lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111                                                                                                                                             222222222222222222222222222222222222222222222222222                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          111111111111111111111                                                                                                                                   11111111111111111111111111                                                                                                                                                                                                                                                                                                                                                                                                             11111111111111111111111111111111111111111111111111111111                                                                                                                                                                                                                                                                                                                                         1111111111111111111                                                                                                                                                                                                                                                                                           111111111111111111111111111111111111111                                               1111111111111                                                                                                                                                                                                                                                                                                   
lowQualScore                  :                                                                                                                                                                                                                                    11      1   1            2222    333333333333                1111             3333                                  1           111                                                             111                            1                                                       111   1111111          11          1       1         1  1 1        1                 11        11                  77777777777777777777          22222         1    1         222         111           22    33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333      22222    1      222        22222     11    2        1   11                1     333       66666666666666666    1    33             2   111111111111111111111111111111111111111111111111111             11       1111           1          111      2   88888888888888888888888888888888888888888888888       333333    222        33333   1        1          555555555555555555    2222222222                          11         1        2222      1  11        11                  1        11                   2         2                  2  1    22      1            22           2                             1     1           1      6666666666666666666666     22222    22           111111111111111111111    222            1           1                        1      1           1       2222  111111          444      1   22       1   00000000000000000000000000                  22     2         1                         2      22                   1    111               111      1                          1       2       2     2       22            1               1     11           1            33          444444444444444444444          22222     555555555555555            111    444444      1         9999999999999999999999999999999                 22222222222222222222222222222222222222222222222222222222    1        1          1   1      1               3333    1  2222      1111           2  1   111       33        3333333        33333     11             11                 11        11         1   1         333333333   1  111   1111         1  1          666666666666666666666666666666666666666666666         44444        22    5555555555555555555    1    11   1  4444444444444444444444       1  2222222    2             11         11               2  1                  1  44444444444        66666666666   111           222      77777777  1           1   2            1    1   1                 11             2222222            222222222222222222222222222222222222222       11   2      222   1     3333   111      0000000000000                  5555555555555555     11       333333333               2222  11           1        333    2     44444444444     5555555555555555555555     1              2     1           1  1           1         2          1      333333333    22222              1          2            1  
lowQualScore                  :                                                                                                                                                                                                                        88          33  00  0   5  99  6     0000    888888888888  6 3       0   0000     3  8    0000 6         1           3     0    0           555         8        6           6                     2        111  1           99  1         1            1                   99       0             666   6666666    0     33          0  0 0  5  2      0  0 0   2    0        2        33 3      00                  22222222222222222222          66666 0       3    3         333         999     3 7   00    99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999      99999    5      000    3   88888     55    8        6   88    7           5  7  444       22222222222222222    3    11         2   0   000000000000000000000000000000000000000000000000000     1       00  3 6  9999   6       3          222      0   99999999999999999999999999999999999999999999999       444444    333     44 55555   3  3  1  3  44      111111111111111111    5555555555  3  6       77777        44      8  0        1111      0  33   66 2 33  2  88   4       5        44                   0         0       6          0  5    33      5            77       6   0                 6         1 3     3  6   7    2      1111111111111111111111     99999    00   9       333333333333333333333    333            3           3                        3      3 77        3       8888  888888          111      3   00       7   88888888888888888888888888        2   6     33     0  2 3    7 4     4  2  444   2  6  0      77   6666        6   3    777  6 6          999  0 7 5      6                   5       0       0     8    11 22   6        3    1  7       5     66  6        7            22     7    222222222222222222222     2    00000  0  222222222222222            888    222222  1   3   7  9  6666666666666666666666666666666     11     6    11111111111111111111111111111111111111111111111111111111    0        5   7   8  0   0    6 3  999  7     6 0000 0  3  0000 7    7777     1  8  3  3   555   8   66 0  6   5555555    6   55555     44     6  7  0 88 0     6  1  6   88  6     66    7 77 2   6  6      444444444   3  777 0 5555         2  3 6 6      999999999999999999999999999999999999999999999   1     00000 6      77    5555555555555555555    5    22   5  0000000000000000000000       7  9999999 6  0          6  33  6   4  66      6      6 0  7   4       6      0  55555555555        77777777777   888      6    777      22222222  5           5   0      3 6   0    0   5        66 8     44 0      1    2222222    2       777777777777777777777777777777777777777       00   8      222   0     4444   666    0 4444444444444   5           6  8888888888888888     99       555555555     77     3  1111  11           5  66  2 111    0     55555555555     8888888888888888888888     5 2      6   2 0     2     2     5  5      6    5  6      0          5   2  777777777    88888              5          0    6       7  
lowQualScore                  :                                                                                                                                                                                                                        ..          ..  ..  .   .  ..  .     ....    ............  . .       .   ....     .  .    .... .         .           .     .    .           ...         .        .           .                     .        ...  .           ..  .         .            .                   ..       .             ...   .......    .     ..          .  . .  .  .      .  . .   .    .        .        .. .      ..                  ....................          ..... .       .    .         ...         ...     . .   ..    .........................................................................................      .....    .      ...    .   .....     ..    .        .   ..    .           .  .  ...       .................    .    ..         .   .   ...................................................     .       ..  . .  ....   .       .          ...      .   ...............................................       ......    ...     .. .....   .  .  .  .  ..      ..................    ..........  .  .       .....        ..      .  .        ....      .  ..   .. . ..  .  ..   .       .        ..                   .         .       .          .  .    ..      .            ..       .   .                 .         . .     .  .   .    .      ......................     .....    ..   .       .....................    ...            .           .                        .      . ..        .       ....  ......          ...      .   ..       .   ..........................        .   .     ..     .  . .    . .     .  .  ...   .  .  .      ..   ....        .   .    ...  . .          ...  . . .      .                   .       .       .     .    .. ..   .        .    .  .       .     ..  .        .            ..     .    .....................     .    .....  .  ...............            ...    ......  .   .   .  .  ...............................     ..     .    ........................................................    .        .   .   .  .   .    . .  ...  .     . .... .  .  .... .    ....     .  .  .  .   ...   .   .. .  .   .......    .   .....     ..     .  .  . .. .     .  .  .   ..  .     ..    . .. .   .  .      .........   .  ... . ....         .  . . .      .............................................   .     ..... .      ..    ...................    .    ..   .  ......................       .  ....... .  .          .  ..  .   .  ..      .      . .  .   .       .      .  ...........        ...........   ...      .    ...      ........  .           .   .      . .   .    .   .        .. .     .. .      .    .......    .       .......................................       ..   .      ...   .     ....   ...    . .............   .           .  ................     ..       .........     ..     .  ....  ..           .  ..  . ...    .     ...........     ......................     . .      .   . .     .     .     .  .      .    .  .      .          .   .  .........    .....              .          .    .       .  
lowQualScore                  :                                                                                                                                                                                                                        55          88  55  0   0  44  8     4444    000000000000  0 8       6   8888     2  0    0000 0         4           0     2    0           555         0        0           7                     5        777  0           22  0         0            0                   44       8             000   0000000    8     00          0  2 2  0  5      0  0 0   5    0        5        88 2      22                  00000000000000000000          77777 7       3    3         333         777     7 3   00    77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777      00000    0      333    7   33333     77    7        0   33    3           7  3  000       77777777777777777    3    77         5   0   333333333333333333333333333333333333333333333333333     0       33  7 7  0000   7       3          333      3   00000000000000000000000000000000000000000000000       333333    333     77 00000   3  7  0  3  77      777777777777777777    0000000000  7  7       33333        33      8  0        2222      0  88   00 5 88  5  55   5       0        00                   0         0       0          0  0    00      5            55       0   0                 0         0 3     3  7   3    0      3333333333333333333333     00000    00   0       333333333333333333333    333            3           3                        3      3 77        3       3333  000000          333      3   00       0   77777777777777777777777777        5   0     00     0  5 0    0 0     0  5  000   5  0  0      55   5555        7   3    777  0 7          000  7 3 0      7                   0       0       0     5    77 33   7        3    0  3       0     33  7        0            33     3    777777777777777777777     5    00000  7  777777777777777            000    000000  0   3   7  0  0000000000000000000000000000000     77     7    00000000000000000000000000000000000000000000000000000000    0        0   0   8  0   0    7 3  333  0     0 7777 7  3  3333 0    3333     0  3  7  3   333   3   77 7  7   3333333    7   77777     00     7  7  7 33 7     7  0  0   33  7     33    7 77 0   0  7      000000000   3  333 7 0000         0  3 7 7      000000000000000000000000000000000000000000000   0     33333 0      55    5555555555555555555    0    00   0  0000000000000000000000       0  5555555 0  0          0  00  0   0  55      0      0 0  0   0       0      5  00000000000        00000000000   000      0    000      55555555  0           0   0      0 0   5    5   0        77 3     00 7      0    0000000    5       888888888888888888888888888888888888888       33   7      000   5     5555   222    2 0000000000000   0           0  2222222222222222     44       222222222     22     2  2222  22           5  55  5 000    0     55555555555     5555555555555555555555     0 5      0   5 0     3     5     0  5      0    5  0      0          0   5  555555555    55555              5          0    0       0  
consensus                     :                                                                                                                                                                                                                   ATAGGTNGAGTAGAGGT--CGGCGTNCTGCTCC-TGGCACTT--TTCCTGTA-GCTGNCTGGCGGCGAATATCATGTCCGTTGTCCCGCG-TTCTGC-GCGGAAGCCACACTGGCTCTCAGGNAGGAGGCCTT-GCTCGAGGTGCTCGATAAGGCGG-TTGAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGAT---TCCGCGATGATTGT--CGCAGACTTGGCGGTTTCCTTTGCGCTTGTAGAGGTGGACGATGGT-GGCGTCCTTGAAGTCCTGTGGC--ACT-G-T---CTCGTGCTGCCAGATGAGCTGA-AACAGCTCGTGAAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCCTTGTAGATTTCAGC-GGGATGGAATCCGAACCGGG-G-A--TTT-C-C-ACT-GAAAGTAGTC-G---GACTGCTTT-CTGA-ATCTCATCC---GAGGTGGGTGGGGCGTCNATGGTC-TCTTCG-ACAGGG---AC-T-TGGGGT---GCCTGTCGATNG--CAT---C-ATCGTTGATG-GTG-GAAGTCCTGTTCAGGA--CGC--TNTCGAAATGTTCCCGCCCATCTCT-CAAAACNTTTCC---TTGTCGGTGAT-AAGGGTTG-ACC--CATCAGCGCTGAGGAGGGGAGACGGTGATCCTGAGGTAA-TA--GGG--CCAT-AGACT-TCCTTCAAGNCGTCCGTAAGGATTNNCTTCGAGCTTCGTGTGCGT-CGNNCTGTC-TT-------GC-AAGCCCTGAATCTCNTCNGCTTNGNCGCTCGACCAGG-AATCCTGCATCT-GCGCGA-TTC-GCTGGA-TAG---T-----GCTGCGTACGTTCCTCAG-TG------GTTTTTC-TTGGGTGCT---GACTTNAG-G---TCG-TCGAGGTG-AGNCTCGTAGC-GC-C--GACG-----TTTTT--CCGCCAG-AGNTGCTGGATCTTCGCGCAGTTCTC-GTCAAACCAG-TCCTTGTG----CTTCCT-TG--TAGCTGNC--CCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGCGCCACGCTGTCCTCAACATCCTGGCCTTCTCAGCACAAAGGAGTCTAGGCGTTGCTCCCAAAGATGTCGGCAAAAAGACTGCTTGATGTTGCTGACCTTCA-GCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTNATT-CCCTGC----GGCC-GTCTTTTGGGCT---------------------GGAC---GCGAATATTGAG-TTTGGAGACGA-CGAGGCGGTGGTCCGTCCAGCACT-CTGCAC-CGCACATGGTC-TTCGTGA----CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CGA----------TGCTTTGANCGGGGGTGCNTTCCATGGANGNCCTGTTNCGAGTNGGNAGNCGGAANACGGTGGTTGGTGAGATCGNNAGGTCGTGCTCT-GCGC-AAGTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGAAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTCGCCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAG-GGTGATGACA-----GTGTTTAGNCTCCCCGTAAGANCTGTCTTTAGTTTCCT---CT-GG-----TTGGTCATGGTG-GNGGCA-TT-GGCACTGA-CAANGGTGACATTTGT-CTTGCTGTCCA-CGGGAAAG---GGGAGCTTCATCTTCATAA-ACCC-G-TCGTTAAGACTC-TT-AGGAA--C-CTTGCAAG-CTT-CCGGNCATGTGT-CGTCTTGACTGCGAAGCCA-ACT-CCTGAC-TCGCGTCGCTCTTCG--GCCCGC-GTCC--ACTCCAAAA-AAGGTGTAACC-GC-ACCNCCTTCTCAATTAATTGGCC-TTTT-TCTGCAAGC-C-G-GTTTCG-CTAAGAGCCGCGA--TATCGATCTTGTATCTG--GCCAGTTCCTTTGCNACTAGCGC-GTTCGTCTCTCTGG--TCTCT-CTG-CTCGGCGTTGTCAAGAAGCG-TTCTAACGTTCC---CGGCGATGCTAAGTGGCGCAA-CCTTGTC-TCC-TTT---ATTCTTTCT---AGTATTTCGAGACCGCCAAAGGGGTAAAAGGGGATCCCCGCCAGCTGCGGTATGCTNACCAGGGTGGGTTAGTAGGCAGGCTATTTNTAGTGGCAACCTTTCCTAGCCCNNTCCTCANGCTNTGGAGGCGAGCAGAGTCGATCCNAAAGAGGACTGCTCNGTTCACTCACGGAGGCTGCCGGGCTCCACCGTTGCCTTGGTCCAATGAAGGACGACCACTCNAGCTTGTCCTGAGCCGCCCGTGGCGCAGGNTCGCGNCTACCGCTCCCAGTGTATCCTCACCTA-TCGCTTCGCCGCT-CGCCCGTCGCNACAGGGCT-TTGAATAGGATGGNNGGATGACTTGAATTATGATGTCACGACTTGCGCG-TGACTTGGATTATAGTGAG-G-AGAN--TTGCGC---A-C--GAATCGACCTCACTCTCTCGTCCTGGA--ACCGCCTGGGTCCAGTGGCAGGACANAGTCGA-GACGGCTGGAGACGGAGTCGGA-TGCGGTGGATGACCNNGGNTATTCCTAACGTGCTCTCGANACCTGCTCTCTGCCGNCCCGCCTCGNCGCGATTGCTGGNAACCGCCTTTNTCGCCCGCTGAACNAGGTGGTTTCCTCCGTGCAGTCCGCCGAATCCCAGTCTTCACATGNCAGGGAGACAAAACCAACTAAAAGCTGAGGATCGAGGGTCCAGCAGGCATACCAGCTGTTC
Reference ( gi|1 )            :                                                                                                                                                                                                                   ATAGGCGGAGTAGAGGT--CGGCGTGCTGGTCC-TGACACTT--TTCCTGCC-CCTGTCTACCAACAAATACCATGTCGATAGTCCCGCG-TTCTTT-CCAGAAACCACACTGGCTCTCAGGTAGGAGGCCTT-GCTCGAGGTGCGCGATAAGGCGG-TTGAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGAT---TCTGCGATGATTGT--CGCAGACTTGGCTGTTTCCTTTGCGCTTGTAGAGGTGGATGATGGT-GGCGTCCTTGAAGTCCTGTGGG--ACT-G-T---CTCGTGCTGCTAGATGAGCTGA-AACAGCTGGTGAAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCCTTGAAGATTTCAGCTGGGATGGAATCCGAACCAGGTG-A--TTTGC-C-ACTTGAAAGTAGTC-G---GGCTGCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGAGCGTCCATGGTC-TCTTCGAATAAGGTTCACAT-TGGGAGAAAGCCTGTCGATAGCTCATTAAT-ATCG-TGATGCGTGTAAAGTCCTGTTCAGGAACCGC--AGCCGAAATCTTCTCGCCAATCTCTTCCAAACCTTTCC---TTGTCGATGATAAAGGGTTGTACC--CATCAGCACTGAGGAGTGGAGA-GGTGATCCT-AGGTAA-TATTAGG--CCAT-AGAC--TCCTTCAAGCTGT-CGTAAGAA--AGCAGAGAGC--CATGTGCGTATACACTGTC-TTCC-----GCAAAGCCTTGAATCTCGTCCGGTTTGCTACTCAACCAGG-AATCCTGCATCTGGCGCAACTTC-ACTTGA-TGG---T-----GCTACGTACGTTCCTCAG-TG-----TGTTTTTC-TTAGATGCT---GACTTTGG-G---TCG-TCGAGATG-AGCTTTGTAG--GCAC--GACG-----CTTTT--CCACTAGCAGCTGCTGGATCTCTGTACAGTTCTC-ATCAAACTAG-TCCTTGTG----CTTCCT-TG--TAGCTGGC--CCGAGACACTTCATGGCTCTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACACCCTGGCCTTC-CACCACAGTGGAGTCTAAGCGTTGCTCC--AAGATGTTGGC-AAAAGACTGCTTGATGTCGCTGACCTTTA-GCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCACT-CCCTGC----GGCC-GTCTCTTGGGCT---------------------GGAT---GCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACT-CTGCAC-CACACATGGTC-TTCGTGA----CTGGTACATCTTGCCTGTTACTCCTCC-TTA-CGATGACGAAGT-------------CAA----------TGCTTTGAGCGGAGATGCA-TCCAT-GACGTCCTGATTCGAGTAGGGAGGTTGAAGACAGT-GTTGGT--GATCAGAAGGTCATGCTCT-GCGC-ATGTTTGGAGTAGTAGTAG-ACCGTTTCTGTTGCAGTTGCCGACTCCATGCTTCCCGATCA-CTCCTTC-CCAGGTGACGTCGT-CACGACCAACTC-TCGCATTAAAATCACAAAGAATAATGAGTTTGTCTGCGTTGGGAACAACGGTGATGACA-----GTGTTCAGG-TCTTTATAAAACTTGTACTTGGTCTCAT---CTGGG-----TTGGTCATGGTG-AGGGCA-AT-GGCATTGA-CAATGGCGA----TGTACTT-CTGTCCA-TGAGAAAGA--GGGAGTCTCATCGTCAT---TC---G-TCATTCACACCCCTTGGGGGA--C-CGTCCAA--CTTGCCAATCA-ATGT-CGTCTTGACTGCAAAGTCA-ACT-CCTGCC-TCTCTTCTCTCTTTGG-GTCCGC-GTCC--AATCCATAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCC-CTCT-CCTGCCAGC-CTG-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATACCTG--GCGAGTTCACTTGCAATGATTGCTGTGCGTCTCTAAGG--TATCT-CTGACTCGTCCCTGTCAAGAAGCG-TGCGAACGTT-----CAGCAAGGGTCAGTGGTGTAATCCTTGTTTTCCTTTTTGAATTTTTTCTTTCATTGTTTCGA--CCGC---ATGTGTA-----GGCCCCCCTCCAGTCGCGGTAAACTGGCTAGAGTAGGT-AG--GGCAGGCAATGTTTGG-GACA-CCTTTTCTAGTCCGCTCTTCATGCCATGGAGGTGAGCAGGG-CGTTCCTAAAGAGGGCTGCTCAGT-CGCCTA-GACGGCTGCCGAAATCTACTGCTGCTCCGGTTCAGTGAATAGCGACCA--TA----TGGCCTGAGCCGCCCGTG-TGCAGGTTTGCGGCTACGACTACCAGTGTACTCACACCTG-TCGCTTCGTCGCT-CGCCTGTCGCCACAGGACTATTG---GGGATGAAGGGATGGTTTGAAGGATGATAAGATGACTTGCGCGATGACTTTGTTTAAAGTGAA-A-AGAG--TTGCGC---ATCTCG--TTGACTTCACTCTCTCGCCCAAAA--ACCATCTGGGTCCAGCAGCAGGACATGGTCGA-GACGGCTGGAGACGGAGGTGGA-TGCAGTGGATGACCGTGGCT-T-CCTA-CGTGT-ATCGAAAC--GCTCTCTGT-GCTTCAC---GACGCG-TTGCTGGGAATCGCTTTTCT-GCCCGTTGAACCAGGTGCTTTCCTCCGCGCAGTCCACCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAAGATCCAGCA-GCATGCCAGCTGATC
gi|7                          :                                                                                                                                                                                                                   ATAGGTGGAGTAGAGGT--AGGCGTTCTGCTCC-TGACACTT-----CTGTA-GCTGTCTAGCAGCAAATACCATGTCGATAGTCCCGCG-TTTTTTTCCGGAAACCACACTGGCTCTCAGGTAAGAGGTCTT-GCTCGAGGTGCGCGATAAGGCGG-TTGAGCAGAATTCTATTCAA-GATCTTGCTTGCGATGGACAACAGTGAGAT---TCCGCGATGATTGT--TGTAGACTTGGCTGTTTCCTTTGCGCTTGTAGAGGTGGATGATGGA-GGCGTCCTTGAAGTCCTGTGGC--ACT-G-T---CTCGTGTTGCCAGATGGGCTGA-AACACCTCGTGAACTTT-CT-C-GATCAGGG-CCACATCTCCCTCCTTGTAGATTTAAACTGGAATGGAATCCGAACCA-----------------CTGGAAAGTAGTC-G---GACTGCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGGGCGTCTATGGTC-TCTTCT-ACAGGG---AC-T-TGGGGT--AGCCTGTCGATGG--CAT---C-ATCGTTGATG-GTG-GAAGTTCTGTTCAGGA--TGC--TTTTAAAATGTTC-CGCCCATCTCTGCAAAACTGTT-----TTGTCGGTGAT-AAGAGTTG-ACC--CATCAGCACTGAGGAGGGGAGACAGTAATCCTGAGGTAG-TA--GGA--CCAA-AGACT-TCCTTCAA
gi|11                         :                                                                                                                                                                                                                  gacAGGTTGTGTAGAGATATCGATGT--TGTTCTATG-CACTT--TTCCTGTA-GCTAGCTGGCGGTGAATATCAGGTCCGTTGTTCCTCG-GCTTGT-GCGGAAGCCATATTGAC
gi|2                          : catgctgaagaattttggggctaggacacatccctgtttgaccctgtttgccactgaaaggttttggaaggctctccatcaacaaagactcggaccattatgtcatcatggaactggcggactatagtaatggacctacttggggagtcatacctttccgtcattttccagagtccatcacgactgactgtatcaaatgccttagtcaggtctacaaGAGTAGAGGT--CGGCGTTCTGCTCC-TGACACTT--T-CCTGTAGCCTGTCTAGCAGCAAATACCATGTCGAATGTCCCGCG-TTCT---CCGGAAACCACCATTGCTCTCAGGTAGGAGGCCTTGGTTCGAGGTGT-TTATAAGGCGG-TTGAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGAT---TCCGCGATGATTGTCCCGCAAACTTGGCGGTTTCCTTTGCG--TGTAGAGGTGGATGATGGTAAGCGTCCTTGAAGTCCTGTGGC--ACTAG-T---CTCGTGCTGC-AGATGAGCTGA-AATAGCT-GTGAAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCTTAGA--ATTTCAG--GGGATGGAATCCGAACCAGGTG-AATTTTGC-CTACGTGAAAGTAGTC-G---GACTGCTTT-CTGAGATCTCATCC---AAGGTGGGTGGGGCGTCCATGGTCTTCTTCG-ACAGGGT--AC-T-TGGGGTAA--CCTGTCGATAG--CAT---C-ATCGTTGATG-GTG-GAAGTCCTGTTCAGGA--CGC--TGTCGAAATGTTCCCGGCCATCTCCTCAAAACCTTCCC---TTGTCGGTGAT-AAGGGTTGACCC--CATCAGCACTGAGGAGGGGAGACAGTGATCCTGAGGTAAGTA--GGG--CCAT-AGACTTTCCTTCAAACTGT-CGTA--GA--AGC-----GCTTCATGT-CGT---TCCTGTC-T--------GC-AAGCCCTGAATCTCGTCCGCTTTGC-ACTCAACCAGG-AATCCTGCATCTGGCGCAA-TTC-ACTT-A-TAG---TTGTGAGCT-CGTAC-TTCCTCA--TG-----TGTCTTTCTTTAGATGCT---GATCTTAGTG---TCG-TCGAGATGTAGCTTTGTAGC-GCACGAGACG-----CTTTTTCTCACTAGCAGCTGCTGGATCTCTGTGCAGTTCTC-GTCAAACCAG-CCCTTGTG----CTTCCT-TG--TAGCTGTC--CCGAGGCACTCCATGGCTGTGTTGTACAACCGTGTCACGGAGCGCAACGCCACGCTGTCCTCAACATCCTGGCCTTCTCAGCACAAAGGAGTC-AGGCGTTGCTCTCAAAGATGTCGGCAAAAAGACTGCTTGATGTTGCTGACCTTCA-GCTTG-CTGATG-TCAGACGTTTT--------TTTTAAATTCATT-CCCTGCTGTTGGCCAGCGTTTTGGGCTTTTAATCCTGTGGCTCTTTTGGGATGACGCGAATATTGAGTTTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACT-CTGCAC-CGCACATGGTCTTTCGTGA----CTCGTATGTCTTGCCTGT---CCCTCC-TTAGCGATGACGTAGTCAATGAAGAGATCCAA----------TGCTTTGAGCGGGGATGCATTCCATGGACGTCCTGTTACGAGTAGGGAGGTTGAAGACGGTGGTTGGTGAGATCAGAAGGTTGTGCTCTGGCGC-AAGTCTGGAGTAGTAGTAGAACTGTTGCTGTTGAAGTTGCCGACTCCATGCTT-CCGATCACCTCCTTCGCCAGG-AACGCTGCACACGACCAACTC-TCGCGTT-AAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAG-GGTGATGACA-----GTGTTTAGA-TCTC--TAAAACTTGTCCTT-GTCTCAG---CT-GG-----TTGGTCATGGTG-GGGGCA-TTAGGCACTGA-CAATGGAGA----TGTAATT-CTGCCCATTGAGAAAGGGTGGGAGTCTCATCGTCATAAGAC---GATCGTTCACACTCTTT--GGGA--C-CGGCCAA--CTTGTCGACCA-ATGTCCGTCTTGACTGC-AAGCCA-ACTCCCTGCCTTCTCTCCTCTCTTCGG-GTCCGC-GT-C--AATCCAAAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCTCTCT--CTGCCAGCTCTG-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATATCTG--GCGAGTTCTTTTGCAATGAGCGCTGTGCGTCTC-GGGG--TCTCTCCTGACTCGTCCCTGTCAAGAAGCGTTGCGAACGTTCCAAGCGGCAAGGGTCAGTGGTGTAATCC-TGTTTTCC-TTTTGAAGTTTTTCTTTCGT
gi|6                          :                                                                                                                                                                                                                     tagtgttGTAGAGAT--CGCAGTGCTGCTCT-TGGTATTT--CTCCTGGA-GTTGGCGCGCAGCAAATATCATGTCCGCTGTCCCACG-TTCGGC-GCGGAAGTCGCACTGGCTTTCTGGGAGGAGTCTTT-TTTCAAGGTGTTGGATTAGACGG-TTTAGCAGTACACGAGTCAG-TATCTTCCCAGCTATGGACTGGAGGGAGATGCCTCTGCGATTATTG---CA-AGACT-GACGGTTTCCTTTCCTCTTGTAGATGTCGACAACGCT-GGCATCCTTGAACTGTTGTGGG--ACT-T-TTTCCTCGTGCCACT
gi|3                          :               gctgaagagggtcggagccagcatgcagcactgttttacaccgtttgtcactgtgaaggcatctgactcgtctccatcatctagtaccttcaccatcatgccattgtggaaatgtcgaacaaacgtggtaaacttgctggggcagccgaatttttctatgatcttccataagccctccctgctgaccgtgtcaaaggcctttcagatcgacaaatgtcatTGTTGTTCA-TGGCACTTTTTTTCTGCA-GCT---TGGCGGC-GATATCAGGTCCGTAGTTCCTCGACGCTGC-GCGGAAGCCACATTGACTTTCAGGGAGGAAACCCT-GCTCAAGATGCTCAGCAA-GCGATTTAAGCAG-ACACGGGCAAT-GATTTTG-TTGCTATTGACAG-GGAGATAT---TCTCTCGTGATTGT--CACAGGACTGGCGATTCCCTTTGCGCTTGTAAATGTGAACAATCGT-GGTATTC-TGAACTCTTGCGGGTAGTT-GCT---CTCG-ATTCCC--ATGACCTCATAAAAACTTGT-CAGTTGACTGCAGAT--GGGTTCGCACCT--GTCTTTGTAG-TCTCAGCAGGGATGGCGTCGGGGCCGGGAGCA--TTTTCAC-ACT---GCGTCATCTGCTTGGTGGCTTTGCTGA-CTTTCTTCTTTAGGGGAGGGT----TGTCAA--GT--TCTT-GATTAACG-CCACCTGTGGTAG---GC--GGCAATTGTTCATCATTGATCG-TAGT-----TAGGG--CGATTT--GATACGCTAAATCGAAGT---TTCGCCCATCTCT--CAAGGATTTCCTTTTTGTC--TGTTGCAGGGTTTTACCAAAATC-GCGCTGAGTAAAGG-GA-G--GGTCCT--GTTGA-CTGTGGGTTCCATCAGAC--TGTTTCAGGGCATCCGT-AGAATTTCCTTCGAGT--CGTGTGCGT-CGGGC-GTA-TT-------------CCTTGGATTTCTTCAGCTTAGGCACT-GAGCAGGCAATCCTGCAT---GAGCGAGTTC--CTGGACTGGACTT-----GCTGCGTTTG-----CAGATGAAAGCAGCTTTTC-TT---TACT---GGCTTGAG-GGATTCGTTTTTGGTG-AGGCTCGGAGCAGC-C--GATG-----TTTCT--CCCTCAG-AAATG-TGGATCTTCATGTCGTTCTCAATCAAACAAGCTCCTGGTGGTGTCTCACTCTGTTTAG--GGCGACCGAGG-ATCTCACGGCtgggttagatttctgtattatgacgtgcctcctgccttgtacacttctgcagtgatagctttgccacaggagagttgctttacagtctttttgactgcttcttcagtgaggaggttgtccagtttttgct
gi|20                         :                                                                                                                                                                                                                                                                             atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaaggttgtgtagcagatcacgatgtTAAGGCGG-TTGAGCAGAACTCTAGCCAAAGATCTTGCTTGCGATGGACAGCAATGAGAT---TCCGCGATGATTGT--CGCAAACTTGGCGGTTTCCTTTGCGTTTGTagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtttaagtttggctatgttgagcttagcgacagctttttgccctgtggtttccgctgggctggataaagaggttcattttggagacgatcaagacgatgatccgtccagcagtcctgcacacaacatggcctttgtcagtctctgcgtcctgcctgtccttggtccagtaatgacgtagtcaataggtgccagtgctttgattgagggtgcctccatgaaggtttgtttcgagttggcagccggaacatggtgttggtgatggtcaggtcatgtttgcgcaacatctgaggaggagtccgtgctattacatttgcctactatatgtttttttccc
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                            TCTAGCCAA-GATCTTGCTTGCGATGGATAGCAGTGAGAT---TCCGCGATGATTGT--CGCAGACTTGGCGGTTTTCTTTGCACTTGTAGAGGTGGATGATGGA-GGTGTCCTTGAAGTCCTGTGGC--ACT-G-T---CTCGTGCTGCCAGATGAGCTGA-AACAGCTGGTGAAGTTT-CT-C-AATCAGTG-CCACACCTCCCTCCTTGTAGATTTCAGC
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTCATTCCTGTTTGCAAAGCCCTGAACCT-ACTTAGCTGATTGCTCAGCCAGG-AGCTCTGCATCTCACGCAGTTTTTGCTGGA-TAA---T-----ATAACGCATGTTCCTCAA-TA------GTTTTTG-G-GGGTGCTATTGACTTCGG-T---TCG-TCAATGTG-TGTCTTGTAG--ACCT--GATGGGGTTTTTTT--CCG--AAAAGTTGCTGCATTTTCCCGCAGTTTTC-GTCAAACCTG-TCCTTATG----CTTCAT-GG--TAGCAGGT--CCTTAGCACTGCTTGGCTGTGTTGTAT-GCCGTTTC
gi|10                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     caCCAG-TCCGTGTG----CTTCCT-TG--TAGCTGTC--CCTAGGCACTCCATGGCTGTGTTGTAC-ACAGTGTCACGGAGCGCAGC-CCACGTTGT-CTCAACATCCTGGCCTTC-CAGCATAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTTGCTGACCTTCA-GCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTAATT-CCCTGT----GGCC-GTCTTTTGGGCT---------------------GGAC---GCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACT-CTGCAC-CGCACATGGTC-TTCGTGA----CTCGTATGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CGA----------T
gi|3                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTAAGTTTGGCT-ATGTTGAG----CTTAGCGACAGCT-----TTT--TGCCCTGT----GGTT--TCCGCTGGGCT---------------------GGAT---AAAGAGGTTCAT-TTTGGAGACGATCAAGACGATGATCCGTCCAGCAGTCCTGCACACA-ACATGGCC-TTTGTCAGTCTCTG---CGTCCTGCCTGTCCTTGGTCCAGTA---ATGACGTAGT-------------CAATAGGTGCCAGTGCTTTGATTGAGGGTGCC-TCCAT-GAAGGTTTGTTTCGAGTTGGCAGCCGGAACATGGT-GTTGGT--GATGGTCAGGTCATG-TTT-GCGCAACATCT-GAGGAGGAGT----CCG-TGCTATTACATTTGCCTACTATATGTTT
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaaggttgtgtagcagatcacgatgttgttgttcatggcactttttttctgcagcttggcggcgatatcaggtccgtagttcctcgacgctgcgcggaagccacattgactttcagggaggaaaccctgctcaagatgctcagcaagcgatttaagcagacacgggcaatgattttgttgctattgacagggagatattctctcgtgattgtcacaggactggcgattccctttgcgcttgtaaatgtgaacaatcgtggtattctgaactcttgcgggtagttgctctcgattcccatgacctcataaaaacttgtcagttgactgcagatgggttcgcacctgtctttgtagtctcagcagggatggcgtcggggccgggagcattttcacactgcgtcatctgcttggtggctttgctgactttcttctttaggggagggttgtcaagttcttgattaacgccacctgtggtaggcggcaattgttcatcattgatcgtagttagggcgatttgatacgctaaatcgaagtttcgcccatctctcaaggatttcctttttgtctgttgcagggttttaccaaaatcgcgctgagtaaagggagggtcctgttgactgtgggttccatcagactgtttcagggcatccgtagaatttccttcgagtcgtgtgcgtcgggcgtattccttggatttcttcagcttaggcactgagcaggcaatcctgcatgagcgagttcctggactggacttgctgcgtttgcagatgaaagcagcttttctttactggcttgagggattcgtttttggtgaggctcggagcagccgatgtttctccctcagaaatgtggatcttcatgtcgttctcaatcaaacaagctcctggtggtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagGCTCT-GCGC-AAGTCTGGAGTAGTAGTAG-ACTGTTGCTGTTGAAGTTGCCGACTCCATGCTTCCCGATCA-CTCCTTC-CCAGGAGACGCTGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAttttccc
gi|4                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTCGG-CAC----AACGCGTGGCATTAAAATCACCACGAA--AT-AGTTTATCAGACTTGGGAATA--GATGA--ACAAGGGAGTG---AGCCTCCTCGTAAGAACTGTCTTTAGTTTCCTTTCCTCGGAGGTTTTGTTCATGTTGGAAGGCA-TA-GACCTGGATCAGAGGTGACATTTGT-CTTACGGTCCA-CAGGA-------GGAGCTGCATCTTCAT---ACCCTA-TCATTAAGACTC----AGGAATGC-TTTGCAAGCTTTTCTGGACATGTGT-TGTTTTGA-TGCGAAACCC-ACT-CCTGAC-TCGCGTCGCTCTTCGCTGCTTGC-GCCC--ACTCCAAAG-AAGGTGTAACC-GC-TTCCCCATCTCAGTTAATTGGCC-TTTTGTCTGCAAGC---GAGTTTCAACTAAGAGTCGCAAATCATCGATCTTGTATTTTTTGCCAGTTCCTTTGCTACTAGTGC-GTTCGTCTCTCTGGCCTATCT-TT---TTGGTGTTGTCAGTAA-CG-TTCTGACGTTTC---CA-TGATGCTAGGTGA-GCAAACCTT----TGCTTTT---ATTCTTTCT--AAGTATTTCGAGACCGCCAAAGGGGT-------GATCTCCGCCAGCTGCG-TATGCTTAC-AGGGT-GGT-AGTAGGCAGGCTATTTATAGTGGCAACCTTTCTTAGCCCGTTCCTCAAGCTGTGGAGGCGAGCAGAGTCGATCCAAAAGAGGACTGCTCCGTTCACTCACGA-GGCTGCCGGGCTCCATCG-TGCCTTGGTTCAATGAAGGACGACCA--CT----TGTCCTGAGCCGCT-GTGGTGCAGGTTCGCGTCTACCGCTCCCAGTGTATCCTCAGCTACTTTCTTCGCCGCT-T-CCCATCGCCACAGGAC--TTGAATAGGATGACTGGATG---TGATGTAT-------CGACTT--GCGGTGACTTGGATTATAGTGAG-G-GGAGACTTGCGC---A----GAATCGGCCTCACTCTCTCGTCT--GA--ATCG-CCGGGTCCAGTGGCAAGACAGAGTC-C-GACGG-TGGAGA--GAATCAGA-TGCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgaccaatgtcgtcttgactgcaaagccaactcc
