lowQualScore : 1111111111111111 111111111111111111111111111111111111111111 3333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 11111111111111111111111111111111 11111111111111111111111111111111111111111111111 1111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111
lowQualScore : 2222 1 1 77777777777777 44444444444444444 22 2 1111 0000000000000000 2222 2 222 2222222 33333333333333333 111 1111 9999999999999999 1 111 333 11111111111 77777777777777 2222 33 44444444444444444444444444444444 1 55555555555555555555555555555555555555555555555555555555555555555555555 11 1 333333333333 1 111 55555555555555555 222 1 222222222222 3333 222 2222 9999999999999 222 4444444 22 11 3333333333333 1 22 44444444 333 11 444444444 11 4444444444444444444444444 11 777 111111111111111111111111111111111111111111 1 111 11 1 1 222222 4 1 111 1 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 666666666666 1 8888888888888888 1 4 33 44 4 4 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 777 4 55555555 4 1 2 222 5555 1 3333 00000000000000000000000000000000 1 8888888888888 2 2 3333 555555555555555 2 33333 99999999999999999999 11 1 33 11 444 1 55555 1 33333 2 1 2 6666666666666 1 111 333 11111 1 1 222 1 33 111 1 11 1 333333 33333 11 1 4444444444444444 1 22 1 77777777777777777777777777777777777777777777777 11 4444444 5555 111 222 99999999999999999999999999999999999999999999 66666666666666 11 4 44 333333 1 11 2 1 1 1 555555 22 1 4444444 444 4 77777 11 2222 2222 1 1 222222222 22222222222 1 222222 33 5555 1111111111111111111111111111111111 11111 4444444444444 11 555555555555 333333 5555555555555555555555555555555555555555555555555555555555555555555555555555555 2 22 1 11111 6666666 1 666 111 2222 11111 5555 1 3333 111 111 22222222222 3 11 11 5555555555555555555555555 33 333 333 222 1 4 11 33333333333 777777777777777777 4 4444444444 111 7777 3 1 3 1 33 1 777777777777777777 22222 3 11 2222222 444 222222222 1 444444 2 1111 3333 00000000000000000000000000000000000000000000 11 6666666666 11111 1111 333 1 444 1 3 777777 33333333333 22 111111 111 111 111111 11 55555555555555555555555555 5555555555 111 11111 444444444444444444444444 111111 11111 3333333333333 1111 333333333 4444444444444444 6666
lowQualScore : 2222 3 3 8 66666666666666 6 99999999999999999 99 0 6 3333 6 6 1111111111111111 2222 2 99 6 2 6 99 333 6 2222222 6 77777777777777777 7 111 0000 8888888888888888 6 3 6 6 111 6 777 99 3 55555555555 66666666666666 1 8888 6 1 3 7 44 666 11111111111111111111111111111111 3 6 77777777777777777777777777777777777777777777777777777777777777777777777 11 77 5 1 222222222222 3 6 111 99 44444444444444444 111 6 222222222222 0 88 0000 8 55 555 6 2222 8888888888888 2 888 6666666 2 5 22 5 33 3 8 8 6666666666666 1 11 55555555 3 111 88 8 999999999 8 66 0000000000000000000000000 33 000 9 2 2 9 333333333333333333333333333333333333333333 0 777 33 0 0 000000 0 3 0 111 3 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 000000000000 3 7 2222222222222222 3 0 6 00 66 0 0 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 000 6 0 6 44444444 0 7 0 666 0000 5 7777 00000000000000000000000000000000 5 0000000000000 0 0 6 8888 666666666666666 0 33333 77777777777777777777 88 5 00 2 88 0 111 3 11111 3 7 99999 3 3 3 6666666666666 6 0 2 111 8 000 3 3 33333 0 3 3 0 3 333 0 3 77 777 0 33 0 999999 55555 33 0 4444444444444444 0 33 0 0 3 3 3 3 22222222222222222222222222222222222222222222222 33 99 1111111 6 3 7 5555 2 6 8 777 8 222 8 8 8 33333333333333333333333333333333333333333333 8 00000000000000 11 0 0 8 8 33 0 888888 0 11 1 0 0 0 000000 9 33 0 4444444 8 0 8 888 8 0 8 88 00000 33 5555 9999 0 0 777777777 55555555555 0 222222 22 66 1111 8 3333333333333333333333333333333333 77777 8 0 3 8888888888888 6 8 11 8 0 333333333333 7 111111 8888888888888888888888888888888888888888888888888888888888888888888888888888888 0 55 0 1 66 0 44444 2222222 6 6 3 000 111 6 6 2222 66666 4444 5 4444 6 111 6 888 6 6 99 44444444444 1 00 44 99 8888888888888888888888888 0 99 55 111 0 000 6 000 6 0 11 0 6 11111111111 8 000000000000000000 1 0 8 6666666666 0 777 5555 0 0 3 0 0 8 2 0 33 3 2 0 555555555555555555 11111 0 0 11 8 6666666 666 0 8 222222222 3 888888 3 1111 7777 0 8 1 1 9 11111111111111111111111111111111111111111111 1 55 6 2222222222 99999 6 6 4444 3 666 9 99 666 3 2 5 2 333333 77777777777 4 5 1 5 00 111111 000 555 666666 00 5 00000000000000000000000000 6 6 6 99 3333333333 111 66666 444444444444444444444444 444444 66666 6666666666666 4444 6 6 7 333333333 999 2 2 6666666666666666 7 2 6 6 0000 6
lowQualScore : .... . . . .............. . ................. .. . . .... . . ................ .... . .. . . . .. ... . ....... . ................. . ... .... ................ . . . . ... . ... .. . ........... .............. . .... . . . . .. ... ................................ . . ....................................................................... .. .. . . ............ . . ... .. ................. ... . ............ . .. .... . .. ... . .... ............. . ... ....... . . .. . .. . . . ............. . .. ........ . ... .. . ......... . .. ......................... .. ... . . . . .......................................... . ... .. . . ...... . . . ... . .............................................................................................................................................................................................................................................................................................................................................. ............ . . ................ . . . .. .. . . ....................................................................................................................... ... . . . ........ . . . ... .... . .... ................................ . ............. . . . .... ............... . ..... .................... .. . .. . .. . ... . ..... . . ..... . . . ............. . . . ... . ... . . ..... . . . . . ... . . .. ... . .. . ...... ..... .. . ................ . .. . . . . . . ............................................... .. .. ....... . . . .... . . . ... . ... . . . ............................................ . .............. .. . . . . .. . ...... . .. . . . . ...... . .. . ....... . . . ... . . . .. ..... .. .... .... . . ......... ........... . ...... .. .. .... . .................................. ..... . . . ............. . . .. . . ............ . ...... ............................................................................... . .. . . .. . ..... ....... . . . ... ... . . .... ..... .... . .... . ... . ... . . .. ........... . .. .. .. ......................... . .. .. ... . ... . ... . . .. . . ........... . .................. . . . .......... . ... .... . . . . . . . . .. . . . .................. ..... . . .. . ....... ... . . ......... . ...... . .... .... . . . . . ............................................ . .. . .......... ..... . . .... . ... . .. ... . . . . ...... ........... . . . . .. ...... ... ... ...... .. . .......................... . . . .. .......... ... ..... ........................ ...... ..... ............. .... . . . ......... ... . . ................ . . . . .... .
lowQualScore : 7777 3 2 2 88888888888888 7 33333333333333333 22 0 7 5555 7 7 5555555555555555 5555 5 22 7 5 0 22 555 7 0000000 7 33333333333333333 3 777 8888 3333333333333333 7 3 7 7 777 7 777 22 2 88888888888 77777777777777 7 5555 7 7 5 5 22 888 55555555555555555555555555555555 3 7 33333333333333333333333333333333333333333333333333333333333333333333333 00 00 8 7 555555555555 3 7 777 22 55555555555555555 333 0 888888888888 8 88 4444 0 88 000 7 7777 5555555555555 5 888 0000000 1 7 00 7 33 2 0 0 2222222222222 2 44 22222222 8 222 00 0 444444444 0 00 4444444444444444444444444 22 000 0 5 5 2 555555555555555555555555555555555555555555 0 000 88 0 0 555555 0 2 0 000 3 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 000000000000 3 0 0000000000000000 3 0 0 00 00 0 0 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 000 0 0 0 00000000 0 0 0 555 5555 0 0000 00000000000000000000000000000000 5 5555555555555 0 0 0 0000 555555555555555 0 55555 00000000000000000000 00 5 00 5 55 7 000 3 00000 3 3 33333 3 3 3 6666666666666 5 0 5 000 8 222 0 0 00000 0 2 2 0 2 888 0 2 55 555 0 88 0 555555 00000 88 0 2222222222222222 0 88 2 0 2 2 2 2 88888888888888888888888888888888888888888888888 88 22 2222222 7 7 3 8888 5 0 0 222 0 000 0 0 0 66666666666666666666666666666666666666666666 0 44444444444444 00 8 0 0 0 00 8 222222 4 44 2 0 0 0 000000 2 88 0 2222222 0 8 0 222 0 0 0 88 88888 88 8888 5555 0 0 555555555 55555555555 0 222222 00 44 8888 0 2222222222222222222222222222222222 88888 0 8 2 0000000000000 0 0 00 0 8 666666666666 0 444444 0000000000000000000000000000000000000000000000000000000000000000000000000000000 0 00 8 8 66 0 22222 5555555 7 7 3 222 777 7 7 2222 77777 3333 0 5555 7 777 7 333 7 7 22 00000000000 7 77 33 22 0000000000000000000000000 8 44 66 000 8 222 8 444 0 0 00 8 0 22222222222 0 444444444444444444 4 0 0 4444444444 8 000 0000 8 2 2 8 2 0 5 0 88 2 5 0 111111111111111111 88888 8 2 00 0 0000000 000 8 0 444444444 4 444444 4 8888 2222 6 6 4 7 0 00000000000000000000000000000000000000000000 0 88 7 7777777777 33333 7 7 2222 2 000 2 88 000 3 5 7 9 777777 11111111111 3 7 7 7 00 999999 000 777 444444 77 7 44444444444444444444444444 7 7 7 22 5555555555 777 77777 000000000000000000000000 555555 77777 7777777777777 2222 7 7 3 333333333 888 5 5 2222222222222222 3 5 7 7 5555 7
consensus : CGCATATTCT--AGC-TTGTCTAGCA-TACGC--GC-ATTT-T-AT-CTCCGGA---------ACT-G---TTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGGGG---GG-GG-TTTGT--TGTT---GCCCATTCT--AT-TATTCCG-GA--AAGTT-T-CATT-CCGC-ATG---G-TTCGAT--AT--TG-TT-A-ACATTTTACTTAG---TC--T-TTT---------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GG---AGTG---TACAATTGC--GTGCCAGG-GAAAACCCTGTAATGT-CTTTGC-A-TCAACTTGAAAAT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AACT-A----TT--T----TTAA-TG-GC--GT----TGT--C-TT-GGTG-CTGAA-TATTACGGA-CTAGCA-TTTA--CGTTATATAATGC-CAG-AAGA-ACGAC-T-C---TGT--TGAA-G------AAAAG----GGGG-GGGGGCGTTCCACG-C-T-CTAA---ACAGTCTCCC-ACGCCATAAC-CTGGACT-AGAGGAC-AAA-GCTTGGTGT-TAATGGGA---ACACAGCGGAGCCGATGA---TA--CTANTCT-C-GTC-TAGA-CCTTCGTCCA-GGA-TATCCCATGTGGGGGAAC--TCAGCCCNACCTC-ACAGCTTT-CA-CGCTCGACNT-CACAG-GC-TGGCGCAT-GCA-TC-CCG-TGCTTGAAG--NTCCC-CGA-ATCCAT-A-CT-AATAA-CCAACTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAAT-AATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--TTG-GCA-TA-CC-CG--TTCATAAC-CGTGTCCA-TTCT-AT-CATAG--CATATTAG-TTACGTTG-CTGGTT----CGTGACATA-T-ATGCTCAG-T--C-TC-ATTCACTC-G-G---GACAA-A--TTT-GCCAAAT-TGTT--GCATAACTT-AAACAACCA---C---A-AC-AAACCA---TAG-CATT--AGCCCTGGA-CGGATG--CATTTCAT-ATATTAT--TTA-CAAGCATATATA-TTGC-TGCTC-ACTCATAGACAACTCAA---TTTA-ATCTCAA-N-TAC-TAAAGTTCGA-CGGGGGG------GCAG-AAAAGTCACAGGGTT-GTC--A--TTA-TGGCGAGCACT---A-----TTTG-TTACATTTGG-CAACAC-GCACCTTAGGGGCTTTGTTTTTTTTTTTAACTACAATGGGTC-TGCTATAGATTCG-TGT-AGGTATTTCAT-CCACCT--GT-CAATCTAC--------------CGTGGAAA-TGGGGTCAAGGGGGGGGGTGTGGGGGGGGGGAACCCAAACAACAC-ACAA--ATTCAAC-TTTGGGCA---GGGGGGTTCATAACGTA-GGTACATAAATCAATTTCATTTTGG-TTAGTGCT-GTAAACCCTGCTGATTCTAAACTTCCAATTTAAATNNATGTAACAGTTTTTNACATTTACACTGCTCTTGATGNTG-GTCTGTGTTTATTTCCCGCAGGCTATGATTCTGAATTAACTT-TCTGCC-CCTAATGATTCTTTGTGCTTGCANGCATGACTATNTTATGATTTGGTATTTTNTATATGACACTGACAGTAACTGTTCACTGTTACATTTTGGTTGTGCTATTTCATGCCATNAATTTTTAAATG-T-TTATCA-TTTTCG-GG-TGGC-TAGTCATGGCACAAATCACTGATTGA-AT-GTTTCATTA-TTGGGC-GATTT--TTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTGATGG-TAG---ATCTTTCAA-CCA--TG-AC-AAAT-CTGTTCAT-----CC--CTACACGT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATATTT-GCCATTA-TGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TT--CT---GATCT-GATCTTCAGAGCCTGGCGGGCAAGC---TAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTT-TACAACA-T-CACGGTTGTGCTCC-TAAGCCA-TCA-------C-ATC--TAT--CAGAATCATTCACACAATGCG-TTA-AGAC-ATCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TTAATGT-TGTGTATTT-TTC-TG---TTAGTGAGT--G-ATTCGTGTA--CGGTG-CTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTA-TTTT-CANG---GTCAA--TGGACCTGACTTTCAGT-GGCCACAAAA-TTGGG-TC-T-CACT--TTCAATCTTAAAACACC-TC-A----ATACATT-TTTAGAACTTGT--ACC-CATTG--TG--CTAGCT-NT-TAT----------CTC--TA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATATTT-CATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACAG----TCATCTAAATCACATCGGG-TTATGTG--GT-CTGTTNTGA-CCACTTATCATTGTGTCT-TACACTCAAATATTCAGTTCCAAAGCCACAACATATCCATGGNAAA--AC-AATAA--TC--C-TGTTTCTATAGCTTA-CAAC-CAGTGG-G-TC---TCCTTCAG-CCAGCTGG-CCGCCT-----AGC----GGC-TACAGC--AGAACAC-AAC---CCT-CAGC---TAC-TCA-T--AG---CCT-CATTCAGAG-GCAGCTTTTTTTCAT--GTGTAATAG-AC----TATTACAATTCTC----GTAAGCAT-ACACCAAAT-AAGCATAATACAGTGGC-TNTTCAGGCAC-TTTCTCTTA-ACATAT--CACACTGGATTATT-AC-A-TATA-TT-AT--TGC--CATATTTTATTCATACAAG-GAT-ACAA-NN-------AATC--CAGTTAAGCNA--TACATTT-CTGCTATTAGTTTT-CAT-GGAAGACA-GTT-CAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCT--N-GCAT-GT-CAGGTA-TAACCT--CCAC-TA-------CAGG--CCAGTTACAATT-ACCTG---GG-GGNTTNGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTCCA-CGCCT--GTCCC----TTACTAGTTGCCGGCTTACTTCAGTACTGCC-CGG-TTGGC--TTAA-TTTAGGTGGGATAG-AC-GT--AGGC-ATTCCAA--TCCCA-CTCTTTAA-TGC--ATTGG--N-GCAGCT-AC----TACCCTTGC-A-CAGCAAGGCATT-GC--AAAT-AAGTTATTCAAGCGCC-AG-GTCAATGG---AGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGTT-AT-TATT------AAT-ATTA------------CATT-CA-TAAG-C--TT--------T-GCG---TAT-----TTA-----T-----AT-----AGC-NNACAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGG---GTTGTCG--GANCCTCCATTAAAAANAG-NACA-G-CAA-GG-GGCTGCCAGATC-CA-GGACAA---GGGGACCAGACCTAATTAA
Reference ( gi|1 ) : CGCATATT-T--AGC-TTGTCTAGCAATATGCCCGCCATTAAT-AT-CTCCGGA---------ACTTG---TTCTCAT--GTCCTT-GTTG-TT-A--TT-ATGAA-AAAGGGG---GG-AGTTTTATG-TGTG---GCCCATTCT--AT-TATTCCGCGA--AAGTTGT-CATT-CCGC-ATT---G-TTCGA---AT--TG-TT-A-ACATTTTACTTAG---TC--T-TTT---------CGGGCCTAAT-AC-G-T-CAC---GAA-TCATGTGCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGCCCAGTG---TACAATTAC--G-GCCAGG-GAAAACTCTGTAATGTCCTTTGC-A-TCAACTTGAAAATCTGTTG--A----T-T--TA--C-C--TG-GA-TT-AACT------TT--T----TTAA-TG-GC--GT----TGT--C-CT-GGTG-CTGAATTATTAC-GA-CTAGC--TTTA--CGTTATATAATGCCCAG-AAGA-ACGAC-T-C---TGT--TGAA-A------GAA------GGGG-AAGGGCGTT-CACG-C-T-CTAA---ACAGTCTCCC-ACGCCACAAC-CTGGACA-AGAGGAC-AAA-GCTTGGTGCTTAATGCGAAACACACAGCGGAACCGATGA---T---CTATTCT-C-ATC-TAGA-CCTTCATCCA-GGA-TATCCCATGCGGGCGGAC--TCAGCCCTACCTCAACAGCTTTTCA-CACTTGACTTTCACAG-GC-TGGCGCATCGCA-TC-CCG-TAGTTGAAGC-GTCCG-CAA-ATCCAT-A-CT-AATAA-CCAATTCTTCGCGTAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCACAAAT-AATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---GATGCATCA-ATTC-A-ATATGGCCC-CATGTTGCGCATTATTCGTGAATTCATAAC-CATGTTCA-TTCT-AT-CATAGCCCACATTAGCCTACGTTGCCTGGTTT-TGCCTGACATA-T-ATGCTCAGATACCGTCAATTCACTC-GCGCCTGACAA-A--TTT-ACCAAATAGGTTCAGCATAACTTAAAACAACCA---CTGAAAAC-AAACCATCTTAGCCATTT-AGCCCTGGA-CGGATGCCCATTTCATAATACTATC-TTA-CATGCATATAGGTTTGC-TGCTCAATTCATAGACAAATCAAC--TTTACATCTCAA-A-TACTTAAAGGGCGG-GGGGGGAGGGGATGCAGAAAAAGTCACAGGGCT--TC--A--TTA-TGGCTAGCACT---A-----TCTG-TAACATTTGG-CAACACAGCACCTTAAGGCATTTG-CTTTTTTTTTAACTACAATGGGTCTTGCTATA-ATTCGCTGTGAGGTA--TCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGAGGTCAAGCAG------GTGGGCCG------CCC-AACAACACAACAATTATAAAACTTTTGGGCAGCGGGGGGATTCATAACGTAGGGTACATGAATCAATTTC-TCCTGGTTTAGTGCTGGTTAACCCTGCTGATTCTAAACTTCCA-TTTAAA-ACATGTAACAGTTTTTATCATTGACACTGGTATTGATGTTGCGTTTGTG-TTATTT--TGC-GACT----TTCTGAATTAACTTTTCTGCCCCCCAATGATTC-TTG-GCCT---TACATG--TATGCAATG----GGT-TTTTA-AT-TGACACTGACAGTAACTGTCAACTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATGCT-TTATCA-TTTTCGCGGTTGGC-TAGTCATGGCCCAAATCACTGATTGACAT-GTTTCATTACTTGGGCCGATTT--TTAAATTCGC-AGCCA-T-GTGGATAGCCAGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAAAT-GTGGG-TGGTGATGC-TAG---ATCTTTCAA-CCA--TG-AC-A--T-CTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCCATCA-TTT--AGA-TTGACACTAATCAATATTTTGCCAGTA-TGATAAAACCTTTGCCGGAAGGAATTTTTAGA-----GTC--AAGGAAC--TT--C----GATCT-GATCTTCAGAGCCTGGTGGGCAAGCCACTAAATGTTTTTTA-CAAAG-C-AT-TTCT-G-CA-GC-GGG-GCGCTTCAGTTCGATTGATTT-TA-GACA-TACACGGTTGCGCTCCATAAGCCA-TCA-------A-AT---TAT--CAGAATCATTCACACAA-GCG-TTA-AGA--ATCAATACCATA-ATCAAGTTTTTAAGAAGGCGGC-TTAATGT-TGTGTATTT-TTC-TGCT-TTAGTGAGT--G-ATTCATATAC-CGGTG-CTGGTGGATTTAGC-TTACT-GGTTGC-GAGCTGTTA-TTTT-CATGCCCGTCAA--TGGACCTAACTTTCAGT-G-CCACAAAA-TTGGG-TC-T-CATT--TTCAATCTTAAAACACC-TC-A----ATACATTCTTTAGAACTTGCCGACC-CATTG-CTG--C-AGC--AT-TAT----------CTC--TA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATATTTTCA-GTGTGCCGAATATGGCCTTAGTACACATT-TT-AACAGA---TCATCTAACTCACATCGCG-TTATGCT--GT-CTGTTGCGA-C--------------------CACT-------TCAGTTCCAAAGCCACAACATATTCATGGGAAA--AC-AATA---TC-AC-TGTTTCTATAGCTTA-CAAC-CAGTGGCGCTC---TCCTTCAG-CCAGCTGG-CCGCCT-----AGCC-CCAGCGTACAGC-CACAACAC-AAC---CCT-CAGC---TAC-TCA-T--AG---C-T-CATTCAGAGCGCAGCTTTTTTTCAT--GTGTAATAGGAC----TATTACTATTCTC-A-CGTAAGCAT-ACACCAAATCAGGCA-A-TACAGTGGCCTTTTCAAGC-C-TT-CTCTTACACATAT--CACACTGGATTATT-AC-A-TATA-TT--T--TGC-CCATATTTTATTCATACAAGCGAT-ACAA-TA-------AATT--CAGTTAAGCCCCTTACATTTTCTGCGATTAGTTTTTCAT-GGAAGACA-GT--CAATTAGGAATCGGCA-CTATACGCGTCGGGCTACC---A-GCAG-GT-CAGGTAATAACCT--CCAC-TA-------CAG---CCAGTTACAATT-ACCTG---GG-GGTTTTGATCACATGAAGAGGG-CAACATATTTTGTCACTTCCATCGCCT--GTCCC---CTTACTAGTTGCCAGCTTACTTCGGTACTGCCCCGG-TTAGCGCTTAA-TT-AGGTGG-ATAG-ACTGTTCAGGCCATTTCAA--TCCCA-CTCTTTAA-TGCCAATTGG--G-GCAGCT-AC----TACCCTTGCTA-CAGCAACGCATT-GCTTAAAT-AAGTTATTCAAGCGCC-AGCGTCAATGGCCGAAATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGTT-AT-TATT------AAT-ATTA------------CATT-CA-TAAG-C--TT--------TCGCG---TAT-----TTA-----T-----AT-----AGC-CAACAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-G---GT--TCG--GAGCCTCCATTAAAAACAGCCACA-G-CAA-TGCGGCTGCCAGATC-CA-GGACAAGGGGGGGACCAGACCTCATTAA
gi|2 : CGCATATTCT--AGC-TTGTCTAGCA-TATGC--GACATTT-T-AT-CTCCGGA---------ACT-G---TTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AGAGGGG---GGGAG------GCTGTT---GCCCATTTT--AT-TATTCCG-GATAAAGTT-T-CATT-CCGC-ATG---G-TTCGAT--AT--TG---------TTTTACTGAG---TC--T-TTTTCTGTG---CGGG---AAT-AC-G-T-CAC---GAA-TCAT-TTCTAGAA--AATCTGG-AA-G-C-A-TGT-TG--CAG-GAATTACAATTGC--GTGCCA-G-GAAAACCCTGTAATGT-CTTTGT-G-TCAACTTGAAAAT-TGTTAT-A----TGT--TA--C-CTTTG-GATTT-AACTAACATGCT--T----TT-A-TG-GCTTTT----TGT--CATT-GGTG-CTGAA-TATTACGGA-CTAGCATTTTA--CGTTAT-CAATGGCCAG-AAG--ACGAC-T-C---TTG--TGAA-G------AAAAGGTAGGGGG-GGGGGCGTTCCACA-CTT-CGAAT--ACAGTCTCCCAACG-CACAACACTGGACT-AGAGGAC-AAACGTTTGGTG--TAATTGGA---ACACAGCGG-ACCGATGA---TGA-CTATTCT-C--TC-TAGA-CCTTTATCTACAGA-TATCCCATG-GGAGGAAC--TCGGCCTAACCTC-ACAGCTTACCG-T-CTTGAC-TTCACA--GC-T-GCGCAT-GCA-TTACCGATGCTTGAAGG-TTCCT-CGA-ATCCAT-AGCT-AATAACCCAATTCT---CGGAG-CGAGTACAGGT-TTAC---------TTA-------TTCGACAC-AAC---GTTGC---AATAAAATATA---TTCTCGGGGCC--CACAAACCA-TTGCACATT---GATG-A-CA-ATTC-A-ATATGGCCCACATGTTG-GCATT-----CGGTTTCATAACTTGTGTTCATTTCT-ATGCATAG--CACATTAGCTT-TGTTG-CTGGTTTGTGCC---CATA-T-ATGCTCAGAT-CCGTCAATTCACTCGGTG---GACAA-A--TTT-ACCAAATTGGTT--GCATAACTT-AAACAACCAATCTTGAATAC-AAACCA--CTAG-CATTTAAGCCCTGGACCGGATG--CATTTCAT-ATACTATCTTTACCATGCATATAGG-TTGCATGC-----TCATA-------------TTTACATCTCAACATTACTTAAA-GGCGG-GGGGG--------GCAT-AAAAGTCACAGG-----TC--A--TTATTGGCTAGCACT---------TCTG-TTACATTTGGCCAACAC-GCACCTTAGGGGCTTTGTTTTTTTTTTTAACTACAATGGGTC-TGCTATAGATTCG-TGT-AGGTATTTCAT-CCACCT--GT-CAATCTAC--------------CGTGGAAA-TGGGGTCAAGGGGGGGGGTGTGGGGGGGGGGAACCCAAACAACAC-ACAA--ATTCAAC-TTTGGGCA---GGGGGGTTCATAACGTA-GGTACATAAATCAATTTCATTTTGG-TTAGTGCT-GTAAACCCTGCTGATTCTAAACTTCCA-TTTAAA-TAATGTAACAGTTTTTTACATTTACACTGCTTTTGATGGTG-GTCTGTGTTTATTT--CCT-GGCTATGATTCTGAATTAAC---TCTG---CCTAATGATTCTTTGTGCTT---GGCATGACTATCTTATGATTTGGTATTTTGTAT-TGACACTGACAGTAACTGTTCACTGTT-CATTTTG--TGTGCTA-TTCATG-CATAAA--TTTGAATG-T-TTATCA-TTTTCG-GG-TGGCTTAGTCATGGCAT-AATCACTGATTGA-AT-GTTTCATTA-TTGGGC-----------AATT--------A-T-GTG-----------------ATCTTC-TTATGCAT-AC-TTTCA-GACTAATGTAATT-GTGGG-TGGTGATG--TAG---ATCTTTCAA-CCATTTG-ACAA--T-CTGTTCAT-----TC--CTACACAT-CTA--G-ATACA-TATCC-TCATTTT--ACATTTGACACTAATCAATA-TTTGCT--TATTGATA----CCTTG--GGAA------TTTAGG-----GTC--AAGGAAC--TTTCT----GATCTGGATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-CTAG-TTCTGG-CAGGC-GGGTGCG-TTCATTTCG-TAGATGT-TACAACA-T-CACGGTTGTCCT-----AGCCACTCACACTATTA-AT---TAT--CAGAATCATTCACACAATGCGTTTA-AGAC-ATCAATACC-TACGTCAAG-TTTTAAGAAGGCGGCTTTAATGT-TGTGTATTTCTTCTTG---TTAGTGAGTTGG-ATTCATG-ACGCGTCG-CTGGTGGATTTAGCTTTA---GGTGGC-GAG-TGTTA-CTTT-CAT
gi|11 : atatCGCATATTCT--AGCCTTGTCTAGCAATGCG-----CATTTATCCT-CTCCGGGTTTTATTTTACTCGGAATTCTCAT--ATCCTT-GTTG-TT-A--TT-ATGAACAAAGGGGGGTGG-GGTTGT----TGTT---GCCCATTC---AT-TATTCCG-GA--AAGTT-T-CATT-CCGCAATG---G-TTCGATAGATTGTG-TT-A-ACATTTTACTTAG---TC--T-TTT---------ATG---TGATAACGG-T-CACAGGAAA-TCATTTCCTCGAC--ATGCTCCGAA-GCC-ATTGT-G--CTGGT----TACAATTAC--GTACCAGG-GAAAACCCTGTAATGT-CTTTGC-A-TAAACTTGAAAAT-TGTTG--ATAATT-T--TAC-C-C--TG-GA-TT-AACTTG----TT--T----TTAA-TG-GCT-GT----TGC--C-TTGGGTG-CTGA---ATTAG-GA-CT-GCA-TTTA--CGTTAT-TAATGC-----AAGAGACGAC-T-C---TGT--TGAAGA------AAA------GGGGTGGGGGCGTTCCACG-C-TCCTAA---ACAATCTCCC--CG-CATAAC-CTGGACT-AGAGGAC-AAA-ACGTGGTTGT--ATG-GA---ACACAGCGGGA-CGATGA---TAACTTTTTCTCC-GTC-TAGA--CTTCAT
gi|8 : ttatCGCATATT-C--TGCATTGTC--GC--TATGTCCGC-ATT--T-ATGCCCTGGA---------ACT-G---TCCTCATTCGTCCTT-GTTG-TTTA--TTTATGAA-AAAGGGG---G-----TTGGT--TGTT---GCCCATTCT--AT-TATTC--CGA--AAGTT-T-CA-T-CCGC-A-T---G-TTCGAT--AT--TGTTT-ATACATTTTACTTAGCGTTT--T-TTT---------TA----TGAT-AC-G-TCCAC---GAA-TCAT-T-CTCGAA--AT----C-A----C-A-CGG-GG---AA------AC-ATTACGTG-GCCAGG-T-AAACCCT-TAATGT-CTTTGCGA-TCAACTTGAAAAT-TG-TG--A----TATTGTA--CTC--TG-GATTT-AACT------TT--TGCCCTTAATTA-AC--ACAAAATG------T-G--G-CTGAA----TAA-GAGCGAG-----TA--CGTATTAT-ATGCGCAG-A--A-ACGAC-T-CCCACAC--CGCG-GCGCGCCGAA------GGGG---GGGGGTT-CACGAC-T-CT-A---ACAG---CCC-ACG-CATAAC-CT-GAC---TAGGACAAAA-G--TAGTGT---ACGTG-AACA---AGGGGA--CGAT-A---TA--CTATT-----ATC-TCAA----TCATCCA-GGATTATCCCA-ATGGGGGAACTTTCAGCCCTACCTC-ACAACACTT-A-CACTTGACTTCCACTG-GCGCGGCGCAT-GCA-TC-CCG-TGCTTGAAGT-CCCCT-CGA-A-CCAT-T-CT-GAT
gi|18 : atatttCGCATATTCT--AGC-T-GTCTAGCA-TATGC--GC-ATTTAT--T-CTCCGGA---------AC--G---GTCTCATT-GTCTTT-GTTG-TTTA--TT-ATGAA-AAAGGGG---GG-----TTGT--TGTT---GCC-ATTCT--AT-ATTTCCG-GA--ATGTT-C-CATT-CCGG-CTG---G-TTCGA---ATATTG-TTTA-ACATTT-ACTTAG---TCCTT-TTT---------CGGG--TAAT-ACCG-T-CAC---GAAATCATTTTCTCGAA--ATTCTGC-AA-GCC---TGT-GGC--AGTG---T-CAATTGC--GTGCCAGG-GAAA-CCCTGTAA-GTC-TTTGC-A-TCAACTTGAAAAT-TGTTGATA----T-T--TA--C-C--T--GA-TT-AACT------TTG-T----TTAA-TGCGC--GT----TGTTCC-TT-GGTG-CTGAA-TATTACGGA-CTActgatctcagagctgcgggcaagtctaaatttttagc
gi|17 : tatCGCATATT-TCTAGC-TTGTCTAGCAG-ATGC--GC-ATT--T-AT-CTCCGGA---------AC--G---GTCGCATT-GTCCTTTGTTGGTT-A--TT-ATGAA-AAGGGGG---G-----TTTGT--TGTT---GCCATTTCT--AT-TATTCCG-GA--ATGGGGTTCATTTCCGC-ATG---GATTCGAT--AT--TG-TT-T-AAATTT-ACTTAG---TC--G-TTT----------GGG---AAT-AC-G-T-CAC---GAA-TCATTT-CTCGAACAATTCTGC-AAAGCCGA-TGTTGGC--AGTGG--TACA-TTGC--GTGCCAGG-GAAAACCCTGTAATGT-CTTTGC-A-TCAACTTGAAATGTTGATG--A----T-TG-TA--C-C--TGCGA-TT-AACT------TTTGT----TTAA-TG-GC--GT----TGT--C-CT--TTGCCTGAA-TA-TACGGA-CTAa
gi|15 : tatATATT-T--AAG-CGGTCTAGCATTGCGC------TTC-T-AT-CTCAGGG-----------CTG---TTATTGT--GTTCTTTGTTG-TT-AATTT-ATGAA-AGAGGAG---GG-GG------G-GGTGTTTGCCCATTTTAAATGTATTCGGTAA--AA--TGT-CATT-C--C-ATCGGGG-TT--G---AT--TA-TT-G-----TTTACTGAG---TT--TGTCTGATGGAGGACGGG---AAT-AC-GTT-CAC---GAA-TCATTTCTTAGAA--AATCTG---G-GAC-A-TCT-------GTG----AGGATTAC--A-GT--GGCGGAATCGTTGTAATGTA--TTGT-AGTC----TGAAA--TTGTTT--A----T-A--TGTCC-T--TGTGA-TTAAACTAAA---TG--C----TTTA-TG-GC--TT----TAT---------TG-CT--ATGGTGAC-GA-CAGAT--TTTATTCGT--TATGATG--CAGTAAGA-TCGACGTGC---TGTTATGAA-A------GGG------GGGG-
gi|14 : tatgcaTTA--CGTTATTTAATGC--AG-AA---ACGAC-T-C---TGT--TGAA-G------AAAAG----GGGG-AGGGGCGTT-CACGGC-T-CTAA---TCAGTCTCC--ACGC-ATAAC-CTGGACT-AGAGGAC-AAT-ACGTGGTGTATAG-----AACACA-GGCGG--CCGATGAAACT---TAATTCT-CTGTCGTAGAACCTTCATT-A-GGA-TATCCCA-ATGGGGGGAA--TCAGC--TACCTCA-CAGCTTTACA-AGCTTGACGT-CACAG--C-GGGCGCAATGCACTC-CCG-TGGCTTAAG--GTCCCTCAA-ATTCATTA-CTTAATA---CGATTCT---CGGAGCCGAGTACAGGTAATA----------TAT-------TTCG-CACAAAC---G-TGCA-AAAT-AATTATACTTTTCTCGGGACCCGCACAAA-CATTTGCACA-TTTGAATG-ATCATATTC-A-ATATG
gi|20 : AATGCC--G-GAGA--CGAAAT-C---TGT--TGAA-G------AAAAAG---GGGG-GAGGGCAAT-CACG-C-T-AAAAAGCACAGTCTCCC-ACGC----AC-C---ATATCGAAGAC-AAA--CTAGGTGTGT--TGGG----ACACAGCGGAG-CGATGG---CA--CTAATCT-C--TC-T
gi|10 : aagGAGGAC-AAA--CTAGGTG--TAATGGGA----CACAGCGGAGC-GATGG---TA--CTAATCT-C-A-C-TAGA-CACTCGTCCA-GTA-CAGTCCATGGGGG---------AGTCCAGCGT--ACAGCT---CA--GCTCAACTC---CAGAGC-TGGTGCA--GC-----CCG-TGCTTGAATCCGTCCC-TAATAGCTAT-A-----ATAA-CCAACTCT---CGGAGCCGAGTACA----ATA-------------------------------------TGCA-AAAT-AATTATA--TTTTTCAGGGCC--CACAAC-CA-ATACACA-T---AATG-ATCA-ATTCTA-ATCTGGTCC-CA--TTG-GCA-TA-TCATG--TTGATAAC-CATGTCCA-TTCTAAG-CATAA-ATATATTAG-TTACATTG-CTGGTT----CGTGACATA--------CAG-----------TCAGTC-G-GTC-AACAA-AAGTTG-GCCAAAT-TGTT--GCATAACTTAAA-----CA---C-----------------TAG-CATTG-AACTCTGGA-TGGATG--TATTTCAT-ATATCAT--TTA-CAAGCATATATA-TTGC-TGCTC-ACTCATAGACAACTCAA-----TA-ATCTTAA-T-TATATAAAATTCGACTGGGGGA-------CAG-AAAATTCACAGGGTTGGTCAAA--TTA-TGGCGAGCACT---AAGTCTTTTGTTTACATTTGG-CAAC
gi|12 : TAATCT-C--TC-TAAA-CCTTCGTCCA-GTA-TATCCCATG-GAG-GAAC--CCAGCCC-ACCGCTA-AGCT---CAACACT-AACAC-CACAG--C-TGGTGAA--GC-----CCG-TGCTTGAA----TCCG-TA-----C-----CT-AATAA-CCAACTTT---CGTAGCCGAGTACAGGTAATGCACTGTTCGTTATCTTTGCCTTCA-CAC-AACAACG-TGCA-AAAT-GATTATA--TTTCTCAGGGCC--CACAAA-CA-TTACACG-T---AATA-ATCA-ATTC-AGATATCGCCC-CA--TTG-GCA-TATCC----ATTC-TAAG-CATA---A------AT---------ATATTAG-CTACATTG-CTGATT----CGTGACATAGTAATGCTCAGTTAGCTTCCATTCACTC-G-----GTCAACA--TTTGGCCAAAT-TGTT--GCATAACTC-AAACAATC--------AAACAAAACCA------CTAT----------------ATG--CATTTCAT-ATATTAT--TTA-CAAGCATATATA-TTGC-TGCTC-ACTCATTGACAACTCAACAATTTA------AA-G-----TAAAGTTCGA-CTGGTGGGGG---GCAG-AAATGTCACAGGGTTTGTC--AACTTA-TGGCGAGCACTTCCA-----TTT----ACATTTGG-CAAC
gi|3 : ATTCTAAACTTCCAATTTAAATACATGTAACAGTTTT-A--ATTTACACT--TCTTGATGT---G---GTG-TTATTTCCTGCAGA------TTCTGAAT-AACTT--CTGCC----AATGATTC-TTG-GCTTGCATACATG--TATG--ATG----GGT-TTTTT-ATATGACACTG------------------TACATTTTGGTTGTGCTATTTCATGC-ATCAATTTTGAAATG---TTATCA-TTTTCG-GGT-GGC-TAGTCATG---CAAATCACTGATTGACAT-GTTTCATTA-TTGGGC-GATTT--T-AATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-T-ATGCAT-ACATTTCA-GACTAATGTAA-T-TTGGG-TGGTGATG--TAG---ATCTTTCAA-CCA--TG-ACCA--TACTGTTCATT----CC--CTACACAT-CTA--GCATA-AT-ATCC-TCA-TTT--TAA-T-GACACTAATCAATATT--GC-ATTA-TGATA---CCTT----GG--GAAATTT----A-----GGC--AAGGAAC--TC--T----GATCT-GATCTTTAGAGCCTGGTGGGCAAGC---TAAATGTTTTTTA-CAAAG-C-ATATTCT-GGCA--C-GGG-GCG-TTCA-TTCG--TG---T-TACAACA-T-CACGGTTG-G-TCC-TAAGCCA-TCA-------C-ACA--TAT--CAGAATCAT---CACAATGCG-TTA-AGAC-ATCAATAC--TA-GTCAAGTTTT-AAGAAGG-GGC-TTAATGT-TGTGATTTT-TTC-TG---TTAGTGAGT--GGATTCATGTTA-CGGTG-CTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTA-TTTTTCA-G---GTCAA--TGGACT--ACTTTCAGT-GGCCACAAAA-TTGGG-TC-TTCACT--TTCA---TTTAAACACC-TC-A----ATACATT-TTTAGAACTTGT--ACC-CATTGTCT-----AGC--TA-TATT---------CTC--TA-----GGG-GTTGTAGGAGGC------------ATGGC-TAG--C-ATATATTT-CATGTGTGC--AATATGGCCTTGGTACACATT-TTTAACAG----TCAT---ACTCA--TCG-G-TTATGTG--GT-CTGTTG-GA-C--------------------CACT-------TCAGTTC-AAAGC-ACAACATATTCATGG-AAA--AC-AATAA--TC--C-TGTTTCTATAGCTTA-CAAC-CAGTGG-G-TC---TCCTTCAG-CCAGCTGG-CC--CT-----AGC----AGCGTACAGC--ACAACAC-AAC---CCT-CAGC---TAC-TCA-T--AG---CCT-CAT-CAGAG-GCAGCTTTTT--CAT--GTGTAATAG-AC-----ATTACAATTCTC----GTAAGCAT-ACACCAAAT-AGGCA-AATACAGTGGC-TTTTCA--C-C-TTTCTCTTA-ACATAT--CACACTGGGT-AT--AC-A-TATAATTA-T--TGC---ATATTT-ATTCATACAAG-GAT-ACAA-TA-------A-TC--CAGTTAAGC----TACATTT-CTGCTATTAGTTTT-CAT-G-AAGACA-GTT-CAATTAGGAATCGGCAACTATAC-TGTCGG--TACC---TTGCAT-GTTCAGGTA-TAACCT--CCACATA-------CAGG--CCAGTTACA-TT-ACCTG---GG----TTTGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTCCA-CGC-T--GTCCC----TTACTAGTTGCC-GCTTACTTCAGTACTGCC--GG-TTGGT--TTAA-TTTAGGGGG-ATAGTAC-GT--AGGC-ATTCCAA-----CA--TCTT-AA-TGC--ATTTG--G-GCAGCT-ACATACTACCCTTGC-A-CAGCAAGGCATT-GCT--AAT-AAGTTATTCAAGCGCC-AG-GTCAATGG----GATCGGTC-----------G-GAATCGGC-TAT-A-TAT-C--C-CCA---AG---AT------TGT--AT-TATTT-----AAT-ATTA------------CATT-CA-TAAG-C--TT--------T-GCG---TAT-----TTA-----TTTT--AT-----AGC-ATACAT---AC--ATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-G---GG--TTGTCGAGCCTCCATTAAAAACAG-CACA-G-CAA--G-GGCTGCCAGATC-CA-GGACAA---GGGGACCAGACCTCATTAA
