-AAAAACTGCATTCCAAAAACGGGTTTAGTTTTTA-AG-AA-AAAAAAAAAGT-ATGCAACGC--CTGATATATGCAG----AATA---AAGGAAAAGT-TAACTGCATCCCTTTAACAACCT
gi|12 : aGACCTT------C-----AAATTTTGCAGCCTTTGATTTTCGACCTGTAGAAGGGGTGATG-ATCCGGTCTACGCATGTT-CACCTGG-ACA-CATAGAA-GATGTT-G-T-GGTCTT-CGTTTTGGCTAT-TAA--CAAATTTGTG-CCATCA--A-AACCCGATTGTTTCC-TAGGACACTTTTTCAGAA
gi|13 : TT--CTATCCAAATCC-G-CG-GAACA----GTATT--AGAACCGAAAATCCCC-GCTTCTCTCTAT--A-TGT---CTTATAAACTTGGATC---TCCA-CAG---CATCGT---------CGT-----TTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTTAA------CAAGGCTTTTC---AAATGGTACT-TGCCTTCTG-AAGCAATTAA---------ATC-----AT---------------gtcccgaaggt
gi|14 : TACCCGGTCCC-GACT------------ATCAAATAAATC-------TAGTAGTAAGCATATGTTATATAGTGTA---------CGCTTTGTTCACACTT-AGACAAATAAAAT-GTTA--AAATG-TAAACAATAATT-ATCAATTGAGTA--CCTAAAGATGTTATTACATGTATCTCTTATCCATGTCgtc
gi|15 : CAGAACA--GCTGAAACGT-CGTTATG-TCAT-A-GGCTATAAC--TG-TTAATT-TATAACATTT---T-ATAAGAA
gi|16 : TAAA-CGCA-TAA-CATCATC-----CACCTGTG-ACCGTCCCATATGTCCGATGACCTTTCAAGCGTTagcagcag
gi|2 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATA--CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TCT--T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAA---CAA-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT-----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC---CAGAGTCCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GTT---TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--GAA-TTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-ATATAG---AG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-A-G-CTA--AC-----TCAATT-TATAAC--TT---T-ATAAGAAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TA--T----ATATA-TAAATTTTGTAAATA-AATACC-AAAATGGCTGTA--TTTG---CCTTTTAAAATG-GTGCTGA-AGTAT-A--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TG--G-ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGGtg
gi|3 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATA--CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TCT--T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAA---CAA-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT-----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC---CAGAGTCCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GTT---TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--GAA-TTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-ATATAG---AG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-A-G-CTA--AC-----TCAATT-TATAAC--TT---T-ATAAGAAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TA--T----ATATA-TAAATTTTGTAAATA-AATACC-AAAATGGCTGTA--TTTG---CCTTTTAAAATG-GTGCTGA-AGTAT-A--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TG--G-ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|4 : TCGTTACTCTAG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTT-G--TA-TTCAGTTTA-TTT-TCAGTGCGT-CTCTTCATCCACATCAA-GTAGGCCAAACATACGCTAAGTG-----GTTTCATTTGAAGACTT---GCGACCG-C-TA--GCCC-AC-GT--GATG-C--AAA---AC---ATA-TCTCTCT--C-TGGTC-ATT-TCTTG---TAA-AC----CAATA--CCC-CC-----GCAGTCTT------TGAATC-TTAT-------TCCAGTG------GCTTTTGGCT-------CT--GCA-GGGAC-----TTCGTTGAA-CAC-CTAT-----GT-T-ACTTCTTTT-CACAACAAA-ACTTCC--T--CAT-----A---A---TTTCG-TT-GA-AGGAAGTTAA--G---C-G-C-TG--TCT--T---GGTAGTGCT-T----TACATATC--C--TAGATAT--ACTG----GT--C-CC--ATCTCGCGTAG-TT-GTGT-TA-TCA--G--TA---CACA-GT-GCTGTTAAC-CA-A-GGC-A-CATCGCA---GCAAAAAGATTTCC-A-CTTGAAGCAGCCAA-----TCAC---CAGTT-CTCTGTGGCTCTTATGAAGC----TTAA---CAA-AGCT---CGA-C-ATTCTC-AT-GTAAGAATGCC----------AAATAATCAAAA-T-CTTAATCCTGCTAGCCATTTCAGAC-TCAAA--TTCG-TCCA---CAAATCCC-T-TCACCT---CTGACTTTGAATTC-TTGTCTGCCAA-TA-CTGGCAATGGATTCTT-GGATGTTCTTTCTTCCTATTTGACATAGAGG-CAAAACTGCCAAAATTCCAAAGTTCATAAATTTCATCATCTAGCGATGGCACGTCTAT-CTTACTTTTTTACGGCAGTCAATTCAAAGAA-TATATATC--C-TTTGAT--GCGCAAAAACCGCCTTAT--ATATCAG-CTTGT--CCCACGCACT--CTTTTTAATGGTACGCTTTT--CTATCCAAATCCAG-CGAGAACATGCAGTATT--AGGACCAAAAATCCCCCACTTCTATCCAT--ACTGT---CTTCTAAACCTGGATC---TCCAATAG---CATAGT--TTT-AT-CGT--GCGTTTTGTCT-GTGTTGGCCGTATTTCTTAGAAACTGAA------CAAGGCTTT-----AA--GG-ACTGTTCCTTCTGAAAGCAATTAA--------CATC-----AT---------------CTTAAA-CG-A-TAATCATCATC-----CAACTGTGGACCCTCCGATATGTCCGATGACTTTTTAAGCGTTGGTAGCATTATGCAAGAGA-------GTTTCGCT-TACTCCTCCAACCC--TTTGAAAAAACC-TT-CATTTTGG------CCAATC---CAGAGTCCGCT-TGACCTTCGCT----TTAC--AGTGTC-GCTGCCCTGA-AGATGACCCTTCTTCTGCAAATAGTTGTTTT--AC-AG--ATGTTTTGCCCTTCGTGAAACCTTTTTTCTCT--AGTGTTAAGGT------TAGT-A-GCCTTT--TAAAATACTACCCACTAAAATAACCGACACAT-ATTAT---A-CATGTAACAACAGCATATATGCTAC-TGTCTGACACAGTCA-TTACAATACCCGGTCCCCGACT------------A--------ATC-------TAA---------------ATATGG---A---------CACTTTGTTCACACTTTAGACAAATAAAAT-GTT---TAATGTTAAACAATAATTCAACAATTGACTA--CGTAAAGATGTTAT------TATCTCTTATCCATGTCACACTTC-CACAAAA-G-TTGCGAG-AAAAGTGTAAGTTTTAATT--GAA-TTAAGCGGCGATTTTCAAGCGCGCAAATGAC-GAGCTACATTTTTTA-AC-----GACA-CATTG-ATATAG---AG-----TATAAGGG-ACGGTAACCTGTCCGATAAATACCAATCGCGCGCAATTTAGC-TG--CTGATGTTTGTACAAT-ATACACTA-AAAGAGTAATTATTAAGTAGCAGAACAT-GCTAAAAC-T-CGTTATT-TCAT-A-G-CTA--AC-----TCAATT-TATAAC--TT---T-ATAAGAAG-CTG--GCAAAACATAGTGCCACAAATATCAT-AA----TA--T----ATATA-TAAATTTTGTAAATA-AATACC-AAAATGGCTGTA--TTTG---CCTTTTAAAATG-GTGCTGA-AGTAT-A--CAGAAAACAAGAGTTAAACAC--AAAAACTGCATT-CAAAAA-GG---TA------A-AGCAC-AAAAAAAAAGT-AT-CAACGC--TTGATTTAT--AG---AAATA---A--GAAAA-T-T---CGCACCC---TAATGACCTTTGACC-C-----AA---TTGCTGCCATTAATTT-CGAACATTAGAAGGG-TG--G-ATCC-GCCTA-GCATGTTTCACATGGGACATCATAGAAAGATGTG-GGT-GGTCTT-AGTTTTTGC-AT-TAA--CAAATTTTTG-CCATC---A-AACC--AT--TTTCTATAGGCCAC-TTTTCAGAAT-CGAGG
gi|5 : AATTGAGTA--CCTAAAGATGTTAT------TATCTCTTGTCCATGTCACATTTC-CACAAAACG-TTGCGAG-AAAGGTGTAG--TTTAACT--GAAATTAAGCG-TGATTTTCAAGCGCGCAAATGAC-GAGCTA---TTTTTA--------GACA-CATTG-GTATCATGCAG-----TATAAGGG-ACG-TAAC-TGTT-AATAAATGCTAATCGCGCGAAAGTTAGCGTA--CTGAT-TTTGTACAAT-ATGCACTA-GAAGAGTA-TTATGTAGTAGCAGAACA--GCTAAAACGT-CGTTATT-TCAT-AAG-CTA--AC--TG-TTAATT-TATAACATTT---T-ATAAGAAAACTG--GCAAAA-ATAGTGCCA-AAATATCAT-AAA---TAATC----ATATA-TAA-TTTTGCAAATATAATACC-AAA-TGGCTGTAA-TTTG---C-TTTTAAAATG-GTGCTGGTAGTAT-A--CAG-AAAC-AGAGTTAAACACAAAAAAACTGCATT-CTAAAA-GG---TA------AGAACA--AAAAAAAAAAT-ATGCAACGC--TTGATATATC-AGAATAAAGA---A--AAAAA-T------GCACCT-----ATGACCTTTGACCTC-----AAT--TTGCAGCCTT--ATTT-CG-ACCTTAGAAGGG-TG--ACATCCGGCCTA-GCATGT----CAT-GGACACCATAG-AAGATGTT-GTT-GGTCTT-AG-TTTTGC-AT-TAA--CAAA-TTTTG-CCATC---ATAACC--AT--TTTC--TAGGCCACTTTTTCAGAATCCGAGG
