lowQualScore : 1111111111111111111111111111 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1111111111111111111111111111111111111111111
lowQualScore : 1 1111 111 1 1 2222222 4444444444444444444 333333333333 11111111111 1111 7777777 111 111 222222222 222222 111 1111 1111 111111111 2222222 2222222222222 11 222 111 1111 111 1111 222 1 3333 666666666666666666666666666666666666666666666 1111 1 0000000000000000000000000000 1111 22222 2222 1 11111 222 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 33333333333333 1111 444444444444444444444444444 1 111 11 11 1 111 111 22222 333 111 2 11 111 333333333333 11 1 11 1 11 6666666 333333333 1 111 33333333 111 33333333333 11 11 1 22222 1 1 11 88888888888888888 11 1 22222 1 1 22 1 8888888888888 222 1 22222222 11 999999999999 11 11 1 88888888888888888 1 1 111 4444 1 11 11 11 1 1 3 1 11 77777777777777 4444 11 222 333 1 11 2 22 1 44444444 1 22 33333 111 4444444444444444444444444444444444444444444 2222 6666666 33333
lowQualScore : 3 3 3 4 9 66 3 5 5 1 5 7777 5 000 5 5 1 99999 5 1 5 5 4 1 3 99 6 99 5555555 3333333333333333333 6 1 444444444444 99 3 99 6 6 99999999999 6 6 6 3333 99 6 9999999 2 6 111 6 99 99 99 111 5 5 5 222222222 222222 000 5 2222 77 4 4 4 4 4 4 66 2 66 2 4 4 1 4 4 4 777 7777 888888888 4 66 4 0000000 4 9999999999999 66 7 55 777 444 4 5 5 1 55 6 000 2222 77 777 77 5555 000 5 0 5 9999 5 5 5 77 5 5 77 3 77 5 5 444444444444444444444444444444444444444444444 777 555 2222 5 1 5 8888888888888888888888888888 6 6666 3 6 6 11111 8888 5 2 5 22222 6 222 0 0 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 44444444444444 6 7777 555555555555555555555555555 0 111 3 33 1 11 8 6 8 111 8 8 8 444 8 8 99999 3 888 0 777 0 33 666 777777777777 5 6 33 0 33 0 33 3 1111111 444444444 2 0 666 0 11111111 1 8 8 8 6 8 8 8 8 111 00000000000 1 11 1 8 6 8 33 0 44444 0 2 0 66 0 22222222222222222 88 3 88888 3 5 22 2 4 5555555555555 999 8 7 3 11111111 44 000000000000 2 88 3 2 2 99 0 3 88888888888888888 0 0 444 3 1111 4 9 0 2 88 22 00 2 88 0 0 3 2 1 3 44 88888888888888 7 0000 44 333 333 5 3 88 0 4 66 22 6 6 7 4 22222222 3 55 33333 8 999 4444444444444444444444444444444444444444444 7 8888 1111111 55555
lowQualScore : . . . . . .. . . . . . .... . ... . . . ..... . . . . . . . .. . .. ....... ................... . . ............ .. . .. . . ........... . . . .... .. . ....... . . ... . .. .. .. ... . . . ......... ...... ... . .... .. . . . . . . .. . .. . . . . . . . ... .... ......... . .. . ....... . ............. .. . .. ... ... . . . . .. . ... .... .. ... .. .... ... . . . .... . . . .. . . .. . .. . . ............................................. ... ... .... . . . ............................ . .... . . . ..... .... . . . ..... . ... . . .................................................................................................................................. .............. . .... ........................... . ... . .. . .. . . . ... . . . ... . . ..... . ... . ... . .. ... ............ . . .. . .. . .. . ....... ......... . . ... . ........ . . . . . . . . . ... ........... . .. . . . . .. . ..... . . . .. . ................. .. . ..... . . .. . . ............. ... . . . ........ .. ............ . .. . . . .. . . ................. . . ... . .... . . . . .. .. .. . .. . . . . . . .. .............. . .... .. ... ... . . .. . . .. .. . . . . ........ . .. ..... . ... ........................................... . .... ....... .....
lowQualScore : 3 3 3 4 8 11 4 0 7 4 7 9999 7 000 7 7 7 33333 7 4 7 7 1 4 3 22 7 22 8888888 5555555555555555555 7 0 222222222222 22 5 22 7 7 55555555555 7 7 7 5555 22 7 2222222 5 7 777 7 22 22 22 777 7 7 7 999999999 111111 000 7 1111 99 4 4 4 4 4 4 11 4 11 3 0 0 6 0 0 4 888 2222 444444444 4 11 4 6666666 4 4444444444444 99 2 22 000 222 4 0 0 4 00 7 222 1111 99 999 99 3333 000 0 1 4 2222 7 1 7 99 7 4 99 2 99 7 7 222222222222222222222222222222222222222222222 888 555 1111 7 4 0 5555555555555555555555555555 7 2222 2 7 7 33333 5555 7 9 7 00000 0 000 8 8 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 88888888888888 5 8888 222222222222222222222222222 0 000 2 88 4 00 0 0 0 888 0 0 0 000 0 0 44444 2 888 8 555 0 22 000 000000000000 0 0 88 0 22 0 22 2 0000000 777777777 0 0 000 8 22222222 0 0 0 0 0 0 0 0 0 888 44444444444 8 22 0 0 0 0 22 0 55555 0 5 0 00 2 77777777777777777 33 3 77777 3 0 00 0 7 7777777777777 000 3 3 3 77777777 33 000000000000 5 88 2 2 5 22 0 2 88888888888888888 0 0 000 2 8888 5 8 0 5 88 55 22 5 22 0 0 5 3 0 3 33 33333333333333 3 7777 77 333 555 5 0 55 0 0 00 55 0 0 0 0 77777777 3 33 33333 3 333 3333333333333333333333333333333333333333333 3 3333 0000000 77777
consensus : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATGTATA---TA-CTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATTAT--ATA-G-AAAATA-AC--G-----GTA-ACTGACT-T-T--T-TT--GTTG-TATAATT---TCAGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAA-AT-ATT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATGTC----AAA-G-TTT--GA-T-------AAAAA-C-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA--TAAATATT-CGCGA-CGTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGA--A-C--AGCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCACA-TCAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-AC-TCGCC--GC--TA--CA--TGT---A----------TAT-----------ATGA--TCGC-AGTA----A-CAATAGATAA-TATAATA----TATAA-A--AATTAA-AT-AATAATT-T--A-TAAT-ATT-TG-AATCCCATCAAA-NTT-ATTTGTTT-TAAAGAT-TACATAGTCTA---GTCATGTATCTATA-TTC-T--TAACCAAAAAGA---------ANGAGTTGTTT-T------TTTTTCT------ATT--TTGACGATA------------CA--TT-GGAGG-CC--CCTCTTCC-AA-AA-TCACTG-----AAAAC---G-TTTTTAA-AACAACGCAGTTCAA--A-TAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTTTGT-CT--AAT-TT-TC-ACAAT---T-T-CGA--CACANTTCCTAAT-CCTGTTG---CGTTATAGCAG-TCTTA--GAGT----ACA--AC-ATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-T-AACCTTCATGTCA-ATAAAA--GAAAAAAAAGTGT-GN-TAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAA--TTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAANCTGAAT-G-CAAATGCGTTCAACGCA-AA---ATATTTC-C--AAA--TCCAC-GATTC-TC--TCA-ACA-ATAAANGCTATCTNAAGTA---GTAA-G---GAGTGGGGG-AAAGATATTAGTTTTA-TT-TACTG--AGTGATTCT---CTC------GTCCAATT-TTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---CCTCTAGAA-AAA-G-C-GCATGAACC-NCGCATTTTTAA-GCGCACTGAGAAAGT-GAA-NAAACG-TGCACGCC-GAAACAAT-GTNCACTCA-ACGCCCCC-CCCC-CCC-C----GCC-TC--TTTTTAATTGATCTCTT--CATGGTATCCA---TTTTTTACTCAATTNCATTTTACTTCGTTAAAANTNNAGCTGTNTTCGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTACTAAATTAAAATNATG-----A--AAA-GAAA-GAAAG-----AAAAATTTGTAAA-ACACG--CGCTG--------TT-CC----TCT-GTATA-------TGTGTCTGTATTCAAAAT----ACATATA---AA--AAGC----TATCACTTCATT
Reference ( gi|3 ) : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCCC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATGTATA---TA-CTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTTGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATTAT--ATA-G-AAAATA-AT--G-----GTA-ACTGACT-T-T--T-TT--GTTG-TATAATTCGATCAGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAA-AT-ATT-G-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AC-AAAGATGTT----AAT-G-TTT--GA-T-------AAAAA-C-----------T-GTCAC--AGCAGCAGTTTTTT-AAATG-A-CGTTA--AAAATATT-CGCGA-CGTCATTGAACGACGTTATTCATTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGA--A-T--AGCGTTATTAACGCCCTGCAT---TAAAATGAAATTCGAATACTCATTAAAAACCC-CCACA-TCAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-AC-TCGCC--GC--TA--CA--TGT---A----------TAT-----------ATGA--TCAC-AGTA----A-CAATAGATAA-TATGATACTTGTATAA-AGGAATTAA-A--AATAATT-T--A-TAAT-ATT-TG-AATCCCATCAAA-A-T-ATATGTTT-TAAAGAT-TACATAGTCCA---GTCATGTATCTATA-TTCAT--TAACC-AAAAGA---------ACGAG-------T------TTTTTCT------ATT--TTGACG---------------CA--T------------CCTCTTCC-AA-AA-TCA--------AAAAC---G-TTTTTAACAACAACGCAGTTCAA--A-AAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TG-TTTTGT-CT--AAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAATACTTGTTG---CGTTATAG-AG-TCTTA--AAGT----AC---AC-ATGAGCAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACTCGGAACCAAACGCTACG-TGAACTTCCATGTCA-ATAAAA--AAAAAAAAACTGT-GT-TAATAA-A-GTT-ATCGC-A-TCCG-ATG-TTTT--ACAAA--TTCGTA-TTTTTTTTATACAT-GTAATTCAGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-TAAATGCGTTCAACGCA-ATCTTATATTT--A--AAA--TCCAC-GATTC-TT--TCA-ACACATAAAAACTATCTAAAGTACTTGTAATG-ATGAGTGGGGG-AAAGAAATTAGTTTTA-TT-TGCTG--AGTTATTCT---C--------GTCCAATG-TTCAAATTGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTACGTTCCTCTAGAA-AAA-G-C-GCATGAA---ACACATTTTTAA-GCGCACTGAGAAAAG-GAA-GAAACG-TGCATACC-GAAACAAT-GTTCACTCATATACCCCC-CCCC-TCC-CTTG-GCCTTCTTTTTTTAATTGATCTCTT--AATGGTATCCA---TTTTC--CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTATAATTATG-----A--AAA-GAAA-GAAAG-----AAATATTTGTACA-ACAC---CACTG--------TTTCC----TCA-GTATT-------TGTGTCTGTATTCAAAAT----ACATATA---A---AAGC----TATCACTTCATT
