lowQualScore : 111111111111111111111 1111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 11111111111111 111111111 1111111111111111111111111111111 111111111111111111111111111111 44444444444444444444444444444444444 222222222222222222 1111111111111111111111111111 222222222222222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 111111111111111111111111111111 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 111111111111111111111111111111 55555555555555555555555555555555555555555555555555555555555555555555 1111111111111111111111
lowQualScore : 444 1 4 111111111111111111111 9999999999999999999 3333333333333333333333 4 1 1 444444444444444444444444444444444444444444444444444444444444444444 1 1 55 4 1 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1 4 1 33333333333333 4 22 44 111111111 1 1 4 2222 888888888888888 1 4 1 1 333 444 1 1 22 444 1 55 1 11 1 222 1 5555555555555555555555555555555 4 444 1 4 22 55 1 55 1 333 888888888888888888888888888888 11 66666666 33333333333333333333333333333333333 1 55 44444 1 4 444444 1 4 22 4 22222 333 111 222222222 4 55 444444444444444444 2 1 11 2 1 1 2222222 2222222 1 1 1 4444444444444444444 1 1 5555555555555555555555555555 11 333 333333333333333333333333333333333333333333333333333333333 1 222 7777777777777777777 333 111 4 333 2 11111111111111111111111111111111111111111111111111111111111111111111 4 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1 111 1 44 111111111111111111111111111111 11 6666666666666666 666 1 11 4444444444 11111 11 1 6666666666666666666666666666 4444 1 5555555 33 222 11 1 1 11 333333333 22222 1 6666666666666666 222 44 777 44 1 1 1 222 22 22222 22 11111 2222 1 222 1111111 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11 1 2 111 333 22 222222222222222222222222222222 11 8888888888888888888 33333333333 11 55 1 1 2 2 1 333 1 11 22222222222222222222222222222222222222222222222222222222222222222222 1 5555555 1 1 1111 4 4 2222222222222222222222
lowQualScore : 888 6 5 0 6 333333333333333333333 4444444444444444444 7777777777777777777777 0 6 6 6 6 5 7 666666666666666666666666666666666666666666666666666666666666666666 5 5 6 55 0 7 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 7 6 0 7 99999999999999 6 6 0 11 6 66 222222222 5 6 7 0 6 8888 2 444444444444444 2 4 5 6 0 5 5 4 111 555 2 5 0 77 4 66 55 666 5 6 6 55 7 6 6 22 6 5 6 999 6 6 7 3333333333333333333333333333333 0 666 5 6 6 0 6 11 6 6 6 77 7 55 5 000 111111111111111111111111111111 6 22 6 33333333 6 00000000000000000000000000000000000 6 6 7 55 6 22222 6 7 6 0 888888 6 6 7 0 77 0 6 2 33333 4 555 2 555 2 555555555 6 0 6 55 777777777777777777 2 6 0 2 22 4 4 0 2 3 4444444 3 9999999 4 3 4 2 1 7 7 7777777777777777777 4 3 2 4 7 2 5 6 2 3 4444444444444444444444444444 88 555 3 2 3 222222222222222222222222222222222222222222222222222222222 3 1 111 6 0 6666666666666666666 6 888 6 6 2 777 0 333 4 3 33333333333333333333333333333333333333333333333333333333333333333333 0 6 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 0 777 0 7 3 00 8 555555555555555555555555555555 7 6 9 77 0000000000000000 4 111 0 11 1111111111 4 6 44 99999 22 3 6 9 2222222222222222222222222222 6 66 2222 3 2 1 2 3333333 33 666 444 999 0 00 7 0 2 0 00 999999999 66666 2 1111111111111111 111 6 66 6 000 6 6 6 6 66 6 6 6 5 7 3 6 0 999 4 3 2 77 88 2 888 3 55555 77 77777 6 6 9 7777 3 333 0 8888888 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 888 3 33 5 0 3 4 999 4 555 11 222222222222222222222222222222 11 6666666666666666666 7 77777777777 6 22 55 6 5 6 7 0 0 4 5 2 333 5 88 3 6 11111111111111111111111111111111111111111111111111111111111111111111 5 0000000 5 7 8888 0 0 6 5555555555555555555555 6
lowQualScore : ... . . . . ..................... ................... ...................... . . . . . . . .................................................................. . . . .. . . ................................................................................................................................................................................................................................................................................................................................................................................................ . . . . .............. . . . .. . .. ......... . . . . . .... . ............... . . . . . . . . ... ... . . . .. . .. .. ... . . . .. . . . .. . . . ... . . . ............................... . ... . . . . . .. . . . .. . .. . ... .............................. . .. . ........ . ................................... . . . .. . ..... . . . . ...... . . . . .. . . . ..... . ... . ... . ......... . . . .. .................. . . . . .. . . . . . ....... . ....... . . . . . . . ................... . . . . . . . . . . ............................ .. ... . . . ......................................................... . . ... . . ................... . ... . . . ... . ... . . .................................................................... . . ................................................................................................................................................................. . ... . . . .. . .............................. . . . .. ................ . ... . .. .......... . . .. ..... .. . . . ............................ . .. .... . . . . ....... .. ... ... ... . .. . . . . .. ......... ..... . ................ ... . .. . ... . . . . .. . . . . . . . . ... . . . .. .. . ... . ..... .. ..... . . . .... . ... . ....... ................................................................................................................................ ... . .. . . . . ... . ... .. .............................. .. ................... . ........... . .. .. . . . . . . . . . ... . .. . . .................................................................... . ....... . . .... . . . ...................... .
lowQualScore : 000 0 0 0 0 000000000000000000000 0000000000000000000 0000000000000000000000 0 0 0 0 0 0 0 000000000000000000000000000000000000000000000000000000000000000000 0 0 0 00 0 0 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 0 0 0 00000000000000 0 0 0 00 0 00 000000000 0 0 0 0 0 0000 5 000000000000000 5 0 5 0 0 5 5 0 000 000 5 0 5 00 0 00 55 000 0 0 0 00 0 0 0 00 0 0 0 000 0 0 0 0000000000000000000000000000000 0 000 0 0 0 0 0 00 0 0 0 00 0 00 0 000 555555555555555555555555555555 0 00 0 00000000 0 00000000000000000000000000000000000 0 0 0 00 0 00000 0 0 0 0 000000 0 0 0 0 55 0 0 5 55555 0 000 5 555 5 555555555 0 0 0 00 000000000000000000 5 7 3 0 77 0 0 7 3 3 0000000 7 7777777 7 7 0 3 0 3 3 0000000000000000000 0 0 5 0 0 5 0 0 5 0 0000000000000000000000000000 55 000 0 5 0 000000000000000000000000000000000000000000000000000000000 3 0 333 7 7 7777777777777777777 0 000 0 0 5 000 0 555 0 0 00000000000000000000000000000000000000000000000000000000000000000000 0 0 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 000 7 3 3 77 3 777777777777777777777777777777 3 7 0 55 5555555555555555 0 000 5 33 7777777777 7 0 77 33333 77 3 7 0 3333333333333333333333333333 0 55 5555 0 5 5 5 5555555 77 333 333 333 7 77 0 0 5 0 00 000000000 33333 3 8888888888888888 000 0 00 0 000 0 0 0 0 00 0 0 0 0 0 0 0 5 555 0 0 5 55 55 5 555 0 00000 55 55555 0 0 0 0000 3 333 7 0000000 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 555 0 00 5 0 0 0 000 0 000 77 000000000000000000000000000000 33 0000000000000000000 3 33333333333 0 00 00 0 0 0 0 0 0 0 5 5 555 0 55 0 0 00000000000000000000000000000000000000000000000000000000000000000000 0 0000000 0 0 0000 0 0 0 0000000000000000000000 0
consensus : GATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAGGTGTACTGNCAAGTGGAAATGAAGGCAGAAGACGGGGCCNAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTTTGGGNTGTTGCAATGCGCCAGCGA-CNTTTCGAGCGACTNGTGGANNCNGTCNTANNCGGCCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTNNNNNNNNNNNNNNNNNNNNNNNNNATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCCTGAGACCTTTGCAGTTACTATCGTCGATTTATCAG------TTACTATGGTAGCCAAATCACTG-CACAAATTAACTCACAAAAATATGAAGTATGTTTGAAC--AAGA-------------------------GAATAACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAGNCANGNCAAAAGNATTGTNTGCGACCNGTAAAGGNCACTTATGTTAAACACTTT-CGACATTA--TCTTTA--------------CAA-TNAGAACAGATCATA-CTCATTGCGTTGGCTTCCGAACTTNAAGAATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAGACGCTAGCAACGTTNCGATNTNANAACTGAAACACAAACC-AGG--NTNTCGACATTA-TAACGCAGNTGCNCTCANCNGGAAAACGTGCAAGAAGTGTATGNTCATGCCCGAGTACAACGANGNAAGTAGCACAACAGCNACTGTTCAGGGGTGTACATGCAGCACTTTGGAAATGACTCCTGTTGACGNCNTCGCAGAAGAGATCGAG--------------------AGAAA---------A-C--------------GACG-TCGAAATCAAGCAAAGTAACGAGTCGGTTGGAACGAAAGGTGAG-----AACC-GAA--GC-CTGGAATTATCGTCGGGAGAGACCGATGCTGAAGTNTCTGNNNTC-CCAGAGATCACNTTTGGGGGTGAAGGNCCAGGGTNTNCGCCCNTTCAGACGATGGGCTGA-AAAAGANAGATCC-ATCCNCCAGGCTGCTTTGCTGTGCCTTT-CAGTGAGGGACGACATGTACTCAATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATACTCTATTGGCCTGGGNTAN-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-------------TGTNAGNNNTGCATAAAATCAAA-GAGCC-CGAACAAATCTCTAA-AGTTCCAA-TGTA-GCTCATGTGATCTGGAATACCTATGGAACACGTAGGCGATGGGATNNTGCNTGGCAAAGGACNCCCGCGCAC--CGACANAAACGANCGATATA-TCTT-GGT-GTNTCTGATTATTTCACCGAATGGGTCGAG-G-CATTTGTTATGCCAAATAT-GGAAGNAGCAACAGTGGCGGATANAGTCTGC-AAAAAG-------TTGTTGCAAGGTTTGGAGTTCNNTGCGTCATAATTACGCGCGNACCGAGGGAAGCGATTTGAAGGCAAATTATTNANAGAATTGTG-ACAAAGTTCTGGNTATTGANAAAAACTCGTAC-GAA-CGCCCT-ACCATCCCCAATCAGA--GGC-ATGG--TG-GAGCGGTTCAATAAGA--CTTC-GCTNATTCAAATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCATCCT-GATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGANGAAANGTANCNACTCCNCTNGANGTCATGTGTACGAAATGNCNNNTNCGACNAGGAACCTGTTCCNNNANACCAATGGGTATGGGAATTG-AA-GAG-AAGCT---AAAAGC-TGT-TCACAGC--TGT--G----CACGCAG-----GCTACG-TG-GACAAAAGTCTC--CA-GACA-AGAAACTNTACTGGC--AATCATT--AA-CCG-TGACGAAGTNTATGTCTATTCCCCCANGNACCAAAACTGGGNAGCCNCCGGANNTCACACAGCTATTGGNGNGGNCNATNTCAGGCCGTCGAG-CAAAACTGT--GAT--GAC-TACAAANTT---G--TGTGGTTCANAGGGT---T--TCGG-TTATCCA-CGTGGACAGAATGCG-CT--AAAGGAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAGAAAAACTCNAATGATTCGATACCAGAAGAGCAATAGATCNAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
Reference ( gi|1 ) : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTC-GG-GTACTGGCAAGTGGAAG---AGGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTT-AGGTAATGCCATTTTGGGTTA-T-CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACCT-CTTCTGTAA--GAGCTTCGATCGTTCTTG-G-CCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAA-AATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACGCA-GTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAGCATA--TGCAAGTCGA-CCCTCTCCAAAGCATAACAAAAGTA---TGTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCATAGCTCATTGCGCTGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAATGTTTTGATATGAAAATTAAAGCACAGACC-AGG--ATCTCGACACCG-TAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAAT------GCCGCTGTT---GG-------TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGAG---GAG--------------------AGAAA---------ATC--------------GATG-TTGAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGAG-----AACCAGAATAGC-CTGGAATTGTCGTCGGG-G-GACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGAC---GATCTAT-CT-GT--AGACGATGA-CTGATAAAGGAGGGATCCCAACCTCCA---TGCT--ATTGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGTA-----AAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATATA-------AGCCGGT-------------TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAGAGCACCAAATGCAAGCTCGTGGGG-CTGGAATACCTATGGAACGCATAGGCAATGG-ATATTGTTTGG---GGAACTCCCGCGCACGCTGACAGAAACAACAGATATA-TCTTTAGTTGTTTCTGATTATTTTACCAAATGGGTCGAG-G-CATTTGCGATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCAAAAAAG-------TTGTTGCAAGGTTTGGGGTTCCATGTGTCA----TACATTCGGACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTG-GCAAAGTATTGAACATTAATAAGAACCCGTAC-GAA-CGCCCT-ACCATCCCCAATCAGAACGGC-ATGG--TATGAGCGATTCAATAAGA--CTTTTGCTA--TC-AATGCTTCGTAACTTGGTGA-CGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCA--TGTACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AA-GAG-AAGCT---AGAAAC-TGC-TCACATCTTTGTAAGGCAGCACACAACACAAGCTATGTTGAGACAGAAGACTTTGCACGACGCAGAAACTCTATTGGC--AATCATTC-ATCCCGGTGATGAAGTTTATGTGTACTTTCCCAGGTATCAGT-CTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTGAGGCAAAACTATATGATTTAACTTACAAAGTT---AGATGTGGTTCAAAGGGTAA-T-ATCAAGTTATACAGTGTGGACAGAATGCGTCTCAAAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAG-AAA-CTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|4 : GATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTC-AGTGTACTGTTAAGTGG---------CA----ATGGGGCCTAGATAGCATTCATAACCAAACATAGTCTG-TTCCAGTTTAAGGTAATGTTA-TTTGGGTTATT-CAATGTACCAGCGA
gi|14 : CTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTTtattcaaatgaaggcttttg
gi|15 : ATGCCATTT-GGGATG-TGCAATGCGTCAGCCA--CTTTCGAGCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|8 : AGCGA-CATTTGAA-CGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATT
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTTA-GACCTTTG---------------------CAG------TTACTATGGTAGCCAAATCACTG-CACAAATTAACTCACAAAAATATGAAGTATGTTTGAAC--AAGA-------------------------GAATAACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAA---TTT-CTATCAGT---GGTCACTTATGTTAAACACTTT-CGACATTA--TCTTTA--------------CAA-TGAGAACAGATCATCACTTATTGCGTTGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAATG-GTCAATATAACAATTGAA-CACCAACA-CGGCCGTCT-GACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTT---GGGTGTACATGTAGCAC--TGGAAATGACT---GTTGATGACGTAGCAGAAGAG---GAGAGACCCCCTATCTGTTCTTCAGAAA---------AAC--------------GATG-TTGAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAAAAC-CTGGAAT
gi|18 : ATCGTTCCTGAG-TCTTTGCAGTTACTATCGTCGATTTATCA
gi|16 : TA--CGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|10 : TCAAAACAGACCATACCTCATTGGTATGACTTCCAAGATTTAAGAACCC-GGAGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAAC-TTGTGATTTCAGTA-TAGAACACAAACCTAGG--A-GTTAACATTA-TAACGCAG
gi|3 : AACCGAT-ATA-CT-ATTGCATTGGTTT-TGAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAATATTCAG-TGTGAAAACTGACACACA-ACC-ACA--CTTTCGATATAA-TAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGC------ACAA--ATTCAGGG-------TACAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGT-------------------AGAAACACTTTCAGATCTCCAGGGAAAAAGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC-------C-CTGGATTTATCATCGGG-AAGACCGATGCTGAAGTCTCTGTGCTC-CCAAA-ATCACTTTTGGGGGTAAAGGGT---GATCTGC-CCCGT--AGACAATGAACTGA-AAAAGACAGATCC-ATCCTCTAAGTTACTTTACTGTGCCTTT-CAGTGAGAGACAACATGTACTCAAT
gi|2 : AG--------------------ATAAA---------A----------------GACG-TCGAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGAG-----AAC-AGAA--GCTCTGGAATTATTGTCGGAAG-GATCGATGCTGAAGTATCTGACATC-CCAGAGA-TATATTT-GAGGTGAAGGCCCAGGGTGTTTGCT-TTTCAGATGATGGGCTGA------AGAGATCC-ATCCACCAGACTGCT--GCTGTGCCTTT-CAATGAGGGACGACAT-------ATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATAA-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-------------TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACT-------------ATGAAAGCTC-------C---AACA------AAGTTCGTAGGAGATGGGATACTATTTAGCAAAGGACACCCGCGCAC--CGACAAAAACGTAAGATATA--ATTTAGTTGTTTCTGATTATTTCACCAAATGGGTCGAG-GGCATTTGTTAGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGTT-GCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCA----TACGCTTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAA--ATGCACAATGCTCTGGTTATTA-TAAAGACCCTTATAGGA-CGCCCTTACCATTGCCTATCAGA-TGGG-ATGG--TG-GAGCGATTCAATAAGA--CATC-GCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCATCCT-GATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAA-AAG-AGGCT---AGAAGC-TGT-TAACAGC--TGT-------------------GCTACG-----ACAGAAGTCT------GAT-CAGAAACTCTACTGAC--AGTCATTCAAACCCGTTGACGAAGTTTattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : cccATTCTATTGGCCTGGGCTAC-AAAGAAATGNNNNNNN-NNNNN-------NNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCTAAGAGTTCCAA-TGTA-GATCATGTGATCTGGAATACCTATGGAACACAT
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatTGTATAAAATAAAT-GAGCC-TGAACAAATTTCTAATAGTTCCAA-TGTA-GCTCATGTGATCTGGAATACCTATGGAACACATAG-CAATGG-ATCATGCA-GA---AGAACTCCCACGCAC--CAACATAAACAATCGATATAATCT------GTCTCTGATTGATTCACTGAATGGGTCGAG-G-CATTTGTTATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--AAAAG-------TTGTTGCAAGATTTGGAGTTCATTATGTCATAATTATATGCATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAATTGT--ACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-A-CGCCCT-TCCACCCCTAATTAGAncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|11 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaAACTGATACA-TCTT-GGTAGGATCAGATCATTTCACTCGATGTTCCGAGTG-T-TTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG--AACAAG-------TTATTACACGGTTTGGAGTt
gi|12 : -GCAAAGT--TGGGTATAGAAAAAAACTCGCAT-GAA-T-CCGT-ACCATCCCCAATC------GC-ATGACTTGTGAGCGGTTCAATTGCA--CT----CTAATTCAAATGCTT
gi|2 : gt-GAATCGCTCC-ACCATCCC--ATCTGATAGGCAATGG--TAAGGGCG-TCCTATAAGGGTCTTT
gi|7 : cccagataaaagacgtcgaaatcagcaaagtaatgtgtcggttggaataaaaggtgagaacagaagctctggaattattgtcggaaggatcgatgctgaagtatctgacatcccagagatatatttgaggtgaaggcccagggtgtttgcttttcagatgatgggctgaagagatccatccaccagactgctgctgtgcctttcaatgagggacgacatattaccgcaggtcacctcggagtgacaaaaactttacgcagaatacaaaaaaataaaaaaaatacgcagaataaaaagaaatgtcagatacatgtagtaataaaggcggttgtaagtgcagcatgaaatcaaagaacccgaacaaaactatgaaagctccaacaaagttcgtaggagatgggatactatttagcaaaggacacccgcgcaccgacaaaaacgtaagatataatttagttgtttctgattatttcaccaaatgggtcgagggcatttgttagaccaaatatggaagcagcagcagtggtggatacagttgcaaaaaaaaaaaaaattgttgcaaggtttggagttccatgcgtcatacgcttggaccaagggaagcgatttaaaggcaaattattcaaagaaatgcacaatgctctggttattatGACGAAATGTATCTACTCCATTGGATATCA--TGTATGAAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAG-GAGCAAGCTCACAAAAGCGTTCGTCAAAA---TG-AAG--AGCATGCAA---------TGGTAAGACAAAAGCATTACCATGACA-AAAGATTGAATTGGGGGAA-CTTTA-AAGTTAATGATGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCAAG--AAAA-TGTCAGATGTGACATATCATGTTGTCAATTGTGGTTCACAGGGTTC-TAATCGGGTAATCCA-CGTGGATAGAATGCGGCT--AAAGaataagacatcgctctcaatgcttcggaccttgatgaatgagaattagaactgggacgagctcttcccgttcatcctgatggtatacagatctgtagaacaggaaactacaggatctagtccaaacaatctcatgtttggaagaaaagtaacaacttctcttgaggttatgtgtaccaaatgcccaattcaacaaggaacgttcccacataccaatgaatatgggatttgaaaaagaggctagaagctgttaacagctgtgctacgacagaagtctgatcagaaactctactgacagtcattcaaacccgttgacgaagttt
gi|6 : TGGGTATGGGGATTG-AAAGAG-AAGCT---AAAAGT-TGT-CCACAGCTTTGT--GAC--TACATAGCACAAGCTATGCTGCGACAAAAGTCTCTGCAAGACA-AGAAACTATACTGGC--AATCATT-------------GAAGTCTAT------TCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTGGCAAAACTGT-------------CAAATTT-----ATGTGGTTCAA--GGT-----------TTAC---GTGTGGACAG-------------AGAAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAGAAAA-CTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAAc
gi|13 : CCGTTGA--CGAAGTT-TACAATTAAATTTA-AAACTT---G--TGTGGTTTAGAGGGTAAAT-CTCAGTTTATCCATTTTGT-CAGAATGCGTTTTAAAAGGAG
gi|17 : TTGAAAAAG-AAAATTCTAATGATTTGATACCAGA--AGCAATAGATCAAg
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|9 ): ATGGGTGTGACAATTGCAAGATAGACTTGAGCAAGCTCACAAAATTGTTCGTCAAAATGCAGTGGTAAGACAAAAGCATTACCATGACAAAAATTGAATTGAGGGAACTTTAATGTAAATTATGAGGTGTATGTCTATTTTCCACGAACCAAAACGGGACAGTCGCCAAAATTTACTAGCTATTGCAG
Alignments
lowQualScore : 1111111111111111111111111 111111111111 22222222222222222222222222 11111111111111 1111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111 11111111111111111111111111111111111111111111111111111111 11111111111111111 11111111111111111111111111111111111111111111111
lowQualScore : 2 2 22 2 2 2 22 2 333 2 1 2222 2222 11 2 333 1 11 333 11 2 222 22 2 2 22 333 5555555555555555555555555 22 2 2 22 2 2 11 333 55555 22 22 55555 44444444 22 6666666 000000000000 2 3333333333 1 3333333333 1 555555 222 2 1 22222 1 1 222 222222222222222 1 33 111 1 1 22 55555 55555 1 2 2 2222222222222222222222222 11 11 2222 99999999999999 11 2 00000000000000000000000000 22 2 1 11 2 11 222 11 2 22 11111111111111 1 111 1 1 11 1 111 2 1 1 1 1 777777777777777777777777777777 333 5555555555555555555555555555555555555555555555555555555555555555555 222222 3333333 1 3333 1 1 666666666666666666 11111 1 111 222 1 1 66666666666666666666 2 1 3333333333333 111 11 1 2222222 33333 1 1 2222 1 11 1 3333333333 3333333 11 1 33333333 1 22222 1 555555555 33333333333 1 22 1 1 1 22 33333 3333333333333 1 333 2 111 333 2 222 77777777777777777777777777777777777777777777777777777777 66666666666666 1111111111111111 77777777777777777777 1 11111111 1 1 333 222 11111111111111111 33333333 66666666666666666666666666666 44444444 22 2 11 555555 99999999999999999999999999999999999999999999999 1 1 2 2 1 4444 11
lowQualScore : 4 0 3 0 77 0 0 0 77 0 4 555 0 5 1111 4444 88 0 2 4 555 3 5 2 88 2 2 555 2 88 4 0 000 2 3 77 0 4 0 3 77 555 2 4 2 7777777777777777777777777 3 77 0 0 77 0 0 3 4 2 4 88 555 00000 77 4 77 00000 3 2 22222222 4 3 2 3 77 5555555 2 222222222222 2 2 0 9999999999 5 4444444444 4 5 4 777777 000 0 2 5 66666 5 3 4 5 0 000 1 666666666666666 0 1 7 5 7 7 1 0 88 0 444 5 11 22 1 88 22 0 5 3 2 77 4 2 4 4 77 00000 2 3 00000 5 2 0 2 0 2 5555555555555555555555555 99 4 88 2 0 4444 6 4 55555555555555 88 0 77777777777777777777777777 4 77 0 3 4 5 88 4 0 88 0 0 7 11 9999 1 111 1 00 11 7 11 4 0 77 77777777777777 3 1 2 111 0 6 2 0 44 1 3 0 777 77 0 88 0 1 1 1 0 7 3 0 999 0 0 7 2 1 1 1 1 0 1 0 0 0 1 1 0 555555555555555555555555555555 7 777 1 1 888 1111111111111111111111111111111111111111111111111111111111111111111 999 6 2 2 777777 7777777 0 0 0000 1 333 3 2 6 1 6 1 333333333333333333 6 0 44444 1 3 1 999 777 3 0 2 22222222222222222222 0 5 3333333333333 3 111 6 1 44 0 4444444 2 33333 1 333 3 0 0 4 2 5555 0 11 0 5 33 3 2 0 7777777777 6 22 0000000 0 1 88 1 0 77 0 66666666 1 4 0 2 55555 0 1 1 99 1 99 222222222 3 22 0 33333333333 1 0 0 0 1 1 6 22 6 1 9 1 3 0 7 2 0 3 33 11111 0 9999999999999 2 2 5 555 0 2 4 1 1 1 1 1 1 1 7 222 1 333 1 0 1 6 111 333 1 0 4 8 8 555 8 0 8 66666666666666666666666666666666666666666666666666666666 11111111111111 8 3 22 5555555555555555 55555555555555555555 3 44 5 1 11111111 33 2 1 44 22 5 5 1 1 1 1 1 777 6 0 222 6 6 00000000000000000 1 66666666 44 55555555555555555555555555555 3 44444444 0 77 2 4 3 7 1 7 0 44 6 7 1 777777 66666666666666666666666666666666666666666666666 2 5 5 2 4 2 0 0 5 88 2222 88
lowQualScore : . . . . .. . . . .. . . ... . . .... .... .. . . . ... . . . .. . . ... . .. . . ... . . .. . . . . .. ... . . . ......................... . .. . . .. . . . . . . .. ... ..... .. . .. ..... . . ........ . . . . .. ....... . ............ . . . .......... . .......... . . . ...... ... . . . ..... . . . . . ... . ............... . . . . . . . . .. . ... . .. .. . .. .. . . . . .. . . . . .. ..... . . ..... . . . . . . ......................... .. . .. . . .... . . .............. .. . .......................... . .. . . . . .. . . .. . . . .. .... . ... . .. .. . .. . . .. .............. . . . ... . . . . .. . . . ... .. . .. . . . . . . . . ... . . . . . . . . . . . . . . . . .............................. . ... . . ... ................................................................... ... . . . ...... ....... . . .... . ... . . . . . . .................. . . ..... . . . ... ... . . . .................... . . ............. . ... . . .. . ....... . ..... . ... . . . . . .... . .. . . .. . . . .......... . .. ....... . . .. . . .. . ........ . . . . ..... . . . .. . .. ......... . .. . ........... . . . . . . . .. . . . . . . . . . . .. ..... . ............. . . . ... . . . . . . . . . . . ... . ... . . . . ... ... . . . . . ... . . . ........................................................ .............. . . .. ................ .................... . .. . . ........ .. . . .. .. . . . . . . . ... . . ... . . ................. . ........ .. ............................. . ........ . .. . . . . . . . .. . . . ...... ............................................... . . . . . . . . . .. .... ..