gi|4 : TAAATGTTATCATCAATTTTAGAG--TGGT-T-GTCATTGCA-AAATCAGTGATTGA-ATCGTTTCATTACATAGGC-GATTTCATT---TTTGC-AGACAGT-ATGTATA-TCAGCCATTGTGATCT----TATGCAT-ACATTTCA-GTCTA-TGTCATT-GTGTG-TTGAGATGGGTAT---ACCTTTGAA-CCA--TG-AC-AAAT-CTGTTTAA-----CCTGCTACATGT-TTA------ACATT-TCT-TCG-TTTGGAGA-TTGACACTAATCAATATT----CA-TA-TGAGAATACCTT----GG--GAAATTT--AG------GTC--AAGGAAC--TT--CTG--AATCT-GATCTTCAGTGCCTGGTGGGCAAG--A-TAAATGTTTTTAG-CAAAGCC-AT-TTCTGG-CA-GC-AGG-GCG-TTCAGTT--GTAGATTT-TACAACG-C-CAGGATTGGACT---TAAGCCA-TCA-------C-ATCA-TAT--CAGAATCATTTACATAATGCG-TTA-AGAC-ATAAATA-CATG-GTTAAGGTTTT-AGAAGGa
gi|6 : TT--TTAATTTCGCTAGCCA-TTGTGGATAGC-AGCAATGGTGATCTCCCTTATGCATGACATT-CATGACTAATGTAATTTGTGGGGTGGTG--GA-TAGCGAATCTTTCAAACCA--TGGAC-AAAT-CTGTTCATAGTTCCC--CTACACATGCTAAGGCATGCAT-ATCC-TCA-TTTT-AGA-TTGACACTA-TCA-TATTT-GC-ATTA-TGA--ATACCTT----GG--GGAAATTTTAGGTCAAGGTCTTAAGGAAC--TT--CCTGAGATCT-GATCTT-AGAGCCTGGTGG-CAAGCTA----ATGTTTTT-A-CAAAA-CCAT-TTCT-G-CA-GCAGGG-GCG-TTC-TTTCG-TTGATTTATA--ACA-T-CACGGTT-TGGTCC-TAAGCCA-TCA-------ACAC---TATATCAGAATCCATCACACAATGCG-TTA-AGACAATCAATAC-ATA--TCAGGTTTT-AAGAAAGGGGC-CTAATGT-TGTGTATTT-TTT-T-CTGTTAGTGCGTG-G-ATTCGTATA--CGGTG-CTGGTGGATTTAGC-TTACTAGGTTGC-GAG-TGTTATTTTT-CAGG---GTCAATGTGGACCTGAATTTCAGTGG-CCACAAAA-TTGGG-TCTT-CACT--TTC-ATCTTAATACACCATC-AATTTATACAT--TTTAG-ACTTGT--ACCGCATTG--TGGTT-AGCTAAT-CA-----------CTC--TA----TGGG-G-TGTTGGAGG------------CATGGC-TAG--CAATATATTTTCATGTGTG-CAAATATGGCCTTGGTACACATT-TTAAACAG----TCAT-------ATATCGGGTTTATG-T--GT-CTGGTTTGA-C--------------------CACT-------T-AGTT-CAAAG-CACAACATATTCATTGGACACCAT-AATA---CCTGT-TCTTTCTTAAGCTTA-CAACGCAGTGG---TC---TCCTTCAG-CCCACTGG--CGCCT-----AG----CAGCGTACAGCACAGAACAC-AAC---CCTGCAGCT--TACTTCA-TGCAGAGCC-T-CA-CCAGAGGGCAGC--TTTTTCATTGGTGTAATgatttttattggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaaccccctgcaactgttcacggacagtgctgtttgatatagcctaggttgctcgtgttattttaaaggtcaatgggcctagtttcagtggccacaaaatggggtctttacttcaatcttaaagacattattacgtttttagaacttgtacccattgtgctagctgtttcagtatggggttgtagaaggcaaaacataacatatatttcatgtgtgcaatatgacattcttaacaaacagtcatctaaatcacatcgggttatgtggtatgttagaccacttatcattgtgtctttacactcaaatattcagttcaaagcacaacatatccctgacaaaacgaataaattcctgattctacatcttgcaaacagtagattttgttcaggcagctggtgcctagcggcctacagcagaccataaccctcagcttatcctagcttcattcaggggcagctatttcaagtgttacattttatcgttgtaaggaaacaccaaagaagcatatacagtggctattcaggtatttcccctaacacatgacactggatattacaatacatttattgcatatttattcatacatggatacgagtaatccagctaaaacatacatttctgcaattagttttcattgaatacatatctattaggaatcggcaccatactgtcggtactaagcatgttaggaataatttgtccagttcaggccagggataattacatggggggttcgatcacagaaagcgggataactattttgtcacttctcagttccgctcttaatcgttgccagtttattcccgtactgtcacggtcgcttagtttagctgggataaacagtaggtatttcaaatcccactctttatgcattggcgcagctactacgcttgcacagtaaggcatggaaaatcaagttattcaaacggtaagtcgatgagatcggtcgcgaatcagttttacatccgttaagattgttattattacatttataaaccttgtgtatttatattgtatagcaaacgtaacgttcattaaatttttcacaggtaaaattcatatctgggttgtcagatcctccatcaaaaagagaacagctagggctgcaatatccaggacagggagaccagacc
gi|8 : gggcgcGAACCATT--CT---GATCT-GATC-TCAGAGCT--GCGGGCAAGT--CTAAATTTTT
gi|5 : atatttcgcatattctgcattgtcgctatgtccgcatttatgccctggaactgtcctcattcgtccttgttgtttatttatgaaaaagggggttggttgttgcccattctattattccgaaagtttcatccgcatgttcgatattgtttatacattttacttagcgttttttttatgatacgtccacgaatcattctcgaaatcacacggggaaacattacgtggccaggtaaacccttaatgtctttgcgatcaacttgaaaattgtgatattgtactctggatttaacttttgcccttaattaacacaaaatgtggctgaataagagcgagtacgtattatatgcgcagaaacgactcccacaccgcggcgcgccgaagggggggggttcacgactctaacagcccacgcataacctgactaggacaaaagtagtgtacgtgaacaaggggacgatatactattatctcaatcatccaggattatcccaatgggggaactttcagccctacctcacaacacttacacttgacttccactggcgcggcgcatgcatcccgtgcttgaagtcccctc--TT--CT---GATCT-GATCT-CAGAGCT--GCGGGCAAGTC--TAAAT---TTTTAGCAACC-T-AT-TTCT-GGCA-GC-AGG-GCG-TTCA-TTCGAT-GATTT-----ACAACACACTGTT----TC--TAAGCCA-TCA-------C-ATCTATAT--ATGTATCATTCACACAATGC--TTAGAGAC-ATCA-TAC-ATA--TCAA---TTTAAGAAGG--GC-TTAATGTGTGTGTATTT-TTC-TG---TTAGTG-GT--G-ATTC----------TGACAGGTGGATT-------A---GGTTGCCGAG-TGTTA-TTT--CATG---GTCGA--TGGACT--ACTTCGAG----CTACAAAAGTTGGGGTC-T-TCCT--TTCA---------CACC-TCGA----ATACATCTTTTAGA-CTTGTAG-CC-CATTG--TG--TTAGC--CTATAT----------C-C--TA----TGGGCGTTGTAG----------------CATGGC-TAG--C-AT-TATATACA----TGC--AATATGGCCTTTGAACA---------ACA----------TAAACCAC---GGT-TTATG-TAAGTACTGGTTTGATC--------------------CACT-------TCAGTTCCAAAGACACA-------CA--GGAAA--ACCAATA---AT-ACCTGTTTCTATAGCTTA-ACACACAGTGGGGTCCAACTCCTTCAGACTGACTGGACCGCCTCATGCAGCCGTCA-C-TACA-T-CATAACAC-AACACACCT-CAGCGACTAC-TCAAT--AG---CCT-CAT-AAGAG-GCAGCTTCTTTTCAT--GTGTAATAG-ACG---TATTACAATTCTC----GTAAGCAT-ACACCAAAT-AGGCA-AATACAGTGGC-TCTTCAAGCAT-TT-CTCTTA-ACAAAT--CACACAGGATAAA--AC-A-TATA-TTGAT--TGC---ATATT--GTTCATACAAG-GAT-ACAAATATTGAAATAATC--CAGTTAAGCG---TACATTT-CTGCTATTAGTTTT-CAT-GGAAGACA-GTT-CAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCT--G-GCAT-GT-CAGGTA-TAACCT--CCAC-TA-------CAGG--CCAGTTACAATT-ACCTG---GG-GGTTT-GATCACATAAGGAGGGGCAAC-TATTTTGTCACTTCCA-CGCCT--GTCCC----TTACTAGTTGTCGGCTTACTTCAGTACGGCCCCGG-TTGG---TTAATTT-AGGTGG----G-A----------CATTCCAA--TCCCA-CTC-TTAA-TGAGCATTGGCTG-GCA-CT-AC----TCACCTTGC---CAGCAA-GCATT-GC-TAAAT-AACTTATTCAAGC-CC-AA-ATCAATGG----AATC-GTCAGA--------GCGA--TGTC-T-T-ACTATAT--C-CCA---AGC--AT------TGTTCAT-TATT------agc
gi|4 : cca-CAGTG-CTGTTTGATATAGC-CTA---GGTTGC-TCG-TGTTA-TTTT-AAAG---GTCAA--TGGGCCTAG-TTTCAGT-GGCCACAAAA-TGGGG-TC-T---TTACTTCAATCTTAAAG-ACA-TT-A----TTACGTT-TTTAGAACTTGT--ACC-CATTG--TG--CTAGC-----TGT----------TTCAGTA----TGGG-GTTGTAGAAGGC-----------AA-AACATAA--C-ATATATTT-CATGTGTGC--AATATGACATTCTTA-ACA------AACAG----TCATCTAAATCACATCGGG-TTATGTG--GT-ATGTTA-GA-CCACTTATCATTGTGTCTTTACACTCAAATATTCAGTTC-AAAGC-ACAACATATCCCTGACAAA--ACGAATAAATTC--C-TGATTCTACATCTTG-CAAA-CAGTAGA--TT---TTGTTCAG-GCAGCTGG-T-GCCT-----AGC----GGCCTACAGC--AGACCAT-AAC---CCT-CAGC---TTA-TCC-T--AG---C-TTCATTCAGGG-GCAGCTATTT--CAA--GTGTTACA--------TTTTATCGTT-------GTAAGGAA-ACACCAAAG-AAGCATA-TACAGTGGC-TATTCAGGTAT-TT-CCCCTA-ACACAT--GACACTGGAT-ATT-AC-AATACA-TT--TATTGC---ATATTT-ATTCATACATG-GAT-ACGA-GT-------AATC--CAGCTAAAACA--TACATTT-CTGCAATTAGTTTT-CAT-TGAATACATAT--CTATTAGGAATCGGCA-CCATAC-TGTCGG--TACT---AAGCAT-GT-TAGG-AATAATTTGTCCAG-TT-------CAGG--CCAGGGATAATT-ACATG---GG-GGGTTCGATCACAGAAAGCGGGATAAC-TATTTTGTCACTTC--TCA-----GTTCCGCTCTTAATCGTTGCCAGTTTATTCCCGTACTGTCACGG-T---CGCTTAG-TTTAGCTGGGATAA-ACAGT--AGGT-ATTTCAAA-TCCCA-CTCTTTA--TGC--ATTGG--C-GCAGCT-AC----TACGCTTGC-A-CAGTAAGGCATG-GA--AAATCAAGTTATTCAAACGGT-AA-GTCGATG----AGATCGGTC-----------GCGAATCAGT-TTT-AC-AT-C--CGTTA---AG---AT------TGTT-AT-TATT------A-------------------CATT-TA-TAAA-C--CT--------T-GTG---TAT-----TTA-----T-----ATTGTATAGC-AAACGT---AA-CGTTC-----AT-------------TAAAT----TTTT-CACA-GGTAAAATTCAT-ATCTGG---GTTGTCA--GATCCTCCATCAAAAAGAG-AACA-G-C---TAGGGCTGCAATATC-CA-GGACA---GGGAGACCAGACC
gi|9 : taaatgttatcatcaattttagagtggttgtcattgcaaaatcagtgattgaatcgtttcattacataggcgatttcatttttgcagacagtatgtatatcagccattgtgatcttatgcatacatttcagtctatgtcattgtgtgttgagatgggtatacctttgaaccatgacaaatctgtttaacctgctacatgtttaacatttcttcgtttggagattgacactaatcaatattcatatgagaataccttgggaaatttaggtcaaggaacttctgaatctgatcttcagtgcctggtgggcaagataaatgtttttagcaaagccatttctggcagcagggcgttcagttgtagattttacaacgccaggattggacttaagccatcacatcatatcagaatcatttacataatgcgttaagacataaatacatggttaaggttttagaagggatttttattggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaaccccctgcaactgttcacggaTACATT-TTTAGACCTTGT--ACC-CATTG--TG--CTAGCT-AT-TGTAGGAGTGGGATTG--TAGGAGTGGG-ATTGTAGGAGGCAAAACAAAAAACAAAAC-AAAAAC-ATATATTT-CATGTGTGC--AATATGGCCTTAGTACGCATTCTT-AACAAAGAGTAATCTAAATCACATCAGA-TTATGTG--GT-CTGTTA-GA-CCACTTATCATTGTGTCTCTACACTCAAATATTCAGTTC-AAAGC-ACAACATATCCCAGGTAAA--CC-AATAAATTC--C-TGATTCTATATCTTG-CAAA-CAGTGG-G-TC---TCGTTAAG-GCAGCTG--TTGCTT-----AGC----GGCCTACAGC--AGACCAC-GAC---CCT-CAGC---TAC-TCC-T--AG---CTT-CATTCAAAG-GCTGC--TTTTTCAA--GTGTAATA-GACCATTTATTACAATTGTC-GTTGTAAGTAA-GCACTAAA-GAAGCATA-CACAGTGG-CTATTCAGGC-CTTT-CCCCTA-ACATATGGC-CACTGAA-TATTGACAA-TACA-TTTAT--TGT-ACA---CTTATCCATACATG-AAT-ACAA-AC-------AATCCACAGCTAAAACA--TACA-TCTCTGCTATTTG-TTTTCAT-
gi|7 : tAAA--CC-AATAAT-TC--C-TGTTTCTATAGCTTAACAAC-CAGTGG---TC---TC-TTCAG-CCAGCTG---CGCCT-----AGC----AGC-TACAGC--A-AACACTAAC---CCT-CAGC---TAA-TCA-T--AG---C-C-C--TCATCGAGCAGCTTTT---CAT--GTGTAATAG-AC----TAT-ACAATTCTCGA-AG--AGCATTACACCAAATAAAGCA-AATACAG-GGCAT---CAAGC-C-TTTCTCTTA-ACATAT--CACAC-GAATTACC-A-----ATA-TT--A--TGCATCAT----TATTCATACAAG--ATTACAA-AT-------AATC--CATTTAAGCG---TACATTT-CTGCTATTAGTTTT-CATCGGAAGACA-GTTTCA-TTAGGAATCC-CA-CTATAC-TGTC----TACCTCGG-ACAG----TAAGTA-TAACCT--CCAC-TA-------CAGGTTTCA-TTACAATTCACCTG---G----TTTGGATCACATGAAGAGGGACAAC-TATTAT-TCACTTCCACGGCCT--GTCCC-------------------TTACCT-AGT--TGCC-------AGC--TTAC-TT-CAGT--------AATGT--AGGC-ATTCCAA--TCCCA-CTCT--AACTGC--ATTGG--G--CA-CT-AC----TACCCTTGC-A-CAGCAAGGCAT--GC---AAT-AAGT-AT-CAAGCCCC-AG-GTCAA-----GA---CGGTC------------CGAATCG-C-TA--A-TAT-C--C-CCA---AGTAAAT------T--T--T-TATT------AAT-ATTA------------CATT-CATTAGG-C--TT--------T-GGG---TAT-----TTATTTACT-----AT-----AG--CAACAT---ACACACTC-----AT-------------TAAGT----TTTT-CACA--GTCAATTTAATAATCT-GCTTGT--CTA--GAGCCT-CATTAAAAACAG-CACA-G-CAG----GGC-GCC-GATC-CATGGACAA----GGGACCAGACCTAATTAAtg
gi|13 : TACC---T-GCATTGT-CAGGTA-TAACCT--CCAC-TAGGCACTACAGG--CCAGTTGCAATT-ACATGCATGGTGGGTTGAATCACATGAAGAGGGGCAAT-TATTTTGTCACTTCCA-CGCCTCTGTCCA---TTTACTAGTTGCCAGTCTACT-CAGTACTGCCCCGGGTTGG---TTAA-TTTAGGTGGGATAG-CCTGT--AGAC-ATTCAAA--TCCCATCTCTC---------ATTGG--TTGCAGCTTAC----T-CCCTTATCAGCAGCAAGGCATTTGGT--AAT-AAGTTATTCA-GCGCCCAGGTTCAATGA---GGATCGGTC-----------GCGAATCGTC-TAT-A-TAT-C--C-CCC---AG---AT------TGTT-AT-TATTT-----AATTATTA------------TATTTCA-TAAGGC--TT----------GCG---TAT-----TTA-----TTTTATAT-----AGC-ATACAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-G---GTTGTCG--G-GCCTCCATTAAAAACAG-CACATG-CAAGGGCAGC--CCAGATCTCA-GGACAA--CGGGGACCAGACTT
gi|16 : gTACTTCCGTACTGCCACGG-T---CGCTTAA-TTTAGCTGGGATAG-ACAGT--AGGT-ATTTCAAAGTCC-A-CTCTTTAG--GC--ATTGG--C-ACAGCT-AC----TACTCTTAC-A-CAGCAAAGCATT-GC--AAATCAAGTTATTCAAGCGGC-AG-GTCAATG----AAATTGGTC-----------GCGTATCAGT-TAT-AC-AT-T--TGCTA---AG---AT------TGTT-AT-TATT------AAT-A--A------------CATT-CA-TAAG-CCATTGATACGCCTTGTG---TATTTATATTA-----T-----AT-----GGCATACCAT---A--CATTT-----AT-------------TAAGT----TTTT-CATA-GGTCAAATTAAT-ATCTGG---GTTGTCA--GATCCTCCATTATAAAGAG-GACA-G-CAG-GGC--CTGCCAGATC-CA-GGACA---GGGGGACCAAACCTttctt
gi|19 : gtgC-AGGATCAATGG----AATCGGTTCAGTTCTCTAAGCGAATCGGCCTATTAATAT-CTAC-CCGTAGAG---ATAATGGGTGT--ATATATTCTCTACAAT-TTTATTCTATAACGACCCTT-CA-TAAG-C--TT--------T-GCGTATTAT-----TTA-----TG----AT-----AGA-TGACATTACAT-CATTCTTCCAATTTCACCACCTTAATAAGTATACTTTTGCACAGGGTCAAATTAATAATt
gi|21 : --TCA--GATCCTCCATTATAAAGAG-GACA-GTCAA-AG-GG-TGCCA-ATC-CA-G--CA--GCGGGGACCAGACTTAAT
Alignments
lowQualScore : 11111111111111 1111111111111111111111111111
lowQualScore : 1111 22222 2222222222222222 11 1 2222222222 1111 111 111 4444444444444 1 111 4444444444444444 222222222222 11 1 1 3333333333333333 22222222222222222 222 1 111 222 1 22222222 11111 111 333 1111 3333 1 111 111 1111 22 222 333333333 1 11 1111 333333333333 111 111 66666666666666666666 11111 111 11 111 1 11111 1 77777777777777 111 1 333 3333 11 1 111 1 1 11 999999999999999999999999999999999 1111 1 111 11 1 999999999999999999999999999999999999 11 11 1 1111 1 1 1 111 333333 2222222222 2222222222 444444444 1 22222 11111 1 55555555555555 1 2 1 2 1 2 2 11 2 22 2 11111111111111 2 222222 222222 1 2 22 2 333 2 1 2 2 11 222 1111 11 1 1 1 2 666666666666 2222 222222 2222 111 6666666 2222 11 2 11 11 1 222 1 1 1 1 111 2 1 111 1 111 11 1 22222 11 1111 111 11 2222 1111 11 11 22222 11 11 1111 222 1 222 2222 3333333333 111111 1 11 11 1111 11 222 111 11 22 111 111 1111 33333333333333333 1111 3333333333333 1 11 222222 111111 1111111 11 11 11 7777777777777777777777777777 11 11 2222 111 1 111 1111 111 11111 111 22222 11 111 111 1111 11 2222 111111 1 22222 111111 1 333 11111 22222222 3333 11 11 2222222 111 1111 1111 2222222 11111 22222 111111 222 1111 111 1 1 111111 33333333333 11 1 111 111111 11111 1 222222222222 22222222222 111 11111111111 33333 111111 11111 3333333333333 1111 1 11 11 222
lowQualScore : 5 5 5 5 1111 77 77 5 5 11111 5 6666666666666666 7 00 5 5 1 77 5 5 5 0000000000 5 0 77 5 5 77 77 5 5 5 5 0 5 7777 77 5 333 1 8 000 77 8888888888888 5 1 5 5 000 5 6 77 1 66666 4 999 7777777777777777 1 0 5 5 0 1 5 5 5 5 5 1 777777777777 33 5 77 1 1 5 5 8888888888888888 1 5 5 11111111111111111 5 0 5 1 888 4 1 333 99 3 1 0 5 222 5 555 1 5 00000000 5 22222 9 6 6 6 6 888 6 222 6 2 3 5 5555 5 4444 1 000 5 222 1111 66 1 5 44 5 5 0 1 6 6 000 99 1 7 6 222222222 9 1 3 33 6 0000 6 6 6 6 6 777777777777 3 6 888 99 6 111 1 5 55555555555555555555 8 8 77777 8 0 111 11 8 8 8 444 8 0 8 8 8 0 88888 0 22222222222222 2 444 0 333 1111 22 0 777 0 0 33 2 555555555555555555555555555555555 4444 0 777 33 0 33 666666666666666666666666666666666666 6 0 2 00 33 0 4444 0 3 0 0 111 3 2 444444 0 7777777777 8888888888 000000000 0 2 00000 88888 0 2 00000000000000 0 0 55 5 0 5 0 0 88 0 77 0 77777777777777 0 2 888888 55 888888 5 0 77 66 0 555 0 5 0 0 4 44 222 9999 33 3 4 3 2 3 444444444444 7 7777 777777 4444 111 6666666 8888 99 88 3 7 00 4 7 6 7 33 1 7 0 000 0 0 0 0 3 2 222 0 0 444 8 0 0 5 22 8 8 8 5 8 0 0 3 8 0 8 0 0 8 0 8 8 8 666 8 11 8 5 88888 11 2 8 6666 222 8 8 99 8 0 0 0 8 0000 0 6666 7777 11 11 11 00000 11 33 0000 5 5 1 5 1 111 0 3 6 6 3 6 888 6 6 6 6 7 6 1 7 1 88 2222 1 6 6 6 7777777777 6 6 6 6 6 888888 7 3 3 1 6 8 8 11 8 11 5 7777 9 88 6 6 6 6 000 6 6 6 1 444 11 33 55 8 8 8 222 0 222 1 1 8 8 7777 6 6 3 99 6 6 6 6 66666666666666666 3 4444 6 1 6666666666666 3 6 99 6 3 55 1 000000 999999 0000000 11 11 6 99 1111111111111111111111111111 33 77 2 3 7 1 5 3333 5 000 5 1 666 2222 4 5 777 44444 000 2 88888 33 7 5 000 5 555 5 5 2222 5 888 5 5 77 1 77 6 0000 6 333333 6 6 6 6 9 6 7 77777 6 99 3 666666 888 6 6 3 111 22222 6 88 44444444 99 2222 6 6 11 6 1 8 8 99 11 6 6 6 99 6 1111111 99 6 111 7777 1 6 6 6 6666 6 6 6 9 3 1 3 0000000 88888 666 55555 77 5 5 77 4 55 666666 77 000 4 7777 1 5 999 3 5 999 1 66 5 0 888888 22222222222 0 5 0 5 55 5 66 0 888 333 444444 00000 0 888 5 999999999999 5 5 77777777777 5 000 99999999999 88888 5 77 5 666666 44444 1111111111111 2222 5 5 5 5 22 1 1 66 5 5 1 55 77 5 0 5 5 111 3
lowQualScore : . . . . .... .. .. . . ..... . ................ . .. . . . .. . . . .......... . . .. . . .. .. . . . . . . .... .. . ... . . ... .. ............. . . . . ... . . .. . ..... . ... ................ . . . . . . . . . . . . ............ .. . .. . . . . ................ . . . ................. . . . . ... . . ... .. . . . . ... . ... . . ........ . ..... . . . . . ... . ... . . . . .... . .... . ... . ... .... .. . . .. . . . . . . ... .. . . . ......... . . . .. . .... . . . . . ............ . . ... .. . ... . . .................... . . ..... . . ... .. . . . ... . . . . . . ..... . .............. . ... . ... .... .. . ... . . .. . ................................. .... . ... .. . .. .................................... . . . .. .. . .... . . . . ... . . ...... . .......... .......... ......... . . ..... ..... . . .............. . . .. . . . . . .. . .. . .............. . . ...... .. ...... . . .. .. . ... . . . . . .. ... .... .. . . . . . ............ . .... ...... .... ... ....... .... .. .. . . .. . . . . .. . . . ... . . . . . . ... . . ... . . . . .. . . . . . . . . . . . . . . . . . . ... . .. . . ..... .. . . .... ... . . .. . . . . . .... . .... .... .. .. .. ..... .. .. .... . . . . . ... . . . . . . ... . . . . . . . . . .. .... . . . . .......... . . . . . ...... . . . . . . . .. . .. . .... . .. . . . . ... . . . . ... .. .. .. . . . ... . ... . . . . .... . . . .. . . . . ................. . .... . . ............. . . .. . . .. . ...... ...... ....... .. .. . .. ............................ .. .. . . . . . .... . ... . . ... .... . . ... ..... ... . ..... .. . . ... . ... . . .... . ... . . .. . .. . .... . ...... . . . . . . . ..... . .. . ...... ... . . . ... ..... . .. ........ .. .... . . .. . . . . .. .. . . . .. . ....... .. . ... .... . . . . .... . . . . . . . ....... ..... ... ..... .. . . .. . .. ...... .. ... . .... . . ... . . ... . .. . . ...... ........... . . . . .. . .. . ... ... ...... ..... . ... . ............ . . ........... . ... ........... ..... . .. . ...... ..... ............. .... . . . . .. . . .. . . . .. .. . . . . ... .
lowQualScore : 7 7 7 0 1111 99 99 7 7 33333 7 6666666666666666 1 77 0 7 4 99 7 7 7 6666666666 7 7 99 7 7 99 99 7 7 7 7 7 7 3333 99 7 333 4 4 000 99 1111111111111 7 4 7 7 000 7 6 99 4 77777 3 444 6666666666666666 4 1 7 7 1 7 7 7 7 7 7 7 444444444444 66 7 99 4 4 7 7 7777777777777777 7 7 7 11111111111111111 7 7 7 4 666 3 4 888 22 5 7 1 7 111 7 666 4 7 77777777 7 33333 3 7 7 7 7 333 7 555 7 5 2 7 3333 7 4444 4 000 7 333 6666 99 0 0 00 0 7 7 4 7 7 777 22 0 5 7 222222222 0 0 3 33 7 0000 7 7 7 7 7 555555555555 7 7 333 88 3 777 0 6 88888888888888888888 0 0 00000 0 8 888 00 0 0 0 000 0 8 0 0 0 0 55555 0 88888888888888 5 555 0 000 8888 22 0 555 0 0 22 5 555555555555555555555555555555555 8888 0 000 88 0 55 222222222222222222222222222222222222 5 2 5 22 88 0 8888 0 0 0 0 222 5 5 222222 2 2222222222 0000000000 000000000 0 5 22222 55555 0 5 88888888888888 0 0 00 5 0 0 0 0 55 0 55 0 55555555555555 0 5 000000 00 555555 5 0 55 55 0 000 0 5 0 0 0 77 333 3333 33 7 0 3 0 7 333333333333 3 0000 333333 3333 333 0000000 7777 77 33 7 3 77 0 3 7 3 33 0 3 0 888 0 0 0 0 2 5 888 0 0 888 0 8 8 4 00 0 0 0 0 0 6 6 2 0 8 0 8 8 0 8 0 0 0 222 0 00 0 4 00000 00 8 0 0000 222 0 0 00 0 8 8 8 0 6666 8 2222 0000 00 88 22 00000 00 66 1111 7 7 7 0 4 444 7 5 7 7 3 7 333 7 7 7 7 3 7 0 3 0 33 5555 0 7 7 7 8888888888 7 7 7 7 7 777777 2 5 3 0 7 0 0 00 0 00 6 0000 0 00 7 7 7 7 888 7 7 7 0 000 00 88 88 0 0 0 444 8 000 0 0 0 0 0000 7 7 2 22 7 7 7 7 88888888888888888 5 2222 7 0 7777777777777 5 7 22 7 3 88 0 222222 222222 8888888 88 88 7 00 8888888888888888888888888888 33 55 2 5 5 3 7 9999 7 000 7 4 666 1111 3 7 666 33333 000 7 66666 66 9 7 000 7 777 7 7 1111 7 000 7 7 00 4 99 7 8888 7 555555 7 7 7 7 5 7 5 77777 7 22 5 222222 333 7 7 3 000 33333 7 55 22222222 22 0000 7 7 77 0 0 0 0 22 00 7 7 7 22 7 7777777 22 7 777 3333 0 7 7 7 8888 7 7 7 0 7 4 4 9999999 11111 444 33333 99 7 7 99 3 11 666666 99 111 3 9999 4 7 444 0 7 000 4 44 0 0 888888 55555555555 2 0 4 0 11 0 99 0 888 888 444444 99999 0 888 7 333333333333 7 7 11111111111 7 000 66666666666 66666 7 66 7 999999 33333 4444444444444 1111 7 7 0 0 00 0 0 77 7 7 7 99 99 0 7 7 7 444 0
consensus : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GG-GTTT-GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT----G--GC--AGTG-TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-T--N-----TT-T----TTAA-TG-GC--GT----TGT--C-T-T-GGTG-CTGAAT-ATTACGGACTAGCA-TTTA--CGTTATATAAT-GC-C-AG-AAGAACGAC-T-C--------TGTTGAAG-AAA----AGGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACG---CATAAC-CTGGACTAGAGGAC-AAA-GCTTGG-TG-T-AATGGGAA---CACA-GCGGAGCCGATGAT-A--CT--ATTCT-C-GTC-TAG-ACCTTCATCCA-GGA-TATCCCATGCGGGGGAAC--TCAGCCCTACCTCA-CAGCTTT-CA-CG-CTTGACTT-CACAGGC-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GT-TCC---C-CGAATCCA-TA-C-TAATAA-CCGATTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAN-CATAGAC--ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAGA--T---CGGT--C-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAACCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ANTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACT---A-----TCTG-TTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAGTTTTT-ACATTTACACTG-TNTTGATG-TG-GTCTGTGTT-ATTTCCTGC-GGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTCTT-GCGCTTGCATGCATG--CA---TATGAT--GGTGTTTTNTAT-TGACACTGACAGTAACTGTC-ACTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTTGCCATTATGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTTGCGCTCC-TAAGCCA-TCA-CA-T------N-TAT-CA-GAATCATTCACACAATGCG-TTA-AGACA-TCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TTAATGT-TGTGTATTT-TT--C-TG--TTAGTGAGT--GGATTCATGT-A-CG-GT-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACCT-ACTTTCAGTGGCCACAAAA-TTGGG-TC-T-C-ACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGCT-ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTNCGACCACTTA---------------CACT-----ATTCAGTTCCAAAGCCACAACATATTCATGGNAAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CCGCCT-----AG---CGG---CGTACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCA-AATACAGTGG-CTNTTCAAGC-CTTTCTCTTA-ACATAT--CACACTGGATTATT-AC-A-TAT-A-TT-ATTG-CCATATT-TTATTCATACAAG-GATACAAATA--------ATC--CAGTTAAGCC---TACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGC-ACTATAC-TGTCGG--TACCTNGCAT-G-TCAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-ACCTG---GG-GG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-C--CTGT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGTCG--GCTTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTTAA-T--GC--ATTGG--NGCAGC----TACTACCCTTG-C-A-CAGCAAGGCA-TTGC--AAAT-AAGTTATTCAAGCG-CCAG-G-TCAATG---GAGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AA-TATTA------------CA-TTCA-TAA-----------GCCTT-GCG---TA-----T-----TTAT-T--T-ATAGCANA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-CACA-G-CAA-GGG--GCTGCCAGATC-CA-GGACAG---GGGGACCAGACCTNATTAA
Reference ( family-719 ) : CGCATATT-CTAG-C-TTGTCTAGCA-TACG--C--G-C-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GG-GTTT-GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT----G--G---AGTG-TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-T--A-----TT-T----TTAA-TG-GC--GT----TGT--C-T-T-GGTG-CTGAAT-ATTACGGACTAGCA-TTTA--CGTTATATAAT-GC-C-AG-AAGAACGAC-T-C--------TGTTGAAG-AAA----AGGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACG--CCATAAC-CTGGACTAGAGGAC-AAA-GCTTGG-TG-TTAATGGGAA---CACA-GCGGAGCCGATGAT-A--CT--ANTCT-C-GTC-TAG-ACCTTCGTCCA-GGA-TATCCCATGTGGGGGAAC--TCAGCCCNACCTCA-CAGCTTT-CA-CG-CTCGACNT-CACAGGC-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GN-TCC---C-CGAATCCA-TA-C-TAATAA-CCAACTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ACC-CG--T----TCATAAC-CGTGTCCA-TTCTA-T-CATAG-C--ATATTAGT-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAG---T---C--T--C-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCAC----A--------ACAAACCA-T---AGC-ATT--AGCCCTGGA-CGGATGC--ATTTCATA-TATTA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATAGACAACTCAA-TTTA-ATCTCA--ANTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCGAGCACT---A-----TTTG-TTACATTTGG-CAACAC-GCACCTTAGGGGCTTTGTTTTTTTTTTTAACTACAATGGGTCT-GCTATAGATTCG-TGT-AGGTATTTCATCC-ACCT--GTC-AATCTACC--------------GTGGAAA-TGGGGTCAAGGGGGGGGGTGTGGGGGGGGGGAACCCAAACAACACA-CAA--ATTCAACTTT-GGGCAG---GGGGGTTCATAACGTAGG-TACATAAATCAATTTCATTTTGGTT-AGTGCTG-TAAACCCTGCTGATTCTAAACTTCCAATTTAAATNNATGTAACAGTTTTTNACATTTACACTGCTCTTGATGNTG-GTCTGTGTTTATTTCCCGCAGGCTATGATTCTGAATTAACTTT-CTGCCCCT-AATGATTCTTTGTGCTTGCANGCATGACTATNTTATGATTTGGTATTTTNTATATGACACTGACAGTAACTGTTCACTGTTACATTTTGGTTGTGCTATTTCATGCCATNAATTTTTAAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGA-AT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACGT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTTGCCATTATGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTTGTGCTCC-TAAGCCA-TCA-CA-T------C-TAT-CA-GAATCATTCACACAATGCG-TTA-AGACA-TCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TTAATGT-TGTGTATTT-TT--C-TG--TTAGTGAGT--G-ATTCGTGT-A-CG-GT-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACCTGACTTTCAGTGGCCACAAAA-TTGGG-TC-T-C-ACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGCT-NTTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTNTGACCACTTATCATTGTGTCT-T-ACACTCAAATATTCAGTTCCAAAGCCACAACATATCCATGGNAAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CCGCCT-----AG---CGG---C-TACAG--CAGAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AA-GCATAATACAGTGG-CTNTTCAGGCACTTTCTCTTA-ACATAT--CACACTGGATTATT-AC-A-TAT-A-TT-ATTG-CCATATT-TTATTCATACAAG-GATACAANNA--------ATC--CAGTTAAGCNA--TACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGC-ACTATAC-TGTCGG--TACCTNGCAT-G-TCAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-ACCTG---GG-GGNTTNGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-C--CTGT-CC-CTTAC-TAGTTGCCGGCTTACTTCAGTACTG-CC-C--GGTTG--GCTTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTTAA-T--GC--ATTGG--NGCAGC----TACTACCCTTG-C-A-CAGCAAGGCA-TTGC--AAAT-AAGTTATTCAAGCG-CCAG-G-TCAATG---GAGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AA-TATTA------------CA-TTCA-TAA-----------GCTTT-GCG---TA-----T-----TTA-----T-ATAGCNNA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGANCCTCCATTAAAAANAG-NACA-G-CAA-GGG--GCTGCCAGATC-CA-GGACAA---GGGGACCAGACCTAATTAA
gi|1 : CGCATATT--TAG-C-TTGTCTAGCAATATG--CCCG-CCATT--AATAT-CTCCGGA---------ACTT---GTTCTCAT--GTCCTT-GTTG-TT-A--TT-ATGAA-AAAGG-GGG--GA-GTTTTATGTGTGGCCCATTCT--AT-TATTCCGCG--AA--AGTTGTCATT-CCG-C-ATTG-TTCGA----AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGGCCTAAT-AC-G-T-CAC---GAA-TCATGTGCTCGAA--ATTCTGC-AA-GCC-A-TGT----G--GCCCAGTG-TACAATTAC-G--GCCAGGGAAAACTCTGTAATGTCCTTTGC-A-TCAACTTGAAA-ATCTGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-T--------TT-T----TTAA-TG-GC--GT----TGT--C-C-T-GGTG-CTGAATTATTACG-ACTAGC--TTTA--CGTTATATAAT-GC-CCAG-AAGAACGAC-T-C--------TGTTGAAA-GAA------GGGGAAGGGCGTTC-AC-G-C-T-CTAA---ACAGTCTCCC-ACG--CCACAAC-CTGGACAAGAGGAC-AAA-GCTTGG-TGCTTAATGCGAAACACACA-GCGGAACCGATGAT----CT--ATTCT-C-ATC-TAG-ACCTTCATCCA-GGA-TATCCCATGCGGGCGGAC--TCAGCCCTACCTCAACAGCTTTTCA-CA-CTTGACTTTCACAGGC-TGGCGC-ATCGCA-TC-CCG-T-AGTTGAA-GCGTCC---G-CAAATCCA-TA-C-TAATAA-CCAATTCTTCGCGTAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCACAAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---GATGCATCA-ATTC-A-ATATGGCCC-CA--TGTTGCGCATTATT-CG--TGAATTCATAAC-CATGTTCA-TTCTA-T-CATAG-CCCACATTAGCCTACGTTGCCTGGTTTTGCCTG-ACATA-TA-TGCTCAGATAC---CG-T--C-AATTCACTCGC-GCCTGACAA-A--TTTA-CCAAATAG-GTTCAGCATAACTTAAAACAACCACTGAAA--------ACAAACCA-TCTTAGCCATTT-AGCCCTGGA-CGGATGCCCATTTCATAATACTA--TCTTACAT-GCATATAGGTTTGC-TGCTCAATTCATAGACAAATCAACTTTACATCTCA--AATAC-TTAAAG---GGC-G--GGGGGGGAGGGGATGCAGAAAAAGTCACAGGG-CT--TC--A--TTA-TGGCTAGCACT---A-----TCTG-TAACATTTGG-CAACACAGCACCTTAAGGCATTTGCTTTTTTTTT-AACTACAATGGGTCTTGCTATA-ATTCGCTGTGAGGTAT--CATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGAGGTCAAGCAGG------TGGGCCG------CCCAA-CAACACAACAATTATAAAACTTTTGGGCAGCGGGGGGATTCATAACGTAGGGTACATGAATCAATTTC-TCCTGGTTTAGTGCTGGTTAACCCTGCTGATTCTAAACTTCCA-TTTAAA-ACATGTAACAGTTTTTATCATTGACACTGGTATTGATGTTGCGTTTGTGTT-ATTTT--GC-GACT----TTCTGAATTAACTTTTCTGCCCCCCAATGATTCTTGGC-CTTACATGTATG--CA----ATG----GGT-TTTTA-AT-TGACACTGACAGTAACTGTCAACTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATGCTT--TATCA-TTTTCGCGGTTGGC-TAGTCATGGCCCAAATCACTGATTGACAT-GTTTCATTACT-TGGGCCGATTTTTAAATTCGC-AGCCA-T-GTGGATAGCCAGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAAAT-GTGGG-TGGTG-ATGC-TAGATCTTTCAA-CCA--TG-AC--ATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCCATCA-TTT--AGA-TTGACACTAATCAATATTTTGCCAGTATGATAAAACCTTTGCCGGAAGGAATTTTTAGA-----GTC--AAGGAAC--TTC----GA-TCT-GATCTTCAGAGCCTGGTGGGCAAGCCACTAAATGTTTTTTA-CAAAG-C-AT-TTCT--GCA-GC-GGG-GCGCTTCAGTTCGATTGATTTTA-GACATACACGGTTGCGCTCCATAAGCCA-TCA-AA-T--------TAT-CA-GAATCATTCACACAA-GCG-TTA-AGA-A-TCAATACCATA-ATCAAGTTTTTAAGAAGGCGGC-TTAATGT-TGTGTATTT-TT--C-TGCTTTAGTGAGT--G-ATTCATAT-ACCG-GT-GCTGGTGGATTTAGC-TTACT-GGTTGC-GAGCTGTTATTTT-CATGCCCGTCAATG--GACCTAACTTTCAGT-GCCACAAAA-TTGGG-TC-T-C-ATTTTCAATCTTAAAACACC-TC-A----ATACAT-TCTTTAGAACTTGCCGA-CC-CATTGCT-GC-AGC--ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATATTTTCA-GTGTGCCGAATATGGCCTTAGTACACATT-TT-AACA----GATCAT-CTAACTCACATCGCG-TTATGCT-GT-CTGTTGCGACCAC----------------------------TTCAGTTCCAAAGCCACAACATATTCATGGGAAAAC-AAT-A--T-CACTG---TTTCTATAGCTTA-CAAC-CAGTGGCGCTC----TCCTTCAG-CCAGCTGG-CCGCCT-----AGCCCCAG---CGTACAGC-CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AG-C-TCATTCAGA-GCGCAGCTTTTTTTCAT--GTGTAATAGGAC----TATTACTATTC-TCAC---GTA-AGCAT-ACACCAAATCAG-GC--AATACAGTGGCCTTTTCAAG--CCTTCTCTTACACATAT--CACACTGGATTATT-AC-A-TAT-A-TT--TTGCCCATATT-TTATTCATACAAGCGATACAATAA--------ATT--CAGTTAAGCCCCTTACATTTTCTGCGATTAGTTTTTCAT-GGAAGACAG-TCAATTAGGAATCGGC-ACTATACGCGTCGGGCTACC-AGCAG-G-TCAGGTAATAACC--TCCAC-TA-------CA-GC--CAGTTACAATT-ACCTG---GG-GGTTTTGATCACATGAAGA-GGGCAACATATTTTGTCACTTC-CATCG-C--CTGTCCC-CTTAC-TAGTTGCCAGCTTACTTCGGTACTGCCC-C--GGTTAGCGCTTAA-TTAGGT-GGATAG-ACTGTTCAGGCCATTTC-AA--TCCCACTCTTTAA-T--GCCAATTGG--GGCAGC----TACTACCCTTG-CTA-CAGCAACGCA-TTGCTTAAAT-AAGTTATTCAAGCG-CCAGCG-TCAATGGCCGAAATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AA-TATTA------------CA-TTCA-TAA-----------GCTTTCGCG---TA-----T-----TTA-----T-ATAGCCAA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGT--TC-GGAGCCTCCATTAAAAACAGCCACA-G-CAATGCG--GCTGCCAGATC-CA-GGACAAGGGGGGGACCAGACCTCATTAA