gi|1 : ACGTAGGG-C-GCGGGTTTA-CGGGACCTTCTC--GAAA-CCCCTCC-CG-AAAATTTTGACA-GAGGAGATTATTCTTGACAATGTATA---TA-CTACGGT-TTAAAAAATT-ATT-TTTCGATAA--CAG-CACCGTTTTT--AGTAAT--ACGTCGTA--AA-CATTTAC------CATTGCTTTAATAG----CACG-C---------GAT-ACTGTATGCCG------------TTGA---TTATTTATA-GGAAAATATAC--G-----GTG-ACTGACT-T-T--T-TC--TTGG-TATAATTC----AGCTTAAAA-TG---G-A--GAGAATGTGGTTTGCT--GT---TCTT-CTTGATGA-TGATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-T---GAAA-AT-ATTTG-A--TGCAAAAA--A-T-T-ATGGGGTCAG-TC-AGCT-CGTTTTTTGAGTGAA-A--AAAGATGCTC---AAT-G-TTT--GA-T-------AAAAA-C-----------C-GTCACC-AGTAGCTGTTTTTTTAAATGGA-CGTAATTAAATTATT-CGCGA-CGTCAT-GAACGACGTGATTCATTTACTTTTCATTGCCGTTTCTTC----AAAACATCAC---AGA--A-C--AGCGT-ATCA-CGCCCTGCAT---TAAAAGGAAGT--GAATACGCATAAAAAAAAAACCACA-TCAATTTAATTAATTATA--AGATATCAAGGAAA-ATGTT-GTTGAAATTTTCTGTCGAAAGTTGGTAGATTTTAC-TCGCC--GC--TATACA--TGT--------------TATT----------ATGGATTCGCTAGTA----AACAATAGATAA-T--GGTATT---ATGA-AT-AATTAA-A----TAATT-TTTA-TAATCATTCTGTAA--CCATCAT----T-ATTTGTTT-TAAAAAT--ACATTGTCTAA--GTCATGTATCTATAATTC----TAACC-AAAAGA---------CAGAGGTGT---T------TTTTTCT------ATT--T-GACGATA------------CA--TTAGAAGATCCA-CCTCTCTC-AA-TT-TTA--------AAAA-----------AA-AACAATG---TTCAA--A-TATAGAGAT-AAGTG--TGTGAGAGGTTGG-AATGC-A-GATTCACTTGAAAC--TTTT--GT-TGTTTTTGT-CT--AAT-TTCTC-ACAAT---T-T-CGA--C-CAAGTCCTAATTC-TATTG---CGTTATAGTAG--CTTA--GAGT----ACAG-AC-ATGTGTAGT--CCA-TCAACGGA-CATT-C--TGTTGGAAAT---GGACCAAACGCTA---------TCCATGCCA-ATAAAA--GAAAAAAAA-TGT-GT-TAATAA-A-GTTAACCGC-A-TCCG-ATGTTTTT--ACAAAGGTTC---------TTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----ACTTTACTTTAATTCTAACCTGAATGG-CAAATGCGTTCAACGCA-A----ATATTTC-C--AAACTTCCACGGATTCGTC--TCACACAAATTAATGCTATCTTAAGT--------------AGTGGGAG-GAAGATATTAGTTTTATTT-TACTAATAATT-TTCTCAGC--------GT-CAATT-TTC-AATCGCCACGTAGTGCACGTTGGTTC-TAGTTTTCAAAAAT-G-AAGCGTG----CCTCTAGAA-AAAGG-C-GC-TGAACC-GCCCA-TTTTAA-GCGCA-TGAGAAAGT-GAA-TAAGCGATGCACGCC-GAAACAATAGTGCACTCA-ACACCCCC-CCCC-CCCGC----GCCATC--TTTTGAATTG--CTCC----ATGGTA-CCATTTTTTTT--TTCAATTGCA--TTACTTCGTTAAAATTTGAGCTG-GTTCGAATT
gi|13 : taACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGA----TAT-CTTGACAATATATA---TA-CTACTGT-GT-ACAT-TT-TTT-TTTCGATAAA-CAG-CACCG--TTTTTAGTAATT-ACGTTGTA--AA-CAT--AT------CATTGTATTAACAGTGCTCA-G-C---------AAG-ACTGCTTTCCA------------TTGG--ATTAT--ATA-G-AAAATA-AC--G-----ATA-ATTAATT-T-T--TGTT--GTTG-TATAAT----TCAGCTTAAAA-TG---G-A--GAGAATTTGCT--GCT--GT---TCTT-CTTGATGA-T-ATC---------TATAT------C-TAA---CA---------AA--AAACAAT-TT-GAAAATAT--TT-G-A--TGC-AAAA--AAT-T-AT-GGGT-AG-TCGAGCT-CGTTTTT---ATGAA-TA-AAAGATGTC----AAA-G-TTT--GA-TAAAAAAAAAAAA-CCAAAAAAAACAC-GTCAC--AGCAGCTGTTTTatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaaattatgtaagaaaaagaaaagaaagaaaaatttgtgaatacacgcactgttcctctgttatgtgtctgtattcaaatacatataaataagcatcacttcattggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|35 : taACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--
gi|21 : tttaACGTAGGT-C-GCGGGTTTG-C
gi|15 : caaatattttcccatcggaatcgaaaggaagcaaaattaaatgaaacatattcatatcggtaaaaaattgaaatctttattatctatgcacaacataaaggcaattgttacgtcacaattgaaagtacacagaaaaagacgtcgagtcgtaagatttgcgtaccccaaagccgtgacgtagACGTAGGT-C-GCGGGTTTG-Ctaaactataaat
gi|11 : tctaaagtgctatgagtctcctggcctaattttctgtaaagtttgggtggacatgtcagaataaaagggatgaaacgtgaactatctcaagttttgcattggaaacgaaaggaagacattcgaaatgaaacgaaaccttaatatacctcagtatgttaaagcagctgtagttaatactcataattaatatcggtaattttttacgctctttatcatcagtcaatactatcaacgcaatcgttacgtcaccatgaaatgtacacgaaaaaagacgtcgagtcgtaagaaatgcgtaccccaaaaccgtgacgtagACGTAGGT-C-GCGGGTTTG-Cta
gi|5 : ccatttggtcctgaagaaattttagagtgtccgctacatacgcgtcaaactttctgaataaaacttaaaagtgcatggatctcctgcctaaattttctgctaaagttgtcagcctgtcttcgctttcccccaaaattgtccgcttttagacttcataaaattaaagggactggaaacgcgttatctcaaaagttttgcatcggaaaacgaaaggcgaagacttacaaacttaaatgaaacctgatatcaccttcaatatggtaaaagcagctgttgttaatagttcataattgagtatcatcggtaattttaatttttacgcctcctttctatcaacgcaattgacgtcacaatgaaatgtacacacgaaccaaaagattcgacgcgttagattttgcgttaccccaaaatcgctgacgtagCGTAGGT-CCGCGGGTTTAACGG-ACTTTC-----GAAACCCCTC--TG-AAATATT-GACA-GAGGG---TA--CTTGACAATGTATAATATA-CTACTGT-GTTAAAA-TTTATTATTTCGA--AA-CAGGCACCGCTTTTTTAGTAATTCACGTCATA--AAACAT--AC-------ATTGTTTTAAC-G----CA-G-C---------GAG-ACTGTTTCC--------------TTGA--ATT-T--ATATG-TAAATA-GTAAG-----GTG-ACTGACT-T-T--TACT--GTTGATAT-------TCAGCTTAAAA-TG---G-ACAGAGAATTGGTT--GCT--GT---TCTTACTTGATGA-T-ATG---------CATAT------AAAAA---CA-AAA----CAACAAAACAAT-TT-GGAAA-CT-ATT-GCA--TGCAAAAA--A-T-T-ATGGGGT--G-TCGAGCT--GTTTTT---ATGAA-ATTAAAGATGTC----AAAAG-TTTTGGA-T-------AAAAA-C-----------C-GTCCT--AGCAGCTGTTTTTT-CAATG-G-AGTTA--TAAA-ATT-CTCGACCGTCACTG-ACGA---TATTCA--TACTC----T-G-C-TTTCTTC----AA--AAACAC---ACACCA-TGAAG-GTTATTAACGCCCTG--T---TAAAAGGAAATCTTGATACTCATTAAAAA-AC-CCACATTCAATATA-TCAT---TA--AAATATCAAGGAAATATA-TTG-TGAAATTTC--GTCGA---T--GT-GA-TT-AC-TCGCC--GC--TA--TACTTGT---A----------CAT-----------TTG----TAT-AGTAGTTCG-CAGTA-------ATTATA-----ATAG-ATGAATTAA-AT-AAT-GTT-T--A-TAAT-TTC-TG----TCCATCAAATT-T-ATTTGTTTATAAAATT-TACAAAGTCTA---GTCATG-GTCTA-A-T---T--TAACCAAAAAGA---------GAGAGTTGGTT-T------TTTTTCT------A-T--TTGACGATA------------CA--TTTAGAAGATCCACCTC-TCC-AATAA-TTACCGGTAATAAAACTCTT-TTTTTAA-AACAA-GCAGATCAA--ATTAT---TAA-TAATA--TTT---AGCTTGG-AATGCAA-GATTCAC-TGAAACTATTAT--GCATGTTTTTGTGCT---AT-TT-TT-ACAAT---TAT-CGA--C-CATTTCCTAAT-CCTGGTG---CGTTATAGCAGCTCTTA--GAGTAAGGAC---A--ATGGGTAGT--CCATTCCACGG--CATT-CA-TGTTGGAAtataaatcataaagtcgcaa
gi|27 : CGTAGGT-C-GCGGGTATA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----CAT-CTTGACAATGTATA---TA-CTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCG-TTTTTTAGTctagacca
gi|9 : GTAGGTGC-GCGGGTTTA--GG-ACCTTCTC--GAAACCCCGTCCCTA-AAAATTT-GACATGGGG----TAT-CTTGACAATGTATA---TA-CTACTGTTGTAAAA--TT-ATT-TTTCGATAAAACAG-CAGCCTTTTTTTAGTTATT-AC-TTGTAGAAA-CAT--AC-------ATTGTTTTAACAG----CA-G-CAGTACCATTGAGGACTGTGTTTCGCGAGTGTGTGGGTGGAGGATTAT--ATA-G-AAAATA-AC--GTGTGTGTA-ACTGACTGTGT--T-TT--GTTG-TATA--T---TCAGCTTAAAAGTG---GGA--GTGAATTTGGT--GCT--GT---G-TT-CTTTATGACT-ATT---------CATATT-----CAAAA---CG-AAA----ACA--AAACAAT-TTTGAAAA-AT-ATT-G-A--TCCGAAAAACAATGT-ATTGGG--AGTTCGAGCT-CGTTTTT---ATGAATAT-AAAGATGTC----AAA-GTTTT--GA-TAA-----AAAAA-C-----------T-CTCGCTGAGCAGCAG-TTTTT-AAATG-ATCGTTAT-TGAATATT-CGC
gi|12 : aaGTAG-T-C-GCGG-TTT--CGG-AGCTTCTCATGATATACCCTCC-TATAAAATTTTGCCA-GGGG----TAT-CT-GACAATG-ATA---TATCTACTGT-GTATAAA-TA-ATT-TTTCGATAAA-TAG-CACCG---TTTTAGTTATTAACGTTGTA--AC-AAT--AC------CATTGTTTT-ACAGTCA-CA-GACCTATG----GAG-ACTGATTT-CA------------TT-A--ATTTT--ATA-G-AAAATA-AC--G-----GTACACTGACT-T-TTCT-TT--TTTG-TTTGGT---AT-AGCTT-AAA-TGGTCG-A--GA-AATTTGGT--GCTAGGTGTATCTT-CT--ATCA-T--TTAGCGTCAGGCATATGCGCGATAAGAGACCGTAAACGACCAG--AAACCATGCT-AAACA-ATCATT-G-GATTGCCAAAA--AAT-TAATGGGGA-TG-CCGAGCTCCGTTTTT---ATGAA-AT-AAGCATGTTCCAGAGT-G--TT--GACT-------AAAAACC-----------T-GTCatggttttcaattgtctttcattaccatttattagaccatc