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cattccagacatggtaTGTCTTCAGTTTCCT---CAAGG-----TTCGTCCTTGTT-GTAGCATAT-A-CACTGA-TCAGGGTGACATTTGT-CTTGCT-TCCA------AAG---GGGAGCTTTATCTTCATAA-TCCT-A-TCACTAAGACC--TTCAGGAA--TGCTTGTAAG-CTT-CTGGACATGTGT-TGTTTCGA-TGGAGAAACACAAT-CCTGAC-TCGTGTCGCTCTTCG----CTGCTGTTCTCACTCCAAAAGAACATGTAACC-GCTACCA--TTCTCAATTAATTGGCC-TTTG-TCTGCAAAG-CGA-GTTTCA-CTAAGAGCTGCAA--TATTAATCTTGTATCTG--GCCAGTTCCCTTGCCACTACTTCAGTTCATCTCTCTGG--CCTTT-CTGCTTTGGTGTTATCAAGTAACA-TTCTAACGTT-----CCATGATGCTAAGGTGCGCAA-CTTTGTCGTC---------TTCTTTCT---AGTATTTCGA--CTGC--------TAAAAGGGGATCCCCGCCAGCTGCAGTATGCTAACCAGGGTGGATTAA--AACAGGCTAT-TTTAG-GGCA-CCTTTTCTAACCCCGTCCTCATGCTCTGGAGGCGAATAGAG-CGATCCTAAAGAGGACTGTTCGGT-CACTCA-GGAGGCTGCCGGG---CACCATTGTCTTGGTCCAATAAAGGACGATCACTTAAGCTTGTCCTAAACCGCCCATG-CGTAGGGTCGCAACTACAACTCCCAGTGTATCCTAACCCA-CTGCTTTGCCGCTTCAAC-ATCGCGACAGGGCT-----------TAGAAGGATGACT-GAATGGTGATGTCATGACCTGCGCG-TGACTTGGATTATAGTGAGTG-AAAC--TTGCGC---A----GAATCGACATCACTCTCTCGTCCTGAATTGCC----GGATCCAGT-----GACA------A-GACAGCTGGAGACGcagc
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gcCGACCA-ATGT-CGTCTTGACTGCAAAGCCA-ACT-CCatcaaagatgcag
gi|21                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gctctgcgcaagtctggagtagtagtagactgttgctgttgaagttgccgactccatgcttcccgatcactccttcccaggagacgctgccacgaccaactctcgcgttaaaatcaccaagaatgatgagtttgtcagcgttgggaacagcggtgatgacagtgtttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntCAGTTTACCCACACCTG-TCGCTTCGTCGCT-CGCCTG
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAATTATGATGTCATGGCTTGTGTG-TCATTTGGATTATAGTGAG-GGAGAC--TTGCCCGGAATC-------AATCCCACTCTCTCGTCCTGAA---TCGTC-GGGTCCAGTGGCAGGACAGAGTCGA-GACTGTTGGGGACGAACCAGGA-TGCAG
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     acTTAAAGTGAAGA-AGAG--TTGCAC---AGC--G--TCGATTTCACTCTCTCGTCCGAGG----CACCT------AGTAGCAGGAC-TA-TC----ATGATTTGCGATGG-GACGGT-TACGGTGGATG-CCTAGAATAT-TCTA-CGTGC-CTC--AACCTGCTCT-TATCACTCCAT---AGTGAG-TTGCT-GTAACTGCCTTTATCGCCCG-TGAACg
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gacatgcgttgggaccA--ACCACCTGG-TCCAGC-GCAGGACATGGTCGAAGCCGGC-GGA-ACGGAGTTGGGGTGCAGTGGATGACCGTGGCT-TTCCTAACGTGTTCTCGACAC--GCTCTCTGC-GGCTCGCCTCGCCGCAATTGCTGGGAATCGCCTTTCT-GCCCGTTGAACGAGGTGGTTTTCTCCGTGCAG-CCGCCGAATCCCAGTCTTCA-ATGCTAGG--GAC--AACCAACTAAAAGCTGAGGATCG-AGGTCCAGCAGGCATACCAGCTG
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGCTGGACCAGGTGGTT-CCTCCGTGCAGTCCGCCGAAT-CCAGTCTTCACATGGCA-GGAAACAAAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTCtt
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|8 ): CTACGAAGGCTGTGTAGATATCACGATGCAGTTCCATACAGTTTGCCTGTAGCTGACAGGCGGAAAATATCATGTCCCTTGTTCCTCAACCTGCGCCGAAGCCATATTGGCTTCCATCGAGGAGACCCTGCTCAAGATACTTCAGCAAGCGATTAAGTAGAACACGGGCAAGGATTTTGTCTGCTATTGGTAGGAGGGATATCTCTCGGTGATTTCACAGGACTAGCTTTTTGCGTTTGTGAGTGTGGTTAATCTGAACTCTCGAGGTAGTTGCTCTTGATTCCACATGACCTCATAAAGACTGCAGACGGGTTTTCAGCAGGGATGGCGTCAGGGCCGGGAGTTTCCCCATTGATCATCTGGTTTCTTCTTCAGAGGGAGGGTTTTCGAGTTCTTAGTTTAATGTCGCTTACGAAAGGCCTGTGGTTGCTTCATCATTAATCGCTGCAGGATGATTGAGTACGTTATCGAAGTGTT
Unaligned ( gi|13 ): GCTGTACTGCTCTCAGCCTTTGGGAGGATCTGACTCGTTTTCATCAAGACCCCCAGTAACCCCCCCCCATTCCACCACTGCATGCCATTGGGGTAACTGGGCTATGCCAGAGCAAGACAAAACTTGCTGATGCAACCAAATCTTCCTTAACCAAAAATCCGCCGAACTTCTAGCCAAGTGACGGCCAATACTTTTCCAATGGTTCACTTGTTGACCTCGGTCCGAAGGCCTTTGCCACAAATCGACAAAGGTCATAAGTAGCAGGTCACAGTG
Unaligned ( gi|17 ): CTACGAAGGTTGTGTAAGATCACGATGTTGTTCCATGCACTTTTCCTGTAAGCTGGCGGGGCGGCAAATACATGTCCGTAGTTTCTCCCTGCGCGGAAGCCACATTGAACTTTCAGGGAGGAGACCCTGCTCAAGATGCCTCAGCAAGCGAATTAAGCAG






Alignments
lowQualScore                  :                                                                                                                                                                                                                                                   1111  1111                                                                                                                                                                                                                                                                                                                           1                                                     2                     5555555555555       1            11  22222                   111       1111      22222                   555555555555555555555555            111   111        111   111                11    111          1           222            111             1      111  11             1        111              11  22   11    1    111            11  666666666666666666          3333333333333333333                      1            1            222     2   222     1   333333333   1             111  333333        1111    111        22222   1        1          33333333333333333      1 111  2                          1                                                              1                    2          2                 2                            33               2                              1                      33333333333            2222    11         777777777777777777777777777               1           1                         1                1       11                           1   11           777777777777777777777777777                 111                                        2      33                   1      1                 1                                         11      2              1            1                                                2          22222        22  1111                        5555555    11           11     11        11         2222   1   1       444444444444                 33333333            22222    222222         33        1                                  1              333333    1    11         1           2  1             11           11        2222222      1             11                 11                       3                   1   2   1                   1        33333333             1    2     2       44444         22222       111     888888888888888                            1       333333             1   2   11                                         2                       11      33                    1                          666666                   111                                       1                               44444444444444444     2222222222                   1                  2222             4444444                    33        1                       111                                         222    22     11        33        6666666666666       22                    2     1                                    2                        2     33333               1         2               
lowQualScore                  :                                                                                                                                                                                                                                 5  1 5    5    66 0000  1111   1   0        3 66    5   5  2 55      2    2         4     4  77   999 5           1  5         1     0     5         5   5        5   5         0        5                     2  0       5    0        66  5    0    2            0        5     0       6                    77 6  777           1 2       2 6  1 1  3    1    6  777   1    77                    5       2  6     0         1  9999999999999 8   8 6 777  0   5 11  00000     8    88    1  000   0   7777 1    00000   1 6     8   8   444444444444444444444444         1  777   444    0   111   444   88   8       11    222     3    5           111     33   2 777             0      111  33    3  2     0        666        2   3 00  33   33    0    666        11  33  444444444444444444  0   6   4444444444444444444            1  1   44 0 2  44      0         3  444   2 0   444  8  0   333333333   0     55      444  888888      0 4444    777     1  33333   0  0     0  1  2    66666666666666666      0 555  0  1  2         22         0          8                      1   1       0                0                    3          3                 3               7 0          00               3                       0      0  2   3    6      6   11111111111  44        1111    22   0     333333333333333333333333333               0         2 0             2           0      0         0       33   2               99      0   22           222222222222222222222222222       1     0   555    6  1 1 6    1     1  1  888   1     3      00    222     0  2   0      0    2          3 0    3        3                   6       33      3      6    0  3            0       3             33  2                      0 2   3    55555   3 0  44  7777   0 1        7     2   2222222    33           11     44   3    33   1  1  4444   0   2  2    222222222222            3    44444444  2  3 2    22222    111111     6   33    1 8 0            3   6    8     8    3 0  2 2  2      000000    0  6 33 2       0        4  0  0   777   4   88    2      00     3  4444444      0     3  6    33       2         33  2     0     1  3 44  0  3      999     0 0   0   0 333          6    0 3      33333333   3 2 3     0    0     0   6   22222 3       11111       222     777777777777777                  6      1  2       111111             4   3   44     0       22      1   1               3      1              1 44      00             999    2         0                222222              6    444     1     1    77              4      0              8        1     0 00000000000000000     7777777777      2 2        6 0            1     3333  8  1       3333333     1              99   2    5  5       1  1   9999  666     3      1  0 55   8   2       7  22  333    22     99   6 1  00     6  2222222222222  1    00      77  0       1 3     0     1        7           7         3          6   11 6 6    3     55555               2 0       3               
lowQualScore                  :                                                                                                                                                                                                                                 .  . .    .    .. ....  ....   .   .        . ..    .   .  . ..      .    .         .     .  ..   ... .           .  .         .     .     .         .   .        .   .         .        .                     .  .       .    .        ..  .    .    .            .        .     .       .                    .. .  ...           . .       . .  . .  .    .    .  ...   .    ..                    .       .  .     .         .  ............. .   . . ...  .   . ..  .....     .    ..    .  ...   .   .... .    .....   . .     .   .   ........................         .  ...   ...    .   ...   ...   ..   .       ..    ...     .    .           ...     ..   . ...             .      ...  ..    .  .     .        ...        .   . ..  ..   ..    .    ...        ..  ..  ..................  .   .   ...................            .  .   .. . .  ..      .         .  ...   . .   ...  .  .   .........   .     ..      ...  ......      . ....    ...     .  .....   .  .     .  .  .    .................      . ...  .  .  .         ..         .          .                      .   .       .                .                    .          .                 .               . .          ..               .                       .      .  .   .    .      .   ...........  ..        ....    ..   .     ...........................               .         . .             .           .      .         .       ..   .               ..      .   ..           ...........................       .     .   ...    .  . . .    .     .  .  ...   .     .      ..    ...     .  .   .      .    .          . .    .        .                   .       ..      .      .    .  .            .       .             ..  .                      . .   .    .....   . .  ..  ....   . .        .     .   .......    ..           ..     ..   .    ..   .  .  ....   .   .  .    ............            .    ........  .  . .    .....    ......     .   ..    . . .            .   .    .     .    . .  . .  .      ......    .  . .. .       .        .  .  .   ...   .   ..    .      ..     .  .......      .     .  .    ..       .         ..  .     .     .  . ..  .  .      ...     . .   .   . ...          .    . .      ........   . . .     .    .     .   .   ..... .       .....       ...     ...............                  .      .  .       ......             .   .   ..     .       ..      .   .               .      .              . ..      ..             ...    .         .                ......              .    ...     .     .    ..              .      .              .        .     . .................     ..........      . .        . .            .     ....  .  .       .......     .              ..   .    .  .       .  .   ....  ...     .      .  . ..   .   .       .  ..  ...    ..     ..   . .  ..     .  .............  .    ..      ..  .       . .     .     .        .           .         .          .   .. . .    .     .....               . .       .               
lowQualScore                  :                                                                                                                                                                                                                                 7  0 9    0    99 5555  9999   1   8        1 99    0   0  8 22      0    8         0     5  11   444 6           1  0         0     4     7         7   3        0   0         8        0                     5  2       0    9        99  0    9    5            2        7     7       7                    77 7  555           0 5       5 7  0 0  5    7    7  555   0    77                    7       9  7     6         4  8888888888888 0   0 0 000  6   0 88  00000     0    66    0  888   6   0000 4    00000   0 0     0   0   222222222222222222222222         0  000   000    8   000   222   88   0       00    000     8    0           000     55   5 555             0      000  88    2  0     0        222        5   2 88  88   88    0    555        77  33  333333333333333333  7   7   8888888888888888888            0  0   22 8 0  55      0         2  000   0 0   222  8  0   555555555   5     88      000  888888      2 2222    555     0  88888   0  2     0  0  0    88888888888888888      0 000  0  0  5         22         0          0                      0   0       2                0                    3          3                 7               3 7          33               7                       2      0  5   2    5      5   22222222222  22        2222    55   8     555555555555555555555555555               0         0 0             0           0      2         0       88   5               55      0   55           888888888888888888888888888       0     7   777    7  0 0 7    0     0  0  333   0     3      33    777     7  5   0      0    5          2 0    2        0                   7       33      3      7    7  3            0       2             55  5                      0 5   2    00000   2 8  33  0000   7 0        0     5   5555555    88           00     00   2    88   0  2  0000   0   8  5    222222222222            0    55555555  0  0 5    88888    000000     5   88    0 0 6            2   4    0     0    0 0  5 5  5      555555    0  5 88 5       0        0  0  0   888   0   55    5      88     0  2222222      0     0  5    88       5         88  5     2     0  0 55  0  0      222     2 0   0   0 000          5    0 0      55555555   0 5 0     5    0     0   5   00000 0       88888       333     333333333333333                  7      0  0       333333             0   7   77     7       00      0   0               7      0              0 77      00             333    3         7                000000              7    000     0     0    33              0      0              8        0     7 33333333333333333     2222222222      5 0        5 0            4     4444  0  0       2222222     4              00   2    5  2       0  0   0000  555     7      0  8 44   0   0       3  00  777    77     33   7 0  33     7  0000000000000  0    77      77  7       0 3     5     0        3           3         3          7   77 7 7    7     33333               0 7       3               
consensus                     :                                                                                                                                                                                                                             ATAG-GTTGNGTAG-AGAT--C--GGCG-TG-CTGCTCCTGGCACTTTTC--CTGT-AGC-TGNC-TGGCGGCAAATACCATGTCCGTNGTCCCNCG-TCCTG--CGCGGAAGCCACACTG-GCTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGTGG-CA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-GTGAAGTTT-CT-C-GATCAGGGC-CGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATC-CGAGGTGGG----TGGGGC-----GTCCATGGTCT-CTT-CGA-CAGGGT--AC-TTGGGGTA--G-CCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCTC-T-CAAAACCTTTCC---TTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGT-AGAA----C---GAGC-TCGTGTGCGT-CGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAA-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GACTTCGG-G---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGTC-TCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGCAAAA-GACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCATTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNTCTN------GGTT--GGTCATGGTGGG-GGCATN-GGCACTGA--CAANGGCGACATTTGT-CTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-CCC-ATCATTNANACCCTC--GGGGA--C-CTTGCAAGCTTG-CCGANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG--GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTC-GNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTCTCCTTTT-G-ATTCTTTCT---A-GTATTTCGAGACCGC---A-G-GTA-----GGATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGG-TAG-AGGCAGGCTATTT-TAG-GGCAACCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGTTCGCTCA-GGAGGCTGCCGGGCTCCACCGCTGCCTCGGTTCAATGAAGGACGACCA----A-CTTGTCCTGAGCCGCCCGTGGCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGACT-TTGAA-GGGATGA--GGATGGCTTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGAG-G-GA-GACTTGCGCA---CGAATCGACCTCACTCTCTCGTCCT-GAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCT-TTCCT-ACGTGCTCTCGAAAC--GCTCTCTGC-G-CCCGCCT--CGNCGCGA-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
Reference ( family-425 )      :                                                                                                                                                                                                                             ATAG-GTNGAGTAG-AGGT--C--GGCG-TN-CTGCTCCTGGCACTTTTC--CTGT-AGC-TGNC-TGGCGGCGAATATCATGTCCGTTGTCCCGCG-TTCTG--CGCGGAAGCCACACTG-GCTCTCAGGNAGGAGGCCTTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGTGG-CA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCTCGTGAAGTTT-CT-C-GATCAGGGC-CACACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGG--GA---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATC-CGAGGTGGG----TGGGGC-----GTCNATGGTCT-CTT-CGA-CAGGG---AC-TTGGGGT---G-CCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--NTCGAAATGTTCCCGCCCATCTC-T-CAAAACNTTTCC---TTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCGCTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TA--GGG--CCAT-AGAC-TTCCTTCAAGNCGTCCGTAAGGATTNNCTTCGAGCTTCGTGTGCGT-CGNNCTGTCTT--GCAA-GCCCTGAATCTCNTCNGCTTNGNCGCTCGACCAGG-AATCCTGCATCT-G-CGCGA-TTC--GCTGGA-TAG---T-----GCTGCGTACGTTCCTCA-G-TG------GTTTTTCTTGGGTGCT---GACTTNAG-G---TCG-TCGAGGTG-AGNCTCGTAGC-GC-C--GACG-----TTTTTC-CGCCAG-AGNTGCTGGATCTTCGCGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGCGCCACGCTGTCCTCAACATCCTGGCCTTCTCAGCACAAAGGAGTCTAGGCGTTGCTCCCAAAGATGTCGGCAAAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTNATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACGA-CGAGGCGGTGGTCCGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CGAT----------GCTTTGANCGGGGGTGCNTTCCATGGANGNCCTGTTNCGAGTNGGNAGNCGGAANACGGTGGTTGGTGAGATCGNNAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGAAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTCGCCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAG-GGTGATGACA-----GTGTTTAGNCTCCCCGTAAGANCTGTCTTTAGTTTCCTCT-------GGTT--GGTCATGGTGGN-GGCATT-GGCACTGA--CAANGGTGACATTTGT-CTTGCTGTCCA-CGGGAAAG---GGGAGCTTCATCTTCATAAACCC-GTCGTTAAGACTCTT--AGGAA--C-CTTGCAAGCTT--CCGGNC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGAC-TCGCGTCGCTCTTC-G--GCCCGC-GTCC--ACTCCAAAA-AAGGTGTAACC-GC-ACCNCCTTCTCAATTAATTGGCCTTTT-TCTGCAAG--CC-G-GTTTCG-CTAAGAGCCGCGA--TATCGATCTTGTATCTG--GCCAGTTCCTTTGCNACTAGCGC-GTTCGTCTCTCTGGTCTCT-CTG-CTC-GGCGTTGTCAAGAAGCGTT-CTAACGTTCC---CGGCGATGCTAAGTGGCGCAA-CCTTG-TCTCCTTT----ATTCTTTCT---A-GTATTTCGAGACCGCCAAAGGGGTAAAAGGGGATCCCCGCCAGCTGCGGTATGCTNACCAGGGTGGGTTAGTAGGCAGGCTATTTNTAGTGGCAACCTTTCCTAGCCCNNTCCTCANGCTNTGGAGGCGAGCAGAGTCGATCCNAAAGAGGACTGCTCNGTTCACTCACGGAGGCTGCCGGGCTCCACCGTTGCCTTGGTCCAATGAAGGACGACCACTCNAGCTTGTCCTGAGCCGCCCGTGGCGCAGGNTCGCGNCTACCGCTCCCAGTGTATCCTCACCTA-TCGCTTCGCCGCTCGCCCGTCGCNACAGGGCT-TTGAATAGGATGGNNGGATGACTTGAATTATGATGTCACGACTTGCGCG-TGACTTGGATTATAGTGA--G-GA-GANTTGCGCA---CGAATCGACCTCACTCTCTCGTCCTGGAACCGCCTGGGTCCAGTGGCAGGACANAGTCGA-GACGGCTGGAGACGGAGTCGGA-TGCGGTGGATGACCNNGGNTATTCCTAACGTGCTCTCGANACCTGCTCTCTGCCGNCCCGCCT--CGNCGCGA-TTGCTGGNAACCGCCTTTNTCGCCCGCTGAACNAGGTGGTTTCCTCCGTGCAGTCCGCCGAATCCCAGTCTTCACATGNCAGGGAGACAAAACCAACTAAAAGCTGAGGATCGAGGGTCCAGCAGGCATACCAGCTGTTC
gi|1                          :                                                                                                                                                                                                                             ATAG-GCGGAGTAG-AGGT--C--GGCG-TG-CTGGTCCTGACACTTTTC--CTGC-CCC-TGTC-TACCAACAAATACCATGTCGATAGTCCCGCG-TTCTT--TCCAGAAACCACACTG-GCTCTCAGGTAGGAGGCCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-TGCGATGATTGTC--GC-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGTG-GCGTCCTTGAAGTCCTGTGG-GA-CT-G-TCTCGTGCTGCTAGATGAGCTGA-AACAGCTGGTGAAGTTT-CT-C-GATCAGGGC-CACACCTCCCTCCTTGAAGA-TTTCAGCTGG-GATGGAATCCGAACCAGGT-GA---TTTG--C-CAC-TTGAAAGTAGTCGGG-CT-----GCTTT-CTGA-ATCTCATC-CAAGGTGGG----TAGAGC-----GTCCATGGTCT-CTT-CGAATAAGGTTCACATTGGGAGAAAG-CCTGTCGATAGCTCATTAATATCGT-GAT-GCGTGTA-AAGTCCTG-TTCAGGAACCGCA--GCCGAAATCTTCTCGCCAATCTC-TTCCAAACCTTTCC---TTGTCGATGATAAAGGGTTGTA-CC--CATCAGCACTGAG-GAGTGGAGA-GGTGATCCT-AGGTAA-TATTAGG--CCAT-AGAC-T-CCTTCAAGCTGTC-GTAAGAA--AGCAGAGAGC--CATGTGCGTATACACTGTCTTCCGCAAAGCCTTGAATCTCGTCCGGTTTGCTACTCAACCAGG-AATCCTGCATCT-GGCGCAACTTC--ACTTGA-TGG---T-----GCTACGTACGTTCCTCA-G-TGT-----GTTTTTCTTAGATGCT---GACTTTGG-G---TCG-TCGAGATG-AGCTTTGTAG--GCAC--GACG-----CTTTTC-CACTAGCAGCTGCTGGATCTCTGTACAGTTCTC-ATCAAACTAG-TCCTTGTGCTTCCTTGTAGCTGGCCCGAGACACTTCATGGCTCTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGTC-TCAACACCCTGGCCTTC-CACCACAGTGGAGTCTAAGCGTTGCTCC--AAGATGTTGGCAAAA-GACTGCTTGATGTCGCTGACCTTTAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCACTCCCTGC----GGCC-GTCTCTTGGG---------CTG---------------GATGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCACACATGGTC-TTCGTGA--CTGGTACATCTTGCCTGTTACTCCTCC-TTA-CGATGACGAAGT-------------CAAT----------GCTTTGAGCGGAGATGCA-TCCAT-GACGTCCTGATTCGAGTAGGGAGGTTGAAGACAGT-GTTGGT--GATCAGAAGGTCATGCTCT-GCGCAT-GTTTGGAGTAGTAGTAG-ACCGTTTCTGTTGCAGTTGCCGACTCCATGCTTCCCGATCA-CTCCTTC-CCAGGTGACGTCGT-CACGACCAACTC-TCGCATTAAAATCACAAAGAATAATGAGTTTGTCTGCGTTGGGAACAACGGTGATGACA-----GTGTTCAGG-TCTTTATAAAACTTGTACTTGGTCTCATCTG------GGTT--GGTCATGGTGAG-GGCAAT-GGCATTGA--CAATGGCGA----TGTACTT-CTGTCCA-TGAGAAAGA--GGGAGTCTCATCGTCAT----TC-GTCATTCACACCCCTTGGGGGA--C-CGTCCAA-CTTG-CCAATC-A-ATGTCGTCTTGACTGCAAAGT-CAACT-CCTGCC-TCTCTTCTCTCTTTGG--GTCCGC-GTCC--AATCCATAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCCTCT-CCTGCCAG--CCTG-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATACCTG--GCGAGTTCACTTGCAATGATTGCTGTGCGTCTCTAAGGTATCT-CTGACTC-GTCCCTGTCAAGAAGCGTG-CGAACGTT-----CAGCAAGGGTCAGTGGTGTAATCCTTGTTTTCCTTTTTGAATTTTTTCTTTCA-TTGTTTC--GACCGC---ATGTGTA-----GGCCCCCCTCCAGTCGCGGTAAACTGGCTAGAGTAGG-TAG--GGCAGGCAATGTTTGG-GAC-ACCTTTTCTAGTCCGCTCTTCATGCCATGGAGGTGAGCAGGG-CGTTCCTAAAGAGGGCTGCTCAG-TCGCCTA-GACGGCTGCCGAAATCTACTGCTGCTCCGGTTCAGTGAATAGCGACCA---TA---TGGCCTGAGCCGCCCGT-GTGCAGGTTTGCGGCTACGACTACCAGTGTACTCACACCTG-TCGCTTCGTCGCTCGCCTGTCGCCACAGGACTATTG---GGGATGAAGGGATGGTTTGAAGGATGATAAGATGACTTGCGCGATGACTTTGTTTAAAGTGA--A-AA-GAGTTGCGCATCTCG--TTGACTTCACTCTCTCGCCCAAAAACCATCTGGGTCCAGCAGCAGGACATGGTCGA-GACGGCTGGAGACGGAGGTGGA-TGCAGTGGATGACCGTGGC--TTCCT-ACGTG-TATCGAAAC--GCTCTCTG------TGCTTCACGACGCG--TTGCTGGGAATCGCTTTTCT-GCCCGTTGAACCAGGTGCTTTCCTCCGCGCAGTCCACCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAAGATCCAGCA-GCATGCCAGCTGATC
gi|10                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCAG-TCCGTGTGCTTCCTTGTAGCTGTCCCTAGGCACTCCATGGCTGTGTTGTAC-ACAGTGTCACGGAGCGCAGC-CCACGTTGTC-TCAACATCCTGGCCTTC-CAGCATAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGCAAAA-GACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTAATTCCCTGT----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTATGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CGAT----------
gi|11                         :                                                                                                                                                                                                                               AG-GTTGTGTAG-AGATATC--GATG-T---TGTTCTATGCACTTTTC--CTGT-AGC-TAGC-TGGCGGTGAATATCAGGTCCGTTGTTCCTCG-GCTTG--TGCGGAAGCCATATTG-AC
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             catgctgaagaattttggggctaggacacatccctgtttgaccctgtttgccactgaaaggttttggaaggctctccatcaacaaagactcggaccattatgtcatcatggaactggcggactatagtaatggacctacttggggagtcatacctttccgtcattttccagagtccatcacgactgactgtatcaaatgccttagtcaggtctacaaCTGT-TT--GCAAAGCCCTGAACCTACTTAGCT-GATTGCTCAGCCAGG-AGCTCTGCATCTCA-CGCAG-TTTTTGCTGGA-TAA---T-----ATAACGCATGTTCCTCA-A-TA------GTTTTTGG-GGGTGCTATTGACTTCGG-T---TCG-TCAATGTG-TGTCTTGTAGA-CC-T--GATGGGGTTTTTTTC-CGA-AA-AGTTGCTGCATTTTCCCGCAGTTTTC-GTCAAACCTG-TCCTTATGCTTCATGGTAGCAGGTCCTTAGCACTGCTTGGCTGTGTTGTAT-GCCGTTTC
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      catgtcattcAACCACCTGG-TCCAGCG-CAGGACATGGTCGAAGCCGGC-GGA-ACGGAGTTGGGGTGCAGTGGATGACCGTGGCT-TTCCTAACGTGTTCTCGACAC--GCTCTCTGC-GGCTCGCCT--CGCCGCAA-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACGAGGTGGTTTTCTCCGTGCAG-CCGCCGAATCCCAGTCTTCA-ATGCTAGG--GAC--AACCAACTAAAAGCTGAGGATCGA-GGTCCAGCAGGCATACCAGCTGTT
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                                 TCTAGCCAA-GATCTTGCTTGCGATGGATAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTTCTTTGCACTTGTAGAG-GTGGATGATGGAG-GTGTCCTTGAAGTCCTGTGG-CA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCTGGTGAAGTTT-CT-C-AATCAGTGC-CACACCTCCCTCCTTGTAGA-TTTCAGC-
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTAAAGTGA--A-GAAGAGTTGCACAG--CG--TCGATTTCACTCTCTCGTCC--GAGGCACCT------AGTAGCAGGAC-TA-TC----ATGATTTGCGATGG-GACGGT-TACGGTGGATG-CCTAGAATATTCT--ACGTGC-CTC--AACCTGCTCT-TATCACTCCA-------TAGTGAGTTGCTG-TAACTGCCTTTATCGCCCG-TGAAC
gi|17                         :                                                                                                                                                                                                               gacatgcgttgggaccAG-GTTGTGTA--AGAT--C--A-CGATG-TTGTTCCATGCACTTTTC--CTGTAAGC-TGGCGGGGCGGCAAATA-CATGTCCGTAGTTTCTC---CCTG--CGCGGAAGCCACATTGAACTTTCAGGGAGGAGACCCTG-CTCAAGATGCCTCAGCAA-GCGAATT-AAGCAG
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ctacgaTGAATTATGATGTCATGGCTTGTGTG-TCATTTGGATTATAGTGAG-G-GA-GACTTGCCCG----GAATCAATCCCACTCTCTCGTCCT-GAATCGTC-GGGTCCAGTGGCAGGACAGAGTCGA-GACTGTTGGGGACGAACCAGGA-TGCAG
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         acCGCTGGACCAGGTGGTT-CCTCCGTGCAGTCCGCCGAAT-CCAGTCTTCACATGGCA-GGAAACAAAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTCg
gi|2                          :                                                                                                                                                                                                                          cctgTAGTGTTGAGTAG-AGGT--C--GGCG-TT-CTGCTCCTGACACTTT-C--CTGT-AGCCTGTC-TAGCAGCAAATACCATGTCGAATGTCCCGCG-TTCT---C-CGGAAACCACCATT-GCTCTCAGGTAGGAGGCCTTGGTTCGAGGTG-TTT-ATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTCCCGC-AAACTTGGCGGTTTCCTTTGCG--TGTAGAG-GTGGATGATGGTAAGCGTCCTTGAAGTCCTGTGG-CA-CTAG-TCTCGTGCTGC-AGATGAGCTGA-AATAGCT-GTGAAGTTT-CT-C-GATCAGGGC-CACACCTCCCTCTT---AGAATTTCAG--GG-GATGGAATCCGAACCAGGTGAA---TTTTGCC-TACGT-GAAAGTAGTCGGA-CT-----GCTTT-CTGAGATCTCATC-CAAGGTGGG----TGGGGC-----GTCCATGGTCTTCTT-CGA-CAGGGT--AC-TTGGGGT---AACCTGTCGATAGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGGCCATCTCCT-CAAAACCTTCCC---TTGTCGGTGATAA-GGGTTG-ACCC--CATCAGCACTGAG-GAGGGGAGACAGTGATCCTGAGGTAAGTA--GGG--CCAT-AGACTTTCCTTCAAACTGT-CGT-AGAA--------GCGCTTCATGT-CGT---TCCTGTC-T--GCAA-GCCCTGAATCTCGTCCGCTTTG-CACTCAACCAGG-AATCCTGCATCTGG-CGCAA-TTC--ACT-TA-TAG---TTGTGAGCT-CGTAC-TTCCTCATG-TG------TCTTTCTTTAGATGCT---GATCTTAGTG---TCG-TCGAGATGTAGCTTTGTAGC-GCACGAGACGC----TTTTTCTCACTAGCAGCTGCTGGATCTCTGTGCAGTTCTC-GTCAAACCAG-CCCTTGTGCTTCCTTGTAGCTGTCCCGAGGCACTCCATGGCTGTGTTGTACAACCGTGTCACGGAGCGCAACGCCACGCTGTCCTCAACATCCTGGCCTTCTCAGCACAAAGGAGTC-AGGCGTTGCTCTCAAAGATGTCGGCAAAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATG-TCAGACGTTTT--------TTTTAAATTCATTCCCTGCTGTTGGCCAGCGTTTTGGGCTTTTAATCCTGTGGCTCTTTTGGGATGACGCGAATATTGAGTTTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTCTTTCGTGA--CTCGTATGTCTTGCCTGTC---CCTCC-TTAGCGATGACGTAGTCAATGAAGAGATCCAAT----------GCTTTGAGCGGGGATGCATTCCATGGACGTCCTGTTACGAGTAGGGAGGTTGAAGACGGTGGTTGGTGAGATCAGAAGGTTGTGCTCTGGCGCAA-GTCTGGAGTAGTAGTAGAACTGTTGCTGTTGAAGTTGCCGACTCCATGCTT-CCGATCACCTCCTTCGCCAGGA-ACGCTGCACACGACCAACTC-TCGCGTT-AAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAG-GGTGATGACA-----GTGTTTAGA-TCTC--TAAAACTTGTCCTT-GTCTCAGCT-------GGTT--GGTCATGGTGGG-GGCATTAGGCACTGA--CAATGGAGA----TGT-AATTCTGCCCATTGAGAAAGGGTGGGAGTCTCATCGTCATAAGACG-ATCGTTCACACTCTT--TGGGA--C-C-GGCCAACTTG-TCGACCAATGT-CCGTCTTGACTGC-AAGC-CAACTCCCTGCCTTCTCTCCTCTCTTCGG--GTCCGC-GT-C--AATCCAAAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCTCTC-TCTGCCAGCTCT-G-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATATCTG--GCGAGTTCTTTTGCAATGAGCGCTGTGCGTCTC-GGGGTCTCTCCTGACTC-GTCCCTGTCAAGAAGCGTTGCGAACGTTCCAAGCGGCAAGGGTCAGTGGTGTAA-TCCTGTTTTCCTTTTGA-AGTTTTTCT---
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                            TAAGGCG-GTT-GAGCAGAACTCTAGCCAAAGATCTTGCTTGCGATGGACAGCAATGAGATTC-CGCGATGATTGTC--GC-AAACTTGGCGGTTTCCTTTGCGTTTGTttcgt
gi|21                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGTTTACCCACACCTG-TCGCTTCGTCGCTCGCCTG
gi|3                          :                                                                                                                                                                                                                               AG-GTTGTGTAGCAGAT--CACGATG-TTGTTGTTCATGGCACTTTTTTTCTGC-AGC-T----TGGCGGCGA-TATCAGGTCCGTAGTTCCTCGACGCTG--CGCGGAAGCCACATTG-ACTTTCAGGGAGGAAACCCTG-CTCAAGATG-CTCAGCAAG-CG-ATTTAAGCAGA-CACGGGCAAT-GATTTTG-TTGCTATTGACAG-GGAGATATTCTCTCG-TGATTGTC--AC-AGGACTGGCGATTCCCTTTGCGCTTGTAAAT-GTGAACAATCGTG-GTATTCT-GAACTCTTGCGGGTAGTT-GCTCTCG-ATTCCCA--TGACCTCATAAAAACTTGTCA-GTTGACTGCAGAT--GGGTTCGCACCTGTCT--TTGTAG--TCTCAGCAGG-GATGGCGTCGGGGCCGGG--AGCATTTT---CACAC-T-G--CGTCATCTG--CTTGGTGGCTTTGCTGA-CTTTCTTCTTTAG--GGG----AGGGTT-----GTCAA--GT-T-CTT--GATTAACGCC-AC-CTGTGGTAG-G-C--GGCAATTGT---TCA---TCATTGAT-C-GTA-GTTAGGGCGA-TTTGATA--CGCTAAATCGAA--GTT-TCGCCCATCTC-T-CAAGG-ATTTCCTTTTTGTCTGTTGCAG-GGTTTT-A-CCAAAATC-GCGCTGAGTAAAGGGAG-----GGTCCTGTTG-AC-TGT-GGGTTCCATCAGAC--TGTTTCAGGGCATCCGT-AGAATTTCCTTCGAG--TCGTGTGCGT-CGGGC-GTATT--------CCTTGGATTTCTTCAGCTTAGGCACT-GAGCAGGCAATCCTGCA--T-G-AGCGAGTTC---CTGGACTGGACTT-----GCTGCGTTTG-----CA-GATGAAAGCAGCTTTTCTT---TACT---GGCTTGAG-GGATTCGTTTTTGGTG-AGGCTCGGAGCAGC-C--GATG-----TTTCTC-CCTCAG-AAATG-TGGATCTTCATGTCGTTCTCAATCAAACAAGCTCCTGGTG
gi|3                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaTTAAGTTTGGCT-ATGTTGAG----CTTAGCGACAGCT-----TTT-TGCCCTGT----GGTT--TCCGCTGGG---------CTG---------------GATAAAGAGGTTCAT-TTTGGAGACGATCAAGACGATGATCCGTCCAGCAGTCCTGCACACAACATGGCC-TTTGTCAGTCTC-TGCGTCCTGCCTGTCCTTGGTCCAGTA---ATGACGTAGT-------------CAATAGGTGCCAGTGCTTTGATTGAGGGTGCCT-CCATGAAGGTT-TGTTTCGAGTTGGCAGCCGGAACATGGT-GTTGGT--GATGGTCAGGTCATG-TTT-GCGCAACATCT-GAGGAGGAGT----CCG-TGCTATTACATTTGCCTACTATATGTTTgtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtttaagtttggctatgttgagcttagcgacagctttttgccctgtggtttccgctgggctggataaagaggttcattttggagacgatcaagacgatgatccgtccagcagtcctgcacacaacatggcctttgtcagtctctgcgtcctgcctgtccttggtccagtaatgacgtagtcaataggtgccagtgctttgattgagggtgcctccatgaaggtttgtttcgagttggcagccggaacatggtgttggtgatggtcaggtcatgtttgcgcaacatctgaggaggagtccgtgctattacatttgcctactatatgtttttttccc