lowQualScore : 0 0 0 0 55 0 0 0 55 0 0 000 0 5 0000 5555 00 0 5 0 000 0 0 5 00 5 5 000 5 00 0 0 555 5 0 55 0 0 0 0 55 000 5 0 5 0000000000000000000000000 0 55 0 0 55 0 0 0 0 5 0 00 000 00000 55 0 55 00000 0 5 55555555 0 0 5 0 55 0000000 5 555555555555 5 5 0 5555555555 5 0000000000 0 5 0 555555 555 0 5 5 00000 0 0 0 5 7 777 0 000000000000000 7 0 3 5 3 3 0 7 77 7 888 0 77 00 0 33 00 7 0 0 5 55 0 5 0 0 00 00000 5 0 00000 0 5 0 5 0 5 0000000000000000000000000 55 0 55 5 7 7777 7 0 55555555555555 55 0 55555555555555555555555555 0 55 0 0 0 0 55 0 0 00 7 7 3 77 3333 0 333 0 33 77 3 77 0 0 55 55555555555555 3 0 5 000 0 5 5 0 88 0 2 0 555 55 2 55 5 0 0 0 5 0 2 0 000 0 0 2 0 0 0 0 0 7 0 7 7 7 0 0 7 777777777777777777777777777777 3 000 0 0 000 6666666666666666666666666666666666666666666666666666666666666666666 000 5 0 0 555555 0000000 2 0 0000 0 000 3 0 7 0 7 0 777777777777777777 7 7 77777 0 3 0 333 000 3 7 0 55555555555555555555 0 0 0000000000000 0 777 7 0 33 3 3333333 0 33333 0 000 2 0 0 0 5 8888 0 22 2 5 88 2 5 8 9999999999 7 00 0000000 7 0 33 0 7 55 0 88888888 0 2 0 5 00000 0 0 2 00 0 88 888888888 2 00 7 77777777777 0 7 7 7 0 0 0 00 5 0 0 0 2 0 0 5 0 2 88 33333 7 7777777777777 5 5 5 000 0 5 0 0 0 0 0 0 0 0 3 333 0 000 0 7 0 7 000 000 0 7 0 0 0 000 0 8 0 00000000000000000000000000000000000000000000000000000000 22222222222222 0 2 44 4444444444444444 22222222222222222222 8 00 0 0 22222222 00 0 0 00 00 5 5 0 0 0 0 0 000 0 7 777 7 7 77777777777777777 0 88888888 22 22222222222222222222222222222 2 88888888 7 55 5 0 7 3 0 3 7 77 7 3 0 555555 55555555555555555555555555555555555555555555555 5 5 0 5 0 5 0 0 0 00 5555 55
consensus : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATG-AGGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTTTGGGTTAT--CAATGCGCCAGCGA-CATTT-GAGCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTT-AGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAATGTT-CGATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACAA--GCCGCTGTT---GGGTGT---TGCAGCACTTTGGAAATGA---CTGTTGACGACGTAATAGAAGAG---GAG-AG---------------------AAA-A-C-----GATGTC-------------------GAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGA-----GAACC-G--A--AGC-CTGGAATTATCGTCGGGAGGGACCGATGCTGAAGTCTCTGTGNTC-CCAGAGATCACTTTTGGGGGTGAAGGNC---GATCTNC-CCCGT--AGACGATGGACTGA-AAAGGAGAGAT-CCATCCTCCAGGCTGCT-TGCTGTGCC-TTTCAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTA-NAAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAA-AGCTCC-AACGT-AGCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAAT-GGATANTGTTTGG-GAAGAACTCCCGCGCA--CCGACANAAACGACNGATATA-TCTT--GG-T-GTTTCTGATTATTTCACCGAATGGGTCGA-GGCATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCA-------AAAAAGTTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATTACGC-CGGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTGACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCC-TACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGAC-TTCGCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCGAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGCAA-GAG-AAGCT---AG-AAGCTGTTCA-CA----G--C--T--GT---G----C--CA-A--A---CGCA--G-GCTACG-T--A-GACAAAAG--TNTTACC---ACGACG-AGAAACTNTATTG--GC--AA--TCA---TT-AA--TC---G-TGA----TGAAGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-A-GCAAAACTGT---A--TGA------C-TACAAANTT--G-----TGTGGTTCAAAGGG----T----T----TCGG-TT-ATCCA-CGTGGACAGAATGC-G-CTC--AAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAG-AAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Reference ( family-1193 ) : GATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAGGTGTACTGNCAAGTGGAAATGAAGGCAGAAGACGGGGCCNAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTTTGGGNTGTTGCAATGCGCCAGCGA-CNTTTCGAGCGACTNGTGGANNCNGTCNTANNCGGCCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTNNNNNNNNNNNNNNNNNNNNNNNNNATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCCTGAGACCTTTGCAGTTACTATCGTCGATTTATCAG------TTACTATGGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAGNCANGNCAAAAGNATTGTNTGCGACCNGTAAAGGNCACTTATGTTAAACAC-TTTCGACATT--ATC--------------TTTACAA-TNAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTCCGAACTTNAAGAATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAGACGCTAGCAACGTTNCGATNTNANAACTGAAACACAAACC-AGGNTNTC-GAC-ATTATAACGCAGNTGCNCTCANCNGGAAAACGTGCAAGAAGTGTATGNTCATGCCCGAGTACAACGANGNAAGTAGCACAACAGCNACTGTTCAGGGGTGTACATGCAGCACTTTGGAAATGACTCCTGTTGACGNCNTCGCAGAAGAGATCGAG-AG---------------------AAA-A-C-----GACGTC-------------------GAAATCAAGCAAAGTAACGAGTCGGTTGGAACGAAAGGTGA-----GAACC-G--A--AGC-CTGGAATTATCGTCGGGAGAGACCGATGCTGAAGTNTCTGNNNTC-CCAGAGATCACNTTTGGGGGTGAAGGNCCAGGGTNTNCGCCCNTTCAGACGATGGGCTGA-AAAAGANAGAT-CCATCCNCCAGGCTGCTTTGCTGTGCC-TTTCAGTGAGGGACGACATGTACTCAATT--------------------ACCGC-AGGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATACTCTATTGGCCTGGGNTA-NAAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTNAGNNNTGCATAAAATCAAA-GAGCC-CGAACAAATCTCT-AA-AGTTCC-AATGT-AGCTCATGTGATCTGGAATACCTATGGAACACGTAGGCGATGGGATNNTGCNTGGCAAAGGACNCCCGCGCA--CCGACANAAACGANCGATATA-TCTT--GG-T-GTNTCTGATTATTTCACCGAATGGGTCGA-GGCATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACAGTGGCGGATANAGTCTGC--------AAAAAGTTGTTGCAAGGTTTGGAGTTCNNTGCGTCATA-ATTACGCGCGNACCGAGGGAAGCGATTTGAAGGCAAATTATTNANAGAATTGTGACAAAGTTCTGGNTATTGANAAAAACTCGTAC-GAACGCCC-TACCATCCCCAATCAGA--GGCATGG--TG-GAGCGGTTCAATAAGAC-TTCGCTNATTCAAATGCTTCGGACCTTGATGAATGAGAATT---AGAACTGGGACGAGCTCTTCCCGTTCA-TCCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGANGAAANGTANCNACTCCNCTNGANGTCATGTGTACGAAATGNCNNNTNCGACNAGGAACCTGTTCCNNNANACCAATGGGTATGGGAATTG-AA-GAG-AAGCT---AA-AAGCTGTTCA-CA----G--C--T--GT---G----C--------A---CGCA--G-GCTACG-T--G-GACAAAAG--TCT--CC---A-GACA-AGAAACTNTACTG--GC--AA--TCA---TT-AA--CC---G-TGA----CGAAGTNTATGTCTATTCCCCCANGNACCAAAACTGGGNAGCCNCCGGANNTCACACAGCTATTGGNGNGGNCNATNTCAGGCCGTCG-A-GCAAAACTGT--GA--TGA------C-TACAAANTT--G-----TGTGGTTCANAGGG----T----T----TCGG-TT-ATCCA-CGTGGACAGAATGC-G-CT---AAAGGAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAGAAAAACTCNAATGATTCGATACCAGAAGAGCAATAGATCNAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|1 : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTCGGGT--ACTGGCAAGTGGAAG---AGGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTTA-GGTAATGCCATTTTGGGTTAT--CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACC-TCTTCTGT--AAGAGCTTCGATCGTTCTT--GGCCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACG-CAGTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAG--CATATGCAAGTCG-ACCCTCTCCAAAGCATAACAAAAGTA---TGTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCAT-AGC-TCATTGCGC-TGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAATGTTTTGATATGAAAATTAAAGCACAGACC-AGGATCTC-GAC-ACCGTAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAAT------GCCGCTGTT----GGTGT------AGCACTTTGGAAATGA---CTGTTGACGACGTAATAGAAGAG---GAG-AG---------------------AAA-ATC-----GATGTT-------------------GAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGA-----GAACCAG--AATAGC-CTGGAATTGTCGTCGG--GGGACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGAC---GATCTA--TCTGT--AGACGAT-GACTGATAAAGGAGGGATCCCAACCTCCA---TGCTAT--TGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGT-----AAAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATAT-------AAGCCGGT-----TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAG-AGCACCAAATGCAAGCTCGTG-GGGCTGGAATACCTATGGAACGCATAGGCAAT-GGATATTGTTTGG---GGAACTCCCGCGCACGCTGACAGAAACAACAGATATA-TCTTTAGT-T-GTTTCTGATTATTTTACCAAATGGGTCGA-GGCATTTGCG-----ATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCA-------AAAAAGTTGTTGCAAGGTTTGGGGTTCCATGTGTCATACATT-----CGGACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTGGCAAAGTATTGAACATTAATAAGAACCCGTAC-GAACGCCC-TACCATCCCCAATCAGAACGGCATGG--TATGAGCGATTCAATAAGACTTTTGCTA--TC-AATGCTTCGTAACTTGGTG-ACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCA--TGTACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AA-GAG-AAGCT---AG-AAACTGCTCA-CA----T--CTTT--GTAAGG----CAGCACACAA---CACA--A-GCTATG-TTGA-GACAGAAGACTTT--GC---ACGACGCAGAAACTCTATTG--GC--AA--TCA---TT-CA--TCCCGG-TGA----TGAAGTTTATGTGTACTTTCCCAGGTATC-AGTCTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTG-AGGCAAAACTAT---A--TGATTTAACT-TACAAAGTTAGA-----TGTGGTTCAAAGGG----TAATAT----CAAG-TT-ATACAGTGTGGACAGAATGC-GTCTCA-AAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAG--AAACTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|10 : -TCAAAACAGACCAT-A-CCTCATTG-GTATGACTTCCAAGATTTAAGAACCCGG-AGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAAC-TTGTGATTTCAGTA-TAGAACACAAACCTAGGA-GTT-AAC-ATTATAACGCAG
gi|11 : ACTGATACA-TCTT--GG-TAGGATCAGATCATTTCACTCGATGTTCCGA-G-----TGTTTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG---------AACAAGTTATTACACGGTTTGGAGT
gi|12 : aGTG-CAAAGTT--GGGTATAGAAAAAAACTCGCAT-GAAT-CCG-TACCATCCCCAATC------GCATGACTTGTGAGCGGTTCAATTGCAC-T---CTAATTCAAATGCTT
gi|13 : AAACTT--G-----TGTGGTTTAGAGGGTAAAT----C----TCAGTTT-ATCCA-TTTTGTCAGAATGC-G-TTTTAAAAGGAGG
gi|14 : ccgttgacgaagtttacaattaaatttaCTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTT
gi|15 : ATGCCATTT-GGGATGT-GCAATGCGTCAGCCA-C-TTTCGAGCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|16 : ACGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|17 : tTTGAAAAAGAAAA-TTCTAATGATTTGATACCAGA--AGCAATAGATCAA
gi|18 : ATCGTTCCTGAG-TCTTTGCAGTTACTATCGTCGATTTATCA
gi|2 : AG-AT---------------------AAA-A-------GACGTC-------------------GAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGA-----GAACA-G--A--AGCTCTGGAATTATTGTCGGAAG-GATCGATGCTGAAGTATCTGACATC-CCAGAGAT-ATATTTGAGG-TGAAGGCCCAGGGTGTTTGCT-TTTCAGATGATGGGCTGA-A-----GAGAT-CCATCCACCAGACTGCT--GCTGTGCC-TTTCAATGAGGGACGACAT-------ATT--------------------ACCGC-AGGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATA-AAAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACTATGAA-AGCTCC-AACAA-AGTTCGTA------GGAG-----ATG----------------GGATACTATTTAGCAAAGGACACCCGCGCA--CCGACAAAAACGTAAGATATA-ATTT--AGTT-GTTTCTGATTATTTCACCAAATGGGTCGAGGGCATTTGTT-----AGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGT-TGCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCA-----TACGCTTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAAATGC-ACAATGCTCTGGTTATT-ATAAAGACCCTTATAGGACGCCCTTACCATTGCCTATCAGAT-GGGATGG--TG-GAGCGATTCAATAAGAC-ATCGCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATT---AGAACTGGGACGAGCTCTTCCCGTTCA-TCCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAA-AAG-AGGCT---AG-AAGCTGTTAA-CA----G--C--T--GT-----------------------------GCTAC-------GACAGAAG--TCT---------GATC-AGAAACTCTACTG--AC--AG--TCA---TTCAAACCC---GTTGA----CGAAGTTT
gi|3 : cccAACCGAT-AT-A-C-T-ATTGCAT-TGGTTTT-GAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAATATT-CAGTGTGAAAACTGACACACAA-CC-ACACTTTC-GAT-ATAATAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGCACAA--------ATTCAGGG-------TACAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGTAG---------------------AAACA-CTTTCAGATCTCCAGGGAAAAAGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC---------C-CTGGATTTATCATCGGGA-AGACCGATGCTGAAGTCTCTGTGCTC-CCA-AAATCACTTTTGGGGGTAAAGGGT---GATCTGC-CCCGT--AGACAATGAACTGA-AAAAGACAGAT-CCATCCTCTAAGTTACTTTACTGTGCC-TTTCAGTGAGAGACAACATGTACTCAAT
gi|3 : AATATTCTATTGGCCTGGGCTA-CAAAGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCT-AAGAGTTCC-AATGT-AGATCATGTGATCTGGAATACCTATGGAACACATattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcTGTATAAAATAAAT-GAGCC-TGAACAAATTTCT-AATAGTTCC-AATGT-AGCTCATGTGATCTGGAATACCTATGGAACACATAG-CAATGG-ATCATGCA----GAAGAACTCCCACGCA--CCAACATAAACAATCGATATAATCT--------GTCTCTGATTGATTCACTGAATGGGTCGA-GGCATTTGTT-----ATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--------AAAA-GTTGTTGCAAGATTTGGAGTTCATTATGTCATA-ATTATATGCATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAATTGT-ACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-ACGCCC-TTCCACCCCTAATTAGA--ncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|4 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaGATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAG-TGTACTGTTAAGTGGCAATG-------------GGGCCTAGATAGCATTCATAACCAAACATAGTCTG-TTCCAGTTTAAGGTAATGTTA-TTTGGGTTATT-CAATGTACCAGCGA-TATTt
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTT-AGACCTTTGCAGTTACTAT---------------------------GGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAATT-TCT---ATCAGT---GGTCACTTATGTTAAACAC-TTTCGACATT--ATC--------------TTTACAA-TGAGAACAGATCATCA-C-TTATTGCGT-TGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAATGGT-CAATATAACAATTG-AACACCAACA-CGGCCGTCTGACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTT---GGGTGTACATGTAGCAC--TGGAAATGA---CTGTTGATGACGTAGCAGAAGAG---GAG-AGACCCCCTATCTGTTCTTCAGAAAA-A-C-----GATGTT-------------------GAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAA--AAC-CTGGAATcaaatgaaggcttttg
gi|6 : TGGGTATGGGGATTG-AAAGAG-AAGCT---AA-AAGTTGTCCA-CA----G--C--TTTGT---GACTAC--------ATAGCACA--A-GCTATGCT--GCGACAAAAG--TCT--CTGCAA-GACA-AGAAACTATACTG--GC--AA--TCA---TT--------------------GAA------GTCTATTCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTG-GCAAAACTGT-------------------CAAATTT--A-----TGTGGTTCAA--GG----T----T----TACG-T---------GTGGACAG---------------AGAAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAG-AAAACTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|7 : GACGAAATGTATCTACTCCATTGGATATCATGTAT--GAAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAG-GAGCAAGCTCACAA-AAGC-GTTCGTCAAAATG--A--A--GA---G----C--------A---TGCAATG-G-TA------A-GACAAAAG--CATTACC---ATGACA-AAAGATTGAATTG--GGGGAACTTTAAAGTT-AA---------TGA----TGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCA-A-G-AAAA-TGTCAGATGTGA------CATATCATGTT--GTCAATTGTGGTTCACAGGG----T----TCTAATCGG-GTAATCCA-CGTGGATAGAATGCGG-CT---AAAG
gi|8 : AGCGA-CATTT-GAACGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTc
gi|9 : ATGGGTGTGACAATTGCAA-GAT-AGACTTG-AGCAAGCT---CA-CA----AAAT--T--GT---T----CGTCAAA--A---TGCA--GTGGTA------A-GACAAAAG--CATTACC---ATGACA-A-AAATTGAATTGAGGG--AA---CT---TT-AA--T----G-TAAATTATGAGGTGTATGTCTATTTTCC-ACGAACCAAAACGGGACAGTCGCCAAAATTTAC-TAGCTATTG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111
lowQualScore : 1 1 11 1 1 1 11 1 222 1 1 1 1 2222 11 1 222 1 11 222 11 1 111 11 1 1 11 222 5555555555555555555555555 11 1 1 11 1 1 11 222 22222 11 11 22222 222 11 11 3333333 444444444444 1 3333333333 1 1 3333333 1 222222 222 1 1 22222 1 1 222 1 1 2 111 1 1 1 11 22222 22222 1 1 1 11 11 1 1 222222 11 1 88888888888888888888888888 11 1 1 11 1 11 22 1 11 55555555555555 1 111 1 1 11 1 111 11 111 1 1 111 1 1 66666666666666666666666666 222 55555555555555555555555555555555555555555555555555555 11 11 1 222222 333333333 1 2222 1 33333 11 1 11111 1 111 2222 1 1 66666666666666666666 1 1 22222 22222 11 11 1 2222222 33333 1 1 11 1 1111 1 2222222 11 1 22222222 11 22222 1 11 3333333 66666666666 2222222 1 1 1 22 11 222 11 1 1 222 1 1111 111 1 222 33333333333333333333333333333333333333333333333333 1 11 111111 1 666666666666666666666 1 111 1 1 222 1 22 8888888888888888888 33333 66666666666666666666666666666 333333 1 11 11 222222 3333333 6666666666666666666666 222 2222 1 1 1 1 1 2222 11
lowQualScore : 1 5 1 5 88 5 5 5 88 5 1 111 5 5 5 5 4444 88 5 1 1 111 1 5 1 88 1 1 111 1 88 1 5 999 1 1 77 5 1 5 1 88 111 1 1 1 8888888888888888888888888 1 88 5 5 88 5 5 1 1 1 1 88 000 66666 88 1 88 55555 2 1 111 88 1 1 1 1 77 2222222 1 777777777777 1 1 5 9999999999 5 5 3333333 1 5 1 888888 000 5 2 5 44444 5 1 1 5 0 000 7 3 8888 3 7 5 3 777 0 0 3 0 1 88 5 1 1 88 1 1 1 1 22 66666 1 1 77777 5 1 5 1 5 1 66 1 88 1 2 2 3 3 999999 88 5 33333333333333333333333333 1 88 5 1 1 5 66 1 5 11 0 7 6 00 0 7 1 5 88 22222222222222 3 2 111 0 6 2 0 11 0 3 0 777 44 0 33 333 1 0 0 5 3 0 444 0 0 1 0 00000000000000000000000000 0 7 333 55555555555555555555555555555555555555555555555555555 88 33 0 999 1 777777 444444444 0 4444 1 3 0 6 6 6 1 33333 1 22 2 44444 3 999 8888 3 0 2 99999999999999999999 5 5 55555 77777 1 11 6 44 0 4444444 1 33333 1 1 3 0 0 1 1 5 22 1 0 0 5555 3 3 4 3 1 1111111 88 1 0 11 0 77777777 1 4 22 55555 0 1 4 99 1 99 55 2222222 0 77777777777 0 0 1 1111111 6 1 9 1 3 0 7 2 0 3 33 88 7 444 88 3 1 1 5 111 5 1 1 1 1 3333 0 0 3 6 999 0 0 8 555 8 0 55555555555555555555555555555555555555555555555555 33 44 1 22 3 22 555555 0 1 666666666666666666666 3 5 1 444 333 1 1 11 5 5 0 1 1 333 0 3 00 6 7777777777777777777 1 88888 44 55555555555555555555555555555 3 555555 0 88 1 1 7 7 0 44 6 7 999999 2222222 2222222222222222222222 111 4444 1 5 5 1 1 1 5 5 5 22 3333 88
lowQualScore : . . . . .. . . . .. . . ... . . . . .... .. . . . ... . . . .. . . ... . .. . . ... . . .. . . . . .. ... . . . ......................... . .. . . .. . . . . . . .. ... ..... .. . .. ..... . . ... .. . . . . .. ....... . ............ . . . .......... . . ....... . . . ...... ... . . . ..... . . . . . ... . . .... . . . . ... . . . . . .. . . . .. . . . . .. ..... . . ..... . . . . . . .. . .. . . . . . ...... .. . .......................... . .. . . . . .. . . .. . . . .. . . . . .. .............. . . ... . . . . .. . . . ... .. . .. ... . . . . . . ... . . . . .......................... . . ... ..................................................... .. .. . ... . ...... ......... . .... . . . . . . . ..... . .. . ..... . ... .... . . . .................... . . ..... ..... . .. . .. . ....... . ..... . . . . . . . . .. . . . .... . . . . . ....... .. . . .. . ........ . . .. ..... . . . .. . .. .. ....... . ........... . . . ....... . . . . . . . . . . .. .. . ... .. . . . . ... . . . . . .... . . . . ... . . . ... . . .................................................. .. .. . .. . .. ...... . . ..................... . . . ... ... . . .. . . . . . ... . . .. . ................... . ..... .. ............................. . ...... . .. . . . . . .. . . ...... ....... ...................... ... .... . . . . . . . . . .. .... ..