gi|7 : aaTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----TAT-CTTGACAATGTATA---TA-CTACTGT-GTAAAAA-----------------A-CAG-CACCGTTTTTT-AGTAATT-ACGTTGTA--AA-CAT--ACATGTACCATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATTAT--ATA-G-AAAATA-AC--G-----GTA-ACTGACT-T-T--T-TTTTGTTG-TATA--T---TCAGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-ACA----CAA--A-----------------T-ATT-G-A--TGCAAAAA--AGT-T----GGGT-AG-TCGAGTT-CGTTTTT---ATGAA-AT-AAAGATGTC----AA--A-TTT--GA-T-------AAAAA-C-----------CGGTCACA-AACAGCATTTTTTT-TAATG-A-CGTTA--TGAATATT-CGCGA-CGTTAT------------TTCGTTTAC-TTTCAT-GCT-TTTTCTCAAAAAA--CATCACAA-AGA--A-C--AGCGTTATTAACGCCGTGCATTAATAAAAGGAAATTCGAATATTC-CTAAAAAg
gi|34 : TAGGT-C-GCGGGTTTA-CAG-ACCTTCTC--GAAAA-CCCTCC-Taaaaaaaaaaaaaaacaacaaacaacaacaaaaaaacaaaacatcaatttattattgataaaacatcaaggaaaatgttagttgaaatttcgccgctatacatgtacattatcacagtatgatcgcattaacaatggataattataatataat
gi|24 : -CTTGATGA-T-ATT---------TATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAA-AT-ATT-G-A--TGCAAAAA--AAT-T-ATAGGGT-AG-TCGAGCT-CGTT--------------------TGTC----AAA-G-TTT--GA-T-------AAAAA-C-----------C-GTCAC--AGCATCTGTTTTCT-AAATG-A-CGTTA--TAAATATT-CGCGA-CGTC
gi|10 : AACAAT-TT-GAAAA-AT-ATT-A-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATGTC----AAA-G-TTT--GA-T-------AAAAA-C-----------A-GTCAC--AGCAGCAGTT-------ATG------------AATATT-CGCGA-CGTTATTGAACGACCTTATTCGTTTACTTTTCAT-G------------------CATCAC---AGA--A-C--GGCGTTATTAACGCCGTGCATTAATAAAAGGAAATTAGAATATTCATAAAAAAAAC-CCACA-TCAA--TA--TATTTATA--AAATATCATGGAAA-ATGTTAGTTGAAATTTC--GTCGAAAGT--GTAGATTT-AC-TCGCC--GC--TA--TA--CAT---G----------TAT-----------ATGA--TCGC-AGTA----A-CAATGGATAATTATAA------TATAATAGTAATTAA-AT-AAT--TT-T--A-TAAT-ATT-TG-AATCCCATCAAA-ATT-ATTTGTTT-TAAAGAT-TGCATAGTCTA---GTCATGTATCTATA-TATATTCTAACCAAAAAGACCAAAAAAGACGAGTACTTTAT------TTTTCCT------A-T--TTGACG---------------
gi|33 : ACAAT-TT-GAAAA-AT-ATT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-gtacatttaga
gi|18 : AT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATGTC----AAA-G-TTT--GA-T-------AAAAA-C-----------C-GTCAC--AGCAGCTGTTTTGT-AAACG-A-CGTTA--TAAATATT-CGCGA-CGTCATTGAACGACGTTATTCATCTACTTTTCAT-GCC-TTTCTTC----AA--CATTAC---AGA--A-T--ATCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAA-CCTCA-TCAAT----TTATTTAAAAGAAATGT----GAAT-ATGTTT-TTCAACTTTC--AT
gi|7 : -AAATA-A-CGTCG--CGAATATT-CATAA-CGTCATTAAAac
gi|19 : taggtcgcgggtttacggaccttctcgaaaacccctcctaaaaattttacagaggtatcttgacaatgtatatactactgtgtaaaaaacagcaccgttttttagtaattacgttgtaaacatacatgtaccattgttttaacagcagcgagactgttttccgttgaattatatagaaaataacggtaactgacttttttttgttgtatattcagcttaaaatggagagaatttggtgctgttcttcttgatgatattcatatcaaaacgacacaaatattgatgcaaaaaagttgggtagtcgagttcgtttttatgaaataaagatgtcaaatttgataaaaaccggtcacaaacagcatttttTG-A-CGTTA--TAGATATTGCGCGA-CGTCATTGAACGACGTTATTCATTTTCTTTTCAT-GCC-TTTCTTC----AA--CAACACCATAGA--A-C--AGCGTTATTAACACCCTGCAT---TAAAAGGAAATTCAAATACTCATTAAAAACC----ACA-TCAATTTA-TTATTTATA--AAATATCAAGGAAA-ATATTTGTAGAAATTTC--GTCGAAAGT--GTAGATTT-AC-TGGCC--G---TA--TA--------------------AT-----------ATTG--TCA-----A----A-CAATAGcgtttactttcatgctttttctcaaaaaacatcacaaagaacagcgttattaacgccgtgcattaataaaaggaaattcgaatattcctaaaaaaaaaaaaaaaaaaaacaacaaacaacaacaaaaaaacaaaacatcaatttattattgataaaacatcaaggaaaatgttagttgaaatttcgccgctatacatgtacattatcacagtatgatcgcattaacaatggataattataatataat
gi|14 : ----AA--CATCAC---AAA--AAC--AACGTTACCAACGCCCTGCAT---TGAAGGAAAATTCGAACATTCAT-AAAAAAAC-CCACT-TCAATTCA-TTATTTACA--AAATATCAAGGAAA-CTCTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-AA-TCGCCTATA--TA--TA--TGT---A----------TATAAATGGTAATAATGA--TTGC-AGTA----A-CAATAGATAA-TAAAATA----TA-AA-AGTAATTAG-ATTAAT--TT-T--G-T-AT-ATT-TG-AAT-CCATCGAA-ATT-AT-TGTTA-TA
gi|7 : aaaACA-TCAATTTA-TTATTGATA--AAACATCAAGGAAA-ATGTTAGTTGAAATTTC--GCCG---CT--ATACATGT-ACATTATC-------A--CA--------------------GT-----------ATGA--TCGC-ATTA----A-CAATGGATAATTATAATAtatatacagtttttttttctgaactcatttttctttttttttaaggagtatttttctttttttcatccatcaattcccctctt
gi|31 : taggtcgcgggtttacggaccttctcgaaaacccctcctaaaaattttacagaggtatcttgacaatgtatatactactgtgtaaaaaacagcaccgttttttagtaattacgttgtaaacatacatgtaccattgttttaacagcagcgagactgttttccgttgaattatatagaaaataacggtaactgacttttttttgttgtatattcagcttaaaatggagagaatttggtgctgttcttcttgatgatattcatatcaaaacgacacaaatattgatgcaaaaaagttgggtagtcgagttcgtttttatgaaataaagatgtcaaatttgataaaaaccggtcacaaacagcattttttttaatgacgttatgaatattcgcgacgttatttcgtttactttcatgctttttctcaaaaaacatcacaaagaacagcgttattaacgccgtgcattaataaaaggaaattcgaatattcctaaaaaaaaaaaaaaaaaaaacaacaaacaacaacaaaaaaacaaaT--GTAGATTT-AC-TCGCC--GCTATA--CA--TGT---AAAATATACCGTAT-----------ATGA--TCGC-Ataat
gi|28 : --TA--CA--TTTGCGA----------TA------------ATGA--TCGC-AGTA----A-CAATAGACAA-TATAATA------TAA-------TAGTA--AATAATTAT--T-TCGT-TCT-TG-AATCCCATCAAG-GTT-ACATGTAT-TAGTCATGTACATA
gi|8 : cgtgtaTAAATGA-TATAATA---GTA-------AAT----A--AATACTT-T--GGTAAT-ATT-TG---TCGCATCAAA-T-TTATTTGTTT-TAAAGAT-TGCATAATCTA---GTCATGTATCTCTA-TTC----TAACC-AAATAT---------ACGAA-------T------TTTTTTTTTTATTATTATTTGACG----------------A--T------------ACATTTAG-AA-GA-TCATTAT----AAAAC---G-CCTTTAACAACAACGCAGTTCAA--A-A-T---TAT-TAATAATTTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TG-TTTTGT-CT--AAT-TC-TT-ACAATATGT-T-CGA--CCAAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTA--GAGT----ACACGAC-ATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGG-AACT--GGACCAAACGCTACG-TGAATCTTCATGTCA-ATAAAA--GGAAAACAA-TGT-GA-TAATAA-A-GTT-ACCGC-A-CCCG-ATG-TTTT--ACAAA--TTCGCA---TTTTTGATACAA-GTAATTCGGCA-AT-TCA-ACTG----AC-TTACTTAAATTTTAAACTGAAT-G-CAAATGTGTTCAATGCA-tacatgt
gi|6 : actaaacatttttttttttttaattaagaaatcataagaatttttcggtcgtcaattcatagattttttgttaagccatgcagtttagagattat-A-T-ATATATTT---AA-----ACTTATTCTATCTGACATGTATATATG---------AATC-ATAAGATAG------AGGAG-------TATTTTTTCTTTCT------ATT--TAGACGATATATTTAAAAAGACAAAC------------CCTCTTCCCAA-AACTCACT------AAAAC---GCTTTTTATAAAAAACGC---TTAATCA-CAT---CATGTAATC---------GCTTGGCAATGC-ACGAATCACTTGATAA--TTCTTCGC-TG-TTTTGT-CTCTACTGTT-TCTACAAT---T-TTCGAGCCACGTTTCCTAAT-CCTGCTGGTTCATTATAG-AG-TCTTAGCACGT----AC---ACGAAGAGTAGTAGCCA-TCCACGGAACATTTCACTATTGTAA-CT---GACCAAACGCTACGGTTAACCTTCTTGTCATATAAAC--GAAAAGGAAG-GTCGG-TAAGAATATGTT-ACTGA-AATCCGTATG-TTT---ACAAA--T-CGTG-TTTCTT--ATACTTTGTAATTCGGCACATCTGACACTGCATGAC-TTACCTAAATTCTTAACTGAAT-G-CAAATGAGTTCAACTCATAAC--ATATTTCCA--AAA--TCCAC-GATTT-CTAGTCA-ACA-ATAAAAGCCATTTAAAGTA---ATAAAACATGACTGGGGATAAAGAAATTAGTTTTA-TTGTACTG--GGTGATTCT---CTTTT----GTCCAATGTTTCAAATCGTCACGTATTGCACG--GGTCCTTAGTTTT
gi|32 : tcataatttttatccccttattttatttcggTTT--GC-TG-TTTTGT-CT--AAT-TT-TC-ATAAT---T-T-CGAT-CA-AGTTCCTAATtca
gi|2 : TTCATGTCA-ATAAAAGAAAAAAAAAAATGG-GTGTAATAA-A-GTT-ACCGCGA-TCCG-ATG-TTTTTAACAAA----AGTG-TTTCTTT-ATACCT-GTAATACGGCA-AT--GA-ACTG-----C-TTACTTAAATTCTAACTTGTAT-GGCAATTGCGTTCAACGCA-AA--TAAATTT--CCCAAC--TCCAC-GATTC-TC--TCA-ACACATAAAG-CTAT-TGAAGTACATGTAATG-TAGAGTGGG---AAAGATATTAGTT--A-TT-TA-TG--AGTGATTCT---CTCGAGTTCGTCCAATT-TTCAAAATGC-ACATATTGCACG-TGAGTC-TAGTTTTCAAAAATCAAAAGCGTGCCT--CTCTAGAATGAA-G-CGGCATGAACCGGCACTTTTTTAAGGCGCACTGAGAAAAGTGAATGAAACG-TG-ACGCCAGTAACAAT-GTATACTCAAACGCCCCC-CCCC-TTC-C--------TCTTCTCTTAATTGATCTCTTCCCATGGT-TCCA---TTTTTTACTC-ATTTCATTTTACTTT-TTAAAAATGTAGTTGTTTTCGA
gi|30 : aacgcAAAAA-A-GTT-GCCAA-A-TCCG-ATG-TTTT--ACAAA--TTTGTATTTTTTTTTATACAT-GTAATTCGGCA-Acgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaactactaaattaaaataatgaagaaagaaaaaagaaaaatttgtaaaacacgctcgctgatctctgtatattgtctgtattaaaaatacagatagaataagccccatatcacttcattgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|26 : TCCAATT-TTCAAATCGCCACGTATTGCACG-GTGTCC-TAGTTTTCA-------------------CCTCTAGAA-AAA-GGT-GCATGAA---CCGAATTTTTAA-GCGCACTAAGAAAGT-GAA-TAAACC-TGCACGCC-GAAACAAT-GTTCACTC
gi|23 : TTTTCAAAA-T-GAA-GCGTGC----CTCTAGAA-AAA-G-C-ACATGAA---CCGCAATTTTAA-GCGCACTGAGAAAAT-GAA-GAAACA-TGCATGCC-GAAACAAT-GCTCACTCA-ATACCCCCACCCCACCC-CCTGCGCCTCC--TTTTTAATTGATCTCTT--CATGGTATCCA---
gi|2 : tttAAACTACTAAATTAAAATAATG-----AAGAAA-GAAA--AAAG-----AAAAATTTGTAAA-ACACGCTCGCTG--------AT--C----TCT-GTATA-------T-TGTCTGTATTAAAAAT----ACAGATA---GAATAAGCCCCATATCACTTCATT