gi|4                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaaggttgtgtagcagatcacgatgttgttgttcatggcactttttttctgcagcttggcggcgatatcaggtccgtagttcctcgacgctgcgcggaagccacattgactttcagggaggaaaccctgctcaagatgctcagcaagcgatttaagcagacacgggcaatgattttgttgctattgacagggagatattctctcgtgattgtcacaggactggcgattccctttgcgcttgtaaatgtgaacaatcgtggtattctgaactcttgcgggtagttgctctcgattcccatgacctcataaaaacttgtcagttgactgcagatgggttcgcacctgtctttgtagtctcagcagggatggcgtcggggccgggagcattttcacactgcgtcatctgcttggtggctttgctgactttcttctttaggggagggttgtcaagttcttgattaacgccacctgtggtaggcggcaattgttcatcattgatcgtagttagggcgatttgatacgctaaatcgaagtttcgcccatctctcaaggatttcctttttgtctgttgcagggttttaccaaaatcgcgctgagtaaagggagggtcctgttgactgtgggttccatcagactgtttcagggcatccgtagaatttccttcgagtcgtgtgcgtcgggcgtattccttggatttcttcagcttaggcactgagcaggcaatcctgcatgagcgagttcctggactggacttgctgcgtttgcagatgaaagcagcttttctttactggcttgagggattcgtttttggtgaggctcggagcagccgatgtttctccctcagaaatgtggatcttcatgtcgttctcaatcaaacaagctcctggtggtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtCAACGCGTGGCATTAAAATCACCACGAA--AT-AGTTTATCAGACTTGGGAATAG-A-TGA--ACAAGGGAGTG---AGCCTCCTCGTAAGAACTGTCTTTAGTTTCCTTTCCTCGGAGGTTTTGTTCATGTTGGAAGGCATA-GAC-CTGGATCAGAGGTGACATTTGT-CTTACGGTCCA-CAGGA-------GGAGCTGCATCTTCATA--CCCTATCATTAAGACTC----AGGAATGC-TTTGCAAGCTTTTCTGGAC-ATGTGTTGTTTTGA-TGCGAAAC-CCACT-CCTGAC-TCGCGTCGCTCTTC-GCTGCTTGC-GCCC--ACTCCAAAG-AAGGTGTAACC-GC-TTCCCCATCTCAGTTAATTGGCCTTTTGTCTGCAAG--CG-A-GTTTCAACTAAGAGTCGCAAATCATCGATCTTGTATTTTTTGCCAGTTCCTTTGCTACTAGTGC-GTTCGTCTCTCTGGCCTAT-CTT-TTT-GGTGTTGTCAGTAA-CGTT-CTGACGTTTC---CA-TGATGCTAGGTGA-GCAAACCTTT-GCT--TTT----ATTCTTTCT---AAGTATTTCGAGACCGCCAAAGGGGT-------GATCTCCGCCAGCTGCG-TATGCTTAC-AGGGTGG--TAGTAGGCAGGCTATTTATAGTGGCAACCTTTCTTAGCCCGTTCCTCAAGCTGTGGAGGCGAGCAGAGTCGATCCAAAAGAGGACTGCTCCGTTCACTCAC-GAGGCTGCCGGGCTCCATCG-TGCCTTGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCG-CTGTGGTGCAGGTTCGCGTCTACCGCTCCCAGTGTATCCTCAGCTACTTTCTTCGCCGCTT-CCCATCGCCACAGGAC--TTGAATAGGATGACTGGATG----------TGATGTATCGACTTGCG-G-TGACTTGGATTATAGTGAGGG-GA-GACTTGCGCA----GAATCGGCCTCACTCTCTCGTCT--GAATCGCC-GGGTCCAGTGGCAAGACAGAGTC-C-GACGG-TGGAGA--GAATCAGA-TGCttttccc
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cattccagacatggtagtcggcaCTGTCTTCAGTTTCCTCAA------GGTT--CGTCCTTGTTGT-AGCATA-TACACTGA--TCAGGGTGACATTTGT-CTTGCT-TCCA------AAG---GGGAGCTTTATCTTCATAATCCT-ATCACTAAGACCTTC--AGGAA--TGCTTGTAAGCTT--CTGGAC-ATGTGTTGTTTCGATGGAGAAACACAA-T-CCTGAC-TCGTGTCGCTCTTC-G----CTGCTGTTCTCACTCCAAAAGAACATGTAACC-GCTACCA--TTCTCAATTAATTGGCCTTTG-TCTGCAAA--GC-GAGTTTCA-CTAAGAGCTGCAA--TATTAATCTTGTATCTG--GCCAGTTCCCTTGCCACTACTTCAGTTCATCTCTCTGGCCTTT-CTG-CTTTGGTGTTATCAAGTAACATT-CTAACGTTCC-----ATGATGCTAAGGTGCGCAA-CTTTG-TCGTCTT--------CTTTCT---A-GTATTTCGA--CTGC--------TAAAAGGGGATCCCCGCCAGCTGCAGTATGCTAACCAGGGTGGATTA--AAACAGGCTATTT-TAG-GGCA-CCTTTTCTAACCCCGTCCTCATGCTCTGGAGGCGAATAGAG-CGATCCTAAAGAGGACTGTTCGGT-CACTCA-GGAGGCTGCCGGGC---ACCATTGTCTTGGTCCAATAAAGGACGATCACTTAAGCTTGTCCTAAACCGCCCATG-CGTAGGGTCGCAACTACAACTCCCAGTGTATCCTAACCCA-CTGCTTTGCCGCTTCAACATCGCGACAGGGCT-TAGAA----------GGATGACT-GAATGGTGATGTCATGACCTGCGCG-TGACTTGGATTATAGTGA--GTGA-AACTTGCGCA----GAATCGACATCACTCTCTCGTCCT-GAATTGCC-GGATCCAGTGACA-----------A-GACAGCTGGAGACGcagc
gi|6                          :                                                                                                                                                                                                                                      gGTAG-AGAT--C--GCAG-TG-CTGCTCTTGGTATTTCTC--CTGG-AGT-TGGC-GCGCAGCAAATATCATGTCCGCTGTCCCACG-TTCGG--CGCGGAAGTCGCACTG-GCTTTCTGGGAGGAGTCTTTT-TTCAAGGTG-TTGGATTAGACG-GTT-TAGCAGTACACGAGTCAG-TATCTTCCCAGCTATGGACTGGAGGGAGATGC-CTCTGCGATTATT--GCAAGAC-TGACGGTTTCCTTTCCTCTTGTAGAT-GTCGACAACGCTG-GCATCCTTGAACTGTTGTGG-GA-CT-T-TTTCCTCGTGCCACTTGGGTT--------------AGATTT-CT-G-TATTATGA--CGTGCCTCCTGCCTTGTACA-CTTCTGC-AGTGATAGatcaaagatgcag
gi|7                          : gctgaagagggtcggagccagcatgcagcactgttttacaccgtttgtcactgtgaaggcatctgactcgtctccatcatctagtaccttcaccatcatgccattgtggaaatgtcgaacaaacgtggtaaacttgctggggcagccgaatttttctatgatcttccataagccctccctgctgaccgtgtcaaaggcctttcagatcgacaaatgtcatATAG-GTGGAGTAG-AGGT--A--GGCG-TT-CTGCTCCTGACACTT-----CTGT-AGC-TGTC-TAGCAGCAAATACCATGTCGATAGTCCCGCG-TTTTTTTC-CGGAAACCACACTG-GCTCTCAGGTAAGAGGTCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAATTCTATTCAA-GATCTTGCTTGCGATGGACAACAGTGAGATTC-CGCGATGATTGTT--GT-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGAG-GCGTCCTTGAAGTCCTGTGG-CA-CT-G-TCTCGTGTTGCCAGATGGGCTGA-AACACCTCGTGAACTTT-CT-C-GATCAGGGC-CACATCTCCCTCCTTGTAGA-TTTAAACTGG-AATGGAATCCGAA------------------C-CAC-TGGAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATC-CAAGGTGGG----TAGGGC-----GTCTATGGTCT-CTT-CTA-CAGGG---AC-TTGGGGTA--G-CCTGTCGATGGC--ATCA---TCGTTGAT-G-GTG-G-AAGTTCTG-TTCAGGA--TGCT--TTTAAAATGTT-CCGCCCATCTC-TGCAAAACTGTT-----TTGTCGGTGATAA-GAGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACAGTAATCCTGAGGTAG-TA--GGA--CCAA-AGAC-TTCCTTCAActttgccacaggagagttgctttacagtctttttgactgcttcttcagtgaggaggttgtccagtttttgct
gi|8                          :                                                                                                                                                                                                                            gacAG-GCTGTGTAG-ATAT--C--A-CGATG-CAGTTCCATACAGTTTGC--CTGT-AGC-TGAC-AGGCGGAAAATATCATGTCCCTTGTTCCTCA-ACCTG--CGCCGAAGCCATATTG-GCTTCCATCGAGGAGACCCTG-CTCAAGATA-CTTCAGCAAGCG-ATT-AAGTAGAACACGGGCAAG-GATTTTGTCTGCTATTGGTAGGAGGGATATCT-CTCGGTGATT-TC--AC-AGGACTAGC--TT---TTTGCGTTTGT-GAGTGTGG
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ctacga-TTTCAGCAGG-GATGGCGTCAGGGCCGGG--AG---TTTCC-C-CAT-T-GA------TC--ATCT-----GGTTT-CT----TCT--TC-AGAGGGAGGGTTTTCGAGTTCTTAGTTTAATGTCG-CTTACGA-AAG------------------G-CCTGT-GGTTGC--TTCA---TCATTAATCG-CTG-C-AGG--ATGATTGAGTA--CGTT--ATCGAAGTGTTttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggttttcagcagggatggcgtcagggccgggagtttccccattgatcatctggtttcttcttcagagggagggttttcgagttcttagtttaatgtcgcttacgaaaggcctgtggttgcttcatcattaatcgctgcaggatgattgagtacgttatcgaagtgtt
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ctacgaaggctgtgtagatatcacgatgcagttccatacagtttgcctgtagctgacaggcggaaaatatcatgtcccttgttcctcaacctgcgccgaagccatattggcttccatcgaggagaccctgctcaagatacttcagcaagcgattaagtagaacacgggcaaggattttgtctgctattggtaggagggatatctctcggtgatttcacaggactagctttttgcgtttgtgagtgtggttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggtGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACTGTTGCTGTTGAAGTTGCCGACTCCATGCTTCCCGATCAC-TCCTTC-CCAGGAGACGCTGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTA
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGACC-A-ATGTCGTCTTGACTGCAAAGC-CAACT-CCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgaccaatgtcgtcttgactgcaaagccaactcc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): GCTGTACTGCTCTCAGCCTTTGGGAGGATCTGACTCGTTTTCATCAAGACCCCCAGTAACCCCCCCCCATTCCACCACTGCATGCCATTGGGGTAACTGGGCTATGCCAGAGCAAGACAAAACTTGCTGATGCAACCAAATCTTCCTTAACCAAAAATCCGCCGAACTTCTAGCCAAGTGACGGCCAATACTTTTCCAATGGTTCACTTGTTGACCTCGGTCCGAAGGCCTTTGCCACAAATCGACAAAGGTCATAAGTAGCAGGTCACAGTG






Alignments
lowQualScore                  :                                                                                                                                                                                                                                              1111  1                                                                                                                                                                                                                                                                                                                              222                                                     2                     5555555555555       1            11  22222                   111                        1111     33333333333           11             111   111        111   111                11    111          1          1  2     2222     11             1      111  11             1        111              11  22   11    1    111            11   1   99999999999999999         33333    22222222                        1            1            222     1   222     1   333333333                 111  333333        11      111  1       111   1        1          22222222    33333      1 111                             1                                                              1                    1         1                  1                            11           1                                  1                      33333333333            2222    11         777777777777777777777777777               1           1                         1                1       11                           1   11           666666666666666666666666666                 11                                         1      11                   1      1                 1                                         11      1              1            1                                                1          22222        11    11                      111  1  22222             11    1          11         2222              4444444   11                 2222222           2222       222222                   1                                  1               11      1    11         1           1  1             11           11        2222222      1             11                 11                                           1                          1        33333333             1    2      11       444444444        22222       111     66666666666                            1       1   22          1  1   1   11                                         1                       11                           1                         5555555555                 111                                       1                                777777777777777       11                         1                  11             4444444                    11        1                       222                                                 1    11        11          44444444       22                    1                                          1                        22    11  1                         1               
lowQualScore                  :                                                                                                                                                                                                                            5    1    5    66 0000  0 77   1   0        3 66     5  5  2 0  5                   1     1  666  999 5           1   5        0     0     5         5   5        5   5         0        5                     2  0       5    0        66   5        2            0        5     0       6                  6  1 6  777           1         2 6  1 1  222  6      6  777   1    77 0                  5       2  6     0         1  8888888888888 8   8 6 777  0   5 11  00000     8    88    1  000   5   1          6     2222  3  00000000000  8      1 99   0      1  777   444    0   111   444   88   8       11    222     3    5          0  0     1111     77             0      111  33    3        0        666        2   3 00  55   33    0    666         0  33   3   88888888888888888 0   6   66666 3  44444444              1  1   44 0    2       0            444  2  0   444  8  0   333333333   7     55      444  888888      0 00 0    777  0   6   777   0  0     0  0       66666666    55555      0 111  8  0  2         0          0          8                      1   1       0                0                    3         3                  3               7            88           3                 0         0      0  2   3    6      6   11111111111  33        1111    22   0     333333333333333333333333333               0           0                         0      0         0       33   2               99      0   22           555555555555555555555555555                 99     6      6                            3      88    0       0  2   0      0    2          3 0    3        1                   6       33      3      6    0  3            0       3             33  2                      5     3    55555   3 0  44    55              7     1 777  0  55555             00    0 1   3    33   1  4  4444   33 1  2    0000000   33            1    7777777      1 1  0000 44    111111     6   8  8  1 8 0            3   6    8     8    1 0  1 2  1       88 0    0  6 33 1       0        1  5  0   444   1   88    1      00     1  4444444      0     1  1    33       1         33  1     0     1  2 1   9  1      555     0 0   9    1 2          6    0 1      33333333   1 1 1     0    0    2 11  2    888888888        77777       222     88888888888              0   6      1  2       2   00          3  3   3   44              1         44               3                     3 44 0                  999    2     0                   5555555555            6    444           1    3               1      0              8                 111111111111111     0 00     7      1          6 0            1     11             3333333     1              44        5  5     0 1       999  000     3      1  9999   6           7       7      3    99   6    88          00000000  1    00     6              3     7              7      0    7         3          6      6 6    00    88  3                 7       3               
lowQualScore                  :                                                                                                                                                                                                                            .    .    .    .. ....  . ..   .   .        . ..     .  .  . .  .                   .     .  ...  ... .           .   .        .     .     .         .   .        .   .         .        .                     .  .       .    .        ..   .        .            .        .     .       .                  .  . .  ...           .         . .  . .  ...  .      .  ...   .    .. .                  .       .  .     .         .  ............. .   . . ...  .   . ..  .....     .    ..    .  ...   .   .          .     ....  .  ...........  .      . ..   .      .  ...   ...    .   ...   ...   ..   .       ..    ...     .    .          .  .     ....     ..             .      ...  ..    .        .        ...        .   . ..  ..   ..    .    ...         .  ..   .   ................. .   .   ..... .  ........              .  .   .. .    .       .            ...  .  .   ...  .  .   .........   .     ..      ...  ......      . .. .    ...  .   .   ...   .  .     .  .       ........    .....      . ...  .  .  .         .          .          .                      .   .       .                .                    .         .                  .               .            ..           .                 .         .      .  .   .    .      .   ...........  ..        ....    ..   .     ...........................               .           .                         .      .         .       ..   .               ..      .   ..           ...........................                 ..     .      .                            .      ..    .       .  .   .      .    .          . .    .        .                   .       ..      .      .    .  .            .       .             ..  .                      .     .    .....   . .  ..    ..              .     . ...  .  .....             ..    . .   .    ..   .  .  ....   .. .  .    .......   ..            .    .......      . .  .... ..    ......     .   .  .  . . .            .   .    .     .    . .  . .  .       .. .    .  . .. .       .        .  .  .   ...   .   ..    .      ..     .  .......      .     .  .    ..       .         ..  .     .     .  . .   .  .      ...     . .   .    . .          .    . .      ........   . . .     .    .    . ..  .    .........        .....       ...     ...........              .   .      .  .       .   ..          .  .   .   ..              .         ..               .                     . .. .                  ...    .     .                   ..........            .    ...           .    .               .      .              .                 ...............     . ..     .      .          . .            .     ..             .......     .              ..        .  .     . .       ...  ...     .      .  ....   .           .       .      .    ..   .    ..          ........  .    ..     .              .     .              .      .    .         .          .      . .    ..    ..  .                 .       .               
lowQualScore                  :                                                                                                                                                                                                                            0    0    0    99 5555  0 55   1   8        1 99     0  0  8 2  0                   0     0  555  444 6           1   0        7     4     7         7   3        0   0         8        0                     5  2       0    9        99   0        5            2        7     7       7                  7  0 7  555           0         5 7  0 0  555  7      7  555   0    77 7                  7       9  7     6         4  0000000000000 0   0 0 000  6   0 88  00000     0    66    0  888   6   0          0     2222  2  44444444444  0      0 00   8      0  000   000    8   000   222   88   0       00    444     8    0          0  0     2222     55             0      000  88    2        0        222        5   2 88  55   88    0    555         7  33   3   00000000000000000 7   7   33333 2  88888888              0  0   22 8    5       0            000  5  0   222  8  0   555555555   0     88      000  888888      2 22 8    555  0   5   555   0  2     0  2       00000000    00000      0 555  8  2  5         2          0          0                      0   0       2                0                    3         3                  3               3            33           3                 7         2      0  5   2    5      5   22222222222  55        2222    55   8     555555555555555555555555555               0           0                         0      2         0       88   5               55      0   55           555555555555555555555555555                 77     7      7                            3      33    7       7  5   0      0    5          2 0    2        0                   7       33      3      7    7  3            0       2             55  5                      0     2    00000   2 8  33    77              0     0 555  8  00000             22    0 0   2    88   0  2  0000   88 0  5    8888888   88            0    0000000      0 0  5555 55    000000     5   8  0  0 0 6            2   4    0     0    0 0  0 5  0       88 8    0  5 88 0       0        0  5  0   555   0   55    0      88     0  2222222      0     0  0    88       0         88  0     2     0  5 0   8  0      222     2 0   2    0 5          5    0 0      55555555   0 0 0     5    0    5 22  5    555555555        77777       333     77777777777              7   7      0  0       0   77          3  3   3   77              0         33               3                     7 77 7                  333    0     7                   7777777777            7    000           0    7               0      0              8                 777777777777777     7 66     0      0          5 0            4     22             2222222     4              00        5  2     7 0       777  555     7      0  2222   7           3       3      3    33   7    33          77777777  0    77     7              3     0              3      7    3         3          7      7 7    77    33  3                 3       3               
consensus                     :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AGAT--C--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GCA-GACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATC-CGAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-T--AGGGC--AC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAA-A-G-G-GGGATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCAACCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGTTCGCTCAGGAGGCTGCCGGGCTCCACCGCTGCCTCGGTTCAATGAAGGACGACCA-----GCT-TGTCCTGAGCCGCCCGTGGCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGACT-T-G--GGGAT-A--GGATGACTTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA---CGAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC-CC-CGNCGCGA-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
Reference ( family-425 )      :                                                                                                                                                                                                                        ATAG-GTTGNGTAG-AGAT--C--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GCA-GACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATC-CGAGGTGGGTGGGGCGTCCATGGTCT-C--TTCGA-C--AGGGT--AC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-CGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAA-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTCGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCATTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TNGGCACTGA--CAANGGCGACATTTGTCTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-CCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTCTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGC----A-G-GTAGGATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCAACCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGTTCGCTCAGGAGGCTGCCGGGCTCCACCGCTGCCTCGGTTCAATGAAGGACGACCA-----ACT-TGTCCTGAGCCGCCCGTGGCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGACT-TTGAAGGGATGA--GGATGGCTTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA---CGAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CCCGCCTCGNCGCGA-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
gi|1                          :                                                                                                                                                                                                                        ATAG-GCGGAGTAG-AGGT--C--GGCG-T-GCTGGTCCTGACACTTTTC--CTGCC-CC-TGTCTAC-CAACAAATACCATGTCGATAGTCCCGCGTT-CTT--TCCAGAAACCACACTGG-CTCTCAGGTAGGAGGCCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-TGCGATGATTGTC--GCA-GACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGTG-GCGTCCTTGAAGTCCTGT-GGGA-CT-G-TCTCGTGCTGCTAGATGAGCTGA-AACAGCT-GGTG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCCTTGAAGA-TTTCAGCTGG-GATGGAATCCGAACCAGGT-GA---TTTG--C-CAC-TTGAAAGTAGTCGGG-CT-----GCTTT-CTGA-ATCTCATC-CAAGGTGGGTAGAGCGTCCATGGTCT-C--TTCGAAT--AAGGTTCACATTGGGAGAAAGCCTGTCGATAGCTCATTAATATCGT-GAT-GCGTGTA-AAGTCCTG-TTCAGGAACCGCA--GCCGAAATCTTCTCGCCAATCT-CTTCCAAA----CCTTTCCTTGTCGATGATAAAGGGTTGTA-CC--CATCAGCACTGAG-GAGTGGAGA-GGTGATCCT-AGGTAA-TATTAGG--CCAT-AGAC-T-CCTTCAAGCTGTC-GTAAGAAAG-----CAGAGAGC--CATGTGCGTATACACTGTCTTCCGCAAAGCCTTGAATCTCGTCCGGTTTGCTACTCAACCAGG-AATCCTGCATCT-GGCGCAACTTC--ACTTGA-TGG---T-----GCTACGTACGTTCCTCA-G-TGT-----GTTTTTCTTAGATGCT---GA-CTTTGGG---TCG-TCGAGATG-AGCTTTGTAG--GCAC--GACG-----CTTTTC-CACTAGCAGCTGCTGGATCTCTGTACAGTTCTC-ATCAAACTAG-TCCTTGTGCTTCCTTGTAGCTGGCCCGAGACACTTCATGGCTCTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACACCCTGGCCTTC-CACCACAGTGGAGTCTAAGCGTTGCTCC--AAGATGTTGGC-AAAAGACTGCTTGATGTCGCTGACCTTTAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCACTCCCTGC----GGCC-GTCTCTTGGG---------CTG---------------GATGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCACACATGGTC-TTCGTGA--CTGGTACATCTTGCCTGTTACTCCTCC-TTA-CGATGACGAAGT-------------CAAT----------GCTTTGAGCGGAGATGCA-TCCAT-GACGTCCTGATTCGAGTAGGGAGGTTGAAGACAGT-GTTGGT--GATCAGAAGGTCATGCTCT-GCGCAT-GTTTGGAGTAGTAGTAG-ACCGTTTCTGTTGCAGTTGCCGACTCCATGCTTCCCGATCA-CTCCTTC-CCAGGTGACGTCGT-CACGACCAACTC-TCGCATTAAAATCACAAAGAATAATGAGTTTGTCTGCGTTGGGAACAACGGTGATGACA-----GTGTTCAGG-TCTTTATAAAACTTGTACTTGGTCTCAT---CTGGG-----TTGGTCATGGTGAG-GGCA-ATGGCATTGA--CAATGGCGA----TGTACTTCTGTCCA-TGAGAAAGA--GGGAGTCTCATCGTCAT----TC-GTCATTCACACCCCTTGGGGGA--C-CGTCCAA-CTTGCC-AATC-A-ATGTCGTCTTGACTGCAAAGT-CAACT-CCTGCC-TCTCTTCTCTCTTTGG-GTCCGC-GTCC--AATCCATAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCCTCT-CCTGCCAG--CCTG-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATACCTG--GCGAGTTCACTTGCAATGATTGCTGTGCGTCTCTAAGGTATCT-CTGACTCGTCCCTGTCAAGAAGCGTG-CGAACGTT-----CAGCAAGGGTCAGTGGTGTAATCCTTGTTTTCCTTTTTGAA-----TTTTTTCTTTCA-TTGTTTC--GACCGC----ATGTGTAGGCCCCCCTCCAGTCGCGGTAAACTGGCTAGAGTAGGTAG--GGCAGGCAATGTT-TGG-GAC-ACCTTTTCTAGTCCGCTCTTCATGCCATGGAGGTGAGCAGGG-CGTTCCTAAAGAGGGCTGCTCAG-TCGCCTAGACGGCTGCCGAAATCTACTGCTGCTCCGGTTCAGTGAATAGCGACCA-------TATGGCCTGAGCCGCCCGT-GTGCAGGTTTGCGGCTACGACTACCAGTGTACTCACACCTG-TCGCTTCGTCGCTCGCCTGTCGCCACAGGACTATTG--GGGATGAAGGGATGGTTTGAAGGATGATAAGATGACTTGCGCGATGACTTTGTTTAAAGTGA--AAAGAGTTGCGCATCTCG--TTGACTTCACTCTCTCGCCCAAAAACCATCTGGGTCCAGCAGCAGGACATGGTCGA-GACGGCTGGAGACGGAGGTGGA-TGCAGTGGATGACCGTGGC-TTCCTA-CGTG-TATCGAAAC--GCTCTCTGTG-CT--TCACGACGCG--TTGCTGGGAATCGCTTTTCT-GCCCGTTGAACCAGGTGCTTTCCTCCGCGCAGTCCACCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAAGATCCAGCA-GCATGCCAGCTGATC
gi|10                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCAG-TCCGTGTGCTTCCTTGTAGCTGTCCCTAGGCACTCCATGGCTGTGTTGTAC-ACAGTGTCACGGAGCGCAGC-CCACGTTGT-CTCAACATCCTGGCCTTC-CAGCATAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTAATTCCCTGT----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTATGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CGAT----------
gi|11                         :                                                                                                                                                                                                                          AG-GTTGTGTAG-AGATATC--GATG-T---TGTTCTATGCACTTTTC--CTGTA-GC-TAGCTGG-CGGTGAATATCAGGTCCGTTGTTCCTCGGC-TTG--TGCGGAAGCCATATTGA-C
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       catgctgaagaattttggggctaggacacatccctgtttgaccctgtttgccactgaaaggttttggaaggctctccatcaacaaagactcggaccattatgtcatcatggaactggcggactatagtaatggacctacttggggagtcatacctttccgtcattttccagagtccatcacgactgactgtatcaaatgccttagtcaggtctacaaCTGT-TT--GCAAAGCCCTGAACCTACTTAGCT-GATTGCTCAGCCAGG-AGCTCTGCATCTCA-CGCAG-TTTTTGCTGGA-TAA---T-----ATAACGCATGTTCCTCA-A-TA------GTTTTTGG-GGGTGCTATTGA-CTTCGGT---TCG-TCAATGTG-TGTCTTGTAG--ACCT--GATGGGGTTTTTTTC-CG--AAAAGTTGCTGCATTTTCCCGCAGTTTTC-GTCAAACCTG-TCCTTATGCTTCATGGTAGCAGGTCCTTAGCACTGCTTGGCTGTGTTGTAT-GCCGTTTC
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           catgtcattcAACCACCTGG-TCCAGCG-CAGGACATGGTCGAAGCCGGC-GGA-ACGGAGTTGGGGTGCAGTGGATGACCGTGGCTTTCCTAACGTGTTCTCGACAC--GCTCTCTGCGGCTCGCCTCGCCGCAA-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACGAGGTGGTTTTCTCCGTGCAG-CCGCCGAATCCCAGTCTTCA-ATGCTAGG--GAC--AACCAACTAAAAGCTGAGGATCGAGG-TCCAGCAGGCATACCAGCTGTT
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                            TCTAGCCAA-GATCTTGCTTGCGATGGATAGCAGTGAGATTC-CGCGATGATTGTC--GCA-GACTTGGCGGTTTTCTTTGCACTTGTAGAG-GTGGATGATGGAG-GTGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCTGG-TG-AAGTTT-CT-C-AATCAGTG-CCACACCTCCCTCCTTGTAGA-TTTCAGC-
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTAAAGTGA-AGAAGAGTTGCACAG--CG--TCGATTTCACTCTCTCGTCC--GAGGCACCT------AGTAGCAGGAC-TA-TC----ATGATTTGCGATGG-GACGGT-TACGGTGGATG-CCTAGAATATTCTA-CGTGC-CTC--AACCTGCTCTTATCA-CTC----CATAGTGAGTTGCT-GTAACTGCCTTTATCGCCCG-TGAAC
gi|17                         :                                                                                                                                                                                                          gacatgcgttgggaccAG-GTTGTGTA--AGAT--C--A-CGAT-GTTGTTCCATGCACTTTTC--CTGTAAGC-TGGCGGGGCGGCAAATAC-ATGTCCGTAGTTTCTC--C-CTG--CGCGGAAGCCACATTGAACTTTCAGGGAGGAGACCCTG-CTCAAGATGCCTCAGCAA-GCGAATT-AAGCAG
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ctacgaTGAATTATGATGTCATGGCTTGTGTG-TCATTTGGATTATAGTGA-GGGAGACTTGCCCG----GAATCAATCCCACTCTCTCGTCC-TGAATCGTC-GGGTCCAGTGGCAGGACAGAGTCGA-GACTGTTGGGGACGAACCAGGA-TGCAG
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          acCGCTGGACCAGGTGGTT-CCTCCGTGCAGTCCGCCGAAT-CCAGTCTTCACATGGCA-GGAAACAAAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTCg
gi|2                          :                                                                                                                                                                                                                     cctgTAGTGTTGAGTAG-AGGT--C--GGCG-T-TCTGCTCCTGACACTTT-C--CTGTA-GCCTGTCTAG-CAGCAAATACCATGTCGAATGTCCCGCGTT-CT---C-CGGAAACCACCATTG-CTCTCAGGTAGGAGGCCTTGGTTCGAGGTG-TTT-ATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTCCCGCA-AACTTGGCGGTTTCCTTTGCG--TGTAGAG-GTGGATGATGGTAAGCGTCCTTGAAGTCCTGT-GGCA-CTAG-TCTCGTGCTGC-AGATGAGCTGA-AATAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCTT---AGAATTTCAG--GG-GATGGAATCCGAACCAGGTGAA---TTTTGCC-TACGT-GAAAGTAGTCGGA-CT-----GCTTT-CTGAGATCTCATC-CAAGGTGGGTGGGGCGTCCATGGTCTTC--TTCGA-C--AGGGT--AC-TTGGGGTA--ACCTGTCGATAGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGGCCATCTCCT-CAAAA----CCTTCCCTTGTCGGTGATAA-GGGTTG-ACCC--CATCAGCACTGAG-GAGGGGAGACAGTGATCCTGAGGTAAGTA--GGG--CCAT-AGACTTTCCTTCAAACTGT-CGTA-GAA-----------GCGCTTCATGT-CGT-T-C-CTGTC-T--GC-AAGCCCTGAATCTCGTCCGCTTTG-CACTCAACCAGG-AATCCTGCATCTGG-CGCAA-TTC--ACT-TA-TAG---TTGTGAGCT-CGTAC-TTCCTCATG-TG------TCTTTCTTTAGATGCT---GATCTTAGTG---TCG-TCGAGATGTAGCTTTGTAGC-GCACGAGACGC----TTTTTCTCACTAGCAGCTGCTGGATCTCTGTGCAGTTCTC-GTCAAACCAG-CCCTTGTGCTTCCTTGTAGCTGTCCCGAGGCACTCCATGGCTGTGTTGTACAACCGTGTCACGGAGCGCAACGCCACGCTGTCCTCAACATCCTGGCCTTCTCAGCACAAAGGAGTC-AGGCGTTGCTCTCAAAGATGTCGGCAAAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATG-TCAGACGTTTT--------TTTTAAATTCATTCCCTGCTGTTGGCCAGCGTTTTGGGCTTTTAATCCTGTGGCTCTTTTGGGATGACGCGAATATTGAGTTTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTCTTTCGTGA--CTCGTATGTCTTGCCTGTC---CCTCC-TTAGCGATGACGTAGTCAATGAAGAGATCCAAT----------GCTTTGAGCGGGGATGCATTCCATGGACGTCCTGTTACGAGTAGGGAGGTTGAAGACGGTGGTTGGTGAGATCAGAAGGTTGTGCTCTGGCGCAA-GTCTGGAGTAGTAGTAGAACTGTTGCTGTTGAAGTTGCCGACTCCATGCTT-CCGATCACCTCCTTCGCCAGGA-ACGCTGCACACGACCAACTC-TCGCGTT-AAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAG-GGTGATGACA-----GTGTTTAGA-TCTC--TAAAACTTGTCCTT-GTCTCAG---CT-GG-----TTGGTCATGGTGGG-GGCATTAGGCACTGA--CAATGGAGA----TGTAATTCTGCCCATTGAGAAAGGGTGGGAGTCTCATCGTCATAAGACG-ATCGTTCACACTC--TTTGGGA--C-C-GGCCAACTTGTC-GACCAATGT-CCGTCTTGACTGC-AAGC-CAACTCCCTGCCTTCTCTCCTCTCTTCGG-GTCCGC-GT-C--AATCCAAAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCTCTC-TCTGCCAGCTCT-G-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATATCTG--GCGAGTTCTTTTGCAATGAGCGCTGTGCGTCTC-GGGGTCTCTCCTGACTCGTCCCTGTCAAGAAGCGTTGCGAACGTTCCAAGCGGCAAGGGTCAGTGGTGTAA-TCCTGTTTTCCTTTT--GAAGTTTTTCTTTC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                       TAAGGCG-GTT-GAGCAGAACTCTAGCCAAAGATCTTGCTTGCGATGGACAGCAATGAGATTC-CGCGATGATTGTC--GCA-AACTTGGCGGTTTCCTTTGCGTTTGTgt
gi|21                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAGTTTACCCACACCTG-TCGCTTCGTCGCTCGCCTG
gi|3                          :                                                                                                                                                                                                                          AG-GTTGTGTAGCAGAT--CACGATG-TTGTTGTTCATGGCACTTTTTTTCTGCA-GC-T---TGG-CGGCGA-TATCAGGTCCGTAGTTCCTCGACGCTG--CGCGGAAGCCACATTGA-CTTTCAGGGAGGAAACCCTG-CTCAAGATG-CTCAGCAAG-CG-ATTTAAGCAGA-CACGGGCAAT-GATTTTG-TTGCTATTGACAG-GGAGATATTCTCTCG-TGATTGTC--ACA-GGACTGGCGATTCCCTTTGCGCTTGTAAAT-GTGAACAATCGTG-GTATTC-TGAACTCTTGCGGGTAGTT-GCTCTCG-ATTCCC--ATGACCTCATAAAAACT---TGTCAGTTGACTGCAGAT--GGGTTCGCACCT--GTCTTTGTAG--TCTCAGCAGG-GATGGCGTCGGGGCCGGG--AGCATTTT---CACAC-T-G--CGTCATCTG--CTTGGTGGCTTTGCTGA-CTTTCTTCTTTAG--GGGAGGGTTGTCAA--GT-T-C--TT-GA-TTAACGCC--AC-CTGTGGTA--GGC-GGCAATTGT---TCA---TCATTGAT-C-GTA-GTTAGGGCGA-TTTGATA--CGCTAAATCGAA--GTT-TCGCCCATCT-CT-CAAGGATTTCCTTT--TTGTCTGTTGCAG-GGTTTT-A-CCAAAATC-GCGCTGAGTAAAGGGAG-----GGTCCTGTTG-AC-TGT-GGGTTCCATCAGAC--TGTTTCAGGGCATCCGTA-GAATTTCCTTC---GAG--TCGTGTGCGT-CGGGC-GTATT--------CCTTGGATTTCTTCAGCTTAGGCACT-GAGCAGGCAATCCTGCATGA-G-CG-AG-TTC---CTGGACTGGACTT-----GCTGCGTTTG-----CA-GATGAAAGCAGCTTTTCTT---TACT---GG-CTTGAGGGATTCGTTTTTGGTG-AGGCTCGGAGCAGC-C--GATG-----TTTCTC-CCTCAG-AAATG-TGGATCTTCATGTCGTTCTCAATCAAACAAGCTCCTGGTG