lowQualScore : 0 5 0 5 00 5 5 5 55 5 0 555 5 5 0 0 5555 00 5 0 0 000 0 0 0 00 0 0 000 0 00 0 5 000 0 0 55 5 0 5 0 55 555 0 0 0 0000000000000000000000000 0 00 5 0 00 0 5 0 0 0 0 00 555 00000 00 0 00 00000 5 0 555 00 0 0 0 0 55 0000000 0 555555555555 0 0 0 5555555555 5 0 0000000 0 5 0 000000 555 5 5 5 55555 0 0 0 5 7 777 3 3 3333 7 3 5 7 777 7 0 5 0 0 33 0 0 0 00 0 0 0 0 00 55555 0 0 00000 0 0 0 0 5 0 55 0 55 0 3 0 7 7 000000 55 5 00000000000000000000000000 0 00 0 0 0 0 55 0 0 00 7 3 7 77 7 3 0 5 55 00000000000000 3 5 000 0 5 5 0 88 8 2 0 555 00 2 88 555 2 2 8 5 2 0 000 0 0 0 7 77777777777777777777777777 7 3 333 33333333333333333333333333333333333333333333333333333 88 88 0 000 0 555555 222222222 0 3333 0 3 7 7 7 7 0 33333 0 77 0 33333 3 333 7777 3 7 0 00000000000000000000 5 0 55555 00000 0 00 7 33 3 3333333 0 33333 0 0 2 0 0 0 0 0 00 2 0 2 5555 2 2 2 3 0 3333333 33 0 7 22 0 88888888 2 2 55 00000 0 0 2 00 2 88 88 5555555 7 00000000000 7 7 0 1111111 5 2 0 2 2 0 0 5 0 2 88 33 3 333 33 3 0 0 5 000 5 0 0 0 0 7777 7 7 7 7 000 7 0 0 000 0 8 22222222222222222222222222222222222222222222222222 22 66 4 66 2 44 222222 6 4 000000000000000000000 8 0 0 555 555 0 0 00 5 5 2 0 0 333 7 3 00 7 3333333333333333333 0 88888 00 22222222222222222222222222222 2 222222 0 00 0 0 3 3 7 77 7 3 000000 5555555 5555555555555555555555 000 0000 0 5 0 0 0 0 5 5 0 00 5555 55
consensus : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCA-TTTGGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACA--AGCCGCTGTT--GGGTG----TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGG-ACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC-T-ACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATAT-ATCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT-CGC-C-GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCAC--AG--C--T--GT------G-C-CAC--AG-CGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AATCATT-AAA--TC---G-TGA----TGAAGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG----T----T----TCGG-TT-ATCCA-CGTGGACAGAATGCG-NTT--AAA-GAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Reference ( family-1193 ) : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTTTGGGTTA-T-CAATGCGCCAGCGA-CATTTGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTAGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACA--AGCCGCTGTT--GGGTGT---TGCAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGGACCGATGCTGAAGTCTCTGTGNTC-CCAGAGATCACTTTTGGGGGTGAAGGNCGA-----TCTNCCCCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC-TTGCTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAN-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAAAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATAT-ATCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATTACGC-C-GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCGAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGCAAGAG-AAGCT---AG-AAGCTGTTCAC--AG--C--T--GT------G-C-CA---AA-CGCAG-GCTACG-T--A-GACAAAAGTNTTACCACGACG-AGAAACTNTATTG--GC--AATCATT-AA---TC---G-TGA----TGAAGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TATGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG----T----T----TCGG-TT-ATCCA-CGTGGACAGAATGCG-CTC--AAA-GAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
gi|1 : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTCGGGT--ACTGGCAAGTGGAA--GA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTTA-GGTAATGCCATTTTGGGTTA-T-CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACC-TCTTCTGTAA--GAGCTTCGATCGTTCTT-GGCCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACG-CAGTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAGCATAT--GCAAGTCGA-CCCTCTCCAAAGCATAACAAAAGTAT---GTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCAT-AGC-TCATTGCGC-TGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTTTGATATGAAAATTAAAGCACAGACC-AGGATCTC-GAC-ACCGTAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAAT------GCCGCTGTT--GG-------TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAATCGA--TG-TTGAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGAG-----AACCAG--AATAGC-CTGGAATTGTCGTCGGG--GGACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGACGA-----TCTATCT-GTAGACGATG-ACTGATAAAGGAGGGATCCCAACCTCCA---TGC-T-ATTGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGTA-----AAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATATA-------AGCCGGT-----TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAGAGCACCAAATGCAAGCTCGTGGGG-CTGGAATACCTATGGAACGCATAGGCAATGGATATTGTTTGG-G--GAACTCCCGCGCACGCTGACAGAAACAACAGATAT-ATCTTTAGTT-GTTTCTGATTATTTTACCAAATGGGTCGAGG-CATTTGCG-----ATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCAAAAAAG-------TTGTTGCAAGGTTTGGGGTTCCATGTGTCATACATT-----C-GGACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTG-GCAAAGTATTGAACATTAATAAGAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGAACGGCATGG--TATGAGCGATTCAATAAGACTTTTGCTA--TC-AATGCTTCGTAACTTGGTGA-CGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCATGT--ACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AAGAG-AAGCT---AG-AAACTGCTCAC--AT--C--TTTGTAAGGCAG-CACAC--AA-CACAA-GCTATG-TTGA-GACAGAAGACTTTGCACGACGCAGAAACTCTATTG--GC--AATCATT-CA---TCCCGG-TGA----TGAAGTTTATGTGTACTTTCCCAGGTATCAGT-CTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTG-AGGCAAAACTA-----TATGAT-TTAACTTACAAAGTTAGA---TGTGGTTCAAAGGG----TAATAT----CAAG-TT-ATACAGTGTGGACAGAATGCGTCTC--AAAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAGAAA-CTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|10 : -TCAAAACAGACCAT-A-CCTCATTG-GTATGACTTCCAAGATTTAAGAACCCGG-AGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAACTTGT---GATTTCAGTATAG-AACACAAACCTAGGA-GTT-AAC-ATTATAACGCAG
gi|11 : ACTGATAC-ATCTT--GGTAGGATCAGATCATTTCACTCGATGTTCCGAG------TGTTTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG--AACAAG-------TTATTACACGGTTTGGAGT
gi|12 : aGTG--CAAAGTT--GGGTATAGAAAAAAACTCGCAT-GAAT-CCGT-ACCATCCCCAATC------GCATGACTTGTGAGCGGTTCAATTGCACT----CTAATTCAAATGCTT
gi|13 : AAACTTG-----TGTGGTTTAGAGGGTAAAT----C----TCAGTTT-ATCCA-TTTTGTCAGAATGCG-TTTTAAAA-GGAGG
gi|14 : ccgttgacgaagtttacaattaaatttaCTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTT
gi|15 : ATGCCA-TTTGGGATG-TGCAATGCGTCAGCCA-CTTTCGA-GCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|16 : ACGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|17 : tTTGAAAAAGAAAATTCTAATGATTTGATACCAGA--AGCAATAGATCAA
gi|18 : ATCGTTCCTGAGTCTTTGCAGTTACTATCGTCGATTTATCA
gi|2 : ---------------------AGAT---------------------AAAA--GA--CG-TCGAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGAG-----AACA-G--AA--GCTCTGGAATTATTGTCGGAAGG-ATCGATGCTGAAGTATCTGACATC-CCAGAGAT-ATATTTGAGG-TGAAGGCCCAGGGTGTTTGCTTTTCAGATGATGGGCTGA-A-----GAGATCC-ATCCACCAGACTGC-T-GCTGTGCCTTT-CAATGAGGGACGACAT-------ATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATAA-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACTATGAAAGCTCCAA-CAAA-GTTCGTA------GGAG-----ATGG---------------GATACTATTTAGCAAAGGACACCCGCGCAC--CGACAAAAACGTAAGATAT-AATTT--AGTTGTTTCTGATTATTTCACCAAATGGGTCGAGGGCATTTGTT-----AGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGT-TGCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-----CGC-TTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAAATGC--ACAATGCTCTGGTTATT-ATAAAGACCCTTATAGGACGCCCTTACCATTGCCTATCAGAT-GGGATGG--TG-GAGCGATTCAATAAGACATC-GCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCAT-CCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAAAAG-AGGCT---AG-AAGCTGTTAAC--AG--C--T--GT------G-C-----------------TACG-------ACAGAAGTCTGATCA-------GAAACTCTACTG--AC--AGTCATTCAAAC-CC---GTTGA----CGAAGTTT
gi|3 : cccAACCGAT-AT-A-C-T-ATTGCAT-TGGTTTT-GAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAA--TATTC-AGTGTGAAAACTGACACACAA-CC-ACACTTTC-GAT-ATAATAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGCACA--AA------TTCAGGGTA------CAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGTAGAAACACTTTCAGATCTCCAGGG---------------------AAAA-AGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC---------C-CTGGATTTATCATCGGGAAG-ACCGATGCTGAAGTCTCTGTGCTC-CCAAA-ATCACTTTTGGGGGTAAAGGGTGA-----TCTGCCCCGTAGACAATGAACTGA-AAAAGACAGATCC-ATCCTCTAAGTTACTTTACTGTGCCTTT-CAGTGAGAGACAACATGTACTCAAT
gi|3 : AATATTCTATTGGCCTGGGCTAC-AAAGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCTAAGAGTTCCAA-TGTA-GATCATGTGATCTGGAATACCTATGGAACACATattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcTGTATAAAATAAAT-GAGCC-TGAACAAATTTCTAATAGTTCCAA-TGTA-GCTCATGTGATCTGGAATACCTATGGAACACATAG-CAATGGATCATGC---A-GAAGAACTCCCACGCAC--CAACATAAACAATCGATATAATC------T-GTCTCTGATTGATTCACTGAATGGGTCGAGG-CATTTGTT-----ATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--AAAAG-------TTGTTGCAAGATTTGGAGTTCATTATGTCATA-ATTATATGC-ATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAA-T-TGTACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-ACGCCCT-TCCACCCCTAATTAGA--ncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|4 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaGATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAG-TGTACTGTTAAGTGGCAATGG-GGC------------CTAGATAGCATTCATAACCAAACATAGTCTGTT-CCAGTTTAAGGTAATGTTA-TTTGGGTTATT-CAATGTACCAGCGA-TATTCAA-ATGAt
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTTAGACCTTTG---------------------CAG------TTACTATGGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAATT-TCTATCAGTGGT------CACTTATGTTAAACAC-TTTCGACATT--ATC--------------TTTACAA-TGAGAACAGATCATCA-C-TTATTGCGT-TGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAA--TGGTC-AATATAACAATTG-AACACCAACA-CGGCCGTCTGACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTT--GGGTGTACATGTAGCAC--TGGAAATGACT---GTTGATGACGTAGCAGAAGA-----GG---------------------AGAGACCCCCTATCTGTTCTTCAGAAAAA-CGA--TG-TTGAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAAA--AC-CTGGAATaggcttttg
gi|6 : TGGGTATGGGGATTGAAAGAG-AAGCT---AA-AAGTTGTCCAC--AG--CTTT--GT------GAC-TACATAG-CACAA-GCTATGCT--GCGACAAAAGTCTCTGCAAGACA-AGAAACTATACTG--GC--AATCAT---------------------TGAA------GTCTATTCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTGG-CAAAACTG-----T--------------CAAATTTA-----TGTGGTTCAA--GG----T----T----TACG-T---------GTGGACAG--------------A-GAAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAGAAAACTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|7 : GACGAAATGTATCTACTCCATTGGATATCATGTATG--AAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAGGAGCAAGCTCACAA-AAGC-GTTCGTCAAA--A--T--G------------A---AG-AGCAT-GCAATGGT--AAGACAAAAGCATTACCATGACA-AAAGATTGAATTG--GGGGAA-CTTT-AAAGTTA---A-TGA----TGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCA-AG--AAAA-TGTCAGATGTGACAT------ATCATGTTGTCAATTGTGGTTCACAGGG----T----TCTAATCGG-GTAATCCA-CGTGGATAGAATGCG-GCT--AAA-G
gi|8 : AGCGA-CATTTGA-ACGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTc
gi|9 : ATGGGTGTGACAATTGCAAGAT-AGACTTG-AGCAAGCT---CAC--AAAAT--T--GTTC----G-T-CA---AAATGCAGTGGTA------A-GACAAAAGCATTACCATGACA-A-AAATTGAATTGAGGG--AA-CTTT-AA---T----G-TAAATTATGAGGTGTATGTCTATTTTCC-ACGAACCAAAACGGGACAGTCGCCAAAATTTAC-TAGCTATTGCAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111
lowQualScore : 1 1 11 1 1 1 11 1 222 1 1 1 1 2222 11 1 222 1 11 222 11 1 111 11 1 1 11 222 5555555555555555555555555 11 1 1 11 1 1 11 222 22222 11 11 22222 222 11 11 3333333 444444444444 1 3333333333 1 1 3333333 1 222222 222 1 1 22222 1 1 222 1 1 1 111 1 1 1 11 22222 22222 1 1 1 11 11 1 1 222222 11 1 88888888888888888888888888 11 1 1 11 1 11 111 1 11 55555555555555 1 111 1 1 11 1 111 11 1111 1 1 111 1 1 444444444444444444444444 222 55555555555555555555555555555555555555555555555555555 11 11 1 222222 3333333 1 1 33333 1 11111 1 111 11 1 1 66666666666666666666 1 1 3333333333333 11 1 1 2222222 33333 1 1 1 11 1 1 2222222 11 1 22222222 11 22222 1 11 3333333 777777777777 2222222 1 1 1 22 11 2222 11 1 1 222 1 111 222 1111111111111111111111111111111111111111111111111 111111 1111 11 5555555555 1 11111111 1 1 222 222 888888888888888888 33333333 66666666666666666666666666666 33333 11 11 222222 3333333 6666666666666666666666 222 2222 1 1 1 1 1 2222 11
lowQualScore : 1 5 1 5 88 5 5 5 88 5 1 111 5 5 5 5 4444 88 5 1 1 111 1 5 1 88 1 1 111 1 88 1 5 999 1 1 77 5 1 5 1 88 111 1 1 1 8888888888888888888888888 1 88 5 5 88 5 5 1 1 1 1 88 000 66666 88 1 88 55555 2 1 111 88 1 1 1 1 77 2222222 1 777777777777 1 1 5 9999999999 5 5 3333333 1 5 1 888888 000 5 2 5 44444 5 1 1 5 0 000 7 3 8888 3 7 5 3 777 0 0 1 0 1 88 5 1 1 88 1 1 1 1 22 66666 1 1 77777 5 1 5 1 5 1 66 1 88 1 2 2 3 3 999999 88 5 33333333333333333333333333 1 88 5 1 1 5 66 1 5 88 0 0 7 6 999 0 7 1 5 88 22222222222222 3 2 111 0 6 2 0 11 0 3 0 777 44 0 33 0000 1 0 0 5 3 0 444 0 0 1 0 888888888888888888888888 7 333 55555555555555555555555555555555555555555555555555555 88 33 0 999 1 777777 7777777 0 0 7 1 3 6 6 6 1 33333 2 6 44444 3 999 88 3 0 2 99999999999999999999 5 5 2222222222222 1 11 6 3 0 4444444 1 33333 1 1 3 0 0 1 1 0 0 2 11 0 5 33 3 3 4 3 1 1111111 88 1 0 11 0 77777777 1 4 22 55555 0 1 4 99 1 99 55 2222222 0 666666666666 0 0 1 1111111 6 1 9 1 3 0 7 2 0 3 33 88 7 4444 88 3 1 1 5 111 5 1 1 1 1 7 6 0 3 6 999 0 8 8 555 8 0 7777777777777777777777777777777777777777777777777 1 22 77 8 3 22 555555 4444 8 11 6666666666 1 3 5 1 11111111 1 1 11 5 5 0 1 1 333 0 222 6 6 888888888888888888 1 66666666 44 55555555555555555555555555555 3 33333 88 1 1 7 7 0 44 6 7 999999 2222222 2222222222222222222222 111 4444 1 5 5 1 1 1 5 5 5 22 3333 88
lowQualScore : . . . . .. . . . .. . . ... . . . . .... .. . . . ... . . . .. . . ... . .. . . ... . . .. . . . . .. ... . . . ......................... . .. . . .. . . . . . . .. ... ..... .. . .. ..... . . ... .. . . . . .. ....... . ............ . . . .......... . . ....... . . . ...... ... . . . ..... . . . . . ... . . .... . . . . ... . . . . . .. . . . .. . . . . .. ..... . . ..... . . . . . . .. . .. . . . . . ...... .. . .......................... . .. . . . . .. . . .. . . . . ... . . . . .. .............. . . ... . . . . .. . . . ... .. . .. .... . . . . . . ... . . . . ........................ . ... ..................................................... .. .. . ... . ...... ....... . . . . . . . . . ..... . . ..... . ... .. . . . .................... . . ............. . .. . . . ....... . ..... . . . . . . . . . . .. . . .. . . . . . ....... .. . . .. . ........ . . .. ..... . . . .. . .. .. ....... . ............ . . . ....... . . . . . . . . . . .. .. . .... .. . . . . ... . . . . . . . . . . ... . . . ... . . ................................................. . .. .. . . .. ...... .... . .. .......... . . . . ........ . . .. . . . . . ... . ... . . .................. . ........ .. ............................. . ..... .. . . . . . .. . . ...... ....... ...................... ... .... . . . . . . . . . .. .... ..
lowQualScore : 0 5 0 5 00 5 5 5 55 5 0 555 5 5 0 0 5555 00 5 0 0 000 0 0 0 00 0 0 000 0 00 0 5 000 0 0 55 5 0 5 0 55 555 0 0 0 0000000000000000000000000 0 00 5 0 00 0 5 0 0 0 0 00 555 00000 00 0 00 00000 5 0 555 00 0 0 0 0 55 0000000 0 555555555555 0 0 0 5555555555 5 0 0000000 0 5 0 000000 555 5 5 5 55555 0 0 0 5 7 777 3 3 3333 7 3 5 3 777 7 0 0 0 0 33 0 0 0 00 0 0 0 0 00 55555 0 0 00000 0 0 0 0 5 0 55 0 55 0 0 0 7 7 000000 55 5 00000000000000000000000000 0 00 0 0 0 0 55 0 0 00 7 7 3 7 777 7 3 0 5 55 00000000000000 3 5 000 0 5 5 0 88 8 2 0 555 00 2 88 5555 2 2 8 5 2 0 000 0 0 0 7 333333333333333333333333 3 333 33333333333333333333333333333333333333333333333333333 88 88 0 000 0 555555 0000000 2 0 3 0 3 7 7 7 0 33333 0 7 33333 3 333 33 3 7 0 00000000000000000000 5 0 5555555555555 0 00 7 3 3 3333333 0 33333 0 0 2 0 0 0 0 2 0 0 22 2 5 88 2 2 2 3 0 3333333 33 0 7 22 0 88888888 2 2 55 00000 0 0 2 00 2 88 88 5555555 7 000000000000 7 7 0 1111111 5 2 0 2 2 0 0 5 0 2 88 33 3 0000 33 3 0 0 5 000 5 0 0 0 0 3 7 7 7 7 000 7 8 0 000 0 8 4444444444444444444444444444444444444444444444444 4 44 22 0 2 44 222222 8888 0 88 8888888888 8 8 0 0 22222222 0 0 00 5 5 2 0 0 333 7 777 7 7 000000000000000000 0 88888888 00 22222222222222222222222222222 2 55555 00 0 0 3 3 7 77 7 3 000000 5555555 5555555555555555555555 000 0000 0 5 0 0 0 0 5 5 0 00 5555 55
consensus : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TG-TTCGATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACA--AGCCGCTGTTGGG-G----TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--A--AGC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGAT-CCATCCTCCAGGCTGC--TACTGTGCC-TTTCAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCC-AACGT-AGCTCGTGTGATCTGGAATACCTATGGAACGCATA-GCAATGGATANTGTTTGG-GAAGAACTCCCGCGCA--CCGACANAAACGACNGATAT-ATCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CG-C-GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGAC-TTCGCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCAC--AG--C--T--GT---G-C----CACA--GCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-A-GCAAAACTG-----TGTGA------C-TACAAANTT--G-----TGTGGTTCAAAGGG----T----T----TCGG-TT-ATCCA-CGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Reference ( family-1193 ) : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TG-TTCGATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACA--AGCCGCTGTTGGGTG----TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--A--AGC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGAT-CCATCCTCCAGGCTGC--TACTGTGCC-TTTCAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCC-AACGT-AGCTCGTGTGATCTGGAATACCTATGGAACGCATA-GCAATGGATANTGTTTGG-GAAGAACTCCCGCGCA--CCGACANAAACGACNGATAT-ATCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGCC-GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGAC-TTCGCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCAC--AG--C--T--GT---G-C----CACA--GCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAAGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-A-GCAAAACTG-----TGTGA------C-TACAAANTT--G-----TGTGGTTCAAAGGG----T----T----TCGG-TT-ATCCA-CGTGGACAGAATGCGNTT--AAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
gi|1 : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTCGGGT--ACTGGCAAGTGGAA--GA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTTA-GGTAATGCCATTTTGGGTTA-T-CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACC-TCTTCTGTAA--GAGCTTCGATCGTTCTTGG-CCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACG-CAGTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAG--CATATGCAAGTCG-ACCCTCTCCAAAGCATAACAAAAGTA---TGTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCAT-AGC-TCATTGCGC-TGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTTTGATATGAAAATTAAAGCACAGACC-AGGATCTC-GAC-ACCGTAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAAT------GCCGCTGTTG---G----TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAATCGA--TG-TTGAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGAG-----AACCAG--AATAGC-CTGGAATTGTCGTCGGG-GGACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGACGA-----TCTATCT-GTAGACGAT-GACTGATAAAGGAGGGATCCCAACCTCCA---TGC--TATTGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGT-----AAAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATAT-------AAGCCGGT-----TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAGAGCACCAAATGCAAGCTCGTG-GGGCTGGAATACCTATGGAACGCATAGGCAATGGATATTGTTTGG-G--GAACTCCCGCGCACGCTGACAGAAACAACAGATAT-ATCTTTAGTT-GTTTCTGATTATTTTACCAAATGGGTCGAGG-CATTTGCG-----ATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCAAAAAAG-------TTGTTGCAAGGTTTGGGGTTCCATGTGTCATACATT------C-GGACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTG-GCAAAGTATTGAACATTAATAAGAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGAACGGCATGG--TATGAGCGATTCAATAAGACTTTTGCTA--TC-AATGCTTCGTAACTTGGTG-ACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCA--TGTACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AAGAG-AAGCT---AG-AAACTGCTCAC--AT--CTTT--GTAAGG-CAGCACACA--ACACAA-GCTATG-TTGA-GACAGAAGACTTTGCACGACGCAGAAACTCTATTG--GC--AA---TCAT-T--CA--TCCCGG-TGATGAAGTTTATGTGTACTTTCCCAGGTATC-AGTCTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTG-AGGCAAAACTA-----TATGATTTAACT-TACAAAGTTAGA-----TGTGGTTCAAAGGG----TAATAT----CAAG-TT-ATACAGTGTGGACAGAATGCGTCTCAAAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAG-AAACTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|10 : -TCAAAACAGACCAT-A-CCTCATTG-GTATGACTTCCAAGATTTAAGAACCCGG-AGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAACTTG-T--GATTTCAGTATAG-AACACAAACCTAGGA-GTT-AAC-ATTATAACGCAG
gi|11 : ACTGATAC-ATCTT--GGTAGGATCAGATCATTTCACTCGATGTTCCGAG------TGTTTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG--AACAAG-------TTATTACACGGTTTGGAGT
gi|12 : aGTG--CAAAGTT--GGGTATAGAAAAAAACTCGCAT-GAAT-CCGT-ACCATCCCCAATC------GCATGACTTGTGAGCGGTTCAATTGCAC-T---CTAATTCAAATGCTT
gi|13 : AAACTT--G-----TGTGGTTTAGAGGGTAAAT----C----TCAGTTT-ATCCA-TTTTGTCAGAATGCGTTTTAAAAGGAGG
gi|14 : ccgttgacgaagtttacaattaaatttaCTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTT
gi|15 : ATGCCATTT-GGGATG-TGCAATGCGTCAGCCA-CTTTCGA-GCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|16 : ACGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|17 : tTTGAAAAAGAAAATTCTAATGATTTGATACCAGA--AGCAATAGATCAA
gi|18 : ATCGTTCCTGAGTCTTTGCAGTTACTATCGTCGATTTATCA