gi|1 : aacgcttcatgtcaataaaagaaaaaaaaaaatgggtgtaataaagttaccgcgatccgatgtttttaacaaaagtgtttctttatacctgtaatacggcaatgaactgcttacttaaattctaacttgtatggcaattgcgttcaacgcaaataaatttcccaactccacgattctctcaacacataaagctattgaagtacatgtaatgtagagtgggaaagatattagttatttatgagtgattctctcgagttcgtccaattttcaaaatgcacatattgcacgtgagtctagttttcaaaaatcaaaagcgtgcctctctagaatgaagcggcatgaaccggcacttttttaaggcgcactgagaaaagtgaatgaaacgtgacgccagtaacaatgtatactcaaacgcccccccccttcctcttctcttaattgatctcttcccatggttccattttttactcatttcattttactttttaaaaatgtagttgttttcgacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAATTATGTAAGAA--AAA-GAAAAGAAAG-----AAAAATTTGTGAATACACG--CACTG--------TT-CC----TCT-GT-TA-------TGTGTCTGTATTC-AAAT----ACATATA---AAT-AAGC-----ATCACTTCATTgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|17 : taacgtagggcgcgggtttacgggaccttctcgaaacccctcccgaaaattttgacagaggagattattcttgacaatgtatatactacggtttaaaaaattatttttcgataacagcaccgtttttagtaatacgtcgtaaacatttaccattgctttaatagcacgcgatactgtatgccgttgattatttataggaaaatatacggtgactgactttttcttggtataattcagcttaaaatggagagaatgtggtttgctgttcttcttgatgatgattcatatcaaaacgaaacaaaaacaattgaaaatatttgatgcaaaaaattatggggtcagtcagctcgttttttgagtgaaaaaagatgctcaatgtttgataaaaaccgtcaccagtagctgtttttttaaatggacgtaattaaattattcgcgacgtcatgaacgacgtgattcatttacttttcattgccgtttcttcaaaacatcacagaacagcgtatcacgccctgcattaaaaggaagtgaatacgcataaaaaaaaaaccacatcaatttaattaattataagatatcaaggaaaatgttgttgaaattttctgtcgaaagttggtagattttactcgccgctatacatgttattatggattcgctagtaaacaatagataatggtattatgaataattaaataatttttataatcattctgtaaccatcattatttgttttaaaaatacattgtctaagtcatgtatctataattctaaccaaaagacagaggtgtttttttctatttgacgatacattagaagatccacctctctcaattttaaaaaaaaacaatgttcaaatatagagataagtgtgtgagaggttggaatgcagattcacttgaaacttttgttgtttttgtctaatttctcacaatttcgaccaagtcctaattctattgcgttatagtagcttagagtacagacatgtgtagtccatcaacggacattctgttggaaatggaccaaacgctatccatgccaataaaagaaaaaaaatgtgttaataaagttaaccgcatccgatgtttttacaaaggttctttatacatgtaattcggcaattgaactgactttactttaattctaacctgaatggcaaatgcgttcaacgcaaatatttccaaacttccacggattcgtctcacacaaattaatgctatcttaagtagtgggaggaagatattagttttattttactaataattttctcagcgtcaattttcaatcgccacgtagtgcacgttggttctagttttcaaaaatgaagcgtgcctctagaaaaaggcgctgaaccgcccattttaagcgcatgagaaagtgaataagcgatgcacgccgaaacaatagtgcactcaacaccccccccccccgcgccatcttttgaattgctccatggtaccattttttttttcaattgcattacttcgttaaaatttgagctggttcgaattatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaATG-----A--AAAAGAAA-AAAAGTACAGAAATATTTGTAAA-ACAT---T-CTGGAAAATTCTTTCCATGGCCATGTAGTAATATGATATGTTTGTATTCAAAATATAGACATGTATATA---AAGC----Tggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
6 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|4 ): AAGTTTCTTCATCATTTTCGCATTTTCGAATGTTAAAAAAATGTGCATGCATACAAAAGACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGGGCAGGGTGAATGTGACCGAAAACTCTTGTGACTAGCGAAGATGAAAAAGACGGAATAAACAAGTGATTCATACACATCCGAAAAATATTAAGATCAATTTTTAACATTATATTTTTGCCAGTATCGACTTTGAATCGGTTTGCTCATTTTTCAAAATCAAATGGCCTTTTTCCCCAATGAATTATTTGCACAGGTGCGCCATAATGCAATATACCGACAGTGGTGAAATCCGGGTGAACATTGTGTAATGTCACTATAACAATAGATTTTTGCCTAGTATGGTAAAGGAAGAACGAAAGAACGTGTTTGGCGATTTCTAATGCAAGTTTTAAAATATTATCAACGTAGAAAAGAAGATAAGTTTGTCTATCCCAAGATAAGAAATGATAAAACATGTATAAGGTAACGAAACTGTTTGTGTCATTGTATCATGCCTCTAGTGTCCGTTTCTGTAACCTTGTCTGTATTTATGGCAAATACAGATAATACTGTACCAATGCATATCATAGTGCATAATAAACATTGTGATTTTACAATTAAAGCATGTGACGAGTTTAGTTTTCTCGTTTATTATTAAATTTATTGTTTGTGATCAAAAATGAAAACCATACTGTGCATAATATATTAAAGTGTATTTTATCCGTCTCTCTTTGTCTGAAAATTTTAAAGAGTGTTCTGCTAATACGCGTCAAATTTCCTGAATAAAACCTTTAAAGTGCCCCACATGGTCTCCCCTTTCTAACTTTTCTCCGTAAAAGATTGCACCCAGCTTCATATTTTTCCCGAAAACTGTCGCTGTTATTACTTTATCATATAAATTCATCTGCCTTGCGTCGAAATGAAAGGATAGACTTTACGATAGTAAACGAAAACATTGATACTATCTAAAGCATGATTAAAGCAATTTGTTGTT
Unaligned ( gi|16 ): TTTGCATCGGAACTGAGTCCCAAGGAAGACTTAATCGAGAAATAAGAGCGAGAACCTTGATTATACCCTCTTTGGTGTAATGCTGGTTTTAGGAGGCCTAAACAGGCAGCCTATTTGTTAATATCTAAAGTGCATATCGGTAAAGTTTTTACGCTCTCTATCATCAGTCAATCTATCAAAGAATTGCTTACGTCACAATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGGATTTTGCGCCCGGTACCCACAAAACTGCCGCTGTTACGTAGCCGAAAAACGCTGCGACC
Unaligned ( gi|20 ): CCTCTGTAAGAATTGATATTATAACAGGATGGAATGCTTACCTCGAATTTTGCATCGGAAACGGAAGAAAAGACTCTTAGAAAATTAAACGAAGCATGATATATTTCAATATGATGAGATAATTTAAATTTAAACGCTTATAAATCTATTCACTACGCTAATTGTTACATGACCTACTCACAATGAAATGTGCACGAAAAAAGACCAATCGTAA
Unaligned ( gi|22 ): GCTGCAAGTTCGTCCAAAGTGTAGACGTAAGTAACTGAACGAGCATACATATATATGTTAGCGGCTATCGAATTTCAGAGATCCTAGTAGTAAGTAGATCATTTTATAATGTTTTGAATCGCCATTCCAAGATGAAAAGTGTGTTTAAAGTTGACGAATAGTTCTAGGTAGGTAT
Unaligned ( gi|25 ): TATTGCGTTAACGTAATTTCAACCAAAAATGACATTTTGACAACTCATTTTACCACATCAGAAATGAATGAAAGGATAAATGATAGGGGCTGGGATCATGCTCCATGTCTCTAGTGCATGTGATCTGTACCCTTGTTTGTATATGAA
Unaligned ( gi|29 ): CGAACTAAATTTTTTTTTATTAAGAAATCATAAAAAAATTTCGTCCAATCATAATTGTTGTTAAGCCATCAGTTGAAAGATTATTAAATGATAGTGAAATAAAA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111
lowQualScore : 1 1111 1 1 2222222 2222 333333333 222222222222 11 11111 1 333333 111 111 222222222 111111 1111 1 1111111 2222222222222 11 1111 111 1111 111 11111 222222 4444444444444444444444444444444444 44444444444444 33 111 1111 2222222222 222222222 11 33333333333 111 1111 0000000000000000000000000000000000000000000 22222 1 11111 111 22222222 11 11 111 11111 111 2 1111 2222 11 11111 2222 333333 111 11111 33333 1 22 1 11 111 1 222 1 8888888888888888 1 1 1 11 222222 11 11 1111111 1111 22222222 111 1 1 44444444444444444 11 1 11 2 22 8888888888888888888888888888888888888888888888888888888888888888888888888888888888 44444444 22 1 222 1 33 33333
lowQualScore : 4 4 4 4 55 2 4 5 0 5 5555 5 5 888 5 55 0 5 5 33 5 5 7 1 1 77 5 77 0000000 2222 5 5 777777777 5 999999999999 888 8888 5 33 44444 5 5 5 77 1 77 444444 5 000 5 77 77 77 000 5 5 5 000000000 999999 888 5 0000 66 4 4 1 4 8 4 55 3 55 3 3 0 3 3 4 777 4 66 4 55 4 4 4 55 4 8888888 2222222222222 4 00 5 4 4 4 8 4 4 5 0 1 11 1 0 5 88 7777 555 5 0000 777 88 1 5 5 3 5 0 66 5 3 66 3 66 4 11111 4 777 000000 5555555555555555555555555555555555 6666 4 4 8 4 777 4 11111111111111 0 00 11 4 000 4 999999 66 2 9999 4 3333 99999999 66 5 6666666666 888 333333333 44 33333333333 888 5 5555 1 8888888888888888888888888888888888888888888 22222 8 6 3 5 1 99999 444 8 22222222 8 8 8 0 11 99 6 44 6 6 6 6 111 6 6 99999 1 6 444 3 88 8 8 7777 5555 1 11 8 88 8 88 0 22222 3 2 6666 8 8 777777 8 8 6 6 6 6 6 6 6 99 555 6 66 7 6 6 88 8 77777 8 1 8 8 88 55555 2 0 33 0 22 777 0 111 0 6 1 7777777777777777 0 4 3 0 0 2 2 0 33 33 333333 11 8 0 33 8 0 4444444 9999 8 8 8 8 8 0 77777777 8 8 99 8 8 8 1 111 2 0 0 77777777777777777 9 3 33 66 0 55 7 1 7 3 1 22 44 2222222222222222222222222222222222222222222222222222222222222222222222222222222222 1 22222222 00 3 555 0 3 6 7 6 7 7 11 55555
lowQualScore : . . . . .. . . . . . .... . . ... . .. . . . .. . . . . . .. . .. ....... .... . . ......... . ............ ... .... . .. ..... . . . .. . .. ...... . ... . .. .. .. ... . . . ......... ...... ... . .... .. . . . . . . .. . .. . . . . . . ... . .. . .. . . . .. . ....... ............. . .. . . . . . . . . . . .. . . . .. .... ... . .... ... .. . . . . . . .. . . .. . .. . ..... . ... ...... .................................. .... . . . . ... . .............. . .. .. . ... . ...... .. . .... . .... ........ .. . .......... ... ......... .. ........... ... . .... . ........................................... ..... . . . . . ..... ... . ........ . . . . .. .. . .. . . . . ... . . ..... . . ... . .. . . .... .... . .. . .. . .. . ..... . . .... . . ...... . . . . . . . . . .. ... . .. . . . .. . ..... . . . . .. ..... . . .. . .. ... . ... . . . ................ . . . . . . . . .. .. ...... .. . . .. . . ....... .... . . . . . . ........ . . .. . . . . ... . . . ................. . . .. .. . .. . . . . . .. .. .................................................................................. . ........ .. . ... . . . . . . . .. .....