gi|3                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaTTAAGTTTGGCT-ATGTTGAG----CTTAGCGACAGCT-----TTT-TGCCCTGT----GGTT--TCCGCTGGG---------CTG---------------GATAAAGAGGTTCAT-TTTGGAGACGATCAAGACGATGATCCGTCCAGCAGTCCTGCACACAACATGGCC-TTTGTCAGTCTC-TGCGTCCTGCCTGTCCTTGGTCCAGTA---ATGACGTAGT-------------CAATAGGTGCCAGTGCTTTGATTGAGGGTGC-CTCCATGAAGGTT-TGTTTCGAGTTGGCAGCCGGAACATGGT-GTTGGT--GATGGTCAGGTCATG-TTT-GCGCAACATCT-GAGGAGGAGT----CCG-TGCTATTACATTTGCCTACTATATGTTTgtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtttaagtttggctatgttgagcttagcgacagctttttgccctgtggtttccgctgggctggataaagaggttcattttggagacgatcaagacgatgatccgtccagcagtcctgcacacaacatggcctttgtcagtctctgcgtcctgcctgtccttggtccagtaatgacgtagtcaataggtgccagtgctttgattgagggtgcctccatgaaggtttgtttcgagttggcagccggaacatggtgttggtgatggtcaggtcatgtttgcgcaacatctgaggaggagtccgtgctattacatttgcctactatatgtttttttccc
gi|4                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaaggttgtgtagcagatcacgatgttgttgttcatggcactttttttctgcagcttggcggcgatatcaggtccgtagttcctcgacgctgcgcggaagccacattgactttcagggaggaaaccctgctcaagatgctcagcaagcgatttaagcagacacgggcaatgattttgttgctattgacagggagatattctctcgtgattgtcacaggactggcgattccctttgcgcttgtaaatgtgaacaatcgtggtattctgaactcttgcgggtagttgctctcgattcccatgacctcataaaaacttgtcagttgactgcagatgggttcgcacctgtctttgtagtctcagcagggatggcgtcggggccgggagcattttcacactgcgtcatctgcttggtggctttgctgactttcttctttaggggagggttgtcaagttcttgattaacgccacctgtggtaggcggcaattgttcatcattgatcgtagttagggcgatttgatacgctaaatcgaagtttcgcccatctctcaaggatttcctttttgtctgttgcagggttttaccaaaatcgcgctgagtaaagggagggtcctgttgactgtgggttccatcagactgtttcagggcatccgtagaatttccttcgagtcgtgtgcgtcgggcgtattccttggatttcttcagcttaggcactgagcaggcaatcctgcatgagcgagttcctggactggacttgctgcgtttgcagatgaaagcagcttttctttactggcttgagggattcgtttttggtgaggctcggagcagccgatgtttctccctcagaaatgtggatcttcatgtcgttctcaatcaaacaagctcctggtggtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtCAACGCGTGGCATTAAAATCACCACGAA--AT-AGTTTATCAGACTTGGGAATAG--ATGA--ACAAGGGAGTG---AGCCTCCTCGTAAGAACTGTCTTTAGTTTCCTTTCCTCGGAGGTTTTGTTCATGTTGGAAGGCA-TAGAC-CTGGATCAGAGGTGACATTTGTCTTACGGTCCA-C-----AGG--AGGAGCTGCATCTTCATAC-CCT-ATCATTAAGAC----TCAGGAATGC-TTTGCAAGCTTTTCTGGAC-ATGTGTTGTTTTGA-TGCGAAAC-CCACT-CCTGAC-TCGCGTCGCTCTTCGCTGCTTGC-GCCC--ACTCCAAAG-AAGGTGTAACC-GC-TTCCCCATCTCAGTTAATTGGCCTTTTGTCTGCAAG--CG-A-GTTTCAACTAAGAGTCGCAAATCATCGATCTTGTATTTTTTGCCAGTTCCTTTGCTACTAGTGC-GTTCGTCTCTCTGGCCTAT-CTT-TTTGGTGTTGTCAGTAA-CGTT-CTGACGTTTC---CA-TGATGCTAGGTGA-GCAAACCTT----TGCTTTT---A-----TTCTTTCT---AAGTATTTCGAGACCGCCAA-A-G-GGGTGATCTCCGCCAGCTGCG-TATGCTTAC-AGGGTGG-TAGTAGGCAGGCTAT-TTATAGTGGCAACCTTTCTTAGCCCGTTCCTCAAGCTGTGGAGGCGAGCAGAGTCGATCCAAAAGAGGACTGCTCCGTTCACTCACGAGGCTGCCGGGCTCCATCG-TGCCTTGGTTCAATGAAGGACGACC------ACT-TGTCCTGAGCCG-CTGTGGTGCAGGTTCGCGTCTACCGCTCCCAGTGTATCCTCAGCTACTTTCTTCGCCGCTT-CCCATCGCCACAGGACT-T-----GAAT-A--GGATGAC-TGGATG-TGATGTATCGACTTGCG-G-TGACTTGGATTATAGTGAGGGGAGACTTGCGCA----GAATCGGCCTCACTCTCTCGT-C-TGAATCGCC-GGGTCCAGTGGCAAGACAGAGTC-C-GACGG-TGGAGA--GAATCAGA-TGCttttccc
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           cattccagacatggtagtcggcaCTGTCTTCAGTTTCCT---CAAGG-----TTCGTCCTTGTTGT-AGCA-TATACACTGA--TCAGGGTGACATTTGTCTTGCT-TCCA-------AAG--GGGAGCTTTATCTTCATAA-TCCTATCACTAAGACCT--TCAGGAA--TGCTTGTAAGCTT-CT-GGAC-ATGTGTTGTTTCGATGGAGAAACACAA-T-CCTGAC-TCGTGTCGCTCTTCG----CTGCTGTTCTCACTCCAAAAGAACATGTAACC-GCTACCA--TTCTCAATTAATTGGCCTTTG-TCTGCAAA--GC-GAGTTTCA-CTAAGAGCTGCAA--TATTAATCTTGTATCTG--GCCAGTTCCCTTGCCACTACTTCAGTTCATCTCTCTGGCCTTT-CTGCTTTGGTGTTATCAAGTAACATT-CTAACGTTCC-----ATGATGCTAAGGTGCGCAA-CTTTGTCGTC--------------TTCTTTCT---A-GTATTTCGA--CTGCTAAAA-G-G--GGATCCCCGCCAGCTGCAGTATGCTAACCAGGGTGGATTA-AAACAGGCTAT-TT-TAG-GGCA-CCTTTTCTAACCCCGTCCTCATGCTCTGGAGGCGAATAGAG-CGATCCTAAAGAGGACTGTTCGGT-CACTCAGGAGGCTGCCGGGC---ACCATTGTCTTGGTCCAATAAAGGACGATCACTTAAGCT-TGTCCTAAACCGCCCATG-CGTAGGGTCGCAACTACAACTCCCAGTGTATCCTAACCCA-CTGCTTTGCCGCTTCAACATCGCGACAGGGCT-TAGAAGG---------ATGACT-GAATGGTGATGTCATGACCTGCGCG-TGACTTGGATTATAGTGA-GTGAAACTTGCGCA----GAATCGACATCACTCTCTCGTCC-TGAATTGCC-GGATCCAGTGACAAGACA------------GCTGGAGACGATCAAAGA-TGCAGcagc
gi|6                          :                                                                                                                                                                                                                           g-GTCATGTAG-AGAT--C--GCAG-T-GCTGCTCTTGGTATTTCTC--CTGGA-GT-TGGCGCG-CAGCAAATATCATGTCCGCTGTCCCACGTT-CGG--CGCGGAAGTCGCACTGG-CTTTCTGGGAGGAGTCTTTT-TTCAAGGTG-TTGGATTAGACG-GTT-TAGCAGTACACGAGTCAG-TATCTTCCCAGCTATGGACTGGAGGGAGATGC-CTCTGCGATTATT--GCAAGACT-GACGGTTTCCTTTCCTCTTGTAGAT-GTCGACAACGCTG-GCATCCTTGAACTGTTGT-GGGA-CT-T-TTTCCTCGTGCCACTTGGGTT----------------AGATTT-CT-G-TATTATGA--CGTGCCTCCTGCCTTGTACA-CTTCTGC-AGTGATAG
gi|7                          : gctgaagagggtcggagccagcatgcagcactgttttacaccgtttgtcactgtgaaggcatctgactcgtctccatcatctagtaccttcaccatcatgccattgtggaaatgtcgaacaaacgtggtaaacttgctggggcagccgaatttttctatgatcttccataagccctccctgctgaccgtgtcaaaggcctttcagatcgacaaatATAG-GTGGAGTAG-AGGT--A--GGCG-T-TCTGCTCCTGACACTT-----CTGTA-GC-TGTCTAG-CAGCAAATACCATGTCGATAGTCCCGCGTT-TTTTTC-CGGAAACCACACTGG-CTCTCAGGTAAGAGGTCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAATTCTATTCAA-GATCTTGCTTGCGATGGACAACAGTGAGATTC-CGCGATGATTGTT--GTA-GACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGAG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGTTGCCAGATGGGCTGA-AACACCTCG-TG-AACTTT-CT-C-GATCAGGG-CCACATCTCCCTCCTTGTAGA-TTTAAACTGG-AATGGAATCCGAA------------------C-CAC-TGGAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATC-CAAGGTGGGTAGGGCGTCTATGGTCT-C--TTCTA-C--AGGG---AC-TTGGGGTA--GCCTGTCGATGGC--ATCA---TCGTTGAT-G-GTG-G-AAGTTCTG-TTCAGGA--TGCT--TTTAAAATGTT-CCGCCCATCT-CTGCAAAA----CTGTT--TTGTCGGTGATAA-GAGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACAGTAATCCTGAGGTAG-TA--GGA--CCAA-AGAC-TTCCTTCAActttgccacaggagagttgctttacagtctttttgactgcttcttcagtgaggaggttgtccagtttttgct
gi|8                          :                                                                                                                                                                                                                       gacAG-GCTGTGTAG-ATAT--C--A-CGAT-GCAGTTCCATACAGTTTGC--CTGTA-GC-TGACAGG-CGGAAAATATCATGTCCCTTGTTCCTCAAC-CTG--CGCCGAAGCCATATTGG-CTTCCATCGAGGAGACCCTG-CTCAAGATA-CTTCAGCAAGCG-ATT-AAGTAGAACACGGGCAAG-GATTTTGTCTGCTATTGGTAGGAGGGATATCT-CTCGGTGATT-TC--ACA-GGACTAGC--TT---TTTGCGTTTGT-GAGTGTGG
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ctacga-TTTCAGCAGG-GATGGCGTCAGGGCCGGG--AG---TTTCC-C-CAT-T-GA------TC--ATCT-----GGTTT-CT----TCT--TC-AGAGG-G---AGGGTTTTCGAGTTCT-TAGTTTAA-T----GTC--GC-TTACGAAAG-GCCTGT-GGTTGC--TTCA---TCATTAATCG-CTG-C-AGG--ATGATTGAGTA--CGTT--ATCGAAGTGTTttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggttttcagcagggatggcgtcagggccgggagtttccccattgatcatctggtttcttcttcagagggagggttttcgagttcttagtttaatgtcgcttacgaaaggcctgtggttgcttcatcattaatcgctgcaggatgattgagtacgttatcgaagtgtt
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ctacgaaggctgtgtagatatcacgatgcagttccatacagtttgcctgtagctgacaggcggaaaatatcatgtcccttgttcctcaacctgcgccgaagccatattggcttccatcgaggagaccctgctcaagatacttcagcaagcgattaagtagaacacgggcaaggattttgtctgctattggtaggagggatatctctcggtgatttcacaggactagctttttgcgtttgtgagtgtggttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggtGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACTGTTGCTGTTGAAGTTGCCGACTCCATGCTTCCCGATCAC-TCCTTC-CCAGGAGACGCTGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTA
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     C-GACC-A-ATGTCGTCTTGACTGCAAAGC-CAACT-CCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgaccaatgtcgtcttgactgcaaagccaactcc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): GCTGTACTGCTCTCAGCCTTTGGGAGGATCTGACTCGTTTTCATCAAGACCCCCAGTAACCCCCCCCCATTCCACCACTGCATGCCATTGGGGTAACTGGGCTATGCCAGAGCAAGACAAAACTTGCTGATGCAACCAAATCTTCCTTAACCAAAAATCCGCCGAACTTCTAGCCAAGTGACGGCCAATACTTTTCCAATGGTTCACTTGTTGACCTCGGTCCGAAGGCCTTTGCCACAAATCGACAAAGGTCATAAGTAGCAGGTCACAGTG






Alignments
lowQualScore                  :                                                                                                                                                                                                                                              1111111                                                                                                                                                                                                                                                                                                                              222                                                     2                     5555555555555       1            11  22222                    111                         1111     22222222222           11             111   111        111   111                11    111          1          1  2     2222     11             1      111  11             1        111              11  22   11    1    111            11   1   99999999999999999         33333    22222222                        1            1            222     1   222     1   333333333                 111  333333        11      111  1       111   1        1          22222222    33333      1 111                             1                                                              1                    1         1                  1                            11           1                                  1                      33333333333            2222    11         777777777777777777777777777               1           1                         1                1       11                           1   11           666666666666666666666666666                 11                                         1      11                   1      1                 1                                         11      1              1            1                                                1          22222        11    11                      111  1  22222             11    1          11         2222              4444444   11                 2222222           2222       222222                   1                                  1               11      1    11         1           1  1             11           11        2222222      1             11                 11                                           1                          1        33333333             1    2               444444444        22222       111     1      2222                           1       1   22          1  1   1   2                                          1                       2                    1       1                         5555555555                 2                                         1                               3333333333333        2                          1                  11             4444444                    11        1                       111                                                 1    11        11          1  33333       22                    1                                          1                        22    11  1                         1               
lowQualScore                  :                                                                                                                                                                                                                            5    0    5  66   5555555 5    1   0        3 66     5  5  2 0  5                   1     1  666  999 5           1   5        0     0     5         5   5        5   5         0        5                     2  0       5    0        66  5    0    2            0        5     0       6                  6  1 6  777           1         2 6  1 1  222  6      6  777   1    77 0                  5       2  6     0         1  8888888888888 8   8 6 777  0   5 11  00000     8    88    1   444    6    3         6     2222  3  44444444444  8      1 99   0      1  777   444    0   111   444   88   8       11    222     3    5          0  0     1111     77             0      111  33    3        0        666        2   3 00  55   33    0    666         0  33   3   88888888888888888 0   6   11111 3  44444444              1  1   44 0    2       0            444  2  0   444  8  0   333333333   7     55      444  888888      0 00 0    777  0   1   777   0  0     0  0       66666666    55555      0 111  8  0  2         0          0          8                      1   1       0                0                    3         3                  3               7            88           3                 0         0      0  2   3    6      6   11111111111  33        1111    22   0     333333333333333333333333333               0           0                         0      0         0       33   2               99      0   22           555555555555555555555555555                 99     6      6                            3      88    0       0  2   0      0    2          3 0    3        1                   6       33      3      6    0  3            0       3             33  2                      5     3    55555   3 0  44    55              7     1 777  0  55555             00    0     3    33   1  4  4444   22 1  2    0000000   33            1    5555555      1 1  0000 44    111111     6   8  8  1 8 0            3   6    8     8    1 0  1 2  1       88 0    0  6 33 1       0        1  5  0   444   1   88    1      00     1  4444444      0     1  1    33       1         33  1     0     1  2 1   9  1      555     0 0   9    1 2          6    0 1      33333333   1 1 1     0    0    2 33  2    888888888        77777       222     2      1111             0   6      1  2       2   00          3  3   3   3               1         44               3                     3 3  0                 5       2     0                   0000000000            6    3 0           1    3               1      0              8                9999999999999        3      7      1          6 0            1     11             3333333     1              44        5  5     0 1  1   8888  666     3      1  9999   6           7       7      3    99   6    88          3  22222  1    00     6              3     7              7      0    7         3          6      6 6    00    88  3                 7       3               
lowQualScore                  :                                                                                                                                                                                                                            .    .    .  ..   ....... .    .   .        . ..     .  .  . .  .                   .     .  ...  ... .           .   .        .     .     .         .   .        .   .         .        .                     .  .       .    .        ..  .    .    .            .        .     .       .                  .  . .  ...           .         . .  . .  ...  .      .  ...   .    .. .                  .       .  .     .         .  ............. .   . . ...  .   . ..  .....     .    ..    .   ...    .    .         .     ....  .  ...........  .      . ..   .      .  ...   ...    .   ...   ...   ..   .       ..    ...     .    .          .  .     ....     ..             .      ...  ..    .        .        ...        .   . ..  ..   ..    .    ...         .  ..   .   ................. .   .   ..... .  ........              .  .   .. .    .       .            ...  .  .   ...  .  .   .........   .     ..      ...  ......      . .. .    ...  .   .   ...   .  .     .  .       ........    .....      . ...  .  .  .         .          .          .                      .   .       .                .                    .         .                  .               .            ..           .                 .         .      .  .   .    .      .   ...........  ..        ....    ..   .     ...........................               .           .                         .      .         .       ..   .               ..      .   ..           ...........................                 ..     .      .                            .      ..    .       .  .   .      .    .          . .    .        .                   .       ..      .      .    .  .            .       .             ..  .                      .     .    .....   . .  ..    ..              .     . ...  .  .....             ..    .     .    ..   .  .  ....   .. .  .    .......   ..            .    .......      . .  .... ..    ......     .   .  .  . . .            .   .    .     .    . .  . .  .       .. .    .  . .. .       .        .  .  .   ...   .   ..    .      ..     .  .......      .     .  .    ..       .         ..  .     .     .  . .   .  .      ...     . .   .    . .          .    . .      ........   . . .     .    .    . ..  .    .........        .....       ...     .      ....             .   .      .  .       .   ..          .  .   .   .               .         ..               .                     . .  .                 .       .     .                   ..........            .    . .           .    .               .      .              .                .............        .      .      .          . .            .     ..             .......     .              ..        .  .     . .  .   ....  ...     .      .  ....   .           .       .      .    ..   .    ..          .  .....  .    ..     .              .     .              .      .    .         .          .      . .    ..    ..  .                 .       .               
lowQualScore                  :                                                                                                                                                                                                                            0    8    0  99   0000000 0    1   8        1 99     0  0  8 2  0                   0     0  555  444 6           1   0        7     4     7         7   3        0   0         8        0                     5  2       0    9        99  0    9    5            2        7     7       7                  7  0 7  555           0         5 7  0 0  555  7      7  555   0    77 7                  7       9  7     6         4  0000000000000 0   0 0 000  6   0 88  00000     0    66    0   000    0    8         0     2222  2  22222222222  0      0 00   8      0  000   000    8   000   222   88   0       00    444     8    0          0  0     2222     55             0      000  88    2        0        222        5   2 88  55   88    0    555         7  33   3   00000000000000000 7   7   77777 2  88888888              0  0   22 8    5       0            000  5  0   222  8  0   555555555   0     88      000  888888      2 22 8    555  0   0   555   0  2     0  2       00000000    00000      0 555  8  2  5         2          0          0                      0   0       2                0                    3         3                  3               3            33           3                 7         2      0  5   2    5      5   22222222222  55        2222    55   8     555555555555555555555555555               0           0                         0      2         0       88   5               55      0   55           555555555555555555555555555                 33     7      7                            3      33    7       7  5   0      0    5          2 0    2        0                   7       33      3      7    7  3            0       2             55  5                      0     2    00000   2 8  33    77              0     0 555  8  00000             22    0     2    88   0  2  0000   22 0  5    8888888   88            0    0000000      0 0  5555 55    000000     5   8  0  0 0 6            2   4    0     0    0 0  0 5  0       88 8    0  5 88 0       0        0  5  0   555   0   55    0      88     0  2222222      0     0  0    88       0         88  0     2     0  5 0   8  0      222     2 0   2    0 5          5    0 0      55555555   0 0 0     5    0    5 88  5    555555555        77777       333     0      7777             7   7      0  0       0   77          3  3   3   7               0         33               3                     7 7  7                 0       0     7                   3333333333            7    3 7           0    7               0      0              8                3333333333333        7      0      0          5 0            4     22             2222222     4              00        5  2     7 0  0   7777  555     7      0  2222   7           3       3      3    33   7    33          3  33333  0    77     7              3     0              3      7    3         3          7      7 7    77    33  3                 3       3               
consensus                     :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-T--AGGG--CAC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGC-ACCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGG-TCGCTCAGGAGGCTGCCGGG-TCCACCGCTGCCTCGGTTCAATGAAGGACGACC-----A-CT-TGTCCTGAGCCGCCCGT-GCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGAC-TGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA---CGAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CNCGNCGCGA-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
Reference ( family-425 )      :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-T--AGGG--CAC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCAACCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGTTCGCTCAGGAGGCTGCCGGGCTCCACCGCTGCCTCGGTTCAATGAAGGACGACC-----AGCT-TGTCCTGAGCCGCCCGTGGCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGACTTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA---CGAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CCCGNCGCGA-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
gi|1                          :                                                                                                                                                                                                                        ATAG-GCGGAGTAG-AG--GTC--GGCG-T-GCTGGTCCTGACACTTTTC--CTGCC-CC-TGTCTAC-CAACAAATACCATGTCGATAGTCCCGCGTT-CTT--TCCAGAAACCACACTGG-CTCTCAGGTAGGAGGCCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-TGCGATGATTGTC--GC-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGTG-GCGTCCTTGAAGTCCTGT-GGGA-CT-G-TCTCGTGCTGCTAGATGAGCTGA-AACAGCT-GGTG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCCTTGAAGA-TTTCAGCTGG-GATGGAATCCGAACCAGGT-GA---TTTG--C-CAC-TTGAAAGTAGTCGGG-CT-----GCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGAGCGTCCATGGTCT-C--TTCGAAT--AAGGTTCACATTGGGAGAAAGCCTGTCGATAGCTCATTAATATCGT-GAT-GCGTGTA-AAGTCCTG-TTCAGGAACCGCA--GCCGAAATCTTCTCGCCAATCT-CTTCCAAA----CCTTTCCTTGTCGATGATAAAGGGTTGTA-CC--CATCAGCACTGAG-GAGTGGAGA-GGTGATCCT-AGGTAA-TATTAGG--CCAT-AGAC-T-CCTTCAAGCTGTC-GTAAGAAAG-----CAGAGAGC--CATGTGCGTATACACTGTCTTCCGCAAAGCCTTGAATCTCGTCCGGTTTGCTACTCAACCAGG-AATCCTGCATCT-GGCGCAACTTC--ACTTGA-TGG---T-----GCTACGTACGTTCCTCA-G-TGT-----GTTTTTCTTAGATGCT---GA-CTTTGGG---TCG-TCGAGATG-AGCTTTGTAG--GCAC--GACG-----CTTTTC-CACTAGCAGCTGCTGGATCTCTGTACAGTTCTC-ATCAAACTAG-TCCTTGTGCTTCCTTGTAGCTGGCCCGAGACACTTCATGGCTCTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACACCCTGGCCTTC-CACCACAGTGGAGTCTAAGCGTTGCTCC--AAGATGTTGGC-AAAAGACTGCTTGATGTCGCTGACCTTTAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCACTCCCTGC----GGCC-GTCTCTTGGG---------CTG---------------GATGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCACACATGGTC-TTCGTGA--CTGGTACATCTTGCCTGTTACTCCTCC-TTA-CGATGACGAAGT-------------CAAT----------GCTTTGAGCGGAGATGCA-TCCAT-GACGTCCTGATTCGAGTAGGGAGGTTGAAGACAGT-GTTGGT--GATCAGAAGGTCATGCTCT-GCGCAT-GTTTGGAGTAGTAGTAG-ACCGTTTCTGTTGCAGTTGCCGACTCCATGCTTCCCGATCA-CTCCTTC-CCAGGTGACGTCGT-CACGACCAACTC-TCGCATTAAAATCACAAAGAATAATGAGTTTGTCTGCGTTGGGAACAACGGTGATGACA-----GTGTTCAGG-TCTTTATAAAACTTGTACTTGGTCTCAT---CTGGG-----TTGGTCATGGTGAG-GGCA-ATGGCATTGA--CAATGGCGA----TGTACTTCTGTCCA-TGAGAAAGA--GGGAGTCTCATCGTCAT----TC-GTCATTCACACCCCTTGGGGGA--C-CGTCCAA-CTTGCC-AATC-A-ATGTCGTCTTGACTGCAAAGT-CAACT-CCTGCC-TCTCTTCTCTCTTTGG-GTCCGC-GTCC--AATCCATAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCCTCT-CCTGCCAG--CCTG-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATACCTG--GCGAGTTCACTTGCAATGATTGCTGTGCGTCTCTAAGGTATCT-CTGACTCGTCCCTGTCAAGAAGCGTG-CGAACGTT-----CAGCAAGGGTCAGTGGTGTAATCCTTGTTTTCCTTTTTGAA-----TTTTTTCTTTCA-TTGTTTC--GACCGC--ATGTGTAG-GCCCCCCTCCAGTCGCGGTAAACTGGCTAGAGTAGGTAG--GGCAGGCAATGTT-TGG-GAC-ACCTTTTCTAGTCCGCTCTTCATGCCATGGAGGTGAGCAGGG-CGTTCCTAAAGAGGGCTGCTCAG-TCGCCTAGACGGCTGCCGAAATCTACTGCTGCTCCGGTTCAGTGAATAGCGACC-----A--TATGGCCTGAGCCGCCCGT-GTGCAGGTTTGCGGCTACGACTACCAGTGTACTCACACCTG-TCGCTTCGTCGCTCGCCTGTCGCCACAGGACTATTGGGGATGAAGGGATGGTTTGAAGGATGATAAGATGACTTGCGCGATGACTTTGTTTAAAGTGA--AAAGAGTTGCGCATCTCG--TTGACTTCACTCTCTCGCCCAAAAACCATCTGGGTCCAGCAGCAGGACATGGTCGA-GACGGCTGGAGACGGAGGTGGA-TGCAGTGGATGACCGTGGC-TTCCTA-CGTG-TATCGAAAC--GCTCTCTGTG-CTT--CACGACGCG--TTGCTGGGAATCGCTTTTCT-GCCCGTTGAACCAGGTGCTTTCCTCCGCGCAGTCCACCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAAGATCCAGCA-GCATGCCAGCTGATC
gi|10                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCAG-TCCGTGTGCTTCCTTGTAGCTGTCCCTAGGCACTCCATGGCTGTGTTGTAC-ACAGTGTCACGGAGCGCAGC-CCACGTTGT-CTCAACATCCTGGCCTTC-CAGCATAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTAATTCCCTGT----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTATGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CGAT----------
gi|11                         :                                                                                                                                                                                                                          AG-GTTGTGTAG-AGATATC--G--A-T-GTTGTTCTATGCACTTTTC--CTGTA-GC-TAGCTGG-CGGTGAATATCAGGTCCGTTGTTCCTCGGC-TTG--TGCGGAAGCCATATTGA-C
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         catgctgaagaattttggggctaggacacatccctgtttgaccctgtttgccactgaaaggttttggaaggctctccatcaacaaagactcggaccattatgtcatcatggaactggcggactatagtaatggacctacttggggagtcatacctttccgtcattttccagagtccatcacgactgactgtatcaaatgccttagtcaggtctacaaCTGT-TT--GCAAAGCCCTGAACCTACTTAGCT-GATTGCTCAGCCAGG-AGCTCTGCATCTCA-CGCAG-TTTTTGCTGGA-TAA---T-----ATAACGCATGTTCCTCA-A-TA------GTTTTTGG-GGGTGCTATTGA-CTTCGGT---TCG-TCAATGTG-TGTCTTGTAG--ACCT--GATGGGGTTTTTTTC-CG--AAAAGTTGCTGCATTTTCCCGCAGTTTTC-GTCAAACCTG-TCCTTATGCTTCATGGTAGCAGGTCCTTAGCACTGCTTGGCTGTGTTGTAT-GCCGTTTC
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          catgtcattcAACCACCTGG-TCCAGCG-CAGGACATGGTCGAAGCCGGC-GGA-ACGGAGTTGGGGTGCAGTGGATGACCGTGGCTTTCCTAACGTGTTCTCGACAC--GCTCTCTGCGGCTCGCCTCGCCGCAA-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACGAGGTGGTTTTCTCCGTGCAG-CCGCCGAATCCCAGTCTTCA-ATGCTAGG--GAC--AACCAACTAAAAGCTGAGGATCGAGG-TCCAGCAGGCATACCAGCTGTT
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                            TCTAGCCAA-GATCTTGCTTGCGATGGATAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTTCTTTGCACTTGTAGAG-GTGGATGATGGAG-GTGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCTGG-TG-AAGTTT-CT-C-AATCAGTG-CCACACCTCCCTCCTTGTAGA-TTTCAGC-
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTAAAGTGA-AGAAGAGTTGCACAG--CG--TCGATTTCACTCTCTCGTCC--GAGGCACCT------AGTAGCAGGAC-TA-TC----ATGATTTGCGATGG-GACGGT-TACGGTGGATG-CCTAGAATATTCTA-CGTGC-CTC--AACCTGCTCTTATCA-CT----CCATAGTGAGTTGCT-GTAACTGCCTTTATCGCCCG-TGAAC
gi|17                         :                                                                                                                                                                                                          gacatgcgttgggaccAG-GTTGTGTA--AG--ATC--A-CGAT-GTTGTTCCATGCACTTTTC--CTGTAAGC-TGGCGGGGCGGCAAATAC-ATGTCCGTAGTTTCTC--C-CTG--CGCGGAAGCCACATTGAACTTTCAGGGAGGAGACCCTG-CTCAAGATGCCTCAGCAA-GCGAATT-AAGCAG
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ctacgaTGAATTATGATGTCATGGCTTGTGTG-TCATTTGGATTATAGTGA-GGGAGACTTGCCCG----GAATCAATCCCACTCTCTCGTCC-TGAATCGTC-GGGTCCAGTGGCAGGACAGAGTCGA-GACTGTTGGGGACGAACCAGGA-TGCAG
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         acCGCTGGACCAGGTGGTT-CCTCCGTGCAGTCCGCCGAAT-CCAGTCTTCACATGGCA-GGAAACAAAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTCg
gi|2                          :                                                                                                                                                                                                                     cctgTAGTGTTGAGTAG-AG--GTC--GGCG-T-TCTGCTCCTGACACTTT-C--CTGTA-GCCTGTCTAG-CAGCAAATACCATGTCGAATGTCCCGCGTT-CT---C-CGGAAACCACCATTG-CTCTCAGGTAGGAGGCCTTGGTTCGAGGTG-TTT-ATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTCCCGC-AAACTTGGCGGTTTCCTTTGCG--TGTAGAG-GTGGATGATGGTAAGCGTCCTTGAAGTCCTGT-GGCA-CTAG-TCTCGTGCTGC-AGATGAGCTGA-AATAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCTT---AGAATTTCAG--GG-GATGGAATCCGAACCAGGTGAA---TTTTGCC-TACGT-GAAAGTAGTCGGA-CT-----GCTTT-CTGAGATCTCATCC---AAGGTGGGTGGGGCGTCCATGGTCTTC--TTCGA-C--AGGG--TAC-TTGGGGTA--ACCTGTCGATAGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGGCCATCTCCT-CAAAA----CCTTCCCTTGTCGGTGATAA-GGGTTG-ACCC--CATCAGCACTGAG-GAGGGGAGACAGTGATCCTGAGGTAAGTA--GGG--CCAT-AGACTTTCCTTCAAACTGT-CGTA-GAA-----------GCGCTTCATGT-CGT-T-C-CTGTC-T--GC-AAGCCCTGAATCTCGTCCGCTTTG-CACTCAACCAGG-AATCCTGCATCTGG-CGCAA-TTC--ACT-TA-TAG---TTGTGAGCT-CGTAC-TTCCTCATG-TG------TCTTTCTTTAGATGCT---GATCTTAGTG---TCG-TCGAGATGTAGCTTTGTAGC-GCACGAGACGC----TTTTTCTCACTAGCAGCTGCTGGATCTCTGTGCAGTTCTC-GTCAAACCAG-CCCTTGTGCTTCCTTGTAGCTGTCCCGAGGCACTCCATGGCTGTGTTGTACAACCGTGTCACGGAGCGCAACGCCACGCTGTCCTCAACATCCTGGCCTTCTCAGCACAAAGGAGTC-AGGCGTTGCTCTCAAAGATGTCGGCAAAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATG-TCAGACGTTTT--------TTTTAAATTCATTCCCTGCTGTTGGCCAGCGTTTTGGGCTTTTAATCCTGTGGCTCTTTTGGGATGACGCGAATATTGAGTTTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTCTTTCGTGA--CTCGTATGTCTTGCCTGTC---CCTCC-TTAGCGATGACGTAGTCAATGAAGAGATCCAAT----------GCTTTGAGCGGGGATGCATTCCATGGACGTCCTGTTACGAGTAGGGAGGTTGAAGACGGTGGTTGGTGAGATCAGAAGGTTGTGCTCTGGCGCAA-GTCTGGAGTAGTAGTAGAACTGTTGCTGTTGAAGTTGCCGACTCCATGCTT-CCGATCACCTCCTTCGCCAGGA-ACGCTGCACACGACCAACTC-TCGCGTT-AAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAG-GGTGATGACA-----GTGTTTAGA-TCTC--TAAAACTTGTCCTT-GTCTCAG---CT-GG-----TTGGTCATGGTGGG-GGCATTAGGCACTGA--CAATGGAGA----TGTAATTCTGCCCATTGAGAAAGGGTGGGAGTCTCATCGTCATAAGACG-ATCGTTCACACTC--TTTGGGA--C-C-GGCCAACTTGTC-GACCAATGT-CCGTCTTGACTGC-AAGC-CAACTCCCTGCCTTCTCTCCTCTCTTCGG-GTCCGC-GT-C--AATCCAAAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCTCTC-TCTGCCAGCTCT-G-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATATCTG--GCGAGTTCTTTTGCAATGAGCGCTGTGCGTCTC-GGGGTCTCTCCTGACTCGTCCCTGTCAAGAAGCGTTGCGAACGTTCCAAGCGGCAAGGGTCAGTGGTGTAA-TCCTGTTTTCCTTTT--GAAGTTTTTCTTTC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                       TAAGGCG-GTT-GAGCAGAACTCTAGCCAAAGATCTTGCTTGCGATGGACAGCAATGAGATTC-CGCGATGATTGTC--GC-AAACTTGGCGGTTTCCTTTGCGTTTGTgt
gi|21                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGTTTACCCACACCTG-TCGCTTCGTCGCTCGCCTG
gi|3                          :                                                                                                                                                                                                                          AG-GTTGTGTAGCAG--ATCACGATG-TTGTTGTTCATGGCACTTTTTTTCTGCA-GC-T---TGG-CGGCGA-TATCAGGTCCGTAGTTCCTCGACGCTG--CGCGGAAGCCACATTGA-CTTTCAGGGAGGAAACCCTG-CTCAAGATG-CTCAGCAAG-CG-ATTTAAGCAGA-CACGGGCAAT-GATTTTG-TTGCTATTGACAG-GGAGATATTCTCTCG-TGATTGTC--AC-AGGACTGGCGATTCCCTTTGCGCTTGTAAAT-GTGAACAATCGTG-GTATTC-TGAACTCTTGCGGGTAGTT-GCTCTCG-ATTCCC--ATGACCTCATAAAAACT---TGTCAGTTGACTGCAGAT--GGGTTCGCACCT--GTCTTTGTAG--TCTCAGCAGG-GATGGCGTCGGGGCCGGG--AGCATTTT---CACAC-T-G--CGTCATCTG--CTTGGTGGCTTTGCTGA-CTTTCTTCTTTAGGGGAGGGT----TGTCAA--GT-T-C--TT-GA-TTAACGC--CAC-CTGTGGTA--GGC-GGCAATTGT---TCA---TCATTGAT-C-GTA-GTTAGGGCGA-TTTGATA--CGCTAAATCGAA--GTT-TCGCCCATCT-CT-CAAGGATTTCCTTT--TTGTCTGTTGCAG-GGTTTT-A-CCAAAATC-GCGCTGAGTAAAGGGAG-----GGTCCTGTTG-AC-TGT-GGGTTCCATCAGAC--TGTTTCAGGGCATCCGTA-GAATTTCCTTC---GAG--TCGTGTGCGT-CGGGC-GTATT--------CCTTGGATTTCTTCAGCTTAGGCACT-GAGCAGGCAATCCTGCATGA-G-CG-AG-TTC---CTGGACTGGACTT-----GCTGCGTTTG-----CA-GATGAAAGCAGCTTTTCTT---TACT---GG-CTTGAGGGATTCGTTTTTGGTG-AGGCTCGGAGCAGC-C--GATG-----TTTCTC-CCTCAG-AAATG-TGGATCTTCATGTCGTTCTCAATCAAACAAGCTCCTGGTG