gi|10 : GAGGAC-AAA--CTAGG-TG-T-AATGGGA----CACA-GCGGAGC-GATGGT-A--CT--AATCT-C-A-C-TAG-ACACTCGTCCA-GTA-CAGTCCATG--GGGGA-------GTCCAGCGT-A-CAGCT---CA--G-CTCAACTC-CAGAG-C-TGG-----T-GCA-GC-CCG-T-GCTTGAA----TCCGTCC-CTAATAGC-TA---TAATAA-CCAACTCT---CGGAGCCGAGTACA----ATA-------------------------------------TGCA-AAATAATTATA--TTTTTCAGGGCC--CACAAC-CA-ATACACA-T---AATG-ATCA-ATTCTA-ATCTGGTCC-CA--T--TG-GCAT-ATCATG--T----TGATAAC-CATGTCCA-TTCTAAG-CATAAAT--ATATTAGT-TACATTGC-TGGTT---CGTG-ACATA-CA--G-TCAG---T---CGGT--C-A----------------ACAA-AAGTTGG-CCAAAT-T-GTT--GCATAACTTAAA-CA------------------------C--T---AGC-ATTG-AACTCTGGA-TGGATGT--ATTTCATA-TATCA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATAGACAACTCAA---TA-ATCTTA--ATTATAT-AAAATTCGAC-T--GGGGGA---------CAGAAAA-TTCACAGGG-TTGGTCAAA--TTA-TGGCGAGCACT---AAGTCTTTTGTTTACATTTGG-CAAC
gi|11 : CGCATATT-CTAGCC-TTGTCTAGCA--ATG--C--G-C-ATTTAT-CCT-CTCCGGGTTTTATTTTACTCGGAATTCTCA-T-ATCC-TTGTTG-TT-A--TT-ATGAACAAAGG-GGGGTGG-GGTT-GT-TGTTGCCCATTC---AT-TATTCCG-G--AA--AGTT-TCATT-CCG-CAATGG-TTCGA-TAGATTGTG-TT-A-ACATTTTACTTAG---TC--TTTT-------ATG--TGATAACGG-T-CACAGGAAA-TCATTTCCTCGAC--ATGCTCCGAA-GCC-ATTGT----GCTG----GT--TACAATTAC-GT-ACCAGGGAAAACCCTGTAATGTC-TTTGC-A-TAAACTTGAAA-AT-TGTTG--ATAATT-T--TAC-C-C--TG-GA-TT-AACTT--G-----TT-T----TTAA-TG-GCT-GT----TGC--C-T-TGGGTG-CTGA---ATTA-GGACT-GCA-TTTA--CGTTAT-TAAT-GC-A-AG-A--GACGAC-T-C--------TGTTGAAG-AAA----AGGGGTGGGGGCGTTCCAC-G-C-TCCTAA---ACAATCTCCC--CG---CATAAC-CTGGACTAGAGGAC-AAA-ACGTGGTTG-T--AT-GGAA---CACA-GCGG-GACGATGAT-AACTT--TTTCTCC-GTC-TAG-A-CTTCAT
gi|12 : ttatT--AATCT-C--TC-TAA-ACCTTCGTCCA-GTA-TATCCCATG--GAGGAAC--CCAGCCC-ACCGCT-AAGCT---CAACA-CT-AACAC-CACAG-C-TGG-----T-GAA-GC-CCG-T-GCTTGAA----------------TCCG-TA-CCTAATAA-CCAACTTT---CGTAGCCGAGTACAGGTAATGCACTGTTCGTTATCTTTGCCTTCA-CAC-AACAACG-TGCA-AAATGATTATA--TTTCTCAGGGCC--CACAAA-CA-TTACACG-T---AATA-ATCA-ATTC-AGATATCGCCC-CA--T--TG-GCAT-A------------------------TCCA-TTCTAAG-CATAAAT--ATATTAGC-TACATTGC-TGATT---CGTG-ACATAGTAATGCTCAG---TTAGC--TTCC-A-TTCACTCG--G---T-CAACA--TTTGGCCAAAT-T-GTT--GCATAACTCAAA-CAATCA-----A--------ACAAAAC--------C-ACT--A----T-------ATGC--ATTTCATA-TATTA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATTGACAACTCAA---CA-ATTTAA--AG----T-AAAGTTCGACTGGTGGGGGG---------CAGAAAT-GTCACAGGGTTT-GTC--AACTTA-TGGCGAGCACTTCCA-----T----TTACATTTGG-CAAC
gi|13 : G--TACCT-GCATTG-TCAGGT-ATAACC--TCCAC-TAGGCACTACAGGC--CAGTTGCAATT-ACATGCATGGTGGGTTGAATCACATGAAGAGGGGCAAT-TATTTTGTCACTTC-CA-CG-CCTCTGT-CCATTTAC-TAGTTGCCAGTCTAC-TCAGTACTG-CC-CCGGGTTG--G-TTAATTTAGGTGGGATAG-CCTGT--AGA-CATTCA-AA--TCCCA-TCTCT-------C--ATTGGT-TGCAGCT---TACT-CCCTTATC-AGCAGCAAGGCATTTGG--TAAT-AAGTTATTC-AGCGCCCAG-GTTCAATG---AGGATCGGTC-----------GCGAATCGTC-TAT-A-TAT-C--C-CCC---AG---AT------TGT---T-ATTATTT---AATTATTA------------TATTTCA-TAA-----------GGCTT-GCG---TATTTATT-----TTA-----T-ATAGCATA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGTTGTC-GG-GCCTCCATTAAAAACAG-CACATG-CAA-GGGCAGC--CCAGATCTCA-GGACAAC--GGGGACCAGACTT
gi|14 : TTA--CGTTATTTAAT-GC---AG-AA--ACGAC-T-C--------TGTTGAAG-AAA----AGGGGGAGGGGCGTT-CACGG-C-T-CTAA---TCAGTCT-CC-ACG---CATAAC-CTGGACTAGAGGAC-AAT-ACGTGG-TG-T--AT-AGAA---CACAGGCG--GCCGATGAA-A--CTTAATTCT-CTGTCGTAGAACCTTCAT-TA-GGA-TATCCCA-ATGGGGGGAA--TCAG--CTACCTCA-CAGCTTTACA-AG-CTTGACGT-CACA-GC-GGGCGCAAT-GCACTC-CCG-TGGCTT-AA-GG-TCC---CTCAAATTCATTA-CTTAATA---CGATTCT---CGGAGCCGAGTACAGGTAATA----------TAT-------TTCG-CACAAAC---G-TGCA-AAATAATTATACTTTTCTCGGGACCCGCACAAA-CATTTGCACA-TTTGAATG-ATCATATTC-A-ATATGttctt
gi|15 : ATATT-TAAG-C-G-GTCTAGCA-T-TG--C--G-C--TT--C-TAT-CTCAGGG----------CT----GTTATTGT--GTTCTTTGTTG-TT-AATTT-ATGAA-AGAGGAGGG--GG-GGGT-GT---TTGCCCATTTTAAATGTATTCGG-T--AA--AATG-TCATT-CCATC-GGGG-TT-GATT--AT--TG-TT-T-AC---TGAGTTTG---TC--TGATGGAGGACGGG---AAT-AC-GTT-CAC---GAA-TCATTTCTTAGAA--AATCTG---G-GAC-A-TCT----GT-G---AG------GATTACAGT-G---GCGGAATCGTTGTAATGTA--TTGT-AGTC----TG-AA-AT-TGTTT--A----T-A--TGTCC-T--TGTGA-TTAAAC-TAAA-----TG-C----TTTA-TG-GC--TT----TATTGC-TAT-GGTG-----------AC-GAC-AGAT-TTTATTCGT--TATGAT-G--C-AGTAAGATCGACGTGC--------TGTT-ATG-AAA----GGGGGGG
gi|16 : tatgcaTACTTCCGTACTG-CCAC--GGTCG---CTTAATTTAGCTGGGATAG-ACAGT--AGG-TATTTC-AAAGTCC-ACTCTTTAG----GC--ATTGG--CACAGC----TACTACTCTTA-C-A-CAGCAAAGCA-TTGC--AAATCAAGTTATTCAAGCG-GCAG-G-TCAATG---AA-ATTGGTC-----------GCGTATCAGT-TAT-AC-AT-T--TGCTA---AG---AT------TGT---T-ATTA-TT---AA-TA--A------------CA-TTCA-TAAGCCATTGATACGCCTT-GTG---TA-----TTTATATTA-----T-ATGGCATACCAT---A--CATTT-----AT-------------TAAGT----TTTT-CATA-GGTCAAATTAAT-ATCTGGGTTGTC-AGATCCTCCATTATAAAGAG-GACA-G-C-A-GGG--CCTGCCAGATC-CA-GGACAG---GGGGACCAAACCT
gi|17 : gtgCGCATATTTCTAG-C-TTGTCTAGCA-GATG--C--G-C-ATT--T--AT-CTCCGGA---------ACG----GT-CGCATT-GTCCTTTGTTGGTT-A--TT-ATGAA-AA----GGG--GG-GTTT-GT-TGTTGCCATTTCT--AT-TATTCCG-G--AATGGGGT-TCATTTCCG-C-ATGGATTCGA-T--AT--TG-TT-T-AAATTT-ACTTAG---TC--GTTT-------GGG---AAT-AC-G-T-CAC---GAA-TCATTTC-TCGAACAATTCTGC-AAAGCCGA-TGTT---G--GC--AGTGGTACA-TTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAATGT-TGATG--A----T-TG-TA--C-C--TGCGA-TT-AAC-T--T-----TTGT----TTAA-TG-GC--GT----TGT--C-C-T--TTGCCTGAAT-A-TACGGACTAt
gi|18 : tatCGCATATT-CTAG-C-T-GTCTAGCA-TATG--C--G-C-ATT--T-ATT-CTCCGGA---------ACG----GT-CTCATT-GTC-TTTGTTG-TTTA--TT-ATGAA-AAAGG-GGG--G----TT-GT-TGTTGCC-ATTCT--AT-ATTTCCG-G--AA--TGTT-CCATT-CCG-G-CTGG-TTCGAAT--AT--TG-TTTA-ACATTT-ACTTAG---TCCTTTTT------CGGG--TAAT-ACCG-T-CAC---GAAATCATTTTCTCGAA--ATTCTGC-AA-GCC---TGT----G--GC--AGTG-T-CAATTGC-GT-GCCAGGGAAA-CCCTGTAA-GTC-TTTGC-A-TCAACTTGAAA-AT-TGTTGATA----T-T--TA--C-C--T--GA-TT-AAC-T--T-----TG-T----TTAA-TGCGC--GT----TGTTCC-T-T-GGTG-CTGAAT-ATTACGGACTA
gi|19 : tatCAG-GATCAATG---GA-ATCGGTTCAGTTCTCTAAGCGAATCGGCCTATTAATAT-CTAC-CCGTAGAG---ATAATGGGTGTATAT-ATTC-TCTACAA-TTTTATTCTATAACGACCC-TTCA-TAA-----------GCTTT-GCGTATTA-----T-----TTA-----TGATAGATGA-CATTACAT-CATTCTTCCAATTTCACCACCTTAATAAGTATACTTTTGCACAGGGTCAAATTAATAATa
gi|2 : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--GAC-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AGAGG-GGG--GGAG----GC-TGTTGCCCATTTT--AT-TATTCCG-GATAA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG---------TTTTACTGAG---TC--TTTTTCTGTGCGGG---AAT-AC-G-T-CAC---GAA-TCATTT-CTAGAA--AATCTGG-AA-G-C-A-TGTTGCAG--G---AAT--TACAATTGC-GT-GCCA-GGAAAACCCTGTAATGTC-TTTGT-G-TCAACTTGAAA-AT-TGTTAT-A----TGT--TA--C-CTTTG-GATTT-AAC-T--AACATGCT-T----TT-A-TG-GCTTTT----TGT--CAT-T-GGTG-CTGAAT-ATTACGGACTAGCATTTTA--CGTTAT-CAATGGC-C-AG-AAG-ACGAC-T-C--------TTGTGAAG-AAAAGGTAGGGGGGGGGGCGTTCCAC-A-CTT-CGAAT--ACAGTCTCCCAACG---CACAACACTGGACTAGAGGAC-AAACGTTTGG-TG--TAATTGGAA---CACA-GCGGA-CCGATGATGA--CT--ATTCT-C--TC-TAG-ACCTTTATCTACAGA-TATCCCATG-GGAGGAAC--TCGGCCTAACCTCA-CAGCTTA-C--CGTCTTGACTT-CACA-GC-T-GCGC-AT-GCA-TTACCGAT-GCTTGAAGGT-TCC---T-CGAATCCA-TAGC-TAATAACCCAATTCT---CGGAG-CGAGTACAGGT-TTAC---------TTA-------TTCGACAC-AAC---GTTGCA-ATA-AAATATA---TTCTCGGGGCC--CACAAACCA-TTGCACATT---GATG-A-CA-ATTC-A-ATATGGCCCACATGT--TG-GCAT---T-CGGTT----TCATAACTTGTGTTCATTTCTA-TGCATAG-C--ACATTAGC-TTTGTTGC-TGGTT---TGTGCCCATA-TA-TGCTCAGA--T---CCGT--CAA-TTCACTCGGTG---GACAA-A--TTTA-CCAAAT-TGGTT--GCATAACTTAAA-CAACCA-----ATCTTGAATACAAACCACT---AGC-ATTTAAGCCCTGGACCGGATGC--ATTTCATA-TACTATCT-TTACCATGCATATAGGTT-GCATGCTCA-T--------------A-TTTACATCTCAACATTACTT-AAAG-GCG---G--GGGGGG---------CATAAAA-GTCACAG------GTC--A--TTATTGGCTAGCACT---------TCTG-TTACATTTGGCCAACAC-GCACCTTAGGGGCTTTGTTTTTTTTTTTAACTACAATGGGTCT-GCTATAGATTCG-TGT-AGGTATTTCATCC-ACCT--GTC-AATCTACC--------------GTGGAAA-TGGGGTCAAGGGGGGGGGTGTGGGGGGGGGGAACCCAAACAACACA-CAA--ATTCAACTTT-GGGCAG---GGGGGTTCATAACGTAGG-TACATAAATCAATTTCATTTTGGTT-AGTGCTG-TAAACCCTGCTGATTCTAAACTTCC-ATTTAAAT-AATGTAACAGTTTTTTACATTTACACTGCTTTTGATGGTG-GTCTGTGTTTATTTCCT---GGCTATGATTCTGAATTAAC--T-CTG--CCT-AATGATTCTTTGTGCTTG---GCATGACTATCTTATGATTTGGTATTTTGTAT-TGACACTGACAGTAACTGTTCACTGTT-CATTTTG--TGTGCTA-TTCATG-CATAAA--TTTGAATG-TT--TATCA-TTTTCG-GGT-GGCTTAGTCATGGCAT-AATCACTGATTGA-AT-GTTTCATTA-T-TGGGC-AATT----------------A-T-GTG-----------------ATCTTC-TTATGCAT-AC-TTTCA-GACTAATGTAATT-GTGGG-TGGTG-AT-G-TAGATCTTTCAA-CCATTTG-AC-AATCTGTTCAT-----TC--CTACACAT-CTA--G-ATACA-TATCC-TCATTTT--ACATTTGACACTAATCAATA-TTTGC--TTAT--TGATACCTT----GG--GAA---TTTAGG-----GTC--AAGGAACT-TTCT---GA-TCTGGATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-CTAG-TTCT-GGCAGGC-GGGTGCG-TTCATTTCG-TAGATGTTACAACAT-CACGGTTG---TCC-T-AGCCACTCA-CA-CTATTAAT-TAT-CA-GAATCATTCACACAATGCGTTTA-AGACA-TCAATACC-TACGTCAAG-TTTTAAGAAGGCGGCTTTAATGT-TGTGTATTTCTT--CTTG--TTAGTGAGTTGG-ATTCATG--A-CGCGTCGCTGGTGGATTTAGCTTTA---GGTGGC-GAG-TGTTACTTT-CA
gi|20 : atatAAT-GC-C-GG-AG--ACGAAAT-C--------TGTTGAAGAAAA----AGGGGGGAGGGCAAT-CAC-G-C-T-AAAAAGCACAGTCTCCC-ACGCACCATA---------TCGAAGAC-AAA--CTAGG-TG-T--GTTGGGA---CACA-GCGGAG-CGATGGC-A--CT--AATCT-C--TC-Tt
gi|21 : aagTTGTC-AGATCCTCCATTATAAAGAG-GACA-GTCAA-AGG--G-TGCCA-ATC-CA-G--CAGC--GGGGACCAGACTTAAT
gi|3 : ATTCTAAACTTCCAATTTAAATACATGTAACAGTTTT--A-ATTTACACT--TCTTGATG-TG-GT----GTT-ATTTCCTGCAG------ATTCTGAAT-AACTT--CTGCC----AATGATTCTT-G-GCTTGCATACATG-------TATGAT--GG-GTTTTTTATATGACACTG------------------TACATTTTGGTTGTGCTATTTCATGC-ATCAATTTTGAAATG-TT---ATCA-TTTTCG-GGT-GGC-TAGTCATG---CAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTT-AATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-T-ATGCAT-ACATTTCA-GACTAATGTAATT--TGGG-TGGTG-ATG--TAGATCTTTCAA-CCA--TG-ACCATACTGTTCATT----CC--CTACACAT-CTA--GCATA-AT-ATCC-TCA-TTT--TAA-T-GACACTAATCAATA-TT-GC-ATTATGATA---CCTT----GG--GAAATTT--AGG-------C--AAGGAAC--T-CT---GA-TCT-GATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-ATATTCTGG-CA--C-GGG-GCG-TTCATT-CG-TG----TTACAACAT-CACGGTTG-G-TCC-TAAGCCA-TCA-CA-C------A-TAT-CA-GAATCAT---CACAATGCG-TTA-AGACA-TCAATAC--TA-GTCAAGTTTT-AAGAAGG-GGC-TTAATGT-TGTGATTTT-TT--C-TG--TTAGTGAGT--GGATTCATGTTA-CG-GT-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-TCAG---GTCAATG--GACT--ACTTTCAGTGGCCACAAAA-TTGGG-TC-TTC-ACTTTCA---TTTAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T--CTAGCT-ATATT----------CTCTA-----GGG-GTTGTAGGAGGC------------ATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTGGTACACATT-TTTAACA----G-TCATACT------CATCGG--TTATGTG-GT-CTGTTG-GACCACTT----------------------------CAGTTC-AAAGC-ACAACATATTCATGG-AAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-C--CCT-----AG---CAG---CGTACAG--CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCA-TCAGA-G-GCAGC--TTTTTCAT--GTGTAATA-GAC-----ATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCA-AATACAGTGG-CTTTTCA--C-CTTTCTCTTA-ACATAT--CACACTGGG-TA-T-AC-A-TATAA-TT-ATTG--CATA-T-TTATTCATACAAG-GATACAA-TA--------ATC--CAGTTAAGC----TACA-TTTCTGCTATTAG-TTTTCAT--GAAGACAGTTCAATTAGGAATCGGCAACTATAC-TGTCGG--TACCTTGCAT-GTTCAGGT-ATAACC--TCCACATA-------CAGGC--CAGTTAC-ATT-ACCTG---GG----TTTGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG----CTGT-CC-CTTAC-TAGTTGCC-GCTTACTTCAGTACTG--C-C--GGTTG--GTTTAATTTAGG-GGGATAGTAC-GT--AGG-CATTCC-AA-----CA-TC-TTAA-T--GC--ATTTG--GGCAGCTACATACTACCCTTG-C-A-CAGCAAGGCA-TTGC--TAAT-AAGTTATTCAAGCG-CCAG-G-TCAATG---G-GATCGGTC-----------G-GAATCGGC-TAT-A-TAT-C--C-CCA---AG---AT------TG----T-ATTATTT---AA-TATTA------------CA-TTCA-TAA-----------GCTTT-GCG---TA-----T-----TTATTT--T-ATAGCATA-CAT---A--CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC--GAGCCTCCATTAAAAACAG-CACA-G-CAA--GG--GCTGCCAGATC-CA-GGACAA---GGGGACCAGACCTCATTAA
gi|4 : TAAATG-TTATCATCAATTTTAG-AGT-GGT-T-GTCATTGCA-AAATCAGTGATTGA-ATCGTTTCATTA-CATAGGC-GATTTC-ATTTTTGC-AGACAGT-ATGTATATC-AGCCATTGTGATCT----TATGCAT-ACATTTCA-GTCTA-TGTCATT-GTGTG-TTGAG-ATGGGTATACCTTTGAA-CCA--TG-ACAAATCTGTTTAA-----CCTGCTACATGT-TTA------ACATT-TCT-TCG-TTTGGAGA-TTGACACTAATCAATA-TT---CAT-ATGAGAATACCTT----GG--GAAATTT---AG-----GTC--AAGGAAC--TTCT---GAATCT-GATCTTCAGTGCCTGGTGGGCAAG---ATAAATGTTTTTAG-CAAAGCC-AT-TTCT-GGCA-GC-AGG-GCG-TTCAGTT-G-TAGATTTTACAACGC-CAGGATTGGACT---TAAGCCA-TCA-CA-T------CATAT-CA-GAATCATTTACATAATGCG-TTA-AGACA-TAAATA-CATG-GTTAAGGTTTT-AGAAGG-GAT-TTa
gi|4 : TTCACGG-A-CA-GT-GCTGTTTGATATAGC-CTA---GGTTGC-TCG-TGTTATTTT-AAAG---GTCAATG--GGCCT-AGTTTCAGTGGCCACAAAA-TGGGG-TC-T-TTACTT-CAATCTTAAAG-ACA-TT-A----TTACGT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGCT-GTT-T----------CAGTA----TGGG-GTTGTAGAAGGC-----------AA-AACATAA--C-ATATA-TTTCATGTGTGC--AATATGACATTCTTA-ACA------AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-ATGTTA-GACCACTTATCATTGTGTCT-TTACACTCAAATATTCAGTTC-AAAGC-ACAACATATCCCTGACAAAACGAATAAATT-C-CTG---ATTCTACATCTTG-CAAA-CAGTAG-A-TT----TTGTTCAG-GCAGCTGG-T-GCCT-----AG---CGG---CCTACAG--CAGACCAT-AAC---CCT-CAGC---TTA-TCC-T----AGCT-TCATTCAGG-G-GCAGCTATTT--CAA--GTGT--TA-CAT----T-TTA----TCGT--T---GTA-AGGAA-ACACCAAAG-AA-GCATA-TACAGTGG-CTATTCAGGTA-TTTCCCCTA-ACACAT--GACACTGGAT-ATT-AC-AATAC-A-TTTATTG-C-ATATT-T-ATTCATACATG-GATACGAGTA--------ATC--CAGCTAAAACA--TACA-TTTCTGCAATTAG-TTTTCAT-TGAATACATATCTATTAGGAATCGGC-ACCATAC-TGTCGG--TACTAAGCAT-G-TTAGGA-ATAATTTGTCCAG-TT-------CAGGC--CAGGGATAATT-ACATG---GG-GGGTTCGATCACAGAAAGCGGGATAAC-TATTTTGTCACTTCTCA-GT-T--CCG--CT-CTTAA-TCGTTGCCAGTTTATTCCCGTACTG-TCAC--GGTC---GCTTAGTTTAGCTGGGATAA-ACAGT--AGG-TATTTCAAA--TCCCACTCTTT-A-T--GC--ATTGG--CGCAGC----TACTACGCTTG-C-A-CAGTAAGGCA-TGGA--AAATCAAGTTATTCAAACG-GTAA-G-TCGAT----GAGATCGGTC-----------GCGAATCAGT-TTT-AC-AT-C--CGTTA---AG---AT------TGT---T-AT-----------TATTA------------CA-TTTA-TAA-----------ACCTT-GTG---TA-----T-----TTATATTGT-ATAGCAAA-CGT---AA-CGTTC-----AT-------------TAAAT----TTTT-CACA-GGTAAAATTCAT-ATCTGGGTTGTC-AGATCCTCCATCAAAAAGAG-AACA-G-CTA--GG--GCTGCAATATC-CA-GGACAG---GGAGACCAGACCttattggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaaccccctgcaactgttcacggacagtgctgtttgatatagcctaggttgctcgtgttattttaaaggtcaatgggcctagtttcagtggccacaaaatggggtctttacttcaatcttaaagacattattacgtttttagaacttgtacccattgtgctagctgtttcagtatggggttgtagaaggcaaaacataacatatatttcatgtgtgcaatatgacattcttaacaaacagtcatctaaatcacatcgggttatgtggtatgttagaccacttatcattgtgtctttacactcaaatattcagttcaaagcacaacatatccctgacaaaacgaataaattcctgattctacatcttgcaaacagtagattttgttcaggcagctggtgcctagcggcctacagcagaccataaccctcagcttatcctagcttcattcaggggcagctatttcaagtgttacattttatcgttgtaaggaaacaccaaagaagcatatacagtggctattcaggtatttcccctaacacatgacactggatattacaatacatttattgcatatttattcatacatggatacgagtaatccagctaaaacatacatttctgcaattagttttcattgaatacatatctattaggaatcggcaccatactgtcggtactaagcatgttaggaataatttgtccagttcaggccagggataattacatggggggttcgatcacagaaagcgggataactattttgtcacttctcagttccgctcttaatcgttgccagtttattcccgtactgtcacggtcgcttagtttagctgggataaacagtaggtatttcaaatcccactctttatgcattggcgcagctactacgcttgcacagtaaggcatggaaaatcaagttattcaaacggtaagtcgatgagatcggtcgcgaatcagttttacatccgttaagattgttattattacatttataaaccttgtgtatttatattgtatagcaaacgtaacgttcattaaatttttcacaggtaaaattcatatctgggttgtcagatcctccatcaaaaagagaacagctagggctgcaatatccaggacagggagaccagacc
gi|5 : taaatgttatcatcaattttagagtggttgtcattgcaaaatcagtgattgaatcgtttcattacataggcgatttcatttttgcagacagtatgtatatcagccattgtgatcttatgcatacatttcagtctatgtcattgtgtgttgagatgggtatacctttgaaccatgacaaatctgtttaacctgctacatgtttaacatttcttcgtttggagattgacactaatcaatattcatatgagaataccttgggaaatttaggtcaaggaacttctgaatctgatcttcagtgcctggtgggcaagataaatgtttttagcaaagccatttctggcagcagggcgttcagttgtagattttacaacgccaggattggacttaagccatcacatcatatcagaatcatttacataatgcgttaagacataaatacatggttaaggttttagaagggatttttattggtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaaccccctgcaactg--TTCT---GA-TCT-GATCT-CAGAGCT--GCGGGCAAGT--CTAAAT---TTTTAGCAACC-T-AT-TTCTGG-CA-GC-AGG-GCG-TTCATT-CG-ATGATTT-ACAACA--CAC-----TGTTTC-TAAGCCA-TCA-CA-T------C-TATATATGTATCATTCACACAATGC--TTAGAGACA-TCA-TAC-ATA--TCAA---TTTAAGAAGG-G-C-TTAATGTGTGTGTATTT-TT--C-TG--TTAGTG-GT--G-ATTC-TG--A-CA-G------GTGGATT-------A---GGTTGCCGAG-TGTTATTT--CATG---GTCGATG--GACT--ACTTCGAG---CTACAAAAGTTGGGGTC-T-T-CCTTTCA---------CACC-TCGA----ATACATCT-TTTAGA-CTTGT--AGCC-CATTG-T-GTTAGCC-TATAT----------C-CTA----TGGGCGTTGTAG----------------CATGGC-TAG--C-AT-TA-T---ATACATGC--AATATGGCCTTTGAACA---------ACA------------TAAACCAC---GGT-TTATGTAAGTACTGGTTTGATC--------------------CACT-------TCAGTTCCAAAGACACA-------CA-GGAAAACC-AATAA--TAC-CTG---TTTCTATAGCTTA-ACACACAGTGG-GGTCCAACTCCTTCAGACTGACTGGACCGCCTCATGCAG---CCGTCAC-TACAT--CATAACAC-AACACACCT-CAGCGACTAC-TCAAT----AGCC-TCAT-AAGA-G-GCAGCTTCTTTTCAT--GTGTAATA-GACG---TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCA-AATACAGTGG-CTCTTCAAGCA-TTTCTCTTA-ACAAAT--CACACAGGATAAA--AC-A-TAT-A-TTGATTG-C-ATATT---GTTCATACAAG-GATACAAATATTGAAATAATC--CAGTTAAGCG---TACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGC-ACTATAC-TGTCGG--TACCTGGCAT-G-TCAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-ACCTG---GG-GG-TTTGATCACATAAGGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-C--CTGT-CC-CTTAC-TAGTTGTCGGCTTACTTCAGTACGGCCC-C--GGTTG--G-TTAATTTAGGTGGGA---------------CATTCC-AA--TCCCACTC-TTAA-TGAGC--ATTGGCTGGCA-C----TACTCACCTTG-C---CAGCAA-GCA-TTGCT-AAAT-AACTTATTCAAGC--CCAA-A-TCAATG---GA-ATC-GTCAGA--------GCGA--TGTC-T-T-ACTATAT--C-CCA---AGC--AT------TGT---TCATTA-TT---
gi|6 : ccaGGGC-G-CTTTTAATTTCGCTAGCCA-TTGTGGATAGC-AGCAATGGTGATCTCCCTTATGCATGACATT-CATGACTAATGTAATTTGTGGGGTGGTGGATAG-CGAATCTTTCAAACCA--TGGACAAATCTGTTCATAGTTCCC--CTACACATGCTAAGGCATGCAT-ATCC-TCA-TTTT-AGA-TTGACACTA-TCA-TA-TTTGC-ATTATGA--ATACCTT----GG--GGAAATTTTAGGTCAAGGTCTTAAGGAAC--TTCCTGAGA-TCT-GATCTT-AGAGCCTGGTGG-CAAG---CTAA-TGTTTTT-A-CAAAA-CCAT-TTCTG--CA-GCAGGG-GCG-TTC-TTTCG-TTGATTT-ATAACAT-CACGGTT-TGGTCC-TAAGCCA-TCAACACT------A-TAT-CA-GAATCCATCACACAATGCG-TTA-AGACAATCAATAC-ATA--TCAGGTTTTAAGAAAGG-GGC-CTAATGT-TGTGTATTT-TTTTC-TG--TTAGTGCGT--GGATTCGTAT-A-CG-GT-GCTGGTGGATTTAGC-TTACTAGGTTGC-GAG-TGTTATTTTTCAGG---GTCAATGTGGACCTGAATTTCAGTGGCCACAAAA-TTGGG-TCTT-C-ACTTTC-ATCTTAATACACCATC-AATTTATACA--T-TTTAG-ACTTGT--A-CCGCATTG-TGGTTAGCTAATCA-----------CTCTA----TGGG-G-TGTTGGAGG------------CATGGC-TAG--CAATATATTTTCATGTGTGCA-AATATGGCCTTGGTACACATT-TTAAACA----G-TCAT--------ATATCGGGTTTATGT--GT-CTGGTTTGACCACTTA------------------------GTTCA------AAG-CACAACATATTCATTGG-ACAC-CATAA--TAC-CTGTTCTTTCTTAAGCTTA-CAACGCAGT-G-G-TC----TCCTTCAG-CCCACTGG--CGCCT-----AG---CAG---CGTACAGCACAGAACAC-AAC---CCTGCAGCT--TACTTCA-TGCAGAGCC-TCA-CCAGAGG-GCAGC--TTTTTCATTGGTGTAAT
gi|7 : AAACC-AATAA--TTC-CTG---TTTCTATAGCTTAACAAC-CAGTGG---TC----TC-TTCAG-CCAGCTG---CGCCT-----AG---CAG---C-TACAG--CA-AACACTAAC---CCT-CAGC---TAA-TCA-T----AGCCCTCATC--GA-G--CAGCTTTT---CAT--GTGTAATA-GAC----TAT-ACAATTC-T--C---GAAGAGCATTACACCAAAT-AAAGCA-AATACAG-GG-CA--TCAAGC-CTTTCTCTTA-ACATAT--CACAC-GAATTACC-A-----AT-A-TT-AT-G-C---ATCATTATTCATACAAG-ATTACAAATA--------ATC--CATTTAAGCG---TACA-TTTCTGCTATTAG-TTTTCATCGGAAGACAGTTTCATTAGGAATCC-C-ACTATAC-TGTC----TACCTCGGAC-A-GTAAGT-ATAACC--TCCAC-TA-------CAGGTTTCA-TTACAATTCACCTG---G----TTTGGATCACATGAAGAGGGACAAC-TATTAT-TCACTTC-CA-CGGC--CTGT-CC-CTTACCTAGTTGCCAG------------------------------CTTACTTCAG------TA--AT-GT--AGG-CATTCC-AA--TCCCACTCT--AACT--GC--ATTGG---GCA-C----TACTACCCTTG-C-A-CAGCAAGGCA--TGC---AAT-AAG-TA-TCAAGCC-CCAG-G-TCAA-----GA---CGGTC------------CGAATC-GC-TA--A-TAT-C--C-CCA---AGTAAAT------T-T------TTA-TT---AA-TATTA------------CA-TTCATTAG-----------GCTTT-GGG---TA-----T-----TTATTTACT-ATAGC-AA-CAT---ACACACTC-----AT-------------TAAGT----TTTT-CACA--GTCAATTTAATAATCT-GCTTGTCTAGAGCCT-CATTAAAAACAG-CACA-G-CA---GG--GC-GCC-GATC-CATGGACAA----GGGACCAGACCTAATTAA
gi|8 : CGCATATT-CT-G-CATTGTC--GC--TATGTCC--G-C-ATT--T--ATGCCCTGGA---------ACT----GTCCTCATTCGTCCTT-GTTG-TTTA--TTTATGAA-AAAGG-GGG------TTG-GT-TGTTGCCCATTCT--AT-TATTCC--G--AA--AGTT-TCA-T-CCG-C-AT-G-TTCGA-T--AT--TGTTT-ATACATTTTACTTAGCGTTT--TTTT------T--A--TGAT-AC-G-TCCAC---GAA-TCATT--CTCGAA--AT----C-A----C-A-CGG----G--G---AA----AC-ATTAC-GTGGCCAGGT-AAACCCT-TAATGTC-TTTGCGA-TCAACTTGAAA-AT-TG-TG--A----TATTGTA--CTC--TG-GATTT-AAC-T--------TT-TGCCCTTAATTA-AC--ACAAAATG-------T-G--G-CTGAAT-A--A-GAGCGAG-----TA--CGTATTAT-AT-GCGC-AG-A--AACGAC-T-CCCACACCGCGGCGCGC-CGA----AGGGGGGGGG----TTCAC-GAC-T-CT-A---ACAG---CCC-ACG---CATAAC-CT-GACT--AGGACAAAA-G--TAG-TG-T--ACGTGAA---CA-A-GGGGA--CGAT-AT-A--CT--ATTAT-C--TC-AA------TCATCCA-GGATTATCCCA-ATGGGGGAACTTTCAGCCCTACCTCA-CAACACT-TA-CA-CTTGACTTCCACTGGCGCGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GT-CCC---CTCGAA-CCA-TT-C-TGAT---CTGA-TCT---CAGAGCTGCGGGCAAGT
gi|8 : atatttGAACCATTCT---GA-TCT-GATC-TCAGAGCT--GCGGGCAAGT--CTAAATTTTTctaaatttttagc
gi|9 : atatttcgcatattctgcattgtcgctatgtccgcatttatgccctggaactgtcctcattcgtccttgttgtttatttatgaaaaagggggttggttgttgcccattctattattccgaaagtttcatccgcatgttcgatattgtttatacattttacttagcgttttttttatgatacgtccacgaatcattctcgaaatcacacggggaaacattacgtggccaggtaaacccttaatgtctttgcgatcaacttgaaaattgtgatattgtactctggatttaacttttgcccttaattaacacaaaatgtggctgaataagagcgagtacgtattatatgcgcagaaacgactcccacaccgcggcgcgccgaagggggggggttcacgactctaacagcccacgcataacctgactaggacaaaagtagtgtacgtgaacaaggggacgatatactattatctcaatcatccaggattatcccaatgggggaactttcagccctacctcacaacacttacacttgacttccactggcgcggcgcatgcatcccgtgcttgaagtcccctcTACAT-T-TTTAGACCTTGT--A-CC-CATTG-T-GCTAGCT-ATTGTAGGAGTGGGATTGTAGGAGTGGG-ATTGTAGGAGGCAAAACAAAAAACAAAAC-AAAAAC-ATATA-TTTCATGTGTGC--AATATGGCCTTAGTACGCATTCTT-AACAAAGAG-TAAT-CTAAATCACATCAGA-TTATGTG-GT-CTGTTA-GACCACTTATCATTGTGTCTCT-ACACTCAAATATTCAGTT-CAAAG-CACAACATATCCCAGGTAAACC-AATAAATT-C-CTG---ATTCTATATCTTG-CAAA-CAGTGG-G-TC----TCGTTAAG-GCAGCT-G-TTGCTT-----AG---CGGC--C-TACAG--CAGACCAC-GAC---CCT-CAGC---TAC-TCC-T----AGCT-TCATTCAAA-G-GCTGC--TTTTTCAA--GTGTAATA-GACCATTTATTACAATTG-T--CGTTGTA-AGTAA-GCACTAAAG-AA-GCAT-ACACAGTGG-CTATTCAGGC-CTTTCCCCTA-ACATATGGC-CACTGAA-TATTGACAA-TAC-ATTT-ATTG--TACA-C-TTATCCATACATG-AATACAAACA--------ATCCACAGCTAAAACA--TACA-TCTCTGCTATTTG-TTTTCAT-agc
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111
lowQualScore : 22222 2222222222222222 11 1 2222222222 1111 111 111 4444444444444 1 111 22222222222222 222222222222 11 1 1 33333333333333 22222222222222222 222 1 111 222 1 22222222 11111 111 1111 1 111 111 1111 22 2 111 1 333333333 1 11 1111 22222222222 111 111 66666666666666666666 11111 111 11 111 1 11111 1 111 44444444444 111 1 11 111 1 1 111 1 1 11 111 1111111 44444444 1111 1 111 11 1 66666666666666666666666666666666 111 11 11 1 1111 1 1 1 111 2222 2222222222 2222222222 444444444 1 22222 11111 1 444444 2 1 1 1 1 1 1 1 11 1 11 1 55555555555555 1 222222 222222 1 1 11 1 222 1 1 1 1 11 1 22 33 1 111 1 1 333333 2222 222222 1 2 1 333333333333333 2 1 22222 11 1 222 1 1 1 1 111 1 1 111 1 111 11 1 22222 11 1111 111 11 2222 1111 11 11 22222 11 11 1111 222 1 222 3333 333333333 111111 1 2222222222 111111 111 222 222222 222 111 11 111 1 111 1111 111 4444444444444 1111 3333333333333 1 11 222222 111111 1111111 11 11 22 55555555555555555555555555555555555555555555555 11 11 2222 111 1 111 1111 222 111 1111111 11 111 111 1111 11 11 2222 111111 11 11111 2 333 11111 2222222222 1 2222 11 2222222 11111 11111 2222222 22222 2222 11111111 2222 1111 111 1 111111 33333333333 11 1 111 111111 11111 111 222222222222 22222222222 22222222222 1111 111111 11111 3333333333333 1111 1 11 11 22222
lowQualScore : 5 5 5 5 77 77 77 5 5 11111 5 6666666666666666 7 00 5 5 1 77 5 5 5 0000000000 5 0 77 5 5 77 77 5 5 5 5 0 5 7777 77 5 333 1 8 000 77 8888888888888 5 1 5 5 000 5 6 77 1 66666 4 999 33333333333333 0 5 5 0 1 5 5 5 5 5 1 777777777777 33 5 77 1 1 5 22222222222222 1 5 5 11111111111111111 5 0 5 1 888 4 1 333 99 3 1 0 5 222 5 555 1 5 00000000 5 22222 9 6 6 6 6 888 6 6 6 2 6 3 5 5555 5 77 4 7 000 5 222 1111 66 0 5 44 5 5 0 6 6 6 6 000 1 6 222222222 1 3 33 6 0000 6 6 6 6 6 77777777777 3 6 888 99 0 4 111 1 5 55555555555555555555 8 8 77777 8 0 111 11 8 8 8 444 8 0 8 8 8 0 88888 0 000 55555555555 2 444 0 00 777 0 0 777 0 0 33 2 000 2 8888888 33333333 4444 0 777 33 0 33 77777777777777777777777777777777 666 0 0 00 33 0 4444 0 1 0 0 111 3 2 5555 2 4444444444 8888888888 000000000 0 2 00000 88888 0 1 000000 0 0 5 22 5 5 5 5 5 88 5 88 5 22222222222222 5 2 888888 22 888888 5 5 88 22 5 000 5 5 5 5 1 44 7 6 3 7 00 33 1 3 666 2 3 6 6 666666 7 7777 777777 3 0 3 555555555555555 3 1 3 7 33333 3 7 6 7 33 7 0 000 0 0 0 0 3 2 222 5 0 444 8 0 0 5 22 8 8 8 5 8 0 0 3 8 0 8 0 0 8 0 8 8 8 666 8 11 8 5 88888 11 8 6666 222 8 8 99 8 0 0 0 8 0000 0 6666 7777 11 11 11 00000 11 33 0000 5 5 1 5 1 111 0 3 6 6 3 6 888 6 6 6 6 7 6 1 7 1 88 6666 1 6 6 6 666666666 6 6 6 6 6 888888 7 3 3 1 6 9999999999 6 6 99 6 99 4 6 0 999999 000 333 6 6 000000 6 000 6 6 6 1 444 11 777 55 8 8 6 8 0 222 1 1 8 8 7777 6 6 3 99 6 6 6 6 222 0000000000000 3 4444 6 1 6666666666666 3 6 99 6 3 55 1 000000 999999 0000000 11 11 6 11 44444444444444444444444444444444444444444444444 33 77 3 7 1 5 3333 5 000 5 1 666 2222 4 5 000 5 5 000 1 3333333 33 6 5 000 5 555 5 5 2222 5 00 5 5 33 1 77 6 0000 6 333333 6 6 6 6 6 7 4 6 99 3 00 99999 0 6 111 22222 6 8888888888 99 3 6666 6 6 6 6 1 8 8 99 11 6 6 6 99 6 1111111 99 6 22222 6 22222 6 6 6 6 6 99 6 6 6 1 3 3 0000000 00000 222 1 7777 77 5 5 77 4 88888888 77 0000 4 5 2222 1 5 999 3 5 999 1 0 5 5 5 5 888888 22222222222 0 5 0 5 55 5 66 0 888 333 444444 00000 5 333 5 999999999999 5 5 77777777777 5 88888888888 77 6666 5 666666 44444 1111111111111 2222 5 5 5 5 22 0 0 66 5 5 1 55 77 5 0 5 5 33333 1
lowQualScore : . . . . .. .. .. . . ..... . ................ . .. . . . .. . . . .......... . . .. . . .. .. . . . . . . .... .. . ... . . ... .. ............. . . . . ... . . .. . ..... . ... .............. . . . . . . . . . . . ............ .. . .. . . . .............. . . . ................. . . . . ... . . ... .. . . . . ... . ... . . ........ . ..... . . . . . ... . . . . . . . .... . .. . . ... . ... .... .. . . .. . . . . . . . ... . . ......... . . .. . .... . . . . . ........... . . ... .. . . ... . . .................... . . ..... . . ... .. . . . ... . . . . . . ..... . ... ........... . ... . .. ... . . ... . . .. . ... . ....... ........ .... . ... .. . .. ................................ ... . . .. .. . .... . . . . ... . . .... . .......... .......... ......... . . ..... ..... . . ...... . . . .. . . . . . .. . .. . .............. . . ...... .. ...... . . .. .. . ... . . . . . .. . . . . .. .. . . ... . . . . ...... . .... ...... . . . ............... . . . . ..... . . . . .. . . ... . . . . . . ... . . ... . . . . .. . . . . . . . . . . . . . . . . . . ... . .. . . ..... .. . .... ... . . .. . . . . . .... . .... .... .. .. .. ..... .. .. .... . . . . . ... . . . . . . ... . . . . . . . . . .. .... . . . . ......... . . . . . ...... . . . . . .......... . . .. . .. . . . ...... ... ... . . ...... . ... . . . . ... .. ... .. . . . . . ... . . . . .... . . . .. . . . . ... ............. . .... . . ............. . . .. . . .. . ...... ...... ....... .. .. . .. ............................................... .. .. . . . . .... . ... . . ... .... . . ... . . ... . ....... .. . . ... . ... . . .... . .. . . .. . .. . .... . ...... . . . . . . . . .. . .. ..... . . ... ..... . .......... .. . .... . . . . . . . .. .. . . . .. . ....... .. . ..... . ..... . . . . . .. . . . . . . ....... ..... ... . .... .. . . .. . ........ .. .... . . .... . . ... . . ... . . . . . . ...... ........... . . . . .. . .. . ... ... ...... ..... . ... . ............ . . ........... . ........... .. .... . ...... ..... ............. .... . . . . .. . . .. . . . .. .. . . . . ..... .