lowQualScore : 0 0 0 0 55 0 4 0 0 0 6666 0 0 888 0 44 4 0 0 22 0 0 4 4 4 99 7 99 7777777 1111 7 7 111111111 7 333333333333 000 3333 7 66 33333 7 7 7 99 4 99 111111 7 000 7 99 99 99 000 0 0 0 000000000 444444 888 0 6666 99 0 0 3 0 0 0 55 9 55 6 6 5 6 6 0 000 0 44 0 55 0 0 0 55 0 5555555 7777777777777 4 66 1 4 4 4 9 4 4 0 1 4 44 4 1 7 77 5555 666 0 6666 555 66 8 0 0 4 0 1 99 0 6 11 2 11 4 11111 4 888 666666 5555555555555555555555555555555555 1111 0 4 9 4 000 4 00000000000000 1 00 66 4 222 4 000000 11 6 4444 4 9999 11111111 11 0 9999999999 888 000000000 11 11111111111 111 7 7777 7 0000000000000000000000000000000000000000000 00000 0 0 2 6 0 00000 000 0 22222222 0 0 0 8 00 22 7 00 7 7 7 7 777 7 7 77777 0 7 000 2 88 0 0 0000 4444 4 00 0 88 0 88 8 66666 2 5 8888 0 0 666666 0 8 7 7 7 7 7 7 7 22 555 7 88 2 7 7 88 0 88888 0 0 0 0 88 00000 5 0 88 0 55 555 0 000 8 5 0 2222222222222222 0 0 2 0 0 5 5 2 55 88 000000 00 0 8 66 0 8 6666666 0000 0 0 0 0 0 8 88888888 0 0 00 0 0 0 0 000 0 0 0 55555555555555555 2 2 88 55 0 00 3 0 3 3 0 00 77 0000000000000000000000000000000000000000000000000000000000000000000000000000000000 0 77777777 00 3 000 7 3 7 3 7 3 3 77 77777
consensus : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GT-AAAAATT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CA--TAC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-A--TATA-GAAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAA-T---TCAGCTTAAAA-TG---G-A--GAGAATTTGG--TGCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TTG-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCA-C--AGCAGCTG-TTTTTTAAAT-GA-CGTTA-TAAA-TATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCA-TGCC-TTTCTTC----AACATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCAT-TAAAAAAACCCA-CAT-CAATTT-ATTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---CGCC--GC--TACA--TGT---A----------TA-T-----------ATG-A--TCGC-AG-T-AAC-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAATAAT--TTTATA-AT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGTTTTTT-TTTTTTCTATT--TTGACGATACATT---AAAGA--C---C--CCTCTTCC-AA-AA-TCACTA-----AAAAC---G-TTTTTA-ACAACAACGCAGTTCAA--A-TAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG--TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-A---ACATATTTCC-AAAC-TCCAC-GATTC-TC---TCA-AC-ACATAAAAGCTATCTAAAGTAC-TGTAA-NAC--G-AGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTC--TCG------TC--CAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAA-AAA-G-CG-CATGAACCGCGCA--TTTTTAAG-CGCACTGAGAAA-GTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTCA-A-CACCCCC-CCCC-CCC----C---GC---C-T-CTTTTTAATTGATCTCTT--CATGGTATCCA-TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----A--AAAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
Reference ( family-200 ) : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GT-AAAAATT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CA--TAC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-A--TATA-GAAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATT---TCAGCTTAAAA-TG---G-A--GAGAATTTGG--TGCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TTG-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCA-C--AGCAGCTG-TTTTTTAAAT-GA-CGTTA-TAAA-TATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCA-TGCC-TTTCTTC----AACATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCAT-TAAAAAAACCCA-CAT-CAATTT-ATTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---CGCC--GC--TACA--TGT---A----------TA-T-----------ATG-A--TCGC-AG-T-AAC-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAATAATAATTTATA-AT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TC-TTAACCA-AAAAGA---------ANGAGTTGTTT-TTTTTTCTATT--TTGACGATACATT---GGAGG--C---C--CCTCTTCC-AA-AA-TCACTG-----AAAAC---G-TTTTTA-A-AACAACGCAGTTCAA--A-TAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACANTTCCTAAT-CCTGTTG---CGTTATAGCAG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG--T-AAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAANCTGAAT-G-CAAATGCGTTCAACGCA-A---A-ATATTTCC-AAA--TCCAC-GATTC-TC---TCA-AC-A-ATAAANGCTATCTNAAGTA---GTAA-G----G-AGTGGGGG-AAAGATATTAGTTTTA-TT-TACTGAGTGATTCTC--TCG------TC--CAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAA-AAA-G-CG-CATGAACCNCGCA--TTTTTAAG-CGCACTGAGAAA-GTGAAN-AAACG-TGCACGCC-GAAACAAT-GTNCACTCA-A-CGCCCCC-CCCC-CCC----C---GC---C-T-CTTTTTAATTGATCTCTT--CATGGTATCCA-TTTTTTACTCAATTNCATTTTACTTCGTTAAAANTNNAGCTGTNTTCGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTACTAAATTAAAATNATG-----A--AAAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
gi|1 : ACGTAGGG-C-GCGGGTTTA-CGGGACCTTCTC--GAAA-CCCCTCC-CG-AAAATTTTGACA-GAGGAGATTATTCTTGACAATG-TATA---TACTACGGT-TTAAAAAATT-ATT-TTTCGAT-AA-CAG-CACCG--TTTTTAGTAA-T-ACGTCGTA--AA-CATTTAC------CATTGCTTTAATAG----CACG-C---------GAT-ACTGTATGCCG------------TTG---ATT-ATTTATAGGAAAATAT-ACG-----GTG-ACTGACT-T-T--T-TC--TTGGTATAA-T---TCAGCTTAAAA-TG---G-A--GAGAATGTGGTTTGCT--GT---TCTT-CTTGATGA-TGATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-T---GAAAAT-ATTTG-A--TGC-AAAA--AAT-T-ATGGGGTCAG-TC-AGCT-CGTTTTTTGAGTGAA-A--AAAGATGCT--CAAT-G-T-TT--GA-T-------AAAAAC-----------C-GTCACC--AGTAGCTGTTTTTTTAAATGGA-CGTAATTAAATTATT-CGCGAC-GTCA-TGAACGACGTGATTCATTTACTTTTCATTGCCGTTTCTTCAA--AACATCAC---AGAA-CA----GCG-TATC-ACGCCCTGCAT---TAAAAGGAAGT--GAATACGCATAAAAAAAAAACCA-CAT-CAATTTAATTAATTATA--AGATATCAAGGAAA-ATG-TTGTTGAAATTTTCTGTCGAAAGTTGGTAGATTTTA-----C-T---CGCC--GCTATACA--TGT--------------TATT-----------ATG-GATTCGCTAG-TAAAC-AAT---AGATAA-TGGTAT-----T-ATGAAT-AATTAAATAAT-TTTTATA-ATCA-TTCTGTAA---CCAT--CA---TTA----TTT-GTTT----TAAAAA--T---AC--ATTG-TCTA---------A---GTCATGTATCTATAA---TT-CTAACC--AAAAGA---------CAGAG--GTGT-TTTTTTCTA-T--TTGACGATACATT---AGAAGATC---CA-CCTCTCTC----AA-TT-TTA-----AAAA-----------A-A-AACAAT---GTTCAA--A-TATAGAGAT-AAGTG--TGTGAGAGGTTGG-AATGC-A-GATTCACTTGAAAC--TTTT--GT-TGTTTT-TGT-CTAAT-TTCTC-ACAAT---T-T-CGA--C-CAAGTCCTAAT-TCTATTG---CGTTATAGTAG--CTTAG-A-GT----ACAG-ACATGTGTAGT--CCA-TCAACGGA-CATT-C--TGTTGGAAA-T--GGACCAAACGCTA-----------TCCATGCCA-ATAAAAGAAAAAAAA-----TGT-GTTAATAA-A-GTTAACCGC-A-TCCG-ATGTTTTT--ACAAA-----G-GTTC-TTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----ACTTTACTTTAATTCTAACCTGAATGG-CAAATGCGTTCAACGC--A---A-ATATTTCC-AAACTTCCACGGATTCGTC---TCACACAA-ATTAATGCTATCTTAAGT----------------AGTGGGAG-GAAGATATTAGTTTTATTT-TACT-AATAATTTTC--TCA------GCGTCAAT-TTTC-AATCGCCACGTAGTGCACGTTGGTTC-TAGTTTTCAAAAAT-G-AAGCGTG----C-CTCTAGAA-AAAGG-CG-C-TGAACCGCCCA---TTTTAAG-CGCA-TGAGAAA-GTGAAT-AAGCGATGCACGCC-GAAACAATAGTGCACTCA-A-CACCCCC-CCCC-CCCG---C---GC---CAT-CTTTTGAATTG----CTC--CATGGTA-CCATTTTTTTTTTCAATTGCA--TTACTTCGTTAAAATTTGAGCTG-GTTCGAATT
gi|1 : taAAATTATGTAAGAA--AAAGAAAAGAAAGAAAAATTTGTGAATACACG--CACTG-TTCCTCTGT-TATGTGTCTGTATTC-AAATACATATAAAT-AAGC-----ATCACTTCATTatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaaattatgtaagaaaaagaaaagaaagaaaaatttgtgaatacacgcactgttcctctgttatgtgtctgtattcaaatacatataaataagcatcacttcattggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|10 : taacgtagggcgcgggtttacgggaccttctcgaaacccctcccgaaaattttgacagaggagattattcttgacaatgtatatactacggtttaaaaaattatttttcgataacagcaccgtttttagtaatacgtcgtaaacatttaccattgctttaatagcacgcgatactgtatgccgttgattatttataggaaaatatacggtgactgactttttcttggtataattcagcttaaaatggagagaatgtggtttgctgttcttcttgatgatgattcatatcaaaacgaaacaaaaacaattgaaaatatttgatgcaaaaaattatggggtcagtcagctcgttttttgagtgaaaaaagatgctcaatgtttgataaaaaccgtcaccagtagctgtttttttaaatggacgtaattaaattattcgcgacgtcatgaacgacgtgattcatttacttttcattgccgtttcttcaaaacatcacagaacagcgtatcacgccctgcattaaaaggaagtgaatacgcataaaaaaaaaaccacatcaatttaattaattataagatatcaaggaaaatgttgttgaaattttctgtcgaaagttggtagattttactcgccgctatacatgttattatggattcgctagtaaacaatagataatggtattatgaataattaaataatttttataatcattctgtaaccatcattatttgttttaaaaatacattgtctaagtcatgtatctataattctaaccaaaagacagaggtgtttttttctatttgacgatacattagaagatccacctctctcaattttaaaaaaaaacaatgttcaaatatagagataagtgtgtgagaggttggaatgcagattcacttgaaacttttgttgtttttgtctaatttctcacaatttcgaccaagtcctaattctattgcgttatagtagcttagagtacagacatgtgtagtccatcaacggacattctgttggaaatggaccaaacgctatccatgccaataaaagaaaaaaaatgtgttaataaagttaaccgcatccgatgtttttacaaaggttctttatacatgtaattcggcaattgaactgactttactttaattctaacctgaatggcaaatgcgttcaacgcaaatatttccaaacttccacggattcgtctcacacaaattaatgctatcttaagtagtgggaggaagatattagttttattttactaataattttctcagcgtcaattttcaatcgccacgtagtgcacgttggttctagttttcaaaaatgaagcgtgcctctagaaaaaggcgctgaaccgcccattttaagcgcatgagaaagtgaataagcgatgcacgccgaaacaatagtgcactcaacaccccccccccccgcgccatcttttgaattgctccatggtaccattttttttttcaattgcattacttcgttaaaatttgagctggttcgaattatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAACAAT-TT-GAAAAAT-A-TTA-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------A-GTCA-C--AGCAGC---------A--------GTTA-TGAA-TATT-CGCGAC-GTTATTGAACGACCTTATTCGTTTACTTTTCA-TG----------------CATCAC---AGAA-CG----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTAGAATATTCAT-AAAAAAAACCCA-CAT-CAA--T-A-TATTTATA--AAATATCATGGAAA-ATGTTAGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---CGCC--GC--TATA--CAT---G----------TA-T-----------ATG-A--TCGC-AG-T-AAC-AAT---GGATAATTATAATA----TAATAGT--AATTAAATAAT--TTTATA-AT-A-TT-TG-AATC-CCAT--CAAAATTA----TTT-GTTT----TAAAGAT-T---GC--ATAG-TCT----------A---GTCATGTATCTATATATATT-CTAACCA-AAAAGACCAAAAAAGACGAGTACTTTATTTTTCCTA-T--TTGACGGTACATT---ggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|12 : GTAG-T-C-GCGG-TTT--CGG-AGCTTCTCATGATATACCCTCC-TATAAAATTTTGCCA-GGGG----TAT-CT-GACAATGATATA---T-CTACTGT-GT-ATAAATA-ATT-TTTCGATAAA-TAG-CACCG---TTTTAGTTATTAACGTTGTA--AC-AA--TAC------CATTGTTTT-ACAGTCA-CA-GACCTATG----GAG-ACTGATTT-CA------------TT-A--ATT-T--TATA-GAAAATA--ACG-----GTACACTGACT-T-TTCT-TT--TTTGTTTGGTA---T-AGCTT-AAA-TGGTCG-A--GA-AATTTGG--TGCTAGGTGTATCTT-CT--ATCA-T--TTAGCGTCAGGCATATGCGCGATAAGAGACCGTAAACGACCAG--AAACCATGCT-AAACAATCA-TTG-GATTGCCAAAA--AAT-TAATGGGGA-TG-CCGAGCTCCGTTTTT---ATGAA-AT-AAGCATG-TTCCAGA-G-TGTT--GACT-------AAAAAC-----------CTGTCtaga