gi|3                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaTTAAGTTTGGCT-ATGTTGAG----CTTAGCGACAGCT-----TTT-TGCCCTGT----GGTT--TCCGCTGGG---------CTG---------------GATAAAGAGGTTCAT-TTTGGAGACGATCAAGACGATGATCCGTCCAGCAGTCCTGCACACAACATGGCC-TTTGTCAGTCTC-TGCGTCCTGCCTGTCCTTGGTCCAGTA---ATGACGTAGT-------------CAATAGGTGCCAGTGCTTTGATTGAGGGTGC-CTCCATGAAGGTT-TGTTTCGAGTTGGCAGCCGGAACATGGT-GTTGGT--GATGGTCAGGTCATG-TTT-GCGCAACATCT-GAGGAGGAGT----CCG-TGCTATTACATTTGCCTACTATATGTTTgtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtttaagtttggctatgttgagcttagcgacagctttttgccctgtggtttccgctgggctggataaagaggttcattttggagacgatcaagacgatgatccgtccagcagtcctgcacacaacatggcctttgtcagtctctgcgtcctgcctgtccttggtccagtaatgacgtagtcaataggtgccagtgctttgattgagggtgcctccatgaaggtttgtttcgagttggcagccggaacatggtgttggtgatggtcaggtcatgtttgcgcaacatctgaggaggagtccgtgctattacatttgcctactatatgtttttttccc
gi|4                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaaggttgtgtagcagatcacgatgttgttgttcatggcactttttttctgcagcttggcggcgatatcaggtccgtagttcctcgacgctgcgcggaagccacattgactttcagggaggaaaccctgctcaagatgctcagcaagcgatttaagcagacacgggcaatgattttgttgctattgacagggagatattctctcgtgattgtcacaggactggcgattccctttgcgcttgtaaatgtgaacaatcgtggtattctgaactcttgcgggtagttgctctcgattcccatgacctcataaaaacttgtcagttgactgcagatgggttcgcacctgtctttgtagtctcagcagggatggcgtcggggccgggagcattttcacactgcgtcatctgcttggtggctttgctgactttcttctttaggggagggttgtcaagttcttgattaacgccacctgtggtaggcggcaattgttcatcattgatcgtagttagggcgatttgatacgctaaatcgaagtttcgcccatctctcaaggatttcctttttgtctgttgcagggttttaccaaaatcgcgctgagtaaagggagggtcctgttgactgtgggttccatcagactgtttcagggcatccgtagaatttccttcgagtcgtgtgcgtcgggcgtattccttggatttcttcagcttaggcactgagcaggcaatcctgcatgagcgagttcctggactggacttgctgcgtttgcagatgaaagcagcttttctttactggcttgagggattcgtttttggtgaggctcggagcagccgatgtttctccctcagaaatgtggatcttcatgtcgttctcaatcaaacaagctcctggtggtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtCAACGCGTGGCATTAAAATCACCACGAA--AT-AGTTTATCAGACTTGGGAATAG--ATGA--ACAAGGGAGTG---AGCCTCCTCGTAAGAACTGTCTTTAGTTTCCTTTCCTCGGAGGTTTTGTTCATGTTGGAAGGCA-TAGAC-CTGGATCAGAGGTGACATTTGTCTTACGGTCCA-C-----AGG--AGGAGCTGCATCTTCATAC-CCT-ATCATTAAGAC----TCAGGAATGC-TTTGCAAGCTTTTCTGGAC-ATGTGTTGTTTTGA-TGCGAAAC-CCACT-CCTGAC-TCGCGTCGCTCTTCGCTGCTTGC-GCCC--ACTCCAAAG-AAGGTGTAACC-GC-TTCCCCATCTCAGTTAATTGGCCTTTTGTCTGCAAG--CG-A-GTTTCAACTAAGAGTCGCAAATCATCGATCTTGTATTTTTTGCCAGTTCCTTTGCTACTAGTGC-GTTCGTCTCTCTGGCCTAT-CTT-TTTGGTGTTGTCAGTAA-CGTT-CTGACGTTTC---CA-TGATGCTAGGTGA-GCAAACCTT----TGCTTTT---A-----TTCTTTCT---AAGTATTTCGAGACCGCCAAAGGG--GTGATCTCCGCCAGCTGCG-TATGCTTAC-AGGGTGG-TAGTAGGCAGGCTAT-TTATAGTGGCAACCTTTCTTAGCCCGTTCCTCAAGCTGTGGAGGCGAGCAGAGTCGATCCAAAAGAGGACTGCTCCGTTCACTCACGAGGCTGCCGGGCTCCATCG-TGCCTTGGTTCAATGAAGGACGACC-----A-CT-TGTCCTGAGCCG-CTGTGGTGCAGGTTCGCGTCTACCGCTCCCAGTGTATCCTCAGCTACTTTCTTCGCCGCTT-CCCATCGCCACAGGAC--TT--GAAT---AGGATGAC-TGGATG-TGATGTATCGACTTGCG-G-TGACTTGGATTATAGTGAGGGGAGACTTGCGCA----GAATCGGCCTCACTCTCTCGT-C-TGAATCGCC-GGGTCCAGTGGCAAGACAGAGTC-C-GACGG-TGGAGA--GAATCAGA-TGCttttccc
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cattccagacatggtagtcggcaCTGTCTTCAGTTTCCT---CAAGG-----TTCGTCCTTGTTGT-AGCA-TATACACTGA--TCAGGGTGACATTTGTCTTGCT-TCCA-------AAG--GGGAGCTTTATCTTCATAA-TCCTATCACTAAGACCT--TCAGGAA--TGCTTGTAAGCTT-CT-GGAC-ATGTGTTGTTTCGATGGAGAAACACAA-T-CCTGAC-TCGTGTCGCTCTTCG----CTGCTGTTCTCACTCCAAAAGAACATGTAACC-GCTACCA--TTCTCAATTAATTGGCCTTTG-TCTGCAAA--GC-GAGTTTCA-CTAAGAGCTGCAA--TATTAATCTTGTATCTG--GCCAGTTCCCTTGCCACTACTTCAGTTCATCTCTCTGGCCTTT-CTGCTTTGGTGTTATCAAGTAACATT-CTAACGTTCC-----ATGATGCTAAGGTGCGCAA-CTTTGTCGTC--------------TTCTTTCT---A-GTATTTCGA--CTGCTAAAAGG--G-GATCCCCGCCAGCTGCAGTATGCTAACCAGGGTGGATTA-AAACAGGCTAT-TT-TAG-GGC-ACCTTTTCTAACCCCGTCCTCATGCTCTGGAGGCGAATAGAG-CGATCCTAAAGAGGACTGTTCGG-TCACTCAGGAGGCTGCCGGG---CACCATTGTCTTGGTCCAATAAAGGACGATCACTTAAGCT-TGTCCTAAACCGCCCAT-GCGTAGGGTCGCAACTACAACTCCCAGTGTATCCTAACCCA-CTGCTTTGCCGCTTCAACATCGCGACAGGGC--TTAGA------AGGATGAC-TGAATGGTGATGTCATGACCTGCGCG-TGACTTGGATTATAGTGA-GTGAAACTTGCGCA----GAATCGACATCACTCTCTCGTCC-TGAATTGCC-GGATCCAGTGACA-----------A-GACAGCTGGAGACGATCAAAGA-TGCAGcagc
gi|6                          :                                                                                                                                                                                                                           g-GTCATGTAG-AG--ATC--GCAG-T-GCTGCTCTTGGTATTTCTC--CTGGA-GT-TGGCGCG-CAGCAAATATCATGTCCGCTGTCCCACGTT-CGG--CGCGGAAGTCGCACTGG-CTTTCTGGGAGGAGTCTTTT-TTCAAGGTG-TTGGATTAGACG-GTT-TAGCAGTACACGAGTCAG-TATCTTCCCAGCTATGGACTGGAGGGAGATGC-CTCTGCGATTATT--GCAAGAC-TGACGGTTTCCTTTCCTCTTGTAGAT-GTCGACAACGCTG-GCATCCTTGAACTGTTGT-GGGA-CT-T-TTTCCTCGTGCCACTTGGGTT----------------AGATTT-CT-G-TATTATGA--CGTGCCTCCTGCCTTGTACA-CTTCTGC-AGTGATAG
gi|7                          : gctgaagagggtcggagccagcatgcagcactgttttacaccgtttgtcactgtgaaggcatctgactcgtctccatcatctagtaccttcaccatcatgccattgtggaaatgtcgaacaaacgtggtaaacttgctggggcagccgaatttttctatgatcttccataagccctccctgctgaccgtgtcaaaggcctttcagatcgacaaatATAG-GTGGAGTAG-AG--GTA--GGCG-T-TCTGCTCCTGACACTT-----CTGTA-GC-TGTCTAG-CAGCAAATACCATGTCGATAGTCCCGCGTT-TTTTTC-CGGAAACCACACTGG-CTCTCAGGTAAGAGGTCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAATTCTATTCAA-GATCTTGCTTGCGATGGACAACAGTGAGATTC-CGCGATGATTGTT--GT-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGAG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGTTGCCAGATGGGCTGA-AACACCTCG-TG-AACTTT-CT-C-GATCAGGG-CCACATCTCCCTCCTTGTAGA-TTTAAACTGG-AATGGAATCCGAA------------------C-CAC-TGGAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGGGCGTCTATGGTCT-C--TTCTA-C--AGGG---AC-TTGGGGTA--GCCTGTCGATGGC--ATCA---TCGTTGAT-G-GTG-G-AAGTTCTG-TTCAGGA--TGCT--TTTAAAATGTT-CCGCCCATCT-CTGCAAAA----CTGTT--TTGTCGGTGATAA-GAGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACAGTAATCCTGAGGTAG-TA--GGA--CCAA-AGAC-TTCCTTCAActttgccacaggagagttgctttacagtctttttgactgcttcttcagtgaggaggttgtccagtttttgct
gi|8                          :                                                                                                                                                                                                                       gacAG-GCTGTGTAG-AT--ATC--A-CGAT-GCAGTTCCATACAGTTTGC--CTGTA-GC-TGACAGG-CGGAAAATATCATGTCCCTTGTTCCTCAAC-CTG--CGCCGAAGCCATATTGG-CTTCCATCGAGGAGACCCTG-CTCAAGATA-CTTCAGCAAGCG-ATT-AAGTAGAACACGGGCAAG-GATTTTGTCTGCTATTGGTAGGAGGGATATCT-CTCGGTGATT-TC--AC-AGGACTAGC--TT---TTTGCGTTTGT-GAGTGTGG
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ctacga-TTTCAGCAGG-GATGGCGTCAGGGCCGGG--AG---TTTCC-C-CAT-T-GA------TC--ATCT-----GGTTT-CT----TCT--TCA---GAGG-G---AGGGTTTTCGAGTTCT-TAGTTTAA-T----GT--CGC-TTACGAAAG-GCCTGT-GGTTGC--TTCA---TCATTAATCG-CTG-C-AGG--ATGATTGAGTA--CGTT--ATCGAAGTGTTttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggttttcagcagggatggcgtcagggccgggagtttccccattgatcatctggtttcttcttcagagggagggttttcgagttcttagtttaatgtcgcttacgaaaggcctgtggttgcttcatcattaatcgctgcaggatgattgagtacgttatcgaagtgtt
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ctacgaaggctgtgtagatatcacgatgcagttccatacagtttgcctgtagctgacaggcggaaaatatcatgtcccttgttcctcaacctgcgccgaagccatattggcttccatcgaggagaccctgctcaagatacttcagcaagcgattaagtagaacacgggcaaggattttgtctgctattggtaggagggatatctctcggtgatttcacaggactagctttttgcgtttgtgagtgtggttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggtGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACTGTTGCTGTTGAAGTTGCCGACTCCATGCTTCCCGATCAC-TCCTTC-CCAGGAGACGCTGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTA
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       C-GACC-A-ATGTCGTCTTGACTGCAAAGC-CAACT-CCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgaccaatgtcgtcttgactgcaaagccaactcc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): GCTGTACTGCTCTCAGCCTTTGGGAGGATCTGACTCGTTTTCATCAAGACCCCCAGTAACCCCCCCCCATTCCACCACTGCATGCCATTGGGGTAACTGGGCTATGCCAGAGCAAGACAAAACTTGCTGATGCAACCAAATCTTCCTTAACCAAAAATCCGCCGAACTTCTAGCCAAGTGACGGCCAATACTTTTCCAATGGTTCACTTGTTGACCTCGGTCCGAAGGCCTTTGCCACAAATCGACAAAGGTCATAAGTAGCAGGTCACAGTG






Alignments
lowQualScore                  :                                                                                                                                                                                                                                              1111111                                                                                                                                                                                                                                                                                                                              222                                                     2                     5555555555555       1            11  22222                    111                         1111     22222222222           11             111   111        111   111                11    111          1          1  2     2222     11             1      111  11             1        111              11  22   11    1    111            11   1   99999999999999999         33333    22222222                        1            1            222     1   222     1   333333333                 111  333333        11      111  1       111   1        1          22222222    33333      1 111                             1                                                              1                    1         1                  1                            11           1                                  1                      33333333333            2222    11         777777777777777777777777777               1           1                         1                1       11                           1   11           666666666666666666666666666                 11                                         1      11                   1      1                 1                                         11      1              1            1                                                1          22222        11    11                      111  1  22222             11    1          11         2222              4444444   11                 2222222           2222       222222                   1                                  1               11      1    11         1           1  1             11           11        2222222      1             11                 11                                           1                          1        33333333             1    2               444444444        22222       111     1      2222                           1       1   22          1  1   1    1                                         1                        1                 22222      1                          333333                   1                                         1                               3333333333333       1                           1                  11             4444444                    11        1                       111                                                 1    11        11          1   11         2                    1                                          1                        22    11  1                         1               
lowQualScore                  :                                                                                                                                                                                                                            5    0    5  66   5555555 5    1   0        3 66     5  5  2 0  5                   1     1  666  999 5           1   5        0     0     5         5   5        5   5         0        5                     2  0       5    0        66  5    0    2            0        5     0       6                  6  1 6  777           1         2 6  1 1  222  6      6  777   1    77 0                  5       2  6     0         1  8888888888888 8   8 6 777  0   5 11  00000     8    88    1   444    6    3         6     2222  3  44444444444  8      1 99   0      1  777   444    0   111   444   88   8       11    222     3    5          0  0     1111     77             0      111  33    3        0        666        2   3 00  55   33    0    666         0  33   3   88888888888888888 0   6   11111 3  44444444              1  1   44 0    2       0            444  2  0   444  8  0   333333333   7     55      444  888888      0 00 0    777  0   1   777   0  0     0  0       66666666    55555      0 111  8  0  2         0          0          8                      1   1       0                0                    3         3                  3               7            88           3                 0         0      0  2   3    6      6   11111111111  33        1111    22   0     333333333333333333333333333               0           0                         0      0         0       33   2               99      0   22           555555555555555555555555555                 99     6      6                            3      88    0       0  2   0      0    2          3 0    3        1                   6       33      3      6    0  3            0       3             33  2                      5     3    55555   3 0  44    55              7     1 777  0  55555             00    0     3    33   1  4  4444   22 1  2    0000000   33            1    5555555      1 1  0000 44    111111     6   8  8  1 8 0            3   6    8     8    1 0  1 2  1       88 0    0  6 33 1       0        1  5  0   444   1   88    1      00     1  4444444      0     1  1    33       1         33  1     0     1  2 1   9  1      555     0 0   9    1 2          6    0 1      33333333   1 1 1     0    0    2 33  2    888888888        77777       222     2      1111             0   6      1  2       2   00          3  3   3    3              1         44               3                     3  3 0               44444      2     0                    888888              6    3 0           1    3               1      0              8                9999999999999       0       7      1          6 0            1     11             3333333     1              44        5  5     0 1  1   8888  666     3      1  9999   6           7       7      3    99   6    88          3   88 1  1    3     6              3     7              7      0    7         3          6      6 6    00    88  3                 7       3               
lowQualScore                  :                                                                                                                                                                                                                            .    .    .  ..   ....... .    .   .        . ..     .  .  . .  .                   .     .  ...  ... .           .   .        .     .     .         .   .        .   .         .        .                     .  .       .    .        ..  .    .    .            .        .     .       .                  .  . .  ...           .         . .  . .  ...  .      .  ...   .    .. .                  .       .  .     .         .  ............. .   . . ...  .   . ..  .....     .    ..    .   ...    .    .         .     ....  .  ...........  .      . ..   .      .  ...   ...    .   ...   ...   ..   .       ..    ...     .    .          .  .     ....     ..             .      ...  ..    .        .        ...        .   . ..  ..   ..    .    ...         .  ..   .   ................. .   .   ..... .  ........              .  .   .. .    .       .            ...  .  .   ...  .  .   .........   .     ..      ...  ......      . .. .    ...  .   .   ...   .  .     .  .       ........    .....      . ...  .  .  .         .          .          .                      .   .       .                .                    .         .                  .               .            ..           .                 .         .      .  .   .    .      .   ...........  ..        ....    ..   .     ...........................               .           .                         .      .         .       ..   .               ..      .   ..           ...........................                 ..     .      .                            .      ..    .       .  .   .      .    .          . .    .        .                   .       ..      .      .    .  .            .       .             ..  .                      .     .    .....   . .  ..    ..              .     . ...  .  .....             ..    .     .    ..   .  .  ....   .. .  .    .......   ..            .    .......      . .  .... ..    ......     .   .  .  . . .            .   .    .     .    . .  . .  .       .. .    .  . .. .       .        .  .  .   ...   .   ..    .      ..     .  .......      .     .  .    ..       .         ..  .     .     .  . .   .  .      ...     . .   .    . .          .    . .      ........   . . .     .    .    . ..  .    .........        .....       ...     .      ....             .   .      .  .       .   ..          .  .   .    .              .         ..               .                     .  . .               .....      .     .                    ......              .    . .           .    .               .      .              .                .............       .       .      .          . .            .     ..             .......     .              ..        .  .     . .  .   ....  ...     .      .  ....   .           .       .      .    ..   .    ..          .   .. .  .    .     .              .     .              .      .    .         .          .      . .    ..    ..  .                 .       .               
lowQualScore                  :                                                                                                                                                                                                                            0    8    0  99   0000000 0    1   8        1 99     0  0  8 2  0                   0     0  555  444 6           1   0        7     4     7         7   3        0   0         8        0                     5  2       0    9        99  0    9    5            2        7     7       7                  7  0 7  555           0         5 7  0 0  555  7      7  555   0    77 7                  7       9  7     6         4  0000000000000 0   0 0 000  6   0 88  00000     0    66    0   000    0    8         0     2222  2  22222222222  0      0 00   8      0  000   000    8   000   222   88   0       00    444     8    0          0  0     2222     55             0      000  88    2        0        222        5   2 88  55   88    0    555         7  33   3   00000000000000000 7   7   77777 2  88888888              0  0   22 8    5       0            000  5  0   222  8  0   555555555   0     88      000  888888      2 22 8    555  0   0   555   0  2     0  2       00000000    00000      0 555  8  2  5         2          0          0                      0   0       2                0                    3         3                  3               3            33           3                 7         2      0  5   2    5      5   22222222222  55        2222    55   8     555555555555555555555555555               0           0                         0      2         0       88   5               55      0   55           555555555555555555555555555                 33     7      7                            3      33    7       7  5   0      0    5          2 0    2        0                   7       33      3      7    7  3            0       2             55  5                      0     2    00000   2 8  33    77              0     0 555  8  00000             22    0     2    88   0  2  0000   22 0  5    8888888   88            0    0000000      0 0  5555 55    000000     5   8  0  0 0 6            2   4    0     0    0 0  0 5  0       88 8    0  5 88 0       0        0  5  0   555   0   55    0      88     0  2222222      0     0  0    88       0         88  0     2     0  5 0   8  0      222     2 0   2    0 5          5    0 0      55555555   0 0 0     5    0    5 88  5    555555555        77777       333     0      7777             7   7      0  0       0   77          3  3   3    3              0         33               3                     7  3 7               77777      0     7                    333333              7    3 7           0    7               0      0              8                3333333333333       0       0      0          5 0            4     22             2222222     4              00        5  2     7 0  0   7777  555     7      0  2222   7           3       3      3    33   7    33          3   33 0  0    7     7              3     0              3      7    3         3          7      7 7    77    33  3                 3       3               
consensus                     :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-T--AGGG--CAC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCA-CCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGT-CGCTCAGGAGGCTGCCG-GG-TCCACCGCTGCCTCGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCGCCCGT-GCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGA-CTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA---CGAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CACGNCGCG-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
Reference ( family-425 )      :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-T--AGGG--CAC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCA-CCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGT-CGCTCAGGAGGCTGCCG-GG-TCCACCGCTGCCTCGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCGCCCGT-GCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGA-CTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA---CGAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CNCGNCGCGATTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
gi|1                          :                                                                                                                                                                                                                        ATAG-GCGGAGTAG-AG--GTC--GGCG-T-GCTGGTCCTGACACTTTTC--CTGCC-CC-TGTCTAC-CAACAAATACCATGTCGATAGTCCCGCGTT-CTT--TCCAGAAACCACACTGG-CTCTCAGGTAGGAGGCCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-TGCGATGATTGTC--GC-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGTG-GCGTCCTTGAAGTCCTGT-GGGA-CT-G-TCTCGTGCTGCTAGATGAGCTGA-AACAGCT-GGTG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCCTTGAAGA-TTTCAGCTGG-GATGGAATCCGAACCAGGT-GA---TTTG--C-CAC-TTGAAAGTAGTCGGG-CT-----GCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGAGCGTCCATGGTCT-C--TTCGAAT--AAGGTTCACATTGGGAGAAAGCCTGTCGATAGCTCATTAATATCGT-GAT-GCGTGTA-AAGTCCTG-TTCAGGAACCGCA--GCCGAAATCTTCTCGCCAATCT-CTTCCAAA----CCTTTCCTTGTCGATGATAAAGGGTTGTA-CC--CATCAGCACTGAG-GAGTGGAGA-GGTGATCCT-AGGTAA-TATTAGG--CCAT-AGAC-T-CCTTCAAGCTGTC-GTAAGAAAG-----CAGAGAGC--CATGTGCGTATACACTGTCTTCCGCAAAGCCTTGAATCTCGTCCGGTTTGCTACTCAACCAGG-AATCCTGCATCT-GGCGCAACTTC--ACTTGA-TGG---T-----GCTACGTACGTTCCTCA-G-TGT-----GTTTTTCTTAGATGCT---GA-CTTTGGG---TCG-TCGAGATG-AGCTTTGTAG--GCAC--GACG-----CTTTTC-CACTAGCAGCTGCTGGATCTCTGTACAGTTCTC-ATCAAACTAG-TCCTTGTGCTTCCTTGTAGCTGGCCCGAGACACTTCATGGCTCTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACACCCTGGCCTTC-CACCACAGTGGAGTCTAAGCGTTGCTCC--AAGATGTTGGC-AAAAGACTGCTTGATGTCGCTGACCTTTAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCACTCCCTGC----GGCC-GTCTCTTGGG---------CTG---------------GATGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCACACATGGTC-TTCGTGA--CTGGTACATCTTGCCTGTTACTCCTCC-TTA-CGATGACGAAGT-------------CAAT----------GCTTTGAGCGGAGATGCA-TCCAT-GACGTCCTGATTCGAGTAGGGAGGTTGAAGACAGT-GTTGGT--GATCAGAAGGTCATGCTCT-GCGCAT-GTTTGGAGTAGTAGTAG-ACCGTTTCTGTTGCAGTTGCCGACTCCATGCTTCCCGATCA-CTCCTTC-CCAGGTGACGTCGT-CACGACCAACTC-TCGCATTAAAATCACAAAGAATAATGAGTTTGTCTGCGTTGGGAACAACGGTGATGACA-----GTGTTCAGG-TCTTTATAAAACTTGTACTTGGTCTCAT---CTGGG-----TTGGTCATGGTGAG-GGCA-ATGGCATTGA--CAATGGCGA----TGTACTTCTGTCCA-TGAGAAAGA--GGGAGTCTCATCGTCAT----TC-GTCATTCACACCCCTTGGGGGA--C-CGTCCAA-CTTGCC-AATC-A-ATGTCGTCTTGACTGCAAAGT-CAACT-CCTGCC-TCTCTTCTCTCTTTGG-GTCCGC-GTCC--AATCCATAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCCTCT-CCTGCCAG--CCTG-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATACCTG--GCGAGTTCACTTGCAATGATTGCTGTGCGTCTCTAAGGTATCT-CTGACTCGTCCCTGTCAAGAAGCGTG-CGAACGTT-----CAGCAAGGGTCAGTGGTGTAATCCTTGTTTTCCTTTTTGAA-----TTTTTTCTTTCA-TTGTTTC--GACCGC--ATGTGTAG-GCCCCCCTCCAGTCGCGGTAAACTGGCTAGAGTAGGTAG--GGCAGGCAATGTT-TGG-GACA-CCTTTTCTAGTCCGCTCTTCATGCCATGGAGGTGAGCAGGG-CGTTCCTAAAGAGGGCTGCTCAGT-CGCCTAGACGGCTGCCGAAA-TCTACTGCTGCTCCGGTTCAGTGAATAGCGACCA------TATGGCCTGAGCCGCCCGT-GTGCAGGTTTGCGGCTACGACTACCAGTGTACTCACACCTG-TCGCTTCGTCGCTCGCCTGTCGCCACAGGACTATTGGGGATGAAGGGATGGTTTGAAGGATGATAAGATGACTTGCGCGATGACTTTGTTTAAAGTGA--AAAGAGTTGCGCATCTCG--TTGACTTCACTCTCTCGCCCAAAAACCATCTGGGTCCAGCAGCAGGACATGGTCGA-GACGGCTGGAGACGGAGGTGGA-TGCAGTGGATGACCGTGGC-TTCCTA-CGTG-TATCGAAAC--GCTCTCTGTG-CTT--CACGACGCG-TTGCTGGGAATCGCTTTTCT-GCCCGTTGAACCAGGTGCTTTCCTCCGCGCAGTCCACCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAAGATCCAGCA-GCATGCCAGCTGATC
gi|10                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCAG-TCCGTGTGCTTCCTTGTAGCTGTCCCTAGGCACTCCATGGCTGTGTTGTAC-ACAGTGTCACGGAGCGCAGC-CCACGTTGT-CTCAACATCCTGGCCTTC-CAGCATAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTAATTCCCTGT----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTATGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CGAT----------
gi|11                         :                                                                                                                                                                                                                          AG-GTTGTGTAG-AGATATC--G--A-T-GTTGTTCTATGCACTTTTC--CTGTA-GC-TAGCTGG-CGGTGAATATCAGGTCCGTTGTTCCTCGGC-TTG--TGCGGAAGCCATATTGA-C
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         catgctgaagaattttggggctaggacacatccctgtttgaccctgtttgccactgaaaggttttggaaggctctccatcaacaaagactcggaccattatgtcatcatggaactggcggactatagtaatggacctacttggggagtcatacctttccgtcattttccagagtccatcacgactgactgtatcaaatgccttagtcaggtctacaaCTGT-TT--GCAAAGCCCTGAACCTACTTAGCT-GATTGCTCAGCCAGG-AGCTCTGCATCTCA-CGCAG-TTTTTGCTGGA-TAA---T-----ATAACGCATGTTCCTCA-A-TA------GTTTTTGG-GGGTGCTATTGA-CTTCGGT---TCG-TCAATGTG-TGTCTTGTAG--ACCT--GATGGGGTTTTTTTC-CG--AAAAGTTGCTGCATTTTCCCGCAGTTTTC-GTCAAACCTG-TCCTTATGCTTCATGGTAGCAGGTCCTTAGCACTGCTTGGCTGTGTTGTAT-GCCGTTTC
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          catgtcattcAACCACCTGG-TCCAGCG-CAGGACATGGTCGAAGCCGGC-GGA-ACGGAGTTGGGGTGCAGTGGATGACCGTGGCTTTCCTAACGTGTTCTCGACAC--GCTCTCTGCGGCTCGCCTCGCCGCAATTGCTGGGAATCGCCTTTCT-GCCCGTTGAACGAGGTGGTTTTCTCCGTGCAG-CCGCCGAATCCCAGTCTTCA-ATGCTAGG--GAC--AACCAACTAAAAGCTGAGGATCGAGG-TCCAGCAGGCATACCAGCTGTT
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                            TCTAGCCAA-GATCTTGCTTGCGATGGATAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTTCTTTGCACTTGTAGAG-GTGGATGATGGAG-GTGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCTGG-TG-AAGTTT-CT-C-AATCAGTG-CCACACCTCCCTCCTTGTAGA-TTTCAGC-
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTAAAGTGA-AGAAGAGTTGCACAG--CG--TCGATTTCACTCTCTCGTCC--GAGGCACCT------AGTAGCAGGAC-TA-TC----ATGATTTGCGATGG-GACGGT-TACGGTGGATG-CCTAGAATATTCTA-CGTGC-CTC--AACCTGCTCTTATCA-CTC--CATAGTGAG-TTGCT-GTAACTGCCTTTATCGCCCG-TGAAC
gi|17                         :                                                                                                                                                                                                          gacatgcgttgggaccAG-GTTGTGTA--AG--ATC--A-CGAT-GTTGTTCCATGCACTTTTC--CTGTAAGC-TGGCGGGGCGGCAAATAC-ATGTCCGTAGTTTCTC--C-CTG--CGCGGAAGCCACATTGAACTTTCAGGGAGGAGACCCTG-CTCAAGATGCCTCAGCAA-GCGAATT-AAGCAG
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ctacgaA-CTGAATTATGATGTCATGGCTTGTGTG-TCATTTGGATTATAGTGA-GGGAGACTTGCCCG----GAATCAATCCCACTCTCTCGTCC-TGAATCGTC-GGGTCCAGTGGCAGGACAGAGTCGA-GACTGTTGGGGACGAACCAGGA-TGCAG
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCTGGACCAGGTGGTT-CCTCCGTGCAGTCCGCCGAAT-CCAGTCTTCACATGGCA-GGAAACAAAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTCg
gi|2                          :                                                                                                                                                                                                                     cctgTAGTGTTGAGTAG-AG--GTC--GGCG-T-TCTGCTCCTGACACTTT-C--CTGTA-GCCTGTCTAG-CAGCAAATACCATGTCGAATGTCCCGCGTT-CT---C-CGGAAACCACCATTG-CTCTCAGGTAGGAGGCCTTGGTTCGAGGTG-TTT-ATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTCCCGC-AAACTTGGCGGTTTCCTTTGCG--TGTAGAG-GTGGATGATGGTAAGCGTCCTTGAAGTCCTGT-GGCA-CTAG-TCTCGTGCTGC-AGATGAGCTGA-AATAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCTT---AGAATTTCAG--GG-GATGGAATCCGAACCAGGTGAA---TTTTGCC-TACGT-GAAAGTAGTCGGA-CT-----GCTTT-CTGAGATCTCATCC---AAGGTGGGTGGGGCGTCCATGGTCTTC--TTCGA-C--AGGG--TAC-TTGGGGTA--ACCTGTCGATAGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGGCCATCTCCT-CAAAA----CCTTCCCTTGTCGGTGATAA-GGGTTG-ACCC--CATCAGCACTGAG-GAGGGGAGACAGTGATCCTGAGGTAAGTA--GGG--CCAT-AGACTTTCCTTCAAACTGT-CGTA-GAA-----------GCGCTTCATGT-CGT-T-C-CTGTC-T--GC-AAGCCCTGAATCTCGTCCGCTTTG-CACTCAACCAGG-AATCCTGCATCTGG-CGCAA-TTC--ACT-TA-TAG---TTGTGAGCT-CGTAC-TTCCTCATG-TG------TCTTTCTTTAGATGCT---GATCTTAGTG---TCG-TCGAGATGTAGCTTTGTAGC-GCACGAGACGC----TTTTTCTCACTAGCAGCTGCTGGATCTCTGTGCAGTTCTC-GTCAAACCAG-CCCTTGTGCTTCCTTGTAGCTGTCCCGAGGCACTCCATGGCTGTGTTGTACAACCGTGTCACGGAGCGCAACGCCACGCTGTCCTCAACATCCTGGCCTTCTCAGCACAAAGGAGTC-AGGCGTTGCTCTCAAAGATGTCGGCAAAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATG-TCAGACGTTTT--------TTTTAAATTCATTCCCTGCTGTTGGCCAGCGTTTTGGGCTTTTAATCCTGTGGCTCTTTTGGGATGACGCGAATATTGAGTTTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTCTTTCGTGA--CTCGTATGTCTTGCCTGTC---CCTCC-TTAGCGATGACGTAGTCAATGAAGAGATCCAAT----------GCTTTGAGCGGGGATGCATTCCATGGACGTCCTGTTACGAGTAGGGAGGTTGAAGACGGTGGTTGGTGAGATCAGAAGGTTGTGCTCTGGCGCAA-GTCTGGAGTAGTAGTAGAACTGTTGCTGTTGAAGTTGCCGACTCCATGCTT-CCGATCACCTCCTTCGCCAGGA-ACGCTGCACACGACCAACTC-TCGCGTT-AAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAG-GGTGATGACA-----GTGTTTAGA-TCTC--TAAAACTTGTCCTT-GTCTCAG---CT-GG-----TTGGTCATGGTGGG-GGCATTAGGCACTGA--CAATGGAGA----TGTAATTCTGCCCATTGAGAAAGGGTGGGAGTCTCATCGTCATAAGACG-ATCGTTCACACTC--TTTGGGA--C-C-GGCCAACTTGTC-GACCAATGT-CCGTCTTGACTGC-AAGC-CAACTCCCTGCCTTCTCTCCTCTCTTCGG-GTCCGC-GT-C--AATCCAAAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCTCTC-TCTGCCAGCTCT-G-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATATCTG--GCGAGTTCTTTTGCAATGAGCGCTGTGCGTCTC-GGGGTCTCTCCTGACTCGTCCCTGTCAAGAAGCGTTGCGAACGTTCCAAGCGGCAAGGGTCAGTGGTGTAA-TCCTGTTTTCCTTTT--GAAGTTTTTCTTTC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                       TAAGGCG-GTT-GAGCAGAACTCTAGCCAAAGATCTTGCTTGCGATGGACAGCAATGAGATTC-CGCGATGATTGTC--GC-AAACTTGGCGGTTTCCTTTGCGTTTGTgt
gi|21                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGTTTACCCACACCTG-TCGCTTCGTCGCTCGCCTG
gi|3                          :                                                                                                                                                                                                                          AG-GTTGTGTAGCAG--ATCACGATG-TTGTTGTTCATGGCACTTTTTTTCTGCA-GC-T---TGG-CGGCGA-TATCAGGTCCGTAGTTCCTCGACGCTG--CGCGGAAGCCACATTGA-CTTTCAGGGAGGAAACCCTG-CTCAAGATG-CTCAGCAAG-CG-ATTTAAGCAGA-CACGGGCAAT-GATTTTG-TTGCTATTGACAG-GGAGATATTCTCTCG-TGATTGTC--AC-AGGACTGGCGATTCCCTTTGCGCTTGTAAAT-GTGAACAATCGTG-GTATTC-TGAACTCTTGCGGGTAGTT-GCTCTCG-ATTCCC--ATGACCTCATAAAAACT---TGTCAGTTGACTGCAGAT--GGGTTCGCACCT--GTCTTTGTAG--TCTCAGCAGG-GATGGCGTCGGGGCCGGG--AGCATTTT---CACAC-T-G--CGTCATCTG--CTTGGTGGCTTTGCTGA-CTTTCTTCTTTAGGGGAGGGT----TGTCAA--GT-T-C--TT-GA-TTAACGC--CAC-CTGTGGTA--GGC-GGCAATTGT---TCA---TCATTGAT-C-GTA-GTTAGGGCGA-TTTGATA--CGCTAAATCGAA--GTT-TCGCCCATCT-CT-CAAGGATTTCCTTT--TTGTCTGTTGCAG-GGTTTT-A-CCAAAATC-GCGCTGAGTAAAGGGAG-----GGTCCTGTTG-AC-TGT-GGGTTCCATCAGAC--TGTTTCAGGGCATCCGTA-GAATTTCCTTC---GAG--TCGTGTGCGT-CGGGC-GTATT--------CCTTGGATTTCTTCAGCTTAGGCACT-GAGCAGGCAATCCTGCATGA-G-CG-AG-TTC---CTGGACTGGACTT-----GCTGCGTTTG-----CA-GATGAAAGCAGCTTTTCTT---TACT---GG-CTTGAGGGATTCGTTTTTGGTG-AGGCTCGGAGCAGC-C--GATG-----TTTCTC-CCTCAG-AAATG-TGGATCTTCATGTCGTTCTCAATCAAACAAGCTCCTGGTG