lowQualScore : 7 7 7 0 11 99 99 7 7 33333 7 6666666666666666 1 77 0 7 4 99 7 7 7 6666666666 7 7 99 7 7 99 99 7 7 7 7 7 7 3333 99 7 333 4 4 000 99 1111111111111 7 4 7 7 000 7 6 99 4 77777 3 444 99999999999999 1 7 7 1 7 7 7 7 7 7 7 444444444444 66 7 99 4 4 7 11111111111111 7 7 7 11111111111111111 7 7 7 4 666 3 4 888 22 5 7 1 7 111 7 666 4 7 77777777 7 33333 3 7 7 7 7 333 7 7 7 5 7 2 7 3333 7 99 1 9 000 7 333 6666 99 8 0 00 0 7 7 7 7 7 0 222 7 7 222222222 7 3 33 7 0000 7 7 7 7 7 88888888888 7 7 333 88 7 2 777 0 6 88888888888888888888 0 0 00000 0 8 888 00 0 0 0 000 0 8 0 0 0 0 55555 0 222 55555555555 5 555 0 88 222 0 0 555 0 0 22 5 888 5 0000000 22222222 8888 0 000 88 0 55 88888888888888888888888888888888 222 2 2 22 88 0 8888 0 0 0 0 222 5 5 5555 5 8888888888 0000000000 000000000 0 5 22222 55555 0 0 555555 0 0 5 00 5 5 0 0 0 55 0 55 0 55555555555555 0 5 000000 00 555555 5 5 55 00 5 000 0 5 5 0 0 77 3 7 3 3 00 33 0 3 777 0 3 7 7 333333 3 0000 000000 3 3 3 000000000000000 7 0 3 3 00000 7 3 7 3 33 3 0 888 0 0 0 0 2 5 888 0 0 888 0 8 8 4 00 0 0 0 0 0 6 6 2 0 8 0 8 8 0 8 0 0 0 222 0 00 0 4 00000 00 0 0000 222 0 0 00 0 8 8 8 0 6666 8 2222 0000 00 88 22 00000 00 66 1111 7 7 7 0 4 444 7 5 7 7 3 7 333 7 7 7 7 3 7 0 3 0 33 2222 0 7 7 7 000000000 7 7 7 7 7 777777 2 5 3 0 7 2222222222 7 7 22 7 22 8 7 2 222222 888 222 7 7 000000 7 888 7 7 7 0 000 00 000 88 0 0 0 0 8 000 0 0 0 0 0000 7 7 2 22 7 7 7 7 555 3333333333333 5 2222 7 0 7777777777777 5 7 22 7 3 88 0 222222 222222 8888888 88 88 7 33 33333333333333333333333333333333333333333333333 33 55 5 5 3 7 9999 7 000 7 4 666 1111 3 7 111 7 7 000 4 1111111 66 6 7 000 7 777 7 7 1111 7 00 7 7 33 4 99 7 8888 7 555555 7 7 7 7 7 5 2 7 22 5 88 22222 0 7 000 33333 7 0000000000 22 3 7777 7 7 7 0 0 0 0 22 00 7 7 7 22 7 7777777 22 7 55555 7 55555 3 7 7 7 7 22 7 7 7 7 6 4 9999999 44444 999 4 0000 99 7 7 99 3 11111111 99 1111 3 7 1111 4 7 444 0 7 000 4 7 0 0 0 0 888888 55555555555 2 0 4 0 11 0 99 0 888 888 444444 99999 0 888 7 333333333333 7 7 11111111111 7 44444444444 99 6666 7 999999 33333 4444444444444 1111 7 7 0 0 00 7 7 44 7 7 7 99 99 0 7 7 7 11111 0
consensus : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GG-GTTT-GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T--NTT---TTTAA-TG-GC--GT----TGT--C-T-T-GGTG-CTGAAT-ATTACGGACTAGCA-TTTA--CGTTATATAAT-GC-C-AG-AAGAACGAC-T-C--------TGTTGAAG-AAA----AGGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAA-GCTTGG-TG--TAATGGGAA---CACA-GCGGAGCCGATGAT-A--CT--ATTCT-C-GTC-TAG-ACCTTCATCCA-GGA-TATCCC-ATG-GGGGGAAC--TCAGCCCTACCTCA-CAGCTTT-CA-CG-CTTGACTT-CACAGGC-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GT-CC--CC-CGAATCCA-TA-C-TAATAA-CCGATTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAGCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAGAT-CNGT--C-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ATTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCCGTTTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTG-GCTT-GCATG--TATGC-TATGA--TGG-GTTTTTTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTTGCCATTATGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTTG-G-TCC-TAAGCCA-TCA-CA-T------ATAT-CA-GAATCATTCACACAATGCG-TTA-AGACA-TCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGT--A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACCT-ACTTTCAGTGGCCACAAAA-TTGGG-TCTT-CACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTNCGACCAC--------------TT---------------CAC-----T------TTCAGTTCCAAAGCCACAACATATTCATGGNAAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CCGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGATTATT-AC-ATATA-TT-ATTG-CCATATT-TTATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAGCG---TACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTNGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGTCG--GCTTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTTAA-T--GC--ATTGG--N-GCAGCT-AC----TACCCTTG-C-A-CAGCAAGGCATT-GC--AAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---GAGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCCTT-GCGTATTTA-T-T---T---ATA--GCA---NA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-CACA-G-CAA-GGG--GCTGCCAGATC-CA-GGACA---G-GGGGACCAGACCTNATTAA
Reference ( family-719 ) : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GG-GTTT-GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T--NTT---TTTAA-TG-GC--GT----TGT--C-T-T-GGTG-CTGAAT-ATTACGGACTAGCA-TTTA--CGTTATATAAT-GC-C-AG-AAGAACGAC-T-C--------TGTTGAAG-AAA----AGGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAA-GCTTGG-TG--TAATGGGAA---CACA-GCGGAGCCGATGAT-A--CT--ATTCT-C-GTC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGCGGGGGAAC--TCAGCCCTACCTCA-CAGCTTT-CA-CG-CTTGACTT-CACAGGC-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GT-TC--CC-CGAATCCA-TA-C-TAATAA-CCGATTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAANCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAGAT-CGGT--C-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ANTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCTG-TTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTGCGCTT-GCATG--CATGCATATGA--TGGTGTTTTNTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTTGCCATTATGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTTGCGCTCC-TAAGCCA-TCA-CA-T------NTAT-CA-GAATCATTCACACAATGCG-TTA-AGACA-TCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGT--A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACCT-ACTTTCAGTGGCCACAAAA-TTGGG-TC-T-CACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTNCGACCAC--------------TTA--------------CAC-----T-----ATTCAGTTCCAAAGCCACAACATATTCATGGNAAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CCGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGATTATT-AC-ATATA-TT-ATTG-CCATATT-TTATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAGCC---TACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTNGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGTCG--GCTTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTTAA-T--GC--ATTGG--N-GCAGCT-AC----TACCCTTG-C-A-CAGCAAGGCATT-GC--AAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---GAGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCCTT-GCGTATTTA-T-T---T---ATA--GCA---NA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-CACA-G-CAA-GGG--GCTGCCAGATC-CA-GGACA---G-GGGGACCAGACCTNATTAA
gi|1 : CGCATATT--TAG-C-TTGTCTAGCAATATG--CCCG-CCATT--AATAT-CTCCGGA---------ACTT---GTTCTCAT--GTCCTT-GTTG-TT-A--TT-ATGAA-AAAGG-GGG--GA-GTTTTATGTGTGGCCCATTCT--AT-TATTCCGCG--AA--AGTTGTCATT-CCG-C-ATTG-TTCGA----AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGGCCTAAT-AC-G-T-CAC---GAA-TCATGTGCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGCCCAGTG---TACAATTAC-G--GCCAGGGAAAACTCTGTAATGTCCTTTGC-A-TCAACTTGAAA-ATCTGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T---TT---TTTAA-TG-GC--GT----TGT--C-C-T-GGTG-CTGAATTATTACG-ACTAGC--TTTA--CGTTATATAAT-GC-CCAG-AAGAACGAC-T-C--------TGTTGAAA-GAA------GGGGAAGGGCGTTC-AC-G-C-T-CTAA---ACAGTCTCCC-ACGCCACAAC-CTGGAC-AAGAGGAC-AAA-GCTTGG-TGCTTAATGCGAAACACACA-GCGGAACCGATGAT----CT--ATTCT-C-ATC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGCGGGCGGAC--TCAGCCCTACCTCAACAGCTTTTCA-CA-CTTGACTTTCACAGGC-TGGCGC-ATCGCA-TC-CCG-T-AGTTGAA-GCGTC--CG-CAAATCCA-TA-C-TAATAA-CCAATTCTTCGCGTAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCACAAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---GATGCATCA-ATTC-A-ATATGGCCC-CA--TGTTGCGCATTATT-CG--TGAATTCATAAC-CATGTTCA-TTCTA-TCATAGCCCACATTAGCCTACGTTGCCTGGTTTTGCCTG-ACATA-TA-TGCTCAGATACCGT--C-AATTCACTCGC-GCCTGACAA-A--TTTA-CCAAATAG-GTTCAGCATAACTTAAAACAACCACTGAAA--------ACAAA-CCA-TCTTAGCCATTT-AGCCCTGGA-CGGATGCCCATTTCATAATACTA--TCTTACAT-GCATATAGGTTTGC-TGCTCAATTCATAGACAAATCAACTTTACATCTCA--AATAC-TTAAAG---GGC-G--GGGGGGGAGGGGATGCAGAAAAAGTCACAGGG-CT--TC--A--TTA-TGGCTAGCACTA-----TCTG-TAACATTTGG-CAACACAGCACCTTAAGGCATTTGCTTTTTTTTT-AACTACAATGGGTCTTGCTATA-ATTCGCTGTGAGGTAT--CATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGAGGTCAAGCAGG------TGGGCCG------CCCAA-CAACACAACAATTATAAAACTTTTGGGCAGCGGGGGGATTCATAACGTAGGGTACATGAATCAATTTC-TCCTGGTTTAGTGCTGGTTAACCCTGCTGATTCTAAACTTCCA-TTTAAA-ACATGTAACAG-TTTTTATCATTGACACTGGTATTGAT-GTTGCGTTTGTG-TTATTT--TGCGACT----TTCTGAATTAACTTTTCTGCCCCCCAATGATTC-TTGGCCTT-ACATG--TATGCA----A--TGG-GTTTTTAAT-TGACACTGACAGTAACTG-TCAACTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATGCTT--TATCA-TTTTCGCGGTTGGC-TAGTCATGGCCCAAATCACTGATTGACAT-GTTTCATTACT-TGGGCCGATTTTTAAATTCGC-AGCCA-T-GTGGATAGCCAGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAAAT-GTGGG-TGGTG-ATGC-TAGATCTTTCAA-CCA--TG-AC--ATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCCATCA-TTT--AGA-TTGACACTAATCAATATTTTGCCAGTATGATAAAACCTTTGCCGGAAGGAATTTTTAGA-----GTC--AAGGAAC--TTC----GA-TCT-GATCTTCAGAGCCTGGTGGGCAAGCCACTAAATGTTTTTTA-CAAAG-C-AT-TTCT--GCA-GC-GGG-GCGCTTCAGTTCGATTGATTTTA-GACATACACGGTTGCGCTCCATAAGCCA-TCA-AA-T-------TAT-CA-GAATCATTCACACAA-GCG-TTA-AGA-A-TCAATACCATA-ATCAAGTTTTTAAGAAGGCGGC-TT----------AATGT-TGTGTATTT-TT--C-TGCTTTAGTGAG-T-GA------TTCA--TAT--ACCG-G----T-GCTGGTGGATTTAGC-TTACT-GGTTGC-GAGCTGTTATTTT-CATGCCCGTCAATG--GACCTAACTTTCAGT-GCCACAAAA-TTGGG-TC-T-CATTTTCAATCTTAAAACACC-TC-A----ATACAT-TCTTTAGAACTTGCCGA-CC-CATTGCT-GC-AGC---ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATATTTTCA-GTGTGCCGAATATGGCCTTAGTACACATT-TT-AACA----GATCAT-CTAACTCACATCGCG-TTATGCT-GT-CTGTTGCGACCAC----------------------------------------------TTCAGTTCCAAAGCCACAACATATTCATGGGAAAAC-AAT-A--T-CACTG---TTTCTATAGCTTA-CAAC-CAGTGGCGCTC----TCCTTCAG-CCAGCTGG-CCGCCT-A-GCCCCAGC-GT----ACAGC-CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AG-C-TCATTCAGA-GCGCAGCTTTTTTTCAT--GTGTAATAGGAC----TATTACTATTC-TCAC---GTA-AGCAT-ACACCAAATCAG-GC-AATACAGTGGCCTTTTCAAGCC-TTCTCTTACACATAT--CACACTGGATTATT-AC-ATATA-TT--TTGCCCATATT-TTATTCATACAAGCGATACAATA--------AATT--CAGTT-AAGCCCCTTACATTTTCTGCGATTAGTTTTTCAT-GGAAGACAG-TCAATTAGGAATCGGCA-CTATACGCGTCGGGCTACC-AGCAG-GT-CAGGTAATAACC--TCCAC-TA-------CA-GC--CAGTTACAATT-AC---C-T-GG-GGGTTTTGATCACATGAAGA-GGGCAACATATTTTGTCACTTC-CATCG-CCT--GTCCC-CTTAC-TAGTTGCCAGCTTACTTCGGTACTGCCC-C--GGTTAGCGCTTAA-TTAGGT-GGATAG-ACTGTTCAGGCCATTTC-AA--TCCCACTCTTTAA-T--GCCAATTGG--G-GCAGCT-AC----TACCCTTG-CTA-CAGCAACGCATT-GCTTAAAT-AAGTTATTCAAGCGCC-AGCG-T-CAATGGCCGAAATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCTTTCGCGTATTTA-------T---ATA--GCC---AA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGT--TC-GGAGCCTCCATTAAAAACAGCCACA-G-CAATGCG--GCTGCCAGATC-CA-GGACAAGGG-GGGGACCAGACCTCATTAA
gi|10 : GAGGAC-AAA--CTAGG-TG--TAATGGGA----CACA-GCGGAGC-GATGGT-A--CT--AATCT-C-A-C-TAG-ACACTCGTCCA-GTA-CAGTCC-ATG--GGGGAGT--CCAGCGT------A-CAGCT---CA--G-CTCAACTC-CAGAG-C-TGG-----T-GCA-GC-CCG-T-GCTTGAA--T-CCGTCC-CTAATAGC-TA---TAATAA-CCAACTCT---CGGAGCCGAGTACA----ATA-------------------------------------TGCA-AAATAATTATA--TTTTTCAGGGCC--CACAAC-CA-ATACACA-T---AATG-ATCA-ATTCTA-ATCTGGTCC-CA--T--TG-GCAT-ATCATG--T----TGATAAC-CATGTCCA-TTCTAAGCATAAAT-ATATTAGT-TACATTGC-TGGTT---CGTG-ACATA-CA--G-TCAG-T-CGGT--C-A----------------ACAA-AAGTTGG-CCAAAT-T-GTT--GCATAACTTAAA-CA-------------------------C--T---AGC-ATTG-AACTCTGGA-TGGATGT--ATTTCATA-TATCA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATAGACAACTCAA---TA-ATCTTA--ATTATAT-AAAATTCGAC-T--GGGGGA---------CAGAAAA-TTCACAGGG-TTGGTCAAA--TTA-TGGCGAGCACTAAGTCTTTTGTTTACATTTGG-CAAC
gi|11 : CGCATATT-CTAGCC-TTGTCTAGCA--ATG--C--G-C-ATTTAT-CCT-CTCCGGGTTTTATTTTACTCGGAATTCTCA-T-ATCC-TTGTTG-TT-A--TT-ATGAACAAAGG-GGGGTGG-GGTT-GT-TGTTGCCCATTC---AT-TATTCCG-G--AA--AGTT-TCATT-CCG-CAATGG-TTCGA-TAGATTGTG-TT-A-ACATTTTACTTAG---TC--TTTT-------ATG--TGATAACGG-T-CACAGGAAA-TCATTTCCTCGAC--ATGCTCCGAA-GCC-ATTGT-GCT--GGT----TACAATTAC-GT-ACCAGGGAAAACCCTGTAATGTC-TTTGC-A-TAAACTTGAAA-AT-TGTTG--ATAATT-T--TAC-C-C--TG-GA-TT-AACT----T--GTT---TTTAA-TG-GCT-GT----TGC--C-T-TGGGTG-CTGA---ATTA-GGACT-GCA-TTTA--CGTTAT-TAAT-GC-A-AG-A--GACGAC-T-C--------TGTTGAAG-AAA----AGGGGTGGGGGCGTTCCAC-G-C-TCCTAA---ACAATCTCCC--CGC-ATAAC-CTGGAC-TAGAGGAC-AAA-ACGTGGTTG--T-AT-GGAA---CACA-GCGG-GACGATGAT-AACTT--TTTCTCC-GTC-TAG-A-CTTCAT
gi|12 : ttatT--AATCT-C--TC-TAA-ACCTTCGTCCA-GTA-TATCCC-ATG--GAGGAAC--CCAGCCC-ACCGCT-AAGCT---CAACA-CT-AACAC-CACAG-C-TGG-----T-GAA-GC-CCG-T-GCTTGAA---------------TCCG-TA-CCTAATAA-CCAACTTT---CGTAGCCGAGTACAGGTAATGCACTGTTCGTTATCTTTGCCTTCA-CAC-AACAACG-TGCA-AAATGATTATA--TTTCTCAGGGCC--CACAAA-CA-TTACACG-T---AATA-ATCA-ATTC-AGATATCGCCC-CA--T--TG-GCAT-AT------------------------CCA-TTCTAAGCATAAAT-ATATTAGC-TACATTGC-TGATT---CGTG-ACATAGTAATGCTCAGTT-AGCTTCC-A-TTCACTCG--G---T-CAACA--TTTGGCCAAAT-T-GTT--GCATAACTCAAA-CAATCA-----A--------ACAAAACCA-C-----T-AT----------------ATGC--ATTTCATA-TATTA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATTGACAACTCA-----ACAATTTA--A--AG-T-AAAGTTCGACTGGTGGGGGG---------CAGAAAT-GTCACAGGGTTT-GTC--AACTTA-TGGCGAGCACT------TCCATTTACATTTGG-CAAC
gi|13 : G--TACCT-GCATTGT-CAGGT-ATAACC--TCCAC-TAGGCACTACAGGC--CAGTTGCAATT-ACATGCAT-GGTGGG-TTGAATCACATGAAGAGGGGCAAT-TATTTTGTCACTTC-CA-CG-CCTCTGT-CCATTTAC-TAGTTGCCAGTCTACT-CAGTACTG-CC-CCGGGTTG--G-TTAATTTAGGTGGGATAG-CCTGT--AGA-CATTCA-AA--TCCCA-TCTCT-------C--ATTGG--TTGCAGCTTAC----T-CCCTTATC-AGCAGCAAGGCATTTGG--TAAT-AAGTTATTCA-GCGCCCAG-G-TTCAATG---AGGATCGGTC-----------GCGAATCGTC-TAT-A-TAT-C--C-CCC---AG---AT------TGT---T-ATTA-TTT--AATTATTA------------TATTTCA-TAA-----------GGCTT-GCGTATTTA-T-T---TTATATA--GCA---TA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGTTGTC-GG-GCCTCCATTAAAAACAG-CACATG-CAA-GGGCAGC--CCAGATCTCA-GGACA---ACGGGGACCAGACTT
gi|14 : TTA--CGTTATTTAAT-GC---AG-AA--ACGAC-T-C--------TGTTGAAG-AAA----AGGGGGAGGGGCGTT-CACGG-C-T-CTAA---TCAGTCT-CC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAT-ACGTGG-TG--T-AT-AGAA---CACAGGCG--GCCGATGAA-A--CTTAATTCT-CTGTCGTAGAACCTTCAT-TA-GGA-TATCCCAATG-GGGGGAA---TCAG--CTACCTCA-CAGCTTTACA-AG-CTTGACGT-CACA-GC-GGGCGCAAT-GCACTC-CCG-TGGCTTAAG-GT-CC--CT-CAAATTCATTA-CTTAATA---CGATTCT---CGGAGCCGAGTACAGGTAATA----------TAT-------TTCG-CACAAAC---G-TGCA-AAATAATTATACTTTTCTCGGGACCCGCACAAA-CATTTGCACA-TTTGAATG-ATCATATTC-A-ATATGttctt
gi|15 : ATATT-TAAG-C-G-GTCTAGCA-T-TG--C--G-C--TT--C-TAT-CTCAGGG----------CT----GTTATTGT--GTTCTTTGTTG-TT-AATTT-ATGAA-AGAGGAGGG--GG-GGGT-GT---TTGCCCATTTTAAATGTATTCGG-T--AA--AATG-TCATT-CCATC-GGGG-TT-GATT--AT--TG-TT-T-AC---TGAGTTTG---TC--TGATGGAGGACGGG---AAT-AC-GTT-CAC---GAA-TCATTTCTTAGAA--AATCTG---G-GAC-A-TCT-------GTG----AGGATTACAGT-G---GCGGAATCGTTGTAATGTA--TTGT-AGTC----TG-AA-AT-TGTTT--A----T-A--TGTCC-T--TGTGA-TTAAAC-----TAAATG---CTTTA-TG-GC--TT----TATTGC-TAT-GGTG-----------AC-GAC-AGAT-TTTATTCGT--TATGAT-G--C-AGTAAGATCGACGTGC--------TGTT-ATG-AAA----GGGGGGG
gi|16 : tatgcaTACTTCCGTACTG-CCAC--GGTCG---CTTAATTTAGCTGGGATAG-ACAGT--AGG-TATTTC-AAAGTCC-ACTCTTTAG----GC--ATTGG--C-ACAGCT-AC----TACTCTTA-C-A-CAGCAAAGCATT-GC--AAATCAAGTTATTCAAGCGGC-AG-G-T-CAATG---AA-ATTGGTC-----------GCGTATCAGT-TAT-AC-AT-T--TGCTA---AG---AT------TGT---T-ATTA-TT---AAT-A--A------------CATT-CA-TAAGCCATTGATACGCCTT-GTGTATTTA-TAT---T---ATATGGCA---TACCAT---A--CATTT-----AT-------------TAAGT----TTTT-CATA-GGTCAAATTAAT-ATCTGGGTTGTC-AGATCCTCCATTATAAAGAG-GACA-G-C-A-GGG--CCTGCCAGATC-CA-GGACA---G-GGGGACCAAACCT
gi|17 : gtgCGCATATTTCTAG-C-TTGTCTAGCA-GATG--C--G-C-ATT--T--AT-CTCCGGA---------ACG----GT-CGCATT-GTCCTTTGTTGGTT-A--TT-ATGAA-AA----GGG--GG-GTTT-GT-TGTTGCCATTTCT--AT-TATTCCG-G--AATGGGGT-TCATTTCCG-C-ATGGATTCGA-T--AT--TG-TT-T-AAATTT-ACTTAG---TC--GTTT-------GGG---AAT-AC-G-T-CAC---GAA-TCATTTC-TCGAACAATTCTGC-AAAGCCGA-TGTTGGC--AGTGG--TACA-TTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAATGT-TGATG--A----T-TG-TA--C-C--TGCGA-TT-AAC-----T--TTTG--TTTAA-TG-GC--GT----TGT--C-C-T--TTGCCTGAAT-A-TACGGACTAt
gi|18 : tatCGCATATT-CTAG-C-T-GTCTAGCA-TATG--C--G-C-ATT--T-ATT-CTCCGGA---------ACG----GT-CTCATT-GTC-TTTGTTG-TTTA--TT-ATGAA-AAAGG-GGG--G----TT-GT-TGTTGCC-ATTCT--AT-ATTTCCG-G--AA--TGTT-CCATT-CCG-G-CTGG-TTCGAAT--AT--TG-TTTA-ACATTT-ACTTAG---TCCTTTTT------CGGG--TAAT-ACCG-T-CAC---GAAATCATTTTCTCGAA--ATTCTGC-AA-GCC---TGT-GGC--AGTG---T-CAATTGC-GT-GCCAGGGAAA-CCCTGTAA-GTC-TTTGC-A-TCAACTTGAAA-AT-TGTTGATA----T-T--TA--C-C--T--GA-TT-AAC-----T--TTG---TTTAA-TGCGC--GT----TGTTCC-T-T-GGTG-CTGAAT-ATTACGGACTA
gi|19 : tatC-AG-GAT-CAATG---GA-ATCGGTTCAGTTCTCTAAGCGAATCGGCCTATTAATAT-CTAC-CCGTAGAG---ATAATGGGTGTATAT-ATTC-TCTACAAT-TTTATTCTATAACGACCCTT-CA-TAA-----------GCTTT-GCGTA-TTA-T-T---T---ATG--ATAGATGA-CATTACAT-CATTCTTCCAATTTCACCACCTTAATAAGTATACTTTTGCACAGGGTCAAATTAATAATa
gi|2 : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--GAC-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AGAGG-GGG--GGAG----GC-TGTTGCCCATTTT--AT-TATTCCG-GATAA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG---------TTTTACTGAG---TC--TTTTTCTGTGCGGG---AAT-AC-G-T-CAC---GAA-TCATTT-CTAGAA--AATCTGG-AA-G-C-A-TGT-TGC--AG-GAATTACAATTGC-GT-GCCA-GGAAAACCCTGTAATGTC-TTTGT-G-TCAACTTGAAA-AT-TGTTAT-A----TGT--TA--C-CTTTG-GATTT-AACTAACAT--GCT---TTT-A-TG-GCTTTT----TGT--CAT-T-GGTG-CTGAAT-ATTACGGACTAGCATTTTA--CGTTAT-CAATGGC-C-AG-AAG-ACGAC-T-C--------TTGTGAAG-AAAAGGTAGGGGGGGGGGCGTTCCAC-A-CTT-CGAAT--ACAGTCTCCCAACGC-ACAACACTGGAC-TAGAGGAC-AAACGTTTGG-TG--TAATTGGAA---CACA-GCGGA-CCGATGATGA--CT--ATTCT-C--TC-TAG-ACCTTTATCTACAGA-TATCCC-ATG-GGAGGAAC--TCGGCCTAACCTCA-CAGCTTA-C--CGTCTTGACTT-CACA-GC-T-GCGC-AT-GCA-TTACCGAT-GCTTGAAGGT-TC--CT-CGAATCCA-TAGC-TAATAACCCAATTCT---CGGAG-CGAGTACAGGT-TTAC---------TTA-------TTCGACAC-AAC---GTTGCA-ATA-AAATATA---TTCTCGGGGCC--CACAAACCA-TTGCACATT---GATG-A-CA-ATTC-A-ATATGGCCCACATGT--TG-GC---ATT-CGGTT----TCATAACTTGTGTTCATTTCTATGCATAG-C-ACATTAGC-TTTGTTGC-TGGTT---TGTGCCCATA-TA-TGCTCAGAT-CCGT--CAA-TTCACTCGGTG---GACAA-A--TTTA-CCAAAT-TGGTT--GCATAACTTAAA-CAACCA-----ATCTTGAATACAAA-CCACT---AGC-ATTTAAGCCCTGGACCGGATGC--ATTTCATA-TACTATCT-TTACCATGCATATAGGTT-GCATGCTCA-T--------------A-TTTACATCTCAACATTACTT-AAAG-GCG---G--GGGGGG---------CATAAAA-GTCACAG------GTC--A--TTATTGGCTAGCACT------TCTG-TTACATTTGGCCAACAC-GCACCTTAGGGGCTTTGTTTTTTTTTTTAACTACAATGGGTC-TGCTATAGATTCG-TGT-AGGTATTTCAT-CCACCT--GT-CAATCTAC--------------CGTGGAAA-TGGGGTCAAGGGGGGGGGTGTGGGGGGGGGGAACCCAAACAACAC-ACAA--ATTCAAC-TTTGGGCA---GGGGGGTTCATAACGTA-GGTACATAAATCAATTTCATTTTGG-TTAGTGCT-GTAAACCCTGCTGATTCTAAACTTCC-ATTTAAATA-ATGTAACAGTTTTTTA-CATTTACACTGCTTTTGATGGT-G-GTCTGTGTTTATTTCCT--GGCTATGATTCTGAATTAAC--T-CTG--CCT-AATGATTCTTTGTGCTTGGCATGACTAT-CTTATGATTTGGTATTTTGTAT-TGACACTGACAGTAACTGTTCA-CTGTT-CATTTTG--TGTGCTA-TTCATG-CATAAA--TTTGAATG-TT--TATCA-TTTTCG-GGT-GGCTTAGTCATGGCAT-AATCACTGATTGA-AT-GTTTCATTA-T-TGGGC-AATT----------------A-T-GTG-----------------ATCTTC-TTATGCAT-AC-TTTCA-GACTAATGTAATT-GTGGG-TGGTG-AT-G-TAGATCTTTCAA-CCATTTG-AC-AATCTGTTCAT-----TC--CTACACAT-CTA--G-ATACA-TATCC-TCATTTT--ACATTTGACACTAATCAATA-TTTGC--TTAT--TGATACCTT----GG--GAA---TTTAGG-----GTC--AAGGAACT-TTCT---GA-TCTGGATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-CTAG-TTCT-GGCAGGC-GGGTGCG-TTCATTTCG-TAGATGTTACAACAT-CACGGTTG---TCC-T-AGCCACTCA-CA-CTATTAATTAT-CA-GAATCATTCACACAATGCGTTTA-AGACA-TCAATACC-TACGTCAAG-TTTTAAGAAGGCGGCTTT----------AATGT-TGTGTATTTCTT--CTTG--TTAGTGAGTTGGA------TTCA--TG---A-CGCG----TCGCTGGTGGATTTAGCTTTA---GGTGGC-GAG-TGTTACTTT-CA
gi|20 : atatAAT-GC-C-GG-AG--ACGAAAT-C--------TGTTGAAGAAAA----AGGGGGGAGGGCAAT-CAC-G-C-T-AAAAAGCACAGTCTCCC-ACGC----AC-C---ATATCGAAGAC-AAA--CTAGG-TG--TGTTGGG-A---CACA-GCGGAG-CGATGGC-A--CT--AATCT-C--TC-Tt
gi|21 : aagTTGTC-AGATCCTCCATTATAAAGAG-GACA-GTCAA-AGG--G-TGCCA-ATC-CA-G--CA---GCGGGGACCAGACTTAAT
gi|3 : ATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTT-A--ATTTACACT--TCTTGAT-GT-G-GT----G-TTATTTCCTGCAG-----ATTCTGAAT-AACTT--CTGCC----AATGATTC-TTG-GCTT-GCATA--CATG--TATGA--TGG-GTTTTTTATATGACACTG-------------------TACATTTTGGTTGTGCTATTTCATGC-ATCAATTTTGAAATG-TT---ATCA-TTTTCG-GGT-GGC-TAGTCATG---CAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTT-AATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-T-ATGCAT-ACATTTCA-GACTAATGTAATT--TGGG-TGGTG-ATG--TAGATCTTTCAA-CCA--TG-ACCATACTGTTCATT----CC--CTACACAT-CTA--GCATA-AT-ATCC-TCA-TTT--TAA-T-GACACTAATCAATA-TT-GC-ATTATGATA---CCTT----GG--GAAATTT--AGG-------C--AAGGAAC--T-CT---GA-TCT-GATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-ATATTCTGG-CA--C-GGG-GCG-TTCATT-CG-TG----TTACAACAT-CACGGTTG-G-TCC-TAAGCCA-TCA-CA-C------ATAT-CA-GAATCAT---CACAATGCG-TTA-AGACA-TCAATAC--TA-GTCAAGTTTT-AAGAAGG-GGC-TT----------AATGT-TGTGATTTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGTT-A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-TCAG---GTCAATG--GAC-T-ACTTTCAGTGGCCACAAAA-TTGGG-TC-TTCACTTTCA---TTTAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T--CTAGC-T-ATATT----------CTCTA-----GGG-GTTGTAGGAGGC------------ATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTGGTACACATT-TTTAACA----G-TCATACT------CATCGG--TTATGTG-GT-CTGTTG-GACCAC--------------TT--------------------------------CAGTTC-AAAGC-ACAACATATTCATGG-AAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CC--CT-A-G---CAGC-GT----ACAG--CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCAT-CAGA-G-GCAGCTTTTT--CAT--GTGTAATA-GAC-----ATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTTTTCA--CCTTTCTCTTA-ACATAT--CACACTGGGT-AT--AC-ATATAATT-ATTG-C-ATATT-T-ATTCATACAAG-GATACAA-T--------AATC--CAGTT-AAGC----TACA-TTTCTGCTATTAG-TTTTCAT-G-AAGACAGTTCAATTAGGAATCGGCAACTATAC-TGTCGG--TACCTTGCAT-GTTCAGGT-ATAACC--TCCACATA-------CAGGC--CAGTTACA-TT-AC---C-T-GG-G---TTTGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-C-T--GT-CC-CTTAC-TAGTTGCC-GCTTACTTCAGTACTG-CC----GGTTG--GTTTAATTTAGG-GGGATAGTAC-GT--AGG-CATTCC-AA-----CA-TCTT-AA-T--GC--ATTTG--G-GCAGCT-ACATACTACCCTTG-C-A-CAGCAAGGCATT-GC--TAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---G-GATCGGTC-----------G-GAATCGGC-TAT-A-TAT-C--C-CCA---AG---AT------TG----T-ATTATTT---AAT-ATTA------------CATT-CA-TAA-----------GCTTT-GCGTATTTATT-T---T---ATA--GCA---TA-CAT---A--CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC--GAGCCTCCATTAAAAACAG-CACA-G-CAA--GG--GCTGCCAGATC-CA-GGACA---A-GGGGACCAGACCTCATTAA
gi|4 : TAAATG-TTATCATCAATTTTAG-AGT-GGT-T-GTCATTGCA-AAATCAGTGATTGA-ATCGTTTCATTA-CATAGGC-GATTTC-ATTTTTGC-AGACAGT-ATGTATATC-AGCCATTGTGATCT----TATGCAT-ACATTTCA-GTCTA-TGTCATT-GTGTG-TTGAG-ATGGGTATACCTTTGAA-CCA--TG-ACAAATCTGTTTAA-----CCTGCTACATGT-TTA------ACATT-TCT-TCG-TTTGGAGA-TTGACACTAATCAATA-TT---CAT-ATGAGAATACCTT----GG--GAAATTT---AG-----GTC--AAGGAAC--TTCT---GAATCT-GATCTTCAGTGCCTGGTGGGCAAG---ATAAATGTTTTTAG-CAAAGCC-AT-TTCT-GGCA-GC-AGG-GCG-TTCAGTT-G-TAGATTTTACAACGC-CAGGATTGGACT---TAAGCCA-TCA-CA-TC-----ATAT-CA-GAATCATTTACATAATGCG-TTA-AGACA-TAAATA-CATG-GTTAAGGTTTT-AGAAGG-GAT-TTTTATTGGTNNNNNNN-NNNNNNNNN-NN--N-NN--NNNNNNNN-NNGAACCCCCTGCAACTGTTCA-CG-GACAGT-GCTGTTTGATATAGC-CTA---GGTTGC-TCG-TGTTATTTT-AAAG---GTCAATG--GGCCT-AGTTTCAGTGGCCACAAAA-TGGGG-TCTT-TAC-TTCAATCTTAAAG-ACA-TT-A----TTACGT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-GTT-T----------CAGTA----TGGG-GTTGTAGAAGGC-----------AA-AACATAA--C-ATATA-TTTCATGTGTGC--AATATGACATTCTTA-ACA------AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-ATGTTA-GACCACTTATCATTGTGTCTTTA--------------CACTCAAAT-----ATTCAGTT-CAAAG-CACAACATATCCCTGACAAAACGAATAAATT-C-CTG---ATTCTACATCTTG-CAAA-CAGTAG-A-TT----TTGTTCAG-GCAGCTGG--TGCCT-A-G---CGGC-CT----ACAG--CAGACCAT-AAC---CCT-CAGC---TTA-TCC-T----AGCT-TCATTCAGG-G-GCAGC--TATTTCAA--GTGT--TA-CAT----T-TTA----TCGT--T---GTA-AGGAA-ACACCAAAG-AA-GCATATACAGTGG-CTATTCAGGTATTTCCCCTA-ACACAT--GACACTGGA-TATT-ACAATACATTT-ATTG--CATA-T-TTATTCATACATG-GATACGAGT--------AATC--CAGCTAAAACA---TACA-TTTCTGCAATTAG-TTTTCAT-TGAATACATATCTATTAGGAATCGGCA-CCATAC-TGTCGG--TACTAAGCAT-GT-TAGGA-ATAATTTGTCCAG-TT-------CAGGC--CAGGGATAATT-AC---A-TGGG-GGG-TTCGATCACAGAAAGCGGGATAAC-TATTTTGTCACTTCTCA-GT-TCC--G--CT-CTTAA-TCGTTGCCAGTTTATTCCCGTACTG-TCAC--GGTC---GCTTAGTTTAGCTGGGATAA-ACAGT--AGG-TATTTCAAA--TCCCACTCTTT-A-T--GC--ATTGG--C-GCAGCT-AC----TACGCTTG-C-A-CAGTAAGGCATG-GA--AAATCAAGTTATTCAAACGGT-AA-G-T-CGAT----GAGATCGGTC-----------GCGAATCAGT-TTT-AC-AT-C--CGTTA---AG---AT------TGT---T-AT----------T-ATTA------------CATT-TA-TAA-----------ACCTT-GTGTATTTA-TATTG-T---ATA--GCA---AA-CGT---AA-CGTTC-----AT-------------TAAAT----TTTT-CACA-GGTAAAATTCAT-ATCTGGGTTGTC-AGATCCTCCATCAAAAAGAG-AACA-G-CTA--GG--GCTGCAATATC-CA-GGACA---G-GGAGACCAGACCa
gi|5 : --TTCT---GA-TCT-GATCT-CAGAGCT--GCGGGCAAGT--CTAAAT---TTTTAGCAACC-T-AT-TTCTGG-CA-GC-AGG-GCG-TTCATT-CG-ATGATTT-ACAACA--CACTGTT-----TC-TAAGCCA-TCA-CA-T------CTATATATGTATCATTCACACAATGC--TTAGAGACA-TCA-TAC-ATA--TCAA---TTTAAGAAGG-G-C-TT----------AATGTGTGTGTATTT-TT--C-TG--TTAGTG-G-TG-A------TTC---TG---A-CA-G----------GTGGATT-------A---GGTTGCCGAG-TGTTATTT--CATG---GTCGATG--GAC-T-ACTTCGAG---CTACAAAAGTTGGGGTC-T-TCCTTTCA---------CACC-TCGA----ATACATCT-TTTAGA-CTTGT--AGCC-CATTG-T-GTTAGCCT-AT-AT----------C-CTA----TGGGCGTTGTAG----------------CATGGC-TAG--C-AT-TA-T---ATACATGC--AATATGGCCTTTGAACA---------ACA------------TAAACCAC---GGT-TTATGTAAGTACTGGTTTGATC---------------------------------CAC-----T-------TCAGTTCCAAAGACACA-------CA-GGAAAACC-AATAA--TAC-CTG---TTTCTATAGCTTA-ACACACAGTGG-GGTCCAACTCCTTCAGACTGACTGGACCGCCTCATG---CAGCCGTCACTACAT--CATAACAC-AACACACCT-CAGCGACTAC-TCAAT----AGCC-TCAT-AAGA-G-GCAGCTTCTTTTCAT--GTGTAATA-GACG---TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTCTTCAAGCATTTCTCTTA-ACAAAT--CACACAGGATAAA--AC-ATATA-TTGATTG-C-ATATT---GTTCATACAAG-GATACAAATATTGAAATAATC--CAGTT-AAGCG---TACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTGGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTTGATCACATAAGGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGTCGGCTTACTTCAGTACGGCCC-C--GGTTG--G-TTAATTTAGGTGGGA---------------CATTCC-AA--TCCCACTC-TTAA-TGAGC--ATTGGCTG-GCA-CT-AC----TCACCTTG-C---CAGCAA-GCATT-GCT-AAAT-AACTTATTCAAGC-CC-AA-A-T-CAATG---GA-ATC-GTCAGA--------GCGA--TGTC-T-T-ACTATAT--C-CCA---AGC--AT------TGT---TCATTA-TT---
gi|6 : ccaGGGC-G-CTTTTAATTTCGCTAGCCA-TTGTGGATAGC-AGCAATGGTGATCTCCCTTATGCATGACATT-CATGACTAATGTAATTTGTGGGGTGGTGGATAG-CGAATCTTTCAAACCA--TGGACAAATCTGTTCATAGTTCCC--CTACACATGCTAAGGCATGCAT-ATCC-TCA-TTTT-AGA-TTGACACTA-TCA-TA-TTTGC-ATTATGA--ATACCTT----GG--GGAAATTTTAGGTCAAGGTCTTAAGGAAC--TTCCTGAGA-TCT-GATCTT-AGAGCCTGGTGG-CAAG---CTAA-TGTTTTT-A-CAAAA-CCAT-TTCTG--CA-GCAGGG-GCG-TTC-TTTCG-TTGATTT-ATAACAT-CACGGTT-TGGTCC-TAAGCCA-TCAACACT------ATAT-CA-GAATCCATCACACAATGCG-TTA-AGACAATCAATAC-ATA--TCAGGTTTTAAGAAAGG-GGC-CT----------AATGT-TGTGTATTT-TTTTC-TG--TTAGTGCG-TGGA------TTCG--TAT--A-CG-G----T-GCTGGTGGATTTAGC-TTACTAGGTTGC-GAG-TGTTATTTTTCAGG---GTCAATGTGGACCTGAATTTCAGTGGCCACAAAA-TTGGG-TCTT-CACTTTC-ATCTTAATACACCATC-AATTTATACA--T-TTTAG-ACTTGT--A-CCGCATTG-TGGTTAGC-TAATCA-----------CTCTA----TGGG-G-TGTTGGAGG------------CATGGC-TAG--CAATATATTTTCATGTGTGCA-AATATGGCCTTGGTACACATT-TTAAACA----G-TCAT--------ATATCGGGTTTATGT--GT-CTGGTTTGACCAC--------------TT---------------------------------AGTT-CAAAG-CACAACATATTCATTGG-ACAC-CATAA--TAC-CTGTTCTTTCTTAAGCTTA-CAACGCAGT-G-G-TC----TCCTTCAG-CCCACTGG--CGCCT-A-G---CAGC-GT----ACAGCACAGAACAC-AAC---CCTGCAGCT--TACTTCA-TGCAGAGCC-TCA-CCAGAGG-GCAGC--TTTTTCATTGGTGTAAT
gi|7 : AAACC-AATAA--TTC-CTG---TTTCTATAGCTTAACAAC-CAGTGG---TC----TC-TTCAG-CCAGCTG---CGCCT-A-G---CAGC--T----ACAG--CA-AACACTAAC---CCT-CAGC---TAA-TCA-T----AGCCCTCATC--GA-G--CAGCTTTT---CAT--GTGTAATA-GAC----TAT-ACAATTC-T--C---GAAGAGCATTACACCAAAT-AAAGCAAATACAG-GG-CA--TCAAGCCTTTCTCTTA-ACATAT--CACAC-GAATTACC-A----ATA-TT-AT-G-C---ATCATTATTCATACAAG-ATTACAAAT--------AATC--CATTT-AAGCG---TACA-TTTCTGCTATTAG-TTTTCATCGGAAGACAGTTTCATTAGGAATCC-CA-CTATAC-TGTC----TACCTCGGAC-AG-TAAGT-ATAACC--TCCAC-TA-------CAGGTTTCA-TTACAATTCAC---C-T-GG-T---TTGGATCACATGAAGAGGGACAAC-TATTAT-TCACTTC-CA-CGGCCT--GT-CC-CTTACCTAGTTGCCAGCT--------TACT----------TCA--G--TAAT-----------------GT--AGG-CATTCC-AA--TCCCACTCT--AACT--GC--ATTGG----GCA-CT-AC----TACCCTTG-C-A-CAGCAAGGCA-T-GC---AAT-AAG-TA-TCAAGCCCC-AG-G-T-CAA-----GA---CGGTC------------CGAATC-GC-TA--A-TAT-C--C-CCA---AGTAAAT------T-T------TTA-TT---AAT-ATTA------------CATT-CATTAG-----------GCTTT-GGGTATTTA-T-TTACT---ATA--GCA----A-CAT---ACACACTC-----AT-------------TAAGT----TTTT-CACA--GTCAATTTAATAATCT-GCTTGTCTAGAGCCT-CATTAAAAACAG-CACA-G-CA---GG--GC-GCC-GATC-CATGGACA-----AGGGACCAGACCTAATTAA
gi|8 : CGCATATT-CT-G-CATTGTC--GC--TATGTCC--G-C-ATT--T--ATGCCCTGGA---------ACT----GTCCTCATTCGTCCTT-GTTG-TTTA--TTTATGAA-AAAGG-GGG------TTG-GT-TGTTGCCCATTCT--AT-TATTCC--G--AA--AGTT-TCA-T-CCG-C-AT-G-TTCGA-T--AT--TGTTT-ATACATTTTACTTAGCGTTT--TTTT------T--A--TGAT-AC-G-TCCAC---GAA-TCATT--CTCGAA--AT----C-A----C-A-CGG-GGA--A-------AC-ATTAC-GTGGCCAGGT-AAACCCT-TAATGTC-TTTGCGA-TCAACTTGAAA-AT-TG-TG--A----TATTGTA--CTC--TG-GATTT-AAC-----T--TTTGCCCTTAATTA-AC--ACAAAATG-------T-G--G-CTGAAT-A--A-GAGCGAG-----TA--CGTATTAT-AT-GCGC-AG-A--AACGAC-T-CCCACACCGCGGCGCGC-CGA----AGGGGGGGGG----TTCAC-GAC-T-CT-A---ACAG---CCC-ACGC-ATAAC-CT-GAC-T--AGGACAAAA-G--TAG-TG--T-ACGTGAA---CA-A-GGGGA--CGAT-AT-A--CT--ATTAT-C--TC-AA------TCATCCA-GGATTATCCC-A-ATGGGGGAACTTTCAGCCCTACCTCA-CAACACT-TA-CA-CTTGACTTCCACTGGCGCGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GT-CC--CCTCGAA-CCA-TT-C-TGAT---CTGA-TCT---CAGAGCTGCGGGCAAGT
gi|8 : atatttGAACCATTCT---GA-TCT-GATC-TCAGAGCT--GCGGGCAAGT--CTAAATTTTTctaaatttttagc
gi|9 : atatttcgcatattctgcattgtcgctatgtccgcatttatgccctggaactgtcctcattcgtccttgttgtttatttatgaaaaagggggttggttgttgcccattctattattccgaaagtttcatccgcatgttcgatattgtttatacattttacttagcgttttttttatgatacgtccacgaatcattctcgaaatcacacggggaaacattacgtggccaggtaaacccttaatgtctttgcgatcaacttgaaaattgtgatattgtactctggatttaacttttgcccttaattaacacaaaatgtggctgaataagagcgagtacgtattatatgcgcagaaacgactcccacaccgcggcgcgccgaagggggggggttcacgactctaacagcccacgcataacctgactaggacaaaagtagtgtacgtgaacaaggggacgatatactattatctcaatcatccaggattatcccaatgggggaactttcagccctacctcacaacacttacacttgacttccactggcgcggcgcatgcatcccgtgcttgaagtcccctcTACAT-T-TTTAGACCTTGT--A-CC-CATTG-T-GCTAGC-T-ATTGTAGGAGTGGGATTGTAGGAGTGGG-ATTGTAGGAGGCAAAACAAAAAACAAAAC-AAAAAC-ATATA-TTTCATGTGTGC--AATATGGCCTTAGTACGCATTCTT-AACAAAGAG-TAAT-CTAAATCACATCAGA-TTATGTG-GT-CTGTTA-GACCAC--------------TTATCATTGTGTCTCTACAC-----TCAAATATTCAGTTC-AAAGC-ACAACATATCCCAGGTAAACC-AATAAATT-C-CTG---ATTCTATATCTTG-CAAA-CAGTGG-G-TC----TCGTTAAG-GCAGCTG--TTGCTT-A-G---CGGC-CT----ACAG--CAGACCAC-GAC---CCT-CAGC---TAC-TCC-T----AGCT-TCATTCAAA-G-GCTGC--TTTTTCAA--GTGTAATA-GACCATTTATTACAATTG-T--CGTTGTA-AGTAA-GCACTAAAG-AA-GCATACACAGTGG-CTATTCAGGCCTTTCCCCTA-ACATATGGC-CACTGAA-TATTGACAATACATTT-ATTG--TACA-C-TTATCCATACATG-AATACAAAC--------AATCCACAGCTAAAACA---TACA-TCTCTGCTATTTG-TTTTCAT-agc
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 22222 2222222222222222 11 1 2222222222 1111 111 111 4444444444444 1 111 22222222222222 222222222222 11 1 1 33333333333333 22222222222222222 222 1 111 222 1 22222222 11111 111 1111 1 111 111 1111 22 1111111 1 333333333 1 11 1111 2222222222 111 111 66666666666666666666 11111 111 11 111 1 11111 1 111 44444444444 111 1 111 1 1 111 1 1 11 22222 1111 44444444 1111 1 111 11 1 66666666666666666666666666666666 111 11 11 1 1111 1 1 1 111 2222 2222222222 2222222222 444444444 1 22222 11111 1 444444 1 1 1 1 1 1 1 11 1 11 1 55555555555555 1 222222 222222 1 1 11 1 222 1 1 1 1 11 1 22 33 1 111 1 1 333333 2222 222222 1 1 1 1 11 22222222 1 1 22222 11 1 222 1 1 1 1 111 1 1 111 1 111 11 1 22222 11 1111 111 11 2222 1111 11 11 22222 11 11 1111 222 1 222 22222 3333333333 111111 1 2222222222 111111 111 222 222222 222 111 11 111 111 1111 111 4444444444444 1111 3333333333333 1 11 222222 111111 1111111 11 11 22 44444444444444444444444444444 11 11 2222 111 1 111 1111 222 111 1111111 11 111 111 1111 11 11 2222 111111 11 11111 2 333 11111 2222222222 1 111 11 2222222 11111 11111 2222222 22222 2222 11111111 2222 1111 111 1 111111 33333333333 11 1 111 111111 11111 111 222222222222 22222222222 22222222222 1111 111111 11111 3333333333333 1111 1 11 11 22222
lowQualScore : 5 5 5 5 77 77 77 5 5 11111 5 6666666666666666 7 00 5 5 1 77 5 5 5 0000000000 5 0 77 5 5 77 77 5 5 5 5 0 5 7777 77 5 333 1 8 000 77 8888888888888 5 1 5 5 000 5 6 77 1 66666 4 999 33333333333333 0 5 5 0 1 5 5 5 5 5 1 777777777777 33 5 77 1 1 5 22222222222222 1 5 5 11111111111111111 5 0 5 1 888 4 1 333 99 3 1 0 5 222 5 555 1 5 00000000 5 22222 9 6 6 6 6 888 6 6 6 2 6 3 5 5555 5 77 4 7 000 5 222 1111 66 0 5 44 5 5 0 6 6 6 7777777 1 1 6 222222222 1 3 33 6 0000 6 6 6 6 6 4444444444 3 6 888 99 0 4 111 1 5 55555555555555555555 8 8 77777 8 0 111 11 8 8 8 444 8 0 8 8 8 0 88888 0 000 55555555555 2 444 0 9 777 0 0 777 0 0 33 2 44444 1 4444 33333333 4444 0 777 33 0 33 77777777777777777777777777777777 666 0 0 00 33 0 4444 0 1 0 0 111 3 2 5555 2 3333333333 8888888888 000000000 0 2 00000 88888 0 1 000000 2 444 0 5 22 5 5 5 5 5 88 5 88 5 22222222222222 5 2 888888 22 888888 5 5 88 22 5 000 5 5 5 5 1 44 7 6 3 7 00 33 1 3 666 2 3 6 6 666666 7 7777 777777 3 3 3 3 88 22222222 3 3 7 33333 3 7 6 7 33 7 0 000 0 0 0 0 3 2 222 5 0 444 8 0 0 5 22 8 8 8 5 8 0 0 3 8 0 8 0 0 8 0 8 8 8 666 8 11 8 5 88888 11 8 6666 222 8 8 99 8 0 0 0 8 0000 0 6666 7777 11 11 11 00000 11 33 0000 5 5 1 5 1 111 0 3 6 6 3 6 888 6 6 6 6 7 6 1 7 1 88 00000 6 6 6 8888888888 6 6 6 888888 7 3 3 1 6 9999999999 6 6 99 6 99 4 6 0 999999 000 333 6 6 000000 6 000 6 6 6 1 444 11 777 55 8 8 0 0 0 222 1 1 8 8 7777 6 6 3 99 6 6 6 6 222 0000000000000 3 4444 6 1 6666666666666 3 6 99 6 3 55 1 000000 999999 0000000 11 11 6 11 11111111111111111111111111111 33 77 3 7 1 5 3333 5 000 5 1 666 2222 4 5 000 5 5 000 1 3333333 33 6 5 000 5 555 5 5 2222 5 00 5 5 33 1 77 6 0000 6 333333 6 6 6 6 6 7 4 6 99 3 00 99999 0 6 111 22222 6 8888888888 99 3 111 7 6 6 6 6 1 8 8 99 11 6 6 6 99 6 1111111 99 6 22222 6 22222 6 6 6 6 6 99 6 6 6 1 3 3 0000000 00000 222 1 7777 77 5 5 77 4 88888888 77 0000 4 5 2222 1 5 999 3 5 999 1 0 5 5 5 5 888888 22222222222 0 5 0 5 55 5 66 0 888 333 444444 00000 5 333 5 999999999999 5 5 77777777777 5 88888888888 77 6666 5 666666 44444 1111111111111 2222 5 5 5 5 22 0 0 66 5 5 1 55 77 5 0 5 5 33333 1
lowQualScore : . . . . .. .. .. . . ..... . ................ . .. . . . .. . . . .......... . . .. . . .. .. . . . . . . .... .. . ... . . ... .. ............. . . . . ... . . .. . ..... . ... .............. . . . . . . . . . . . ............ .. . .. . . . .............. . . . ................. . . . . ... . . ... .. . . . . ... . ... . . ........ . ..... . . . . . ... . . . . . . . .... . .. . . ... . ... .... .. . . .. . . . . . . ....... . . . ......... . . .. . .... . . . . . .......... . . ... .. . . ... . . .................... . . ..... . . ... .. . . . ... . . . . . . ..... . ... ........... . ... . . ... . . ... . . .. . ..... . .... ........ .... . ... .. . .. ................................ ... . . .. .. . .... . . . . ... . . .... . .......... .......... ......... . . ..... ..... . . ...... . ... . . .. . . . . . .. . .. . .............. . . ...... .. ...... . . .. .. . ... . . . . . .. . . . . .. .. . . ... . . . . ...... . .... ...... . . . . .. ........ . . . ..... . . . . .. . . ... . . . . . . ... . . ... . . . . .. . . . . . . . . . . . . . . . . . . ... . .. . . ..... .. . .... ... . . .. . . . . . .... . .... .... .. .. .. ..... .. .. .... . . . . . ... . . . . . . ... . . . . . . . . . .. ..... . . . .......... . . . ...... . . . . . .......... . . .. . .. . . . ...... ... ... . . ...... . ... . . . . ... .. ... .. . . . . . ... . . . . .... . . . .. . . . . ... ............. . .... . . ............. . . .. . . .. . ...... ...... ....... .. .. . .. ............................. .. .. . . . . .... . ... . . ... .... . . ... . . ... . ....... .. . . ... . ... . . .... . .. . . .. . .. . .... . ...... . . . . . . . . .. . .. ..... . . ... ..... . .......... .. . ... . . . . . . . . .. .. . . . .. . ....... .. . ..... . ..... . . . . . .. . . . . . . ....... ..... ... . .... .. . . .. . ........ .. .... . . .... . . ... . . ... . . . . . . ...... ........... . . . . .. . .. . ... ... ...... ..... . ... . ............ . . ........... . ........... .. .... . ...... ..... ............. .... . . . . .. . . .. . . . .. .. . . . . ..... .