gi|13 : aaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGA----TAT-CTTGACAATA-TATA---TACTACTGT-GT--ACATTT-TTT-TTTCGATAAA-CAG-CACCG--TTTTTAGTAATT-ACGTTGTA--AA-CA--TAT------CATTGTATTAACAGTGCTCA-G-C---------AAG-ACTGCTTTCCA------------TTGG--ATT-A--TATA-GAAAATA--ACG-----ATA-ATTAATT-T-T--TGTT--GTTGTATAA-T---TCAGCTTAAAA-TG---G-A--GAGAATTTGC--TGCT--GT---TCTT-CTTGATGA-T-ATC---------TATAT------C-TAA---CA---------AA--AAACAAT-TT-G-AAAAT-ATTTG-A--TGC-AAAA--AAT-T-AT-GGGT-AG-TCGAGCT-CGTTTTT---ATGAA-TA-AAAGATG-T--CAAA-G-T-TT--GA-TAAAAAAAAAAAACCAAAAAAAACAC-GTCA-C--AGCAGCTG-TTTTg
gi|14 : ta----AACATCAC---AAAAACA----ACGTTACCAACGCCCTGCAT---TGAAGGAAAATTCGAACATTCAT--AAAAAAACCCA-CTT-CAATTC-ATTATTTACA--AAATATCAAGGAAA-CTCTTTGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----A-T---CGCCTATA--TATA--TGT---A----------TA-TAAATGGTAATAATG-A--TTGC-AG-T-AAC-AAT---AGATAA-TAAAATA----T-A-AAAGTAATTAGAT--TAATTT-TGTAT-A-TT-TG-AAT--CCAT--CGAAATTA-----TT-GTTA----TATA----T---AT--ACAG-TTTTTTTTTCTGAA---CTCATTTTTCTTTTT---TT-TT--------AAGG---------AGTATTTTTCT-TTTTTTC
gi|18 : aaaAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCA-C--AGCAGCTG-TTTTGTAAAC-GA-CGTTA-TAAA-TATT-CGCGAC-GTCATTGAACGACGTTATTCATCTACTTTTCA-TGCC-TTTCTTC----AACATTAC---AGAA-TA----TCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCAT-TAAAAAAAACCT-CAT-CAAT----TTATTTAAAAGAAATGT----GAAT-ATGTTT-TTCAACTTT--CATatccatcaattcccctctt
gi|19 : T-GA-CGTTA-TAGA-TATTGCGCGAC-GTCATTGAACGACGTTATTCATTTTCTTTTCA-TGCC-TTTCTTC----AACAACACCATAGAA-CA----GCGTTATTAACACCCTGCAT---TAAAAGGAAATTCAAATACTCAT-TAAAAA---CCA-CAT-CAATTT-ATTATTTATA--AAATATCAAGGAAA-ATATTTGTAGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---GGCC--G---TATA--------------------A-T-----------ATT-G--TCA-------AAC-AAT---AGac
gi|2 : -AACGCTTCATGTCA-ATAAAAGAAAAAAAAAAATGGGT-G-TAATAA-A-GTT-ACCGCGA-TCCG-ATG-TTTTTAACAAA--AGTG-TTTCTTT-ATACCT-GTAATACGGCA-AT--GA-ACTG-----C-TTACTTAAATTCTAACTTGTAT-GGCAATTGCGTTCAACGCA-A---ATAAATTTCC-CAAC-TCCAC-GATTC-TC---TCA-AC-ACATAAA-GCTAT-TGAAGTACATGTAA-T----GTAGAGTGGG-AAAGATATTAGTT--A-TT-TA-TGAGTGATTCTC--TCGAGTTCGTC--CAAT-TTTCAAAATGC-ACATATTGCACG-TGAGTC-TAGTTTTCAAAAATCAAAAGCGTGC---CTCTCTAGAATGAA-G-CGGCATGAACCG-GCACTTTTTTAAGGCGCACTGAGAAAAGTGAATGAAACG-TG-ACGCCAGTAACAAT-GTATACTCA-AACGCCCCC-CCCC-TTC----C---TC---T-T-CTCTT-AATTGATCTCTTCCCATGGT-TCCA-TTTTTTACTC-ATTTCATTTTACTTT-TTAAAAATGTAGTTGTTTTCGA
gi|2 : AAACTACTAAATTAAAATAATG-----AAGAAAGAAA--AAAGAAAAATTTGTAAA-ACACGCTCGCTG-AT-CTCTGTATAT-TGTCTGTATTAAAAATACAGATAGAATAAGCCCCATATCACTTCATTcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaactactaaattaaaataatgaagaaagaaaaaagaaaaatttgtaaaacacgctcgctgatctctgtatattgtctgtattaaaaatacagatagaataagccccatatcacttcattgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|22 : aacgcttcatgtcaataaaagaaaaaaaaaaatgggtgtaataaagttaccgcgatccgatgtttttaacaaaagtgtttctttatacctgtaatacggcaatgaactgcttacttaaattctaacttgtatggcaattgcgttcaacgcaaataaatttcccaactccacgattctctcaacacataaagctattgaagtacatgtaatgtagagtgggaaagatattagttatttatgagtgattctctcgagttcgtccaattttcaaaatgcacatattgcacgtgagtctagttttcaaaaatcaaaagcgtgcctctctagaatgaagcggcatgaaccggcacttttttaaggcgcactgagaaaagtgaatgaaacgtgacgccagtaacaatgtatactcaaacgcccccccccttcctcttctcttaattgatctcttcccatggttccattttttactcatttcattttactttttaaaaatgtagttgttttcgacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGCAAGTT--CGTCCAAAGT--GTAGA-CGTAAGTAAC-TGAACGA---GCA-TACA--T-----A----------TA-T-----------ATG-T--TAGC-GGCT-ATCGAATTTCAGAGAT-CCTAGTA------GTAAG-----TAGATCAT--TTTATA-AT-GTTT-TG-AATCGCCATTCCAAGATGAAAAGTGT-G-TT----TAAAGTT-G---ACGAATAGTTCT----------A---GGTAGGTATgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|23 : TTTTCAAAA-T-GAA-GCGTGC---C--TCTAGAA-AAA-G-CA-CATGAACC--GCA--ATTTTAAG-CGCACTGAGAAA-ATGAAG-AAACA-TGCATGCC-GAAACAAT-GCTCACTCA-A-TACCCCCACCCCACCCCCTGC---GC---C-TCCTTTTTAATTGATCTCTT--CATGGTATCCA-
gi|24 : ttt-CTTGATGA-T-ATT---------TATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TTG-A--TGCAAAAA--AAT-T-ATAGGGT-AG-TCGAGCT-CGTT--------------------TG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCA-C--AGCATCTG-TTTTCTAAAT-GA-CGTTA-TAAA-TATT-CGCGAC-GTC
gi|26 : ------TC--CAAT-TTTCAAATCGCCACGTATTGCACG-GTGTCC-TAGTTTTCA-------------------C-CTCTAGAA-AAA-GGTG-CATGAACC--GAA--TTTTTAAG-CGCACTAAGAAA-GTGAAT-AAACC-TGCACGCC-GAAACAAT-GTTCACTC
gi|27 : CGTAGGT-C-GCGGGTATA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----CAT-CTTGACAATG-TATA---TACTACTGT-GT-AAAAATT-ATT-TTTCGATAAA-CAG-CACCG-TTTTTTAGT
gi|28 : --TACA--TTTGCGA----------TA-------------ATG-A--TCGC-AG-T-AAC-AAT---AGACAA-TATAATA----T----AA--TAGTAAATAATTATT--TC-GT-T-CT-TG-AATC-CCAT--CAAGGTTA----CAT-GTAT----TAGTCATGT---AC--ATA
gi|3 : cgtgtaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCCC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GT-AAAAATT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTTGTA--AA-CA--TAC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-A--TATA-GAAAATA--ATG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTCGATCAGCTTAAAA-TG---G-A--GAGAATTTGG--TGCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TTG-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AC-AAAGATG-T--TAAT-G-T-TT--GA-T-------AAAAAC-----------T-GTCA-C--AGCAGCAG-TTTTTTAAAT-GA-CGTTA-AAAA-TATT-CGCGAC-GTCATTGAACGACGTTATTCATTTACTTTTCA-TGCC-TTTCTTC----AACATCAC---AGAA-TA----GCGTTATTAACGCCCTGCAT---TAAAATGAAATTCGAATACTCAT-TAAAAACCCCCA-CAT-CAATTT-ATTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---CGCC--GC--TACA--TGT---A----------TA-T-----------ATG-A--TCAC-AG-T-AAC-AAT---AGATAA-TATGATACTTGT-ATAAAGGAATTAAA-AATAATTTATA-AT-A-TT-TG-AATC-CCAT--CAAAA-TA----TAT-GTTT----TAAAGAT-T---AC--ATAG-TCC----------A---GTCATGTATCTATAT---TCATTAACC--AAAAGA---------ACGAG-------TTTTTTCTATT--TTGACG---CAT------------------CCTCTTCC-AA-AA-TCA--------AAAAC---G-TTTTTA-ACAACAACGCAGTTCAA--A-AAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TG-TTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAATACTTGTTG---CGTTATAG-AG-TCTTAA-A-GT----AC---ACATGAGCAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACTCGGAACCAAACGCTACG--TGAAC-TTCCATGTCA-ATAAAAAAAAAAAAA----CTGT-GTTAATAA-A-GTT-ATCGC-A-TCCG-ATG-TTTT--ACAAATTCGTA-TTTTTTTTATACAT-GTAATTCAGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-TAAATGCGTTCAACGCA-ATCTT-ATATTT-A-AAA--TCCAC-GATTC-TT---TCA-AC-ACATAAAAACTATCTAAAGTACTTGTAATGAT--G-AGTGGGGG-AAAGAAATTAGTTTTA-TT-TGCTGAGTTAT--TC--TCG------TC--CAAT-GTTCAAATTGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTACGTTC-CTCTAGAA-AAA-G-CG-CATGAA--ACACA--TTTTTAAG-CGCACTGAGAAA-AGGAAG-AAACG-TGCATACC-GAAACAAT-GTTCACTCATA-TACCCCC-CCCC-TCC----CTTGGCCTTC-T-TTTTTTAATTGATCTCTT--AATGGTATCCA-TTTTC--CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTATAATTATG-----A--AAAGAAA-GAAAGAAATATTTGTACA-ACAC---CACTGTTTCCTCAGTATTTGTGTCTGTATTCAAAATACATAT-AA--AAGC----TATCACTTCATTtacatgt
gi|30 : AAAAA-A-GTT-GCCAA-A-TCCG-ATG-TTTT--ACAAATTTGTATTTTTTTTTATACAT-GTAATTCGGCA-A
gi|31 : T--GTAGA-TTTA-----C-T---CGCC--GCTATACA--TGT---AAAATATACCGTA-T-----------ATG-A--TCGC-A
gi|32 : TTT--GC-TGTTTT--GT-CTAAT-TT-TC-ATAAT---T-T-CGAT-CA-AGTTCCTAAT-
gi|33 : ACAAT-TT-GAAAAAT-A-TTG-A--TGCGAAAA--AAT-T-ATGGGGT-AG-
gi|34 : TAGGT-C-GCGGGTTTA-CAG-ACCTTCTC--GAAAA-CCCTCC-T
gi|35 : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--
gi|5 : tttaCGTAGGT-CCGCGGGTTTAACGG-ACTTTC-----GAAACCCCTC--TG-AAATATT-GACA-GAGGG---TA--CTTGACAATG-TATAATATACTACTGT-GT-TAAAATTTATTATTTCGA--AA-CAGGCACCGCTTTTTTAGTAATTCACGTCATA--AAACA--TAC-------ATTGTTTTAAC-G----CA-G-C---------GAG-ACTGTTTCC--------------TTGA--ATTTA--TAT--GTAAATAGTAAG-----GTG-ACTGACT-T-T--TACT--GTTG-ATA--T---TCAGCTTAAAA-TG---G-ACAGAGAATTGGT--TGCT--GT---TCTTACTTGATGA-T-ATG---------CATAT------AAAAA---CA-AAA----CAACAAAACAAT-TT-GGAAACT-A-TTGCA--TGC-AAAA--AAT-T-ATGGGGT--G-TCGAGCT--GTTTTT---ATGAA-ATTAAAGATG-T--CAAAAG-T-TTTGGA-T-------AAAAAC-----------C-GTCC-T--AGCAGCTG-TTTTTTCAAT-GG-AGTTA-TAAA--ATT-CTCGACCGTCACTGA-CGA---TATTCAT--ACTCT-----GC--TTTCTTC----AAAAACAC---ACAC-CATGAAG-GTTATTAACGCCCTG--T---TAAAAGGAAATCTTGATACTCAT-TAAAAAA-CCCA-CATTCAATAT-ATCATT---A--AAATATCAAGGAAATATATT-GT-GAAATTT--CGTCGA---T--GT-GA-TT-A-----C-T---CGCC--GC--TATACTTGT---A----------CA-T-----------TTGTA--TAGT-AG-TTCGC-AGT---A-AT---TATAATA----G-ATGAA----TTAAATAATG-TTTATA-AT-T-TC-TG----T-CCAT--CAAATTTA----TTT-GTTTA---TAAAATT-T---AC--AAAG-TCT----------A---GTCATG-GTCTA-AT---T---TAACCA-AAAAGA---------GAGAGTTGGTT-TTTTTTCTA-T--TTGACGATACATTTA-GAAGA--T---CCACCTC-TCC-AATAA-TTACCGGTAATAAAACTCTT-TTTTTA-A-AACAA-GCAGATCAA--ATTAT---TAA-TAATA--TTT---AGCTTGG-AATGCAA-GATTCAC-TGAAACTATTAT--GCATGTTTT-TGTGCT-AT-TT-TT-ACAAT---TAT-CGA--C-CATTTCCTAAT-CCTGGTG---CGTTATAGCAGCTCTTAG-A-GTAAGGACA----ATGGGTAGT--CCATTCCACGG--CATT-CA-TGTTGG-AACT--AGACCA
gi|6 : TCATA-AT-T-TT-T---ATC-CC--------CTTA----TTTTATTTCGGATATATAT-TTAAAC--TTAT-TCT----------ATCTGACATGTATATATG---------AATCATAAGATAG--------AGGAGTATTTT-TTCTTTCTATT--TAGACGATATATTTAAAAAGA--CAAAC--CCTCTTCCCAA-AACTCACT------AAAAC---GCTTTTTATA-AAAAACGC---TTAATCA-CAT---CATGTAATC---------GCTTGGCAATGC-ACGAATCACTTGATAA--TTCTTCGC-TGTTTTGTCT-CTACTGTT-TCTACAAT---T-TTCGAGCCACGTTTCCTAAT-CCTGCTGGTTCATTATAG-AG-TCTTAGCACGT----ACA--CGAAGAGTAGTAGCCA-TCCACGGAACATTTCACTATTGTAA-CT--G-ACCAAACGCTACGGTT-AAC-CTTCTTGTCATATAAACGAAAAGGAA----G-GTCGGTAAGAATATGTT-ACTGA-AATCCGTATG-TTT---ACAAAT-CGTG-TTTCTT--ATACTTTGTAATTCGGCACATCTGACACTGCATGAC-TTACCTAAATTCTTAACTGAAT-G-CAAATGAGTTCAACTCATA---ACATATTTCCAAAA--TCCAC-GATT--TCTAGTCA-AC-A-ATAAAAGCCATTTAAAGTA---ATAA-AACATG-ACTGGGGATAAAGAAATTAGTTTTA-TTGTACTGGGTGATTCTCTTTTG------TC--CAATGTTTCAAATCGTCACGTATTGCACG--GGTCCTTAGTTTT