gi|3                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaTTAAGTTTGGCT-ATGTTGAG----CTTAGCGACAGCT-----TTT-TGCCCTGT----GGTT--TCCGCTGGG---------CTG---------------GATAAAGAGGTTCAT-TTTGGAGACGATCAAGACGATGATCCGTCCAGCAGTCCTGCACACAACATGGCC-TTTGTCAGTCTC-TGCGTCCTGCCTGTCCTTGGTCCAGTA---ATGACGTAGT-------------CAATAGGTGCCAGTGCTTTGATTGAGGGTGC-CTCCATGAAGGTT-TGTTTCGAGTTGGCAGCCGGAACATGGT-GTTGGT--GATGGTCAGGTCATG-TTT-GCGCAACATCT-GAGGAGGAGT----CCG-TGCTATTACATTTGCCTACTATATGTTTgtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtttaagtttggctatgttgagcttagcgacagctttttgccctgtggtttccgctgggctggataaagaggttcattttggagacgatcaagacgatgatccgtccagcagtcctgcacacaacatggcctttgtcagtctctgcgtcctgcctgtccttggtccagtaatgacgtagtcaataggtgccagtgctttgattgagggtgcctccatgaaggtttgtttcgagttggcagccggaacatggtgttggtgatggtcaggtcatgtttgcgcaacatctgaggaggagtccgtgctattacatttgcctactatatgtttttttccc
gi|4                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaaggttgtgtagcagatcacgatgttgttgttcatggcactttttttctgcagcttggcggcgatatcaggtccgtagttcctcgacgctgcgcggaagccacattgactttcagggaggaaaccctgctcaagatgctcagcaagcgatttaagcagacacgggcaatgattttgttgctattgacagggagatattctctcgtgattgtcacaggactggcgattccctttgcgcttgtaaatgtgaacaatcgtggtattctgaactcttgcgggtagttgctctcgattcccatgacctcataaaaacttgtcagttgactgcagatgggttcgcacctgtctttgtagtctcagcagggatggcgtcggggccgggagcattttcacactgcgtcatctgcttggtggctttgctgactttcttctttaggggagggttgtcaagttcttgattaacgccacctgtggtaggcggcaattgttcatcattgatcgtagttagggcgatttgatacgctaaatcgaagtttcgcccatctctcaaggatttcctttttgtctgttgcagggttttaccaaaatcgcgctgagtaaagggagggtcctgttgactgtgggttccatcagactgtttcagggcatccgtagaatttccttcgagtcgtgtgcgtcgggcgtattccttggatttcttcagcttaggcactgagcaggcaatcctgcatgagcgagttcctggactggacttgctgcgtttgcagatgaaagcagcttttctttactggcttgagggattcgtttttggtgaggctcggagcagccgatgtttctccctcagaaatgtggatcttcatgtcgttctcaatcaaacaagctcctggtggtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtCAACGCGTGGCATTAAAATCACCACGAA--AT-AGTTTATCAGACTTGGGAATAG--ATGA--ACAAGGGAGTG---AGCCTCCTCGTAAGAACTGTCTTTAGTTTCCTTTCCTCGGAGGTTTTGTTCATGTTGGAAGGCA-TAGAC-CTGGATCAGAGGTGACATTTGTCTTACGGTCCA-C-----AGG--AGGAGCTGCATCTTCATAC-CCT-ATCATTAAGAC----TCAGGAATGC-TTTGCAAGCTTTTCTGGAC-ATGTGTTGTTTTGA-TGCGAAAC-CCACT-CCTGAC-TCGCGTCGCTCTTCGCTGCTTGC-GCCC--ACTCCAAAG-AAGGTGTAACC-GC-TTCCCCATCTCAGTTAATTGGCCTTTTGTCTGCAAG--CG-A-GTTTCAACTAAGAGTCGCAAATCATCGATCTTGTATTTTTTGCCAGTTCCTTTGCTACTAGTGC-GTTCGTCTCTCTGGCCTAT-CTT-TTTGGTGTTGTCAGTAA-CGTT-CTGACGTTTC---CA-TGATGCTAGGTGA-GCAAACCTT----TGCTTTT---A-----TTCTTTCT---AAGTATTTCGAGACCGCCAAAGGG--GTGATCTCCGCCAGCTGCG-TATGCTTAC-AGGGTGG-TAGTAGGCAGGCTAT-TTATAGTGGCAACCTTTCTTAGCCCGTTCCTCAAGCTGTGGAGGCGAGCAGAGTCGATCCAAAAGAGGACTGCTCCGTTCACTCACGAGGCTGCCG-GGCTCCATCG-TGCCTTGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCG-CTGTGGTGCAGGTTCGCGTCTACCGCTCCCAGTGTATCCTCAGCTACTTTCTTCGCCGCTT-CCCATCGCCACAGGAC--TT--GAAT---AGGATGA-CTGGATG-TGATGTATCGACTTGCG-G-TGACTTGGATTATAGTGAGGGGAGACTTGCGCA----GAATCGGCCTCACTCTCTCGT-C-TGAATCGCC-GGGTCCAGTGGCAAGACAGAGTC-C-GACGG-TGGAGA--GAATCAGA-TGCttttccc
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cattccagacatggtagtcggcaCTGTCTTCAGTTTCCT---CAAGG-----TTCGTCCTTGTTGT-AGCA-TATACACTGA--TCAGGGTGACATTTGTCTTGCT-TCCA-------AAG--GGGAGCTTTATCTTCATAA-TCCTATCACTAAGACCT--TCAGGAA--TGCTTGTAAGCTT-CT-GGAC-ATGTGTTGTTTCGATGGAGAAACACAA-T-CCTGAC-TCGTGTCGCTCTTCG----CTGCTGTTCTCACTCCAAAAGAACATGTAACC-GCTACCA--TTCTCAATTAATTGGCCTTTG-TCTGCAAA--GC-GAGTTTCA-CTAAGAGCTGCAA--TATTAATCTTGTATCTG--GCCAGTTCCCTTGCCACTACTTCAGTTCATCTCTCTGGCCTTT-CTGCTTTGGTGTTATCAAGTAACATT-CTAACGTTCC-----ATGATGCTAAGGTGCGCAA-CTTTGTCGTC--------------TTCTTTCT---A-GTATTTCGA--CTGCTAAAAGG--G-GATCCCCGCCAGCTGCAGTATGCTAACCAGGGTGGATTA-AAACAGGCTAT-TT-TAG-GGCA-CCTTTTCTAACCCCGTCCTCATGCTCTGGAGGCGAATAGAG-CGATCCTAAAGAGGACTGTTCGGT-CACTCAGGAGGCTGCCG-GG---CACCATTGTCTTGGTCCAATAAAGGACGATCACTTAAGCTTGTCCTAAACCGCCCAT-GCGTAGGGTCGCAACTACAACTCCCAGTGTATCCTAACCCA-CTGCTTTGCCGCTTCAACATCGCGACAGGGC--TTAGA------AGGATGA-CTGAATGGTGATGTCATGACCTGCGCG-TGACTTGGATTATAGTGA-GTGAAACTTGCGCA----GAATCGACATCACTCTCTCGTCC-TGAATTGCC-GGATCCAGTGACA-----------A-GACAGCTGGAGACGATCAAAGA-TGCAGcagc
gi|6                          :                                                                                                                                                                                                                           g-GTCATGTAG-AG--ATC--GCAG-T-GCTGCTCTTGGTATTTCTC--CTGGA-GT-TGGCGCG-CAGCAAATATCATGTCCGCTGTCCCACGTT-CGG--CGCGGAAGTCGCACTGG-CTTTCTGGGAGGAGTCTTTT-TTCAAGGTG-TTGGATTAGACG-GTT-TAGCAGTACACGAGTCAG-TATCTTCCCAGCTATGGACTGGAGGGAGATGC-CTCTGCGATTATT--GCAAGAC-TGACGGTTTCCTTTCCTCTTGTAGAT-GTCGACAACGCTG-GCATCCTTGAACTGTTGT-GGGA-CT-T-TTTCCTCGTGCCACTTGGGTT----------------AGATTT-CT-G-TATTATGA--CGTGCCTCCTGCCTTGTACA-CTTCTGC-AGTGATAG
gi|7                          : gctgaagagggtcggagccagcatgcagcactgttttacaccgtttgtcactgtgaaggcatctgactcgtctccatcatctagtaccttcaccatcatgccattgtggaaatgtcgaacaaacgtggtaaacttgctggggcagccgaatttttctatgatcttccataagccctccctgctgaccgtgtcaaaggcctttcagatcgacaaatATAG-GTGGAGTAG-AG--GTA--GGCG-T-TCTGCTCCTGACACTT-----CTGTA-GC-TGTCTAG-CAGCAAATACCATGTCGATAGTCCCGCGTT-TTTTTC-CGGAAACCACACTGG-CTCTCAGGTAAGAGGTCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAATTCTATTCAA-GATCTTGCTTGCGATGGACAACAGTGAGATTC-CGCGATGATTGTT--GT-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGAG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGTTGCCAGATGGGCTGA-AACACCTCG-TG-AACTTT-CT-C-GATCAGGG-CCACATCTCCCTCCTTGTAGA-TTTAAACTGG-AATGGAATCCGAA------------------C-CAC-TGGAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGGGCGTCTATGGTCT-C--TTCTA-C--AGGG---AC-TTGGGGTA--GCCTGTCGATGGC--ATCA---TCGTTGAT-G-GTG-G-AAGTTCTG-TTCAGGA--TGCT--TTTAAAATGTT-CCGCCCATCT-CTGCAAAA----CTGTT--TTGTCGGTGATAA-GAGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACAGTAATCCTGAGGTAG-TA--GGA--CCAA-AGAC-TTCCTTCAActttgccacaggagagttgctttacagtctttttgactgcttcttcagtgaggaggttgtccagtttttgct
gi|8                          :                                                                                                                                                                                                                       gacAG-GCTGTGTAG-AT--ATC--A-CGAT-GCAGTTCCATACAGTTTGC--CTGTA-GC-TGACAGG-CGGAAAATATCATGTCCCTTGTTCCTCAAC-CTG--CGCCGAAGCCATATTGG-CTTCCATCGAGGAGACCCTG-CTCAAGATA-CTTCAGCAAGCG-ATT-AAGTAGAACACGGGCAAG-GATTTTGTCTGCTATTGGTAGGAGGGATATCT-CTCGGTGATT-TC--AC-AGGACTAGC--TT---TTTGCGTTTGT-GAGTGTGG
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ctacga-TTTCAGCAGG-GATGGCGTCAGGGCCGGG--AG---TTTCC-C-CAT-T-GA------TC--ATCT-----GGTTT-CT----TCT--TCA---GAGG-G---AGGGTTTTCGAGTTCT-TAGTTTAA-T----GT--CGC-TTACGAAAG-GCCTGT-GGTTGC--TTCA---TCATTAATCG-CTG-C-AGG--ATGATTGAGTA--CGTT--ATCGAAGTGTTttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggttttcagcagggatggcgtcagggccgggagtttccccattgatcatctggtttcttcttcagagggagggttttcgagttcttagtttaatgtcgcttacgaaaggcctgtggttgcttcatcattaatcgctgcaggatgattgagtacgttatcgaagtgtt
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ctacgaaggctgtgtagatatcacgatgcagttccatacagtttgcctgtagctgacaggcggaaaatatcatgtcccttgttcctcaacctgcgccgaagccatattggcttccatcgaggagaccctgctcaagatacttcagcaagcgattaagtagaacacgggcaaggattttgtctgctattggtaggagggatatctctcggtgatttcacaggactagctttttgcgtttgtgagtgtggttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggtGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACTGTTGCTGTTGAAGTTGCCGACTCCATGCTTCCCGATCAC-TCCTTC-CCAGGAGACGCTGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTA
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       C-GACC-A-ATGTCGTCTTGACTGCAAAGC-CAACT-CCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgaccaatgtcgtcttgactgcaaagccaactcc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): GCTGTACTGCTCTCAGCCTTTGGGAGGATCTGACTCGTTTTCATCAAGACCCCCAGTAACCCCCCCCCATTCCACCACTGCATGCCATTGGGGTAACTGGGCTATGCCAGAGCAAGACAAAACTTGCTGATGCAACCAAATCTTCCTTAACCAAAAATCCGCCGAACTTCTAGCCAAGTGACGGCCAATACTTTTCCAATGGTTCACTTGTTGACCTCGGTCCGAAGGCCTTTGCCACAAATCGACAAAGGTCATAAGTAGCAGGTCACAGTG






Alignments
lowQualScore                  :                                                                                                                                                                                                                                              1111111                                                                                                                                                                                                                                                                                                                              222                                                     2                     5555555555555       1            11  22222                    111                         1111     22222222222           11             111   111        111   111                11    111          1          1  2     2222     11             1      111  11             1        111              11  22   11    1    111            11   1   99999999999999999         33333    22222222                        1            1            222     1   222     1   333333333                 111  333333        11      111  1       111   1        1          22222222    33333      1 111                             1                                                              1                    1         1                  1                            11           1                                  1                      33333333333            2222    11         777777777777777777777777777               1           1                         1                1       11                           1   11           666666666666666666666666666                 11                                         1      11                   1      1                 1                                         11      1              1            1                                                1          22222        11    11                      111  1  22222             11    1          11         2222              4444444   11                 2222222           2222       222222                   1                                  1               11      1    11         1           1  1             11           11        2222222      1             11                 11                                           1                          1        33333333             1    2               444444444        22222       111     1      2222                           1       1   22          1  1   1    1                                         1                        1                 22222      1                          333333                   1                                         1                               3333333333333       1                           1                  11             4444444                    11        1                       111                                                 1    11        11          1   11         1                    1                                          1                        22    11  1                         1               
lowQualScore                  :                                                                                                                                                                                                                            5    0    5  66   5555555 5    1   0        3 66     5  5  2 0  5                   1     1  666  999 5           1   5        0     0     5         5   5        5   5         0        5                     2  0       5    0        66  5    0    2            0        5     0       6                  6  1 6  777           1         2 6  1 1  222  6      6  777   1    77 0                  5       2  6     0         1  8888888888888 8   8 6 777  0   5 11  00000     8    88    1   444    6    3         6     2222  3  44444444444  8      1 99   0      1  777   444    0   111   444   88   8       11    222     3    5          0  0     1111     77             0      111  33    3        0        666        2   3 00  55   33    0    666         0  33   3   88888888888888888 0   6   11111 3  44444444              1  1   44 0    2       0            444  2  0   444  8  0   333333333   7     55      444  888888      0 00 0    777  0   1   777   0  0     0  0       66666666    55555      0 111  8  0  2         0          0          8                      1   1       0                0                    3         3                  3               7            88           3                 0         0      0  2   3    6      6   11111111111  33        1111    22   0     333333333333333333333333333               0           0                         0      0         0       33   2               99      0   22           555555555555555555555555555                 99     6      6                            3      88    0       0  2   0      0    2          3 0    3        1                   6       33      3      6    0  3            0       3             33  2                      5     3    55555   3 0  44    55              7     1 777  0  55555             00    0     3    33   1  4  4444   22 1  2    0000000   33            1    5555555      1 1  0000 44    111111     6   8  8  1 8 0            3   6    8     8    1 0  1 2  1       88 0    0  6 33 1       0        1  5  0   444   1   88    1      00     1  4444444      0     1  1    33       1         33  1     0     1  2 1   9  1      555     0 0   9    1 2          6    0 1      33333333   1 1 1     0    0    2 33  2    888888888        77777       222     2      1111             0   6      1  2       2   00          3  3   3    3              1         44               3                     3  3 0               44444      2     0                    888888              6    3 0           1    3               1      0              8                9999999999999       0       7      1          6 0            1     11             3333333     1              44        5  5     0 1  1   8888  666     3      1  9999   6           7       7      3    99   6    88          3   88    1    3     6              3     7              7      0    7         3          6      6 6    00    88  3                 7       3               
lowQualScore                  :                                                                                                                                                                                                                            .    .    .  ..   ....... .    .   .        . ..     .  .  . .  .                   .     .  ...  ... .           .   .        .     .     .         .   .        .   .         .        .                     .  .       .    .        ..  .    .    .            .        .     .       .                  .  . .  ...           .         . .  . .  ...  .      .  ...   .    .. .                  .       .  .     .         .  ............. .   . . ...  .   . ..  .....     .    ..    .   ...    .    .         .     ....  .  ...........  .      . ..   .      .  ...   ...    .   ...   ...   ..   .       ..    ...     .    .          .  .     ....     ..             .      ...  ..    .        .        ...        .   . ..  ..   ..    .    ...         .  ..   .   ................. .   .   ..... .  ........              .  .   .. .    .       .            ...  .  .   ...  .  .   .........   .     ..      ...  ......      . .. .    ...  .   .   ...   .  .     .  .       ........    .....      . ...  .  .  .         .          .          .                      .   .       .                .                    .         .                  .               .            ..           .                 .         .      .  .   .    .      .   ...........  ..        ....    ..   .     ...........................               .           .                         .      .         .       ..   .               ..      .   ..           ...........................                 ..     .      .                            .      ..    .       .  .   .      .    .          . .    .        .                   .       ..      .      .    .  .            .       .             ..  .                      .     .    .....   . .  ..    ..              .     . ...  .  .....             ..    .     .    ..   .  .  ....   .. .  .    .......   ..            .    .......      . .  .... ..    ......     .   .  .  . . .            .   .    .     .    . .  . .  .       .. .    .  . .. .       .        .  .  .   ...   .   ..    .      ..     .  .......      .     .  .    ..       .         ..  .     .     .  . .   .  .      ...     . .   .    . .          .    . .      ........   . . .     .    .    . ..  .    .........        .....       ...     .      ....             .   .      .  .       .   ..          .  .   .    .              .         ..               .                     .  . .               .....      .     .                    ......              .    . .           .    .               .      .              .                .............       .       .      .          . .            .     ..             .......     .              ..        .  .     . .  .   ....  ...     .      .  ....   .           .       .      .    ..   .    ..          .   ..    .    .     .              .     .              .      .    .         .          .      . .    ..    ..  .                 .       .               
lowQualScore                  :                                                                                                                                                                                                                            0    8    0  99   0000000 0    1   8        1 99     0  0  8 2  0                   0     0  555  444 6           1   0        7     4     7         7   3        0   0         8        0                     5  2       0    9        99  0    9    5            2        7     7       7                  7  0 7  555           0         5 7  0 0  555  7      7  555   0    77 7                  7       9  7     6         4  0000000000000 0   0 0 000  6   0 88  00000     0    66    0   000    0    8         0     2222  2  22222222222  0      0 00   8      0  000   000    8   000   222   88   0       00    444     8    0          0  0     2222     55             0      000  88    2        0        222        5   2 88  55   88    0    555         7  33   3   00000000000000000 7   7   77777 2  88888888              0  0   22 8    5       0            000  5  0   222  8  0   555555555   0     88      000  888888      2 22 8    555  0   0   555   0  2     0  2       00000000    00000      0 555  8  2  5         2          0          0                      0   0       2                0                    3         3                  3               3            33           3                 7         2      0  5   2    5      5   22222222222  55        2222    55   8     555555555555555555555555555               0           0                         0      2         0       88   5               55      0   55           555555555555555555555555555                 33     7      7                            3      33    7       7  5   0      0    5          2 0    2        0                   7       33      3      7    7  3            0       2             55  5                      0     2    00000   2 8  33    77              0     0 555  8  00000             22    0     2    88   0  2  0000   22 0  5    8888888   88            0    0000000      0 0  5555 55    000000     5   8  0  0 0 6            2   4    0     0    0 0  0 5  0       88 8    0  5 88 0       0        0  5  0   555   0   55    0      88     0  2222222      0     0  0    88       0         88  0     2     0  5 0   8  0      222     2 0   2    0 5          5    0 0      55555555   0 0 0     5    0    5 88  5    555555555        77777       333     0      7777             7   7      0  0       0   77          3  3   3    3              0         33               3                     7  3 7               77777      0     7                    333333              7    3 7           0    7               0      0              8                3333333333333       0       0      0          5 0            4     22             2222222     4              00        5  2     7 0  0   7777  555     7      0  2222   7           3       3      3    33   7    33          3   33    0    3     7              3     0              3      7    3         3          7      7 7    77    33  3                 3       3               
consensus                     :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-T--AGGG--CAC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCA-CCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGT-CGCTCAGGAGGCTGCCG-GG-TCCACCGCTGCCTCGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCGCCCGT-GCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGA-CTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA---CGAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CACGNCGCG-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
Reference ( family-425 )      :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-T--AGGG--CAC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCA-CCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGT-CGCTCAGGAGGCTGCCG-GG-TCCACCGCTGCCTCGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCGCCCGT-GCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGA-CTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA---CGAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CACGNCGCG-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
gi|1                          :                                                                                                                                                                                                                        ATAG-GCGGAGTAG-AG--GTC--GGCG-T-GCTGGTCCTGACACTTTTC--CTGCC-CC-TGTCTAC-CAACAAATACCATGTCGATAGTCCCGCGTT-CTT--TCCAGAAACCACACTGG-CTCTCAGGTAGGAGGCCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-TGCGATGATTGTC--GC-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGTG-GCGTCCTTGAAGTCCTGT-GGGA-CT-G-TCTCGTGCTGCTAGATGAGCTGA-AACAGCT-GGTG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCCTTGAAGA-TTTCAGCTGG-GATGGAATCCGAACCAGGT-GA---TTTG--C-CAC-TTGAAAGTAGTCGGG-CT-----GCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGAGCGTCCATGGTCT-C--TTCGAAT--AAGGTTCACATTGGGAGAAAGCCTGTCGATAGCTCATTAATATCGT-GAT-GCGTGTA-AAGTCCTG-TTCAGGAACCGCA--GCCGAAATCTTCTCGCCAATCT-CTTCCAAA----CCTTTCCTTGTCGATGATAAAGGGTTGTA-CC--CATCAGCACTGAG-GAGTGGAGA-GGTGATCCT-AGGTAA-TATTAGG--CCAT-AGAC-T-CCTTCAAGCTGTC-GTAAGAAAG-----CAGAGAGC--CATGTGCGTATACACTGTCTTCCGCAAAGCCTTGAATCTCGTCCGGTTTGCTACTCAACCAGG-AATCCTGCATCT-GGCGCAACTTC--ACTTGA-TGG---T-----GCTACGTACGTTCCTCA-G-TGT-----GTTTTTCTTAGATGCT---GA-CTTTGGG---TCG-TCGAGATG-AGCTTTGTAG--GCAC--GACG-----CTTTTC-CACTAGCAGCTGCTGGATCTCTGTACAGTTCTC-ATCAAACTAG-TCCTTGTGCTTCCTTGTAGCTGGCCCGAGACACTTCATGGCTCTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACACCCTGGCCTTC-CACCACAGTGGAGTCTAAGCGTTGCTCC--AAGATGTTGGC-AAAAGACTGCTTGATGTCGCTGACCTTTAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCACTCCCTGC----GGCC-GTCTCTTGGG---------CTG---------------GATGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCACACATGGTC-TTCGTGA--CTGGTACATCTTGCCTGTTACTCCTCC-TTA-CGATGACGAAGT-------------CAAT----------GCTTTGAGCGGAGATGCA-TCCAT-GACGTCCTGATTCGAGTAGGGAGGTTGAAGACAGT-GTTGGT--GATCAGAAGGTCATGCTCT-GCGCAT-GTTTGGAGTAGTAGTAG-ACCGTTTCTGTTGCAGTTGCCGACTCCATGCTTCCCGATCA-CTCCTTC-CCAGGTGACGTCGT-CACGACCAACTC-TCGCATTAAAATCACAAAGAATAATGAGTTTGTCTGCGTTGGGAACAACGGTGATGACA-----GTGTTCAGG-TCTTTATAAAACTTGTACTTGGTCTCAT---CTGGG-----TTGGTCATGGTGAG-GGCA-ATGGCATTGA--CAATGGCGA----TGTACTTCTGTCCA-TGAGAAAGA--GGGAGTCTCATCGTCAT----TC-GTCATTCACACCCCTTGGGGGA--C-CGTCCAA-CTTGCC-AATC-A-ATGTCGTCTTGACTGCAAAGT-CAACT-CCTGCC-TCTCTTCTCTCTTTGG-GTCCGC-GTCC--AATCCATAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCCTCT-CCTGCCAG--CCTG-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATACCTG--GCGAGTTCACTTGCAATGATTGCTGTGCGTCTCTAAGGTATCT-CTGACTCGTCCCTGTCAAGAAGCGTG-CGAACGTT-----CAGCAAGGGTCAGTGGTGTAATCCTTGTTTTCCTTTTTGAA-----TTTTTTCTTTCA-TTGTTTC--GACCGC--ATGTGTAG-GCCCCCCTCCAGTCGCGGTAAACTGGCTAGAGTAGGTAG--GGCAGGCAATGTT-TGG-GACA-CCTTTTCTAGTCCGCTCTTCATGCCATGGAGGTGAGCAGGG-CGTTCCTAAAGAGGGCTGCTCAGT-CGCCTAGACGGCTGCCGAAA-TCTACTGCTGCTCCGGTTCAGTGAATAGCGACCA------TATGGCCTGAGCCGCCCGT-GTGCAGGTTTGCGGCTACGACTACCAGTGTACTCACACCTG-TCGCTTCGTCGCTCGCCTGTCGCCACAGGACTATTGGGGATGAAGGGATGGTTTGAAGGATGATAAGATGACTTGCGCGATGACTTTGTTTAAAGTGA--AAAGAGTTGCGCATCTCG--TTGACTTCACTCTCTCGCCCAAAAACCATCTGGGTCCAGCAGCAGGACATGGTCGA-GACGGCTGGAGACGGAGGTGGA-TGCAGTGGATGACCGTGGC-TTCCTA-CGTG-TATCGAAAC--GCTCTCTGTG-CTT--CACGACGCG-TTGCTGGGAATCGCTTTTCT-GCCCGTTGAACCAGGTGCTTTCCTCCGCGCAGTCCACCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAAGATCCAGCA-GCATGCCAGCTGATC
gi|10                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCAG-TCCGTGTGCTTCCTTGTAGCTGTCCCTAGGCACTCCATGGCTGTGTTGTAC-ACAGTGTCACGGAGCGCAGC-CCACGTTGT-CTCAACATCCTGGCCTTC-CAGCATAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTAATTCCCTGT----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTATGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CGAT----------
gi|11                         :                                                                                                                                                                                                                          AG-GTTGTGTAG-AGATATC--G--A-T-GTTGTTCTATGCACTTTTC--CTGTA-GC-TAGCTGG-CGGTGAATATCAGGTCCGTTGTTCCTCGGC-TTG--TGCGGAAGCCATATTGA-C
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         catgctgaagaattttggggctaggacacatccctgtttgaccctgtttgccactgaaaggttttggaaggctctccatcaacaaagactcggaccattatgtcatcatggaactggcggactatagtaatggacctacttggggagtcatacctttccgtcattttccagagtccatcacgactgactgtatcaaatgccttagtcaggtctacaaCTGT-TT--GCAAAGCCCTGAACCTACTTAGCT-GATTGCTCAGCCAGG-AGCTCTGCATCTCA-CGCAG-TTTTTGCTGGA-TAA---T-----ATAACGCATGTTCCTCA-A-TA------GTTTTTGG-GGGTGCTATTGA-CTTCGGT---TCG-TCAATGTG-TGTCTTGTAG--ACCT--GATGGGGTTTTTTTC-CG--AAAAGTTGCTGCATTTTCCCGCAGTTTTC-GTCAAACCTG-TCCTTATGCTTCATGGTAGCAGGTCCTTAGCACTGCTTGGCTGTGTTGTAT-GCCGTTTC
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          catgtcattcAACCACCTGG-TCCAGCG-CAGGACATGGTCGAAGCCGGC-GGA-ACGGAGTTGGGGTGCAGTGGATGACCGTGGCTTTCCTAACGTGTTCTCGACAC--GCTCTCTGCGGCTCGCCTCGCCGCAATTGCTGGGAATCGCCTTTCT-GCCCGTTGAACGAGGTGGTTTTCTCCGTGCAG-CCGCCGAATCCCAGTCTTCA-ATGCTAGG--GAC--AACCAACTAAAAGCTGAGGATCGAGG-TCCAGCAGGCATACCAGCTGTT
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                            TCTAGCCAA-GATCTTGCTTGCGATGGATAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTTCTTTGCACTTGTAGAG-GTGGATGATGGAG-GTGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCTGG-TG-AAGTTT-CT-C-AATCAGTG-CCACACCTCCCTCCTTGTAGA-TTTCAGC-
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTAAAGTGA-AGAAGAGTTGCACAG--CG--TCGATTTCACTCTCTCGTCC--GAGGCACCT------AGTAGCAGGAC-TA-TC----ATGATTTGCGATGG-GACGGT-TACGGTGGATG-CCTAGAATATTCTA-CGTGC-CTC--AACCTGCTCTTATCA-CTC--CATAGTGAG-TTGCT-GTAACTGCCTTTATCGCCCG-TGAAC
gi|17                         :                                                                                                                                                                                                          gacatgcgttgggaccAG-GTTGTGTA--AG--ATC--A-CGAT-GTTGTTCCATGCACTTTTC--CTGTAAGC-TGGCGGGGCGGCAAATAC-ATGTCCGTAGTTTCTC--C-CTG--CGCGGAAGCCACATTGAACTTTCAGGGAGGAGACCCTG-CTCAAGATGCCTCAGCAA-GCGAATT-AAGCAG
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ctacgaA-CTGAATTATGATGTCATGGCTTGTGTG-TCATTTGGATTATAGTGA-GGGAGACTTGCCCG----GAATCAATCCCACTCTCTCGTCC-TGAATCGTC-GGGTCCAGTGGCAGGACAGAGTCGA-GACTGTTGGGGACGAACCAGGA-TGCAG
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCTGGACCAGGTGGTT-CCTCCGTGCAGTCCGCCGAAT-CCAGTCTTCACATGGCA-GGAAACAAAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTCg
gi|2                          :                                                                                                                                                                                                                     cctgTAGTGTTGAGTAG-AG--GTC--GGCG-T-TCTGCTCCTGACACTTT-C--CTGTA-GCCTGTCTAG-CAGCAAATACCATGTCGAATGTCCCGCGTT-CT---C-CGGAAACCACCATTG-CTCTCAGGTAGGAGGCCTTGGTTCGAGGTG-TTT-ATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTCCCGC-AAACTTGGCGGTTTCCTTTGCG--TGTAGAG-GTGGATGATGGTAAGCGTCCTTGAAGTCCTGT-GGCA-CTAG-TCTCGTGCTGC-AGATGAGCTGA-AATAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCTT---AGAATTTCAG--GG-GATGGAATCCGAACCAGGTGAA---TTTTGCC-TACGT-GAAAGTAGTCGGA-CT-----GCTTT-CTGAGATCTCATCC---AAGGTGGGTGGGGCGTCCATGGTCTTC--TTCGA-C--AGGG--TAC-TTGGGGTA--ACCTGTCGATAGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGGCCATCTCCT-CAAAA----CCTTCCCTTGTCGGTGATAA-GGGTTG-ACCC--CATCAGCACTGAG-GAGGGGAGACAGTGATCCTGAGGTAAGTA--GGG--CCAT-AGACTTTCCTTCAAACTGT-CGTA-GAA-----------GCGCTTCATGT-CGT-T-C-CTGTC-T--GC-AAGCCCTGAATCTCGTCCGCTTTG-CACTCAACCAGG-AATCCTGCATCTGG-CGCAA-TTC--ACT-TA-TAG---TTGTGAGCT-CGTAC-TTCCTCATG-TG------TCTTTCTTTAGATGCT---GATCTTAGTG---TCG-TCGAGATGTAGCTTTGTAGC-GCACGAGACGC----TTTTTCTCACTAGCAGCTGCTGGATCTCTGTGCAGTTCTC-GTCAAACCAG-CCCTTGTGCTTCCTTGTAGCTGTCCCGAGGCACTCCATGGCTGTGTTGTACAACCGTGTCACGGAGCGCAACGCCACGCTGTCCTCAACATCCTGGCCTTCTCAGCACAAAGGAGTC-AGGCGTTGCTCTCAAAGATGTCGGCAAAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATG-TCAGACGTTTT--------TTTTAAATTCATTCCCTGCTGTTGGCCAGCGTTTTGGGCTTTTAATCCTGTGGCTCTTTTGGGATGACGCGAATATTGAGTTTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTCTTTCGTGA--CTCGTATGTCTTGCCTGTC---CCTCC-TTAGCGATGACGTAGTCAATGAAGAGATCCAAT----------GCTTTGAGCGGGGATGCATTCCATGGACGTCCTGTTACGAGTAGGGAGGTTGAAGACGGTGGTTGGTGAGATCAGAAGGTTGTGCTCTGGCGCAA-GTCTGGAGTAGTAGTAGAACTGTTGCTGTTGAAGTTGCCGACTCCATGCTT-CCGATCACCTCCTTCGCCAGGA-ACGCTGCACACGACCAACTC-TCGCGTT-AAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAG-GGTGATGACA-----GTGTTTAGA-TCTC--TAAAACTTGTCCTT-GTCTCAG---CT-GG-----TTGGTCATGGTGGG-GGCATTAGGCACTGA--CAATGGAGA----TGTAATTCTGCCCATTGAGAAAGGGTGGGAGTCTCATCGTCATAAGACG-ATCGTTCACACTC--TTTGGGA--C-C-GGCCAACTTGTC-GACCAATGT-CCGTCTTGACTGC-AAGC-CAACTCCCTGCCTTCTCTCCTCTCTTCGG-GTCCGC-GT-C--AATCCAAAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCTCTC-TCTGCCAGCTCT-G-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATATCTG--GCGAGTTCTTTTGCAATGAGCGCTGTGCGTCTC-GGGGTCTCTCCTGACTCGTCCCTGTCAAGAAGCGTTGCGAACGTTCCAAGCGGCAAGGGTCAGTGGTGTAA-TCCTGTTTTCCTTTT--GAAGTTTTTCTTTC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                       TAAGGCG-GTT-GAGCAGAACTCTAGCCAAAGATCTTGCTTGCGATGGACAGCAATGAGATTC-CGCGATGATTGTC--GC-AAACTTGGCGGTTTCCTTTGCGTTTGTgt
gi|21                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGTTTACCCACACCTG-TCGCTTCGTCGCTCGCCTG
gi|3                          :                                                                                                                                                                                                                          AG-GTTGTGTAGCAG--ATCACGATG-TTGTTGTTCATGGCACTTTTTTTCTGCA-GC-T---TGG-CGGCGA-TATCAGGTCCGTAGTTCCTCGACGCTG--CGCGGAAGCCACATTGA-CTTTCAGGGAGGAAACCCTG-CTCAAGATG-CTCAGCAAG-CG-ATTTAAGCAGA-CACGGGCAAT-GATTTTG-TTGCTATTGACAG-GGAGATATTCTCTCG-TGATTGTC--AC-AGGACTGGCGATTCCCTTTGCGCTTGTAAAT-GTGAACAATCGTG-GTATTC-TGAACTCTTGCGGGTAGTT-GCTCTCG-ATTCCC--ATGACCTCATAAAAACT---TGTCAGTTGACTGCAGAT--GGGTTCGCACCT--GTCTTTGTAG--TCTCAGCAGG-GATGGCGTCGGGGCCGGG--AGCATTTT---CACAC-T-G--CGTCATCTG--CTTGGTGGCTTTGCTGA-CTTTCTTCTTTAGGGGAGGGT----TGTCAA--GT-T-C--TT-GA-TTAACGC--CAC-CTGTGGTA--GGC-GGCAATTGT---TCA---TCATTGAT-C-GTA-GTTAGGGCGA-TTTGATA--CGCTAAATCGAA--GTT-TCGCCCATCT-CT-CAAGGATTTCCTTT--TTGTCTGTTGCAG-GGTTTT-A-CCAAAATC-GCGCTGAGTAAAGGGAG-----GGTCCTGTTG-AC-TGT-GGGTTCCATCAGAC--TGTTTCAGGGCATCCGTA-GAATTTCCTTC---GAG--TCGTGTGCGT-CGGGC-GTATT--------CCTTGGATTTCTTCAGCTTAGGCACT-GAGCAGGCAATCCTGCATGA-G-CG-AG-TTC---CTGGACTGGACTT-----GCTGCGTTTG-----CA-GATGAAAGCAGCTTTTCTT---TACT---GG-CTTGAGGGATTCGTTTTTGGTG-AGGCTCGGAGCAGC-C--GATG-----TTTCTC-CCTCAG-AAATG-TGGATCTTCATGTCGTTCTCAATCAAACAAGCTCCTGGTG
gi|3                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaTTAAGTTTGGCT-ATGTTGAG----CTTAGCGACAGCT-----TTT-TGCCCTGT----GGTT--TCCGCTGGG---------CTG---------------GATAAAGAGGTTCAT-TTTGGAGACGATCAAGACGATGATCCGTCCAGCAGTCCTGCACACAACATGGCC-TTTGTCAGTCTC-TGCGTCCTGCCTGTCCTTGGTCCAGTA---ATGACGTAGT-------------CAATAGGTGCCAGTGCTTTGATTGAGGGTGC-CTCCATGAAGGTT-TGTTTCGAGTTGGCAGCCGGAACATGGT-GTTGGT--GATGGTCAGGTCATG-TTT-GCGCAACATCT-GAGGAGGAGT----CCG-TGCTATTACATTTGCCTACTATATGTTTgtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtttaagtttggctatgttgagcttagcgacagctttttgccctgtggtttccgctgggctggataaagaggttcattttggagacgatcaagacgatgatccgtccagcagtcctgcacacaacatggcctttgtcagtctctgcgtcctgcctgtccttggtccagtaatgacgtagtcaataggtgccagtgctttgattgagggtgcctccatgaaggtttgtttcgagttggcagccggaacatggtgttggtgatggtcaggtcatgtttgcgcaacatctgaggaggagtccgtgctattacatttgcctactatatgtttttttccc