lowQualScore : 7 7 7 0 11 99 99 7 7 33333 7 6666666666666666 1 77 0 7 4 99 7 7 7 6666666666 7 7 99 7 7 99 99 7 7 7 7 7 7 3333 99 7 333 4 4 000 99 1111111111111 7 4 7 7 000 7 6 99 4 77777 3 444 99999999999999 1 7 7 1 7 7 7 7 7 7 7 444444444444 66 7 99 4 4 7 11111111111111 7 7 7 11111111111111111 7 7 7 4 666 3 4 888 22 5 7 1 7 111 7 666 4 7 77777777 7 33333 3 7 7 7 7 333 7 7 7 5 7 2 7 3333 7 99 1 9 000 7 333 6666 99 8 0 00 0 7 7 7 7 7 5555555 0 7 7 222222222 7 3 33 7 0000 7 7 7 7 7 8888888888 7 7 333 88 7 2 777 0 6 88888888888888888888 0 0 00000 0 8 888 00 0 0 0 000 0 8 0 0 0 0 55555 0 222 55555555555 5 555 0 8 222 0 0 555 0 0 22 5 00000 0 2222 22222222 8888 0 000 88 0 55 88888888888888888888888888888888 222 2 2 22 88 0 8888 0 0 0 0 222 5 5 5555 5 8888888888 0000000000 000000000 0 5 22222 55555 0 0 555555 0 000 0 5 00 5 5 0 0 0 55 0 55 0 55555555555555 0 5 000000 00 555555 5 5 55 00 5 000 0 5 5 0 0 77 3 7 3 3 00 33 0 3 777 0 3 7 7 333333 3 0000 000000 3 3 3 3 33 00000000 3 3 3 00000 7 3 7 3 33 3 0 888 0 0 0 0 2 5 888 0 0 888 0 8 8 4 00 0 0 0 0 0 6 6 2 0 8 0 8 8 0 8 0 0 0 222 0 00 0 4 00000 00 0 0000 222 0 0 00 0 8 8 8 0 6666 8 2222 0000 00 88 22 00000 00 66 1111 7 7 7 0 4 444 7 5 7 7 3 7 333 7 7 7 7 3 7 0 3 0 33 88888 7 7 7 5555555555 7 7 7 777777 2 5 3 0 7 2222222222 7 7 22 7 22 8 7 2 222222 888 222 7 7 000000 7 888 7 7 7 0 000 00 000 88 0 0 8 8 8 000 0 0 0 0 0000 7 7 2 22 7 7 7 7 555 3333333333333 5 2222 7 0 7777777777777 5 7 22 7 3 88 0 222222 222222 8888888 88 88 7 33 22222222222222222222222222222 33 55 5 5 3 7 9999 7 000 7 4 666 1111 3 7 111 7 7 000 4 1111111 66 6 7 000 7 777 7 7 1111 7 00 7 7 33 4 99 7 8888 7 555555 7 7 7 7 7 5 2 7 22 5 88 22222 0 7 000 33333 7 0000000000 22 3 777 8 7 7 7 0 0 0 0 22 00 7 7 7 22 7 7777777 22 7 55555 7 55555 3 7 7 7 7 22 7 7 7 7 6 4 9999999 44444 999 4 0000 99 7 7 99 3 11111111 99 1111 3 7 1111 4 7 444 0 7 000 4 7 0 0 0 0 888888 55555555555 2 0 4 0 11 0 99 0 888 888 444444 99999 0 888 7 333333333333 7 7 11111111111 7 44444444444 99 6666 7 999999 33333 4444444444444 1111 7 7 0 0 00 7 7 44 7 7 7 99 99 0 7 7 7 11111 0
consensus : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GG-GTTT-GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T--NTT---TTTAA-TG-GC--GT----TGT--C-T-T-GGTG-CTGAAT-ATTACGGACTAGCA-TTTA--CGTTATATAAT-GC-C-AG-AAGAACGAC-T-C--------TGTTGAAG-AAA----AGGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAA-GCTTGG-TG--TAATGGGAA---CACA-GCGGAGCCGATGAT-A--CT--ATTCT-C-GTC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGGGGG-GAAC--TCAGCCCTACCTCA-CAGCTTT-CA-CG-CTTGACTT-CACAGGC-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CC-CGAATCCA-TA-C-TAATAA-CCGATTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAGCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAG--AT-CCGTC-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ATTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCCGTTTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTG-GC-TT-GCATG--TATGCTATGA--TGG-GTTTTTTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTTGCCATTATGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-T--A-----TATCAGAATCATTCACACAATGCG-TTA-AGACA-TCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGT--A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACCT-ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTNCGACCACTT---------------CACT------TTCAGTTCCAAAGCCACAACATATTCATGGNAAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CCGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGATTATT-AC-ATATA-TT-ATTG-CCATATT-TTATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTNGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGTCG--GCTTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTTAA-T--GC--ATTGG--N-GCAGCT-AC----TACCCTTG-C-A-CAGCAAGGCATT-GC--AAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---GAGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCCTT-GCGTATTTA-T-T---T---ATA--GCA---NA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-CACA-G-CAA-GGG--GCTGCCAGATC-CA-GGACA---G-GGGGACCAGACCTNATTAA
Reference ( family-719 ) : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GG-GTTT-GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T--NTT---TTTAA-TG-GC--GT----TGT--C-T-T-GGTG-CTGAAT-ATTACGGACTAGCA-TTTA--CGTTATATAAT-GC-C-AG-AAGAACGAC-T-C--------TGTTGAAG-AAA----AGGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAA-GCTTGG-TG--TAATGGGAA---CACA-GCGGAGCCGATGAT-A--CT--ATTCT-C-GTC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGGGGG-GAAC--TCAGCCCTACCTCA-CAGCTTT-CA-CG-CTTGACTT-CACAGGC-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CC-CGAATCCA-TA-C-TAATAA-CCGATTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAGCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAG--AT-CNGTC-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ATTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCCGTTTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTG-GC-TT-GCATG--TATGCTATGA--TGG-GTTTTTTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTTGCCATTATGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-T--A-----TATCAGAATCATTCACACAATGCG-TTA-AGACA-TCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGT--A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACCT-ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTNCGACCACTT---------------CACT------TTCAGTTCCAAAGCCACAACATATTCATGGNAAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CCGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGATTATT-AC-ATATA-TT-ATTG-CCATATT-TTATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTNGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGTCG--GCTTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTTAA-T--GC--ATTGG--N-GCAGCT-AC----TACCCTTG-C-A-CAGCAAGGCATT-GC--AAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---GAGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCCTT-GCGTATTTA-T-T---T---ATA--GCA---NA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-CACA-G-CAA-GGG--GCTGCCAGATC-CA-GGACA---G-GGGGACCAGACCTNATTAA
gi|1 : CGCATATT--TAG-C-TTGTCTAGCAATATG--CCCG-CCATT--AATAT-CTCCGGA---------ACTT---GTTCTCAT--GTCCTT-GTTG-TT-A--TT-ATGAA-AAAGG-GGG--GA-GTTTTATGTGTGGCCCATTCT--AT-TATTCCGCG--AA--AGTTGTCATT-CCG-C-ATTG-TTCGA----AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGGCCTAAT-AC-G-T-CAC---GAA-TCATGTGCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGCCCAGTG---TACAATTAC-G--GCCAGGGAAAACTCTGTAATGTCCTTTGC-A-TCAACTTGAAA-ATCTGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T---TT---TTTAA-TG-GC--GT----TGT--C-C-T-GGTG-CTGAATTATTACG-ACTAGC--TTTA--CGTTATATAAT-GC-CCAG-AAGAACGAC-T-C--------TGTTGAAA-GAA------GGGGAAGGGCGTTC-AC-G-C-T-CTAA---ACAGTCTCCC-ACGCCACAAC-CTGGAC-AAGAGGAC-AAA-GCTTGG-TGCTTAATGCGAAACACACA-GCGGAACCGATGAT----CT--ATTCT-C-ATC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGCGGGCGGAC--TCAGCCCTACCTCAACAGCTTTTCA-CA-CTTGACTTTCACAGGC-TGGCGC-ATCGCA-TC-CCG-T-AGTTGAA-GCGT--CCGCAAATCCA-TA-C-TAATAA-CCAATTCTTCGCGTAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCACAAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---GATGCATCA-ATTC-A-ATATGGCCC-CA--TGTTGCGCATTATT-CG--TGAATTCATAAC-CATGTTCA-TTCTA-TCATAGCCCACATTAGCCTACGTTGCCTGGTTTTGCCTG-ACATA-TA-TGCTCAG--ATACCGTC-AATTCACTCGC-GCCTGACAA-A--TTTA-CCAAATAG-GTTCAGCATAACTTAAAACAACCACTGAAA--------ACAAA-CCA-TCTTAGCCATTT-AGCCCTGGA-CGGATGCCCATTTCATAATACTA--TCTTACAT-GCATATAGGTTTGC-TGCTCAATTCATAGACAAATCAACTTTACATCTCA--AATAC-TTAAAG---GGC-G--GGGGGGGAGGGGATGCAGAAAAAGTCACAGGG-CT--TC--A--TTA-TGGCTAGCACTA-----TCTGTA-ACATTTGG-CAACACAGCACCTTAAGGCATTTGCTTTTTTTTT-AACTACAATGGGTCTTGCTATA-ATTCGCTGTGAGGTAT--CATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGAGGTCAAGCAGG------TGGGCCG------CCCAA-CAACACAACAATTATAAAACTTTTGGGCAGCGGGGGGATTCATAACGTAGGGTACATGAATCAATTTC-TCCTGGTTTAGTGCTGGTTAACCCTGCTGATTCTAAACTTCCA-TTTAAA-ACATGTAACAG-TTTTTATCATTGACACTGGTATTGAT-GTTGCGTTTGTG-TTATTT--TGCGACT----TTCTGAATTAACTTTTCTGCCCCCCAATGATTC-TTG-GCCTT-ACATG--TATGC---AA--TGG-GTTTTTAAT-TGACACTGACAGTAACTG-TCAACTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATGCTT--TATCA-TTTTCGCGGTTGGC-TAGTCATGGCCCAAATCACTGATTGACAT-GTTTCATTACT-TGGGCCGATTTTTAAATTCGC-AGCCA-T-GTGGATAGCCAGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAAAT-GTGGG-TGGTG-ATGC-TAGATCTTTCAA-CCA--TG-AC--ATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCCATCA-TTT--AGA-TTGACACTAATCAATATTTTGCCAGTATGATAAAACCTTTGCCGGAAGGAATTTTTAGA-----GTC--AAGGAAC--TTC----GA-TCT-GATCTTCAGAGCCTGGTGGGCAAGCCACTAAATGTTTTTTA-CAAAG-C-AT-TTCT--GCA-GC-GGG-GCGCTTCAGTTCGATTGATTTTA-GACATACACGGTT-GCGCTCCATAAGCCA-TCA-AA-T--------TATCAGAATCATTCACACAA-GCG-TTA-AGA-A-TCAATACCATA-ATCAAGTTTTTAAGAAGGCGGC-TT----------AATGT-TGTGTATTT-TT--C-TGCTTTAGTGAG-T-GA------TTCA--TAT--ACCG-G----T-GCTGGTGGATTTAGC-TTACT-GGTTGC-GAGCTGTTATTTT-CATGCCCGTCAATG--GACCTAACTTTCAGT-GCCACAAAA-TTGGG-TC-TCATTTTCAATCTTAAAACACC-TC-A----ATACAT-TCTTTAGAACTTGCCGA-CC-CATTGCT-GC-AGC---ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATATTTTCA-GTGTGCCGAATATGGCCTTAGTACACATT-TT-AACA----GATCAT-CTAACTCACATCGCG-TTATGCT-GT-CTGTTGCGACCAC---------------------------TTCAGTTCCAAAGCCACAACATATTCATGGGAAAAC-AAT-A--T-CACTG---TTTCTATAGCTTA-CAAC-CAGTGGCGCTC----TCCTTCAG-CCAGCTGG-CCGCCT-A-GCCCCAGC-GT----ACAGC-CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AG-C-TCATTCAGA-GCGCAGCTTTTTTTCAT--GTGTAATAGGAC----TATTACTATTC-TCAC---GTA-AGCAT-ACACCAAATCAG-GC-AATACAGTGGCCTTTTCAAGCC-TTCTCTTACACATAT--CACACTGGATTATT-AC-ATATA-TT--TTGCCCATATT-TTATTCATACAAGCGATACAATA--------AATT--CAGTT-AAGCCCCTTACATTTTCTGCGATTAGTTTTTCAT-GGAAGACAG-TCAATTAGGAATCGGCA-CTATACGCGTCGGGCTACC-AGCAG-GT-CAGGTAATAACC--TCCAC-TA-------CA-GC--CAGTTACAATT-AC---C-T-GG-GGGTTTTGATCACATGAAGA-GGGCAACATATTTTGTCACTTC-CATCG-CCT--GTCCC-CTTAC-TAGTTGCCAGCTTACTTCGGTACTGCCC-C--GGTTAGCGCTTAA-TTAGGT-GGATAG-ACTGTTCAGGCCATTTC-AA--TCCCACTCTTTAA-T--GCCAATTGG--G-GCAGCT-AC----TACCCTTG-CTA-CAGCAACGCATT-GCTTAAAT-AAGTTATTCAAGCGCC-AGCG-T-CAATGGCCGAAATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCTTTCGCGTATTTA-------T---ATA--GCC---AA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGT--TC-GGAGCCTCCATTAAAAACAGCCACA-G-CAATGCG--GCTGCCAGATC-CA-GGACAAGGG-GGGGACCAGACCTCATTAA
gi|10 : GAGGAC-AAA--CTAGG-TG--TAATGGGA----CACA-GCGGAGC-GATGGT-A--CT--AATCT-C-A-C-TAG-ACACTCGTCCA-GTA-CAGTCC-ATGGGGG---------AGTCC-AGCGTA-CAGCT---CA--G-CTCAACTC-CAGAG-C-TGG-----T-GCA-GC-CCG-T-GCTTGAA--TCCGTCC-CTAATAGC-TA---TAATAA-CCAACTCT---CGGAGCCGAGTACA----ATA-------------------------------------TGCA-AAATAATTATA--TTTTTCAGGGCC--CACAAC-CA-ATACACA-T---AATG-ATCA-ATTCTA-ATCTGGTCC-CA--T--TG-GCAT-ATCATG--T----TGATAAC-CATGTCCA-TTCTAAGCATAAAT-ATATTAGT-TACATTGC-TGGTT---CGTG-ACATA-CA--G-TCAG---T-CGGTC-A----------------ACAA-AAGTTGG-CCAAAT-T-GTT--GCATAACTTAAA-CA-------------------------C--T---AGC-ATTG-AACTCTGGA-TGGATGT--ATTTCATA-TATCA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATAGACAACTCAA---TA-ATCTTA--ATTATAT-AAAATTCGAC-T--GGGGGA---------CAGAAAA-TTCACAGGG-TTGGTCAAA--TTA-TGGCGAGCACTAAGTCTTTTGTTTACATTTGG-CAAC
gi|11 : CGCATATT-CTAGCC-TTGTCTAGCA--ATG--C--G-C-ATTTAT-CCT-CTCCGGGTTTTATTTTACTCGGAATTCTCA-T-ATCC-TTGTTG-TT-A--TT-ATGAACAAAGG-GGGGTGG-GGTT-GT-TGTTGCCCATTC---AT-TATTCCG-G--AA--AGTT-TCATT-CCG-CAATGG-TTCGA-TAGATTGTG-TT-A-ACATTTTACTTAG---TC--TTTT-------ATG--TGATAACGG-T-CACAGGAAA-TCATTTCCTCGAC--ATGCTCCGAA-GCC-ATTGT-GCT--GGT----TACAATTAC-GT-ACCAGGGAAAACCCTGTAATGTC-TTTGC-A-TAAACTTGAAA-AT-TGTTG--ATAATT-T--TAC-C-C--TG-GA-TT-AACT----T--GTT---TTTAA-TG-GCT-GT----TGC--C-T-TGGGTG-CTGA---ATTA-GGACT-GCA-TTTA--CGTTAT-TAAT-GC-A-AG-A--GACGAC-T-C--------TGTTGAAG-AAA----AGGGGTGGGGGCGTTCCAC-G-C-TCCTAA---ACAATCTCCC--CGC-ATAAC-CTGGAC-TAGAGGAC-AAA-ACGTGGTTG--T-AT-GGAA---CACA-GCGG-GACGATGAT-AACTT--TTTCTCC-GTC-TAG-A-CTTCAT
gi|12 : ttatT--AATCT-C--TC-TAA-ACCTTCGTCCA-GTA-TATCCC-ATGGAGG--AAC--CCAGCCC-ACCGCT-AAGCT---CAACA-CT-AACAC-CACAG-C-TGG-----T-GAA-GC-CCG-T-GCTTGAA--------------TCCG-TA-CCTAATAA-CCAACTTT---CGTAGCCGAGTACAGGTAATGCACTGTTCGTTATCTTTGCCTTCA-CAC-AACAACG-TGCA-AAATGATTATA--TTTCTCAGGGCC--CACAAA-CA-TTACACG-T---AATA-ATCA-ATTC-AGATATCGCCC-CA--T--TG-GCAT-AT------------------------CCA-TTCTAAGCATAAAT-ATATTAGC-TACATTGC-TGATT---CGTG-ACATAGTAATGCTCAGTTAG-CTTCC-A-TTCACTCG--G---T-CAACA--TTTGGCCAAAT-T-GTT--GCATAACTCAAA-CAATCA-----A--------ACAAAACCA-C-----T-AT----------------ATGC--ATTTCATA-TATTA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATTGACAACTCA-----ACAATTTA--A--AG-T-AAAGTTCGACTGGTGGGGGG---------CAGAAAT-GTCACAGGGTTT-GTC--AACTTA-TGGCGAGCACT------TCCATTTACATTTGG-CAAC
gi|13 : G--TACCT-GCATTGT-CAGGT-ATAACC--TCCAC-TAGGCACTACAGGC--CAGTTGCAATT-ACATGCAT-GGTGGG-TTGAATCACATGAAGAGGGGCAAT-TATTTTGTCACTTC-CA-CG-CCTCTGT-CCATTTAC-TAGTTGCCAGTCTACT-CAGTACTG-CC-CCGGGTTG--G-TTAATTTAGGTGGGATAG-CCTGT--AGA-CATTCA-AA--TCCCA-TCTCT-------C--ATTGG--TTGCAGCTTAC----T-CCCTTATC-AGCAGCAAGGCATTTGG--TAAT-AAGTTATTCA-GCGCCCAG-G-TTCAATG---AGGATCGGTC-----------GCGAATCGTC-TAT-A-TAT-C--C-CCC---AG---AT------TGT---T-ATTA-TTT--AATTATTA------------TATTTCA-TAA-----------GGCTT-GCGTATTTA-T-T---TTATATA--GCA---TA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGTTGTC-GG-GCCTCCATTAAAAACAG-CACATG-CAA-GGGCAGC--CCAGATCTCA-GGACA---ACGGGGACCAGACTT
gi|14 : TTA--CGTTATTTAAT-GC---AG-AA--ACGAC-T-C--------TGTTGAAG-AAA----AGGGGGAGGGGCGTT-CACGG-C-T-CTAA---TCAGTCT-CC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAT-ACGTGG-TG--T-AT-AGAA---CACAGGCG--GCCGATGAA-A--CTTAATTCT-CTGTCGTAGAACCTTCAT-TA-GGA-TATCCCAATGGGGG-GAA---TCAG--CTACCTCA-CAGCTTTACA-AG-CTTGACGT-CACA-GC-GGGCGCAAT-GCACTC-CCG-TGGCTTAAG-GTCC--CT-CAAATTCATTA-CTTAATA---CGATTCT---CGGAGCCGAGTACAGGTAATA----------TAT-------TTCG-CACAAAC---G-TGCA-AAATAATTATACTTTTCTCGGGACCCGCACAAA-CATTTGCACA-TTTGAATG-ATCATATTC-A-ATATGttctt
gi|15 : ATATT-TAAG-C-G-GTCTAGCA-T-TG--C--G-C--TT--C-TAT-CTCAGGG----------CT----GTTATTGT--GTTCTTTGTTG-TT-AATTT-ATGAA-AGAGGAGGG--GG-GGGT-GT---TTGCCCATTTTAAATGTATTCGG-T--AA--AATG-TCATT-CCATC-GGGG-TT-GATT--AT--TG-TT-T-AC---TGAGTTTG---TC--TGATGGAGGACGGG---AAT-AC-GTT-CAC---GAA-TCATTTCTTAGAA--AATCTG---G-GAC-A-TCT-------GTG----AGGATTACAGT-G---GCGGAATCGTTGTAATGTA--TTGT-AGTC----TG-AA-AT-TGTTT--A----T-A--TGTCC-T--TGTGA-TTAAAC-----TAAATG---CTTTA-TG-GC--TT----TATTGC-TAT-GGTG-----------AC-GAC-AGAT-TTTATTCGT--TATGAT-G--C-AGTAAGATCGACGTGC--------TGTT-ATG-AAA----GGGGGGG
gi|16 : tatgcaTACTTCCGTACTG-CCAC--GGTCG---CTTAATTTAGCTGGGATAG-ACAGT--AGG-TATTTC-AAAGTCC-ACTCTTTAG----GC--ATTGG--C-ACAGCT-AC----TACTCTTA-C-A-CAGCAAAGCATT-GC--AAATCAAGTTATTCAAGCGGC-AG-G-T-CAATG---AA-ATTGGTC-----------GCGTATCAGT-TAT-AC-AT-T--TGCTA---AG---AT------TGT---T-ATTA-TT---AAT-A--A------------CATT-CA-TAAGCCATTGATACGCCTT-GTGTATTTA-TAT---T---ATATGGCA---TACCAT---A--CATTT-----AT-------------TAAGT----TTTT-CATA-GGTCAAATTAAT-ATCTGGGTTGTC-AGATCCTCCATTATAAAGAG-GACA-G-C-A-GGG--CCTGCCAGATC-CA-GGACA---G-GGGGACCAAACCT
gi|17 : gtgCGCATATTTCTAG-C-TTGTCTAGCA-GATG--C--G-C-ATT--T--AT-CTCCGGA---------ACG----GT-CGCATT-GTCCTTTGTTGGTT-A--TT-ATGAA-AA----GGG--GG-GTTT-GT-TGTTGCCATTTCT--AT-TATTCCG-G--AATGGGGT-TCATTTCCG-C-ATGGATTCGA-T--AT--TG-TT-T-AAATTT-ACTTAG---TC--GTTT-------GGG---AAT-AC-G-T-CAC---GAA-TCATTTC-TCGAACAATTCTGC-AAAGCCGA-TGTTGGC--AGTGG--TACA-TTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAATGT-TGATG--A----T-TG-TA--C-C--TGCGA-TT-AAC-----T--TTTG--TTTAA-TG-GC--GT----TGT--C-C-T--TTGCCTGAAT-A-TACGGACTAt
gi|18 : tatCGCATATT-CTAG-C-T-GTCTAGCA-TATG--C--G-C-ATT--T-ATT-CTCCGGA---------ACG----GT-CTCATT-GTC-TTTGTTG-TTTA--TT-ATGAA-AAAGG-GGG--G----TT-GT-TGTTGCC-ATTCT--AT-ATTTCCG-G--AA--TGTT-CCATT-CCG-G-CTGG-TTCGAAT--AT--TG-TTTA-ACATTT-ACTTAG---TCCTTTTT------CGGG--TAAT-ACCG-T-CAC---GAAATCATTTTCTCGAA--ATTCTGC-AA-GCC---TGT-GGC--AGTG---T-CAATTGC-GT-GCCAGGGAAA-CCCTGTAA-GTC-TTTGC-A-TCAACTTGAAA-AT-TGTTGATA----T-T--TA--C-C--T--GA-TT-AAC-----T--TTG---TTTAA-TGCGC--GT----TGTTCC-T-T-GGTG-CTGAAT-ATTACGGACTA
gi|19 : tatC-AG-GAT-CAATG---GA-ATCGGTTCAGTTCTCTAAGCGAATCGGCCTATTAATAT-CTAC-CCGTAGAG---ATAATGGGTGTATAT-ATTC-TCTACAAT-TTTATTCTATAACGACCCTT-CA-TAA-----------GCTTT-GCGTA-TTA-T-T---T---ATG--ATAGATGA-CATTACAT-CATTCTTCCAATTTCACCACCTTAATAAGTATACTTTTGCACAGGGTCAAATTAATAATa
gi|2 : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--GAC-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AGAGG-GGG--GGAG----GC-TGTTGCCCATTTT--AT-TATTCCG-GATAA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG---------TTTTACTGAG---TC--TTTTTCTGTGCGGG---AAT-AC-G-T-CAC---GAA-TCATTT-CTAGAA--AATCTGG-AA-G-C-A-TGT-TGC--AG-GAATTACAATTGC-GT-GCCA-GGAAAACCCTGTAATGTC-TTTGT-G-TCAACTTGAAA-AT-TGTTAT-A----TGT--TA--C-CTTTG-GATTT-AACTAACAT--GCT---TTT-A-TG-GCTTTT----TGT--CAT-T-GGTG-CTGAAT-ATTACGGACTAGCATTTTA--CGTTAT-CAATGGC-C-AG-AAG-ACGAC-T-C--------TTGTGAAG-AAAAGGTAGGGGGGGGGGCGTTCCAC-A-CTT-CGAAT--ACAGTCTCCCAACGC-ACAACACTGGAC-TAGAGGAC-AAACGTTTGG-TG--TAATTGGAA---CACA-GCGGA-CCGATGATGA--CT--ATTCT-C--TC-TAG-ACCTTTATCTACAGA-TATCCC-ATGGGAG-GAAC--TCGGCCTAACCTCA-CAGCTTA-C--CGTCTTGACTT-CACA-GC-T-GCGC-AT-GCA-TTACCGAT-GCTTGAAGGTTC--CT-CGAATCCA-TAGC-TAATAACCCAATTCT---CGGAG-CGAGTACAGGT-TTAC---------TTA-------TTCGACAC-AAC---GTTGCA-ATA-AAATATA---TTCTCGGGGCC--CACAAACCA-TTGCACATT---GATG-A-CA-ATTC-A-ATATGGCCCACATGT--TG-GC---ATT-CGGTT----TCATAACTTGTGTTCATTTCTATGCATAG-C-ACATTAGC-TTTGTTGC-TGGTT---TGTGCCCATA-TA-TGCTCAG--AT-CCGTCAA-TTCACTCGGTG---GACAA-A--TTTA-CCAAAT-TGGTT--GCATAACTTAAA-CAACCA-----ATCTTGAATACAAA-CCACT---AGC-ATTTAAGCCCTGGACCGGATGC--ATTTCATA-TACTATCT-TTACCATGCATATAGGTT-GCATGCTCA-T--------------A-TTTACATCTCAACATTACTT-AAAG-GCG---G--GGGGGG---------CATAAAA-GTCACAG------GTC--A--TTATTGGCTAGCACT------TCTG-TTACATTTGGCCAACAC-GCACCTTAGGGGCTTTGTTTTTTTTTTTAACTACAATGGGTC-TGCTATAGATTCG-TGT-AGGTATTTCAT-CCACCT--GT-CAATCTAC--------------CGTGGAAA-TGGGGTCAAGGGGGGGGGTGTGGGGGGGGGGAACCCAAACAACAC-ACAA--ATTCAAC-TTTGGGCA---GGGGGGTTCATAACGTA-GGTACATAAATCAATTTCATTTTGG-TTAGTGCT-GTAAACCCTGCTGATTCTAAACTTCC-ATTTAAATA-ATGTAACAGTTTTTTA-CATTTACACTGCTTTTGATGGT-G-GTCTGTGTTTATTTCCT--GGCTATGATTCTGAATTAAC--T-CTG--CCT-AATGATTCTTTGTGC-TTGGCATGACTATCTTATGATTTGGTATTTTGTAT-TGACACTGACAGTAACTGTTCA-CTGTT-CATTTTG--TGTGCTA-TTCATG-CATAAA--TTTGAATG-TT--TATCA-TTTTCG-GGT-GGCTTAGTCATGGCAT-AATCACTGATTGA-AT-GTTTCATTA-T-TGGGC-AATT----------------A-T-GTG-----------------ATCTTC-TTATGCAT-AC-TTTCA-GACTAATGTAATT-GTGGG-TGGTG-AT-G-TAGATCTTTCAA-CCATTTG-AC-AATCTGTTCAT-----TC--CTACACAT-CTA--G-ATACA-TATCC-TCATTTT--ACATTTGACACTAATCAATA-TTTGC--TTAT--TGATACCTT----GG--GAA---TTTAGG-----GTC--AAGGAACT-TTCT---GA-TCTGGATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-CTAG-TTCT-GGCAGGC-GGGTGCG-TTCATTTCG-TAGATGTTACAACAT-CACGGTT---G-TCC-T-AGCCACTCA-CACT--ATTAATTATCAGAATCATTCACACAATGCGTTTA-AGACA-TCAATACC-TACGTCAAG-TTTTAAGAAGGCGGCTTT----------AATGT-TGTGTATTTCTT--CTTG--TTAGTGAGTTGGA------TTCA--TG---A-CGCG----TCGCTGGTGGATTTAGCTTTA---GGTGGC-GAG-TGTTACTTT-CA
gi|20 : atatAAT-GC-C-GG-AG--ACGAAAT-C--------TGTTGAAGAAAA----AGGGGGGAGGGCAAT-CAC-G-C-T-AAAAAGCACAGTCTCCC-ACGC----AC-C---ATATCGAAGAC-AAA--CTAGG-TG--TGTTGGG-A---CACA-GCGGAG-CGATGGC-A--CT--AATCT-C--TC-Tt
gi|21 : aagTTGTC-AGATCCTCCATTATAAAGAG-GACA-GTCAA-AGG--G-TGCCA-ATC-CA-G--CA---GCGGGGACCAGACTTAAT
gi|3 : ATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTT-A--ATTTACACT--TCTTGAT-GT-G-GT----G-TTATTTCCTGCAG-----ATTCTGAAT-AACTT--CTGCC----AATGATTC-TTG-GC-TT-GCATA--CATG-TATGA--TGG-GTTTTTTATATGACACTG-------------------TACATTTTGGTTGTGCTATTTCATGC-ATCAATTTTGAAATG-TT---ATCA-TTTTCG-GGT-GGC-TAGTCATG---CAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTT-AATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-T-ATGCAT-ACATTTCA-GACTAATGTAATT--TGGG-TGGTG-ATG--TAGATCTTTCAA-CCA--TG-ACCATACTGTTCATT----CC--CTACACAT-CTA--GCATA-AT-ATCC-TCA-TTT--TAA-T-GACACTAATCAATA-TT-GC-ATTATGATA---CCTT----GG--GAAATTT--AGG-------C--AAGGAAC--T-CT---GA-TCT-GATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-ATATTCTGG-CA--C-GGG-GCG-TTCATT-CG-TG----TTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-C--A-----TATCAGAATCAT---CACAATGCG-TTA-AGACA-TCAATAC--TA-GTCAAGTTTT-AAGAAGG-GGC-TT----------AATGT-TGTGATTTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGTT-A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-TCAG---GTCAATG--GAC-T-ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCA---TTTAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T--CTAGC-T-ATATT----------CTCTA-----GGG-GTTGTAGGAGGC------------ATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTGGTACACATT-TTTAACA----G-TCATACT------CATCGG--TTATGTG-GT-CTGTTG-GACCACTT---------------CA------------GTTC-AAAGC-ACAACATATTCATGG-AAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CC--CT-A-G---CAGC-GT----ACAG--CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCAT-CAGA-G-GCAGCTTTTT--CAT--GTGTAATA-GAC-----ATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTTTTCA--CCTTTCTCTTA-ACATAT--CACACTGGGT-AT--AC-ATATAATT-ATTG-C-ATATT-T-ATTCATACAAG-GATACAA-T--------AATC--CAGTT-AAG---C-TACA-TTTCTGCTATTAG-TTTTCAT-G-AAGACAGTTCAATTAGGAATCGGCAACTATAC-TGTCGG--TACCTTGCAT-GTTCAGGT-ATAACC--TCCACATA-------CAGGC--CAGTTACA-TT-AC---C-T-GG-G---TTTGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-C-T--GT-CC-CTTAC-TAGTTGCC-GCTTACTTCAGTACTG-CC----GGTTG--GTTTAATTTAGG-GGGATAGTAC-GT--AGG-CATTCC-AA-----CA-TCTT-AA-T--GC--ATTTG--G-GCAGCT-ACATACTACCCTTG-C-A-CAGCAAGGCATT-GC--TAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---G-GATCGGTC-----------G-GAATCGGC-TAT-A-TAT-C--C-CCA---AG---AT------TG----T-ATTATTT---AAT-ATTA------------CATT-CA-TAA-----------GCTTT-GCGTATTTATT-T---T---ATA--GCA---TA-CAT---A--CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC--GAGCCTCCATTAAAAACAG-CACA-G-CAA--GG--GCTGCCAGATC-CA-GGACA---A-GGGGACCAGACCTCATTAA
gi|4 : TAAATG-TTATCATCAATTTTAG-AGT-GGT-T-GTCATTGCA-AAATCAGTGATTGA-ATCGTTTCATTA-CATAGGC-GATTTC-ATTTTTGC-AGACAGT-ATGTATATC-AGCCATTGTGATCT----TATGCAT-ACATTTCA-GTCTA-TGTCATT-GTGTG-TTGAG-ATGGGTATACCTTTGAA-CCA--TG-ACAAATCTGTTTAA-----CCTGCTACATGT-TTA------ACATT-TCT-TCG-TTTGGAGA-TTGACACTAATCAATA-TT---CAT-ATGAGAATACCTT----GG--GAAATTT---AG-----GTC--AAGGAAC--TTCT---GAATCT-GATCTTCAGTGCCTGGTGGGCAAG---ATAAATGTTTTTAG-CAAAGCC-AT-TTCT-GGCA-GC-AGG-GCG-TTCAGTT-G-TAGATTTTACAACGC-CAGGATT-G-G-ACT-TAAGCCA-TCA-CA-TC-A-----TATCAGAATCATTTACATAATGCG-TTA-AGACA-TAAATA-CATG-GTTAAGGTTTT-AGAAGG-GAT-TTTTATTGGTNNNNNNN-NNNNNNNNN-NN--N-NN--NNNNNNNN-NNGAACCCCCTGCAACTGTTCA-CG-GACAGT-GCTGTTTGATATAGC-CTA---GGTTGC-TCG-TGTTATTTT-AAAG---GTCAATG--GGCCT-AGTTTCAGTGGCCACAAAA-TGGGG-TCTTTAC-TTCAATCTTAAAG-ACA-TT-A----TTACGT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-GTT-T----------CAGTA----TGGG-GTTGTAGAAGGC-----------AA-AACATAA--C-ATATA-TTTCATGTGTGC--AATATGACATTCTTA-ACA------AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-ATGTTA-GACCACTTATCATTGTGTCTTTACACTCAAATATTCAGTT-CAAAG-CACAACATATCCCTGACAAAACGAATAAATT-C-CTG---ATTCTACATCTTG-CAAA-CAGTAG-A-TT----TTGTTCAG-GCAGCTGG--TGCCT-A-G---CGGC-CT----ACAG--CAGACCAT-AAC---CCT-CAGC---TTA-TCC-T----AGCT-TCATTCAGG-G-GCAGC--TATTTCAA--GTGT--TA-CAT----T-TTA----TCGT--T---GTA-AGGAA-ACACCAAAG-AA-GCATATACAGTGG-CTATTCAGGTATTTCCCCTA-ACACAT--GACACTGGA-TATT-ACAATACATTT-ATTG--CATA-T-TTATTCATACATG-GATACGAGT--------AATC--CAGCTAAAA---CATACA-TTTCTGCAATTAG-TTTTCAT-TGAATACATATCTATTAGGAATCGGCA-CCATAC-TGTCGG--TACTAAGCAT-GT-TAGGA-ATAATTTGTCCAG-TT-------CAGGC--CAGGGATAATT-AC---A-TGGG-GGG-TTCGATCACAGAAAGCGGGATAAC-TATTTTGTCACTTCTCA-GT-TCC--G--CT-CTTAA-TCGTTGCCAGTTTATTCCCGTACTG-TCAC--GGTC---GCTTAGTTTAGCTGGGATAA-ACAGT--AGG-TATTTCAAA--TCCCACTCTTT-A-T--GC--ATTGG--C-GCAGCT-AC----TACGCTTG-C-A-CAGTAAGGCATG-GA--AAATCAAGTTATTCAAACGGT-AA-G-T-CGAT----GAGATCGGTC-----------GCGAATCAGT-TTT-AC-AT-C--CGTTA---AG---AT------TGT---T-AT----------T-ATTA------------CATT-TA-TAA-----------ACCTT-GTGTATTTA-TATTG-T---ATA--GCA---AA-CGT---AA-CGTTC-----AT-------------TAAAT----TTTT-CACA-GGTAAAATTCAT-ATCTGGGTTGTC-AGATCCTCCATCAAAAAGAG-AACA-G-CTA--GG--GCTGCAATATC-CA-GGACA---G-GGAGACCAGACCa
gi|5 : --TTCT---GA-TCT-GATCT-CAGAGCT--GCGGGCAAGT--CTAAAT---TTTTAGCAACC-T-AT-TTCTGG-CA-GC-AGG-GCG-TTCATT-CG-ATGATTT-ACAACA--CACTGTT------TC-TAAGCCA-TCA-CA-TCTA-----TATATGTATCATTCACACAATGC--TTAGAGACA-TCA-TAC-ATA--TCAA---TTTAAGAAGG-G-C-TT----------AATGTGTGTGTATTT-TT--C-TG--TTAGTG-G-TG-A------TTC---TG---A-CA-G----------GTGGATT-------A---GGTTGCCGAG-TGTTATTT--CATG---GTCGATG--GAC-T-ACTTCGAG---CTACAAAAGTTGGGGTCTTC-CTTTCA---------CACC-TCGA----ATACATCT-TTTAGA-CTTGT--AGCC-CATTG-T-GTTAGCCT-AT-AT----------C-CTA----TGGGCGTTGTAG----------------CATGGC-TAG--C-AT-TA-T---ATACATGC--AATATGGCCTTTGAACA---------ACA------------TAAACCAC---GGT-TTATGTAAGTACTGGTTTGATC-------------------CACT------T-CAGTTCCAAAGACACA-------CA-GGAAAACC-AATAA--TAC-CTG---TTTCTATAGCTTA-ACACACAGTGG-GGTCCAACTCCTTCAGACTGACTGGACCGCCTCATG---CAGCCGTCACTACAT--CATAACAC-AACACACCT-CAGCGACTAC-TCAAT----AGCC-TCAT-AAGA-G-GCAGCTTCTTTTCAT--GTGTAATA-GACG---TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTCTTCAAGCATTTCTCTTA-ACAAAT--CACACAGGATAAA--AC-ATATA-TTGATTG-C-ATATT---GTTCATACAAG-GATACAAATATTGAAATAATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTGGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTTGATCACATAAGGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGTCGGCTTACTTCAGTACGGCCC-C--GGTTG--G-TTAATTTAGGTGGGA---------------CATTCC-AA--TCCCACTC-TTAA-TGAGC--ATTGGCTG-GCA-CT-AC----TCACCTTG-C---CAGCAA-GCATT-GCT-AAAT-AACTTATTCAAGC-CC-AA-A-T-CAATG---GA-ATC-GTCAGA--------GCGA--TGTC-T-T-ACTATAT--C-CCA---AGC--AT------TGT---TCATTA-TT---
gi|6 : ccaGGGC-G-CTTTTAATTTCGCTAGCCA-TTGTGGATAGC-AGCAATGGTGATCTCCCTTATGCATGACATT-CATGACTAATGTAATTTGTGGGGTGGTGGATAG-CGAATCTTTCAAACCA--TGGACAAATCTGTTCATAGTTCCC--CTACACATGCTAAGGCATGCAT-ATCC-TCA-TTTT-AGA-TTGACACTA-TCA-TA-TTTGC-ATTATGA--ATACCTT----GG--GGAAATTTTAGGTCAAGGTCTTAAGGAAC--TTCCTGAGA-TCT-GATCTT-AGAGCCTGGTGG-CAAG---CTAA-TGTTTTT-A-CAAAA-CCAT-TTCTG--CA-GCAGGG-GCG-TTC-TTTCG-TTGATTT-ATAACAT-CACGGTTTG-G-TCC-TAAGCCA-TCAACACT--A-----TATCAGAATCCATCACACAATGCG-TTA-AGACAATCAATAC-ATA--TCAGGTTTTAAGAAAGG-GGC-CT----------AATGT-TGTGTATTT-TTTTC-TG--TTAGTGCG-TGGA------TTCG--TAT--A-CG-G----T-GCTGGTGGATTTAGC-TTACTAGGTTGC-GAG-TGTTATTTTTCAGG---GTCAATGTGGACCTGAATTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTC-ATCTTAATACACCATC-AATTTATACA--T-TTTAG-ACTTGT--A-CCGCATTG-TGGTTAGC-TAATCA-----------CTCTA----TGGG-G-TGTTGGAGG------------CATGGC-TAG--CAATATATTTTCATGTGTGCA-AATATGGCCTTGGTACACATT-TTAAACA----G-TCAT--------ATATCGGGTTTATGT--GT-CTGGTTTGACCACTT----------------------------AGTT-CAAAG-CACAACATATTCATTGG-ACAC-CATAA--TAC-CTGTTCTTTCTTAAGCTTA-CAACGCAGT-G-G-TC----TCCTTCAG-CCCACTGG--CGCCT-A-G---CAGC-GT----ACAGCACAGAACAC-AAC---CCTGCAGCT--TACTTCA-TGCAGAGCC-TCA-CCAGAGG-GCAGC--TTTTTCATTGGTGTAAT
gi|7 : AAACC-AATAA--TTC-CTG---TTTCTATAGCTTAACAAC-CAGTGG---TC----TC-TTCAG-CCAGCTG---CGCCT-A-G---CAGC--T----ACAG--CA-AACACTAAC---CCT-CAGC---TAA-TCA-T----AGCCCTCATC--GA-G--CAGCTTTT---CAT--GTGTAATA-GAC----TAT-ACAATTC-T--C---GAAGAGCATTACACCAAAT-AAAGCAAATACAG-GG-CA--TCAAGCCTTTCTCTTA-ACATAT--CACAC-GAATTACC-A----ATA-TT-AT-G-C---ATCATTATTCATACAAG-ATTACAAAT--------AATC--CATTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCATCGGAAGACAGTTTCATTAGGAATCC-CA-CTATAC-TGTC----TACCTCGGAC-AG-TAAGT-ATAACC--TCCAC-TA-------CAGGTTTCA-TTACAATTCAC---C-T-GG-T---TTGGATCACATGAAGAGGGACAAC-TATTAT-TCACTTC-CA-CGGCCT--GT-CC-CTTACCTAGTTGCCAGCT--------TACT----------TCA--G--TAAT-----------------GT--AGG-CATTCC-AA--TCCCACTCT--AACT--GC--ATTGG----GCA-CT-AC----TACCCTTG-C-A-CAGCAAGGCA-T-GC---AAT-AAG-TA-TCAAGCCCC-AG-G-T-CAA-----GA---CGGTC------------CGAATC-GC-TA--A-TAT-C--C-CCA---AGTAAAT------T-T------TTA-TT---AAT-ATTA------------CATT-CATTAG-----------GCTTT-GGGTATTTA-T-TTACT---ATA--GCA----A-CAT---ACACACTC-----AT-------------TAAGT----TTTT-CACA--GTCAATTTAATAATCT-GCTTGTCTAGAGCCT-CATTAAAAACAG-CACA-G-CA---GG--GC-GCC-GATC-CATGGACA-----AGGGACCAGACCTAATTAA
gi|8 : CGCATATT-CT-G-CATTGTC--GC--TATGTCC--G-C-ATT--T--ATGCCCTGGA---------ACT----GTCCTCATTCGTCCTT-GTTG-TTTA--TTTATGAA-AAAGG-GGG------TTG-GT-TGTTGCCCATTCT--AT-TATTCC--G--AA--AGTT-TCA-T-CCG-C-AT-G-TTCGA-T--AT--TGTTT-ATACATTTTACTTAGCGTTT--TTTT------T--A--TGAT-AC-G-TCCAC---GAA-TCATT--CTCGAA--AT----C-A----C-A-CGG-GGA--A-------AC-ATTAC-GTGGCCAGGT-AAACCCT-TAATGTC-TTTGCGA-TCAACTTGAAA-AT-TG-TG--A----TATTGTA--CTC--TG-GATTT-AAC-----T--TTTGCCCTTAATTA-AC--ACAAAATG-------T-G--G-CTGAAT-A--A-GAGCGAG-----TA--CGTATTAT-AT-GCGC-AG-A--AACGAC-T-CCCACACCGCGGCGCGC-CGA----AGGGGGGGGG----TTCAC-GAC-T-CT-A---ACAG---CCC-ACGC-ATAAC-CT-GAC-T--AGGACAAAA-G--TAG-TG--T-ACGTGAA---CA-A-GGGGA--CGAT-AT-A--CT--ATTAT-C--TC-AA------TCATCCA-GGATTATCCC-AATGGGG-GAACTTTCAGCCCTACCTCA-CAACACT-TA-CA-CTTGACTTCCACTGGCGCGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CCTCGAA-CCA-TT-C-TGAT---CTGA-TCT---CAGAGCTGCGGGCAAGT
gi|8 : atatttGAACCATTCT---GA-TCT-GATC-TCAGAGCT--GCGGGCAAGT--CTAAATTTTTctaaatttttagc
gi|9 : atatttcgcatattctgcattgtcgctatgtccgcatttatgccctggaactgtcctcattcgtccttgttgtttatttatgaaaaagggggttggttgttgcccattctattattccgaaagtttcatccgcatgttcgatattgtttatacattttacttagcgttttttttatgatacgtccacgaatcattctcgaaatcacacggggaaacattacgtggccaggtaaacccttaatgtctttgcgatcaacttgaaaattgtgatattgtactctggatttaacttttgcccttaattaacacaaaatgtggctgaataagagcgagtacgtattatatgcgcagaaacgactcccacaccgcggcgcgccgaagggggggggttcacgactctaacagcccacgcataacctgactaggacaaaagtagtgtacgtgaacaaggggacgatatactattatctcaatcatccaggattatcccaatgggggaactttcagccctacctcacaacacttacacttgacttccactggcgcggcgcatgcatcccgtgcttgaagtcccctcTACAT-T-TTTAGACCTTGT--A-CC-CATTG-T-GCTAGC-T-ATTGTAGGAGTGGGATTGTAGGAGTGGG-ATTGTAGGAGGCAAAACAAAAAACAAAAC-AAAAAC-ATATA-TTTCATGTGTGC--AATATGGCCTTAGTACGCATTCTT-AACAAAGAG-TAAT-CTAAATCACATCAGA-TTATGTG-GT-CTGTTA-GACCACTTATCATTGTGTCTCTACACTCAAATATTCAGTTC-AAAGC-ACAACATATCCCAGGTAAACC-AATAAATT-C-CTG---ATTCTATATCTTG-CAAA-CAGTGG-G-TC----TCGTTAAG-GCAGCTG--TTGCTT-A-G---CGGC-CT----ACAG--CAGACCAC-GAC---CCT-CAGC---TAC-TCC-T----AGCT-TCATTCAAA-G-GCTGC--TTTTTCAA--GTGTAATA-GACCATTTATTACAATTG-T--CGTTGTA-AGTAA-GCACTAAAG-AA-GCATACACAGTGG-CTATTCAGGCCTTTCCCCTA-ACATATGGC-CACTGAA-TATTGACAATACATTT-ATTG--TACA-C-TTATCCATACATG-AATACAAAC--------AATCCACAGCTAAAA---CATACA-TCTCTGCTATTTG-TTTTCAT-agc
Alignments
lowQualScore : 11111111111111111111111111111
lowQualScore : 22222 2222222222222222 11 1 2222222222 1111 111 111 4444444444444 1 111 22222222222222 222222222222 11 1 1 33333333333333 22222222222222222 222 1 111 222 1 22222222 11111 111 1111 1 111 111 1111 22 1111111 1 333333333 1 11 1111 2222222222 111 111 66666666666666666666 11111 111 11 111 1 11111 1 111 44444444444 111 1 111 1 1 111 1 1 11 22222 1111 44444444 1111 1 111 11 1 66666666666666666666666666666666 111 11 11 1 1111 1 1 1 111 2222 2222222222 2222222222 444444444 1 22222 11111 1 444444 1 1 1 1 1 1 1 11 1 11 1 55555555555555 1 222222 222222 1 1 11 1 222 1 1 1 1 11 1 22 33 1 111 1 1 333333 2222 222222 1 1 1 1 11 22222222 1 1 22222 11 1 222 1 1 1 1 111 1 1 111 1 111 11 1 22222 11 1111 111 11 2222 1111 11 11 22222 11 11 1111 222 1 222 22222 3333333333 111111 1 2222222222 111111 111 222 222222 222 111 11 111 111 1111 111 4444444444444 1111 3333333333333 1 11 222222 111111 1111111 11 11 22 44444444444444444444444444444 11 11 2222 111 1 111 1111 222 111 1111111 11 111 111 1111 11 11 2222 111111 11 11111 2 333 11111 2222222222 1 111 11 2222222 11111 11111 2222222 22222 2222 11111111 2222 1111 111 1 111111 33333333333 11 1 111 111111 11111 111 222222222222 22222222222 22222222222 1111 111111 11111 3333333333333 1111 1 11 11 22222
lowQualScore : 5 5 5 5 77 77 77 5 5 11111 5 6666666666666666 7 00 5 5 1 77 5 5 5 0000000000 5 0 77 5 5 77 77 5 5 5 5 0 5 7777 77 5 333 1 8 000 77 8888888888888 5 1 5 5 000 5 6 77 1 66666 4 999 33333333333333 0 5 5 0 1 5 5 5 5 5 1 777777777777 33 5 77 1 1 5 22222222222222 1 5 5 11111111111111111 5 0 5 1 888 4 1 333 99 3 1 0 5 222 5 555 1 5 00000000 5 22222 9 6 6 6 6 888 6 6 6 2 6 3 5 5555 5 77 4 7 000 5 222 1111 66 0 5 44 5 5 0 6 6 6 7777777 1 1 6 222222222 1 3 33 6 0000 6 6 6 6 6 4444444444 3 6 888 99 0 4 111 1 5 55555555555555555555 8 8 77777 8 0 111 11 8 8 8 444 8 0 8 8 8 0 88888 0 000 55555555555 2 444 0 9 777 0 0 777 0 0 33 2 44444 0 4444 33333333 4444 0 777 33 0 33 77777777777777777777777777777777 666 0 0 00 33 0 4444 0 1 0 0 111 3 2 5555 2 3333333333 8888888888 000000000 0 2 00000 88888 0 1 000000 2 444 0 5 22 5 5 5 5 5 88 5 88 5 22222222222222 5 2 888888 22 888888 5 5 88 22 5 000 5 5 5 5 1 44 7 6 3 7 00 33 1 3 666 2 3 6 6 666666 7 7777 777777 3 3 3 3 88 22222222 3 3 7 33333 3 7 6 7 33 7 0 000 0 0 0 0 3 2 222 5 0 444 8 0 0 5 22 8 8 8 5 8 0 0 3 8 0 8 0 0 8 0 8 8 8 666 8 11 8 5 88888 11 8 6666 222 8 8 99 8 0 0 0 8 0000 0 6666 7777 11 11 11 00000 11 33 0000 5 5 1 5 1 111 0 3 6 6 3 6 888 6 6 6 6 7 6 1 7 1 88 00000 6 6 6 8888888888 6 6 6 888888 7 3 3 1 6 9999999999 6 6 99 6 99 4 6 0 999999 000 333 6 6 000000 6 000 6 6 6 1 444 11 777 55 8 8 0 0 0 222 1 1 8 8 7777 6 6 3 99 6 6 6 6 222 0000000000000 3 4444 6 1 6666666666666 3 6 99 6 3 55 1 000000 999999 0000000 11 11 6 11 11111111111111111111111111111 33 77 3 7 1 5 3333 5 000 5 1 666 2222 4 5 000 5 5 000 1 3333333 33 6 5 000 5 555 5 5 2222 5 00 5 5 33 1 77 6 0000 6 333333 6 6 6 6 6 7 4 6 99 3 00 99999 0 6 111 22222 6 8888888888 99 3 111 7 6 6 6 6 1 8 8 99 11 6 6 6 99 6 1111111 99 6 22222 6 22222 6 6 6 6 6 99 6 6 6 1 3 3 0000000 00000 222 1 7777 77 5 5 77 4 88888888 77 0000 4 5 2222 1 5 999 3 5 999 1 0 5 5 5 5 888888 22222222222 0 5 0 5 55 5 66 0 888 333 444444 00000 5 333 5 999999999999 5 5 77777777777 5 88888888888 77 6666 5 666666 44444 1111111111111 2222 5 5 5 5 22 0 0 66 5 5 1 55 77 5 0 5 5 33333 1
lowQualScore : . . . . .. .. .. . . ..... . ................ . .. . . . .. . . . .......... . . .. . . .. .. . . . . . . .... .. . ... . . ... .. ............. . . . . ... . . .. . ..... . ... .............. . . . . . . . . . . . ............ .. . .. . . . .............. . . . ................. . . . . ... . . ... .. . . . . ... . ... . . ........ . ..... . . . . . ... . . . . . . . .... . .. . . ... . ... .... .. . . .. . . . . . . ....... . . . ......... . . .. . .... . . . . . .......... . . ... .. . . ... . . .................... . . ..... . . ... .. . . . ... . . . . . . ..... . ... ........... . ... . . ... . . ... . . .. . ..... . .... ........ .... . ... .. . .. ................................ ... . . .. .. . .... . . . . ... . . .... . .......... .......... ......... . . ..... ..... . . ...... . ... . . .. . . . . . .. . .. . .............. . . ...... .. ...... . . .. .. . ... . . . . . .. . . . . .. .. . . ... . . . . ...... . .... ...... . . . . .. ........ . . . ..... . . . . .. . . ... . . . . . . ... . . ... . . . . .. . . . . . . . . . . . . . . . . . . ... . .. . . ..... .. . .... ... . . .. . . . . . .... . .... .... .. .. .. ..... .. .. .... . . . . . ... . . . . . . ... . . . . . . . . . .. ..... . . . .......... . . . ...... . . . . . .......... . . .. . .. . . . ...... ... ... . . ...... . ... . . . . ... .. ... .. . . . . . ... . . . . .... . . . .. . . . . ... ............. . .... . . ............. . . .. . . .. . ...... ...... ....... .. .. . .. ............................. .. .. . . . . .... . ... . . ... .... . . ... . . ... . ....... .. . . ... . ... . . .... . .. . . .. . .. . .... . ...... . . . . . . . . .. . .. ..... . . ... ..... . .......... .. . ... . . . . . . . . .. .. . . . .. . ....... .. . ..... . ..... . . . . . .. . . . . . . ....... ..... ... . .... .. . . .. . ........ .. .... . . .... . . ... . . ... . . . . . . ...... ........... . . . . .. . .. . ... ... ...... ..... . ... . ............ . . ........... . ........... .. .... . ...... ..... ............. .... . . . . .. . . .. . . . .. .. . . . . ..... .