gi|6 : CGTTACT--AG-AT-TTTCCT-CATTT--TTAATACGT--GTTGGTTGG--TACTTCAGTTTA-TTT-TCAGTG-GT-CTCTTCATCATCATCAA-GTAGACCAAACA-ACG-TAAGT------GTTTCATTTGAA-ACTT---GCAACCGCC-TA--GCCT-AC-GT--GATG-C--AAA---AC---ATA-TTTCTTG--CTTGGTC-ATT-TCGTG---CAATAC----CAATAATCCC-CC-----GCAGTCTT-----GCAAATC-TTATTGATCAATTCAGTG------GCTT--GG-T-------CT--GCA-GGTAC-----TTCGTTGA---AC-CTAT-----GT-TCACTTCTTTT-CACAACAAACATTTCCA-C--CAT-----A---A---ATTCG-TT-GA-A-GAAGTTGG--G---C-G-C-AG--TCT--TT--GGTAGTGCT-T----T-CATATCCGC--TAGATAT--ACTG----GTCCC-CC--ATCTCGTGTAGTTT-GTGT-GA-TCA-----TA---CACA-GT-GCTGTTAAC-CA-A-GGCAA-CATCGCA---GC--AAAGATATCC-A-TGTCAAGCAGCCAA-----TT------------------GCTCTGATGAAGC----TTAA---CAAGAGCT---CGACC-ATTCTC-AT-GTACGAATGCC----------AAA-AAGCAAAATT-CTTAAT-CTGCTG--CATTTCAGAC-TCGAA--TTCG-CTCAG--CAAATCCT-T-ta
gi|7 : ctgctcCGTTTATCTAG-ATATTTCCTGCATTTGTTTAATACGTTGGTTGGTT-GGGTACTTCAGTTTAATTT-TCAGTG-GTGCTCTTCATCATCATCAA-GTAGACCAAACAAGCG-TAAGTGTCCTCGTTCGATTTG-AGACTTGTGGCGACGGCC-TAGGGCCCAACGGTGAGATG-CGAAGA---ACAAGATG-ATTCTTG--C-TTGTCGATTGTCTTGGGTTAA-ATGAAACAATAT-CCCGCCGGCGGGCAGTCCTGTTGGGCAAATCGTTATTTGA---TCCATTGCAGATTGCTT--GG-T-------CTGGGCA-GGGACCTTAGTTCGTTGGA--AC-CTAT-----GTAC-ATTTCTTTTGCACAAACAA-ACTTTC--C--CACGCATAA---A---TTTCG-TT----AAGAAGTTAAAGG---CGG-C-TG--TCT--TTGGGGTAGTCCTGTTGCATTCATATCCGC--TAGATATTAGCTG----GT--CGCC--ATCTCGCGTAG-TT-GTGTGTATTCA--T--TATCTTACAGGTGGCTGTTAACGCA-AGGGCAA-CATCGCAGGGGC-AAAAGATTTCC-A-C-TGAAGCgtac
gi|8 : ccg---TTTTG-TT-GA-AG-AAGTTGG--G---C-G-C-AG--TCT--TT--GGTAGTGCT-T----T-CATATC--CGCTAGATAT--ACTA----GT--C-CCCCATCTCGCGTAG-TTTGTGT-GA-TCA-----TG---CACA-GT-GCTGTTAAC-CA-A-GGC-AACATCGCA---GCAAA--GATTTCC-A-TGTGAAGCAGCTAA--------------------CTG---CTCTTTTGAAGC----TTAA---CAAGAGCT---CGA-CCATTCTC-AT-GTATGAATGCC----------AAA-AAGCAAAA-TTCTTAATC-TGCTG--CATTTCAGAC-TCAAA--TTCGCCCCG---CAAATCCC-T-GTACC----CTGACTTTGAAATC-TTGTCTGCCAA-TA-CT-GCATTTGATTCTT-GGATG----TTCTCCCTATTTGAC--AGAGG-CAAA--TGC--AAGTTCC-ATGTTCA-AAATTTCATCATCTAGCGATGGCACGTCTAT-CTT--CTTTTCAC-GCAGTCAA-TCAAAGAA--ATATATC--CATTTGAT--GCGCCACAA-CGCCTCAT--ACATCAG-TTTGTG-CCCACGCACT--GCTTTTA
gi|9 : TCAG-CTTGTG-CCCACGCACT--GCTTTTA----TAGGCTTT-----A-CCAAATCC-G-CG-GAACA----GTATT--AGGACCGAAAATTCCC-GCTTCTATCCAT--A-TGT---CTTCTAAACCTGGATC---TCCA-TAG---CATCGTCGTTT--T-CATAGGTGTTTTGTCT-GTGTTGGCCGTATTTCTTTGAAACTGAA------CAAGGCTTTTCA--AA--TG-GTATTTCCTTCTG-AAGCAATTAAATCATGTCTATCAGATAAT---------------CTTAAA-CGCA-TTA-CATCTTC-----CAACTGT-GACCGCTCGATTTGTCCGATGACTTTTCAAGCTTTTGTA-CATTATGCAAGATA-------GTTT-GCT-TAC-CCT-CAACCC--TCTGACAGAACA-TG-CATTTTGA------CCAATCAA-CAGGGT-CGCT-TGACCTGCGCT----TTAC--AGTGTC-GCTG-CCTGT-AGATGACCC