gi|4                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaaggttgtgtagcagatcacgatgttgttgttcatggcactttttttctgcagcttggcggcgatatcaggtccgtagttcctcgacgctgcgcggaagccacattgactttcagggaggaaaccctgctcaagatgctcagcaagcgatttaagcagacacgggcaatgattttgttgctattgacagggagatattctctcgtgattgtcacaggactggcgattccctttgcgcttgtaaatgtgaacaatcgtggtattctgaactcttgcgggtagttgctctcgattcccatgacctcataaaaacttgtcagttgactgcagatgggttcgcacctgtctttgtagtctcagcagggatggcgtcggggccgggagcattttcacactgcgtcatctgcttggtggctttgctgactttcttctttaggggagggttgtcaagttcttgattaacgccacctgtggtaggcggcaattgttcatcattgatcgtagttagggcgatttgatacgctaaatcgaagtttcgcccatctctcaaggatttcctttttgtctgttgcagggttttaccaaaatcgcgctgagtaaagggagggtcctgttgactgtgggttccatcagactgtttcagggcatccgtagaatttccttcgagtcgtgtgcgtcgggcgtattccttggatttcttcagcttaggcactgagcaggcaatcctgcatgagcgagttcctggactggacttgctgcgtttgcagatgaaagcagcttttctttactggcttgagggattcgtttttggtgaggctcggagcagccgatgtttctccctcagaaatgtggatcttcatgtcgttctcaatcaaacaagctcctggtggtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtCAACGCGTGGCATTAAAATCACCACGAA--AT-AGTTTATCAGACTTGGGAATAG--ATGA--ACAAGGGAGTG---AGCCTCCTCGTAAGAACTGTCTTTAGTTTCCTTTCCTCGGAGGTTTTGTTCATGTTGGAAGGCA-TAGAC-CTGGATCAGAGGTGACATTTGTCTTACGGTCCA-C-----AGG--AGGAGCTGCATCTTCATAC-CCT-ATCATTAAGAC----TCAGGAATGC-TTTGCAAGCTTTTCTGGAC-ATGTGTTGTTTTGA-TGCGAAAC-CCACT-CCTGAC-TCGCGTCGCTCTTCGCTGCTTGC-GCCC--ACTCCAAAG-AAGGTGTAACC-GC-TTCCCCATCTCAGTTAATTGGCCTTTTGTCTGCAAG--CG-A-GTTTCAACTAAGAGTCGCAAATCATCGATCTTGTATTTTTTGCCAGTTCCTTTGCTACTAGTGC-GTTCGTCTCTCTGGCCTAT-CTT-TTTGGTGTTGTCAGTAA-CGTT-CTGACGTTTC---CA-TGATGCTAGGTGA-GCAAACCTT----TGCTTTT---A-----TTCTTTCT---AAGTATTTCGAGACCGCCAAAGGG--GTGATCTCCGCCAGCTGCG-TATGCTTAC-AGGGTGG-TAGTAGGCAGGCTAT-TTATAGTGGCAACCTTTCTTAGCCCGTTCCTCAAGCTGTGGAGGCGAGCAGAGTCGATCCAAAAGAGGACTGCTCCGTTCACTCACGAGGCTGCCG-GGCTCCATCG-TGCCTTGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCG-CTGTGGTGCAGGTTCGCGTCTACCGCTCCCAGTGTATCCTCAGCTACTTTCTTCGCCGCTT-CCCATCGCCACAGGAC--TT--GAAT---AGGATGA-CTGGATG-TGATGTATCGACTTGCG-G-TGACTTGGATTATAGTGAGGGGAGACTTGCGCA----GAATCGGCCTCACTCTCTCGT-C-TGAATCGCC-GGGTCCAGTGGCAAGACAGAGTC-C-GACGG-TGGAGA--GAATCAGA-TGCttttccc
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cattccagacatggtagtcggcaCTGTCTTCAGTTTCCT---CAAGG-----TTCGTCCTTGTTGT-AGCA-TATACACTGA--TCAGGGTGACATTTGTCTTGCT-TCCA-------AAG--GGGAGCTTTATCTTCATAA-TCCTATCACTAAGACCT--TCAGGAA--TGCTTGTAAGCTT-CT-GGAC-ATGTGTTGTTTCGATGGAGAAACACAA-T-CCTGAC-TCGTGTCGCTCTTCG----CTGCTGTTCTCACTCCAAAAGAACATGTAACC-GCTACCA--TTCTCAATTAATTGGCCTTTG-TCTGCAAA--GC-GAGTTTCA-CTAAGAGCTGCAA--TATTAATCTTGTATCTG--GCCAGTTCCCTTGCCACTACTTCAGTTCATCTCTCTGGCCTTT-CTGCTTTGGTGTTATCAAGTAACATT-CTAACGTTCC-----ATGATGCTAAGGTGCGCAA-CTTTGTCGTC--------------TTCTTTCT---A-GTATTTCGA--CTGCTAAAAGG--G-GATCCCCGCCAGCTGCAGTATGCTAACCAGGGTGGATTA-AAACAGGCTAT-TT-TAG-GGCA-CCTTTTCTAACCCCGTCCTCATGCTCTGGAGGCGAATAGAG-CGATCCTAAAGAGGACTGTTCGGT-CACTCAGGAGGCTGCCG-GG---CACCATTGTCTTGGTCCAATAAAGGACGATCACTTAAGCTTGTCCTAAACCGCCCAT-GCGTAGGGTCGCAACTACAACTCCCAGTGTATCCTAACCCA-CTGCTTTGCCGCTTCAACATCGCGACAGGGC--TTAGA------AGGATGA-CTGAATGGTGATGTCATGACCTGCGCG-TGACTTGGATTATAGTGA-GTGAAACTTGCGCA----GAATCGACATCACTCTCTCGTCC-TGAATTGCC-GGATCCAGTGACA-----------A-GACAGCTGGAGACGATCAAAGA-TGCAGcagc
gi|6                          :                                                                                                                                                                                                                           g-GTCATGTAG-AG--ATC--GCAG-T-GCTGCTCTTGGTATTTCTC--CTGGA-GT-TGGCGCG-CAGCAAATATCATGTCCGCTGTCCCACGTT-CGG--CGCGGAAGTCGCACTGG-CTTTCTGGGAGGAGTCTTTT-TTCAAGGTG-TTGGATTAGACG-GTT-TAGCAGTACACGAGTCAG-TATCTTCCCAGCTATGGACTGGAGGGAGATGC-CTCTGCGATTATT--GCAAGAC-TGACGGTTTCCTTTCCTCTTGTAGAT-GTCGACAACGCTG-GCATCCTTGAACTGTTGT-GGGA-CT-T-TTTCCTCGTGCCACTTGGGTT----------------AGATTT-CT-G-TATTATGA--CGTGCCTCCTGCCTTGTACA-CTTCTGC-AGTGATAG
gi|7                          : gctgaagagggtcggagccagcatgcagcactgttttacaccgtttgtcactgtgaaggcatctgactcgtctccatcatctagtaccttcaccatcatgccattgtggaaatgtcgaacaaacgtggtaaacttgctggggcagccgaatttttctatgatcttccataagccctccctgctgaccgtgtcaaaggcctttcagatcgacaaatATAG-GTGGAGTAG-AG--GTA--GGCG-T-TCTGCTCCTGACACTT-----CTGTA-GC-TGTCTAG-CAGCAAATACCATGTCGATAGTCCCGCGTT-TTTTTC-CGGAAACCACACTGG-CTCTCAGGTAAGAGGTCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAATTCTATTCAA-GATCTTGCTTGCGATGGACAACAGTGAGATTC-CGCGATGATTGTT--GT-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGAG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGTTGCCAGATGGGCTGA-AACACCTCG-TG-AACTTT-CT-C-GATCAGGG-CCACATCTCCCTCCTTGTAGA-TTTAAACTGG-AATGGAATCCGAA------------------C-CAC-TGGAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGGGCGTCTATGGTCT-C--TTCTA-C--AGGG---AC-TTGGGGTA--GCCTGTCGATGGC--ATCA---TCGTTGAT-G-GTG-G-AAGTTCTG-TTCAGGA--TGCT--TTTAAAATGTT-CCGCCCATCT-CTGCAAAA----CTGTT--TTGTCGGTGATAA-GAGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACAGTAATCCTGAGGTAG-TA--GGA--CCAA-AGAC-TTCCTTCAActttgccacaggagagttgctttacagtctttttgactgcttcttcagtgaggaggttgtccagtttttgct
gi|8                          :                                                                                                                                                                                                                       gacAG-GCTGTGTAG-AT--ATC--A-CGAT-GCAGTTCCATACAGTTTGC--CTGTA-GC-TGACAGG-CGGAAAATATCATGTCCCTTGTTCCTCAAC-CTG--CGCCGAAGCCATATTGG-CTTCCATCGAGGAGACCCTG-CTCAAGATA-CTTCAGCAAGCG-ATT-AAGTAGAACACGGGCAAG-GATTTTGTCTGCTATTGGTAGGAGGGATATCT-CTCGGTGATT-TC--AC-AGGACTAGC--TT---TTTGCGTTTGT-GAGTGTGG
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ctacga-TTTCAGCAGG-GATGGCGTCAGGGCCGGG--AG---TTTCC-C-CAT-T-GA------TC--ATCT-----GGTTT-CT----TCT--TCA---GAGG-G---AGGGTTTTCGAGTTCT-TAGTTTAA-T----GT--CGC-TTACGAAAG-GCCTGT-GGTTGC--TTCA---TCATTAATCG-CTG-C-AGG--ATGATTGAGTA--CGTT--ATCGAAGTGTTttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggttttcagcagggatggcgtcagggccgggagtttccccattgatcatctggtttcttcttcagagggagggttttcgagttcttagtttaatgtcgcttacgaaaggcctgtggttgcttcatcattaatcgctgcaggatgattgagtacgttatcgaagtgtt
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ctacgaaggctgtgtagatatcacgatgcagttccatacagtttgcctgtagctgacaggcggaaaatatcatgtcccttgttcctcaacctgcgccgaagccatattggcttccatcgaggagaccctgctcaagatacttcagcaagcgattaagtagaacacgggcaaggattttgtctgctattggtaggagggatatctctcggtgatttcacaggactagctttttgcgtttgtgagtgtggttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggtGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACTGTTGCTGTTGAAGTTGCCGACTCCATGCTTCCCGATCAC-TCCTTC-CCAGGAGACGCTGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTA
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       C-GACC-A-ATGTCGTCTTGACTGCAAAGC-CAACT-CCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgaccaatgtcgtcttgactgcaaagccaactcc


blockSeqs                     :                                                                                                                                                                                                                            T         C  AT   ACGATG  T    T            T TT     A  C  G    G                   T     T  ACG  TTT G           T   A                    G         C   A        A   T                  A                     C          T             CC  A         G                     T             A                  G  C G  AG            C         G T  C G  GG   T      A  GCA   C    TT                    A       A  T               A  TGAATTTTGC    A   G G AAA      G AT  TGGTG     G    GA    A   TTA    T    G         T     TAG   C  TTAACGCC     .      T G           A  A     .          CG    GT    TC   A       .     AAA     A    C          C  G     ATTT     CC             .      AC   AA    A        T        ACA        G   T AG  T    TT    C    TTT            CC   .   TTTCCTTCGAGT          G   CGGG  T  TTGCA                 C  A   TT T    C       C            CA   C  .   TTG  G  C   TTGTGA      A     GT      TG   AAAGCA        TA      ATT  T   C   GAT   T        T          CGCACGA     GGGTT      T ACT  A     C                    A          C                      T   T                        A                    G         C                  T               T            CA           A                                  G  G   T    G      G   TTTTAAA      AA        TGTT    AG         CTTTTAATCCTGTGGCTCTTTTGGGAT               T           T                         C                T       GT   G               CT      A   GC           CAATGAAGAGATCCAAT                           AT     G      C                            G      GA               C   G      C    G          A A    T        A                   C       CC      G      G       A            G       A             TG  G                      C     T    AGGGA   T    CC    CG              A     A TTC  C  AGGTT             AA    T     A    AT   T  A  CATT   AA T  G    TTGAGAA   GT            G    AAGACG       C C  TC   TT    TGCTT      A   G  T  C A T            C   G    A     C    C T  T T  T       CT      T  C TC A       G        T  T  T   TCT   A   TT    C      TG     C  CTCTG        A     C  A    AT       G         TT  G           A  G G   T  G      TCT       C   A    T C          G    G G      CCAAGCGG   G G C     T    A    G TT  C    GAAGTTT          AA          GAG     C      GT                   G      T  C       A   TA          .  A   T    A              T         TG               T                     C  T                 GGCT       T                          CTTAAG              C    G             T    C               A      C              G                TTGAAT              .       A      C          T .            A     GG             GCG         T              T         T  G       G  G   ATGG  GAA     C      C  AGTT   G           A       T      A    TT   G    CT          G   GC    C    A     G              C     T              T           T         C          C      G G    AA    AA  A                 A       G
blockSeqs                     :                                                                                                                                                                                                                            .         .  .    ACGA    .    T            T .      .  .  G    .                   A     T  GC   G   G           T   .                    .         .   A        .   .                  .                     C          .             .   .         G                     .             .                  .  C .  GC            C         G .  T G  CG   .      .  C     C    C                     .       T  .               G  AGCATTTT      .   . . AAA      T A   .         .    C     T   .      A    A         T     TC    C  CAGGGT       .      T .           T  A     .          G     G     GG   .       .     G       A    .          .  .     .        .              .      A    .     A        .        ACA        G   T C   .    .     .    TT             C    .   GCGCTT                .   TC    T  CTGC                  G  C   TA G    C       .            GG   C  .   A    G  .   ACTT        G     T       GA   .             G       .    .   A   .     .        .          CAGCC       C          . CTC  C     C                    .          .                      G   T                        .                    .         .                  .               .            .            .                                  .  G   T    A      A   ACAGCT       CA        .       G          CTG                                       .           .                         .                .       .    G               CT      .   C            CAATAGGTGCCAGT                              C      G      .                            .      .                C   .      .    G          A .    T        C                   .       C       .      .       .            .       A             TG  G                      .     T    .       T    A     .               A     C .    A  .                 G     .     A    .    A  T  CATT   CT A  G    C         .             T    AATCCT       A G  CT   CA    TGCT       G   T  .  A . T            T   G    .     .    A .  G G  G       G       .  T .  C       .        A  .  .   CCC   T   TT    G      C      A  GCGA         .     A  C    .        C         .   C           T  T G   A  T      TCT       .   C    G G          A    . T      TCCA       T C A     C    .    G CG  C    A                A           GA      T      G                    .      A  .       .   A           .  .   .    .              G         TC               .                     G  .                 GG         .                          .                   .    .             A    A               T      .              C                TTAGA               .       G      A          C .            T     A              GAA         C              T         T  G       G  G   AGAG  GA      T      T  ACCA   .           .       T      .    C    .    .           .   .     G    .     .              .     C              .           .         .          .      . .    .     .   .                 .       .
blockSeqs                     :                                                                                                                                                                                                                            .         .  .    GGCG    .    C            T .      .  .  T    .                   T     G  TT   G   G           A   .                    .         .   G        .   .                  .                     C          .             .   .         G                     .             .                  .  T .  G             C         C .  A A  G    .      .  C     T    C                     .       A  .               G  AGTTTCC       .   . . C        G A   .         .    A     A   .      T    A         A     C     T  CAGGG        .      T .           G  T     .          C     G     TT   .       .     T       G    .          .  .     .        .              .      A    .     .        .        .          G   . G   .    .     .    T                                                       .  ATT                   T  A   G  .    .       .            G    .  .   .    .  .   T           .     G       A    .             T       .    .   G   .     .        .          ACCT        .          . G    .     .                    .          .                      T   G                        .                                                                                                                              .  .   .    .      .   CT           T         .       .          CTG                                       .           .                         .                .       .    .               .       .   .            CGAT                                                                                                           .   .      .    .          . .    .        A                                                               .       .             .   .                      .     .    .       .                          .     C .    .  .                 T     .     .    .    G  T  .      CT G  .    .         .             T    ACCCT        A G  .    CA    CC         G   .  .  A . T            C   A    .     .    A .  G G  G       .       .  . .  C       .        A  .  .   A     T   .     G      G      A  CGA          .     A  T    .        C         .   C           C  T C   .  T      GG        .   .    G G          .    . T      CCA        T C A     .    .    . .   .    .                                                                                                                                                                                                                                                                                                     T      .              .                                    .       .      C          . .            T     G              GAA         C              T         .  A       G  G   AGAG  C       T      C  AATC   .                                                                                               .                                                                                                  
blockSeqs                     :                                                                                                                                                                                                                            .         .  .    GCAG    .    T            T .      .  .  G    .                   A     T  TT   G   G           T   .                    .         .   G        .   .                  .                     G          .             .   .         G                     .             .                  .  G .  T             C         G .  C C  .    .      .  G     C    C                     .       .  .               .  .             .   . . A        . .   .         .    .     .   .      .    .         .     C     .  TGTC         .      A .           T  .     .          G     C     .    .       .     A       .                                                                                                                                                                                                                                                                                                                                                                                                                                      .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               .  C . .            .   .    .     .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     T     G              GAA         A              .         .  .       A  A   TA    A       C      C  TCAA   .                                                                                                                                                                                                  
blockSeqs                     :                                                                                                                                                                                                                            .         .  .    GGCG    .    C            G .      .  .  T    .                   T     A  TT   G   G           C   .                    .         .   C        .   .                  .                     C          .             .   .         G                     .             .                  .  C .  G             .         . .  . .  .    .      .  C     .    .                     .       .  .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            .  .       .  .   .     .       .      .  GAC    .                                                                                                                                                                                                  
blockSeqs                     :                                                                                                                                                                                                                            .         .  .    ACGA    .    C            . .      .  .  A    .                   A     G  AC   G   .           C   .                    .         .   .        .   .                  .                     G          .             .   .         T                     .                                                                                                                          .       .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
blockSeqs                     :                                                                                                                                                                                                                            .         .  .    GA      .    T            . .      .  .  .    .                   T     T  C    .   .           T   .                                           .   .                  .                     .          .             .   .         .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            


blockSeqCons                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   G**                                                                           GTTCC********                                                                                      TAGNC******           **             A**   ***        G**   G**                **                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  G*             GAA****                    T*                                GA*
originalCons                  :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG---TTT---C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-T--AGGG--CAC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCA-CCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGT-CGCTCAGGAGGCTGCCG-GG-TCCACCGCTGCCTCGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCGCCCGT-GCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGA-CTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA---CGAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CACGNCGCG-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
finalCons                     :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCTG--TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGGTTCC--------C-CAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGATAGNC------AC-TTGGGGTA--GCCTGTCGATNGCA--TCA---TCGTTGATG--GTGG--AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCT-CT-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-A-CC--CATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGAC-TTCCTTCAAGCCGTCCGTA-GAA-------C---GAGC-TCGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCAC--GACG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCA-CCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGT-CGCTCAGGAGGCTGCCG-GG-TCCACCGCTGCCTCGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCGCCCGT-GCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGA-CTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGAG-GGAGACTTGCGCAGAA----TCGACCTCACTCTCTCGTCCT-GAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CACGNCGCG-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): GCTGTACTGCTCTCAGCCTTTGGGAGGATCTGACTCGTTTTCATCAAGACCCCCAGTAACCCCCCCCCATTCCACCACTGCATGCCATTGGGGTAACTGGGCTATGCCAGAGCAAGACAAAACTTGCTGATGCAACCAAATCTTCCTTAACCAAAAATCCGCCGAACTTCTAGCCAAGTGACGGCCAATACTTTTCCAATGGTTCACTTGTTGACCTCGGTCCGAAGGCCTTTGCCACAAATCGACAAAGGTCATAAGTAGCAGGTCACAGTG






Alignments
lowQualScore                  :                                                                                                                                                                                                                                              1111111                                                                                                                                                                                                                                                                                                                              222                                                     2                     6666666          1            11  22222                    111                         1111     4444444444            11             111   111        111   111                11    111          1           222     2222     11             1      1   2222            1        111              11  22   11    1    111             2   1   99999999999999999         33333      1111                          1            1            222     1   222     1   333333333                 111  333333        11      111  1       111   1        1          22      333333333      1 111                             1                                                              1                    1         1                  1                            11           1                                  1                      33333333333            2222    11         777777777777777777777777777               1           1                         1                1       11                           1   11           666666666666666666666666666                 11                                         1      11                   1      1                 1                                         11      1              1            1                                                1          22222        11    11                      111  1  22222             11    1          11         2222              4444444   11                 2222222           2222       222222                   1                                  1               11      1    11         1           1  1             11           11        2222222      1             11                 11                                           1                          1        33333333             1    2               444444444        22222       111     1      2222                           1       1   22          1  1   1    1                                         1                        1                 22222      1                          333333                   1                                         1                               3333333333333       1                           1                  11             1111                       11        1                       111                                                 1    11        11          1   11         1                    1                                          1                        22    11  1                         1               
lowQualScore                  :                                                                                                                                                                                                                            5    0    5  66   5555555 5    1   0        3 66     5  5  2 0  5                   1     1  666  999 5           1   5        0     0     5         5   5        5   5         0        5                     2  0       5    0        66  5    0    2            0        5     0       6                  6  1 6  777           1         2 6  1 1  222  6      6  777   1    77 0                  5       2  6     0         1  8888888  6     8 6 777  0   5 11  00000     8    88    1   444    6    3         6     2222  3  1111111111   8      1 99   0      1  777   444    0   111   444   88   8       11    222     3    5           111     1111     77             0      0   0000   3        0        666        2   3 00  55   33    0    666         0   3   3   88888888888888888 0   6   11111 3  8 9999   9            1  1   44 0    2       0            444  2  0   444  55 0   333333333   7     55      444  888888      0 00 0    777  0   1   777   0  0     0  0       55  9   666666666      0 111  8  0  2         0          0          8                      1   1       0                0                    3         3                  3               7            88           3                 0         0      0  2   3    6      6   11111111111  33        1111    22   0     333333333333333333333333333               0           0                         0      0         0       33   2               99      0   22           555555555555555555555555555                 99     6      6                            3      88    0       0  2   0      0    2          3 0    3        1                   6       33      3      6    0  3            0       3             33  2                      5     3    55555   3 0  44    55              7     1 777  0  55555             00    0     3    33   1  4  4444   22 1  2    0000000   33            1    5555555      1 1  0000 44    111111     6   8  8  1 8 0            3   6    8     8    1 0  1 2  1       88 0    0  6 33 1       0        1  5  0   444   1   88    1      00     1  4444444      0     1  1    33       1         33  1     0     1  2 1   9  1      555     0 0   9    1 2          6    0 1      33333333   1 1 1     0    0    2 33  2    888888888        77777       222     2      1111             0   6      1  2       2   00          3  3   3    3              1         44               3                     3  3 0               44444      2     0                    888888              6    3 0           1    3               1      0              8                9999999999999       0       7      1          6 0            1     11             7777 5      1              44        5  5     0 1  1   8888  666     3      1  9999   6           7       7      3    99   6    88          3   88    1    3     6              3     7              7      0    7         3          6      6 6    00    88  3                 7       3               
lowQualScore                  :                                                                                                                                                                                                                            .    .    .  ..   ....... .    .   .        . ..     .  .  . .  .                   .     .  ...  ... .           .   .        .     .     .         .   .        .   .         .        .                     .  .       .    .        ..  .    .    .            .        .     .       .                  .  . .  ...           .         . .  . .  ...  .      .  ...   .    .. .                  .       .  .     .         .  .......  .     . . ...  .   . ..  .....     .    ..    .   ...    .    .         .     ....  .  ..........   .      . ..   .      .  ...   ...    .   ...   ...   ..   .       ..    ...     .    .           ...     ....     ..             .      .   ....   .        .        ...        .   . ..  ..   ..    .    ...         .   .   .   ................. .   .   ..... .  . ....   .            .  .   .. .    .       .            ...  .  .   ...  .. .   .........   .     ..      ...  ......      . .. .    ...  .   .   ...   .  .     .  .       ..  .   .........      . ...  .  .  .         .          .          .                      .   .       .                .                    .         .                  .               .            ..           .                 .         .      .  .   .    .      .   ...........  ..        ....    ..   .     ...........................               .           .                         .      .         .       ..   .               ..      .   ..           ...........................                 ..     .      .                            .      ..    .       .  .   .      .    .          . .    .        .                   .       ..      .      .    .  .            .       .             ..  .                      .     .    .....   . .  ..    ..              .     . ...  .  .....             ..    .     .    ..   .  .  ....   .. .  .    .......   ..            .    .......      . .  .... ..    ......     .   .  .  . . .            .   .    .     .    . .  . .  .       .. .    .  . .. .       .        .  .  .   ...   .   ..    .      ..     .  .......      .     .  .    ..       .         ..  .     .     .  . .   .  .      ...     . .   .    . .          .    . .      ........   . . .     .    .    . ..  .    .........        .....       ...     .      ....             .   .      .  .       .   ..          .  .   .    .              .         ..               .                     .  . .               .....      .     .                    ......              .    . .           .    .               .      .              .                .............       .       .      .          . .            .     ..             .... .      .              ..        .  .     . .  .   ....  ...     .      .  ....   .           .       .      .    ..   .    ..          .   ..    .    .     .              .     .              .      .    .         .          .      . .    ..    ..  .                 .       .               