gi|2 : ---------------------AGAT---------------------AAAA--GA--CG-TCGAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGAG-----AACA-G--A--AGCTCTGGAATTATTGTCGGAAGGATCGATGCTGAAGTATCTGACATC-CCAGAGAT-ATATTTGAGG-TGAAGGCCCAGGGTGTTTGCTTTTCAGATGATGGGCTGA-A-----GAGAT-CCATCCACCAGACTGC--TGCTGTGCC-TTTCAATGAGGGACGACAT-------ATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATAA-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACTATGAAAGCTCC-AACAA-AGTTCGTA------GGAG-----ATGG---------------GATACTATTTAGCAAAGGACACCCGCGCA--CCGACAAAAACGTAAGATAT-AATTT--AGTTGTTTCTGATTATTTCACCAAATGGGTCGAGGGCATTTGTT-----AGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGT-TGCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-------CGCTTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAAATGC--ACAATGCTCTGGTTATT-ATAAAGACCCTTATAGGACGCCCTTACCATTGCCTATCAGAT-GGGATGG--TG-GAGCGATTCAATAAGAC-ATCGCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCAT-CCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAAAAG-AGGCT---AG-AAGCTGTTAAC--AG--C--T--GT---G-C----TAC----------------------GACAGAAGTCTGATC-------AGAAACTCTACTG--AC--AG---TCAT-TCAAAC-CC---GTTGACGAAGTTT
gi|3 : cccAACCGAT-AT-A-C-T-ATTGCAT-TGGTTTT-GAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAA--TA-TTCAGTGTGAAAACTGACACACAA-CC-ACACTTTC-GAT-ATAATAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGCACA--AA------TTCAGGG----TACAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGTAGAAACACTTTCAGATCTCCAGGG---------------------AAAA-AGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC---------C-CTGGATTTATCATCGGGAAGACCGATGCTGAAGTCTCTGTGCTC-CCAAA-ATCACTTTTGGGGGTAAAGGGTGA-----TCTGCCCCGTAGACAATGAACTGA-AAAAGACAGAT-CCATCCTCTAAGTTACTTTACTGTGCC-TTTCAGTGAGAGACAACATGTACTCAAT
gi|3 : AATATTCTATTGGCCTGGGCTAC-AAAGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCTAAGAGTTCC-AATGT-AGATCATGTGATCTGGAATACCTATGGAACACATattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcTGTATAAAATAAAT-GAGCC-TGAACAAATTTCTAATAGTTCC-AATGT-AGCTCATGTGATCTGGAATACCTATGGAACACATA-GCAATGGATCATGC---A-GAAGAACTCCCACGCA--CCAACATAAACAATCGATATAATC------T-GTCTCTGATTGATTCACTGAATGGGTCGAGG-CATTTGTT-----ATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--AAAAG-------TTGTTGCAAGATTTGGAGTTCATTATGTCATA-ATTATATG-C-ATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAA-T-TGTACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-ACGCCCT-TCCACCCCTAATTAGA--ncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|4 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaGATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAG-TGTACTGTTAAGTGGCAATGG-GGC------------CTAGATAGCATTCATAACCAAACATAGTCTG-TTCCAGTTTAAGGTAATGTTATTT-GGGTTATT-CAATGTACCAGCGA-TATTCAA-ATGAt
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTTAGACCTTTG---------------------CAG------TTACTATGGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAATT-TCTATCAGTGGT------CACTTATGTTAAACAC-TTTCGACATT--ATC--------------TTTACAA-TGAGAACAGATCATCA-C-TTATTGCGT-TGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAA--TG-GTCAATATAACAATTG-AACACCAACA-CGGCCGTCTGACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTTGGGTGTACATGTAGCAC--TGGAAATGACT---GTTGATGACGTAGCAGAAGA-----GG---------------------AGAGACCCCCTATCTGTTCTTCAGAAAAA-CGA--TG-TTGAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAA--AAC-CTGGAATaggcttttg
gi|6 : TGGGTATGGGGATTGAAAGAG-AAGCT---AA-AAGTTGTCCAC--AG--C--TTTGT---GAC----TACATAGCACAA-GCTATGCT--GCGACAAAAGTCTCTGCAAGACA-AGAAACTATACTG--GC--AA---TCAT-T-GAA----------------------GTCTATTCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTG-GCAAAACTG-----T--------------CAAATTT--A-----TGTGGTTCAA--GG----T----T----TACG-T---------GTGGACAGA-------------GAAGGCAAAAAAT--TACAGGAGAAATCTGTTGAAAAAGAAAACTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|7 : GACGAAATGTATCTACTCCATTGGATATCATGTATG--AAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAGGAGCAAGCTCACAA-AAGC-GTTCGTCAAA--A--T--G------------A-A--GAGCAT-GCAATGGT--AAGACAAAAGCATTACCATGACA-AAAGATTGAATTG--GGGGAA----CTT-T-AAAGTTA---A-TGATGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCA-A-G-AAAA-TGTCAGATGTGA------CATATCATGTT--GTCAATTGTGGTTCACAGGG----T----TCTAATCGG-GTAATCCA-CGTGGATAGAATGCGGCT--AAAG
gi|8 : AGCGA-CATTTGA-ACGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTc
gi|9 : ATGGGTGTGACAATTGCAAGAT-AGACTTG-AGCAAGCT---CAC--AAAAT--T--GTTC-G-T----CAAA--ATGCAGTGGTA------A-GACAAAAGCATTACCATGACA-A-AAATTGAATTGAGGG--AACTTTAATGT-AAA--TT-------ATGAGGTGTATGTCTATTTTCC-ACGAACCAAAACGGGACAGTCGCCAAAATTTAC-TAGCTATTGCAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111
lowQualScore : 1 1 11 1 1 1 11 1 222 1 1 1 1 2222 11 1 222 1 11 222 11 1 111 11 1 1 11 222 5555555555555555555555555 11 1 1 11 1 1 11 222 22222 11 11 22222 222 11 11 3333333 444444444444 1 3333333333 1 1 3333333 1 222222 222 1 1 22222 1 1 222 1 1 1 111 1 1 1 11 22222 22222 1 1 1 11 11 1 1 222222 11 1 88888888888888888888888888 11 1 1 11 1 11 22 1 11 55555555555555 1 111 1 1 11 1 111 11 111 1 1 111 1 1 444444444444444444444444 222 55555555555555555555555555555555555555555555555555555 11 11 1 222222 333333333 1 1 33333 1 1 11111 1 111 11 1 1 66666666666666666666 1 1 22222 22222 11 1 1 2222222 33333 1 1 11 1 1111 1 2222222 11 1 3333333 11 22222 1 11 3333333 5555555555555 2222222 1 1 1 22 11 222 11 1 1 222 1 1111 111 222 111111111111111111111111111111111111111111111111 111111 1111 55555555555 1 111 1 1 222 1 22 8888888888888888888 33333 77777777777777777777777 11111 11 11 222222 3333333 6666666666666666666666 222 2222 1 1 1 1 1 2222 11
lowQualScore : 1 5 1 5 88 5 5 5 88 5 1 111 5 5 5 5 4444 88 5 1 1 111 1 5 1 88 1 1 111 1 88 1 5 999 1 1 77 5 1 5 1 88 111 1 1 1 8888888888888888888888888 1 88 5 5 88 5 5 1 1 1 1 88 000 66666 88 1 88 55555 2 1 111 88 1 1 1 1 77 2222222 1 777777777777 1 1 5 9999999999 5 5 3333333 1 5 1 888888 000 5 2 5 44444 5 1 1 5 0 000 7 3 8888 3 7 5 3 777 0 0 1 0 1 88 5 1 1 88 1 1 1 1 22 66666 1 1 77777 5 1 5 1 5 1 66 1 88 1 2 2 3 3 999999 88 5 33333333333333333333333333 1 88 5 1 1 5 66 1 5 11 0 7 6 00 0 7 1 5 88 22222222222222 3 2 111 0 6 2 0 11 0 3 0 777 44 0 33 333 1 0 0 5 3 0 444 0 0 1 0 555555555555555555555555 7 333 55555555555555555555555555555555555555555555555555555 88 33 0 999 1 777777 444444444 0 7 1 3 6 6 6 1 33333 2 2 44444 3 999 88 3 0 2 99999999999999999999 5 5 55555 77777 1 11 6 3 0 4444444 1 33333 1 1 3 0 0 1 1 0 22 1 0 0 5555 3 3 4 3 1 1111111 88 1 0 11 0 6666666 1 4 22 55555 0 1 4 99 1 99 55 2222222 0 6666666666666 0 0 1 1111111 6 1 9 1 3 0 7 2 0 3 33 88 7 444 88 3 1 1 5 111 5 1 1 1 1 3333 0 3 6 999 0 8 8 555 8 0 777777777777777777777777777777777777777777777777 1 22 77 8 3 22 555555 4444 8 8 77777777777 1 3 5 1 444 333 1 1 11 5 5 0 1 1 333 0 3 00 6 7777777777777777777 1 88888 44 44444444444444444444444 3 66666 88 1 1 7 7 0 44 6 7 999999 2222222 2222222222222222222222 111 4444 1 5 5 1 1 1 5 5 5 22 3333 88
lowQualScore : . . . . .. . . . .. . . ... . . . . .... .. . . . ... . . . .. . . ... . .. . . ... . . .. . . . . .. ... . . . ......................... . .. . . .. . . . . . . .. ... ..... .. . .. ..... . . ... .. . . . . .. ....... . ............ . . . .......... . . ....... . . . ...... ... . . . ..... . . . . . ... . . .... . . . . ... . . . . . .. . . . .. . . . . .. ..... . . ..... . . . . . . .. . .. . . . . . ...... .. . .......................... . .. . . . . .. . . .. . . . .. . . . . .. .............. . . ... . . . . .. . . . ... .. . .. ... . . . . . . ... . . . . ........................ . ... ..................................................... .. .. . ... . ...... ......... . . . . . . . . ..... . . ..... . ... .. . . . .................... . . ..... ..... . .. . . . ....... . ..... . . . . . . . . .. . . . .... . . . . . ....... .. . . .. . ....... . . .. ..... . . . .. . .. .. ....... . ............. . . . ....... . . . . . . . . . . .. .. . ... .. . . . . ... . . . . . .... . . . ... . . . ... . . ................................................ . .. .. . . .. ...... .... . . ........... . . . . ... ... . . .. . . . . . ... . . .. . ................... . ..... .. ....................... . ..... .. . . . . . .. . . ...... ....... ...................... ... .... . . . . . . . . . .. .... ..
lowQualScore : 0 5 0 5 00 5 5 5 55 5 0 555 5 5 0 0 5555 00 5 0 0 000 0 0 0 00 0 0 000 0 00 0 5 000 0 0 55 5 0 5 0 55 555 0 0 0 0000000000000000000000000 0 00 5 0 00 0 5 0 0 0 0 00 555 00000 00 0 00 00000 5 0 555 00 0 0 0 0 55 0000000 0 555555555555 0 0 0 5555555555 5 0 0000000 0 5 0 000000 555 5 5 5 55555 0 0 0 5 7 777 3 3 3333 7 3 5 3 777 7 0 0 0 0 33 0 0 0 00 0 0 0 0 00 55555 0 0 00000 0 0 0 0 5 0 55 0 55 0 0 0 7 7 000000 55 5 00000000000000000000000000 0 00 0 0 0 0 55 0 0 00 7 3 7 77 7 3 0 5 55 00000000000000 3 5 000 0 5 5 0 88 8 2 0 555 00 2 88 555 2 2 8 5 2 0 000 0 0 0 7 333333333333333333333333 3 333 33333333333333333333333333333333333333333333333333333 88 88 0 000 0 555555 222222222 0 3 0 3 7 7 7 0 33333 0 0 33333 3 333 33 3 7 0 00000000000000000000 5 0 55555 00000 0 00 7 3 3 3333333 0 33333 0 0 2 0 0 0 0 2 00 2 0 2 5555 2 2 2 3 0 3333333 33 0 7 22 0 8888888 2 2 55 00000 0 0 2 00 2 88 88 5555555 7 0000000000000 7 7 0 1111111 5 2 0 2 2 0 0 5 0 2 88 33 3 333 33 3 0 0 5 000 5 0 0 0 0 7777 7 7 7 000 7 8 0 000 0 8 444444444444444444444444444444444444444444444444 4 44 22 0 2 44 222222 8888 0 0 66666666666 4 8 0 0 555 555 0 0 00 5 5 2 0 0 333 7 3 00 7 0000000000000000000 0 88888 00 22222222222222222222222 2 00000 00 0 0 3 3 7 77 7 3 000000 5555555 5555555555555555555555 000 0000 0 5 0 0 0 0 5 5 0 00 5555 55
consensus : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCAC--AG--C--T--GT------G-C--CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGGTAA--T----TCGGTT-ATCCA-CGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Reference ( family-1193 ) : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACA--AGCCGCTGTTGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCAC--AG--C--T--GT------G-C--CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGGT----T----TCGGTT-ATCCA-CGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
gi|1 : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTCGGGT--ACTGGCAAGTGGAA--GA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTTA-GGTAATGCCATTTTGGGTTA-T-CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACC-TCTTCTGTAA--GAGCTTCGATCGTTCTTGG-CCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACG-CAGTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAGCATAT--GCAAGTCGA-CCCTCTCCAAAGCATAACAAAAGTAT---GTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCAT-AGC-TCATTGCGC-TGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTTTGATATGAAAATTAAAGCACAGACC-AGGATCTC-GAC-ACCGTAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAAT------GCCGCTGTTGG-------TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAATCGA--TG-TTGAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGAG-----AACCAG--AATAGC-CTGGAATTGTCGTCGGG-GGACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGACGA-----TCTATCT-GTAGACGATG-ACTGATAAAGGAGGGATCCCAACCTCCA---TGC--TATTGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGTA-----AAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATATA-------AGCCGGT-----TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAGAGCACCAAATGCAAGCTCGTGGGG-CTGGAATACCTATGGAACGCATAGGCAATGGATATTGTTTGG-G--GAACTCCCGCGCACGCTGACAGAAACAACAGATATA-TCTTTAGTT-GTTTCTGATTATTTTACCAAATGGGTCGAGG-CATTTGCG-----ATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCAAAAAAG-------TTGTTGCAAGGTTTGGGGTTCCATGTGTCATACATT---CG----GACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTG-GCAAAGTATTGAACATTAATAAGAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGAACGGCATGG--TATGAGCGATTCAATAAGACTTTTGCTA--TC-AATGCTTCGTAACTTGGTGA-CGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCATGT--ACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AAGAG-AAGCT---AG-AAACTGCTCAC--AT--C--TTTGTAAGGCAG-CA-CACAACACAA-GCTATG-TTGA-GACAGAAGACTTTGCACGACGCAGAAACTCTATTG--GC--AA---TCAT-T-CA---TCCCGG-TGATGAAGTTTATGTGTACTTTCCCAGGTATCAGT-CTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTG-AGGCAAAACTA-----TATGAT-TTAACTTACAAAGTTAGA---TGTGGTTCAAAGGGTAATAT----CAAGTT-ATACAGTGTGGACAGAATGCGTCTCAAAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAGAAA-CTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|10 : -TCAAAACAGACCAT-A-CCTCATTG-GTATGACTTCCAAGATTTAAGAACCCGG-AGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAACTTGT---GATTTCAGTATAG-AACACAAACCTAGGA-GTT-AAC-ATTATAACGCAG
gi|11 : ACTGATACA-TCTT--GGTAGGATCAGATCATTTCACTCGATGTTCCGAG------TGTTTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG--AACAAG-------TTATTACACGGTTTGGAGT
gi|12 : aGTG--CAAAGTT--GGGTATAGAAAAAAACTCGCAT-GAAT-CCGT-ACCATCCCCAATC------GCATGACTTGTGAGCGGTTCAATTGCACT----CTAATTCAAATGCTT
gi|13 : AAACTTG-----TGTGGTTTAGAGGGTAAATC----TCAGTTTATCCA-TTTTGTCAGAATGCGTTTTAAAAGGAGG
gi|14 : ccgttgacgaagtttacaattaaatttaCTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTT
gi|15 : ATGCCATTT-GGGATG-TGCAATGCGTCAGCCA-CTTTCGA-GCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|16 : ACGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|17 : tTTGAAAAAGAAAATTCTAATGATTTGATACCAGA--AGCAATAGATCAA
gi|18 : ATCGTTCCTGAGTCTTTGCAGTTACTATCGTCGATTTATCA
gi|2 : ---------------------AGAT---------------------AAAA--GA--CG-TCGAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGAG-----AACA-G--AA--GCTCTGGAATTATTGTCGGAAGGATCGATGCTGAAGTATCTGACATC-CCAGAGAT-ATATTTGAGG-TGAAGGCCCAGGGTGTTTGCTTTTCAGATGATGGGCTGA-A-----GAGATCC-ATCCACCAGACTGC--TGCTGTGCCTTT-CAATGAGGGACGACAT-------ATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATAA-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACTATGAAAGCTCCAA-CAAA-GTTCGTA------GGAG-----ATGG---------------GATACTATTTAGCAAAGGACACCCGCGCAC--CGACAAAAACGTAAGATATA-ATTT--AGTTGTTTCTGATTATTTCACCAAATGGGTCGAGGGCATTTGTT-----AGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGT-TGCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-------CGCTTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAAATGC--ACAATGCTCTGGTTATT-ATAAAGACCCTTATAGGACGCCCTTACCATTGCCTATCAGAT-GGGATGG--TG-GAGCGATTCAATAAGACATC-GCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCAT-CCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAAAAG-AGGCT---AG-AAGCTGTTAAC--AG--C--T--GT------G-C--TAC--------------------GACAGAAGTCTGATC-------AGAAACTCTACTG--AC--AG---TCAT-TCAAAC-CC---GTTGACGAAGTTT
gi|3 : cccAACCGAT-AT-A-C-T-ATTGCAT-TGGTTTT-GAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAA--TATTC-AGTGTGAAAACTGACACACAA-CC-ACACTTTC-GAT-ATAATAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGCACA--AAT-----TCAGG-----GTACAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGTAGAAACACTTTCAGATCTCCAGGG---------------------AAAA-AGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC---------C-CTGGATTTATCATCGGGAAGACCGATGCTGAAGTCTCTGTGCTC-CCAAA-ATCACTTTTGGGGGTAAAGGGTGA-----TCTGCCCCGTAGACAATGAACTGA-AAAAGACAGATCC-ATCCTCTAAGTTACTTTACTGTGCCTTT-CAGTGAGAGACAACATGTACTCAAT
gi|3 : AATATTCTATTGGCCTGGGCTAC-AAAGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCTAAGAGTTCCAA-TGTA-GATCATGTGATCTGGAATACCTATGGAACACATattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcTGTATAAAATAAAT-GAGCC-TGAACAAATTTCTAATAGTTCCAA-TGTA-GCTCATGTGATCTGGAATACCTATGGAACACATAG-CAATGGATCATGC---A-GAAGAACTCCCACGCAC--CAACATAAACAATCGATATAATCT-------GTCTCTGATTGATTCACTGAATGGGTCGAGG-CATTTGTT-----ATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--AAAAG-------TTGTTGCAAGATTTGGAGTTCATTATGTCATA-ATTATATGC--ATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAA-T-TGTACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-ACGCCCT-TCCACCCCTAATTAGA--ncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|4 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaGATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAG-TGTACTGTTAAGTGGCAATGG-GGC------------CTAGATAGCATTCATAACCAAACATAGTCTG-TTCCAGTTTAAGGTAATGTTATTT-GGGTTATT-CAATGTACCAGCGA-TATTCAA-ATGAt
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTTAGACCTTTG---------------------CAG------TTACTATGGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAATT-TCTATCAGTGGT------CACTTATGTTAAACAC-TTTCGACATT--ATC--------------TTTACAA-TGAGAACAGATCATCA-C-TTATTGCGT-TGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAA--TGGTC-AATATAACAATTG-AACACCAACA-CGGCCGTCTGACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTTGGGTGTACATGTAGCAC--TGGAAATGACT---GTTGATGACGTAGCAGAAGA-----GG---------------------AGAGACCCCCTATCTGTTCTTCAGAAAAA-CGA--TG-TTGAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAAA--AC-CTGGAATaggcttttg
gi|6 : TGGGTATGGGGATTGAAAGAG-AAGCT---AA-AAGTTGTCCAC--AG--CTTT--GT------GACTACATAGCACAA-GCTATGCT--GCGACAAAAGTCTCTGCAAGACA-AGAAACTATACTG--GC--AA---TCAT-T-GAA----------------------GTCTATTCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTGG-CAAAACTG-----T--------------CAAATTTA-----TGTGGTTCAA--GGT----T----TACGT---------GTGGACAG-------------AGAAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAGAAAACTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|7 : GACGAAATGTATCTACTCCATTGGATATCATGTATG--AAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAGGAGCAAGCTCACAA-AAGC-GTTCGTCAAA--A--T--G-------------A-AGAGCAT-GCAATGGT--AAGACAAAAGCATTACCATGACA-AAAGATTGAATTG--GGGGAA----CTT-T-AAAGTTA---A-TGATGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCA-AG--AAAA-TGTCAGATGTGACAT------ATCATGTTGTCAATTGTGGTTCACAGGGT----TCTAATCGGGTAATCCA-CGTGGATAGAATGCGGCT--AAAG
gi|8 : AGCGA-CATTTGA-ACGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTc
gi|9 : ATGGGTGTGACAATTGCAAGAT-AGACTTG-AGCAAGCT---CAC--AAAAT--T--GTTC----G-T--CAAAATGCAGTGGTA------A-GACAAAAGCATTACCATGACA-A-AAATTGAATTGAGGG--AACTTTAATGT-AAA--TT-------ATGAGGTGTATGTCTATTTTCC-ACGAACCAAAACGGGACAGTCGCCAAAATTTAC-TAGCTATTGCAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111
lowQualScore : 1 1 11 1 1 1 11 1 222 1 1 1 1 2222 11 1 222 1 11 222 11 1 111 11 1 1 11 222 5555555555555555555555555 11 1 1 11 1 1 11 222 22222 11 11 22222 222 11 11 3333333 444444444444 1 3333333333 1 1 3333333 1 222222 222 1 1 22222 1 1 222 1 1 1 111 1 1 1 11 22222 22222 1 1 1 11 11 1 1 222222 11 1 88888888888888888888888888 11 1 1 11 1 11 111 1 11 55555555555555 1 111 1 1 11 1 111 11 1111 1 111 1 1 55555555555555555555555 222 55555555555555555555555555555555555555555555555555555 11 11 1 222222 3333333 1 1 33333 1 11111 1 111 11 1 1 66666666666666666666 1 1 3333333333333 11 1 1 2222222 33333 1 1 1 11 1 1 2222222 11 1 3333333 11 22222 1 11 3333333 666666666666 2222222 1 1 1 22 11 2222 11 1 1 222 1 111 222 111111111111111111111111111111111111111111111 111111 1111 11 5555555555 1 11111111 1 1 222 222 888888888888888888 33333333 555555555555555 11 11111 11 11 222222 3333333 6666666666666666666666 222 2222 1 1 1 1 1 2222 11
lowQualScore : 1 5 1 5 88 5 5 5 88 5 1 111 5 5 5 5 4444 88 5 1 1 111 1 5 1 88 1 1 111 1 88 1 5 999 1 1 77 5 1 5 1 88 111 1 1 1 8888888888888888888888888 1 88 5 5 88 5 5 1 1 1 1 88 000 66666 88 1 88 55555 2 1 111 88 1 1 1 1 77 2222222 1 777777777777 1 1 5 9999999999 5 5 3333333 1 5 1 888888 000 5 2 5 44444 5 1 1 5 0 000 7 3 8888 3 7 5 3 777 0 0 1 0 1 88 5 1 1 88 1 1 1 1 22 66666 1 1 77777 5 1 5 1 5 1 66 1 88 1 2 2 3 3 999999 88 5 33333333333333333333333333 1 88 5 1 1 5 66 1 5 88 0 0 7 6 999 0 7 1 5 88 22222222222222 3 2 111 0 6 2 0 11 0 3 0 777 44 0 33 0000 1 0 0 777 3 0 444 0 0 1 0 00000000000000000000000 7 333 55555555555555555555555555555555555555555555555555555 88 33 0 999 1 777777 7777777 0 0 7 1 3 6 6 6 1 33333 2 6 44444 3 999 88 3 0 2 99999999999999999999 5 5 2222222222222 1 11 6 3 0 4444444 1 33333 1 1 3 0 0 1 1 0 0 2 11 0 5 33 3 3 4 3 1 1111111 88 1 0 11 0 6666666 1 4 22 55555 0 1 4 99 1 99 55 2222222 0 000000000000 0 0 1 1111111 6 1 9 1 3 0 7 2 0 3 33 88 7 4444 88 3 1 1 5 111 5 1 1 1 1 7 6 0 3 6 999 0 8 8 555 8 0 777777777777777777777777777777777777777777777 1 22 77 8 3 22 555555 4444 8 11 6666666666 1 3 5 1 11111111 1 1 11 5 5 0 1 1 333 0 222 6 6 888888888888888888 1 66666666 44 555555555555555 55 22 3 66666 88 1 1 7 7 0 44 6 7 999999 2222222 2222222222222222222222 111 4444 1 5 5 1 1 1 5 5 5 22 3333 88
lowQualScore : . . . . .. . . . .. . . ... . . . . .... .. . . . ... . . . .. . . ... . .. . . ... . . .. . . . . .. ... . . . ......................... . .. . . .. . . . . . . .. ... ..... .. . .. ..... . . ... .. . . . . .. ....... . ............ . . . .......... . . ....... . . . ...... ... . . . ..... . . . . . ... . . .... . . . . ... . . . . . .. . . . .. . . . . .. ..... . . ..... . . . . . . .. . .. . . . . . ...... .. . .......................... . .. . . . . .. . . .. . . . . ... . . . . .. .............. . . ... . . . . .. . . . ... .. . .. .... . . . ... . . ... . . . . ....................... . ... ..................................................... .. .. . ... . ...... ....... . . . . . . . . . ..... . . ..... . ... .. . . . .................... . . ............. . .. . . . ....... . ..... . . . . . . . . . . .. . . .. . . . . . ....... .. . . .. . ....... . . .. ..... . . . .. . .. .. ....... . ............ . . . ....... . . . . . . . . . . .. .. . .... .. . . . . ... . . . . . . . . . . ... . . . ... . . ............................................. . .. .. . . .. ...... .... . .. .......... . . . . ........ . . .. . . . . . ... . ... . . .................. . ........ .. ............... .. .. . ..... .. . . . . . .. . . ...... ....... ...................... ... .... . . . . . . . . . .. .... ..