lowQualScore : 7 7 7 0 11 99 99 7 7 33333 7 6666666666666666 1 77 0 7 4 99 7 7 7 6666666666 7 7 99 7 7 99 99 7 7 7 7 7 7 3333 99 7 333 4 4 000 99 1111111111111 7 4 7 7 000 7 6 99 4 77777 3 444 99999999999999 1 7 7 1 7 7 7 7 7 7 7 444444444444 66 7 99 4 4 7 11111111111111 7 7 7 11111111111111111 7 7 7 4 666 3 4 888 22 5 7 1 7 111 7 666 4 7 77777777 7 33333 3 7 7 7 7 333 7 7 7 5 7 2 7 3333 7 99 1 9 000 7 333 6666 99 8 0 00 0 7 7 7 7 7 5555555 0 7 7 222222222 7 3 33 7 0000 7 7 7 7 7 8888888888 7 7 333 88 7 2 777 0 6 88888888888888888888 0 0 00000 0 8 888 00 0 0 0 000 0 8 0 0 0 0 55555 0 222 55555555555 5 555 0 8 222 0 0 555 0 0 22 5 00000 2 2222 22222222 8888 0 000 88 0 55 88888888888888888888888888888888 222 2 2 22 88 0 8888 0 0 0 0 222 5 5 5555 5 8888888888 0000000000 000000000 0 5 22222 55555 0 0 555555 0 000 0 5 00 5 5 0 0 0 55 0 55 0 55555555555555 0 5 000000 00 555555 5 5 55 00 5 000 0 5 5 0 0 77 3 7 3 3 00 33 0 3 777 0 3 7 7 333333 3 0000 000000 3 3 3 3 33 00000000 3 3 3 00000 7 3 7 3 33 3 0 888 0 0 0 0 2 5 888 0 0 888 0 8 8 4 00 0 0 0 0 0 6 6 2 0 8 0 8 8 0 8 0 0 0 222 0 00 0 4 00000 00 0 0000 222 0 0 00 0 8 8 8 0 6666 8 2222 0000 00 88 22 00000 00 66 1111 7 7 7 0 4 444 7 5 7 7 3 7 333 7 7 7 7 3 7 0 3 0 33 88888 7 7 7 5555555555 7 7 7 777777 2 5 3 0 7 2222222222 7 7 22 7 22 8 7 2 222222 888 222 7 7 000000 7 888 7 7 7 0 000 00 000 88 0 0 8 8 8 000 0 0 0 0 0000 7 7 2 22 7 7 7 7 555 3333333333333 5 2222 7 0 7777777777777 5 7 22 7 3 88 0 222222 222222 8888888 88 88 7 33 22222222222222222222222222222 33 55 5 5 3 7 9999 7 000 7 4 666 1111 3 7 111 7 7 000 4 1111111 66 6 7 000 7 777 7 7 1111 7 00 7 7 33 4 99 7 8888 7 555555 7 7 7 7 7 5 2 7 22 5 88 22222 0 7 000 33333 7 0000000000 22 3 777 8 7 7 7 0 0 0 0 22 00 7 7 7 22 7 7777777 22 7 55555 7 55555 3 7 7 7 7 22 7 7 7 7 6 4 9999999 44444 999 4 0000 99 7 7 99 3 11111111 99 1111 3 7 1111 4 7 444 0 7 000 4 7 0 0 0 0 888888 55555555555 2 0 4 0 11 0 99 0 888 888 444444 99999 0 888 7 333333333333 7 7 11111111111 7 44444444444 99 6666 7 999999 33333 4444444444444 1111 7 7 0 0 00 7 7 44 7 7 7 99 99 0 7 7 7 11111 0
consensus : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GG-GTTT-GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T--NTT---TTTAA-TG-GC--GT----TGT--C-T-T-GGTG-CTGAAT-ATTACGGACTAGCA-TTTA--CGTTATATAAT-GC-C-AG-AAGAACGAC-T-C--------TGTTGAAG-AAA----AGGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAA-GCTTGG-TG--TAATGGGAA---CACA-GCGGAGCCGATGAT-A--CT--ATTCT-C-GTC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGGGGG-GAAC--TCAGCCCTACCTCA-CAGCTTT-CA-CG-CTTGACTT-CACAGGC-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CC-CGAATCCA-TA-C-TAATAA-CCGATTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAGCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAG--AT-CCGTC-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ATTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCCGTTTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTG-GC-TT-GCATG--TATGCTATGA--TGG-GTTTTTTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTTGCCATTATGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-T--A-----TATCAGAATCATTCACACAATGCG-TTA-AGACA-TCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGT--A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACCT-ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTNCGACCACTT---------------CACT------TTCAGTTCCAAAGCCACAACATATTCATGGNAAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CCGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGATTATT-AC-ATATA-TT-ATTG-CCATATT-TTATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTNGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGTCG--GCTTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTTAA-T--GC--ATTGG--N-GCAGCT-AC----TACCCTTG-C-A-CAGCAAGGCATT-GC--AAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---GAGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCCTT-GCGTATTTA-T-T---T---ATA--GCA---NA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-CACA-G-CAA-GGG--GCTGCCAGATC-CA-GGACA---G-GGGGACCAGACCTNATTAA
Reference ( family-719 ) : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GG-GTTT-GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T--NTT---TTTAA-TG-GC--GT----TGT--C-T-T-GGTG-CTGAAT-ATTACGGACTAGCA-TTTA--CGTTATATAAT-GC-C-AG-AAGAACGAC-T-C--------TGTTGAAG-AAA----AGGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAA-GCTTGG-TG--TAATGGGAA---CACA-GCGGAGCCGATGAT-A--CT--ATTCT-C-GTC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGGGGG-GAAC--TCAGCCCTACCTCA-CAGCTTT-CA-CG-CTTGACTT-CACAGGC-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CC-CGAATCCA-TA-C-TAATAA-CCGATTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAGCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAG--AT-CCGTC-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ATTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCCGTTTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTG-GC-TT-GCATG--TATGCTATGA--TGG-GTTTTTTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTTGCCATTATGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-T--A-----TATCAGAATCATTCACACAATGCG-TTA-AGACA-TCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGT--A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACCT-ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTNCGACCACTT---------------CACT------TTCAGTTCCAAAGCCACAACATATTCATGGNAAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CCGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGATTATT-AC-ATATA-TT-ATTG-CCATATT-TTATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTNGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGTCG--GCTTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTTAA-T--GC--ATTGG--N-GCAGCT-AC----TACCCTTG-C-A-CAGCAAGGCATT-GC--AAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---GAGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCCTT-GCGTATTTA-T-T---T---ATA--GCA---NA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-CACA-G-CAA-GGG--GCTGCCAGATC-CA-GGACA---G-GGGGACCAGACCTNATTAA
gi|1 : CGCATATT--TAG-C-TTGTCTAGCAATATG--CCCG-CCATT--AATAT-CTCCGGA---------ACTT---GTTCTCAT--GTCCTT-GTTG-TT-A--TT-ATGAA-AAAGG-GGG--GA-GTTTTATGTGTGGCCCATTCT--AT-TATTCCGCG--AA--AGTTGTCATT-CCG-C-ATTG-TTCGA----AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGGCCTAAT-AC-G-T-CAC---GAA-TCATGTGCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGCCCAGTG---TACAATTAC-G--GCCAGGGAAAACTCTGTAATGTCCTTTGC-A-TCAACTTGAAA-ATCTGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T---TT---TTTAA-TG-GC--GT----TGT--C-C-T-GGTG-CTGAATTATTACG-ACTAGC--TTTA--CGTTATATAAT-GC-CCAG-AAGAACGAC-T-C--------TGTTGAAA-GAA------GGGGAAGGGCGTTC-AC-G-C-T-CTAA---ACAGTCTCCC-ACGCCACAAC-CTGGAC-AAGAGGAC-AAA-GCTTGG-TGCTTAATGCGAAACACACA-GCGGAACCGATGAT----CT--ATTCT-C-ATC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGCGGGCGGAC--TCAGCCCTACCTCAACAGCTTTTCA-CA-CTTGACTTTCACAGGC-TGGCGC-ATCGCA-TC-CCG-T-AGTTGAA-GCGT--CCGCAAATCCA-TA-C-TAATAA-CCAATTCTTCGCGTAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCACAAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---GATGCATCA-ATTC-A-ATATGGCCC-CA--TGTTGCGCATTATT-CG--TGAATTCATAAC-CATGTTCA-TTCTA-TCATAGCCCACATTAGCCTACGTTGCCTGGTTTTGCCTG-ACATA-TA-TGCTCAG--ATACCGTC-AATTCACTCGC-GCCTGACAA-A--TTTA-CCAAATAG-GTTCAGCATAACTTAAAACAACCACTGAAA--------ACAAA-CCA-TCTTAGCCATTT-AGCCCTGGA-CGGATGCCCATTTCATAATACTA--TCTTACAT-GCATATAGGTTTGC-TGCTCAATTCATAGACAAATCAACTTTACATCTCA--AATAC-TTAAAG---GGC-G--GGGGGGGAGGGGATGCAGAAAAAGTCACAGGG-CT--TC--A--TTA-TGGCTAGCACTA-----TCTGTA-ACATTTGG-CAACACAGCACCTTAAGGCATTTGCTTTTTTTTT-AACTACAATGGGTCTTGCTATA-ATTCGCTGTGAGGTAT--CATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGAGGTCAAGCAGG------TGGGCCG------CCCAA-CAACACAACAATTATAAAACTTTTGGGCAGCGGGGGGATTCATAACGTAGGGTACATGAATCAATTTC-TCCTGGTTTAGTGCTGGTTAACCCTGCTGATTCTAAACTTCCA-TTTAAA-ACATGTAACAG-TTTTTATCATTGACACTGGTATTGAT-GTTGCGTTTGTG-TTATTT--TGCGACT----TTCTGAATTAACTTTTCTGCCCCCCAATGATTC-TTG-GCCTT-ACATG--TATGC---AA--TGG-GTTTTTAAT-TGACACTGACAGTAACTG-TCAACTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATGCTT--TATCA-TTTTCGCGGTTGGC-TAGTCATGGCCCAAATCACTGATTGACAT-GTTTCATTACT-TGGGCCGATTTTTAAATTCGC-AGCCA-T-GTGGATAGCCAGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAAAT-GTGGG-TGGTG-ATGC-TAGATCTTTCAA-CCA--TG-AC--ATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCCATCA-TTT--AGA-TTGACACTAATCAATATTTTGCCAGTATGATAAAACCTTTGCCGGAAGGAATTTTTAGA-----GTC--AAGGAAC--TTC----GA-TCT-GATCTTCAGAGCCTGGTGGGCAAGCCACTAAATGTTTTTTA-CAAAG-C-AT-TTCT--GCA-GC-GGG-GCGCTTCAGTTCGATTGATTTTA-GACATACACGGTT-GCGCTCCATAAGCCA-TCA-AA-T--------TATCAGAATCATTCACACAA-GCG-TTA-AGA-A-TCAATACCATA-ATCAAGTTTTTAAGAAGGCGGC-TT----------AATGT-TGTGTATTT-TT--C-TGCTTTAGTGAG-T-GA------TTCA--TAT--ACCG-G----T-GCTGGTGGATTTAGC-TTACT-GGTTGC-GAGCTGTTATTTT-CATGCCCGTCAATG--GACCTAACTTTCAGT-GCCACAAAA-TTGGG-TC-TCATTTTCAATCTTAAAACACC-TC-A----ATACAT-TCTTTAGAACTTGCCGA-CC-CATTGCT-GC-AGC---ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATATTTTCA-GTGTGCCGAATATGGCCTTAGTACACATT-TT-AACA----GATCAT-CTAACTCACATCGCG-TTATGCT-GT-CTGTTGCGACCAC---------------------------TTCAGTTCCAAAGCCACAACATATTCATGGGAAAAC-AAT-A--T-CACTG---TTTCTATAGCTTA-CAAC-CAGTGGCGCTC----TCCTTCAG-CCAGCTGG-CCGCCT-A-GCCCCAGC-GT----ACAGC-CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AG-C-TCATTCAGA-GCGCAGCTTTTTTTCAT--GTGTAATAGGAC----TATTACTATTC-TCAC---GTA-AGCAT-ACACCAAATCAG-GC-AATACAGTGGCCTTTTCAAGCC-TTCTCTTACACATAT--CACACTGGATTATT-AC-ATATA-TT--TTGCCCATATT-TTATTCATACAAGCGATACAATA--------AATT--CAGTT-AAGCCCCTTACATTTTCTGCGATTAGTTTTTCAT-GGAAGACAG-TCAATTAGGAATCGGCA-CTATACGCGTCGGGCTACC-AGCAG-GT-CAGGTAATAACC--TCCAC-TA-------CA-GC--CAGTTACAATT-AC---C-T-GG-GGGTTTTGATCACATGAAGA-GGGCAACATATTTTGTCACTTC-CATCG-CCT--GTCCC-CTTAC-TAGTTGCCAGCTTACTTCGGTACTGCCC-C--GGTTAGCGCTTAA-TTAGGT-GGATAG-ACTGTTCAGGCCATTTC-AA--TCCCACTCTTTAA-T--GCCAATTGG--G-GCAGCT-AC----TACCCTTG-CTA-CAGCAACGCATT-GCTTAAAT-AAGTTATTCAAGCGCC-AGCG-T-CAATGGCCGAAATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCTTTCGCGTATTTA-------T---ATA--GCC---AA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGT--TC-GGAGCCTCCATTAAAAACAGCCACA-G-CAATGCG--GCTGCCAGATC-CA-GGACAAGGG-GGGGACCAGACCTCATTAA
gi|10 : GAGGAC-AAA--CTAGG-TG--TAATGGGA----CACA-GCGGAGC-GATGGT-A--CT--AATCT-C-A-C-TAG-ACACTCGTCCA-GTA-CAGTCC-ATGGGGG---------AGTCC-AGCGTA-CAGCT---CA--G-CTCAACTC-CAGAG-C-TGG-----T-GCA-GC-CCG-T-GCTTGAA--TCCGTCC-CTAATAGC-TA---TAATAA-CCAACTCT---CGGAGCCGAGTACA----ATA-------------------------------------TGCA-AAATAATTATA--TTTTTCAGGGCC--CACAAC-CA-ATACACA-T---AATG-ATCA-ATTCTA-ATCTGGTCC-CA--T--TG-GCAT-ATCATG--T----TGATAAC-CATGTCCA-TTCTAAGCATAAAT-ATATTAGT-TACATTGC-TGGTT---CGTG-ACATA-CA--G-TCAG---T-CGGTC-A----------------ACAA-AAGTTGG-CCAAAT-T-GTT--GCATAACTTAAA-CA-------------------------C--T---AGC-ATTG-AACTCTGGA-TGGATGT--ATTTCATA-TATCA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATAGACAACTCAA---TA-ATCTTA--ATTATAT-AAAATTCGAC-T--GGGGGA---------CAGAAAA-TTCACAGGG-TTGGTCAAA--TTA-TGGCGAGCACTAAGTCTTTTGTTTACATTTGG-CAAC
gi|11 : CGCATATT-CTAGCC-TTGTCTAGCA--ATG--C--G-C-ATTTAT-CCT-CTCCGGGTTTTATTTTACTCGGAATTCTCA-T-ATCC-TTGTTG-TT-A--TT-ATGAACAAAGG-GGGGTGG-GGTT-GT-TGTTGCCCATTC---AT-TATTCCG-G--AA--AGTT-TCATT-CCG-CAATGG-TTCGA-TAGATTGTG-TT-A-ACATTTTACTTAG---TC--TTTT-------ATG--TGATAACGG-T-CACAGGAAA-TCATTTCCTCGAC--ATGCTCCGAA-GCC-ATTGT-GCT--GGT----TACAATTAC-GT-ACCAGGGAAAACCCTGTAATGTC-TTTGC-A-TAAACTTGAAA-AT-TGTTG--ATAATT-T--TAC-C-C--TG-GA-TT-AACT----T--GTT---TTTAA-TG-GCT-GT----TGC--C-T-TGGGTG-CTGA---ATTA-GGACT-GCA-TTTA--CGTTAT-TAAT-GC-A-AG-A--GACGAC-T-C--------TGTTGAAG-AAA----AGGGGTGGGGGCGTTCCAC-G-C-TCCTAA---ACAATCTCCC--CGC-ATAAC-CTGGAC-TAGAGGAC-AAA-ACGTGGTTG--T-AT-GGAA---CACA-GCGG-GACGATGAT-AACTT--TTTCTCC-GTC-TAG-A-CTTCAT
gi|12 : ttatT--AATCT-C--TC-TAA-ACCTTCGTCCA-GTA-TATCCC-ATGGAGG--AAC--CCAGCCC-ACCGCT-AAGCT---CAACA-CT-AACAC-CACAG-C-TGG-----T-GAA-GC-CCG-T-GCTTGAA--------------TCCG-TA-CCTAATAA-CCAACTTT---CGTAGCCGAGTACAGGTAATGCACTGTTCGTTATCTTTGCCTTCA-CAC-AACAACG-TGCA-AAATGATTATA--TTTCTCAGGGCC--CACAAA-CA-TTACACG-T---AATA-ATCA-ATTC-AGATATCGCCC-CA--T--TG-GCAT-AT------------------------CCA-TTCTAAGCATAAAT-ATATTAGC-TACATTGC-TGATT---CGTG-ACATAGTAATGCTCAGTTAG-CTTCC-A-TTCACTCG--G---T-CAACA--TTTGGCCAAAT-T-GTT--GCATAACTCAAA-CAATCA-----A--------ACAAAACCA-C-----T-AT----------------ATGC--ATTTCATA-TATTA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATTGACAACTCA-----ACAATTTA--A--AG-T-AAAGTTCGACTGGTGGGGGG---------CAGAAAT-GTCACAGGGTTT-GTC--AACTTA-TGGCGAGCACT------TCCATTTACATTTGG-CAAC
gi|13 : G--TACCT-GCATTGT-CAGGT-ATAACC--TCCAC-TAGGCACTACAGGC--CAGTTGCAATT-ACATGCAT-GGTGGG-TTGAATCACATGAAGAGGGGCAAT-TATTTTGTCACTTC-CA-CG-CCTCTGT-CCATTTAC-TAGTTGCCAGTCTACT-CAGTACTG-CC-CCGGGTTG--G-TTAATTTAGGTGGGATAG-CCTGT--AGA-CATTCA-AA--TCCCA-TCTCT-------C--ATTGG--TTGCAGCTTAC----T-CCCTTATC-AGCAGCAAGGCATTTGG--TAAT-AAGTTATTCA-GCGCCCAG-G-TTCAATG---AGGATCGGTC-----------GCGAATCGTC-TAT-A-TAT-C--C-CCC---AG---AT------TGT---T-ATTA-TTT--AATTATTA------------TATTTCA-TAA-----------GGCTT-GCGTATTTA-T-T---TTATATA--GCA---TA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGTTGTC-GG-GCCTCCATTAAAAACAG-CACATG-CAA-GGGCAGC--CCAGATCTCA-GGACA---ACGGGGACCAGACTT
gi|14 : TTA--CGTTATTTAAT-GC---AG-AA--ACGAC-T-C--------TGTTGAAG-AAA----AGGGGGAGGGGCGTT-CACGG-C-T-CTAA---TCAGTCT-CC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAT-ACGTGG-TG--T-AT-AGAA---CACAGGCG--GCCGATGAA-A--CTTAATTCT-CTGTCGTAGAACCTTCAT-TA-GGA-TATCCCAATGGGGG-GAA---TCAG--CTACCTCA-CAGCTTTACA-AG-CTTGACGT-CACA-GC-GGGCGCAAT-GCACTC-CCG-TGGCTTAAG-GTCC--CT-CAAATTCATTA-CTTAATA---CGATTCT---CGGAGCCGAGTACAGGTAATA----------TAT-------TTCG-CACAAAC---G-TGCA-AAATAATTATACTTTTCTCGGGACCCGCACAAA-CATTTGCACA-TTTGAATG-ATCATATTC-A-ATATGttctt
gi|15 : ATATT-TAAG-C-G-GTCTAGCA-T-TG--C--G-C--TT--C-TAT-CTCAGGG----------CT----GTTATTGT--GTTCTTTGTTG-TT-AATTT-ATGAA-AGAGGAGGG--GG-GGGT-GT---TTGCCCATTTTAAATGTATTCGG-T--AA--AATG-TCATT-CCATC-GGGG-TT-GATT--AT--TG-TT-T-AC---TGAGTTTG---TC--TGATGGAGGACGGG---AAT-AC-GTT-CAC---GAA-TCATTTCTTAGAA--AATCTG---G-GAC-A-TCT-------GTG----AGGATTACAGT-G---GCGGAATCGTTGTAATGTA--TTGT-AGTC----TG-AA-AT-TGTTT--A----T-A--TGTCC-T--TGTGA-TTAAAC-----TAAATG---CTTTA-TG-GC--TT----TATTGC-TAT-GGTG-----------AC-GAC-AGAT-TTTATTCGT--TATGAT-G--C-AGTAAGATCGACGTGC--------TGTT-ATG-AAA----GGGGGGG
gi|16 : tatgcaTACTTCCGTACTG-CCAC--GGTCG---CTTAATTTAGCTGGGATAG-ACAGT--AGG-TATTTC-AAAGTCC-ACTCTTTAG----GC--ATTGG--C-ACAGCT-AC----TACTCTTA-C-A-CAGCAAAGCATT-GC--AAATCAAGTTATTCAAGCGGC-AG-G-T-CAATG---AA-ATTGGTC-----------GCGTATCAGT-TAT-AC-AT-T--TGCTA---AG---AT------TGT---T-ATTA-TT---AAT-A--A------------CATT-CA-TAAGCCATTGATACGCCTT-GTGTATTTA-TAT---T---ATATGGCA---TACCAT---A--CATTT-----AT-------------TAAGT----TTTT-CATA-GGTCAAATTAAT-ATCTGGGTTGTC-AGATCCTCCATTATAAAGAG-GACA-G-C-A-GGG--CCTGCCAGATC-CA-GGACA---G-GGGGACCAAACCT
gi|17 : gtgCGCATATTTCTAG-C-TTGTCTAGCA-GATG--C--G-C-ATT--T--AT-CTCCGGA---------ACG----GT-CGCATT-GTCCTTTGTTGGTT-A--TT-ATGAA-AA----GGG--GG-GTTT-GT-TGTTGCCATTTCT--AT-TATTCCG-G--AATGGGGT-TCATTTCCG-C-ATGGATTCGA-T--AT--TG-TT-T-AAATTT-ACTTAG---TC--GTTT-------GGG---AAT-AC-G-T-CAC---GAA-TCATTTC-TCGAACAATTCTGC-AAAGCCGA-TGTTGGC--AGTGG--TACA-TTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAATGT-TGATG--A----T-TG-TA--C-C--TGCGA-TT-AAC-----T--TTTG--TTTAA-TG-GC--GT----TGT--C-C-T--TTGCCTGAAT-A-TACGGACTAt
gi|18 : tatCGCATATT-CTAG-C-T-GTCTAGCA-TATG--C--G-C-ATT--T-ATT-CTCCGGA---------ACG----GT-CTCATT-GTC-TTTGTTG-TTTA--TT-ATGAA-AAAGG-GGG--G----TT-GT-TGTTGCC-ATTCT--AT-ATTTCCG-G--AA--TGTT-CCATT-CCG-G-CTGG-TTCGAAT--AT--TG-TTTA-ACATTT-ACTTAG---TCCTTTTT------CGGG--TAAT-ACCG-T-CAC---GAAATCATTTTCTCGAA--ATTCTGC-AA-GCC---TGT-GGC--AGTG---T-CAATTGC-GT-GCCAGGGAAA-CCCTGTAA-GTC-TTTGC-A-TCAACTTGAAA-AT-TGTTGATA----T-T--TA--C-C--T--GA-TT-AAC-----T--TTG---TTTAA-TGCGC--GT----TGTTCC-T-T-GGTG-CTGAAT-ATTACGGACTA
gi|19 : tatC-AG-GAT-CAATG---GA-ATCGGTTCAGTTCTCTAAGCGAATCGGCCTATTAATAT-CTAC-CCGTAGAG---ATAATGGGTGTATAT-ATTC-TCTACAAT-TTTATTCTATAACGACCCTT-CA-TAA-----------GCTTT-GCGTA-TTA-T-T---T---ATG--ATAGATGA-CATTACAT-CATTCTTCCAATTTCACCACCTTAATAAGTATACTTTTGCACAGGGTCAAATTAATAATa
gi|2 : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--GAC-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AGAGG-GGG--GGAG----GC-TGTTGCCCATTTT--AT-TATTCCG-GATAA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG---------TTTTACTGAG---TC--TTTTTCTGTGCGGG---AAT-AC-G-T-CAC---GAA-TCATTT-CTAGAA--AATCTGG-AA-G-C-A-TGT-TGC--AG-GAATTACAATTGC-GT-GCCA-GGAAAACCCTGTAATGTC-TTTGT-G-TCAACTTGAAA-AT-TGTTAT-A----TGT--TA--C-CTTTG-GATTT-AACTAACAT--GCT---TTT-A-TG-GCTTTT----TGT--CAT-T-GGTG-CTGAAT-ATTACGGACTAGCATTTTA--CGTTAT-CAATGGC-C-AG-AAG-ACGAC-T-C--------TTGTGAAG-AAAAGGTAGGGGGGGGGGCGTTCCAC-A-CTT-CGAAT--ACAGTCTCCCAACGC-ACAACACTGGAC-TAGAGGAC-AAACGTTTGG-TG--TAATTGGAA---CACA-GCGGA-CCGATGATGA--CT--ATTCT-C--TC-TAG-ACCTTTATCTACAGA-TATCCC-ATGGGAG-GAAC--TCGGCCTAACCTCA-CAGCTTA-C--CGTCTTGACTT-CACA-GC-T-GCGC-AT-GCA-TTACCGAT-GCTTGAAGGTTC--CT-CGAATCCA-TAGC-TAATAACCCAATTCT---CGGAG-CGAGTACAGGT-TTAC---------TTA-------TTCGACAC-AAC---GTTGCA-ATA-AAATATA---TTCTCGGGGCC--CACAAACCA-TTGCACATT---GATG-A-CA-ATTC-A-ATATGGCCCACATGT--TG-GC---ATT-CGGTT----TCATAACTTGTGTTCATTTCTATGCATAG-C-ACATTAGC-TTTGTTGC-TGGTT---TGTGCCCATA-TA-TGCTCAG--AT-CCGTCAA-TTCACTCGGTG---GACAA-A--TTTA-CCAAAT-TGGTT--GCATAACTTAAA-CAACCA-----ATCTTGAATACAAA-CCACT---AGC-ATTTAAGCCCTGGACCGGATGC--ATTTCATA-TACTATCT-TTACCATGCATATAGGTT-GCATGCTCA-T--------------A-TTTACATCTCAACATTACTT-AAAG-GCG---G--GGGGGG---------CATAAAA-GTCACAG------GTC--A--TTATTGGCTAGCACT------TCTG-TTACATTTGGCCAACAC-GCACCTTAGGGGCTTTGTTTTTTTTTTTAACTACAATGGGTC-TGCTATAGATTCG-TGT-AGGTATTTCAT-CCACCT--GT-CAATCTAC--------------CGTGGAAA-TGGGGTCAAGGGGGGGGGTGTGGGGGGGGGGAACCCAAACAACAC-ACAA--ATTCAAC-TTTGGGCA---GGGGGGTTCATAACGTA-GGTACATAAATCAATTTCATTTTGG-TTAGTGCT-GTAAACCCTGCTGATTCTAAACTTCC-ATTTAAATA-ATGTAACAGTTTTTTA-CATTTACACTGCTTTTGATGGT-G-GTCTGTGTTTATTTCCT--GGCTATGATTCTGAATTAAC--T-CTG--CCT-AATGATTCTTTGTGC-TTGGCATGACTATCTTATGATTTGGTATTTTGTAT-TGACACTGACAGTAACTGTTCA-CTGTT-CATTTTG--TGTGCTA-TTCATG-CATAAA--TTTGAATG-TT--TATCA-TTTTCG-GGT-GGCTTAGTCATGGCAT-AATCACTGATTGA-AT-GTTTCATTA-T-TGGGC-AATT----------------A-T-GTG-----------------ATCTTC-TTATGCAT-AC-TTTCA-GACTAATGTAATT-GTGGG-TGGTG-AT-G-TAGATCTTTCAA-CCATTTG-AC-AATCTGTTCAT-----TC--CTACACAT-CTA--G-ATACA-TATCC-TCATTTT--ACATTTGACACTAATCAATA-TTTGC--TTAT--TGATACCTT----GG--GAA---TTTAGG-----GTC--AAGGAACT-TTCT---GA-TCTGGATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-CTAG-TTCT-GGCAGGC-GGGTGCG-TTCATTTCG-TAGATGTTACAACAT-CACGGTT---G-TCC-T-AGCCACTCA-CACT--ATTAATTATCAGAATCATTCACACAATGCGTTTA-AGACA-TCAATACC-TACGTCAAG-TTTTAAGAAGGCGGCTTT----------AATGT-TGTGTATTTCTT--CTTG--TTAGTGAGTTGGA------TTCA--TG---A-CGCG----TCGCTGGTGGATTTAGCTTTA---GGTGGC-GAG-TGTTACTTT-CA
gi|20 : atatAAT-GC-C-GG-AG--ACGAAAT-C--------TGTTGAAGAAAA----AGGGGGGAGGGCAAT-CAC-G-C-T-AAAAAGCACAGTCTCCC-ACGC----AC-C---ATATCGAAGAC-AAA--CTAGG-TG--TGTTGGG-A---CACA-GCGGAG-CGATGGC-A--CT--AATCT-C--TC-Tt
gi|21 : aagTTGTC-AGATCCTCCATTATAAAGAG-GACA-GTCAA-AGG--G-TGCCA-ATC-CA-G--CA---GCGGGGACCAGACTTAAT
gi|3 : ATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTT-A--ATTTACACT--TCTTGAT-GT-G-GT----G-TTATTTCCTGCAG-----ATTCTGAAT-AACTT--CTGCC----AATGATTC-TTG-GC-TT-GCATA--CATG-TATGA--TGG-GTTTTTTATATGACACTG-------------------TACATTTTGGTTGTGCTATTTCATGC-ATCAATTTTGAAATG-TT---ATCA-TTTTCG-GGT-GGC-TAGTCATG---CAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTT-AATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-T-ATGCAT-ACATTTCA-GACTAATGTAATT--TGGG-TGGTG-ATG--TAGATCTTTCAA-CCA--TG-ACCATACTGTTCATT----CC--CTACACAT-CTA--GCATA-AT-ATCC-TCA-TTT--TAA-T-GACACTAATCAATA-TT-GC-ATTATGATA---CCTT----GG--GAAATTT--AGG-------C--AAGGAAC--T-CT---GA-TCT-GATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-ATATTCTGG-CA--C-GGG-GCG-TTCATT-CG-TG----TTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-C--A-----TATCAGAATCAT---CACAATGCG-TTA-AGACA-TCAATAC--TA-GTCAAGTTTT-AAGAAGG-GGC-TT----------AATGT-TGTGATTTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGTT-A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-TCAG---GTCAATG--GAC-T-ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCA---TTTAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T--CTAGC-T-ATATT----------CTCTA-----GGG-GTTGTAGGAGGC------------ATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTGGTACACATT-TTTAACA----G-TCATACT------CATCGG--TTATGTG-GT-CTGTTG-GACCACTT---------------CA------------GTTC-AAAGC-ACAACATATTCATGG-AAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CC--CT-A-G---CAGC-GT----ACAG--CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCAT-CAGA-G-GCAGCTTTTT--CAT--GTGTAATA-GAC-----ATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTTTTCA--CCTTTCTCTTA-ACATAT--CACACTGGGT-AT--AC-ATATAATT-ATTG-C-ATATT-T-ATTCATACAAG-GATACAA-T--------AATC--CAGTT-AAG---C-TACA-TTTCTGCTATTAG-TTTTCAT-G-AAGACAGTTCAATTAGGAATCGGCAACTATAC-TGTCGG--TACCTTGCAT-GTTCAGGT-ATAACC--TCCACATA-------CAGGC--CAGTTACA-TT-AC---C-T-GG-G---TTTGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-C-T--GT-CC-CTTAC-TAGTTGCC-GCTTACTTCAGTACTG-CC----GGTTG--GTTTAATTTAGG-GGGATAGTAC-GT--AGG-CATTCC-AA-----CA-TCTT-AA-T--GC--ATTTG--G-GCAGCT-ACATACTACCCTTG-C-A-CAGCAAGGCATT-GC--TAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---G-GATCGGTC-----------G-GAATCGGC-TAT-A-TAT-C--C-CCA---AG---AT------TG----T-ATTATTT---AAT-ATTA------------CATT-CA-TAA-----------GCTTT-GCGTATTTATT-T---T---ATA--GCA---TA-CAT---A--CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC--GAGCCTCCATTAAAAACAG-CACA-G-CAA--GG--GCTGCCAGATC-CA-GGACA---A-GGGGACCAGACCTCATTAA
gi|4 : TAAATG-TTATCATCAATTTTAG-AGT-GGT-T-GTCATTGCA-AAATCAGTGATTGA-ATCGTTTCATTA-CATAGGC-GATTTC-ATTTTTGC-AGACAGT-ATGTATATC-AGCCATTGTGATCT----TATGCAT-ACATTTCA-GTCTA-TGTCATT-GTGTG-TTGAG-ATGGGTATACCTTTGAA-CCA--TG-ACAAATCTGTTTAA-----CCTGCTACATGT-TTA------ACATT-TCT-TCG-TTTGGAGA-TTGACACTAATCAATA-TT---CAT-ATGAGAATACCTT----GG--GAAATTT---AG-----GTC--AAGGAAC--TTCT---GAATCT-GATCTTCAGTGCCTGGTGGGCAAG---ATAAATGTTTTTAG-CAAAGCC-AT-TTCT-GGCA-GC-AGG-GCG-TTCAGTT-G-TAGATTTTACAACGC-CAGGATT-G-G-ACT-TAAGCCA-TCA-CA-TC-A-----TATCAGAATCATTTACATAATGCG-TTA-AGACA-TAAATA-CATG-GTTAAGGTTTT-AGAAGG-GAT-TTTTATTGGTNNNNNNN-NNNNNNNNN-NN--N-NN--NNNNNNNN-NNGAACCCCCTGCAACTGTTCA-CG-GACAGT-GCTGTTTGATATAGC-CTA---GGTTGC-TCG-TGTTATTTT-AAAG---GTCAATG--GGCCT-AGTTTCAGTGGCCACAAAA-TGGGG-TCTTTAC-TTCAATCTTAAAG-ACA-TT-A----TTACGT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-GTT-T----------CAGTA----TGGG-GTTGTAGAAGGC-----------AA-AACATAA--C-ATATA-TTTCATGTGTGC--AATATGACATTCTTA-ACA------AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-ATGTTA-GACCACTTATCATTGTGTCTTTACACTCAAATATTCAGTT-CAAAG-CACAACATATCCCTGACAAAACGAATAAATT-C-CTG---ATTCTACATCTTG-CAAA-CAGTAG-A-TT----TTGTTCAG-GCAGCTGG--TGCCT-A-G---CGGC-CT----ACAG--CAGACCAT-AAC---CCT-CAGC---TTA-TCC-T----AGCT-TCATTCAGG-G-GCAGC--TATTTCAA--GTGT--TA-CAT----T-TTA----TCGT--T---GTA-AGGAA-ACACCAAAG-AA-GCATATACAGTGG-CTATTCAGGTATTTCCCCTA-ACACAT--GACACTGGA-TATT-ACAATACATTT-ATTG--CATA-T-TTATTCATACATG-GATACGAGT--------AATC--CAGCTAAAA---CATACA-TTTCTGCAATTAG-TTTTCAT-TGAATACATATCTATTAGGAATCGGCA-CCATAC-TGTCGG--TACTAAGCAT-GT-TAGGA-ATAATTTGTCCAG-TT-------CAGGC--CAGGGATAATT-AC---A-TGGG-GGG-TTCGATCACAGAAAGCGGGATAAC-TATTTTGTCACTTCTCA-GT-TCC--G--CT-CTTAA-TCGTTGCCAGTTTATTCCCGTACTG-TCAC--GGTC---GCTTAGTTTAGCTGGGATAA-ACAGT--AGG-TATTTCAAA--TCCCACTCTTT-A-T--GC--ATTGG--C-GCAGCT-AC----TACGCTTG-C-A-CAGTAAGGCATG-GA--AAATCAAGTTATTCAAACGGT-AA-G-T-CGAT----GAGATCGGTC-----------GCGAATCAGT-TTT-AC-AT-C--CGTTA---AG---AT------TGT---T-AT----------T-ATTA------------CATT-TA-TAA-----------ACCTT-GTGTATTTA-TATTG-T---ATA--GCA---AA-CGT---AA-CGTTC-----AT-------------TAAAT----TTTT-CACA-GGTAAAATTCAT-ATCTGGGTTGTC-AGATCCTCCATCAAAAAGAG-AACA-G-CTA--GG--GCTGCAATATC-CA-GGACA---G-GGAGACCAGACCa