lowQualScore                  :                                                                                                                                                                                                                            0    8    0  99   0000000 0    1   8        1 99     0  0  8 2  0                   0     0  555  444 6           1   0        7     4     7         7   3        0   0         8        0                     5  2       0    9        99  0    9    5            2        7     7       7                  7  0 7  555           0         5 7  0 0  555  7      7  555   0    77 7                  7       9  7     6         4  6666666  4     0 0 000  6   0 88  00000     0    66    0   000    0    8         0     2222  2  0000000000   0      0 00   8      0  000   000    8   000   222   88   0       00    444     8    0           000     2222     55             0      0   0000   2        0        222        5   2 88  55   88    0    555         7   3   3   00000000000000000 7   7   77777 2  8 5555   2            0  0   22 8    5       0            000  5  0   222  00 0   555555555   0     88      000  888888      2 22 8    555  0   0   555   0  2     0  2       00  2   888888888      0 555  8  2  5         2          0          0                      0   0       2                0                    3         3                  3               3            33           3                 7         2      0  5   2    5      5   22222222222  55        2222    55   8     555555555555555555555555555               0           0                         0      2         0       88   5               55      0   55           555555555555555555555555555                 33     7      7                            3      33    7       7  5   0      0    5          2 0    2        0                   7       33      3      7    7  3            0       2             55  5                      0     2    00000   2 8  33    77              0     0 555  8  00000             22    0     2    88   0  2  0000   22 0  5    8888888   88            0    0000000      0 0  5555 55    000000     5   8  0  0 0 6            2   4    0     0    0 0  0 5  0       88 8    0  5 88 0       0        0  5  0   555   0   55    0      88     0  2222222      0     0  0    88       0         88  0     2     0  5 0   8  0      222     2 0   2    0 5          5    0 0      55555555   0 0 0     5    0    5 88  5    555555555        77777       333     0      7777             7   7      0  0       0   77          3  3   3    3              0         33               3                     7  3 7               77777      0     7                    333333              7    3 7           0    7               0      0              8                3333333333333       0       0      0          5 0            4     22             0000 6      4              00        5  2     7 0  0   7777  555     7      0  2222   7           3       3      3    33   7    33          3   33    0    3     7              3     0              3      7    3         3          7      7 7    77    33  3                 3       3               
consensus                     :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGGT-AG--TTTTCCCAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-TA--GGG--CAC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCTC-T-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-ACC--C-ATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGACTT-CCTTCAAGCCGTC-GTA-GAA-------C---GAGCT-CGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-GGCGCAG-TTC--GCTNGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCACGA--CG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCA-CCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGT-CGCTCAGGAGGCTGCCG-GG-TCCACCGCTGCCTCGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCGCCCGT-GCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGA-CTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA----GAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CACGNCGCG-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
Reference ( family-425 )      :                                                                                                                                                                                                                        ATAG-GTTGTGTAG-AG--ATC--GGCG-T-GCTGCTCCTGGCACTTTTC--CTGTA-GC-TGNCTGG-CGGCAAATACCATGTCCGTNGTCCCNCGTC-CTG--CGCGGAAGCCACACTGG-CTCTCAGGGAGGAGGCCCTG-CTCGAGGTG-CTCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTCCTTTGCGCTTGTAGAG-GTGGACGATGGTG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCGCACCTCCCTCCTTGTAGA-TTTCAGC-GG-GATGGAATCCGAACCGGG--G----TTCCCCAC-T-GAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---GAGGTGGGTAGGGCGTCCATGGTCT-C--TTCGA-TA--GN---CAC-TTGGGGTA--GCCTGTCGATNGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGCCCATCTC-T-CAAAA----CCTTTCCTTGTCGGTGATAA-GGGTTG-ACC--C-ATCAGCACTGAG-GAGGGGAGACGGTGATCCTGAGGTAA-TAT-GGG--CCAT-AGACTT-CCTTCAAGCCGTCCGTA-GAA-------C---GAGCT-CGTGTGCGT-TGCGCTGTCTT--GCAAAGCCCTGAATCTCNTCNGCTTNGNCACTCAACCAGG-AATCCTGCATCT-G-CGCAG-TTC--GCTGGA-TGG---T-----GCTACGTACGTTCCTCA-G-TG------GCTTTTCTTAGATGCT---GA-CTTNGGG---TCG-TCGAGGTG-AGCCTTGTAGC-GCACGA--CG-----TTTTTC-CGCTAGCAGCTGCTGGATCTCCGTGCAGTTCTC-GTCAAACCAG-TCCTTGTGCTTCCTTGTAGCTGNCCCNAGGCACTCCATGGCTGTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACATCCTGGCCTTC-CAGCACAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTCGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCATTCCCTGC----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTACGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CAAT----------GCTTTGAGCGGGGATGCACTCCATGGACGTCCTGTTTCGAGTAGGGAGGTTGAAGACGGT-GTTGGT--GATCGGAAGGTCGTGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACCGTTGCTGTTGNAGTTGCCGACTCCATGCTTCCCGATCACCTCCTTC-CCAGGAGACGCCGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTAGN-TCTTCGTAAAACCTGTCCTTAGTCTCNT---CTNGG-----TTGGTCATGGTGGG-GGCA-TAGGCACTGA--CAANGGCGACATTTGTNTTNCTGTCCA-CGAGAAAGG--GGGAGCCTCATCNTCATAA-NCC-ATCATTNANACCC--TCGGGGA--C-CTTGCAAGCTTGCC-GANC-ATGTGTCGTCTTGACTGCGAAGC-CAACT-CCTGNC-TCNCGTCNCTCTTCGG-GTCCGC-GTCC--ANTCCAAAA-AAGGTGTANCCTGC-ACCTCTTTCNCAATTAGTTNGCCTTTT-TCTGCNAG--CC-G-GTTTCG-CTAAGNGCNGCGA--TGTCGATNTTGTATCTG--GCNAGTTCCCTTGCNACGANTGCTGTNCGTCTCTNNGGCCTCT-CTGACTCGNCGCTGTCAAGAAGCGTT-CNAACGTTCC---CGGCGANGNTNAGTGGCGCAA-CCTTGTTTTCCTTTT--GA-----TTCTTTCT---A-GTATTTCGAGACCGCCAAAGGG--G-GATCCCCGCCAGCCGCGGTATGCTNACCAGGGTGGGTAG-AGGCAGGCTAT-TT-TAG-GGCA-CCTTTTCTAGCCCGNTCCTCATGCCGTGGAGGCGAGCAGAG-CGATCCTAAAGAGGACTGCTCGGT-CGCTCAGGAGGCTGCCG-GG-TCCACCGCTGCCTCGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCGCCCGT-GCGCAGGTTCGCGNCTACGACTCCCAGTGTACCCNCACCTG-TCGCTTCGCCGCTCGCCCGTCGCCACAGGAC--TTGGGGAT---AGGATGA-CTGAATGATGATGTNATGACTTGCGCG-TGACTTGGATTATAGTGA-GGGAGACTTGCGCA----GAATCGACCTCACTCTCTCGTCC-TGAATCGCCTGGGTCCAGCGGCAGGACATAGTCGA-GACGGCTGGAGACGGAGNCGGA-TGCAGTGGATGACCGTGGCTTTCCTA-CGTGCTCTCGAAAC--GCTCTCTGCG-CTC--CACGNCGCG-TTGCTGGGAATCGCCTTTCT-GCCCGTTGAACCAGGTGGTTTCCTCCGCGCAGTCCGCCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTC
gi|1                          :                                                                                                                                                                                                                        ATAG-GCGGAGTAG-AG--GTC--GGCG-T-GCTGGTCCTGACACTTTTC--CTGCC-CC-TGTCTAC-CAACAAATACCATGTCGATAGTCCCGCGTT-CTT--TCCAGAAACCACACTGG-CTCTCAGGTAGGAGGCCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-TGCGATGATTGTC--GC-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGTG-GCGTCCTTGAAGTCCTGT-GGGA-CT-G-TCTCGTGCTGCTAGATGAGCTGA-AACAGCT-GGTG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCCTTGAAGA-TTTCAGCTGG-GATGGAATCCGAACCAGGTGA----TTTGCCAC-TTGAAAGTAGTCGGG-CT-----GCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGAGCGTCCATGGTCT-C--TTCGAATA--AGGTTCACATTGGGAGAAAGCCTGTCGATAGCTCATTAATATCGT-GAT-GCGTGTA-AAGTCCTG-TTCAGGAACCGCA--GCCGAAATCTTCTCGCCAATCTC-TTCCAAA----CCTTTCCTTGTCGATGATAAAGGGTTGTACC--C-ATCAGCACTGAG-GAGTGGAGA-GGTGATCCT-AGGTAA-TATTAGG--CCAT-AGACT--CCTTCAAGCTGTC-GTAAGAAAG-----CAGAGAGC--CATGTGCGTATACACTGTCTTCCGCAAAGCCTTGAATCTCGTCCGGTTTGCTACTCAACCAGG-AATCCTGCATCT-GGCGCAACTTC--ACTTGA-TGG---T-----GCTACGTACGTTCCTCA-G-TGT-----GTTTTTCTTAGATGCT---GA-CTTTGGG---TCG-TCGAGATG-AGCTTTGTAG--GCACGA--CG-----CTTTTC-CACTAGCAGCTGCTGGATCTCTGTACAGTTCTC-ATCAAACTAG-TCCTTGTGCTTCCTTGTAGCTGGCCCGAGACACTTCATGGCTCTGTTGTAC-GCCGTGTCACGGAGCGCAGC-CCACGCTGT-CTCAACACCCTGGCCTTC-CACCACAGTGGAGTCTAAGCGTTGCTCC--AAGATGTTGGC-AAAAGACTGCTTGATGTCGCTGACCTTTAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTCACTCCCTGC----GGCC-GTCTCTTGGG---------CTG---------------GATGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCACACATGGTC-TTCGTGA--CTGGTACATCTTGCCTGTTACTCCTCC-TTA-CGATGACGAAGT-------------CAAT----------GCTTTGAGCGGAGATGCA-TCCAT-GACGTCCTGATTCGAGTAGGGAGGTTGAAGACAGT-GTTGGT--GATCAGAAGGTCATGCTCT-GCGCAT-GTTTGGAGTAGTAGTAG-ACCGTTTCTGTTGCAGTTGCCGACTCCATGCTTCCCGATCA-CTCCTTC-CCAGGTGACGTCGT-CACGACCAACTC-TCGCATTAAAATCACAAAGAATAATGAGTTTGTCTGCGTTGGGAACAACGGTGATGACA-----GTGTTCAGG-TCTTTATAAAACTTGTACTTGGTCTCAT---CTGGG-----TTGGTCATGGTGAG-GGCA-ATGGCATTGA--CAATGGCGA----TGTACTTCTGTCCA-TGAGAAAGA--GGGAGTCTCATCGTCAT----TC-GTCATTCACACCCCTTGGGGGA--C-CGTCCAA-CTTGCC-AATC-A-ATGTCGTCTTGACTGCAAAGT-CAACT-CCTGCC-TCTCTTCTCTCTTTGG-GTCCGC-GTCC--AATCCATAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCCTCT-CCTGCCAG--CCTG-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATACCTG--GCGAGTTCACTTGCAATGATTGCTGTGCGTCTCTAAGGTATCT-CTGACTCGTCCCTGTCAAGAAGCGTG-CGAACGTT-----CAGCAAGGGTCAGTGGTGTAATCCTTGTTTTCCTTTTTGAA-----TTTTTTCTTTCA-TTGTTTC--GACCGC--ATGTGTAG-GCCCCCCTCCAGTCGCGGTAAACTGGCTAGAGTAGGTAG--GGCAGGCAATGTT-TGG-GACA-CCTTTTCTAGTCCGCTCTTCATGCCATGGAGGTGAGCAGGG-CGTTCCTAAAGAGGGCTGCTCAGT-CGCCTAGACGGCTGCCGAAA-TCTACTGCTGCTCCGGTTCAGTGAATAGCGACCA------TATGGCCTGAGCCGCCCGT-GTGCAGGTTTGCGGCTACGACTACCAGTGTACTCACACCTG-TCGCTTCGTCGCTCGCCTGTCGCCACAGGACTATTGGGGATGAAGGGATGGTTTGAAGGATGATAAGATGACTTGCGCGATGACTTTGTTTAAAGTGA--AAAGAGTTGCGCATCTCG--TTGACTTCACTCTCTCGCCCAAAAACCATCTGGGTCCAGCAGCAGGACATGGTCGA-GACGGCTGGAGACGGAGGTGGA-TGCAGTGGATGACCGTGGC-TTCCTA-CGTG-TATCGAAAC--GCTCTCTGTG-CTT--CACGACGCG-TTGCTGGGAATCGCTTTTCT-GCCCGTTGAACCAGGTGCTTTCCTCCGCGCAGTCCACCGAAT-CCAGTCTTCACATGCTAGGGAGAC-AAACC--CT-AAAGCTGAGGATCGAAGATCCAGCA-GCATGCCAGCTGATC
gi|10                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCAG-TCCGTGTGCTTCCTTGTAGCTGTCCCTAGGCACTCCATGGCTGTGTTGTAC-ACAGTGTCACGGAGCGCAGC-CCACGTTGT-CTCAACATCCTGGCCTTC-CAGCATAAAGGAGTCTAAGCGTTGCTCC--AAGATGTCGGC-AAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATGTTCAGGCGTTTTGGCG----CT-----TTAATTCCCTGT----GGCC-GTCTTTTGGG---------CTG---------------GACGCGAATATTGAG-TTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTC-TTCGTGA--CTCGTATGTCTTGCCTGTCCTTCCTCC-TTA-CGATGACGTAGT-------------CGAT----------
gi|11                         :                                                                                                                                                                                                                          AG-GTTGTGTAG-AGATATC--G--A-T-GTTGTTCTATGCACTTTTC--CTGTA-GC-TAGCTGG-CGGTGAATATCAGGTCCGTTGTTCCTCGGC-TTG--TGCGGAAGCCATATTGA-C
gi|12                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      catgctgaagaattttggggctaggacacatccctgtttgaccctgtttgccactgaaaggttttggaaggctctccatcaacaaagactcggaccattatgtcatcatggaactggcggactatagtaatggacctacttggggagtcatacctttccgtcattttccagagtccatcacgactgactgtatcaaatgccttagtcaggtctacaaCTGT-TT--GCAAAGCCCTGAACCTACTTAGCT-GATTGCTCAGCCAGG-AGCTCTGCATCTCA-CGCAG-TTTTTGCTGGA-TAA---T-----ATAACGCATGTTCCTCA-A-TA------GTTTTTGG-GGGTGCTATTGA-CTTCGGT---TCG-TCAATGTG-TGTCTTGTAG--ACCTGA--TGGGGTTTTTTTC-CG--AAAAGTTGCTGCATTTTCCCGCAGTTTTC-GTCAAACCTG-TCCTTATGCTTCATGGTAGCAGGTCCTTAGCACTGCTTGGCTGTGTTGTAT-GCCGTTTC
gi|14                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       catgtcattcAACCACCTGG-TCCAGCG-CAGGACATGGTCGAAGCCGGC-GGA-ACGGAGTTGGGGTGCAGTGGATGACCGTGGCTTTCCTAACGTGTTCTCGACAC--GCTCTCTGCGGCTCGCCTCGCCGCAATTGCTGGGAATCGCCTTTCT-GCCCGTTGAACGAGGTGGTTTTCTCCGTGCAG-CCGCCGAATCCCAGTCTTCA-ATGCTAGG--GAC--AACCAACTAAAAGCTGAGGATCGAGG-TCCAGCAGGCATACCAGCTGTT
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                            TCTAGCCAA-GATCTTGCTTGCGATGGATAGCAGTGAGATTC-CGCGATGATTGTC--GC-AGACTTGGCGGTTTTCTTTGCACTTGTAGAG-GTGGATGATGGAG-GTGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGCTGCCAGATGAGCTGA-AACAGCTGG-TG-AAGTTT-CT-C-AATCAGTG-CCACACCTCCCTCCTTGTAGA-TTTCAGC-
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTAAAGTGA-AGAAGAGTTGCACA----GCGTCGATTTCACTCTCTCGTCC--GAGGCACCT------AGTAGCAGGAC-TA-TC----ATGATTTGCGATGG-GACGGT-TACGGTGGATG-CCTAGAATATTCTA-CGTGC-CTC--AACCTGCTCTTATCA-CTC--CATAGTGAG-TTGCT-GTAACTGCCTTTATCGCCCG-TGAAC
gi|17                         :                                                                                                                                                                                                          gacatgcgttgggaccAG-GTTGTGTA--AG--ATC--A-CGAT-GTTGTTCCATGCACTTTTC--CTGTAAGC-TGGCGGGGCGGCAAATAC-ATGTCCGTAGTTTCTC--C-CTG--CGCGGAAGCCACATTGAACTTTCAGGGAGGAGACCCTG-CTCAAGATGCCTCAGCAA-GCGAATT-AAGCAG
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ctacgaA-CTGAATTATGATGTCATGGCTTGTGTG-TCATTTGGATTATAGTGA-GGGAGACTTGCCCG----GAATCAATCCCACTCTCTCGTCC-TGAATCGTC-GGGTCCAGTGGCAGGACAGAGTCGA-GACTGTTGGGGACGAACCAGGA-TGCAG
gi|19                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCTGGACCAGGTGGTT-CCTCCGTGCAGTCCGCCGAAT-CCAGTCTTCACATGGCA-GGAAACAAAACC--CT-AAAGCTGAGGATCGAGGATCCAGCA-GCATACCAGCTGTTCg
gi|2                          :                                                                                                                                                                                                                     cctgTAGTGTTGAGTAG-AG--GTC--GGCG-T-TCTGCTCCTGACACTTT-C--CTGTA-GCCTGTCTAG-CAGCAAATACCATGTCGAATGTCCCGCGTT-CT---C-CGGAAACCACCATTG-CTCTCAGGTAGGAGGCCTTGGTTCGAGGTG-TTT-ATAAGGCG-GTT-GAGCAGAACTCTAGCCAA-GATCTTGCTTGCGATGGACAGCAGTGAGATTC-CGCGATGATTGTCCCGC-AAACTTGGCGGTTTCCTTTGCG--TGTAGAG-GTGGATGATGGTAAGCGTCCTTGAAGTCCTGT-GGCA-CTAG-TCTCGTGCTGC-AGATGAGCTGA-AATAGCT-G-TG-AAGTTT-CT-C-GATCAGGG-CCACACCTCCCTCTT---AGAATTTCAG--GG-GATGGAATCCGAACCAGGT-GAATTTTGCCTACGT-GAAAGTAGTCGGA-CT-----GCTTT-CTGAGATCTCATCC---AAGGTGGGTGGGGCGTCCATGGTCTTC--TTCGA-CA--GGG--TAC-TTGGGGTA--ACCTGTCGATAGC--ATCA---TCGTTGAT-G-GTG-G-AAGTCCTG-TTCAGGA--CGCT--GTCGAAATGTTCCCGGCCATCTCCT-CAAAA----CCTTCCCTTGTCGGTGATAA-GGGTTG-ACC--CCATCAGCACTGAG-GAGGGGAGACAGTGATCCTGAGGTAAGTA--GGG--CCAT-AGACTTTCCTTCAAACTGTC-GTA-GAA-----------GCGCTTCATGT-CGT-T-C-CTGTCT---GCAA-GCCCTGAATCTCGTCCGCTTTG-CACTCAACCAGG-AATCCTGCATCT-GGCGCAA-TTC--ACTT-A-TAG---TTGTGAGCT-CGTAC-TTCCTCATG-TG------TCTTTCTTTAGATGCT---GATCTTAGTG---TCG-TCGAGATGTAGCTTTGTAGC-GCACGAGACGC----TTTTTCTCACTAGCAGCTGCTGGATCTCTGTGCAGTTCTC-GTCAAACCAG-CCCTTGTGCTTCCTTGTAGCTGTCCCGAGGCACTCCATGGCTGTGTTGTACAACCGTGTCACGGAGCGCAACGCCACGCTGTCCTCAACATCCTGGCCTTCTCAGCACAAAGGAGTC-AGGCGTTGCTCTCAAAGATGTCGGCAAAAAGACTGCTTGATGTTGCTGACCTTCAGCTTG-CTGATG-TCAGACGTTTT--------TTTTAAATTCATTCCCTGCTGTTGGCCAGCGTTTTGGGCTTTTAATCCTGTGGCTCTTTTGGGATGACGCGAATATTGAGTTTTGGAGACAA-CGAGGCGGTGGTCTGTCCAGCACTC-TGCACCGCACATGGTCTTTCGTGA--CTCGTATGTCTTGCCTGTC---CCTCC-TTAGCGATGACGTAGTCAATGAAGAGATCCAAT----------GCTTTGAGCGGGGATGCATTCCATGGACGTCCTGTTACGAGTAGGGAGGTTGAAGACGGTGGTTGGTGAGATCAGAAGGTTGTGCTCTGGCGCAA-GTCTGGAGTAGTAGTAGAACTGTTGCTGTTGAAGTTGCCGACTCCATGCTT-CCGATCACCTCCTTCGCCAGGA-ACGCTGCACACGACCAACTC-TCGCGTT-AAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAG-GGTGATGACA-----GTGTTTAGA-TCTC--TAAAACTTGTCCTT-GTCTCAG---CT-GG-----TTGGTCATGGTGGG-GGCATTAGGCACTGA--CAATGGAGA----TGTAATTCTGCCCATTGAGAAAGGGTGGGAGTCTCATCGTCATAAGACG-ATCGTTCACACTC--TTTGGGA--C-C-GGCCAACTTGTC-GACCAATGT-CCGTCTTGACTGC-AAGC-CAACTCCCTGCCTTCTCTCCTCTCTTCGG-GTCCGC-GT-C--AATCCAAAA-AAGGTATATCCTGC-ACCTCTTTCACAA--AGTTCGCCTCTC-TCTGCCAGCTCT-G-GTTTCG-CTAAGCGCAGCGA--TGTCGATGTTATATCTG--GCGAGTTCTTTTGCAATGAGCGCTGTGCGTCTC-GGGGTCTCTCCTGACTCGTCCCTGTCAAGAAGCGTTGCGAACGTTCCAAGCGGCAAGGGTCAGTGGTGTAA-TCCTGTTTTCCTTTT--GAAGTTTTTCTTTC
gi|20                         :                                                                                                                                                                                                                                                                                                                                                                                       TAAGGCG-GTT-GAGCAGAACTCTAGCCAAAGATCTTGCTTGCGATGGACAGCAATGAGATTC-CGCGATGATTGTC--GC-AAACTTGGCGGTTTCCTTTGCGTTTGTgt
gi|21                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAGTTTACCCACACCTG-TCGCTTCGTCGCTCGCCTG
gi|3                          :                                                                                                                                                                                                                          AG-GTTGTGTAGCAG--ATCACGATG-TTGTTGTTCATGGCACTTTTTTTCTGCA-GC-T---TGG-CGGCGA-TATCAGGTCCGTAGTTCCTCGACGCTG--CGCGGAAGCCACATTGA-CTTTCAGGGAGGAAACCCTG-CTCAAGATG-CTCAGCAAG-CG-ATTTAAGCAGA-CACGGGCAAT-GATTTTG-TTGCTATTGACAG-GGAGATATTCTCTCG-TGATTGTC--AC-AGGACTGGCGATTCCCTTTGCGCTTGTAAAT-GTGAACAATCGTG-GTATTC-TGAACTCTTGCGGGTAGTT-GCTCTCG-ATTCCC--ATGACCTCATAAAAACT---TGTCAGTTGACTGCAGAT--GGGTTCGCACCT--GTCTTTGTAG--TCTCAGCAGG-GATGGCGTCGGGGCCGGG--AGCATTTTCACAC-T-G--CGTCATCTG--CTTGGTGGCTTTGCTGA-CTTTCTTCTTTAGGGGAGGGT----TGTCAA--GT-T-C--TT-GATTAACGC---CAC-CTGTGGTA--GGC-GGCAATTGT---TCA---TCATTGAT-C-GTA-GTTAGGGCGA-TTTGATA--CGCTAAATCGAA--GTT-TCGCCCATCTC-T-CAAGGATTTCCTTT--TTGTCTGTTGCAG-GGTTTT-ACCAAA-ATC-GCGCTGAGTAAAGGGAG-----GGTCCTGTTG-AC-TGT-GGGTTCCATCAGAC-T-GTTTCAGGGCATCCGTA-GAATTTCCTTC---GAG-T-CGTGTGCGT-CGGGC-GTATT--------CCTTGGATTTCTTCAGCTTAGGCACT-GAGCAGGCAATCCTGCATGA-G-CG-AG-TTC---CTGGACTGGACTT-----GCTGCGTTTG-----CA-GATGAAAGCAGCTTTTCTT---TACT---GG-CTTGAGGGATTCGTTTTTGGTG-AGGCTCGGAGCAGC-CGA--TG-----TTTCTC-CCTCAG-AAATG-TGGATCTTCATGTCGTTCTCAATCAAACAAGCTCCTGGTG
gi|3                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaTTAAGTTTGGCT-ATGTTGAG----CTTAGCGACAGCT-----TTT-TGCCCTGT----GGTT--TCCGCTGGG---------CTG---------------GATAAAGAGGTTCAT-TTTGGAGACGATCAAGACGATGATCCGTCCAGCAGTCCTGCACACAACATGGCC-TTTGTCAGTCTC-TGCGTCCTGCCTGTCCTTGGTCCAGTA---ATGACGTAGT-------------CAATAGGTGCCAGTGCTTTGATTGAGGGTGC-CTCCATGAAGGTT-TGTTTCGAGTTGGCAGCCGGAACATGGT-GTTGGT--GATGGTCAGGTCATG-TTT-GCGCAACATCT-GAGGAGGAGT----CCG-TGCTATTACATTTGCCTACTATATGTTTgtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtttaagtttggctatgttgagcttagcgacagctttttgccctgtggtttccgctgggctggataaagaggttcattttggagacgatcaagacgatgatccgtccagcagtcctgcacacaacatggcctttgtcagtctctgcgtcctgcctgtccttggtccagtaatgacgtagtcaataggtgccagtgctttgattgagggtgcctccatgaaggtttgtttcgagttggcagccggaacatggtgttggtgatggtcaggtcatgtttgcgcaacatctgaggaggagtccgtgctattacatttgcctactatatgtttttttccc
gi|4                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       atacttttccatgtttccagagttccatcacgactggctgtatcaaatgccttggtcagtctatcgaaggttgtgtagcagatcacgatgttgttgttcatggcactttttttctgcagcttggcggcgatatcaggtccgtagttcctcgacgctgcgcggaagccacattgactttcagggaggaaaccctgctcaagatgctcagcaagcgatttaagcagacacgggcaatgattttgttgctattgacagggagatattctctcgtgattgtcacaggactggcgattccctttgcgcttgtaaatgtgaacaatcgtggtattctgaactcttgcgggtagttgctctcgattcccatgacctcataaaaacttgtcagttgactgcagatgggttcgcacctgtctttgtagtctcagcagggatggcgtcggggccgggagcattttcacactgcgtcatctgcttggtggctttgctgactttcttctttaggggagggttgtcaagttcttgattaacgccacctgtggtaggcggcaattgttcatcattgatcgtagttagggcgatttgatacgctaaatcgaagtttcgcccatctctcaaggatttcctttttgtctgttgcagggttttaccaaaatcgcgctgagtaaagggagggtcctgttgactgtgggttccatcagactgtttcagggcatccgtagaatttccttcgagtcgtgtgcgtcgggcgtattccttggatttcttcagcttaggcactgagcaggcaatcctgcatgagcgagttcctggactggacttgctgcgtttgcagatgaaagcagcttttctttactggcttgagggattcgtttttggtgaggctcggagcagccgatgtttctccctcagaaatgtggatcttcatgtcgttctcaatcaaacaagctcctggtggtgtctcactctgtttagggcgaccgaggatctcacggcagcagcgtgaacgtggtccctaaaggacgccccttttcttcgacactgttcataaactggctgtagatccttgagatttgctgtccagcttcactgcaacacttcttcagcaatttgagggagtCAACGCGTGGCATTAAAATCACCACGAA--AT-AGTTTATCAGACTTGGGAATAG--ATGA--ACAAGGGAGTG---AGCCTCCTCGTAAGAACTGTCTTTAGTTTCCTTTCCTCGGAGGTTTTGTTCATGTTGGAAGGCA-TAGAC-CTGGATCAGAGGTGACATTTGTCTTACGGTCCA-C-----AGG--AGGAGCTGCATCTTCATAC-CCT-ATCATTAAGAC----TCAGGAATGC-TTTGCAAGCTTTTCTGGAC-ATGTGTTGTTTTGA-TGCGAAAC-CCACT-CCTGAC-TCGCGTCGCTCTTCGCTGCTTGC-GCCC--ACTCCAAAG-AAGGTGTAACC-GC-TTCCCCATCTCAGTTAATTGGCCTTTTGTCTGCAAG--CG-A-GTTTCAACTAAGAGTCGCAAATCATCGATCTTGTATTTTTTGCCAGTTCCTTTGCTACTAGTGC-GTTCGTCTCTCTGGCCTAT-CTT-TTTGGTGTTGTCAGTAA-CGTT-CTGACGTTTC---CA-TGATGCTAGGTGA-GCAAACCTT----TGCTTTT---A-----TTCTTTCT---AAGTATTTCGAGACCGCCAAAGGG--GTGATCTCCGCCAGCTGCG-TATGCTTAC-AGGGTGG-TAGTAGGCAGGCTAT-TTATAGTGGCAACCTTTCTTAGCCCGTTCCTCAAGCTGTGGAGGCGAGCAGAGTCGATCCAAAAGAGGACTGCTCCGTTCACTCACGAGGCTGCCG-GGCTCCATCG-TGCCTTGGTTCAATGAAGGACGACCA------CTTGTCCTGAGCCG-CTGTGGTGCAGGTTCGCGTCTACCGCTCCCAGTGTATCCTCAGCTACTTTCTTCGCCGCTT-CCCATCGCCACAGGAC--TT--GAAT---AGGATGA-CTGGATG-TGATGTATCGACTTGCG-G-TGACTTGGATTATAGTGAGGGGAGACTTGCGCA----GAATCGGCCTCACTCTCTCGT-C-TGAATCGCC-GGGTCCAGTGGCAAGACAGAGTC-C-GACGG-TGGAGA--GAATCAGA-TGCttttccc
gi|5                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          cattccagacatggtagtcggcaCTGTCTTCAGTTTCCT---CAAGG-----TTCGTCCTTGTTGT-AGCA-TATACACTGA--TCAGGGTGACATTTGTCTTGCT-TCCA-------AAG--GGGAGCTTTATCTTCATAA-TCCTATCACTAAGACCT--TCAGGAA--TGCTTGTAAGCTT-CT-GGAC-ATGTGTTGTTTCGATGGAGAAACACAA-T-CCTGAC-TCGTGTCGCTCTTCG----CTGCTGTTCTCACTCCAAAAGAACATGTAACC-GCTACCA--TTCTCAATTAATTGGCCTTTG-TCTGCAAA--GC-GAGTTTCA-CTAAGAGCTGCAA--TATTAATCTTGTATCTG--GCCAGTTCCCTTGCCACTACTTCAGTTCATCTCTCTGGCCTTT-CTGCTTTGGTGTTATCAAGTAACATT-CTAACGTTCC-----ATGATGCTAAGGTGCGCAA-CTTTGTCGTC--------------TTCTTTCT---A-GTATTTCGA--CTGCTAAAAGG--G-GATCCCCGCCAGCTGCAGTATGCTAACCAGGGTGGATTA-AAACAGGCTAT-TT-TAG-GGCA-CCTTTTCTAACCCCGTCCTCATGCTCTGGAGGCGAATAGAG-CGATCCTAAAGAGGACTGTTCGGT-CACTCAGGAGGCTGCCG-GG---CACCATTGTCTTGGTCCAATAAAGGACGATCACTTAAGCTTGTCCTAAACCGCCCAT-GCGTAGGGTCGCAACTACAACTCCCAGTGTATCCTAACCCA-CTGCTTTGCCGCTTCAACATCGCGACAGGGC--TTAGA------AGGATGA-CTGAATGGTGATGTCATGACCTGCGCG-TGACTTGGATTATAGTGA-GTGAAACTTGCGCA----GAATCGACATCACTCTCTCGTCC-TGAATTGCC-GGATCCAGTGACA-----------A-GACAGCTGGAGACGATCAAAGA-TGCAGcagc
gi|6                          :                                                                                                                                                                                                                           g-GTCATGTAG-AG--ATC--GCAG-T-GCTGCTCTTGGTATTTCTC--CTGGA-GT-TGGCGCG-CAGCAAATATCATGTCCGCTGTCCCACGTT-CGG--CGCGGAAGTCGCACTGG-CTTTCTGGGAGGAGTCTTTT-TTCAAGGTG-TTGGATTAGACG-GTT-TAGCAGTACACGAGTCAG-TATCTTCCCAGCTATGGACTGGAGGGAGATGC-CTCTGCGATTATT--GCAAGAC-TGACGGTTTCCTTTCCTCTTGTAGAT-GTCGACAACGCTG-GCATCCTTGAACTGTTGT-GGGA-CT-T-TTTCCTCGTGCCACTTGGGTT----------------AGATTT-CT-G-TATTATGA--CGTGCCTCCTGCCTTGTACA-CTTCTGC-AGTGATAG
gi|7                          : gctgaagagggtcggagccagcatgcagcactgttttacaccgtttgtcactgtgaaggcatctgactcgtctccatcatctagtaccttcaccatcatgccattgtggaaatgtcgaacaaacgtggtaaacttgctggggcagccgaatttttctatgatcttccataagccctccctgctgaccgtgtcaaaggcctttcagatcgacaaatATAG-GTGGAGTAG-AG--GTA--GGCG-T-TCTGCTCCTGACACTT-----CTGTA-GC-TGTCTAG-CAGCAAATACCATGTCGATAGTCCCGCGTT-TTTTTC-CGGAAACCACACTGG-CTCTCAGGTAAGAGGTCTTG-CTCGAGGTG-CGCGATAAGGCG-GTT-GAGCAGAATTCTATTCAA-GATCTTGCTTGCGATGGACAACAGTGAGATTC-CGCGATGATTGTT--GT-AGACTTGGCTGTTTCCTTTGCGCTTGTAGAG-GTGGATGATGGAG-GCGTCCTTGAAGTCCTGT-GGCA-CT-G-TCTCGTGTTGCCAGATGGGCTGA-AACACCTCG-TG-AACTTT-CT-C-GATCAGGG-CCACATCTCCCTCCTTGTAGA-TTTAAACTGG-AATGGAATCCGAA----------------CCAC-TGGAAAGTAGTCGGA-CT-----GCTTT-CTGA-ATCTCATCC---AAGGTGGGTAGGGCGTCTATGGTCT-C--TTCTA-CA--GG---GAC-TTGGGGTA--GCCTGTCGATGGC--ATCA---TCGTTGAT-G-GTG-G-AAGTTCTG-TTCAGGA--TGCT--TTTAAAATGTT-CCGCCCATCTC-TGCAAAA----CTGTT--TTGTCGGTGATAA-GAGTTG-ACC--C-ATCAGCACTGAG-GAGGGGAGACAGTAATCCTGAGGTAG-TA--GGA--CCAA-AGACTT-CCTTCAActttgccacaggagagttgctttacagtctttttgactgcttcttcagtgaggaggttgtccagtttttgct
gi|8                          :                                                                                                                                                                                                                       gacAG-GCTGTGTAG-AT--ATC--A-CGAT-GCAGTTCCATACAGTTTGC--CTGTA-GC-TGACAGG-CGGAAAATATCATGTCCCTTGTTCCTCAAC-CTG--CGCCGAAGCCATATTGG-CTTCCATCGAGGAGACCCTG-CTCAAGATA-CTTCAGCAAGCG-ATT-AAGTAGAACACGGGCAAG-GATTTTGTCTGCTATTGGTAGGAGGGATATCT-CTCGGTGATT-TC--AC-AGGACTAGC--TT---TTTGCGTTTGT-GAGTGTGG
gi|8                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ctacga-TTTCAGCAGG-GATGGCGTCAGGGCCGGG--AGT--TTCCCCAT-T-GA------TC--ATCT-----GGTTT-CT----TCT--TCA---GAGG-G---AGGGTTTTCGAGTTCT-TAGTTTAA-T---GT---CGC-TTACGAAAG-GCCTGT-GGTTGC--TTCA---TCATTAATCG-CTG-C-AGG--ATGATTGAGTA--CGTT--ATCGAAGTGTTttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggttttcagcagggatggcgtcagggccgggagtttccccattgatcatctggtttcttcttcagagggagggttttcgagttcttagtttaatgtcgcttacgaaaggcctgtggttgcttcatcattaatcgctgcaggatgattgagtacgttatcgaagtgtt
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ctacgaaggctgtgtagatatcacgatgcagttccatacagtttgcctgtagctgacaggcggaaaatatcatgtcccttgttcctcaacctgcgccgaagccatattggcttccatcgaggagaccctgctcaagatacttcagcaagcgattaagtagaacacgggcaaggattttgtctgctattggtaggagggatatctctcggtgatttcacaggactagctttttgcgtttgtgagtgtggttaatctgaactctcgaggtagttgctcttgattccacatgacctcataaagactgcagacgggtGCTCT-GCGCAA-GTCTGGAGTAGTAGTAG-ACTGTTGCTGTTGAAGTTGCCGACTCCATGCTTCCCGATCAC-TCCTTC-CCAGGAGACGCTGC-CACGACCAACTC-TCGCGTTAAAATCACCAAGAATGATGAGTTTGTCAGCGTTGGGAACAGCGGTGATGACA-----GTGTTTA
gi|9                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    C-GACC-A-ATGTCGTCTTGACTGCAAAGC-CAACT-CCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgaccaatgtcgtcttgactgcaaagccaactcc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|13 ): GCTGTACTGCTCTCAGCCTTTGGGAGGATCTGACTCGTTTTCATCAAGACCCCCAGTAACCCCCCCCCATTCCACCACTGCATGCCATTGGGGTAACTGGGCTATGCCAGAGCAAGACAAAACTTGCTGATGCAACCAAATCTTCCTTAACCAAAAATCCGCCGAACTTCTAGCCAAGTGACGGCCAATACTTTTCCAATGGTTCACTTGTTGACCTCGGTCCGAAGGCCTTTGCCACAAATCGACAAAGGTCATAAGTAGCAGGTCACAGTG