lowQualScore : 0 5 0 5 00 5 5 5 55 5 0 555 5 5 0 0 5555 00 5 0 0 000 0 0 0 00 0 0 000 0 00 0 5 000 0 0 55 5 0 5 0 55 555 0 0 0 0000000000000000000000000 0 00 5 0 00 0 5 0 0 0 0 00 555 00000 00 0 00 00000 5 0 555 00 0 0 0 0 55 0000000 0 555555555555 0 0 0 5555555555 5 0 0000000 0 5 0 000000 555 5 5 5 55555 0 0 0 5 7 777 3 3 3333 7 3 5 3 777 7 0 0 0 0 33 0 0 0 00 0 0 0 0 00 55555 0 0 00000 0 0 0 0 5 0 55 0 55 0 0 0 7 7 000000 55 5 00000000000000000000000000 0 00 0 0 0 0 55 0 0 00 7 7 3 7 777 7 3 0 5 55 00000000000000 3 5 000 0 5 5 0 88 8 2 0 555 00 2 88 5555 2 2 8 222 2 0 000 0 0 0 7 00000000000000000000000 3 333 33333333333333333333333333333333333333333333333333333 88 88 0 000 0 555555 0000000 2 0 3 0 3 7 7 7 0 33333 0 7 33333 3 333 33 3 7 0 00000000000000000000 5 0 5555555555555 0 00 7 3 3 3333333 0 33333 0 0 2 0 0 0 0 2 0 0 22 2 5 88 2 2 2 3 0 3333333 33 0 7 22 0 8888888 2 2 55 00000 0 0 2 00 2 88 88 5555555 7 777777777777 7 7 0 1111111 5 2 0 2 2 0 0 5 0 2 88 33 3 0000 33 3 0 0 5 000 5 0 0 0 0 3 7 7 7 7 000 7 8 0 000 0 8 444444444444444444444444444444444444444444444 4 44 22 0 2 44 222222 8888 0 88 8888888888 4 8 0 0 22222222 0 0 00 5 5 2 0 0 333 7 777 7 7 000000000000000000 0 88888888 00 888888888888888 88 00 2 00000 00 0 0 3 3 7 77 7 3 000000 5555555 5555555555555555555555 000 0000 0 5 0 0 0 0 5 5 0 00 5555 55
consensus : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TG-TTCGATATGAAAATTGAAACACAAACC-AGGNCGTC-GACA-TNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGA-----GAACC-G--A--AGC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGAT-CCATCCTCCAGGCTGC--TACTGTGCC-TTTCAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCC-AACGT-AGCTCGTGTGATCTGGAATACCTATGGAACGCATA-GCAATGGATANTGTTTGG-GAAGAACTCCCGCGCA--CCGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGAC-TTCGCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCAC--AG--CTTTGT---G-C----CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-A-GCAAAACTG-----TGTGA------C-TACAAANTT--G-----TGTGGTTCAAAGGG---TAAT-TC---GGTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Reference ( family-1193 ) : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TG-TTCGATATGAAAATTGAAACACAAACC-AGGNCGTC-GACA-TNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGA-----GAACC-G--A--AGC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGAT-CCATCCTCCAGGCTGC--TACTGTGCC-TTTCAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCC-AACGT-AGCTCGTGTGATCTGGAATACCTATGGAACGCATA-GCAATGGATANTGTTTGG-GAAGAACTCCCGCGCA--CCGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGAC-TTCGCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCAC--AG--C--TGT---G-C----CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-A-GCAAAACTG-----TGTGA------C-TACAAANTT--G-----TGTGGTTCAAAGGG---TAAT-TC---GGTTATCCA-CGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
gi|1 : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTCGGGT--ACTGGCAAGTGGAA--GA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTTA-GGTAATGCCATTTTGGGTTA-T-CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACC-TCTTCTGTAA--GAGCTTCGATCGTTCTTGG-CCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACG-CAGTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAG--CATATGCAAGTCG-ACCCTCTCCAAAGCATAACAAAAGTA---TGTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCAT-AGC-TCATTGCGC-TGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTTTGATATGAAAATTAAAGCACAGACC-AGGATCTC-GACA-CCGTAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAAT------GCCGCTGTT--G-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAATCGA--TG-TTGAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGA-----GAACCAG--AATAGC-CTGGAATTGTCGTCGGG-GGACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGACGA-----TCTATCT-GTAGACGAT-GACTGATAAAGGAGGGATCCCAACCTCCA---TGC--TATTGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGT-----AAAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATAT-------AAGCCGGT-----TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAGAGCACCAAATGCAAGCTCGTG-GGGCTGGAATACCTATGGAACGCATAGGCAATGGATATTGTTTGG-G--GAACTCCCGCGCACGCTGACAGAAACAACAGATATA-TCTTTAGTT-GTTTCTGATTATTTTACCAAATGGGTCGAGG-CATTTGCG-----ATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCAAAAAAG-------TTGTTGCAAGGTTTGGGGTTCCATGTGTCATACATT-----C--GGACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTG-GCAAAGTATTGAACATTAATAAGAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGAACGGCATGG--TATGAGCGATTCAATAAGACTTTTGCTA--TC-AATGCTTCGTAACTTGGTG-ACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCA--TGTACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AAGAG-AAGCT---AG-AAACTGCTCAC--AT--CTTTGTAAGG-CAGCACACAACACAA-GCTATG-TTGA-GACAGAAGACTTTGCACGACGCAGAAACTCTATTG--GC--AA---TCAT-T--CA--TCCCGG-TGATGAAGTTTATGTGTACTTTCCCAGGTATC-AGTCTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTG-AGGCAAAACTA-----TATGATTTAACT-TACAAAGTTAGA-----TGTGGTTCAAAGGG---TAATATCA--AGTTATACAGTGTGGACAGAATGCGTCTCAAAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAG-AAACTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|10 : -TCAAAACAGACCAT-A-CCTCATTG-GTATGACTTCCAAGATTTAAGAACCCGG-AGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAACTTG-T--GATTTCAGTATAG-AACACAAACCTAGGA-GTT-AACA-TTATAACGCAG
gi|11 : ACTGATACA-TCTT--GGTAGGATCAGATCATTTCACTCGATGTTCCGAG------TGTTTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG--AACAAG-------TTATTACACGGTTTGGAGT
gi|12 : aGTG--CAAAGTT--GGGTATAGAAAAAAACTCGCAT-GAAT-CCGT-ACCATCCCCAATC------GCATGACTTGTGAGCGGTTCAATTGCAC-T---CTAATTCAAATGCTT
gi|13 : AAACTT--G-----TGTGGTTTAGAGGG---TAAA-TCTCAGTTTATCCA-TTTTGTCAGAATGCGTTTTAAAAGGAGG
gi|14 : ccgttgacgaagtttacaattaaatttaCTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTT
gi|15 : ATGCCATTT-GGGATG-TGCAATGCGTCAGCCA-CTTTCGA-GCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|16 : ACGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|17 : tTTGAAAAAGAAAATTCTAATGATTTGATACCAGA--AGCAATAGATCAA
gi|18 : ATCGTTCCTGAGTCTTTGCAGTTACTATCGTCGATTTATCA
gi|2 : ---------------------AGAT---------------------AAAA--GA--CG-TCGAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGA-----GAACA-G--A--AGCTCTGGAATTATTGTCGGAAGGATCGATGCTGAAGTATCTGACATC-CCAGAGAT-ATATTTGAGG-TGAAGGCCCAGGGTGTTTGCTTTTCAGATGATGGGCTGA-A-----GAGAT-CCATCCACCAGACTGC--TGCTGTGCC-TTTCAATGAGGGACGACAT-------ATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATAA-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACTATGAAAGCTCC-AACAA-AGTTCGTA------GGAG-----ATGG---------------GATACTATTTAGCAAAGGACACCCGCGCA--CCGACAAAAACGTAAGATATA-ATTT--AGTTGTTTCTGATTATTTCACCAAATGGGTCGAGGGCATTTGTT-----AGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGT-TGCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-------CGCTTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAAATGC--ACAATGCTCTGGTTATT-ATAAAGACCCTTATAGGACGCCCTTACCATTGCCTATCAGAT-GGGATGG--TG-GAGCGATTCAATAAGAC-ATCGCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCAT-CCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAAAAG-AGGCT---AG-AAGCTGTTAAC--AG--C--TGT---G-C----TAC--------------------GACAGAAGTCTGATC-------AGAAACTCTACTG--AC--AG---TCAT-TCAAAC-CC---GTTGACGAAGTTT
gi|3 : cccAACCGAT-AT-A-C-T-ATTGCAT-TGGTTTT-GAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAA--TA-TTCAGTGTGAAAACTGACACACAA-CC-ACACTTTC-GATA-TAATAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGCACA--AAT-----TCAGG-----GTACAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGTAGAAACACTTTCAGATCTCCAGGG---------------------AAAA-AGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC---------C-CTGGATTTATCATCGGGAAGACCGATGCTGAAGTCTCTGTGCTC-CCAAA-ATCACTTTTGGGGGTAAAGGGTGA-----TCTGCCCCGTAGACAATGAACTGA-AAAAGACAGAT-CCATCCTCTAAGTTACTTTACTGTGCC-TTTCAGTGAGAGACAACATGTACTCAAT
gi|3 : AATATTCTATTGGCCTGGGCTAC-AAAGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCTAAGAGTTCC-AATGT-AGATCATGTGATCTGGAATACCTATGGAACACATattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcTGTATAAAATAAAT-GAGCC-TGAACAAATTTCTAATAGTTCC-AATGT-AGCTCATGTGATCTGGAATACCTATGGAACACATA-GCAATGGATCATGC---A-GAAGAACTCCCACGCA--CCAACATAAACAATCGATATAATCT-------GTCTCTGATTGATTCACTGAATGGGTCGAGG-CATTTGTT-----ATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--AAAAG-------TTGTTGCAAGATTTGGAGTTCATTATGTCATA-ATTATATGC--ATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAA-T-TGTACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-ACGCCCT-TCCACCCCTAATTAGA--ncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|4 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaGATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAG-TGTACTGTTAAGTGGCAATGG-GGC------------CTAGATAGCATTCATAACCAAACATAGTCTG-TTCCAGTTTAAGGTAATGTTATTT-GGGTTATT-CAATGTACCAGCGA-TATTCAA-ATGAt
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTTAGACCTTTG---------------------CAG------TTACTATGGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAATT-TCTATCAGTGGT------CACTTATGTTAAACACTTT-CGACATTA--TCTTTA--------------CAA-TGAGAACAGATCATCA-C-TTATTGCGT-TGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAA--TG-GTCAATATAACAATTGAA-CACCAACA-CGGCCGTCTGACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTTGGGTGTACATGTAGCAC--TGGAAATGACT---GTTGATGACGTAGCAGAAGA-----GG---------------------AGAGACCCCCTATCTGTTCTTCAGAAAAA-CGA--TG-TTGAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAA--AAC-CTGGAATaggcttttg
gi|6 : TGGGTATGGGGATTGAAAGAG-AAGCT---AA-AAGTTGTCCAC--AG--CTTTGT---GACTA--CATAGCACAA-GCTATGCT--GCGACAAAAGTCTCTGCAAGACA-AGAAACTATACTG--GC--AA---TCAT-T-GAA----------------------GTCTATTCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTG-GCAAAACTG-----T--------------CAAATTT--A-----TGTGGTTCAA--GG---T-----------TTA--CG-TGTGGACAG-------------AGAAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAGAAAACTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|7 : GACGAAATGTATCTACTCCATTGGATATCATGTATG--AAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAGGAGCAAGCTCACAA-AAGC-GTTCGTCAAA--A--TG------------A-AGAGCAT-GCAATGGT--AAGACAAAAGCATTACCATGACA-AAAGATTGAATTG--GGGGAA----CTT-T-AAAGTTA---A-TGATGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCA-A-G-AAAA-TGTCAGATGTGA------CATATCATGTT--GTCAATTGTGGTTCACAGGGTTCTAAT-CG---GGTAATCCA-CGTGGATAGAATGCGGCT--AAAG
gi|8 : AGCGA-CATTTGA-ACGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTc
gi|9 : ATGGGTGTGACAATTGCAAGAT-AGACTTG-AGCAAGCT---CAC--AAAAT--TGTTC-G-T----CAAAATGCAGTGGTA------A-GACAAAAGCATTACCATGACA-A-AAATTGAATTGAGGG--AACTTTAATGT-AAA--TT-------ATGAGGTGTATGTCTATTTTCC-ACGAACCAAAACGGGACAGTCGCCAAAATTTAC-TAGCTATTGCAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111
lowQualScore : 1 1 11 1 1 1 11 1 222 1 1 1 1 2222 11 1 222 1 11 222 11 1 111 11 1 1 11 222 5555555555555555555555555 11 1 1 11 1 1 11 222 22222 11 11 22222 222 11 11 3333333 444444444444 1 3333333333 1 1 3333333 1 222222 222 1 1 22222 1 1 222 1 1 1 111 1 1 1 11 22222 22222 1 1 1 11 11 1 1 222222 11 1 88888888888888888888888888 11 1 1 11 1 11 22 1 11 55555555555555 1 111 1 1 11 1 111 11 111 1 111 1 1 5555555555555555555555 222 55555555555555555555555555555555555555555555555555555 11 11 1 222222 333333333 1 1 33333 1 1 11111 1 111 11 1 1 66666666666666666666 1 1 22222 22222 11 1 1 2222222 33333 1 1 11 1 1111 1 2222222 11 1 3333333 11 22222 1 11 3333333 5555555555555 2222222 1 1 1 22 11 222 11 1 1 222 1 1111 111 222 1111 0000000000000000000000000000000000 111111 1111 55555555555 1 111 1 1 222 1 22 8888888888888888888 33333 5555555555555555 1 11111 11 11 222222 3333333 6666666666666666666666 222 2222 1 1 1 1 1 2222 11
lowQualScore : 1 5 1 5 88 5 5 5 88 5 1 111 5 5 5 5 4444 88 5 1 1 111 1 5 1 88 1 1 111 1 88 1 5 999 1 1 77 5 1 5 1 88 111 1 1 1 8888888888888888888888888 1 88 5 5 88 5 5 1 1 1 1 88 000 66666 88 1 88 55555 2 1 111 88 1 1 1 1 77 2222222 1 777777777777 1 1 5 9999999999 5 5 3333333 1 5 1 888888 000 5 2 5 44444 5 1 1 5 0 000 7 3 8888 3 7 5 3 777 0 0 1 0 1 88 5 1 1 88 1 1 1 1 22 66666 1 1 77777 5 1 5 1 5 1 66 1 88 1 2 2 3 3 999999 88 5 33333333333333333333333333 1 88 5 1 1 5 66 1 5 11 0 7 6 00 0 7 1 5 88 22222222222222 3 2 111 0 6 2 0 11 0 3 0 777 44 0 33 333 1 0 0 777 3 0 444 0 0 1 0 9999999999999999999999 7 333 55555555555555555555555555555555555555555555555555555 88 33 0 999 1 777777 444444444 0 7 1 3 6 6 6 1 33333 2 2 44444 3 999 88 3 0 2 99999999999999999999 5 5 55555 77777 1 11 6 3 0 4444444 1 33333 1 1 3 0 0 1 1 0 22 1 0 0 5555 3 3 4 3 1 1111111 88 1 0 11 0 6666666 1 4 22 55555 0 1 4 99 1 99 55 2222222 0 6666666666666 0 0 1 1111111 6 1 9 1 3 0 7 2 0 3 33 88 7 444 88 3 1 1 5 111 5 1 1 1 1 3333 0 3 6 999 0 8 8 555 8 0 8 7777 1111111111111111111111111111111111 1 22 77 8 3 22 555555 4444 8 8 77777777777 1 3 5 1 444 333 1 1 11 5 5 0 1 1 333 0 3 00 6 7777777777777777777 1 88888 44 5555555555555555 55 0 3 66666 88 1 1 7 7 0 44 6 7 999999 2222222 2222222222222222222222 111 4444 1 5 5 1 1 1 5 5 5 22 3333 88
lowQualScore : . . . . .. . . . .. . . ... . . . . .... .. . . . ... . . . .. . . ... . .. . . ... . . .. . . . . .. ... . . . ......................... . .. . . .. . . . . . . .. ... ..... .. . .. ..... . . ... .. . . . . .. ....... . ............ . . . .......... . . ....... . . . ...... ... . . . ..... . . . . . ... . . .... . . . . ... . . . . . .. . . . .. . . . . .. ..... . . ..... . . . . . . .. . .. . . . . . ...... .. . .......................... . .. . . . . .. . . .. . . . .. . . . . .. .............. . . ... . . . . .. . . . ... .. . .. ... . . . ... . . ... . . . . ...................... . ... ..................................................... .. .. . ... . ...... ......... . . . . . . . . ..... . . ..... . ... .. . . . .................... . . ..... ..... . .. . . . ....... . ..... . . . . . . . . .. . . . .... . . . . . ....... .. . . .. . ....... . . .. ..... . . . .. . .. .. ....... . ............. . . . ....... . . . . . . . . . . .. .. . ... .. . . . . ... . . . . . .... . . . ... . . . ... . . . .... .................................. . .. .. . . .. ...... .... . . ........... . . . . ... ... . . .. . . . . . ... . . .. . ................... . ..... .. ................ .. . . ..... .. . . . . . .. . . ...... ....... ...................... ... .... . . . . . . . . . .. .... ..
lowQualScore : 0 5 0 5 00 5 5 5 55 5 0 555 5 5 0 0 5555 00 5 0 0 000 0 0 0 00 0 0 000 0 00 0 5 000 0 0 55 5 0 5 0 55 555 0 0 0 0000000000000000000000000 0 00 5 0 00 0 5 0 0 0 0 00 555 00000 00 0 00 00000 5 0 555 00 0 0 0 0 55 0000000 0 555555555555 0 0 0 5555555555 5 0 0000000 0 5 0 000000 555 5 5 5 55555 0 0 0 5 7 777 3 3 3333 7 3 5 3 777 7 0 0 0 0 33 0 0 0 00 0 0 0 0 00 55555 0 0 00000 0 0 0 0 5 0 55 0 55 0 0 0 7 7 000000 55 5 00000000000000000000000000 0 00 0 0 0 0 55 0 0 00 7 3 7 77 7 3 0 5 55 00000000000000 3 5 000 0 5 5 0 88 8 2 0 555 00 2 88 555 2 2 8 222 2 0 000 0 0 0 7 3333333333333333333333 3 333 33333333333333333333333333333333333333333333333333333 88 88 0 000 0 555555 222222222 0 3 0 3 7 7 7 0 33333 0 0 33333 3 333 33 3 7 0 00000000000000000000 5 0 55555 00000 0 00 7 3 3 3333333 0 33333 0 0 2 0 0 0 0 2 00 2 0 2 5555 2 2 2 3 0 3333333 33 0 7 22 0 8888888 2 2 55 00000 0 0 2 00 2 88 88 5555555 7 0000000000000 7 7 0 1111111 5 2 0 2 2 0 0 5 0 2 88 33 3 333 33 3 0 0 5 000 5 0 0 0 0 7777 7 7 7 000 7 8 0 000 0 8 0 8888 0000000000000000000000000000000000 4 44 22 0 2 44 222222 8888 0 0 66666666666 4 8 0 0 555 555 0 0 00 5 5 2 0 0 333 7 3 00 7 0000000000000000000 0 88888 00 8888888888888888 88 0 2 00000 00 0 0 3 3 7 77 7 3 000000 5555555 5555555555555555555555 000 0000 0 5 0 0 0 0 5 5 0 00 5555 55
consensus : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GACA-TNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACGCA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGT------G-C--CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG---TAAT-TC---G-GTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Reference ( family-1193 ) : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GACA-TNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACACA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGT------G-C--CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG---TAAT-TC---G-GTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
gi|1 : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTCGGGT--ACTGGCAAGTGGAA--GA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTTA-GGTAATGCCATTTTGGGTTA-T-CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACC-TCTTCTGTAA--GAGCTTCGATCGTTCTTGG-CCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACG-CAGTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAGCATAT--GCAAGTCGA-CCCTCTCCAAAGCATAACAAAAGTAT---GTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCAT-AGC-TCATTGCGC-TGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTTTGATATGAAAATTAAAGCACAGACC-AGGATCTC-GACA-CCGTAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAATGC------CGCTGTTGG-------TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAATCGA--TG-TTGAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGAG-----AACCAG--AATAGC-CTGGAATTGTCGTCGGG-GGACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGACGA-----TCTATCT-GTAGACGATG-ACTGATAAAGGAGGGATCCCAACCTCCA---TGC--TATTGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGTA-----AAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATATA-------AGCCGGT-----TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAGAGCACCAAATGCAAGCTCGTGGGG-CTGGAATACCTATGGAACGCATAGGCAATGGATATTGTTTGG-G--GAACTCCCGCGCACGCTGACAGAAACAACAGATATA-TCTTTAGTT-GTTTCTGATTATTTTACCAAATGGGTCGAGG-CATTTGCG-----ATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCAAAAAAG-------TTGTTGCAAGGTTTGGGGTTCCATGTGTCATACATT---CG----GACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTG-GCAAAGTATTGAACATTAATAAGAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGAACGGCATGG--TATGAGCGATTCAATAAGACTTTTGCTA--TC-AATGCTTCGTAACTTGGTGA-CGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCATGT--ACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AAGAG-AAGCT---AG-AAACTGCTCA-CATCTTTGTAAGGCAG-CA-CACAACACAA-GCTATG-TTGA-GACAGAAGACTTTGCACGACGCAGAAACTCTATTG--GC--AA---TCAT-T-CA---TCCCGG-TGATGAAGTTTATGTGTACTTTCCCAGGTATCAGT-CTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTG-AGGCAAAACTA-----TATGAT-TTAACTTACAAAGTTAGA---TGTGGTTCAAAGGG---TAATATC---AAGTTATACAGTGTGGACAGAATGCGTCTCAAAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAGAAA-CTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|10 : -TCAAAACAGACCAT-A-CCTCATTG-GTATGACTTCCAAGATTTAAGAACCCGG-AGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAACTTGT---GATTTCAGTATAG-AACACAAACCTAGGA-GTT-AACA-TTATAACGCAG
gi|11 : ACTGATACA-TCTT--GGTAGGATCAGATCATTTCACTCGATGTTCCGAG------TGTTTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG--AACAAG-------TTATTACACGGTTTGGAGT
gi|12 : aGTG--CAAAGTT--GGGTATAGAAAAAAACTCGCAT-GAAT-CCGT-ACCATCCCCAATC------GCATGACTTGTGAGCGGTTCAATTGCACT----CTAATTCAAATGCTT
gi|13 : AAACTTG-----TGTGGTTTAGAGGG---TAAA-TCTCAG-TTTATCCA-TTTTGTCAGAATGCGTTTTAAAAGGAGG
gi|14 : ccgttgacgaagtttacaattaaatttaCTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTT
gi|15 : ATGCCATTT-GGGATG-TGCAATGCGTCAGCCA-CTTTCGA-GCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|16 : ACGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|17 : tTTGAAAAAGAAAATTCTAATGATTTGATACCAGA--AGCAATAGATCAA
gi|18 : ATCGTTCCTGAGTCTTTGCAGTTACTATCGTCGATTTATCA
gi|2 : ---------------------AGAT---------------------AAAA--GA--CG-TCGAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGAG-----AACA-G--AA--GCTCTGGAATTATTGTCGGAAGGATCGATGCTGAAGTATCTGACATC-CCAGAGAT-ATATTTGAGG-TGAAGGCCCAGGGTGTTTGCTTTTCAGATGATGGGCTGA-A-----GAGATCC-ATCCACCAGACTGC--TGCTGTGCCTTT-CAATGAGGGACGACAT-------ATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATAA-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACTATGAAAGCTCCAA-CAAA-GTTCGTA------GGAG-----ATGG---------------GATACTATTTAGCAAAGGACACCCGCGCAC--CGACAAAAACGTAAGATATA-ATTT--AGTTGTTTCTGATTATTTCACCAAATGGGTCGAGGGCATTTGTT-----AGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGT-TGCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-------CGCTTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAAATGC--ACAATGCTCTGGTTATT-ATAAAGACCCTTATAGGACGCCCTTACCATTGCCTATCAGAT-GGGATGG--TG-GAGCGATTCAATAAGACATC-GCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCAT-CCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAAAAG-AGGCT---AG-AAGCTGTTAA-CAGC--TGT------G-C--TAC--------------------GACAGAAGTCTGATC-------AGAAACTCTACTG--AC--AG---TCAT-TCAAAC-CC---GTTGACGAAGTTT