gi|7 : TAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GT-AAAAA----------------A-CAG-CACCGTTTTTT-AGTAATT-ACGTTGTA--AA-CA--TACATGTACCATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-A--TATA-GAAAATA--ACG-----GTA-ACTGACT-T-T--T-TTTTGTTGTATA--T---TCAGCTTAAAA-TG---G-A--GAGAATTTGG--TGCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-ACA----CAA--A----------------T-A-TTG-A--TGCAAAAA--AGT-T----GGGT-AG-TCGAGTT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA---T-TT--GA-T-------AAAAAC-----------CGGTCA-CA-AACAGCAT-TTTTTTTAAT-GA-CGTTA-TGAA-TATT-CGCGAC-GTTAT------------TTCGTTTAC-TTTCA-TGCT-TTTTCTCAAAAAACATCACAA-AGAA-CA----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTCGAATATTC-C-TAAAAAAAtca
gi|7 : AAAAAAACAAAACAT-CAATTT-ATTATTGATA--AAACATCAAGGAAA-ATGTTAGTTGAAATTT--CGCCGC---T--ATACA-TGTA-----CAT---TATC-------ACA--------------------G-T-----------ATG-A--TCGC-AT-T-AAC-AAT---GGATAA-Taaaaaaaaaaaaacaacaaacaacaacaaaaaaacaaaacatcaatttattattgataaaacatcaaggaaaatgttagttgaaatttcgccgctatacatgtacattatcacagtatgatcgcattaacaatggataattataatataat
gi|8 : taggtcgcgggtttacggaccttctcgaaaacccctcctaaaaattttacagaggtatcttgacaatgtatatactactgtgtaaaaaacagcaccgttttttagtaattacgttgtaaacatacatgtaccattgttttaacagcagcgagactgttttccgttgaattatatagaaaataacggtaactgacttttttttgttgtatattcagcttaaaatggagagaatttggtgctgttcttcttgatgatattcatatcaaaacgacacaaatattgatgcaaaaaagttgggtagtcgagttcgtttttatgaaataaagatgtcaaatttgataaaaaccggtcacaaacagcattttttttaatgacgttatgaatattcgcgacgttatttcgtttactttcatgctttttctcaaaaaacatcacaaagaacagcgttattaacgccgtgcattaataaaaggaaattcgaatattcctaaaaaaaaaaaaaaaaaaaacaacaaacaacaacT---AAATGA-TATAATA------GTAAA-----TAAATACT--TTGGTA-AT-A-TT-TG---TC-GCAT--CAAATTTA----TTT-GTTT----TAAAGAT-T---GC--ATAA-TCT----------A---GTCATGTATCTCTAT---TC-T-AACCA-AATATA----------CGAATTTTTT-TTTTTATTATTATTTGACGATACATT---T-AG-------------------AA-GA-TCATTAT----AAAAC---G-CCTTTA-ACAACAACGCAGTTCAA--A--AT---TAT-TAATAATTTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT--GT-CTAAT-TC-TT-ACAATATGT-T-CGA--CCAAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACACGACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAA-CT--GGACCAAACGCTACG--TGAAT-CTTCATGTCA-ATAAAAGGAAAACAA-----TGT-GATAATAA-A-GTT-ACCGC-A-CCCG-ATG-TTTT--ACAAATTCGCA-TTT--TTGATACAA-GTAATTCGGCA-AT-TCA-ACTG----AC-TTACTTAAATTTTAAACTGAAT-G-CAAATGTGTTCAATGCA-tataatataat
gi|9 : actaaacatttttttttttttaattaagaaatcataagaatttttcggtcgtcaattcatagattttttgttaagccatgcagtttagagattatGTAGGTGC-GCGGGTTTA--GG-ACCTTCTC--GAAACCCCGTCCCTA-AAAATTT-GACATGGGG----TAT-CTTGACAATG-TATA---TACTACTGTTGT-AAAA-TT-ATT-TTTCGATAAAACAG-CAGCCTTTTTTTAGTTATT-AC-TTGTAGAAA-CA--TAC-------ATTGTTTTAACAG----CA-G-CAGTACCATTGAGGACTGTGTTTCGCGAGTGTGTGGGTGGAGGATT-A--TATA-GAAAATA--ACGTGTGTGTA-ACTGACTGTGT--T-TT--GTTGTATA--T---TCAGCTTAAAAGTG---GGA--GTGAATTTGG--TGCT--GT---G-TT-CTTTATGACT-ATT---------CATATT-----CAAAA---CG-AAA----ACA--AAACAAT-TTTGAAAAAT-A-TTG-A--TCCGAAAAACAATGT-ATTGGG--AGTTCGAGCT-CGTTTTT---ATGAATAT-AAAGATG-T--CAAA-GTT-TT--GA-TAA-----AAAAAC-----------T-CTCG-CTGAGCAGCAG--TTTTTAAAT-GATCGTTATTGAA-TATT-CGC
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): AAGTTTCTTCATCATTTTCGCATTTTCGAATGTTAAAAAAATGTGCATGCATACAAAAGACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGGGCAGGGTGAATGTGACCGAAAACTCTTGTGACTAGCGAAGATGAAAAAGACGGAATAAACAAGTGATTCATACACATCCGAAAAATATTAAGATCAATTTTTAACATTATATTTTTGCCAGTATCGACTTTGAATCGGTTTGCTCATTTTTCAAAATCAAATGGCCTTTTTCCCCAATGAATTATTTGCACAGGTGCGCCATAATGCAATATACCGACAGTGGTGAAATCCGGGTGAACATTGTGTAATGTCACTATAACAATAGATTTTTGCCTAGTATGGTAAAGGAAGAACGAAAGAACGTGTTTGGCGATTTCTAATGCAAGTTTTAAAATATTATCAACGTAGAAAAGAAGATAAGTTTGTCTATCCCAAGATAAGAAATGATAAAACATGTATAAGGTAACGAAACTGTTTGTGTCATTGTATCATGCCTCTAGTGTCCGTTTCTGTAACCTTGTCTGTATTTATGGCAAATACAGATAATACTGTACCAATGCATATCATAGTGCATAATAAACATTGTGATTTTACAATTAAAGCATGTGACGAGTTTAGTTTTCTCGTTTATTATTAAATTTATTGTTTGTGATCAAAAATGAAAACCATACTGTGCATAATATATTAAAGTGTATTTTATCCGTCTCTCTTTGTCTGAAAATTTTAAAGAGTGTTCTGCTAATACGCGTCAAATTTCCTGAATAAAACCTTTAAAGTGCCCCACATGGTCTCCCCTTTCTAACTTTTCTCCGTAAAAGATTGCACCCAGCTTCATATTTTTCCCGAAAACTGTCGCTGTTATTACTTTATCATATAAATTCATCTGCCTTGCGTCGAAATGAAAGGATAGACTTTACGATAGTAAACGAAAACATTGATACTATCTAAAGCATGATTAAAGCAATTTGTTGTT
Unaligned ( gi|11 ): CCATTTGGTCCTGAAGAAATTTTAGAGTGTCCGCTACATACGCGTCAAACTTTCTGAATAAAACTTAAAAGTGCATGGATCTCCTGCCTAAATTTTCTGCTAAAGTTGTCAGCCTGTCTTCGCTTTCCCCCAAAATTGTCCGCTTTTAGACTTCATAAAATTAAAGGGACTGGAAACGCGTTATCTCAAAAGTTTTGCATCGGAAAACGAAAGGCGAAGACTTACAAACTTAAATGAAACCTGATATCACCTTCAATATGGTAAAAGCAGCTGTTGTTAATAGTTCATAATTGAGTATCATCGGTAATTTTAATTTTTACGCCTCCTTTCTATCAACGCAATTGACGTCACAATGAAATGTACACACGAACCAAAAGATTCGACGCGTTAGATTTTGCGTTACCCCAAAATCGCTGACGTAGGCAAACCCGCGACCTACGTTATAAATCATAAAGTCGCAA
Unaligned ( gi|15 ): TCTAAAGTGCTATGAGTCTCCTGGCCTAATTTTCTGTAAAGTTTGGGTGGACATGTCAGAATAAAAGGGATGAAACGTGAACTATCTCAAGTTTTGCATTGGAAACGAAAGGAAGACATTCGAAATGAAACGAAACCTTAATATACCTCAGTATGTTAAAGCAGCTGTAGTTAATACTCATAATTAATATCGGTAATTTTTTACGCTCTTTATCATCAGTCAATACTATCAACGCAATCGTTACGTCACCATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGAAATGCGTACCCCAAAACCGTGACGTAGGCAAACCCGCGACCTACGTTA
Unaligned ( gi|16 ): TTTGCATCGGAACTGAGTCCCAAGGAAGACTTAATCGAGAAATAAGAGCGAGAACCTTGATTATACCCTCTTTGGTGTAATGCTGGTTTTAGGAGGCCTAAACAGGCAGCCTATTTGTTAATATCTAAAGTGCATATCGGTAAAGTTTTTACGCTCTCTATCATCAGTCAATCTATCAAAGAATTGCTTACGTCACAATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGGATTTTGCGCCCGGTACCCACAAAACTGCCGCTGTTACGTAGCCGAAAAACGCTGCGACC
Unaligned ( gi|17 ): TAATGAAAAAGAAAAAAAGTACAGAAATATTTGTAAAACATTCTGGAAAATTCTTTCCATGGCCATGTAGTAATATGATATGTTTGTATTCAAAATATAGACATGTATATAAAGCTACTAAATTAGATCACAATCTTACCCGCTTCAATGGTATTGACTATGGGTTAATATTTCAGTTTCCCCGGAACCTTCTCACAGTAATAAGGCAAACGATTTAAGTATCAATTAATAATCTTATTATATTCTTTTTACATCACTTTCCACCCAT
Unaligned ( gi|20 ): CCTCTGTAAGAATTGATATTATAACAGGATGGAATGCTTACCTCGAATTTTGCATCGGAAACGGAAGAAAAGACTCTTAGAAAATTAAACGAAGCATGATATATTTCAATATGATGAGATAATTTAAATTTAAACGCTTATAAATCTATTCACTACGCTAATTGTTACATGACCTACTCACAATGAAATGTGCACGAAAAAAGACCAATCGTAA
Unaligned ( gi|21 ): CAAATATTTTCCCATCGGAATCGAAAGGAAGCAAAATTAAATGAAACATATTCATATCGGTAAAAAATTGAAATCTTTATTATCTATGCACAACATAAAGGCAATTGTTACGTCACAATTGAAAGTACACAGAAAAAGACGTCGAGTCGTAAGATTTGCGTACCCCAAAGCCGTGACGTAGGCAAACCCGCGACCTACGTTAAACTATAAAT
Unaligned ( gi|25 ): TATTGCGTTAACGTAATTTCAACCAAAAATGACATTTTGACAACTCATTTTACCACATCAGAAATGAATGAAAGGATAAATGATAGGGGCTGGGATCATGCTCCATGTCTCTAGTGCATGTGATCTGTACCCTTGTTTGTATATGAA
Unaligned ( gi|29 ): CGAACTAAATTTTTTTTTATTAAGAAATCATAAAAAAATTTCGTCCAATCATAATTGTTGTTAAGCCATCAGTTGAAAGATTATTAAATGATAGTGAAATAAAA
Alignments
lowQualScore : 1 1111 1 1 2222222 2222 333333333 222222222222 11 11 11111 1 1 1111 111 111 222222222 111111 1111 1 1111111 2222222222222 11 1111 111 1111 111 11111 111111 444444444444444444444444444444444 44444444444444 11 111 1111 11111 22222222222222 222222222 33333333333 1111 7777777777777777777777777777777777777777777777777777 1 11111 111 22222222 1 11 111 11111 111 1 1111 2222 11 11111 1 333333 111 11111 2222 11 1 11 111 1 5555555555555 1 1 1 444444 11 11 1111111 1111 3333333 1 1 1 44444444444444444 11 222 1 1 1 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 22 1 222 1 33 33333
lowQualScore : 4 4 4 4 55 2 4 5 0 5 5555 5 5 888 5 0 55 5 5 0 5 5 1 0 1 1 77 5 77 0000000 2222 5 5 777777777 5 999999999999 55 77 5 33 44444 5 5 5 77 1 77 4 2222 5 000 5 77 77 77 000 5 5 5 000000000 999999 888 5 0000 66 4 4 1 4 4 4 4 55 3 55 3 3 0 3 3 4 777 4 66 4 55 4 4 4 55 4 8888888 2222222222222 55 5 5 4 4 4 4 4 4 5 5 1 11 1 0 5 88 0000 66 555 5 0000 777 3 666 5 5 3 5 0 66 5 9 66 3 66 4 11111 4 777 555555 55 555555555555555555555555555555555 6666 4 4 4 4 4 777 4 11111111111111 5 11 4 000 4 999999 66 2 9999 4 3333 4 11111 66 5 66666666666666 111111111 77 33333333333 8888 0 1111 1 4444444444444444444444444444444444444444444444444444 5 3 666 99999 444 8 22222222 8 6 0 99 99 6 44 6 3 6 6 6 111 6 6 99999 1 6 444 6 88 8 8 7777 5555 1 11 8 88 8 88 0 22222 3 2 0 2 8 8 777777 8 8 6 6 6 6 6 6 6 99 555 6 66 7 6 6 88 8 77777 8 8 8 8 3333 2 22 0 22 777 0 8 9 6 1 4444444444444 2 0 1 3 0 0 2 2 0 33 222222 11 8 0 3 33 8 0 4444444 9999 8 8 8 999 0 1111111 8 8 88 8 8 8 1 8 0 0 0 77777777777777777 3 3 33 66 111 3 7 7 3 3 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 00 3 555 0 3 6 7 6 7 7 11 55555
lowQualScore : . . . . .. . . . . . .... . . ... . . .. . . . . . . . . . .. . .. ....... .... . . ......... . ............ .. .. . .. ..... . . . .. . .. . .... . ... . .. .. .. ... . . . ......... ...... ... . .... .. . . . . . . . .. . .. . . . . . . ... . .. . .. . . . .. . ....... ............. .. . . . . . . . . . . . .. . . . .. .... .. ... . .... ... . ... . . . . . .. . . .. . .. . ..... . ... ...... .. ................................. .... . . . . . ... . .............. . .. . ... . ...... .. . .... . .... . ..... .. . .............. ......... .. ........... .... . .... . .................................................... . . ... ..... ... . ........ . . . .. .. . .. . . . . . ... . . ..... . . ... . .. . . .... .... . .. . .. . .. . ..... . . . . . . ...... . . . . . . . . . .. ... . .. . . . .. . ..... . . . . .... . .. . .. ... . . . . . ............. . . . . . . . . . .. ...... .. . . . .. . . ....... .... . . . ... . ....... . . .. . . . . . . . . ................. . . .. .. ... . . . . . ............................................................................. ......... .. . ... . . . . . . . .. .....