gi|5 : --TTCT---GA-TCT-GATCT-CAGAGCT--GCGGGCAAGT--CTAAAT---TTTTAGCAACC-T-AT-TTCTGG-CA-GC-AGG-GCG-TTCATT-CG-ATGATTT-ACAACA--CACTGTT------TC-TAAGCCA-TCA-CA-TCTA-----TATATGTATCATTCACACAATGC--TTAGAGACA-TCA-TAC-ATA--TCAA---TTTAAGAAGG-G-C-TT----------AATGTGTGTGTATTT-TT--C-TG--TTAGTG-G-TG-A------TTC---TG---A-CA-G----------GTGGATT-------A---GGTTGCCGAG-TGTTATTT--CATG---GTCGATG--GAC-T-ACTTCGAG---CTACAAAAGTTGGGGTCTTC-CTTTCA---------CACC-TCGA----ATACATCT-TTTAGA-CTTGT--AGCC-CATTG-T-GTTAGCCT-AT-AT----------C-CTA----TGGGCGTTGTAG----------------CATGGC-TAG--C-AT-TA-T---ATACATGC--AATATGGCCTTTGAACA---------ACA------------TAAACCAC---GGT-TTATGTAAGTACTGGTTTGATC-------------------CACT------T-CAGTTCCAAAGACACA-------CA-GGAAAACC-AATAA--TAC-CTG---TTTCTATAGCTTA-ACACACAGTGG-GGTCCAACTCCTTCAGACTGACTGGACCGCCTCATG---CAGCCGTCACTACAT--CATAACAC-AACACACCT-CAGCGACTAC-TCAAT----AGCC-TCAT-AAGA-G-GCAGCTTCTTTTCAT--GTGTAATA-GACG---TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTCTTCAAGCATTTCTCTTA-ACAAAT--CACACAGGATAAA--AC-ATATA-TTGATTG-C-ATATT---GTTCATACAAG-GATACAAATATTGAAATAATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTGGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTTGATCACATAAGGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGTCGGCTTACTTCAGTACGGCCC-C--GGTTG--G-TTAATTTAGGTGGGA---------------CATTCC-AA--TCCCACTC-TTAA-TGAGC--ATTGGCTG-GCA-CT-AC----TCACCTTG-C---CAGCAA-GCATT-GCT-AAAT-AACTTATTCAAGC-CC-AA-A-T-CAATG---GA-ATC-GTCAGA--------GCGA--TGTC-T-T-ACTATAT--C-CCA---AGC--AT------TGT---TCATTA-TT---
gi|6 : ccaGGGC-G-CTTTTAATTTCGCTAGCCA-TTGTGGATAGC-AGCAATGGTGATCTCCCTTATGCATGACATT-CATGACTAATGTAATTTGTGGGGTGGTGGATAG-CGAATCTTTCAAACCA--TGGACAAATCTGTTCATAGTTCCC--CTACACATGCTAAGGCATGCAT-ATCC-TCA-TTTT-AGA-TTGACACTA-TCA-TA-TTTGC-ATTATGA--ATACCTT----GG--GGAAATTTTAGGTCAAGGTCTTAAGGAAC--TTCCTGAGA-TCT-GATCTT-AGAGCCTGGTGG-CAAG---CTAA-TGTTTTT-A-CAAAA-CCAT-TTCTG--CA-GCAGGG-GCG-TTC-TTTCG-TTGATTT-ATAACAT-CACGGTTTG-G-TCC-TAAGCCA-TCAACACT--A-----TATCAGAATCCATCACACAATGCG-TTA-AGACAATCAATAC-ATA--TCAGGTTTTAAGAAAGG-GGC-CT----------AATGT-TGTGTATTT-TTTTC-TG--TTAGTGCG-TGGA------TTCG--TAT--A-CG-G----T-GCTGGTGGATTTAGC-TTACTAGGTTGC-GAG-TGTTATTTTTCAGG---GTCAATGTGGACCTGAATTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTC-ATCTTAATACACCATC-AATTTATACA--T-TTTAG-ACTTGT--A-CCGCATTG-TGGTTAGC-TAATCA-----------CTCTA----TGGG-G-TGTTGGAGG------------CATGGC-TAG--CAATATATTTTCATGTGTGCA-AATATGGCCTTGGTACACATT-TTAAACA----G-TCAT--------ATATCGGGTTTATGT--GT-CTGGTTTGACCACTT----------------------------AGTT-CAAAG-CACAACATATTCATTGG-ACAC-CATAA--TAC-CTGTTCTTTCTTAAGCTTA-CAACGCAGT-G-G-TC----TCCTTCAG-CCCACTGG--CGCCT-A-G---CAGC-GT----ACAGCACAGAACAC-AAC---CCTGCAGCT--TACTTCA-TGCAGAGCC-TCA-CCAGAGG-GCAGC--TTTTTCATTGGTGTAAT
gi|7 : AAACC-AATAA--TTC-CTG---TTTCTATAGCTTAACAAC-CAGTGG---TC----TC-TTCAG-CCAGCTG---CGCCT-A-G---CAGC--T----ACAG--CA-AACACTAAC---CCT-CAGC---TAA-TCA-T----AGCCCTCATC--GA-G--CAGCTTTT---CAT--GTGTAATA-GAC----TAT-ACAATTC-T--C---GAAGAGCATTACACCAAAT-AAAGCAAATACAG-GG-CA--TCAAGCCTTTCTCTTA-ACATAT--CACAC-GAATTACC-A----ATA-TT-AT-G-C---ATCATTATTCATACAAG-ATTACAAAT--------AATC--CATTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCATCGGAAGACAGTTTCATTAGGAATCC-CA-CTATAC-TGTC----TACCTCGGAC-AG-TAAGT-ATAACC--TCCAC-TA-------CAGGTTTCA-TTACAATTCAC---C-T-GG-T---TTGGATCACATGAAGAGGGACAAC-TATTAT-TCACTTC-CA-CGGCCT--GT-CC-CTTACCTAGTTGCCAGCT--------TACT----------TCA--G--TAAT-----------------GT--AGG-CATTCC-AA--TCCCACTCT--AACT--GC--ATTGG----GCA-CT-AC----TACCCTTG-C-A-CAGCAAGGCA-T-GC---AAT-AAG-TA-TCAAGCCCC-AG-G-T-CAA-----GA---CGGTC------------CGAATC-GC-TA--A-TAT-C--C-CCA---AGTAAAT------T-T------TTA-TT---AAT-ATTA------------CATT-CATTAG-----------GCTTT-GGGTATTTA-T-TTACT---ATA--GCA----A-CAT---ACACACTC-----AT-------------TAAGT----TTTT-CACA--GTCAATTTAATAATCT-GCTTGTCTAGAGCCT-CATTAAAAACAG-CACA-G-CA---GG--GC-GCC-GATC-CATGGACA-----AGGGACCAGACCTAATTAA
gi|8 : CGCATATT-CT-G-CATTGTC--GC--TATGTCC--G-C-ATT--T--ATGCCCTGGA---------ACT----GTCCTCATTCGTCCTT-GTTG-TTTA--TTTATGAA-AAAGG-GGG------TTG-GT-TGTTGCCCATTCT--AT-TATTCC--G--AA--AGTT-TCA-T-CCG-C-AT-G-TTCGA-T--AT--TGTTT-ATACATTTTACTTAGCGTTT--TTTT------T--A--TGAT-AC-G-TCCAC---GAA-TCATT--CTCGAA--AT----C-A----C-A-CGG-GGA--A-------AC-ATTAC-GTGGCCAGGT-AAACCCT-TAATGTC-TTTGCGA-TCAACTTGAAA-AT-TG-TG--A----TATTGTA--CTC--TG-GATTT-AAC-----T--TTTGCCCTTAATTA-AC--ACAAAATG-------T-G--G-CTGAAT-A--A-GAGCGAG-----TA--CGTATTAT-AT-GCGC-AG-A--AACGAC-T-CCCACACCGCGGCGCGC-CGA----AGGGGGGGGG----TTCAC-GAC-T-CT-A---ACAG---CCC-ACGC-ATAAC-CT-GAC-T--AGGACAAAA-G--TAG-TG--T-ACGTGAA---CA-A-GGGGA--CGAT-AT-A--CT--ATTAT-C--TC-AA------TCATCCA-GGATTATCCC-AATGGGG-GAACTTTCAGCCCTACCTCA-CAACACT-TA-CA-CTTGACTTCCACTGGCGCGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CCTCGAA-CCA-TT-C-TGAT---CTGA-TCT---CAGAGCTGCGGGCAAGT
gi|8 : atatttGAACCATTCT---GA-TCT-GATC-TCAGAGCT--GCGGGCAAGT--CTAAATTTTTctaaatttttagc
gi|9 : atatttcgcatattctgcattgtcgctatgtccgcatttatgccctggaactgtcctcattcgtccttgttgtttatttatgaaaaagggggttggttgttgcccattctattattccgaaagtttcatccgcatgttcgatattgtttatacattttacttagcgttttttttatgatacgtccacgaatcattctcgaaatcacacggggaaacattacgtggccaggtaaacccttaatgtctttgcgatcaacttgaaaattgtgatattgtactctggatttaacttttgcccttaattaacacaaaatgtggctgaataagagcgagtacgtattatatgcgcagaaacgactcccacaccgcggcgcgccgaagggggggggttcacgactctaacagcccacgcataacctgactaggacaaaagtagtgtacgtgaacaaggggacgatatactattatctcaatcatccaggattatcccaatgggggaactttcagccctacctcacaacacttacacttgacttccactggcgcggcgcatgcatcccgtgcttgaagtcccctcTACAT-T-TTTAGACCTTGT--A-CC-CATTG-T-GCTAGC-T-ATTGTAGGAGTGGGATTGTAGGAGTGGG-ATTGTAGGAGGCAAAACAAAAAACAAAAC-AAAAAC-ATATA-TTTCATGTGTGC--AATATGGCCTTAGTACGCATTCTT-AACAAAGAG-TAAT-CTAAATCACATCAGA-TTATGTG-GT-CTGTTA-GACCACTTATCATTGTGTCTCTACACTCAAATATTCAGTTC-AAAGC-ACAACATATCCCAGGTAAACC-AATAAATT-C-CTG---ATTCTATATCTTG-CAAA-CAGTGG-G-TC----TCGTTAAG-GCAGCTG--TTGCTT-A-G---CGGC-CT----ACAG--CAGACCAC-GAC---CCT-CAGC---TAC-TCC-T----AGCT-TCATTCAAA-G-GCTGC--TTTTTCAA--GTGTAATA-GACCATTTATTACAATTG-T--CGTTGTA-AGTAA-GCACTAAAG-AA-GCATACACAGTGG-CTATTCAGGCCTTTCCCCTA-ACATATGGC-CACTGAA-TATTGACAATACATTT-ATTG--TACA-C-TTATCCATACATG-AATACAAAC--------AATCCACAGCTAAAA---CATACA-TCTCTGCTATTTG-TTTTCAT-agc
blockSeqs : T C A T T TC . A . TATC G TTTTATTTTACTCGGA T TC T G T AT T C A GTGGGGTT . AA G . AT TG . T T A A TAG TG T TA A T CGT CT GGAGGACGGG A G T C AGG A C CA G CGAA C AT TGGCAGTGGT A G A . G G T . T ATAATTT TC T TT T T A TAACATGCT A T C TTTATTGCTA G C A AT C T CAT TT T T G GC T AGA G G CCACACCG A AGGTA C G A T C AGC A . A G A A A CGTT T . A G . G AGC AAC TA C TG G A C T A GAACTT T T . TTACAAG C C GG G CGCA . C A A G TCCGTCC T T CC AC C . G A CACTGTTCGTTATCTTTGCC A A AACG . CTT CG C T T TTG . T T G A TGT . AT TCGGTT G TTG T A AT . . . C G AT C TTAG AAT GTGGA AAG G TG . . AT ATCTTGAATACAAACCACTAGC TTA CC . . TCT T T . A CT A C ATT C ACATTACTT TTCGACTGGT . . G TTGG AAA T G AAGTCT T TTT C . GC T . G . . TT . . . . . G GGGGTG GG GGGGAA A . . TC . . . A . . A AA T C T T C GC T G G C T C G CTATGA T TT CCT T T . G AC TTATGATT T A A TTCA T A G T C T . ATC A . . T A G AT C C CA . T AT T G T G . T C G T T G G GGG A TT G C AGTTC TG G AGGC TA . T GG T . TGC TGAT . . AT TT TCAAG TT CA CTGA A G T T T T T G C T A GG G A T . T . A T C T TGG . C A CTATTAAT T G A CTACG T T C G T TTATTGGTNN G C TT T . A T ACCCCC AAC TTC . C ACAGT T CTA C . T A . TG CTG TG G G AAT T A A G ATTT C . A . G G . G CT TGTAGGAGTGGGA T GGAG C G CAAAACAAAAAAC T A AA A T A G TTTTT AAGAG CTAAAT GT AA A TT TTATCATTGTGTCTTTACACTCAAATATT CC AC T C A G ATT . TTC A A GG CAAC C A GAC C T . A CGTCACT CA C T ACA G GAC T A GCAG C TC G . TT T TG . CATT G CGTT G T . A . T G . GG T TA TGACA A G C TCATT . ATATTGAAAT CA A . A . . C T A A . . TT T T . TG A GGCACTA TT C ATGCA G TGGG G . T . G CT . A C A T A CCCCG GGT GTG T CCT . . A AG C TTAATGA . CTG G T ATAC A T AG G T TA C C . A T AGG CAGTTCTCTAA C T AT A TA G TAG TAA AATGGG ATAT T TAC T TTCTATAACGAC T T GCCATTGATAC . TTTTAT TG GATG C TACAT TTCCA TTCACCACCTTAA ATAC G G A G TA C T T A G CA T T T AC A
blockSeqs : . . . T G . . . . CT . ACG T T T . T . . . . GGGGGT . . . . . . . . . . . TT . . AT A G . . TCTGTGCGGG . C . . . . C . T CAAA A GA TGCAGGAATT . . T . . . . . T ATATTG C . . C T . TTTTGCC T . . TTTTTGTCAT . . A AT C T CA . T A . A . AG A . . . A C . . . . T . . . G . A . ACG . . A T . . GA GA . . A . . . . . GAAC C A . TACCGT T . G . CGC . . . . . GGTTCCT A . CT A C . G A CTTA . . GT . T . . . . . . . . . . T . AT CATGT C CA . A AT . . . . . T C AT AT GT CA . T . . AC AACAAAACCACT TG T . . T . T . . CT T C A C ATTATAT TTCGACT . . G TTTG AAC . G . C TTT . A T . . . . . C . G . . C . A . T CC . . . . . TATGA . . . . . . . . C . . T . . . . A G CA . . T . . TT . . . T . C . . . . . . AG . . . A T . . GC TA . . T . . TGC GAAT . . AT TT . . T T . . T T T T T . . C . GG . . . . T . G T C T GG . . . TCTA . . . CATGG G T . G . . . . . . . A . . A TT . . TC . . . . . A . . CT TG . . AT A A . . . . . A . . . . . TA ATT A . . A CA T . . . . . C TTTTA G CTAAAT G G . TT TTATCATTGTGTCTCTACACTCAAATATT C C T A A . ATT . . . G G . G . GC . . . G GT . G . . . T . . . . CC . . TT T . . G . C . . . . . A A . . T TT TACA T . C TTT . GT . A . G . . . A T . . . AA . . . . . . . . C . GGG T . . . . . . . . A T C CCAC GG CTG T ACA . . . . C TTAG . TT G . . A . A A . T C . . . . GAG AGA . . CT . . G . C . TC . T . . . . . . TATTGT . T . ACA . . . . . A G G G . . A G . T . . GC C
blockSeqs : . . . T T . . . . TA . ACG T T T . . . . . . GGGTTT . . . . . . . . . . . AT . . A A T . . CGGGT . . . . . . C . T CAA C A GGCAGTGT . . A . . . . . A ATATT . . . . . . TAAATG A . . GTTGTTCCT . . A AT C T AT . T A . C . G . . . . A T . . . . . . . . G . A . ACG . . G G . . GC A . . G . . . . . AAC C T . CTTACA T . G . CGC . . . . . GTCCCCT G . GC A T . G . TAT . . G . T . . . . . . . . . . T . . . . . . T C . . . . . . . T A A A . T . . . CTAGC . . . . T . G . . T . . . . AAGT GCGG . . . G A . T . T TT . . . . . . . . . AA . . T . . AT . . . G . C . . . . . . G . . . A . . . G TT . . . . . GC TA . . AA . . . . T . . C T T . A . . . . GG . . . . T . A T C C GG . . . TCA . . . TAG T T . A . . . . . . . N . . A T . . T . . . . . T . . T TG . . A A T . . . . . A . . . . . T TT T . . G C T . . . . . T TTCTT G TAAAC T G . G CACTT C C T G C . TA . . . . A . C . G . . . A CT . T . . . . . . . . TC . . TT T . . . . T . . . . . C A . . A T AC T . C TTT . AT . . . G . . . T A . . . TG . . . . . . . . A . GGG C . . . . . . . . G C A TCAC GC CTG T TAC . . . . C TAAT . C G . . A . A G . A . . . . . AA . . . T . . . . . . T . . . . . . . . TTTACT . T . AC . . . . . A G A G . . A A . T . . G A
blockSeqs : . . . T T . . . . TT . ACT C T T . . . . . . GGAG . . . . . . . . . . . T . . T A T . . ATGT . . . . . . T . T GAA C A GCTGGTT . . A . . . . . T TATGT . . . . . . TTGTT A . . TGTTGCCT . . A A C T . . A . . C . A . . . . G . . . . . . . . . . . C . CT . . . G . . AC A . . . . . . . . GAA C . . CAACA T . G . . . . . . . GTCCCT G . C . T . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . . . . TA . . . . . C AT . . . . . . . T . . C T C . T . . . . GG . . . . . . T . C T G . . . CTA . . . ATA . A . G . . . . . . . C . . G . . . T . . . . . G . . T . . . A . . . . . . . C . . . . . T AT T . . G C A . . . . . G . G ACT A G . A TTCA C C A T A . TA . . . . G . C . G . . . A GT . G . . . . . . . . C . . . T . . . . C . . . . . A G . . T T AC . . C CTT . AC . . . A . . . T C . . . TC . . . . . . . . C . G T . . . . . . . . A T C CCCC GC GTG T ACA . . . . C TTAT . G G . . C . A G . T . . . . . GA . . . C . . . . . . T . . . . . . . . TATT . T . AA . . . . . A . A C . . T . . T . . A
blockSeqs : . . . . T . . . . T . ACT . T T . . . . . . GTT . . . . . . . . . . . T . . T . . . . GGG . . . . . . . . T CA . A GGAA . . A . . . . . T ATTG . . . . . . TTTTG A . . ACAAAATG . . . A . G . . . . C . G . . . . A . . . . . . . . . . . . . CT . . . . . . AG A . . . . . . . . . . . . CAG . . G . . . . . . . . . . . . . . . . T . . C . T . . . . . . G . . . . . . T . T . . . . . CA . . . ATA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T CA . . . . C . . . . . . A . . . . . . A TT C C . . C . TT . . . . G . G . T . . . A CT . G . . . . . . . . A . . . . . . . . C . . . . . . . . . . T CA . . T TT . T . . . . . . . . T . . . . . . . . C . T G . . . . . . . . . . A CC GG GG . . . . . . . AACT . C . . . A . A G . A . . . . . GG . . . T . . . . . . T . . . . . . . . TTTT . A . A . . . . . . . A A . . A . . . . . G
blockSeqs : . . . . . . . . . T . CT . . . . . . . . . TTG . . . . . . . . . . . T . . . . . . . TAT . . . . . . . . . G . . GTG . . . . . . . . . ATA . . . . . . TTTG . . . GTTGTCC . . . . . . . . . A . . . . A . G . . . . . . A A . . . . . . T . . . . C . C . T . . . . . . . . . . . . G T . . . . . . . . . . C . . . . . . . . AG . . . . . . . . CT . . . . . . . . . . . . . . . . GA . . . C . . . . . . T . . . . . . . . TTT . . . A . . . . . . . C . . . . . . . . .
blockSeqs : . . . . . . . . GA . . . T . . . . . . . . .
blockSeqCons : T* ** TT*** ACN************* T* GGGGTT**** T*** GGG********** ATATT******* TTNTGC******** NTTGTTCCT******** AT* A** C** G** A**** CG** ** *** GN* A*** ** GAAC*** CNACG**** G* CGC* CC* *** TAT***************** G**** GG* G*** TA* GC** AAT* **** ** T*** *** GG* T* GG*** CTA******* ATA*** ** T** *** *** T** TG A** ** T** NT*********** C************ ** TTTTT* G***** A* TTCACTCAT******************** C* C* ATT* G** G** *** ** C***** T* AC*** C** TTT** *** ** TN GGG** GG*** NTG ** TNAT**** ** A** N** GA**** T* TTTT******* N* ** GC***
originalCons : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------ACT----GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GG-GTTT-GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG---TC--TTTT------CGGG--TAAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTG--A----T-T--TA--C-C--TG-GA-TT-AAC-----T--NTT---TTTAA-TG-GC--GT----TGT--C-T-T-GGTG-CTGAAT-ATTACGGACTAGCA-TTTA--CGTTATATAAT-GC-C-AG-AAGAACGAC-T-C--------TGTTGAAG-AAA----AGGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAA-GCTTGG-TG--TAATGGGAA---CACA-GCGGAGCCGATGAT-A--CT--ATTCT-C-GTC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGGGGG-GAAC--TCAGCCCTACCTCA-CAGCTTT-CA-CG-CTTGACTT-CACAGGC-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CC-CGAATCCA-TA-C-TAATAA-CCGATTCT---CGGAGCCGAGTACAGGTAATAC---------TAT-------TTCG-CAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAGCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAG--AT-CCGTC-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ATTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCCGTTTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTG-GC-TT-GCATG--TATGCTATGA--TGG-GTTTTTTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTA--GCATACATTATCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTTGCCATTATGATAATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-T--A-----TATCAGAATCATTCACACAATGCG-TTA-AGACA-TCAATACCATA-GTCAAGTTTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGT--A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACCT-ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-ATTAT----------CTCTA----TGGG-GTTGTAGGAGGC-----------CATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATT-TT-AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTNCGACCACTT---------------CACT------TTCAGTTCCAAAGCCACAACATATTCATGGNAAAAC-AATAA--T-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG-CCGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGATTATT-AC-ATATA-TT-ATTG-CCATATT-TTATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTNGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGTCG--GCTTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTTAA-T--GC--ATTGG--N-GCAGCT-AC----TACCCTTG-C-A-CAGCAAGGCATT-GC--AAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG---GAGATCGGTC-----------GCGAATCGGC-TAT-ACTAT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCCTT-GCGTATTTA-T-T---T---ATA--GCA---NA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-CACA-G-CAA-GGG--GCTGCCAGATC-CA-GGACA---G-GGGGACCAGACCTNATTAA
finalCons : CGCATATT-CTAG-C-TTGTCTAGCAT-ATG--C--G-C-ATTTT---AT-CTCCGGAACN-------------GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGGGGGGTT----GT-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGAT---AT--TG-TT-A-ACATTTTACTTAG---TC--TTTTGGG----------AAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA-AT-TGTTGATATT-------TA--C-C--TG-GA-TT-AACTTNTGC--------TTTAA-TG-GCNTTGTTCCT--------T-GGTG-CTGAATAT-TACGGACTAGA--TTTA--CGTTATATAAT-GCC--AG-AG--ACGAC-T-C--------TGTTGAAG-AAAA----GGGGGGGGGGCGTTCCAC-G-C-T-CTAA---ACAGTCTCCC-ACGC-ATAAC-CTGGAC-TAGAGGAC-AAACG--TGG-TG--TAATGGGAA---CACA-GCGGGN-CGATGATA---CT--ATTCT-C--TC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGGGGGGAAC---TCAGCCCTACCTCA-CAGCTCNACG----CTTGACTT-CACAG-C-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CC-CGAATCCA-TACC-TAATAA-CCGATTCT---CGGAGCCGAGTACAGGTAATATAT-----------------TTCG-CAC-AACG----TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAGCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAG--AT-CCGTC-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ATTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCCGTTTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTG-GC-TT-GCATG--TATGCTATGA--TGG-GTTTTTTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTAG---ATACATA-TCC-TCA-TTT--AGA-TTGACACTAATCAATA-TTGC--ATTATGAAAT-ACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGG-CA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTTGG---TCC-TAAGCCA-TCA-CACTA-------TATCAGAATCATTCACACAATGCG-TTA-AGACA-TCAATACATA---TCAAGTTTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-TT--C-TG--TTAGTGAG-TGGA------TTCA--TGT--A-CG-G----T-GCTGGTGGATTTAGC-TTA---GGTTGC-GAG-TGTTATTTT-CANG---GTCAATG--GACT--ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCA--CTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGCT--ATNT-----------CTCTA----TGGG-GTTGTAGGAGGC------------ATGGC-TAG--C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATTTTT-AACAG-----TCAT-CTAAATCACATCGGG-TTATGTG-GT-CTGTTA-GACCACTTCACTCAT--------------------CAGTTC-AAAGC-ACAACATATTCATGGNAAAAC-AATAAATT-C-CTG---TTTCTATAGCTTA-CAAC-CAGTGGG--TC----TCCTTCAG-CCAGCTGG--CGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-TC-----GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGAT-ATAC---ATATA-TT-ATTGC--ATATTT--ATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGCA-CTATAC-TGTCGG--TACCTNGCAT-GT-CAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GGGGG--TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGTCGG---TTAATTTAGNTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCACTCTTNAT----GC--ATTGG--N-GCAGCT-AC----TACCCTTG-CA--CAGCAAGGCATT-GCN--AAT-AAGTTATTCAAGCGCC-AG-G-T-CAATGGA----ATCGGTC-----------GCGAATCGGC-TAT-AT-AT-C--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAA-----------GCCTT-GCGTATTTATTTT-------ATA--GCA---NA-CAT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAGN-ACA-G-CAA--GG--GCTGCCAGATC-CA-GGACAGC---GGGGACCAGACCTNATTAA
Alignments
lowQualScore : 111111111111111111111111111
lowQualScore : 22222 22222222222222222 11 1 111111111 1111 111 1111 555555555555555 1 111 22222222222222 11111111 1 1 2222222222 1111111111111111 222 1 111 11 1 22222222 11111 11111 1 1111 1111 11 1111111 1 2222222222 1 1111 2222222222 11 111 4444444444444444444444444 11111 111 11 111 1 11111 1 111 44444444444 111 1 111 1 1 111 1 1 11 22222 1111 44444444 1111 1 111 11 1 66666666666666666666666666666666 111 11 11 1 1111 1 1 1 111 2222 2222222222 2222222222 444444444 1 22222 11111 1 444444 1 1 1 1 1 1 1 11 1 11 1 55555555555555 1 222222 222222 1 1 11 1 222 1 1 1 1 11 1 22 33 1 111 1 1 333333 2222 222222 1 1 1 1 11 22222222 1 1 22222 11 1 222 1 1 1 1 111 1 1 111 1 111 11 1 22222 11 3333 11 111 2222 1111 11 11 22222 11 11 1111 222 1 22222 222222222 2222 1 1 2222222222 111111 111 2222 222222 11111 111 11 22 33 1111 33333333333333 1111 33333333333333 1 11 11111 111111 1111111 11 11 666666666666666666666666666 1 111 1 111 1111 111 111 1111111 11 111 111 1111 22 2222 111111 11111111 1 22222222 1 111 11 11 2222222 11111 2222222 111 2222 2222 1111 222 1 1111 33333333333 1 111 111111 11111 111 222222222222 22222222222 11 11 111 11111 3333333333333 1111 1 11 2222
lowQualScore : 5 5 5 5 77 77 77 5 5 11111 5 99999999999999999 7 00 5 5 1 77 5 5 5 333333333 5 5 0 77 5 5 77 77 5 5 5 5 0 5 7777 77 5 333 1 8 2222 666666666666666 5 1 5 5 000 5 6 77 1 66666 4 999 33333333333333 0 5 5 0 1 5 5 5 5 0 77777777 5 5 77 1 1 6666666666 1 5 5 7777777777777777 5 4 1 888 4 1 999 99 3 1 0 5 222 33 77 5 1 5 00000000 22222 6 77 6 6 6 6 33333 6 6 4 6 6 1 3 5 5 5 888 5 77 4 7 5555 0 1 5 1111 66 0 88 5 5 0 6 6 6 7777777 1 1 6 8888888888 1 3 6 6 6 0000 6 6 6 6 6 4444444444 3 6 00 99 0 4 111 1 99 0 6666666666666666666666666 8 77777 8 0 111 11 8 8 8 444 8 0 8 8 8 0 88888 0 000 55555555555 2 444 0 9 777 0 0 777 0 0 33 2 44444 0 4444 33333333 4444 0 777 33 0 33 77777777777777777777777777777777 666 0 0 00 33 0 4444 0 1 0 0 111 3 2 5555 2 3333333333 8888888888 000000000 0 2 00000 88888 0 1 000000 2 444 0 5 22 5 5 5 5 5 88 5 88 5 22222222222222 5 2 888888 22 888888 5 5 88 22 5 000 5 5 5 5 1 44 7 6 3 7 00 33 1 3 666 2 3 6 6 666666 7 7777 777777 3 3 3 3 88 22222222 3 3 7 33333 3 7 6 7 33 7 0 000 0 0 0 0 3 2 222 5 0 444 8 0 0 5 22 8 8 8 5 8 0 0 3 8 0 8 0 0 8 0 8 8 8 666 8 11 8 5 88888 11 8 3333 8 8 8 99 8 0 0 8 999 8 0 0 8 8888 7777 11 11 11 00000 11 33 0000 5 5 1 5 1 111 0 3 6 6 3 6 6 6 6 6 7 6 1 7 1 88 00000 6 6 6 333333333 6 6 6 6 3 2222 5 3 1 6 9999999999 6 6 99 6 99 4 6 0 999999 000 3333 6 6 000000 55555 99 6 6 6 1 444 11 8 22 55 8 8 0 0 0 00 0 66666 8 8 7777 6 6 3 99 6 6 6 6 888 88888888888888 3 4444 6 1 6 6 99999999999999 6 3 55 1 44444 999999 0000000 1 6 11 6 6 6 11 111111111111111111111111111 6 6 6 3 7 1 5 5 5 000 5 1 666 2222 4 5 444 5 5 000 1 3333333 33 6 5 000 5 555 5 5 2222 5 888 5 5 33 77 6 0000 6 333333 6 6 6 6 6 7 4 6 99 3 6 88888888 6 3 6 99 6 6 1 44444444 99 3 111 7 6 6 11 6 1 8 8 99 11 6 6 6 99 6 1111111 99 6 22222 6 6 6 6 6 6 6 77 99 6 6 6 1 3 3 0000000 000 66 555 1 7777 77 5 5 77 5 5 888888 77 0000 4 2222 5 1 5 999 3 5 000 1 0 5 5 5 5 5 0000 22222222222 5 6 5 9999 5 66 0 888 333 444444 00000 5 333 5 999999999999 5 5 77777777777 5 5 99 5 55 6 5 000 88 44444 1111111111111 2222 5 5 5 22 0 0 66 5 5 1 5 5 1 5 0 5 5 8888 1
lowQualScore : . . . . .. .. .. . . ..... . ................. . .. . . . .. . . . ......... . . . .. . . .. .. . . . . . . .... .. . ... . . .... ............... . . . . ... . . .. . ..... . ... .............. . . . . . . . . . . ........ . . .. . . .......... . . . ................ . . . ... . . ... .. . . . . ... .. .. . . . ........ ..... . .. . . . . ..... . . . . . . . . . . ... . .. . . .... . . . .... .. . .. . . . . . . ....... . . . .......... . . . . . .... . . . . . .......... . . .. .. . . ... . .. . ......................... . ..... . . ... .. . . . ... . . . . . . ..... . ... ........... . ... . . ... . . ... . . .. . ..... . .... ........ .... . ... .. . .. ................................ ... . . .. .. . .... . . . . ... . . .... . .......... .......... ......... . . ..... ..... . . ...... . ... . . .. . . . . . .. . .. . .............. . . ...... .. ...... . . .. .. . ... . . . . . .. . . . . .. .. . . ... . . . . ...... . .... ...... . . . . .. ........ . . . ..... . . . . .. . . ... . . . . . . ... . . ... . . . . .. . . . . . . . . . . . . . . . . . . ... . .. . . ..... .. . .... . . . .. . . . . ... . . . . .... .... .. .. .. ..... .. .. .... . . . . . ... . . . . . . . . . . . . . . . .. ..... . . . ......... . . . . . .... . . . . .......... . . .. . .. . . . ...... ... .... . . ...... ..... .. . . . . ... .. . .. .. . . . . . .. . ..... . . .... . . . .. . . . . ... .............. . .... . . . . .............. . . .. . ..... ...... ....... . . .. . . . .. ........................... . . . . . . . . . ... . . ... .... . . ... . . ... . ....... .. . . ... . ... . . .... . ... . . .. .. . .... . ...... . . . . . . . . .. . . ........ . . . .. . . . ........ .. . ... . . . .. . . . . .. .. . . . .. . ....... .. . ..... . . . . . . . .. .. . . . . . . ....... ... .. ... . .... .. . . .. . . ...... .. .... . .... . . . ... . . ... . . . . . . . .... ........... . . . .... . .. . ... ... ...... ..... . ... . ............ . . ........... . . .. . .. . . ... .. ..... ............. .... . . . .. . . .. . . . . . . . . . . .... .