gi|3 : cccAACCGAT-AT-A-C-T-ATTGCAT-TGGTTTT-GAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAA--TATTC-AGTGTGAAAACTGACACACAA-CC-ACACTTTC-GATA-TAATAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGCACA--AAT-----TCAGG-----GTACAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGTAGAAACACTTTCAGATCTCCAGGG---------------------AAAA-AGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC---------C-CTGGATTTATCATCGGGAAGACCGATGCTGAAGTCTCTGTGCTC-CCAAA-ATCACTTTTGGGGGTAAAGGGTGA-----TCTGCCCCGTAGACAATGAACTGA-AAAAGACAGATCC-ATCCTCTAAGTTACTTTACTGTGCCTTT-CAGTGAGAGACAACATGTACTCAAT
gi|3 : AATATTCTATTGGCCTGGGCTAC-AAAGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCTAAGAGTTCCAA-TGTA-GATCATGTGATCTGGAATACCTATGGAACACATattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcTGTATAAAATAAAT-GAGCC-TGAACAAATTTCTAATAGTTCCAA-TGTA-GCTCATGTGATCTGGAATACCTATGGAACACATAG-CAATGGATCATGC---A-GAAGAACTCCCACGCAC--CAACATAAACAATCGATATAATCT-------GTCTCTGATTGATTCACTGAATGGGTCGAGG-CATTTGTT-----ATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--AAAAG-------TTGTTGCAAGATTTGGAGTTCATTATGTCATA-ATTATATGC--ATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAA-T-TGTACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-ACGCCCT-TCCACCCCTAATTAGA--ncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|4 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaGATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAG-TGTACTGTTAAGTGGCAATGG-GGC------------CTAGATAGCATTCATAACCAAACATAGTCTG-TTCCAGTTTAAGGTAATGTTATTT-GGGTTATT-CAATGTACCAGCGA-TATTCAA-ATGAt
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTTAGACCTTTG---------------------CAG------TTACTATGGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAATT-TCTATCAGTGGT------CACTTATGTTAAACACTTT-CGACATTA--TCTTTA--------------CAA-TGAGAACAGATCATCA-C-TTATTGCGT-TGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAA--TGGTC-AATATAACAATTGAA-CACCAACA-CGGCCGTCTGACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTTGGGTGTACATGTAGCAC--TGGAAATGACT---GTTGATGACGTAGCAGAAGA-----GG---------------------AGAGACCCCCTATCTGTTCTTCAGAAAAA-CGA--TG-TTGAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAAA--AC-CTGGAATaggcttttg
gi|6 : TGGGTATGGGGATTGAAAGAG-AAGCT---AA-AAGTTGTCCA-CAGCTTTGT------GACTACATAGCACAA-GCTATGCT--GCGACAAAAGTCTCTGCAAGACA-AGAAACTATACTG--GC--AA---TCAT-T-GAA----------------------GTCTATTCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTGG-CAAAACTG-----T--------------CAAATTTA-----TGTGGTTCAA--GG---T------------TTA--CG-TGTGGACAG-------------AGAAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAGAAAACTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|7 : GACGAAATGTATCTACTCCATTGGATATCATGTATG--AAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAGGAGCAAGCTCACAA-AAGC-GTTCGTCAAA---AT------G-----A-AGAGCAT-GCAATGGT--AAGACAAAAGCATTACCATGACA-AAAGATTGAATTG--GGGGAA----CTT-T-AAAGTTA---A-TGATGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCA-AG--AAAA-TGTCAGATGTGACAT------ATCATGTTGTCAATTGTGGTTCACAGGGTTCTAAT-CG---G-GTAATCCA-CGTGGATAGAATGCGGCT--AAAG
gi|8 : AGCGA-CATTTGA-ACGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTc
gi|9 : ATGGGTGTGACAATTGCAAGAT-AGACTTG-AGCAAGCT---CA-CAAAATTGTTC----G-T--CAAAATGCAGTGGTA------A-GACAAAAGCATTACCATGACA-A-AAATTGAATTGAGGG--AACTTTAATGT-AAA--TT-------ATGAGGTGTATGTCTATTTTCC-ACGAACCAAAACGGGACAGTCGCCAAAATTTAC-TAGCTATTGCAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111
lowQualScore : 1 1 11 1 1 1 11 1 222 1 1 1 1 2222 11 1 222 1 11 222 11 1 111 11 1 1 11 222 5555555555555555555555555 11 1 1 11 1 1 11 222 22222 11 11 22222 222 11 11 3333333 444444444444 1 3333333333 1 1 3333333 1 222222 222 1 1 22222 1 1 222 1 1 1 111 1 1 1 11 22222 22222 1 1 1 11 11 1 1 222222 11 1 88888888888888888888888888 11 1 1 11 1 11 22 1 11 55555555555555 1 111 1 1 11 1 111 11 111 1 1 111 1 1 5555555555555555555555 222 55555555555555555555555555555555555555555555555555555 11 11 1 222222 333333333 1 1 33333 1 1 11111 1 111 11 1 1 66666666666666666666 1 1 22222 22222 11 1 1 2222222 33333 1 1 11 1 1111 1 2222222 11 1 3333333 11 22222 1 11 3333333 5555555555555 2222222 1 1 1 22 11 222 11 1 1 222 1 1111 111 222 1111 0000000000000000000000000000000000 111111 1111 55555555555 1 111 1 1 222 1 22 8888888888888888888 33333 5555555555555555 1 11111 11 11 222222 3333333 6666666666666666666666 222 2222 1 1 1 1 1 2222 11
lowQualScore : 1 5 1 5 88 5 5 5 88 5 1 111 5 5 5 5 4444 88 5 1 1 111 1 5 1 88 1 1 111 1 88 1 5 999 1 1 77 5 1 5 1 88 111 1 1 1 8888888888888888888888888 1 88 5 5 88 5 5 1 1 1 1 88 000 66666 88 1 88 55555 2 1 111 88 1 1 1 1 77 2222222 1 777777777777 1 1 5 9999999999 5 5 3333333 1 5 1 888888 000 5 2 5 44444 5 1 1 5 0 000 7 3 8888 3 7 5 3 777 0 0 1 0 1 88 5 1 1 88 1 1 1 1 22 66666 1 1 77777 5 1 5 1 5 1 66 1 88 1 2 2 3 3 999999 88 5 33333333333333333333333333 1 88 5 1 1 5 66 1 5 11 0 7 6 00 0 7 1 5 88 22222222222222 3 2 111 0 6 2 0 11 0 3 0 777 44 0 33 333 1 0 0 5 3 0 444 0 0 1 0 0 9999999999999999999999 7 333 55555555555555555555555555555555555555555555555555555 88 33 0 999 1 777777 444444444 0 7 1 3 6 6 6 1 33333 2 2 44444 3 999 88 3 0 2 99999999999999999999 5 5 55555 77777 1 11 6 3 0 4444444 1 33333 1 1 3 0 0 1 1 0 22 1 0 0 5555 3 3 4 3 1 1111111 88 1 0 11 0 6666666 1 4 22 55555 0 1 4 99 1 99 55 2222222 0 6666666666666 0 0 1 1111111 6 1 9 1 3 0 7 2 0 3 33 88 7 444 88 3 1 1 5 111 5 1 1 1 1 3333 0 3 6 999 0 8 8 555 8 0 8 7777 1111111111111111111111111111111111 1 22 77 8 3 22 555555 4444 8 8 77777777777 1 3 5 1 444 333 1 1 11 5 5 0 1 1 333 0 3 00 6 7777777777777777777 1 88888 44 5555555555555555 55 0 3 66666 88 1 1 7 7 0 44 6 7 999999 2222222 2222222222222222222222 111 4444 1 5 5 1 1 1 5 5 5 22 3333 88
lowQualScore : . . . . .. . . . .. . . ... . . . . .... .. . . . ... . . . .. . . ... . .. . . ... . . .. . . . . .. ... . . . ......................... . .. . . .. . . . . . . .. ... ..... .. . .. ..... . . ... .. . . . . .. ....... . ............ . . . .......... . . ....... . . . ...... ... . . . ..... . . . . . ... . . .... . . . . ... . . . . . .. . . . .. . . . . .. ..... . . ..... . . . . . . .. . .. . . . . . ...... .. . .......................... . .. . . . . .. . . .. . . . .. . . . . .. .............. . . ... . . . . .. . . . ... .. . .. ... . . . . . . ... . . . . . ...................... . ... ..................................................... .. .. . ... . ...... ......... . . . . . . . . ..... . . ..... . ... .. . . . .................... . . ..... ..... . .. . . . ....... . ..... . . . . . . . . .. . . . .... . . . . . ....... .. . . .. . ....... . . .. ..... . . . .. . .. .. ....... . ............. . . . ....... . . . . . . . . . . .. .. . ... .. . . . . ... . . . . . .... . . . ... . . . ... . . . .... .................................. . .. .. . . .. ...... .... . . ........... . . . . ... ... . . .. . . . . . ... . . .. . ................... . ..... .. ................ .. . . ..... .. . . . . . .. . . ...... ....... ...................... ... .... . . . . . . . . . .. .... ..
lowQualScore : 0 5 0 5 00 5 5 5 55 5 0 555 5 5 0 0 5555 00 5 0 0 000 0 0 0 00 0 0 000 0 00 0 5 000 0 0 55 5 0 5 0 55 555 0 0 0 0000000000000000000000000 0 00 5 0 00 0 5 0 0 0 0 00 555 00000 00 0 00 00000 5 0 555 00 0 0 0 0 55 0000000 0 555555555555 0 0 0 5555555555 5 0 0000000 0 5 0 000000 555 5 5 5 55555 0 0 0 5 7 777 3 3 3333 7 3 5 3 777 7 0 0 0 0 33 0 0 0 00 0 0 0 0 00 55555 0 0 00000 0 0 0 0 5 0 55 0 55 0 0 0 7 7 000000 55 5 00000000000000000000000000 0 00 0 0 0 0 55 0 0 00 7 3 7 77 7 3 0 5 55 00000000000000 3 5 000 0 5 5 0 88 8 2 0 555 00 2 88 555 2 2 8 5 2 0 000 0 0 0 7 7 3333333333333333333333 3 333 33333333333333333333333333333333333333333333333333333 88 88 0 000 0 555555 222222222 0 3 0 3 7 7 7 0 33333 0 0 33333 3 333 33 3 7 0 00000000000000000000 5 0 55555 00000 0 00 7 3 3 3333333 0 33333 0 0 2 0 0 0 0 2 00 2 0 2 5555 2 2 2 3 0 3333333 33 0 7 22 0 8888888 2 2 55 00000 0 0 2 00 2 88 88 5555555 7 0000000000000 7 7 0 1111111 5 2 0 2 2 0 0 5 0 2 88 33 3 333 33 3 0 0 5 000 5 0 0 0 0 7777 7 7 7 000 7 8 0 000 0 8 0 8888 0000000000000000000000000000000000 4 44 22 0 2 44 222222 8888 0 0 66666666666 4 8 0 0 555 555 0 0 00 5 5 2 0 0 333 7 3 00 7 0000000000000000000 0 88888 00 8888888888888888 88 0 2 00000 00 0 0 3 3 7 77 7 3 000000 5555555 5555555555555555555555 000 0000 0 5 0 0 0 0 5 5 0 00 5555 55
consensus : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACGCA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGT------G-C--CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG---TAAT-TC---G-GTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Reference ( family-1193 ) : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACGCA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGT------G-C--CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG---TAAT-TC---G-GTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
gi|1 : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTCGGGT--ACTGGCAAGTGGAA--GA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTTA-GGTAATGCCATTTTGGGTTA-T-CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACC-TCTTCTGTAA--GAGCTTCGATCGTTCTTGG-CCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACG-CAGTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAGCATAT--GCAAGTCGA-CCCTCTCCAAAGCATAACAAAAGTAT---GTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCAT-AGC-TCATTGCGC-TGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTTTGATATGAAAATTAAAGCACAGACC-AGGATCTC-GAC-ACCGTAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAATGC------CGCTGTTGG-------TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAATCGA--TG-TTGAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGAG-----AACCAG--AATAGC-CTGGAATTGTCGTCGGG-GGACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGACGA-----TCTATCT-GTAGACGATG-ACTGATAAAGGAGGGATCCCAACCTCCA---TGC--TATTGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGTA-----AAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATATA-------AGCCGGT-----TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAGAGCACCAAATGCAAGCTCGTGGGG-CTGGAATACCTATGGAACGCATAGGCAATGGATATTGTTTGG-G--GAACTCCCGCGCACGCTGACAGAAACAACAGATATA-TCTTTAGTT-GTTTCTGATTATTTTACCAAATGGGTCGAGG-CATTTGCG-----ATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCAAAAAAG-------TTGTTGCAAGGTTTGGGGTTCCATGTGTCATACATT---CG----GACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTG-GCAAAGTATTGAACATTAATAAGAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGAACGGCATGG--TATGAGCGATTCAATAAGACTTTTGCTA--TC-AATGCTTCGTAACTTGGTGA-CGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCATGT--ACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AAGAG-AAGCT---AG-AAACTGCTCA-CATCTTTGTAAGGCAG-CA-CACAACACAA-GCTATG-TTGA-GACAGAAGACTTTGCACGACGCAGAAACTCTATTG--GC--AA---TCAT-T-CA---TCCCGG-TGATGAAGTTTATGTGTACTTTCCCAGGTATCAGT-CTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTG-AGGCAAAACTA-----TATGAT-TTAACTTACAAAGTTAGA---TGTGGTTCAAAGGG---TAATATC---AAGTTATACAGTGTGGACAGAATGCGTCTCAAAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAGAAA-CTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|10 : -TCAAAACAGACCAT-A-CCTCATTG-GTATGACTTCCAAGATTTAAGAACCCGG-AGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAACTTGT---GATTTCAGTATAG-AACACAAACCTAGGA-GTT-AAC-ATTATAACGCAG
gi|11 : ACTGATACA-TCTT--GGTAGGATCAGATCATTTCACTCGATGTTCCGAG------TGTTTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG--AACAAG-------TTATTACACGGTTTGGAGT
gi|12 : aGTG--CAAAGTT--GGGTATAGAAAAAAACTCGCAT-GAAT-CCGT-ACCATCCCCAATC------GCATGACTTGTGAGCGGTTCAATTGCACT----CTAATTCAAATGCTT
gi|13 : AAACTTG-----TGTGGTTTAGAGGG---TAAA-TCTCAG-TTTATCCA-TTTTGTCAGAATGCGTTTTAAAAGGAGG
gi|14 : ccgttgacgaagtttacaattaaatttaCTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTT
gi|15 : ATGCCATTT-GGGATG-TGCAATGCGTCAGCCA-CTTTCGA-GCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|16 : ACGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|17 : tTTGAAAAAGAAAATTCTAATGATTTGATACCAGA--AGCAATAGATCAA
gi|18 : ATCGTTCCTGAGTCTTTGCAGTTACTATCGTCGATTTATCA
gi|2 : ---------------------AGAT---------------------AAAA--GA--CG-TCGAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGAG-----AACA-G--AA--GCTCTGGAATTATTGTCGGAAGGATCGATGCTGAAGTATCTGACATC-CCAGAGAT-ATATTTGAGG-TGAAGGCCCAGGGTGTTTGCTTTTCAGATGATGGGCTGA-A-----GAGATCC-ATCCACCAGACTGC--TGCTGTGCCTTT-CAATGAGGGACGACAT-------ATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATAA-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACTATGAAAGCTCCAA-CAAA-GTTCGTA------GGAG-----ATGG---------------GATACTATTTAGCAAAGGACACCCGCGCAC--CGACAAAAACGTAAGATATA-ATTT--AGTTGTTTCTGATTATTTCACCAAATGGGTCGAGGGCATTTGTT-----AGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGT-TGCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-------CGCTTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAAATGC--ACAATGCTCTGGTTATT-ATAAAGACCCTTATAGGACGCCCTTACCATTGCCTATCAGAT-GGGATGG--TG-GAGCGATTCAATAAGACATC-GCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCAT-CCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAAAAG-AGGCT---AG-AAGCTGTTAA-CAGC--TGT------G-C--TAC--------------------GACAGAAGTCTGATC-------AGAAACTCTACTG--AC--AG---TCAT-TCAAAC-CC---GTTGACGAAGTTT
gi|3 : cccAACCGAT-AT-A-C-T-ATTGCAT-TGGTTTT-GAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAA--TATTC-AGTGTGAAAACTGACACACAA-CC-ACACTTTC-GAT-ATAATAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGCACA--AAT-----TCAGG-----GTACAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGTAGAAACACTTTCAGATCTCCAGGG---------------------AAAA-AGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC---------C-CTGGATTTATCATCGGGAAGACCGATGCTGAAGTCTCTGTGCTC-CCAAA-ATCACTTTTGGGGGTAAAGGGTGA-----TCTGCCCCGTAGACAATGAACTGA-AAAAGACAGATCC-ATCCTCTAAGTTACTTTACTGTGCCTTT-CAGTGAGAGACAACATGTACTCAAT
gi|3 : AATATTCTATTGGCCTGGGCTAC-AAAGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCTAAGAGTTCCAA-TGTA-GATCATGTGATCTGGAATACCTATGGAACACATattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcTGTATAAAATAAAT-GAGCC-TGAACAAATTTCTAATAGTTCCAA-TGTA-GCTCATGTGATCTGGAATACCTATGGAACACATAG-CAATGGATCATGC---A-GAAGAACTCCCACGCAC--CAACATAAACAATCGATATAATCT-------GTCTCTGATTGATTCACTGAATGGGTCGAGG-CATTTGTT-----ATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--AAAAG-------TTGTTGCAAGATTTGGAGTTCATTATGTCATA-ATTATATGC--ATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAA-T-TGTACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-ACGCCCT-TCCACCCCTAATTAGA--ncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|4 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaGATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAG-TGTACTGTTAAGTGGCAATGG-GGC------------CTAGATAGCATTCATAACCAAACATAGTCTG-TTCCAGTTTAAGGTAATGTTATTT-GGGTTATT-CAATGTACCAGCGA-TATTCAA-ATGAt
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTTAGACCTTTG---------------------CAG------TTACTATGGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAATT-TCTATCAGTGGT------CACTTATGTTAAACACTTT-CGACATTA--TCTTTA--------------CAA-TGAGAACAGATCATCA-C-TTATTGCGT-TGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAA--TGGTC-AATATAACAATTG-AACACCAACA-CGGCCGTCTGACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTTGGGTGTACATGTAGCAC--TGGAAATGACT---GTTGATGACGTAGCAGAAGA-----GG---------------------AGAGACCCCCTATCTGTTCTTCAGAAAAA-CGA--TG-TTGAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAAA--AC-CTGGAATaggcttttg
gi|6 : TGGGTATGGGGATTGAAAGAG-AAGCT---AA-AAGTTGTCCA-CAGCTTTGT------GACTACATAGCACAA-GCTATGCT--GCGACAAAAGTCTCTGCAAGACA-AGAAACTATACTG--GC--AA---TCAT-T-GAA----------------------GTCTATTCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTGG-CAAAACTG-----T--------------CAAATTTA-----TGTGGTTCAA--GG---T------------TTA--CG-TGTGGACAG-------------AGAAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAGAAAACTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|7 : GACGAAATGTATCTACTCCATTGGATATCATGTATG--AAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAGGAGCAAGCTCACAA-AAGC-GTTCGTCAAA---AT------G-----A-AGAGCAT-GCAATGGT--AAGACAAAAGCATTACCATGACA-AAAGATTGAATTG--GGGGAA----CTT-T-AAAGTTA---A-TGATGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCA-AG--AAAA-TGTCAGATGTGACAT------ATCATGTTGTCAATTGTGGTTCACAGGGTTCTAAT-CG---G-GTAATCCA-CGTGGATAGAATGCGGCT--AAAG
gi|8 : AGCGA-CATTTGA-ACGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTc
gi|9 : ATGGGTGTGACAATTGCAAGAT-AGACTTG-AGCAAGCT---CA-CAAAATTGTTC----G-T--CAAAATGCAGTGGTA------A-GACAAAAGCATTACCATGACA-A-AAATTGAATTGAGGG--AACTTTAATGT-AAA--TT-------ATGAGGTGTATGTCTATTTTCC-ACGAACCAAAACGGGACAGTCGCCAAAATTTAC-TAGCTATTGCAG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111
lowQualScore : 1 1 11 1 1 1 11 1 222 1 1 1 1 2222 11 1 222 1 11 222 11 1 111 11 1 1 11 222 5555555555555555555555555 11 1 1 11 1 1 11 222 22222 11 11 22222 222 11 11 3333333 444444444444 1 3333333333 1 1 3333333 1 222222 222 1 1 22222 1 1 222 1 1 1 111 1 1 1 11 22222 22222 1 1 1 11 11 1 1 222222 11 1 88888888888888888888888888 11 1 1 11 1 11 22 1 11 55555555555555 1 111 1 1 11 1 111 11 111 1 1 111 1 1 5555555555555555555555 222 55555555555555555555555555555555555555555555555555555 11 11 1 222222 333333333 1 1 33333 1 1 11111 1 111 11 1 1 66666666666666666666 1 1 22222 22222 11 1 1 2222222 33333 1 1 11 1 1111 1 2222222 11 1 3333333 11 22222 1 11 3333333 5555555555555 2222222 1 1 1 22 11 222 11 1 1 222 1 1111 111 222 1111 0000000000000000000000000000000000 111111 1111 55555555555 1 111 1 1 222 1 22 8888888888888888888 33333 5555555555555555 1 11111 11 11 222222 3333333 6666666666666666666666 222 2222 1 1 1 1 1 2222 11
lowQualScore : 1 5 1 5 88 5 5 5 88 5 1 111 5 5 5 5 4444 88 5 1 1 111 1 5 1 88 1 1 111 1 88 1 5 999 1 1 77 5 1 5 1 88 111 1 1 1 8888888888888888888888888 1 88 5 5 88 5 5 1 1 1 1 88 000 66666 88 1 88 55555 2 1 111 88 1 1 1 1 77 2222222 1 777777777777 1 1 5 9999999999 5 5 3333333 1 5 1 888888 000 5 2 5 44444 5 1 1 5 0 000 7 3 8888 3 7 5 3 777 0 0 1 0 1 88 5 1 1 88 1 1 1 1 22 66666 1 1 77777 5 1 5 1 5 1 66 1 88 1 2 2 3 3 999999 88 5 33333333333333333333333333 1 88 5 1 1 5 66 1 5 11 0 7 6 00 0 7 1 5 88 22222222222222 3 2 111 0 6 2 0 11 0 3 0 777 44 0 33 333 1 0 0 5 3 0 444 0 0 1 0 0 9999999999999999999999 7 333 55555555555555555555555555555555555555555555555555555 88 33 0 999 1 777777 444444444 0 7 1 3 6 6 6 1 33333 2 2 44444 3 999 88 3 0 2 99999999999999999999 5 5 55555 77777 1 11 6 3 0 4444444 1 33333 1 1 3 0 0 1 1 0 22 1 0 0 5555 3 3 4 3 1 1111111 88 1 0 11 0 6666666 1 4 22 55555 0 1 4 99 1 99 55 2222222 0 6666666666666 0 0 1 1111111 6 1 9 1 3 0 7 2 0 3 33 88 7 444 88 3 1 1 5 111 5 1 1 1 1 3333 0 3 6 999 0 8 8 555 8 0 8 7777 1111111111111111111111111111111111 1 22 77 8 3 22 555555 4444 8 8 77777777777 1 3 5 1 444 333 1 1 11 5 5 0 1 1 333 0 3 00 6 7777777777777777777 1 88888 44 5555555555555555 55 0 3 66666 88 1 1 7 7 0 44 6 7 999999 2222222 2222222222222222222222 111 4444 1 5 5 1 1 1 5 5 5 22 3333 88
lowQualScore : . . . . .. . . . .. . . ... . . . . .... .. . . . ... . . . .. . . ... . .. . . ... . . .. . . . . .. ... . . . ......................... . .. . . .. . . . . . . .. ... ..... .. . .. ..... . . ... .. . . . . .. ....... . ............ . . . .......... . . ....... . . . ...... ... . . . ..... . . . . . ... . . .... . . . . ... . . . . . .. . . . .. . . . . .. ..... . . ..... . . . . . . .. . .. . . . . . ...... .. . .......................... . .. . . . . .. . . .. . . . .. . . . . .. .............. . . ... . . . . .. . . . ... .. . .. ... . . . . . . ... . . . . . ...................... . ... ..................................................... .. .. . ... . ...... ......... . . . . . . . . ..... . . ..... . ... .. . . . .................... . . ..... ..... . .. . . . ....... . ..... . . . . . . . . .. . . . .... . . . . . ....... .. . . .. . ....... . . .. ..... . . . .. . .. .. ....... . ............. . . . ....... . . . . . . . . . . .. .. . ... .. . . . . ... . . . . . .... . . . ... . . . ... . . . .... .................................. . .. .. . . .. ...... .... . . ........... . . . . ... ... . . .. . . . . . ... . . .. . ................... . ..... .. ................ .. . . ..... .. . . . . . .. . . ...... ....... ...................... ... .... . . . . . . . . . .. .... ..
lowQualScore : 0 5 0 5 00 5 5 5 55 5 0 555 5 5 0 0 5555 00 5 0 0 000 0 0 0 00 0 0 000 0 00 0 5 000 0 0 55 5 0 5 0 55 555 0 0 0 0000000000000000000000000 0 00 5 0 00 0 5 0 0 0 0 00 555 00000 00 0 00 00000 5 0 555 00 0 0 0 0 55 0000000 0 555555555555 0 0 0 5555555555 5 0 0000000 0 5 0 000000 555 5 5 5 55555 0 0 0 5 7 777 3 3 3333 7 3 5 3 777 7 0 0 0 0 33 0 0 0 00 0 0 0 0 00 55555 0 0 00000 0 0 0 0 5 0 55 0 55 0 0 0 7 7 000000 55 5 00000000000000000000000000 0 00 0 0 0 0 55 0 0 00 7 3 7 77 7 3 0 5 55 00000000000000 3 5 000 0 5 5 0 88 8 2 0 555 00 2 88 555 2 2 8 5 2 0 000 0 0 0 7 7 3333333333333333333333 3 333 33333333333333333333333333333333333333333333333333333 88 88 0 000 0 555555 222222222 0 3 0 3 7 7 7 0 33333 0 0 33333 3 333 33 3 7 0 00000000000000000000 5 0 55555 00000 0 00 7 3 3 3333333 0 33333 0 0 2 0 0 0 0 2 00 2 0 2 5555 2 2 2 3 0 3333333 33 0 7 22 0 8888888 2 2 55 00000 0 0 2 00 2 88 88 5555555 7 0000000000000 7 7 0 1111111 5 2 0 2 2 0 0 5 0 2 88 33 3 333 33 3 0 0 5 000 5 0 0 0 0 7777 7 7 7 000 7 8 0 000 0 8 0 8888 0000000000000000000000000000000000 4 44 22 0 2 44 222222 8888 0 0 66666666666 4 8 0 0 555 555 0 0 00 5 5 2 0 0 333 7 3 00 7 0000000000000000000 0 88888 00 8888888888888888 88 0 2 00000 00 0 0 3 3 7 77 7 3 000000 5555555 5555555555555555555555 000 0000 0 5 0 0 0 0 5 5 0 00 5555 55
consensus : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACGCA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGT------G-C--CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG---TAAT-TC---G-GTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Reference ( family-1193 ) : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACGCA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGT------G-C--CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG---TAAT-TC---G-GTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
gi|1 : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTCGGGT--ACTGGCAAGTGGAA--GA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTTA-GGTAATGCCATTTTGGGTTA-T-CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACC-TCTTCTGTAA--GAGCTTCGATCGTTCTTGG-CCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACG-CAGTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAGCATAT--GCAAGTCGA-CCCTCTCCAAAGCATAACAAAAGTAT---GTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCAT-AGC-TCATTGCGC-TGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTTTGATATGAAAATTAAAGCACAGACC-AGGATCTC-GAC-ACCGTAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAATGC------CGCTGTTGG-------TGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAATCGA--TG-TTGAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGAG-----AACCAG--AATAGC-CTGGAATTGTCGTCGGG-GGACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGACGA-----TCTATCT-GTAGACGATG-ACTGATAAAGGAGGGATCCCAACCTCCA---TGC--TATTGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGTA-----AAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATATA-------AGCCGGT-----TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAGAGCACCAAATGCAAGCTCGTGGGG-CTGGAATACCTATGGAACGCATAGGCAATGGATATTGTTTGG-G--GAACTCCCGCGCACGCTGACAGAAACAACAGATATA-TCTTTAGTT-GTTTCTGATTATTTTACCAAATGGGTCGAGG-CATTTGCG-----ATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCAAAAAAG-------TTGTTGCAAGGTTTGGGGTTCCATGTGTCATACATT---CG----GACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTG-GCAAAGTATTGAACATTAATAAGAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGAACGGCATGG--TATGAGCGATTCAATAAGACTTTTGCTA--TC-AATGCTTCGTAACTTGGTGA-CGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCATGT--ACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AAGAG-AAGCT---AG-AAACTGCTCA-CATCTTTGTAAGGCAG-CA-CACAACACAA-GCTATG-TTGA-GACAGAAGACTTTGCACGACGCAGAAACTCTATTG--GC--AA---TCAT-T-CA---TCCCGG-TGATGAAGTTTATGTGTACTTTCCCAGGTATCAGT-CTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTG-AGGCAAAACTA-----TATGAT-TTAACTTACAAAGTTAGA---TGTGGTTCAAAGGG---TAATATC---AAGTTATACAGTGTGGACAGAATGCGTCTCAAAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAGAAA-CTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|10 : -TCAAAACAGACCAT-A-CCTCATTG-GTATGACTTCCAAGATTTAAGAACCCGG-AGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAACTTGT---GATTTCAGTATAG-AACACAAACCTAGGA-GTT-AAC-ATTATAACGCAG
gi|11 : ACTGATACA-TCTT--GGTAGGATCAGATCATTTCACTCGATGTTCCGAG------TGTTTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG--AACAAG-------TTATTACACGGTTTGGAGT
gi|12 : aGTG--CAAAGTT--GGGTATAGAAAAAAACTCGCAT-GAAT-CCGT-ACCATCCCCAATC------GCATGACTTGTGAGCGGTTCAATTGCACT----CTAATTCAAATGCTT
gi|13 : AAACTTG-----TGTGGTTTAGAGGG---TAAA-TCTCAG-TTTATCCA-TTTTGTCAGAATGCGTTTTAAAAGGAGG
gi|14 : ccgttgacgaagtttacaattaaatttaCTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTT
gi|15 : ATGCCATTT-GGGATG-TGCAATGCGTCAGCCA-CTTTCGA-GCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|16 : ACGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|17 : tTTGAAAAAGAAAATTCTAATGATTTGATACCAGA--AGCAATAGATCAA
gi|18 : ATCGTTCCTGAGTCTTTGCAGTTACTATCGTCGATTTATCA
gi|2 : ---------------------AGAT---------------------AAAA--GA--CG-TCGAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGAG-----AACA-G--AA--GCTCTGGAATTATTGTCGGAAGGATCGATGCTGAAGTATCTGACATC-CCAGAGAT-ATATTTGAGG-TGAAGGCCCAGGGTGTTTGCTTTTCAGATGATGGGCTGA-A-----GAGATCC-ATCCACCAGACTGC--TGCTGTGCCTTT-CAATGAGGGACGACAT-------ATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATAA-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACTATGAAAGCTCCAA-CAAA-GTTCGTA------GGAG-----ATGG---------------GATACTATTTAGCAAAGGACACCCGCGCAC--CGACAAAAACGTAAGATATA-ATTT--AGTTGTTTCTGATTATTTCACCAAATGGGTCGAGGGCATTTGTT-----AGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGT-TGCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-------CGCTTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAAATGC--ACAATGCTCTGGTTATT-ATAAAGACCCTTATAGGACGCCCTTACCATTGCCTATCAGAT-GGGATGG--TG-GAGCGATTCAATAAGACATC-GCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCAT-CCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAAAAG-AGGCT---AG-AAGCTGTTAA-CAGC--TGT------G-C--TAC--------------------GACAGAAGTCTGATC-------AGAAACTCTACTG--AC--AG---TCAT-TCAAAC-CC---GTTGACGAAGTTT
gi|3 : cccAACCGAT-AT-A-C-T-ATTGCAT-TGGTTTT-GAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAA--TATTC-AGTGTGAAAACTGACACACAA-CC-ACACTTTC-GAT-ATAATAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGCACA--AAT-----TCAGG-----GTACAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGTAGAAACACTTTCAGATCTCCAGGG---------------------AAAA-AGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC---------C-CTGGATTTATCATCGGGAAGACCGATGCTGAAGTCTCTGTGCTC-CCAAA-ATCACTTTTGGGGGTAAAGGGTGA-----TCTGCCCCGTAGACAATGAACTGA-AAAAGACAGATCC-ATCCTCTAAGTTACTTTACTGTGCCTTT-CAGTGAGAGACAACATGTACTCAAT
gi|3 : AATATTCTATTGGCCTGGGCTAC-AAAGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCTAAGAGTTCCAA-TGTA-GATCATGTGATCTGGAATACCTATGGAACACATattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcTGTATAAAATAAAT-GAGCC-TGAACAAATTTCTAATAGTTCCAA-TGTA-GCTCATGTGATCTGGAATACCTATGGAACACATAG-CAATGGATCATGC---A-GAAGAACTCCCACGCAC--CAACATAAACAATCGATATAATCT-------GTCTCTGATTGATTCACTGAATGGGTCGAGG-CATTTGTT-----ATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--AAAAG-------TTGTTGCAAGATTTGGAGTTCATTATGTCATA-ATTATATGC--ATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAA-T-TGTACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-ACGCCCT-TCCACCCCTAATTAGA--ncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|4 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaGATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAG-TGTACTGTTAAGTGGCAATGG-GGC------------CTAGATAGCATTCATAACCAAACATAGTCTG-TTCCAGTTTAAGGTAATGTTATTT-GGGTTATT-CAATGTACCAGCGA-TATTCAA-ATGAt
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTTAGACCTTTG---------------------CAG------TTACTATGGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAATT-TCTATCAGTGGT------CACTTATGTTAAACACTTT-CGACATTA--TCTTTA--------------CAA-TGAGAACAGATCATCA-C-TTATTGCGT-TGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAA--TGGTC-AATATAACAATTG-AACACCAACA-CGGCCGTCTGACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTTGGGTGTACATGTAGCAC--TGGAAATGACT---GTTGATGACGTAGCAGAAGA-----GG---------------------AGAGACCCCCTATCTGTTCTTCAGAAAAA-CGA--TG-TTGAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAAA--AC-CTGGAATaggcttttg
gi|6 : TGGGTATGGGGATTGAAAGAG-AAGCT---AA-AAGTTGTCCA-CAGCTTTGT------GACTACATAGCACAA-GCTATGCT--GCGACAAAAGTCTCTGCAAGACA-AGAAACTATACTG--GC--AA---TCAT-T-GAA----------------------GTCTATTCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTGG-CAAAACTG-----T--------------CAAATTTA-----TGTGGTTCAA--GG---T------------TTA--CG-TGTGGACAG-------------AGAAGGCAAAAAA--TTACAGGAGAAATCTGTTGAAAAAGAAAACTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|7 : GACGAAATGTATCTACTCCATTGGATATCATGTATG--AAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAGGAGCAAGCTCACAA-AAGC-GTTCGTCAAA---AT------G-----A-AGAGCAT-GCAATGGT--AAGACAAAAGCATTACCATGACA-AAAGATTGAATTG--GGGGAA----CTT-T-AAAGTTA---A-TGATGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCA-AG--AAAA-TGTCAGATGTGACAT------ATCATGTTGTCAATTGTGGTTCACAGGGTTCTAAT-CG---G-GTAATCCA-CGTGGATAGAATGCGGCT--AAAG
gi|8 : AGCGA-CATTTGA-ACGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTc
gi|9 : ATGGGTGTGACAATTGCAAGAT-AGACTTG-AGCAAGCT---CA-CAAAATTGTTC----G-T--CAAAATGCAGTGGTA------A-GACAAAAGCATTACCATGACA-A-AAATTGAATTGAGGG--AACTTTAATGT-AAA--TT-------ATGAGGTGTATGTCTATTTTCC-ACGAACCAAAACGGGACAGTCGCCAAAATTTAC-TAGCTATTGCAG
blockSeqs : A . T . . . . . . . A . . A . . AATA GT . C T . A G G AC C G . G TC A . GCA G A . . A . A . . G T G GTGA A . . . . . . T T G T AC . . . A . . A G . . A A G A . . C . G C . CACCTGTTCG T . AATAGAA A A T . CTC . G T AGGAG G T A A GG A A AGAA T T A . TG . T . A TT G A C . A G A A TT . C A . G C . C . G AA A AA G G C C T . AT . . T . . A T C AA A . AC A C TG A A . . . . C CA C C C A CC A T ATC AG CT TC T A A T CTT T A T AACAGTTACTGTTGGGTGTACA T CCT GATCGGGTAGAAACACTTTCAGATCTCCAGGG A AA A AG T GTCTTG GAAAAA T A A . G C G C GGGTG T G AAAA . GAC TT . G . . G CGCAG CAAAA A TC C . C GTAATAA G NNNNN A G T T . A A C A . TGAT T A A . C TTAGCAA . A CT A TGGTA A C GG TTCCA G G T GG A TC CA AAAAAAA ATTATATGCA C ATGCA C G G A A A A G T A T CT T TC AT A G C A . . C A A A GTAC A G CTA A C CAC C T GCTT GACTACATAGCACAAGCTATGCTGC T AT AA . G CT GGGG CTTT G C ACCCGTT A T C A AAC AAA A T TG A A C A CAG T C C TCAGATGTGACAT C TCAAT GA TAAATCTCAGT TC . A TTTTA . G A A T A C A . . AT . . C A C C T C . . C AA . TT
blockSeqs : TG A . . . . . TT . A . T A A . . . AT A . T . . C A . T C . TT A . . AA . TC G . A . CCG . . A AAATTCAGGG . . GGAGAGACCCCCTATCTGTTCTTCAGA C . . AA C G GAAG . A C . . . . G . C A A . AGT . . . . . . N NNNNNNN N . C C T . . T C T T . TGAT T A A . A AGA . T AA . TAGTT T A G . . C A GG C T T . CGCTTG A TTGTA C T . T A . G G . A . . . . . . T T ATG T . G A . TG . . AAAT TCGTCAAAATGCAGTGGTAA T TG AT . G AT AGGG T . . AGTTAAT G A . C AAC AAA T G GT . A G T . . . . T T . CA TTCTAATCGGG TC . A GCT A . A . .
blockSeqs : . A . . A . . . . T . . . . . . A . . . AG . . G . . . AG G . . . . . . T C T T . . . . . TC . . C G . . . A A . T C . . . A . C . . . . . . . C . . . . GC GAAGAGCATGCAATGGTAA C AC AT . A GA AC T . . ATT G G . C T . C G AT . . G . A T . . . .
blockSeqs : C . . . . AA GCTAC C AC . . . GA GC . . . A . .
blockSeqCons : GAAACGCGTGTAC********************* GGC***
originalCons : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACGCA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGT------G-C--CACAGCGCAA-GCTATG-T--A-GACAAAAGCCTTANCACGACA-AGAAACTNTATTG--GC--AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG---TAAT-TC---G-GTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
finalCons : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTC-GATATGAAAATTGAAACACAAACC-AGGNCGTC-GAC-ATNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACGCA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGAG-----AACC-G--AA--GC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGATCC-ATCCTCCAGGCTGC--TACTGTGCCTTT-CAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCCAA-CGTA-GCTCGTGTGATCTGGAATACCTATGGAACGCATAG-CAATGGATANTGTTTGG-GAAGAACTCCCGCGCAC--CGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGACTTC-GCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGTGAAACGCGTGTAC---------------------GACAAAAGCCTTANCACGACA-AGAAACTNTATTGGGC---AA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-AG-CAAAACTG-----TGTGAC-T------ACAAANTTG-----TGTGGTTCAAAGGG---TAAT-TC---G-GTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111
lowQualScore : 1 1 11 1 1 1 11 1 222 1 1 1 1 2222 11 1 222 1 11 222 11 1 111 11 1 1 11 222 5555555555555555555555555 11 1 1 11 1 1 11 222 22222 11 11 22222 222 11 11 3333333 444444444444 1 3333333333 1 1 3333333 1 222222 222 1 1 22222 1 1 222 1 1 1 111 1 1 1 11 22222 22222 1 1 1 11 11 1 1 222222 11 1 88888888888888888888888888 11 1 1 11 1 11 111 1 11 55555555555555 1 111 1 1 11 1 111 11 1111 1 111 1 1 666666666666666666666 222 55555555555555555555555555555555555555555555555555555 11 11 1 222222 3333333 1 1 33333 1 11111 1 111 11 1 1 66666666666666666666 1 1 3333333333333 11 1 1 2222222 33333 1 1 1 11 1 1 2222222 11 1 3333333 11 22222 1 11 3333333 666666666666 2222222 1 1 1 22 11 2222 11 1 1 222 1 111 222 666666666666666666666666666666666666666666666666 11 111 11 5555555555 11111111 1 1 222 222 888888888888888888 33333333 555555555555555 1 11111 11 11 222222 3333333 6666666666666666666666 222 2222 1 1 1 1 1 2222 11
lowQualScore : 1 5 1 5 88 5 5 5 88 5 1 111 5 5 5 5 4444 88 5 1 1 111 1 5 1 88 1 1 111 1 88 1 5 999 1 1 77 5 1 5 1 88 111 1 1 1 8888888888888888888888888 1 88 5 5 88 5 5 1 1 1 1 88 000 66666 88 1 88 55555 2 1 111 88 1 1 1 1 77 2222222 1 777777777777 1 1 5 9999999999 5 5 3333333 1 5 1 888888 000 5 2 5 44444 5 1 1 5 0 000 7 3 8888 3 7 5 3 777 0 0 1 0 1 88 5 1 1 88 1 1 1 1 22 66666 1 1 77777 5 1 5 1 5 1 66 1 88 1 2 2 3 3 999999 88 5 33333333333333333333333333 1 88 5 1 1 5 66 1 5 88 0 0 7 6 999 0 7 1 5 88 22222222222222 3 2 111 0 6 2 0 11 0 3 0 777 44 0 33 0000 1 0 0 777 3 0 444 0 0 1 0 0 444444444444444444444 7 333 55555555555555555555555555555555555555555555555555555 88 33 0 999 1 777777 7777777 0 0 7 1 3 6 6 6 1 33333 2 6 44444 3 999 88 3 0 2 99999999999999999999 5 5 2222222222222 1 11 6 3 0 4444444 1 33333 1 1 3 0 0 1 1 0 0 2 11 0 5 33 3 3 4 3 1 1111111 88 1 0 11 0 6666666 1 4 22 55555 0 1 4 99 1 99 55 2222222 0 000000000000 0 0 1 1111111 6 1 9 1 3 0 7 2 0 3 33 88 7 4444 88 3 1 1 5 111 5 1 1 1 1 7 6 0 3 6 999 0 8 8 555 8 0 8 333333333333333333333333333333333333333333333333 5 1 22 77 8 3 22 88 3 444 8 11 6666666666 1 3 2 2 1 11111111 1 1 11 5 5 0 1 1 333 0 222 6 6 888888888888888888 1 66666666 44 555555555555555 55 0 3 66666 88 1 1 7 7 0 44 6 7 999999 2222222 2222222222222222222222 111 4444 1 5 5 1 1 1 5 5 5 22 3333 88
lowQualScore : . . . . .. . . . .. . . ... . . . . .... .. . . . ... . . . .. . . ... . .. . . ... . . .. . . . . .. ... . . . ......................... . .. . . .. . . . . . . .. ... ..... .. . .. ..... . . ... .. . . . . .. ....... . ............ . . . .......... . . ....... . . . ...... ... . . . ..... . . . . . ... . . .... . . . . ... . . . . . .. . . . .. . . . . .. ..... . . ..... . . . . . . .. . .. . . . . . ...... .. . .......................... . .. . . . . .. . . .. . . . . ... . . . . .. .............. . . ... . . . . .. . . . ... .. . .. .... . . . ... . . ... . . . . . ..................... . ... ..................................................... .. .. . ... . ...... ....... . . . . . . . . . ..... . . ..... . ... .. . . . .................... . . ............. . .. . . . ....... . ..... . . . . . . . . . . .. . . .. . . . . . ....... .. . . .. . ....... . . .. ..... . . . .. . .. .. ....... . ............ . . . ....... . . . . . . . . . . .. .. . .... .. . . . . ... . . . . . . . . . . ... . . . ... . . . ................................................ . . .. .. . . .. .. . ... . .. .......... . . . . . ........ . . .. . . . . . ... . ... . . .................. . ........ .. ............... .. . . ..... .. . . . . . .. . . ...... ....... ...................... ... .... . . . . . . . . . .. .... ..