lowQualScore : 7 7 7 0 11 99 99 7 7 33333 7 77777777777777777 1 77 0 7 4 99 7 7 7 333333333 7 7 7 99 7 7 99 99 7 7 7 7 7 7 3333 99 7 333 4 4 1111 111111111111111 7 4 7 7 000 7 6 99 4 77777 3 444 99999999999999 1 7 7 1 7 7 7 7 7 7 66666666 7 7 99 4 4 6666666666 7 7 7 6666666666666666 7 3 4 666 3 4 666 22 5 7 1 7 111 66 99 7 4 7 77777777 33333 7 77 7 7 7 7 77777 7 7 2 7 7 0 2 7 7 7 666 7 99 1 9 0000 7 0 7 6666 99 8 88 0 7 7 7 7 7 5555555 0 7 7 0000000000 7 3 7 7 7 0000 7 7 7 7 7 8888888888 7 7 33 88 7 2 777 0 22 6 8888888888888888888888888 0 00000 0 8 888 00 0 0 0 000 0 8 0 0 0 0 55555 0 222 55555555555 5 555 0 8 222 0 0 555 0 0 22 5 00000 2 2222 22222222 8888 0 000 88 0 55 88888888888888888888888888888888 222 2 2 22 88 0 8888 0 0 0 0 222 5 5 5555 5 8888888888 0000000000 000000000 0 5 22222 55555 0 0 555555 0 000 0 5 00 5 5 0 0 0 55 0 55 0 55555555555555 0 5 000000 00 555555 5 5 55 00 5 000 0 5 5 0 0 77 3 7 3 3 00 33 0 3 777 0 3 7 7 333333 3 0000 000000 3 3 3 3 33 00000000 3 3 3 00000 7 3 7 3 33 3 0 888 0 0 0 0 2 5 888 0 0 888 0 8 8 4 00 0 0 0 0 0 6 6 2 0 8 0 8 8 0 8 0 0 0 222 0 00 0 4 00000 00 0 2222 0 0 0 00 0 8 8 0 888 0 8 8 0 0000 0000 00 88 22 00000 00 66 1111 7 7 7 0 4 444 7 5 7 7 3 7 7 7 7 7 3 7 0 3 0 33 88888 7 7 7 555555555 7 7 7 7 2 7777 3 3 0 7 2222222222 7 7 22 7 22 8 7 2 222222 888 2222 7 7 000000 88888 22 7 7 7 0 000 00 0 00 88 0 0 8 8 8 00 8 22222 0 0 0000 7 7 2 22 7 7 7 7 777 88888888888888 5 2222 7 0 7 7 22222222222222 7 3 88 0 22222 222222 8888888 0 7 88 7 7 7 33 000000000000000000000000000 7 7 7 5 5 3 7 4 7 000 7 4 666 1111 3 7 333 7 7 000 4 1111111 66 6 7 000 7 777 7 7 1111 7 000 7 7 77 99 7 8888 7 555555 7 7 7 7 7 5 2 7 22 5 7 88888888 7 3 7 22 7 7 7 22222222 22 3 777 8 7 7 77 0 0 0 0 22 00 7 7 7 22 7 7777777 22 7 55555 7 7 7 3 7 7 7 77 22 7 7 7 7 6 4 9999999 000 44 111 4 0000 99 7 7 99 7 7 333333 99 1111 3 1111 7 4 7 444 0 7 111 4 7 0 0 0 0 0 6666 55555555555 0 5 0 0000 0 99 0 888 888 444444 99999 0 888 7 333333333333 7 7 11111111111 7 7 33 7 77 6 7 000 77 33333 4444444444444 1111 7 7 0 00 7 7 77 7 7 7 7 7 7 7 7 7 7 1111 0
consensus : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------AC----T-GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GGGGTT-G-T-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG----TCTTTT-------G-GG---AAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAAAT-TGTTGAT-A--T-T-TA-C-C--TG-GA-TTAACT--T--NTG-CTTTAA-TG-GCGT----TGT-T-CCT-T-GGTGCTGAAT-ATTACGGACTAG-ATTTTA--CGTTATATAAT-GC-C-AG--AG--A-CGAC-T-C--------TGTTGAAGAAA----AGGGGGGG-GGGCGTTCCAC-G-C-T-CTAA-A---CAGTCTCCC-ACGC-ATAAC-C-TGGACTAGAGGAC-AA-A-CG--TGG-TG--TAATGGGAA---CACAGCGGGNC-GATGAT-A--CT--ATTCTC--TC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGGGGG-GAAC--TCAGCCCTACCTCA-CAGCTC-N--AC--G-CTTGACTT-CAC-AG-C-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CC-CGAATCCA-TACCTAATAA-CCGATTCT---CGGAGCCGAGTACAGG--TAATAC---------TAT-------TTCGCAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAGCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAG--AT-CCGTC-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ATTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCCGTTTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTG-GC-TT-GCATG--TATGCTATGA--TGG-GTTTTTTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTAGC--ATACA-TATCC-TCA-TTT--AGA-TTGACACTAATCA-ATAT-TTG-CATTA-TGA-AATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-CTA-----TATCAGAATCATTCACACAATGCG-TTA-AGACA-TCAATA-CAT-A--TCAAG-TTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-T--TC-TG--TTAGTGAG-TGGA------TTCA--TG-T--A-CG-G----T-GCTGGTGGATTTAGC-T---TA--GGTTGC-GAG-TGTTA-TTTTCANG---GTCAA--TGGA-CTT-ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCAATCTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-AT-N-------T----CTCTA----TGGG-GTTGTAGGAGG-CATGGC-TAG--------------C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATTTTTAACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CT-G-TTN-GACCACTT---------------CACT-------TCAGTT-C-AAAG-CACAACATATTCATGGNAAAAC-AATAAATTC-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG--CGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGA-TA-T--A-C-ATAT-A-TT-ATTG--CATA-TTTATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGC-ACTATAC-TGTCGG--TACCTNGCAT-G-TCAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGT---CGG-TTAATTTAGGTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCA-CTC-TTAAT--GC--ATTGG--N-GCAGC----T-ACTACCCTTG-C-A-CAGCAAGGCATT-GC--AAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG-G----AATCGGTC-----------GCGA-ATCGGC-TA-T--A-TATC--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAAGCC-----------TT-GCGTATTTAT-TT--T-ATA--GCANAC-AT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-CACA-G-CAA-G-GGCTG-CCAGATC-CA-GGACA--G-GGGGACCAGACCTNATTAA
Reference ( family-719 ) : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--G-C-ATT--T-TAT-CTCCGGA---------AC----N-GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AAAGG-GGG--GGGGTT-G-T-TGTTGCCCATTCT--AT-TATTCCG-G--AA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG-TT-A-ACATTTTACTTAG----TCTTTT-------G-GG---AAT-AC-G-T-CAC---GAA-TCATTTCCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGC--AGTG---TACAATTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAAAT-TGTTGAT-A--T-T-TA-C-C--TG-GA-TTAACT--T--NTG-CTTTAA-TG-GCNT----TGT-T-CCT-T-GGTGCTGAAT-ATTACGGACTAG-A-TTTA--CGTTATATAAT-GC-C-AG--AG--A-CGAC-T-C--------TGTTGAAGAAA----AGGGGGGG-GGGCGTTCCAC-G-C-T-CTAA-A---CAGTCTCCC-ACGC-ATAAC-C-TGGACTAGAGGAC-AA-A-CG--TGG-TG--TAATGGGAA---CACAGCGGGNC-GATGAT-A--CT--ATTCTC--TC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGGGGG-GAAC--TCAGCCCTACCTCA-CAGCTC-N--AC--G-CTTGACTT-CAC-AG-C-TGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CC-CGAATCCA-TACCTAATAA-CCGATTCT---CGGAGCCGAGTACAGG--TAATA----------TAT-------TTCGCAC-AAC---G-TGCA-AAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---AATG-ATCA-ATTC-A-ATATGGCCC-CA--T--TG-GCAT-ATT-CG--T----TCATAAC-CGTGTCCA-TTCTAAGCATAGAC-ACATTAGC-TACGTTGC-TGGTT---CGTG-ACATA-TA-TGCTCAG--AT-CCGTC-A-TTCACTCG--G---GACAA-A--TTTG-CCAAAT-T-GTT--GCATAACTTAAA-CAACCA-----A--------ACAAA-CCA-T---AGC-ATTT-AGCCCTGGA-CGGATGC--ATTTCATA-TACTA--T-TTACAA-GCATATANGTT-GC-TGCTCA-CTCATAGACAACTCAA-TTTACATCTCA--ATTAC-T-AAAGTTCGAC-G--GGGGGG---------CAGAAAA-GTCACAGGG-TT-GTC--A--TTA-TGGCNAGCACTA-----TCCGTTTACATTTGG-CAACACAGCACCTTAGGGNNTTTGCTTTTTTTTTTAACTACAATGGGTCTTGCTATAGATTCGCTGTGAGGTATTTCATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGGGGTCAAGCGGGGGGGTGTGGGNNGGGGGAACCCAAACAACACAACAATTATNNAACTTTTGGGCAGCGGGGGGGTTCATAACGTAGGGTACATGAATCAATTTCATCCTGGTTTAGTGCTGGTNAACCCTGCTGATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTTTA-CATTTACACTG-TNTTGAT-GT-G-GTCTGTG-TTATTTCCTGCGGCT---ATTCTGAATTAACTTT-CTGCCCCC-AATGATTC-TTG-GC-TT-GCATG--TATGCTATGA--TGG-GTTTTTTAT-TGACACTGACAGTAACTG-TCA-CTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATG-TT--TATCA-TTTTCG-GGT-GGC-TAGTCATGGCACAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTTTAATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAATT-GTGGG-TGGTG-ATGG-TAGATCTTTCAA-CCA--TG-ACAAATCTGTTCAT-----CC--CTACACAT-CTAG---ATACA-TATCC-TCA-TTT--AGA-TTGACACTAATCA-ATA--TTG-CATTA-TGA-AATACCTT----GG--GAAATTTTTAGG-----GTC--AAGGAAC--TTCT---GA-TCT-GATCTTCAGAGCCTGGCGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-AT-TTCTGGCA-GC-GGG-GCG-TTCATTTCG-TNGATTTTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-CTA-----TATCAGAATCATTCACACAATGCG-TTA-AGACA-TCAATA-CAT-A--TCAAGTTTTTAAGAAGG-GGC-TT----------AATGT-TGTGTATTT-T--TC-TG--TTAGTGAG-TGGA------TTCA--TG-T--A-CG-G----T-GCTGGTGGATTTAGC-T---TA--GGTTGC-GAG-TGTTA-TTTTCANG---GTCAA--TGGA-CT--ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCA--CTTAAAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-AT-N-------T----CTCTA----TGGG-GTTGTAGGAGG-CATGGC-TAG--------------C-ATATA-TTTCATGTGTGC--AATATGGCCTTNGTACACATTTTTAACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-CT-G-TTA-GACCACTT---------------CACTCA-----TCAGTT-C-AAAG-CACAACATATTCATGGNAAAAC-AATAAATTC-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG--CGCCT-A-G---CGGC-GT----ACAG--CANAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCATTCAGA-G-GCAGCTTTTTTTCAT--GTGTAATA-GAC----TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTNTTCAAGCCTTTCTCTTA-ACATAT--CACACTGGA-TA-T--A-C-ATAT-A-TT-ATTG--CATA-TTTATTCATACAAG-GATACAAAT--------AATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGC-ACTATAC-TGTCGG--TACCTNGCAT-G-TCAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTCGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGCCAGCTTACTTCAGTACTG-CC-C--GGT---CGG-TTAATTTAGNTGGGATAG-AC-GT--AGG-CATTCC-AA--TCCCA-CTC-TTNAT--GC--ATTGG--N-GCAGC----T-ACTACCCTTG-C-A-CAGCAAGGCATT-GC--NAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG-G----AATCGGTC-----------GCGA-ATCGGC-TA-T--A-TATC--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAAGCC-----------TT-GCGTATTTAT-TT--T-ATA--GCANAC-AT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC-GGAGCCTCCATTAAAAACAG-NACA-G-CAA-G-GGCTG-CCAGATC-CA-GGACA--GCGGGGACCAGACCTNATTAA
gi|1 : CGCATATT--TAG-C-TTGTCTAGCAATATG--CCCG-CCATT--AATAT-CTCCGGA---------AC----TTGTTCTCAT--GTCCTT-GTTG-TT-A--TT-ATGAA-AAAGG-GGG--GAGTTTTA-TGTGTGGCCCATTCT--AT-TATTCCGCG--AA--AGTTGTCATT-CCG-C-ATTG-TTCGA----AT--TG-TT-A-ACATTTTACTTAG----TCTTTTC------G-GGCCTAAT-AC-G-T-CAC---GAA-TCATGTGCTCGAA--ATTCTGC-AA-GCC-A-TGT-GGCCCAGTG---TACAATTAC-G--GCCAGGGAAAACTCTGTAATGTCCTTTGC-A-TCAACTTGAAAATCTGTTGAT------T-TA-C-C--TG-GA-TTAACT--T--TT----TTAA-TG-GCGT----TGT-C-C---T-GGTGCTGAATTATTACG-ACTAG-C-TTTA--CGTTATATAAT-GC-CCAG--AAGAA-CGAC-T-C--------TGTTGAAAGAA------GGGGAA-GGGCGTTC-AC-G-C-T-CTAA-A---CAGTCTCCC-ACGCCACAAC-C-TGGACAAGAGGAC-AA-AGCT--TGG-TGCTTAATGCGAAACACACAGCGGAACCGATGAT----CT--ATTCTCA-TC-TAG-ACCTTCATCCA-GGA-TATCCC-ATGCGGGCGGAC--TCAGCCCTACCTCAACAGCTT-TTCAC--A-CTTGACTTTCAC-AGGC-TGGCGC-ATCGCA-TC-CCG-T-AGTTGAA-GCGT--CCGCAAATCCA-TAC-TAATAA-CCAATTCTTCGCGTAGCCGAGTACAGG--TAATAC---------TAT-------TTCGCAC-AAC---G-TGCACAAATAATTATA--TTTCTCGGGGCC--CACAAA-CA-TTGCACA-T---GATGCATCA-ATTC-A-ATATGGCCC-CA--TGTTGCGCATTATT-CG--TGAATTCATAAC-CATGTTCA-TTCTA-TCATAGCCCACATTAGCCTACGTTGCCTGGTTTTGCCTG-ACATA-TA-TGCTCAG--ATACCGTC-AATTCACTCGC-GCCTGACAA-A--TTTA-CCAAATAG-GTTCAGCATAACTTAAAACAACCACTGAAA--------ACAAA-CCA-TCTTAGCCATTT-AGCCCTGGA-CGGATGCCCATTTCATAATACTA--TCTTACAT-GCATATAGGTTTGC-TGCTCAATTCATAGACAAATCAACTTTACATCTCA--AATAC-TTAAAG---GGC-G--GGGGGGGAGGGGATGCAGAAAAAGTCACAGGG-CT--TC--A--TTA-TGGCTAGCACTA-----TCTGTA-ACATTTGG-CAACACAGCACCTTAAGGCATTTGCTTTTTTTTT-AACTACAATGGGTCTTGCTATA-ATTCGCTGTGAGGTAT--CATCCCACCTTAGTCCAATCTACCAAGTTCAAAACTACGTGGAAAGTGAGGTCAAGCAGG------TGGGCCG------CCCAA-CAACACAACAATTATAAAACTTTTGGGCAGCGGGGGGATTCATAACGTAGGGTACATGAATCAATTTC-TCCTGGTTTAGTGCTGGTTAACCCTGCTGATTCTAAACTTCCA-TTTAAA-ACATGTAACAG-TTTTTATCATTGACACTGGTATTGAT-GTTGCGTTTGTG-TTATTT--TGCGACT----TTCTGAATTAACTTTTCTGCCCCCCAATGATTC-TTG-GCCTT-ACATG--TATGC---AA--TGG-GTTTTTAAT-TGACACTGACAGTAACTG-TCAACTGCTACATTTTGGTTGTGCTATTTCATGCCATCAATTTTTGAATGCTT--TATCA-TTTTCGCGGTTGGC-TAGTCATGGCCCAAATCACTGATTGACAT-GTTTCATTACT-TGGGCCGATTTTTAAATTCGC-AGCCA-T-GTGGATAGCCAGCAATTGTGATCTCC-TTATGCAT-ACATTTCA-GACTAATGTAAAT-GTGGG-TGGTG-ATGC-TAGATCTTTCAA-CCA--TG-AC--ATCTGTTCAT-----CC--CTACACAT-CTAGC--ATACATTATCCATCA-TTT--AGA-TTGACACTAATCA-ATATTTTGCCAGTA-TGATAAAACCTTTGCCGGAAGGAATTTTTAGA-----GTC--AAGGAAC--TTC----GA-TCT-GATCTTCAGAGCCTGGTGGGCAAGCCACTAAATGTTTTTTA-CAAAG-C-AT-TTCT-GCA-GC-GGG-GCGCTTCAGTTCGATTGATTTTA-GACATACACGGTT-GCGCTCCATAAGCCA-TCA-AA-T-------TATCAGAATCATTCACACAA-GCG-TTA-AGA-A-TCAATACCATAA--TCAAGTTTTTAAGAAGGCGGC-TT----------AATGT-TGTGTATTT-T--TC-TGCTTTAGTGAG-T-GA------TTCA--TA-T--ACCG-G----T-GCTGGTGGATTTAGC-T---TACTGGTTGC-GAGCTGTTA-TTTTCATGCCCGTCAA--TGGA-CCTAACTTTCAGT-GCCACAAAA-TTGGG-TC-TCATTTTCAATCTTAAAACACC-TC-A----ATACAT-TCTTTAGAACTTGCCGA-CC-CATTGCT-GC-AGC-A-TT-A-------T----CTCTA----TGGG-GTTGTAGGAGGCCATGGC-TAG--------------C-ATATATTTTCA-GTGTGCCGAATATGGCCTTAGTACACA-TTTTAACA----GATCAT-CTAACTCACATCGCG-TTATGCT-GT-CT-G-TTGCGACCACT---------------------------TCAGTTCC-AAAGCCACAACATATTCATGGGAAAAC-AATA---TCACTG---TTTCTATAGCTTA-CAAC-CAGTGGCGCTC----TCCTTCAG-CCAGCTGGC-CGCCT-A-GCCCCAGC-GT----ACAGC-CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AG-C-TCATTCAGA-GCGCAGCTTTTTTTCAT--GTGTAATAGGAC----TATTACTATTC-TCAC---GTA-AGCAT-ACACCAAATCAG-GC-AATACAGTGGCCTTTTCAAGCC-TTCTCTTACACATAT--CACACTGGATTATT--A-C-ATAT-A-TT--TTGCCCATATTTTATTCATACAAGCGATACAATA--------AATT--CAGTT-AAGCCCCTTACATTTTCTGCGATTAGTTTTTCAT-GGAAGACAG-TCAATTAGGAATCGGC-ACTATACGCGTCGGGCTACC-AGCAG-G-TCAGGTAATAACC--TCCAC-TA-------CA-GC--CAGTTACAATT-AC---C-T-GG-GGGTTTTGATCACATGAAGA-GGGCAACATATTTTGTCACTTC-CATCG-CCT--GTCCC-CTTAC-TAGTTGCCAGCTTACTTCGGTACTGCCC-C--GGTTAGCGC-TTAA-TTAGGT-GGATAG-ACTGTTCAGGCCATTTC-AA--TCCCA-CTCTTTAAT--GCCAATTGG--G-GCAGC----T-ACTACCCTTG-CTA-CAGCAACGCATT-GCTTAAAT-AAGTTATTCAAGCGCC-AGCG-T-CAATG-GCCGAAATCGGTC-----------GCGA-ATCGGC-TA-T--ACTATC--C-CCA---AG---AT------TGT---T-ATTA-TT---AAT-ATTA------------CATT-CA-TAAGCT-----------TTCGCGTATTTA------T-ATA--GCCAAC-AT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGT--TC-GGAGCCTCCATTAAAAACAGCCACA-G-CAATGCGGCTG-CCAGATC-CA-GGACAAGGGGGGGACCAGACCTCATTAA
gi|10 : GAGGAC-AA-A-CT--AGG-TG--TAATGGGA----CACAGCGGAGC-GATGGT-A--CT--AATCTC--AC-TAG-ACACTCGTCCA-GTA-CAGTCC-ATGGGGG---------AGTCC-AGCGTA-CAGCTC-A------G-CTCAACTC-CAG-AG-C-TGG-----T-GCA-GC-CCG-T-GCTTGAA--TCCGTCC-CTAATAGC-TA--TAATAA-CCAACTCT---CGGAGCCGAGTACA--------A----------TAT------------------------GCA-AAATAATTATA--TTTTTCAGGGCC--CACAAC-CA-ATACACA-T---AATG-ATCA-ATTCTA-ATCTGGTCC-CA--T--TG-GCAT-ATCATG--T----TGATAAC-CATGTCCA-TTCTAAGCATAAAT-ATATTAGT-TACATTGC-TGGTT---CGTG-ACATA-CA--G-TCAG---T-CGGTC-A----------------ACAA-AAGTTGG-CCAAAT-T-GTT--GCATAACTTAAA-CA-------------------------C--T---AGC-ATTG-AACTCTGGA-TGGATGT--ATTTCATA-TATCA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATAGACAACTCAA---TA-ATCTTA--ATTATAT-AAAATTCGAC-T--GGGGGA---------CAGAAAA-TTCACAGGG-TTGGTCAAA--TTA-TGGCGAGCACTAAGTCTTTTGTTTACATTTGG-CAAC
gi|11 : CGCATATT-CTAGCC-TTGTCTAGCA--ATG--C--G-C-ATTTAT-CCT-CTCCGGGTTTTATTTTACTCGGA-ATTCTCA-T-ATCC-TTGTTG-TT-A--TT-ATGAACAAAGG-GGGGTGGGGTT-G-T-TGTTGCCCATTC---AT-TATTCCG-G--AA--AGTT-TCATT-CCG-CAATGG-TTCGA-TAGATTGTG-TT-A-ACATTTTACTTAG----TCTTTT-------ATGT---GATAACGG-T-CACAGGAAA-TCATTTCCTCGAC--ATGCTCCGAA-GCC-ATTGT-GCT--GGT----TACAATTAC-GT-ACCAGGGAAAACCCTGTAATGTC-TTTGC-A-TAAACTTGAAAAT-TGTTGAT-AATT-T-TACC-C--TG-GA-TTAACT--T--GT--TTTTAA-TG-GC------TGT-TGCCT-TGGGTGCTGA---ATTA-GGACTGC-A-TTTA--CGTTAT-TAAT-GC-A-AG--AG--A-CGAC-T-C--------TGTTGAAGAAA----AGGGGTGG-GGGCGTTCCAC-G-C-TCCTAA-A---CAATCTCCC--CGC-ATAAC-C-TGGACTAGAGGACAAA-A-CG--TGGTTG--T-AT-GGAA---CACAGCGGGAC-GATGAT-AACTT--TTTCTCCGTC-TAG-A-CTTCAT
gi|12 : ttatT--AATCTC--TC-TAA-ACCTTCGTCCA-GTA-TATCCC-ATGGAGG--AAC--CCAGCCC-ACCGCT-AAGCTC-A--AC--A-CT-AACAC-CAC-AG-C-TGG-----T-GAA-GC-CCG-T-GCTTGAA--------------TCCG-TACCTAATAA-CCAACTTT---CGTAGCCGAGTACAGG--TAATGCACTGTTCGTTATCTTTGCCTTCACAC-AACAACG-TGCA-AAATGATTATA--TTTCTCAGGGCC--CACAAA-CA-TTACACG-T---AATA-ATCA-ATTC-AGATATCGCCC-CA--T--TG-GCAT-AT------------------------CCA-TTCTAAGCATAAAT-ATATTAGC-TACATTGC-TGATT---CGTG-ACATAGTAATGCTCAGTTAG-CTTCC-A-TTCACTCG--G---T-CAACA--TTTGGCCAAAT-T-GTT--GCATAACTCAAA-CAATCA-----A--------ACAAAACCA-C-----T-AT----------------ATGC--ATTTCATA-TATTA--T-TTACAA-GCATATATATT-GC-TGCTCA-CTCATTGACAACTCA-----ACAATTTA--A--AG-T-AAAGTTCGACTGGTGGGGGG---------CAGAAAT-GTCACAGGGTTT-GTC--AACTTA-TGGCGAGCACT------TCCATTTACATTTGG-CAAC
gi|13 : G--TACCT-GCATTG-TCAGGT-ATAACC--TCCAC-TAGGCACTACAGGC--CAGTTGCAATT-ACATGCAT-GGTGGG-TTGAATCACATGAAGAGGGGCAAT-TATTTTGTCACTTC-CA-CG-CCTCTGT-CCATTTAC-TAGTTGCCAGTCTACT-CAGTACTG-CC-CCGGGT---TGG-TTAATTTAGGTGGGATAG-CCTGT--AGA-CATTCA-AA--TCCCATCTC-T-------C--ATTGG--TTGCAGC----TTACT-CCCTTATC-AGCAGCAAGGCATTTGG--TAAT-AAGTTATTCA-GCGCCCAG-G-TTCAATGAG----GATCGGTC-----------GCGA-ATCGTC-TA-T--A-TATC--C-CCC---AG---AT------TGT---T-ATTA-TTT--AATTATTA------------TATTTCA-TAAGGC-----------TT-GCGTATTTAT-TT--T-ATATAGCATAC-AT---AC-CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCT-GGTTGTC-GG-GCCTCCATTAAAAACAG-CACATG-CAA-G-GGCAGCCCAGATCTCA-GGACA--ACGGGGACCAGACTT
gi|14 : TTA--CGTTATTTAAT-GC---AG--AA--A-CGAC-T-C--------TGTTGAAGAAA----AGGGGGAG-GGGCGTT-CACGG-C-T-CTAA-T---CAGTCT-CC-ACGC-ATAAC-C-TGGACTAGAGGAC-AATA-CG--TGG-TG--T-AT-AGAA---CACAGGCGGCC-GATGAA-A--CTTAATTCTCTGTCGTAGAACCTTCAT-TA-GGA-TATCCCAATGGGGG-GAA---TCAG--CTACCTCA-CAGCTT-T--ACAAG-CTTGACGT-CAC-AG-C-GGGCGCAAT-GCACTC-CCG-TGGCTTAAG-GTCC--CT-CAAATTCATTACTTAATA---CGATTCT---CGGAGCCGAGTACAGG--TAATA----------TAT-------TTCGCACAAAC---G-TGCA-AAATAATTATACTTTTCTCGGGACCCGCACAAA-CATTTGCACA-TTTGAATG-ATCATATTC-A-ATATGttctt
gi|15 : ATATT-TAAG-C-G-GTCTAGCA-T-TG--C--G-C--TT--C-TAT-CTCAGGG----------C----T-GTTATTGT--GTTCTTTGTTG-TT-AATTT-ATGAA-AGAGGAGGG--GGGGGT-G-T---TTGCCCATTTTAAATGTATTCGG-T--AA--AATG-TCATT-CCATC-GGGG-TT-GATT--AT--TG-TT-T-AC---TGAGTTTG----TCTGATGGAGGACG-GG---AAT-AC-GTT-CAC---GAA-TCATTTCTTAGAA--AATCTG---G-GAC-A-TCT-------GTG----AGGATTACAGT-G---GCGGAATCGTTGTAATGTA--TTGT-AGTC----TG-AAAT-TGTTTAT-A--T-G-TC-C-T--TGTGA-TTAAAC--TAAATG-CTTT-A-TG-GCTT----TAT-T-GCTAT-GGTG----------AC-GAC-AG-ATTTTATTCGT--TATGAT-G--C-AGTAAG--ATCGACGTGC--------TGTT-ATGAAA----GGGGGGG
gi|16 : tatgcaTACTTCCGTACTG-CCAC--GGT---CGC-TTAATTTAGCTGGGATAG-ACAGT--AGG-TATTTC-AAAGTCC-A-CTC-TTTAG--GC--ATTGG--C-ACAGC----T-ACTACTCTTA-C-A-CAGCAAAGCATT-GC--AAATCAAGTTATTCAAGCGGC-AG-G-T-CAATG-A----AATTGGTC-----------GCGT-ATCAGT-TA-T--A-CATT--TGCTA---AG---AT------TGT---T-ATTA-TT---AAT-A--A------------CATT-CA-TAAGCCATTGATACGCCTT-GTGTATTTAT-AT--T-ATATGGCATACCAT---AC--ATTT-----AT-------------TAAGT----TTTT-CATA-GGTCAAATTAATA-TCTGGGTTGTC-AGATCCTCCATTATAAAGAG-GACA-G-CAG-G-GCCTG-CCAGATC-CA-GGACA--G-GGGGACCAAACCT
gi|17 : gtgCGCATATTTCTAG-C-TTGTCTAGCA-GATG--C--G-C-ATT--T--AT-CTCCGGA---------AC----G-GT-CGCATT-GTCCTTTGTTGGTT-A--TT-ATGAA-AA----GGG--GGGTTT-G-T-TGTTGCCATTTCT--AT-TATTCCG-G--AATGGGGT-TCATTTCCG-C-ATGGATTCGA-T--AT--TG-TT-T-AAATTT-ACTTAG----TCGTTT-------G-GG---AAT-AC-G-T-CAC---GAA-TCATTTC-TCGAACAATTCTGC-AAAGCCGA-TGTTGGC--AGTGG--TACA-TTGC-GT-GCCAGGGAAAACCCTGTAATGTC-TTTGC-A-TCAACTTGAAA---TGTTGATGA--T-TGTA-C-C--TGCGA-TTAACT--T--TTG--TTTAA-TG-GCGT----TGT-C-CTT-T-G--CCTGAAT-A-TACGGACTAt
gi|18 : tatCGCATATT-CTAG-C-T-GTCTAGCA-TATG--C--G-C-ATT--T-ATT-CTCCGGA---------AC----G-GT-CTCATT-GTC-TTTGTTG-TTTA--TT-ATGAA-AAAGG-GGG--G---TT-G-T-TGTTGCC-ATTCT--AT-ATTTCCG-G--AA--TGTT-CCATT-CCG-G-CTGG-TTCGAAT--AT--TG-TTTA-ACATTT-ACTTAG----TCCTTTTTC----G-GGT--AAT-ACCG-T-CAC---GAAATCATTTTCTCGAA--ATTCTGC-AA-GCC---TGT-GGC--AGTG---T-CAATTGC-GT-GCCAGGGAAA-CCCTGTAA-GTC-TTTGC-A-TCAACTTGAAAAT-TGTTGAT-A--T-T-TA-C-C--T--GA-TTAACT--T---TG--TTTAA-TGCGCGT----TGT-T-CCT-T-GGTGCTGAAT-ATTACGGACTA
gi|19 : tatC-AG-GAT-CAATG-G----AATCGGTTCAGTTCTCTAAGCGA-ATCGGCCTA-TTAA-TATCTAC-CCGTAGAG---ATAATGGGTGTATAT-ATTC-TCTACAAT-TTTATTCTATAACGACCCTT-CA-TAAGCT-----------TT-GCGTA-TTAT-TTA-TGATA--GATGAC-ATTACAT-CATTCTTCCAATTTCACCACCTTAATAAGTATACTTTTGCACAGGGTCAAATTAATAATa
gi|2 : CGCATATT-CTAG-C-TTGTCTAGCA-TATG--C--GAC-ATT--T-TAT-CTCCGGA---------AC----T-GTTCTCATT-GTCCTTTGTTG-TT-A--TT-ATGAA-AGAGG-GGG--GGAG---G-C-TGTTGCCCATTTT--AT-TATTCCG-GATAA--AGTT-TCATT-CCG-C-ATGG-TTCGA-T--AT--TG---------TTTTACTGAG----TCTTTTTCTGTGCG-GG---AAT-AC-G-T-CAC---GAA-TCATTT-CTAGAA--AATCTGG-AA-G-C-A-TGT-TGC--AG-GAATTACAATTGC-GT-GCCA-GGAAAACCCTGTAATGTC-TTTGT-G-TCAACTTGAAAAT-TGTT-AT-A--TGT-TA-C-CTTTG-GATTTAACTAAC--ATG-CTTTTA-TG-GCTT----TTTGT-CAT-T-GGTGCTGAAT-ATTACGGACTAGCATTTTA--CGTTAT-CAATGGC-C-AGA-AG--A-CGAC-T-C--------TTGTGAAGAAAAGGTAGGGGGGG-GGGCGTTCCAC-A-CTT-CGAATA---CAGTCTCCCAACGC-ACAACAC-TGGACTAGAGGAC-AA-A-CGTTTGG-TG--TAATTGGAA---CACAGCGGACC-GATGATGA--CT--ATTCTC--TC-TAG-ACCTTTATCTACAGA-TATCCC-ATGGGAG-GAAC--TCGGCCTAACCTCA-CAGCTT-A--CC--GTCTTGACTT-CAC-AG-C-T-GCGC-AT-GCA-TTACCGAT-GCTTGAAGGTTC--CT-CGAATCCA-TAGCTAATAACCCAATTCT---CGGAG-CGAGTACAGGTTTACT-----------TAT-------TCGACAC-AAC---GTTGCA-ATA-AAATATA---TTCTCGGGGCC--CACAAACCA-TTGCACATT---GATG-A-CA-ATTC-A-ATATGGCCCACATGT--TG-GC---ATT-CGGTT----TCATAACTTGTGTTCATTTCTATGCATAG-C-ACATTAGC-TTTGTTGC-TGGTT---TGTGCCCATA-TA-TGCTCAG--AT-CCGTCAA-TTCACTCGGTG---GACAA-A--TTTA-CCAAAT-TGGTT--GCATAACTTAAA-CAACCA-----ATCTTGAATACAAA-CCACT---AGC-ATTTAAGCCCTGGACCGGATGC--ATTTCATA-TACTATCT-TTACCATGCATATAGGTT-GCATGCTCA-T--------------A-TTTACATCTCAACATTACTT-AAAG-GCG---G--GGGGGG---------CATAAAA-GTCACAG------GTC--A--TTATTGGCTAGCACT------TCTG-TTACATTTGGCCAACAC-GCACCTTAGGGGCTTTGTTTTTTTTTTTAACTACAATGGGTC-TGCTATAGATTCG-TGT-AGGTATTTCAT-CCACCT--GT-CAATCTAC--------------CGTGGAAA-TGGGGTCAAGGGGGGGGGTGTGGGGGGGGGGAACCCAAACAACAC-ACAA--ATTCAAC-TTTGGGCA---GGGGGGTTCATAACGTA-GGTACATAAATCAATTTCATTTTGG-TTAGTGCT-GTAAACCCTGCTGATTCTAAACTTCC-ATTTAAATA-ATGTAACAGTTTTTTA-CATTTACACTGCTTTTGATGGT-G-GTCTGTGTTTATTTCCT--GGCTATGATTCTGAATTAAC--T-CTG--CCT-AATGATTCTTTGTGC-TTGGCATGACTATCTTATGATTTGGTATTTTGTAT-TGACACTGACAGTAACTGTTCA-CTGTT-CATTTTG--TGTGCTA-TTCATG-CATAAA--TTTGAATG-TT--TATCA-TTTTCG-GGT-GGCTTAGTCATGGCAT-AATCACTGATTGA-AT-GTTTCATTA-T-TGGGC-AATT----------------A-T-GTG-----------------ATCTTC-TTATGCAT-AC-TTTCA-GACTAATGTAATT-GTGGG-TGGTG-AT-G-TAGATCTTTCAA-CCATTTG-AC-AATCTGTTCAT-----TC--CTACACAT-CTAG---ATACA-TATCC-TCATTTT--ACATTTGACACTAATCA-ATAT-TTG-C-TTATTG---ATACCTT----GG--GAA---TTTAGG-----GTC--AAGGAACT-TTCT---GA-TCTGGATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-CTAG-TTCTGGCAGGC-GGGTGCG-TTCATTTCG-TAGATGTTACAACAT-CACGGTT---G-TCC-T-AGCCACTCA-CA-CTATTAATTATCAGAATCATTCACACAATGCGTTTA-AGACA-TCAATA-CCT-ACGTCAAG-TTTTAAGAAGGCGGCTTT----------AATGT-TGTGTATTTCT--TCTTG--TTAGTGAGTTGGA------TTCA--TG----A-CGCG----TCGCTGGTGGATTTAGCTT---TA--GGTGGC-GAG-TGTTA-CTTTCA
gi|20 : atatAAT-GC-C-GG--AG--A-CGAAAT-C--------TGTTGAAGAAA----AAGGGGGGAGGGCAATC-AC-G-C-T-AAAA-AGCACAGTCTCCC-ACGC-A---C-CATA---TCGAAGAC-AA-A-CT--AGG-TG--TGTTGGGA----CACAGCGGAGC-GATGGC-A--CT--AATCTC--TC-Tt
gi|21 : aagTTGTC-AGATCCTCCATTATAAAGAG-GACA-GTCAA-A-GGGTG-CCA-ATC-CA-G--CA--GCGGGGACCAGACTTAAT
gi|3 : ATTCTAAACTTCCAATTTAAATACATGTAACAG-TTTT-A--ATTTACACT--TCTTGAT-GT-G-GT----G-TTATTTCCTGCAG-----ATTCTGAAT-AACTT--CTGCC----AATGATTC-TTG-GC-TT-GCATA--CATG-TATGA--TGG-GTTTTTTATATGACACTG-------------------TACATTTTGGTTGTGCTATTTCATGC-ATCAATTTTGAAATG-TT---ATCA-TTTTCG-GGT-GGC-TAGTCATG---CAAATCACTGATTGACAT-GTTTCATTA-T-TGGGC-GATTTT-AATTTCGC-AGCCA-T-GTGGATAGC-AGCAATTGTGATCTCC-T-ATGCAT-ACATTTCA-GACTAATGTAATT--TGGG-TGGTG-ATG--TAGATCTTTCAA-CCA--TG-ACCATACTGTTCATT----CC--CTACACAT-CTAGC--ATA-A-TATCC-TCA-TTT--TAA-T-GACACTAATCA-ATA--TTG-CATTA-TGA---TACCTT----GG--GAAATTT--AGG-------C--AAGGAAC--T-CT---GA-TCT-GATCTTTAGAGCCTGGTGGGCAAG---CTAAATGTTTTTTA-CAAAG-C-ATATTCTGGCA--C-GGG-GCG-TTCATT-CG-TG----TTACAACAT-CACGGTT-G-G-TCC-TAAGCCA-TCA-CA-C-A-----TATCAGAATCAT---CACAATGCG-TTA-AGACA-TCAATA-C-T-AG-TCAAG-TTTTAAGAAGG-GGC-TT----------AATGT-TGTGATTTT-T--TC-TG--TTAGTGAG-TGGA------TTCA--TGTT--A-CG-G----T-GCTGGTGGATTTAGC-T---TA--GGTTGC-GAG-TGTTA-TTTTTCAG---GTCAA--TGGA-CT--ACTTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCA--TTT-AAACACC-TC-A----ATACAT-T-TTTAGAACTTGT--A-CC-CATTG-T--CTAGC-T-ATAT-------T----CTCTA-----GGG-GTTGTAGGAGG-CATGGC-TAG--------------C-ATATA-TTTCATGTGTGC--AATATGGCCTTGGTACACATTTTTAACA----G-TCATACT------CATC-GG-TTATGTG-GT-CT-G-TTG-GACCACT---------------------------TCAGTT-C-AAAG-CACAACATATTCATGG-AAAAC-AATAA--TC-CTG---TTTCTATAGCTTA-CAAC-CAGTGG-G-TC----TCCTTCAG-CCAGCTGG--C-CCT-A-G---CAGC-GT----ACAG--CACAACAC-AAC---CCT-CAGC---TAC-TCA-T----AGCC-TCA-TCAGA-G-GCAGC--TTTTTCAT--GTGTAATA-GAC-----ATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTTTTCA--CCTTTCTCTTA-ACATAT--CACACTGGG-TA-T--A-C-ATATAA-TT-ATTG--CATA-TTTATTCATACAAG-GATAC-AAT--------AATC--CAGTT-AAG---C-TACA-TTTCTGCTATTAG-TTTTCAT--GAAGACAGTTCAATTAGGAATCGGCAACTATAC-TGTCGG--TACCTTGCAT-GTTCAGGT-ATAACC--TCCACATA-------CAGGC--CAGTTAC-ATT-AC---C-T----GGG-TTTGATCACATGAAGAGGGGCAAC-TATTTTGTCACTTC-CA-CG--CT--GT-CC-CTTAC-TAGTTGCC-GCTTACTTCAGTACTG--C-C--GGT---TGGTTTAATTTAGG-GGGATAGTAC-GT--AGG-CATTCC-AA-----CA--TC-TTAAT--GC--ATTTG--G-GCAGCTACAT-ACTACCCTTG-C-A-CAGCAAGGCATT-GC--TAAT-AAGTTATTCAAGCGCC-AG-G-T-CAATG-G----GATCGGTC-----------G-GA-ATCGGC-TA-T--A-TATC--C-CCA---AG---AT------TG----T-ATTATTT---AAT-ATTA------------CATT-CA-TAAGCT-----------TT-GCGTATTTAT-TT--T-ATA--GCATAC-AT---A--CATTC-----AT-------------TAAGT----TTTT-CACA-GGTCAAATTAATAATCTGGGTTGTC--GAGCCTCCATTAAAAACAG-CACA-G-CAA-G-GGCTG-CCAGATC-CA-GGACA--A-GGGGACCAGACCTCATTAA
gi|4 : TAAATG-TTATCATCAATTTTAG-AGT-GGT-T-GTCATTGCA-AAATCAGTGATTGA-ATCGTTTCATTA-CATAGGC-GATTTC-ATTTTTGC-AGACAGT-ATGTATATC-AGCCATTGTGATCT----TATGCAT-ACATTTCA-GTCTA-TGTCATT-GTGTG-TTGAG-ATGGGTATACCTTTGAA-CCA--TG-ACAAATCTGTTTAA-----CCTGCTACATGT-TTA------ACA-TTTCT-TCG-TTTGGAGA-TTGACACTAATCA-ATA--TT--CAT-A-TGAGAATACCTT----GG--GAAATTT---AG-----GTC--AAGGAAC--TTCT---GAATCT-GATCTTCAGTGCCTGGTGGGCAAG---ATAAATGTTTTTAG-CAAAGCC-AT-TTCTGGCA-GC-AGG-GCG-TTCAGTT-G-TAGATTTTACAACGC-CAGGATT-G-G-ACT-TAAGCCA-TCA-CA-TCA-----TATCAGAATCATTTACATAATGCG-TTA-AGACA-TAAATA-CATGG--TTAAGGTTTT-AGAAGG-GAT-TTTTATTGGTNNNNNNN-NNNNNNNNN-N--NN-NN--NNNNNNNN-NNGAACCCCCTGCAACTG-TTCA-CG-GACAGT-GCTGTTTGATATAGC-C---TA--GGTTGC-TCG-TGTTA-TTTTAAAG---GTCAA--TGGGCCT--AGTTTCAGTGGCCACAAAA-TGGGG-TCTTTAC-TTCAATCTTAAAG-ACA-TT-A----TTACGT-T-TTTAGAACTTGT--A-CC-CATTG-T-GCTAGC-T-GT-T-------T----CAGTA----TGGG-GTTGTAGAAGG-CAAAACATAA--------------C-ATATA-TTTCATGTGTGC--AATATGACATTCTTA-ACA-----AACA----G-TCAT-CTAAATCACATCGGG-TTATGTG-GT-AT-G-TTA-GACCACTTATCATTGTGTCTTTACACTCAAATATTCAGTT-C-AAAG-CACAACATATCCCTGACAAAACGAATAAATTC-CTG---ATTCTACATCTTG-CAAA-CAGTAG-A-TT----TTGTTCAG-GCAGCTGG--TGCCT-A-G---CGGC-CT----ACAG--CAGACCAT-AAC---CCT-CAGC---TTA-TCC-T----AGCT-TCATTCAGG-G-GCAGC--TATTTCAA--GTGT--TA-CAT----T-TTA----TCGT--T---GTA-AGGAA-ACACCAAAG-AA-GCATATACAGTGG-CTATTCAGGTATTTCCCCTA-ACACAT--GACACTGGA-TATT--A-CAATAC-ATTT-ATTG--CATA-TTTATTCATACATG-GATACGAGT--------AATC--CAGCTAAAA---CATACA-TTTCTGCAATTAG-TTTTCAT-TGAATACATATCTATTAGGAATCGGC-ACCATAC-TGTCGG--TACTAAGCAT-G-TTAGGA-ATAATTTGTCCAG-TT-------CAGGC--CAGGGATAATT-AC---A-TGGG-GGG-TTCGATCACAGAAAGCGGGATAAC-TATTTTGTCACTTCTCA-GT-TCC--G--CT-CTTAA-TCGTTGCCAGTTTATTCCCGTACTG-TCAC--GGT---CGC-TTAGTTTAGCTGGGATAA-ACAGT--AGG-TATTTCAAA--TCCCA-CTC-TTTAT--GC--ATTGG--C-GCAGC----T-ACTACGCTTG-C-A-CAGTAAGGCATG-GA--AAATCAAGTTATTCAAACGGT-AA-G-T-CGATG-A----GATCGGTC-----------GCGA-ATCAGT-TT-T--A-CATC--CGTTA---AG---AT------TGT---T-AT----------T-ATTA------------CATT-TA-TAAACC-----------TT-GTGTATTTATATTG-T-ATA--GCAAAC-GT---AA-CGTTC-----AT-------------TAAAT----TTTT-CACA-GGTAAAATTCAT-ATCTGGGTTGTC-AGATCCTCCATCAAAAAGAG-AACA-G-CTA-G-GGCTG-CAATATC-CA-GGACA--G-GGAGACCAGACCa
gi|5 : --TTCT---GA-TCT-GATCT-CAGAGCT--GCGGGCAAGT--CTAAAT---TTTTAGCAACC-T-AT-TTCTGGCA-GC-AGG-GCG-TTCATT-CG-ATGATTT-ACAACA--CACTGTT------TC-TAAGCCA-TCA-CATCTA-----TATATGTATCATTCACACAATGC--TTAGAGACA-TCA-TA-CAT-A--TCAA---TTTAAGAAGG-G-C-TT----------AATGTGTGTGTATTT-T--TC-TG--TTAGTG-G-TG-A------TTC---TG----A-CA-G----------GTGGATT----------A--GGTTGCCGAG-TGTTA-TTT-CATG---GTCGA--TGGA-CT--ACTTCGAG---CTACAAAAGTTGGGGTCTTC-CTTTCA--C-------ACC-TCGA----ATACATCT-TTTAGA-CTTGT--AGCC-CATTG-T-GTTAGCCT-AT-A-------T----C-CTA----TGGGCGTTGTAG-----CATGGC-TAG--------------C-AT-TA-T---ATACATGC--AATATGGCCTTTGAACA--------ACA------------TAAACCAC---GGT-TTATGTAAGTACT-GGTTT-GATC-------------------CACT-------TCAGTT-CCAAAG-----ACACA--CA-GGAAAACC-AATAA-TAC-CTG---TTTCTATAGCTTA-ACACACAGTGG-GGTCCAACTCCTTCAGACTGACTGGACCGCCTCATG---CAGCCGTCACTACAT--CATAACAC-AACACACCT-CAGCGACTAC-TCAAT----AGCC-TCAT-AAGA-G-GCAGCTTCTTTTCAT--GTGTAATA-GACG---TATTACAATTC-T--C---GTA-AGCAT-ACACCAAAT-AG-GCAAATACAGTGG-CTCTTCAAGCATTTCTCTTA-ACAAAT--CACACAGGA-TA-A--AAC-ATAT-A-TTGATTG--CATA-TT-GTTCATACAAG-GATACAAATATTGAAATAATC--CAGTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCAT-GGAAGACAGTTCAATTAGGAATCGGC-ACTATAC-TGTCGG--TACCTGGCAT-G-TCAGGT-ATAACC--TCCAC-TA-------CAGGC--CAGTTACAATT-AC---C-T-GG-GGG-TTTGATCACATAAGGAGGGGCAAC-TATTTTGTCACTTC-CA-CG-CCT--GT-CC-CTTAC-TAGTTGTCGGCTTACTTCAGTACGGCCC-C--GGT---TGG-TTAATTTAGGTGGGA---------------CATTCC-AA--TCCCA-CTC-TTAATGAGC--ATTGGCTG-GCA-C----T-ACTCACCTTG-C---CAGCAA-GCATT-GCT-AAAT-AACTTATTCAAGC-CC-AA-A-T-CAATG-G----AATC-GTCAGA--------GCGATGTC--T-TACT--A-TAT---C-CCA---AGC--AT------TGT---TCATTA-TT---
gi|6 : ccaGGGC-G-CTTTTAATTTCGCTAGCCA-TTGTGGATAGC-AGCAATGGTGATCTCCCTTATGCATGACATT-CATGACTAATGTAATTTGTGGGGTGGTGGATAG-CGAATCTTTCAAACCA--TGGACAAATCTGTTCATAGTTCCC--CTACACATGCTAAGGCATGCA-TATCC-TCA-TTTT-AGA-TTGACACTA-TCATAT---TTG-CATTA-TGA-A-TACCTT----GG--GGAAATTTTAGGTCAAGGTCTTAAGGAAC--TTCCTGAGA-TCT-GATCTT-AGAGCCTGGTGG-CAAG---CTAA-TGTTTTT-A-CAAAA-CCAT-TTCTG-CA-GCAGGG-GCG-TTC-TTTCG-TTGATTT-ATAACAT-CACGGTTTG-G-TCC-TAAGCCA-TCAACA-CTA-----TATCAGAATCCATCACACAATGCG-TTA-AGACAATCAATA-CAT-A--TCAGGTTTTAAGAAAGG-GGC-CT----------AATGT-TGTGTATTT-TTTTC-TG--TTAGTGCG-TGGA------TTCG--TA-T--A-CG-G----T-GCTGGTGGATTTAGC-TTACTA--GGTTGC-GAG-TGTTATTTTTCAGG---GTCAATGTGGA-CCTGAATTTCAGTGGCCACAAAA-TTGGG-TCTTCACTTTCAT-CTTAATACACCATC-AATTTATACA--T-TTTAG-ACTTGT--A-CCGCATTG-TGGTTAGC-TAAT-C-------A----CTCTA----TGGG-G-TGTTGGAGG-CATGGC-TAG--------------CAATATATTTTCATGTGTGCA-AATATGGCCTTGGTACACATTTTAAACA----G-TCAT--------ATATCGGGTTTATGT--GT-CTGG-TTT-GACCACTT----------------------------AGTT-C-AAAG-CACAACATATTCATTGG-ACAC-CAT-AATAC-CTGTTCTTTCTTAAGCTTA-CAACGCAGT-G-G-TC----TCCTTCAG-CCCACTGG--CGCCT-A-G---CAGC-GT----ACAGCACAGAACAC-AAC---CCTGCAGCT--TACTTCA-TGCAGAGCC-TCA-CCAGAGG-GCAGC--TTTTTCATTGGTGTAAT
gi|7 : AAACC-AATAA-TTC-CTG---TTTCTATAGCTTAACAAC-CAGTGG---TC----TC-TTCAG-CCAGCTG---CGCCT-A-G---CAGC--T----ACAG--CA-AACACTAAC---CCT-CAGC---TAA-TCA-T----AGCCCTCATC--GA-G--CAGCTTTT---CAT--GTGTAATA-GAC----TAT-ACAATTC-T--C---GAAGAGCATTACACCAAAT-AAAGCAAATACAG-GG-CA--TCAAGCCTTTCTCTTA-ACATAT--CACAC-GAA-T--T--A-C-CAAT-A-TT-AT-G--CATC-ATTATTCATACAAG-ATTACAAAT--------AATC--CATTT-AAG---CGTACA-TTTCTGCTATTAG-TTTTCATCGGAAGACAGTTTCATTAGGAATCC-C-ACTATAC-TGTC----TACCTCGGAC-A-GTAAGT-ATAACC--TCCAC-TA-------CAGGTTTCA-TTACAATTCAC---C-T-GG-T---TTGGATCACATGAAGAGGGACAAC-TATTAT-TCACTTC-CA-CGGCCT--GT-CC-CTTACCTAGTTGCCAGCTT--------ACT----------T---CAG-T-AAT-----------------GT--AGG-CATTCC-AA--TCCCA-CTC-TAACT--GC--ATTGG----GCA-C----T-ACTACCCTTG-C-A-CAGCAAGGCA-T-GC---AAT-AAG-TA-TCAAGCCCC-AG-G-T-CAA---G----A--CGGTC------------CGA-ATC-GC-TA----A-TATC--C-CCA---AGTAAAT------T-T------TTA-TT---AAT-ATTA------------CATT-CATTAGGCT-----------TT-GGGTATTTAT-TTACT-ATA--GCA-AC-AT---ACACACTC-----AT-------------TAAGT----TTTT-CACA--GTCAATTTAATAATCT-GCTTGTCTAGAGCCT-CATTAAAAACAG-CACA-G-C-A-G-GGC-G-CC-GATC-CATGGACA----AGGGACCAGACCTAATTAA
gi|8 : CGCATATT-CT-G-CATTGTC--GC--TATGTCC--G-C-ATT--T--ATGCCCTGGA---------AC----T-GTCCTCATTCGTCCTT-GTTG-TTTA--TTTATGAA-AAAGG-GGG------TT-GGT-TGTTGCCCATTCT--AT-TATTCC--G--AA--AGTT-TCA-T-CCG-C-AT-G-TTCGA-T--AT--TGTTT-ATACATTTTACTTAGCGTTTTTTTT-------A-TG----AT-AC-G-TCCAC---GAA-TCATT--CTCGAA--AT----C-A----C-A-CGG-GGA--A-------AC-ATTAC-GTGGCCAGGT-AAACCCT-TAATGTC-TTTGCGA-TCAACTTGAAAAT-TG-TGAT-A--T-TGTA-CTC--TG-GATTTAACT--T--TTGCCCTTAATTA-ACACAAAATG--------T-G--GCTGAAT-A--A-GAGCGAG-----TA--CGTATTAT-AT-GCGC-AG--AA--A-CGAC-T-CCCACACCGCGGCGCGCCGA----AGGGGGGG-GG----TTCAC-GAC-T-CT-A-A---CAG---CCC-ACGC-ATAAC-C-T-GACT--AGGAC-AA-A-AG--TAG-TG--T-ACGTGAA---CA-AG-GGGAC-GAT-AT-A--CT--ATTATC--TC-AA------TCATCCA-GGATTATCCC-AATGGGG-GAACTTTCAGCCCTACCTCA-CAACACTT--AC--A-CTTGACTTCCACTGG-CGCGGCGC-AT-GCA-TC-CCG-T-GCTTGAA-GTCC--CCTCGAA-CCA-T-TCTGAT---CTGA-TCT---CAGAGCTGCGGGCAAG--T
gi|8 : atatttGAACCATTCT---GA-TCT-GATC-TCAGAGCT--GCGGGCAAGT--CTAAATTTTTctaaatttttagc
gi|9 : atatttcgcatattctgcattgtcgctatgtccgcatttatgccctggaactgtcctcattcgtccttgttgtttatttatgaaaaagggggttggttgttgcccattctattattccgaaagtttcatccgcatgttcgatattgtttatacattttacttagcgttttttttatgatacgtccacgaatcattctcgaaatcacacggggaaacattacgtggccaggtaaacccttaatgtctttgcgatcaacttgaaaattgtgatattgtactctggatttaacttttgcccttaattaacacaaaatgtggctgaataagagcgagtacgtattatatgcgcagaaacgactcccacaccgcggcgcgccgaagggggggggttcacgactctaacagcccacgcataacctgactaggacaaaagtagtgtacgtgaacaaggggacgatatactattatctcaatcatccaggattatcccaatgggggaactttcagccctacctcacaacacttacacttgacttccactggcgcggcgcatgcatcccgtgcttgaagtcccctcTACAT-T-TTTAGACCTTGT--A-CC-CATTG-T-GCTAGC-T-AT-TGTAGGAGTGGGATTGTAGGAGTGGG-ATTGTAGGAGG-CAAAAC-AAAAAACAAAACAAAAAC-ATATA-TTTCATGTGTGC--AATATGGCCTTAGTACGCATTCTTAACAAAGAG-TAAT-CTAAATCACATCAGA-TTATGTG-GT-CT-G-TTA-GACCACTTATCATTGTGTCTCTACACTCAAATATTCAGTT-C-AAAG-CACAACATATCCCAGGTAAACC-AATAAATTC-CTG---ATTCTATATCTTG-CAAA-CAGTGG-G-TC----TCGTTAAG-GCAGCTGT--TGCTT-A-G---CGGC-CT----ACAG--CAGACCAC-GAC---CCT-CAGC---TAC-TCC-T----AGCT-TCATTCAAA-G-GCTGC--TTTTTCAA--GTGTAATA-GACCATTTATTACAATTG-T--CGTTGTA-AGTAA-GCACTAAAG-AA-GCATACACAGTGG-CTATTCAGGCCTTTCCCCTA-ACATATGGC-CACTGAA-TA-TTGA-CAATAC-ATTT-ATTG--TACA-CTTATCCATACATG-AATACAAAC--------AATCCACAGCTAAAA---CATACA-TCTCTGCTATTTG-TTTTCAT-agc