lowQualScore : 0 5 0 5 00 5 5 5 55 5 0 555 5 5 0 0 5555 00 5 0 0 000 0 0 0 00 0 0 000 0 00 0 5 000 0 0 55 5 0 5 0 55 555 0 0 0 0000000000000000000000000 0 00 5 0 00 0 5 0 0 0 0 00 555 00000 00 0 00 00000 5 0 555 00 0 0 0 0 55 0000000 0 555555555555 0 0 0 5555555555 5 0 0000000 0 5 0 000000 555 5 5 5 55555 0 0 0 5 7 777 3 3 3333 7 3 5 3 777 7 0 0 0 0 33 0 0 0 00 0 0 0 0 00 55555 0 0 00000 0 0 0 0 5 0 55 0 55 0 0 0 7 7 000000 55 5 00000000000000000000000000 0 00 0 0 0 0 55 0 0 00 7 7 3 7 777 7 3 0 5 55 00000000000000 3 5 000 0 5 5 0 88 8 2 0 555 00 2 88 5555 2 2 8 222 2 0 000 0 0 0 7 7 000000000000000000000 3 333 33333333333333333333333333333333333333333333333333333 88 88 0 000 0 555555 0000000 2 0 3 0 3 7 7 7 0 33333 0 7 33333 3 333 33 3 7 0 00000000000000000000 5 0 5555555555555 0 00 7 3 3 3333333 0 33333 0 0 2 0 0 0 0 2 0 0 22 2 5 88 2 2 2 3 0 3333333 33 0 7 22 0 8888888 2 2 55 00000 0 0 2 00 2 88 88 5555555 7 777777777777 7 7 0 1111111 5 2 0 2 2 0 0 5 0 2 88 33 3 0000 33 3 0 0 5 000 5 0 0 0 0 3 7 7 7 7 000 7 8 0 000 0 8 0 666666666666666666666666666666666666666666666666 0 4 44 22 0 2 44 00 2 000 0 88 8888888888 4 8 5 5 0 22222222 0 0 00 5 5 2 0 0 333 7 777 7 7 000000000000000000 0 88888888 00 888888888888888 88 0 2 00000 00 0 0 3 3 7 77 7 3 000000 5555555 5555555555555555555555 000 0000 0 5 0 0 0 0 5 5 0 00 5555 55
consensus : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TG-TTCGATATGAAAATTGAAACACAAACC-AGGNCGTC-GACA-TNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACGCA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGA-----GAACC-G--A--AGC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGAT-CCATCCTCCAGGCTGC--TACTGTGCC-TTTCAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCC-AACGT-AGCTCGTGTGATCTGGAATACCTATGGAACGCATA-GCAATGGATANTGTTTGG-GAAGAACTCCCGCGCA--CCGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGAC-TTCGCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGT-----GA----------AGCGCA----A-----TGC-----TAAGACAAAAGCCTTANCACGACA-AGAAACTNTATTG-GGCAA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-A-GCAAAACTG-----TGTGA------C-TACAAANTT--G-----TGTGGTTCAAAGGG---TAAT-TC---GGTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
Reference ( family-1193 ) : GATGCNATGCCTACCANAATGGGGTGAGTTTGAGTTTGATGCCTAGTACGATATGAGTTCCTTGCATTCTGNAATATGAGGATATAGTTGCTAAAGTGTCGCAGTACAAAATACAATGTACAGACTAGGGCCCCTGTTCNCATTNTGAACAATGTTTNAAGANAGGTAACTCAANGTCGTAAGGCCNGGGTACAGNTTGTCACCGNCGTTTACTNCATGANGTNATCGAGGAGGAATGCCAGTCTAATANAACGACAAGTCNATCCAGTAGGAAAATTCNCCCACCTCACTTGCNGAGCCNTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGANCAGAAGCGATACGTGAAGAAAATTTCTTGGCACGGCACTTGCATGCCCTGATTCGCTCTNGATGACAAAGNCCTNGGNCGCAACCGAGCCCTAGTGAAAGAGCGCACGAAATAGTGNTAAGCAGAGTCGCCCCACGAGCTNCGTATATCCTANACAGGNANTCAGANGGACTCCTGTGCATCTCGGGGCGACGGAGACATCCATGAACCAACACATANATGGCATGTTGGAAGAAATGTTATAGAGAAGNCNTCAAGTCCATGGGGCATCACCACCTGTTCGAGTTTGCTCTACGAAATAGAAGATTNTGCGTCGACTACAGGANATTAAACGAGGCGACAATCACTCAAAGGCGCATACCCGTTACCATCGCATAGATGAGACGTTAGACAATCTGGTCTGGAAGGANCAAGCTGNTTCTCNACCATGGACCTACTGTCGGGTGTACTGGCAAGTGGAAATGA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTCCAGTTTAAGGTAATGCCATTT-GGGTTA-T-CAATGCGCCAGCGA-CNTTCGA-GCGACTNATGGATACTGTCNTAAGCGGTCTTCAGANGGNAACATGCTTGGTGTGAACCTAGATGATANAATCGTACCTGGGAAGTCATTCGATGAAANGGTGGCGANCCTTGAAAATGTGTTCACGGGGTTATCGGCTGCNGGTTNNAAGAAAGACTGAAAGNTGNAATTTATTTGCCAAAGAAGTTNAGGTACTTNGGACACACCTATCCCNGAATTTGGTGTATCAACAGATCCAAAGAAAATTGGGGCTATCAAAACGTGGACTGAACCANCTTCNGTAAAAGAGCTTNGATCGTTCTTGGGCCTTTGCAGTTACTATCGTCGATTCATCAGAGGGATTTGCTACGGTAGCCAAATCACTAGCACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAGAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAACACCNCCTTATAAATGCACCCAAATCCTGGCATATCCGCGANTTCGGGAAATCATTTATNTTGGACACCGACGANAGCGACAGTGGCATTGGAGCAGTCCTTTCCCAGANGATTGAGGGCGAAAGAGCGAGTAGTAGCACACACGCGAGTCGAACCCTCTTCAAAGCATAACAAAAGTATT-TGTGCGACTCGTAAAGAGCNCTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAA-TCAGAACAGATCAT-A-C-TCATTGCGT-TGGCTTTCGAACTTTAAGGATCCGGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TG-TTCGATATGAAAATTGAAACACAAACC-AGGNCGTC-GACA-TNATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTATGGTTATACCCGAGTACAACGAGGAAAGTAACGCA--AGTCGCTGTCGGG-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAA-CGA--TG-TCGAAATCAAGCAAAGTAANGAGTTGGTTGGAGCAAAAGGTGA-----GAACC-G--A--AGC-CTGGAATTATCGTCGGGAGGACCGATGCTGAAGTCTCTGTGNTC-CCAAAGATCACTTTTGGGGGTGAAGGNCGA-----TCTGCCTCGTAGACGATGGACTGA-AAAGGAGAGAT-CCATCCTCCAGGCTGC--TACTGTGCC-TTTCAGCGAGAGACGACATGTACTCAATTATACACCATGACCTATAGAAACCGCAAGGTCACCTCGGAGTGACAAAGACTCTACGCAGAGTACAAAAAAATAAGGNAAATATTCTATTGGCCTGGGCTAC-AAAGAAATGTCAGACACATGTAGTAATAAAGNCGGT-----TGTNAGANCTGCATGAAATCAAA-GAGCC-CGAACAAANCTNTGAGAGCTCC-AACGT-AGCTCGTGTGATCTGGAATACCTATGGAACGCATA-GCAATGGATANTGTTTGG-GAAGAACTCCCGCGCA--CCGACANAAACGACNGATATA-TCTT--GGT-GTTTCTGATTATTTCACCGAATGGGTCGAGG-CATTTGTT-----ATGCCAAATAT-GGAAGNAGCAACGGTGGCGGACATAGTCTGCAAAAAAG-------TTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-ATT---CGC--GGACCGAGGAAAGCGATTTGAAGGCAAATTATTNACAGAA-TGTG-ACAAAGTTCTGGACATTGATAAAAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGA--GGCATGG--TGTGAGCGATTCAATAAGAC-TTCGCTA--TC-AATGCTTCGNANCTTGGTGAACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCGTTCGTTCCTGATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATNTAGTCCAAACNATCTCATGTTTGGAAGAAANGTAACNACTCCTCTTGAGGTCATGTGTACCAAATGCCCAATTCGACGAGGAAC--GTTCCCCCGAATCAATGGGTATGGGAATTGNAAGAG-AAGCT---AG-AAGCTGTTCA-CAGCTTTGT-----GA----------AACGC-----G-----TG------TACGACAAAAGCCTTANCACGACA-AGAAACTNTATTG-GGCAA---TCAT-T-AAA--TC---G-TGATGAGGTNTATGTCTATTTTCCCANGNACCAAAACTGGANAGTCNCCAAAGTTCACACAGCTATTGGAGAGGNCNATTT---GCTGTCG-A-GCAAAACTG-----TGTGA------C-TACAAANTT--G-----TGTGGTTCAAAGGG---TAAT-TC---GGTTATCCA-TGTGGACAGAATGCGTCTCAAAAGAAGGCAGGAAATGTCACANGAGAANTCTGTTGAAAAAGAAAACTCAAATGATTCGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAANCAAGATATAAGACAAACNACCNAANTGGCTATTCAGATTATTGAAACACTGNNATGTTTGTCATTTCTTCTGCAAGGAA
gi|1 : GATGCTATGCCTATCAGAATGGAGTGAGTTTGAGTTTGATGCCTAGTATGATATGAGTTCCTTGCATTCTGTAATATGAGGATAT-GTTGCTAAAGTGTCGCAGTATAA----TAAT--ACAGACTAGAGTCCTTGTTCGCATTATGAACAATGTTTCAA-ACAGGTA--TTAAGGTTGTAAGGTCTGGGTACAGTTTG--ACTGTCGTTTACTT--TGATGTCATCGAGGAAGAATGCCAGTCTAATATAACGACAAATCCATCCAGTAGGAAAATTCTCCTATCTCACTTACAAAGTCTTTTAGAGCGCTCAAGCTTGAAGGCCTTAACTACCAGACCAGAAGCAATACGTGAAGAAAATTTCTTGGCATGACACTTGCATGCTCTGATTCGCTCTGAATGACAAAGACCTTGAACGCA--CGAGCCCTAGTGAAAGAGCGCACGAAATAGTGTTAAGCAGAGTCGCCCCACGAGCTCCGTATATTCTATACAGGCACTCAGACGGACTCCTGTACATCTCGGGGCGACGGAGACATCCATGAACCAACACATAGATGATATGTTGGAAGAAATGTTATAGAAAAGTCATCAAGTCCATGGGGCATCAC----------AGTT-GTTCTACGA-------GATTTTGCGTCGACTAC-GGAAATTAAACGAGGCGACAATCA---AAAGACGCATACCCGTTACCATCGCATAGATGAGACATTAGACAATCTGG-CTGGA----TCAA-CTGGTTCTCTACC-TAGACCTACTGTCGGGT--ACTGGCAAGTGGAA--GA-GGCAGAGGACCGAGCCAAGACAGCATTCATAACCAAACGTGGTCTGTTTTCAGTTTA-GGTAATGCCATTTTGGGTTA-T-CAATGCACCAGCGAACCTTTGAAGCGACTGATGGATACTGTCCTAAGCGGTCTTCA-ACGGAAACATGTTTGGTGTGAACCTAGATGATATAATCGTACTTGGGAAGTCATTCGATGAAATGATGGCGATCTTTGAAAATGTGTTCACGAGGTTATCGGCTGCTGGTTGAAAGAAAGACTAAAAAGTGCAATTTATTTGCCAAA-AAGTTGAGGTACTTGGGACATACCTATCTCTGAATTTGGTGTATCAACAGATCCAAAGAAAATTGAGACTATCAAAACGTGGACTGAACC-TCTTCTGTAA--GAGCTTCGATCGTTCTTGG-CCTTTGTAGTTATTATCGTCGATTCATCAGAGGGATTTGCTACAGTAGCTAA--CACTAACACAAATTAACTCACAAAAATATGAAGTATGTTTGGACAAAAGAATGTCAGGAAGCGTTCGACTCCGCTGAAAATATCACCTTATAAATGCACCCAAATTCTGGCATATCCGCGACTTCGGGAAATCATTTATATTGGA-ACCGACG-CAGTGACAGTGGCATTGGAGCAGTCCTTTCCCAGATGATTGAGGGCGAAAGAGCGAGTAGTAG--CATATGCAAGTCG-ACCCTCTCCAAAGCATAACAAAAGTA---TGTGCGACTCGTAAAGAGCTTTTATGTTAAGCACTTTTCGGCATTAAATCTTTATGGAAGGGAATTTACAAGTCAGAACAGATCAT-AGC-TCATTGCGC-TGGCTTATGAACTTTAAGGATCCAGAAGGACA-GTGGGCAAGATGGCT---TGAAACGCTAGCAA--TGTTTTGATATGAAAATTAAAGCACAGACC-AGGATCTC-GACA-CCGTAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAATGTAAGGTTATACCCGATTATAATGAGGAAAGTAATGC------CGCTGTT--G-----GTGTAGCACTTTGGAAATGACT---GTTGACGACGTAATAGAAGA-----GG---------------------AGAG---------------------AAAATCGA--TG-TTGAAATCAAGCAAAGTAAGGAGTTGGTTGGAGCAAAAGGTGA-----GAACCAG--AATAGC-CTGGAATTGTCGTCGGG-GGACCGGTGTTGAAGTCTCTGTGGTCGCCAAAGAGCACTTTTAGAGGTGAAGGACGA-----TCTATCT-GTAGACGAT-GACTGATAAAGGAGGGATCCCAACCTCCA---TGC--TATTGTGCCTTTTCAGCGAGAGACGACATATACTCAATTATACACCATGACCTATAGAAACTGCAAGGTCACCTTGGA-TGACAAAGACTCTA-----AGT-----AAAATAAGGCAAGCATTTTATTGGCCTGGGCTACTAAAGAGATGTCAGACA-ATAT-------AAGCCGGT-----TGTGAGATCTGCATGAAATCAAA-GAGCCGCGAACAAAACTATGAGAGCACCAAATGCAAGCTCGTG-GGGCTGGAATACCTATGGAACGCATAGGCAATGGATATTGTTTGG-G--GAACTCCCGCGCACGCTGACAGAAACAACAGATATA-TCTTTAGTT-GTTTCTGATTATTTTACCAAATGGGTCGAGG-CATTTGCG-----ATGCCAAATAT-GGAAGCAGCAACGGTGGCATACATAGTTTGCAAAAAAG-------TTGTTGCAAGGTTTGGGGTTCCATGTGTCATACATT-----C--GGACCAAGGAAAGCAATTTGAAGGCAAATTATTTACAGAA-TGTG-GCAAAGTATTGAACATTAATAAGAACCCGTAC-GAACGCCCT-ACCATCCCCAATCAGAACGGCATGG--TATGAGCGATTCAATAAGACTTTTGCTA--TC-AATGCTTCGTAACTTGGTG-ACGAGAATCAGAAGAACTGGGACGAGCTCCTCCCATTCGTTCTTAATGGCATACAGATCTGTAGAGCAGGAGACTACAGGATGTAGTCCAAACTATCTCATGTTTGGAAGAGAGGTAAGCACTCCTCTTGAGGTCA--TGTACCGAATGCCCAATTCAATGAGGAAC--ATTCCCCCGAATCAGTGGGCATGGGAGTTG-AAGAG-AAGCT---AG-AAACTGCTCA-CATCTTTGT-----AAGGCAGCACACAACACAAGCTA-----TGT-----TGAGACAGAAGACTTTGCACGACGCAGAAACTCTATT--GGCAA---TCAT-T--CA--TCCCGG-TGATGAAGTTTATGTGTACTTTCCCAGGTATC-AGTCTGAAAAATCTCCAAAGCTCACACAGTT-TTGGAGAGGTCCATTT---GCTGTTG-AGGCAAAACTA-----TATGATTTAACT-TACAAAGTTAGA-----TGTGGTTCAAAGGG---TAATATCA--AGTTATACAGTGTGGACAGAATGCGTCTCAAAAGAAGACAGGAAATGTCACATGAAAATTCTGTTGAAAAAG-AAACTCAAATGATTTGATACCAGAAGAGCAATAGATCAAATCTGACTCGGAAGGTTACAAGGGAATAACGATATATAGCTATGAGCAACAGACGATAGTTTGAGAAGAAATGTGTCATTCTGAAGCAAGAT-TAAGA-AAACAACCAAAGTGGCTATTCAGATTATTGAAACA-TATTATGTTTGTCATTTC--CTGCAAGAAA
gi|10 : -TCAAAACAGACCAT-A-CCTCATTG-GTATGACTTCCAAGATTTAAGAACCCGG-AGGGCATGTTGGGAAAATGGCTATCTG---TTCTAGAAACTTG-T--GATTTCAGTATAG-AACACAAACCTAGGA-GTT-AACA-TTATAACGCAG
gi|11 : ACTGATACA-TCTT--GGTAGGATCAGATCATTTCACTCGATGTTCCGAG------TGTTTTCCAATGCCAAATATGGGGGGGGGGAACTGTGGC---CAAGATCTG--AACAAG-------TTATTACACGGTTTGGAGT
gi|12 : aGTG--CAAAGTT--GGGTATAGAAAAAAACTCGCAT-GAAT-CCGT-ACCATCCCCAATC------GCATGACTTGTGAGCGGTTCAATTGCAC-T---CTAATTCAAATGCTT
gi|13 : AAACTT--G-----TGTGGTTTAGAGGG---TAAA-TCTCAGTTTATCCA-TTTTGTCAGAATGCGTTTTAAAAGGAGG
gi|14 : ccgttgacgaagtttacaattaaatttaCTACTGTCAGG-GTACTGGCAAGTGGAAATGAAGGCAGAAGACCGAGTCAAAACAGCATTCATAACCAAACGTGGTCTGTTT
gi|15 : ATGCCATTT-GGGATG-TGCAATGCGTCAGCCA-CTTTCGA-GCGACTAATGGAGACAGTTTTACGTGGCCTTC
gi|16 : ACGCGAGTCGAACCCTCTTTAAAGCAGAACAAAAATATTGTGTGTGACTCGTAAAGAGC
gi|17 : tTTGAAAAAGAAAATTCTAATGATTTGATACCAGA--AGCAATAGATCAA
gi|18 : ATCGTTCCTGAGTCTTTGCAGTTACTATCGTCGATTTATCA
gi|2 : ---------------------AGAT---------------------AAAA--GA--CG-TCGAAATCA-GCAAAGTAATGTGTCGGTTGGAATAAAAGGTGA-----GAACA-G--A--AGCTCTGGAATTATTGTCGGAAGGATCGATGCTGAAGTATCTGACATC-CCAGAGAT-ATATTTGAGG-TGAAGGCCCAGGGTGTTTGCTTTTCAGATGATGGGCTGA-A-----GAGAT-CCATCCACCAGACTGC--TGCTGTGCC-TTTCAATGAGGGACGACAT-------ATTA--------------------CCGCA-GGTCACCTCGGAGTGACAAAAACTTTACGCAGAATACAAAAAAATAAAAAAAATAC-------GC--AGAATAA-AAAGAAATGTCAGATACATGTAGTAATAAAGGCGGT-----TGTAAGTGCAGCATGAAATCAAA-GAACC-CGAACAAAACTATGAAAGCTCC-AACAA-AGTTCGTA------GGAG-----ATGG---------------GATACTATTTAGCAAAGGACACCCGCGCA--CCGACAAAAACGTAAGATATA-ATTT--AGTTGTTTCTGATTATTTCACCAAATGGGTCGAGGGCATTTGTT-----AGACCAAATAT-GGAAGCAGCAGCAGTGGTGGATACAGT-TGCAAAAAAAAAAAAAATTGTTGCAAGGTTTGGAGTTCCATGCGTCATA-------CGCTTGGACCAAGGGAAGCGATTTAAAGGCAAATTATTCAAAGAAATGC--ACAATGCTCTGGTTATT-ATAAAGACCCTTATAGGACGCCCTTACCATTGCCTATCAGAT-GGGATGG--TG-GAGCGATTCAATAAGAC-ATCGCTC--TC-AATGCTTCGGACCTTGATGAATGAGAATTAGAA---CTGGGACGAGCTCTTCCCGTTCAT-CCTGATGGTATACAGATCTGTAGAACAGGAAACTACAGGATCTAGTCCAAACAATCTCATGTTTGGAAGAAAAGTAACAACTTCTCTTGAGGTTATGTGTACCAAATGCCCAATTCAACAAGGAAC--GTTCCCACATACCAATGAATATGGGATTTGAAAAAG-AGGCT---AG-AAGCTGTTAA-CAGCT-------------------------------G-----TGC-----TACGACAGAAGTCTGATC-------AGAAACTCTACT--GACAG---TCAT-TCAAAC-CC---GTTGACGAAGTTT
gi|3 : cccAACCGAT-AT-A-C-T-ATTGCAT-TGGTTTT-GAACTTCAAGGGTTCAGAAAGACA-GTGGGCAAGATGGTT---TTAGACAATGGCAA--TA-TTCAGTGTGAAAACTGACACACAA-CC-ACACTTTC-GATA-TAATAATACAATTGCGTTCATCTGGAAAACATGCAAGAAATGTATGTTTATGTCTGAGTACAATAATGCAAGTAGCACA--AAT-----TCAGG-----GTACAGCACTTTGGAAATGACTCCTGTTGACGCCTTCATAGAAAAGATCGGGTAGAAACACTTTCAGATCTCCAGGG---------------------AAAA-AGAAATAATCGAAATTAA-CAAAGCAACGAGTTGGTTGGAACAAAGGGTTAGTCTTGAACC---------C-CTGGATTTATCATCGGGAAGACCGATGCTGAAGTCTCTGTGCTC-CCAAA-ATCACTTTTGGGGGTAAAGGGTGA-----TCTGCCCCGTAGACAATGAACTGA-AAAAGACAGAT-CCATCCTCTAAGTTACTTTACTGTGCC-TTTCAGTGAGAGACAACATGTACTCAAT
gi|3 : AATATTCTATTGGCCTGGGCTAC-AAAGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAGACATGCATAAAA-CAAATGAGCC-TGAACAAATCTCTAAGAGTTCC-AATGT-AGATCATGTGATCTGGAATACCTATGGAACACATattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|3 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcTGTATAAAATAAAT-GAGCC-TGAACAAATTTCTAATAGTTCC-AATGT-AGCTCATGTGATCTGGAATACCTATGGAACACATA-GCAATGGATCATGC---A-GAAGAACTCCCACGCA--CCAACATAAACAATCGATATAATCT-------GTCTCTGATTGATTCACTGAATGGGTCGAGG-CATTTGTT-----ATGCCATGTAT-GGAAGAAACAACAGTTGTGGATATAG-CTGT--AAAAG-------TTGTTGCAAGATTTGGAGTTCATTATGTCATA-ATTATATGC--ATACCGAGGAAAGCAATTTGAAGGCAAATTATTAACAGAA-T-TGTACAAAGTTCTAAACATT-ACAAAA--TCGTAC-G-ACGCCCT-TCCACCCCTAATTAGA--ncatgtataaaataaatgagcctgaacaaatttctaatagttccaatgtagctcatgtgatctggaatacctatggaacacatagcaatggatcatgcagaagaactcccacgcaccaacataaacaatcgatataatctgtctctgattgattcactgaatgggtcgaggcatttgttatgccatgtatggaagaaacaacagttgtggatatagctgtaaaagttgttgcaagatttggagttcattatgtcataattatatgcataccgaggaaagcaatttgaaggcaaattattaacagaattgtacaaagttctaaacattacaaaatcgtacgacgcccttccacccctaattagat
gi|4 : aaccgatatactattgcattggttttgaacttcaagggttcagaaagacagtgggcaagatggttttagacaatggcaatattcagtgtgaaaactgacacacaaccacactttcgatataataatacaattgcgttcatctggaaaacatgcaagaaatgtatgtttatgtctgagtacaataatgcaagtagcacaaattcagggtacagcactttggaaatgactcctgttgacgccttcatagaaaagatcgggtagaaacactttcagatctccagggaaaaagaaataatcgaaattaacaaagcaacgagttggttggaacaaagggttagtcttgaacccctggatttatcatcgggaagaccgatgctgaagtctctgtgctcccaaaatcacttttgggggtaaagggtgatctgccccgtagacaatgaactgaaaaagacagatccatcctctaagttactttactgtgcctttcagtgagagacaacatgtactcaatattctattggcctgggctacaaagaaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtcagacatgcataaaacaaatgagcctgaacaaatctctaagagttccaatgtagatcatgtgatctggaatacctatggaacacatncaGATGCAA-GCCTACCATAA-GGGGTGAGTTTGA--TTGA-GCC-AGT-CGAT--GAGTTCCTTGCAT-CTGAAA---GAGGA-ATAGTTGCTAAAGT-TC-TAGTACAAAATACAATGTACAGAC-AGGGCCCCTATTCCCATTTTGAACA---TTTAAAGAGAGGTAACTCAACGTCGTAAGGCCGGGA---AGGTTGTCACCGACGTT-ACTGCATGAGGTAATCGAGGAGGAAT--CAGTC-AATAAAACGACAAG-CAATTCAG--AGAAA---CGTCCACTTCACTTGTTGAGCCGTTTAGAACGC----G--TGA---------------GAACAGAAGTGAT--GTGA-GAAAATTTCTTG-CACGGCACT--CAT-CCCTGAT-CGCTTTTGATGACAAAGTTCTGGGTCGCAACCG---CCTAGTAAA-----GCATAAAAT--TGATA--CAGAATC-----AAAAGCTGCG---ATC--AAACAGAAAGTCAGAAGGACTCCTGTGCATCTCGGGG--ACG-------CCATGAATCAACACATACATGGCATGTTGGA------------GAGAAGGCCTTAAGTCCATGGG-CATCACCACCTGTTCGAGTTTGCTCTA-GAAATAGAAGATTATGCGTCGATTACAGGATATTAAACGA------AATCACTCAAAGGCGCATACCTGTTACC-TCGCATAGATGAGAGGTTAGATAATCTGATCTGGAAGGAGCAAGCTGTTTTTCAACCATGGACCTGCTGTCAG-TGTACTGTTAAGTGGCAATGG-GGC------------CTAGATAGCATTCATAACCAAACATAGTCTG-TTCCAGTTTAAGGTAATGTTATTT-GGGTTATT-CAATGTACCAGCGA-TATTCAA-ATGAt
gi|5 : ATTGGGGCTATCAAAACGTGGACTGAATCAACTTCAGTAAAAGAGCTTGGATCGTTCTTAGACCTTTG---------------------CAG------TTACTATGGTAGCCAAATCACT-GCACAAATTAACTCACAAAAATATGAAGTATGTTTGAACAAGAGAAT--------------------------AACACCTCCTTATAAATGCACC--AATCCTGGCATATCC-CAAATTTGGGAAATCATTTATTTTGAACACCGACGAAAGCAACAGTGGCATTGGAACAGTCCTTTTCCAGAAGATTGAGGGC-AAAGAGCGAGTAGTAGCACACATGCAAGTCGAACCCTCTTCAAGTTATGT--AAAGAATT-TCTATCAGTGGT------CACTTATGTTAAACACTTT-CGACATTA--TCTTTA--------------CAA-TGAGAACAGATCATCA-C-TTATTGCGT-TGGCTTTTGAACTTGAAGAATCCGAAAGGACA-GTGGGCAAGAGGGCT---TGAAACGCTAGCAA--TG-GTCAATATAACAATTGAA-CACCAACA-CGGCCGTCTGACAATGATAATGCAGATGCTCTCAGCAGGAAAACGTGCAAGAAGTGTATGGTCATACTCGAGTACAACGAGGAAAGTAACACAACAGTTACTGTTGGGTGTACATGTAGCAC--TGGAAATGACT---GTTGATGACGTAGCAGAAGA-----GG---------------------AGAGACCCCCTATCTGTTCTTCAGAAAAA-CGA--TG-TTGAAATC-AGTAAAGTAAGAAGTTGGTTGGAGCGAAAGGTGA------AACC-GAAA--AAC-CTGGAATaggcttttg
gi|6 : TGGGTATGGGGATTGAAAGAG-AAGCT---AA-AAGTTGTCCA-CAGCTTTGT-----GACTACAT----AGCAC-----AAGCTATGC-----TGCGACAAAAGTCTCTGCAAGACA-AGAAACTATACTG-G-CAA---TCAT-T-GAA----------------------GTCTATTCCCCCAAGT--------TGGAAAATCTCCGGATGTCACACAATT-TTGAAGAGGCTAATTT---GCTGTTGTG-GCAAAACTG-----T--------------CAAATTT--A-----TGTGGTTCAA--GG---T-----------TTA--CG-TGTGGACAGA-------------GAAGGCAAAAAAT--TACAGGAGAAATCTGTTGAAAAAGAAAACTCAAA-GATTCTATACCAG-AGAG-AATAG--CCAATCTGACTCAGAA------AAAAGAATAACGATA-------ATGA----------AT----------GAAA---GTC----TGAACCAAGATATAAAACAAACCACCTAACTAACT-TTCAGATTA-TAAAACACTGAAATGTT----ATTTCTTTTGCAAGGAA
gi|7 : GACGAAATGTATCTACTCCATTGGATATCATGTATG--AAATGACACCTGCGACTA--AACCTATTCCACAAAATTAATGGGTGTGGCAATTGCAGGAGCAAGCTCACAA-AAGC-GTTCGTCAAA---AT-----GA----------AGAGC-----A-----TGCAATGGTAAGACAAAAGCATTACCATGACA-AAAGATTGAATTG-GGGGA---ACTT-T-AAAGTTA---A-TGATGAGGTATATGTCTATTTTCC-ACGAACCAAAACTGGGTAGCCGCCAAAGTTTAC-CAGCTATTGGCGTGAGCTATATCAGGTTATCA-A-G-AAAA-TGTCAGATGTGA------CATATCATGTT--GTCAATTGTGGTTCACAGGGTTCTAAT-CG---GGTAATCCA-CGTGGATAGAATGCGGCT--AAAG
gi|8 : AGCGA-CATTTGA-ACGACTTGTGGATTCTGTCA-AATCGGTCTTCAGAAGGCAACATGCTTAGTGT--ACCTAGATGATAAAATTGTACCTGAAAAGTCATTTGATGAAAGGGTGGCGAATCTTGAAAATGTGTTCACGGGGTTATTGGCTGCAGGTTTTAAAA-----TGAAAGCTGAAATTT-----CCAAAGAAGTTCA-GTACTTCGGACACATC-ATCCCGAAATTc
gi|9 : ATGGGTGTGACAATTGCAAGAT-AGACTTG-AGCAAGCT---CA-CAAAATTGTTCGTCAA----------AATGCA----G-----TGG-----TAAGACAAAAGCATTACCATGACA-A-AAATTGAATTGAGGGAACTTTAATGT-AAA--TT-------ATGAGGTGTATGTCTATTTT-CCACGAACCAAAACGGGACAGTCGCCAAAATTTAC-TAGCTATTGCAG