lowQualScore : 0 0 0 0 55 0 4 0 0 0 6666 0 0 888 0 4 44 0 0 1 0 0 2 1 4 4 99 7 99 7777777 1111 7 7 111111111 7 333333333333 77 44 7 66 33333 7 7 7 99 4 99 1 1111 7 000 7 99 99 99 000 0 0 0 000000000 444444 888 0 6666 99 0 0 3 0 0 0 0 55 9 55 6 6 5 6 6 0 000 0 44 0 55 0 0 0 55 0 5555555 7777777777777 00 1 0 4 4 4 4 4 4 0 0 4 44 4 1 7 77 6666 99 666 0 6666 555 6 222 0 0 4 0 1 99 0 8 11 2 11 4 11111 4 888 111111 55 555555555555555555555555555555555 1111 0 4 4 4 4 000 4 00000000000000 0 99 4 222 4 000000 11 6 4444 4 9999 7 33333 11 0 66666666666666 111111111 11 11111111111 7777 3 8888 7 4444444444444444444444444444444444444444444444444444 0 2 666 00000 000 0 22222222 0 0 8 22 22 7 00 7 2 7 7 7 777 7 7 77777 0 7 000 0 88 0 0 0000 4444 4 00 0 88 0 88 8 66666 2 5 0 5 0 0 666666 0 8 7 7 7 7 7 7 7 22 555 7 88 2 7 7 88 0 88888 0 0 0 0 8888 5 55 0 55 555 0 8 8 5 2 0000000000000 5 0 0 2 0 0 5 5 2 55 555555 00 0 8 2 66 0 8 6666666 0000 0 0 0 222 8 2222222 0 0 66 0 0 0 0 0 0 0 0 55555555555555555 2 2 88 55 111 3 3 3 3 3 00000000000000000000000000000000000000000000000000000000000000000000000000000 777777777 00 3 000 7 3 7 3 7 3 3 77 77777
consensus : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAA-TAAT--TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATT---A-AAGAT---CCACCTCTTCC-AA-AA-TCAC---TA-A--AAACGC--TTTTTAACAACAACGCAGTTCAA--AT-AT---TAT-TAATA--TTT---AGCTTGG-AATGCA-GATTCACTTGAAACT--TCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAAN-TCCAC-GATTC-TC---TCA-ACACATAAAAGCTATCTAAAGTAC-TGTAA-CGT-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTC----TCGTC--CAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAA-AAA-G-C-GCATGAACCGC-CA--TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GC---C-T-CTTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
Reference ( family-200 ) : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAA-TAAT--TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATT---A-AAGAC---CC--CTCTTCC-AA-AA-TCAC---TA-A--AAACG---TTTTTAACAACAACGCAGTTCAA--AT-AT---TAT-TAATA--TTT---AGCTTGG-AATGCA-GATTCACTTGAAACT--TCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAAC-TCCAC-GATTC-TC---TCA-ACACATAAAAGCTATCTAAAGTAC-TGTAA-NAC-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTC------TCGTC--CAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAA-AAA-G-C-GCATGAACCGCGCA--TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GC---C-T-CTTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
gi|1 : ACGTAGGG-C-GCGGGTTTA-CGGGACCTTCTC--GAAA-CCCCTCC-CG-AAAATTTTGACA-GAGGAGATTATTCTTGACAATG-TATA---TACTACGGT-TTAAAAAATT-ATT-TTTCGATAA--CAG-CACCGTTTTT--AGTAAT--ACGTCGTA--AA-CATTTAC------CATTGCTTTAATAG----CACG-C---------GAT-ACTGTATGCCG------------TTGATTATT--TATAGGAAAATAT-ACG-----GTG-ACTGACT-T-T--T-TC--TTGGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATGTGGTTTGCT--GT---TCTT-CTTGATGA-TGATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-T---GAAAAT-A-TTTG-A--TGC-AAAA--AAT-T-ATGGGGTCAG-TC-AGCT-CGTTTTTTGAGTGAA-A--AAAGATGCT--CAAT-G-T-TT--GA-T-------AAAAAC-----------C-GTCACC-AGTAGCTGTTTTTTTAAATGGA-CGTAA-TTAAATTATT-CGCGAC-GTCAT-GAACGACGTGATTCATTTACTTTTCATTGCCGTTTCTTC----AAAACATCAC---AGAA-CA----GCGT-ATCA-CGCCCTGCAT---TAAAAGGAAGT--GAATACGCATAAAAAAAAAACCA-CAT-CAATTTAATTAATTATA--AGATATCAAGGAAA-ATGTT-GTTGAAATTTTCTGTCGAAAGTTGGTAGATTTTA-----C-T---CGCC--GC--TATACA--TGTT--A----------T-T-----------ATG-GATTCGCTAG-T-AAAC-AAT---AGATAA-TGGTAT-----T-ATGAAT-AATTAAA-TAAT--TTTTATAATCA-TTCTGTAA---CCAT--CA---TTA----TTT-GTTT----TAAAAAT-----AC--ATTG-TCT----------AA--GTCATGTATCTATAA---TT-CTAACCA-AAA-GA---------CAGAGG-TGTTTTTTT--CTATT--T-GACGATACATT---AGAAGAT---CCACCTCTCTC-AA----TT-T---TA-A--AAA----------AA-AACAATG---TTCAA--AT-ATAGAGAT-AAGTG--TGTGAGAGGTTGG-AATGCA-GATTCACTTGAAACT--TTT--GT-TGTTTT-TGT-CTAAT-TTCTC-ACAAT---T-T-CGA--C-CAAGTCCTAAT-TCTATTG---CGTTATAGTAG--CTTAG-A-GT----ACAG-ACATGTGTAGT--CCA-TCAACGGA-CATT-C--TGTTGGAAA-T--GGACCAAACGCTA----------TCCATGCCA-ATAAAAGAAAAAAAA-----TGT-GTTAATAA-A-GTTAACCGC-A-TCCG-ATGTTTTT--ACAAA-----G-GTTC-TTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----ACTTTACTTTAATTCTAACCTGAATGG-CAAATGCGTTCAACGCA-A----ATATTTCCAAACTTCCACGGATTCGTC---TCACACAAATTAATGCTATCTTAAGT--------------AGTGGGAG-GAAGATATTAGTTTTATTT-TACT-AATAATTTTC------TCAGCGTCAAT-TTTC-AATCGCCACGTAGTGCACGTTGGTTC-TAGTTTTCAAAAAT-G-AAGCGTG----C-CTCTAGAA-AAAGG-C-GC-TGAACCGCCCA---TTTTAA-GCGCA-TGAG-AAAGTGAAT-AAGCGATGCACGCC-GAAACAATAGTGCACTC-A-ACACCCCC-CCCC-CCCG---C---GC---CAT-CTTTTGAATTG----CTC--CATGGTA-CCATTTTTTTT-TTCAATTGCA--TTACTTCGTTAAAATTTGAGCTG-GTTCGAATT
gi|1 : taAAATTATGTAAGAAA--AAGAAAAGAAAGAAAAATTTGTGAATACACG--CACTG-TTCCTCTGT-TATGTGTCTGTATTC-AAATACATATAAAT-AAGC-----ATCACTTCATTatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaaattatgtaagaaaaagaaaagaaagaaaaatttgtgaatacacgcactgttcctctgttatgtgtctgtattcaaatacatataaataagcatcacttcattggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|10 : taacgtagggcgcgggtttacgggaccttctcgaaacccctcccgaaaattttgacagaggagattattcttgacaatgtatatactacggtttaaaaaattatttttcgataacagcaccgtttttagtaatacgtcgtaaacatttaccattgctttaatagcacgcgatactgtatgccgttgattatttataggaaaatatacggtgactgactttttcttggtataattcagcttaaaatggagagaatgtggtttgctgttcttcttgatgatgattcatatcaaaacgaaacaaaaacaattgaaaatatttgatgcaaaaaattatggggtcagtcagctcgttttttgagtgaaaaaagatgctcaatgtttgataaaaaccgtcaccagtagctgtttttttaaatggacgtaattaaattattcgcgacgtcatgaacgacgtgattcatttacttttcattgccgtttcttcaaaacatcacagaacagcgtatcacgccctgcattaaaaggaagtgaatacgcataaaaaaaaaaccacatcaatttaattaattataagatatcaaggaaaatgttgttgaaattttctgtcgaaagttggtagattttactcgccgctatacatgttattatggattcgctagtaaacaatagataatggtattatgaataattaaataatttttataatcattctgtaaccatcattatttgttttaaaaatacattgtctaagtcatgtatctataattctaaccaaaagacagaggtgtttttttctatttgacgatacattagaagatccacctctctcaattttaaaaaaaaacaatgttcaaatatagagataagtgtgtgagaggttggaatgcagattcacttgaaacttttgttgtttttgtctaatttctcacaatttcgaccaagtcctaattctattgcgttatagtagcttagagtacagacatgtgtagtccatcaacggacattctgttggaaatggaccaaacgctatccatgccaataaaagaaaaaaaatgtgttaataaagttaaccgcatccgatgtttttacaaaggttctttatacatgtaattcggcaattgaactgactttactttaattctaacctgaatggcaaatgcgttcaacgcaaatatttccaaacttccacggattcgtctcacacaaattaatgctatcttaagtagtgggaggaagatattagttttattttactaataattttctcagcgtcaattttcaatcgccacgtagtgcacgttggttctagttttcaaaaatgaagcgtgcctctagaaaaaggcgctgaaccgcccattttaagcgcatgagaaagtgaataagcgatgcacgccgaaacaatagtgcactcaacaccccccccccccgcgccatcttttgaattgctccatggtaccattttttttttcaattgcattacttcgttaaaatttgagctggttcgaattatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAACAAT-TT-GAAAAAT-A-TT-A-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------A-GTCAC--AGCAGC---------A--------GTTA-T-GAAT-ATT-CGCGAC-GTTATTGAACGACCTTATTCGTTTACTTTTCAT-G------------------CATCAC---AGAA-CG----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTAGAATATTCATAAAAAAAAC-CCA-CAT-CAA--TA--TATTTATA--AAATATCATGGAAA-ATGTTAGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--TA--CAT---G----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---GGATAATTATAATA----TAATAGT--AATTAAA-TAAT--TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAAATTA----TTT-GTTT----TAAAGAT-T---GC--ATAG-TCT----------A---GTCATGTATCTATATATATT-CTAACCA-AAAAGACCAAAAAAGACGAGTACTTTATTTTTCCTA-T--TTGACGGTACATT---ggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|12 : GTAG-T-C-GCGG-TTT--CGG-AGCTTCTCATGATATACCCTCC-TATAAAATTTTGCCA-GGGG----TAT-CT-GACAATGATATA---T-CTACTGT-GTATAAA-TA-ATT-TTTCGATAAA-TAG-CACCG---TTTTAGTTATTAACGTTGTA--AC-AAT--AC------CATTGTTTT-ACAGTCA-CA-GACCTATG----GAG-ACTGATTT-CA------------TT-A--ATT-TTATAG-AAAATA--ACG-----GTACACTGACT-T-TTCT-TT--TTTGTTTGGTAT----AGCTT-AAA-TGGTCG-A--GA-AATTTGGT--GCTAGGTGTATCTT-CT--ATCA-T--TTAGCGTCAGGCATATGCGCGATAAGAGACCGTAAACGACCAG--AAACCATGCT-AAACAATCA-TT-G-GATTGCCAAAA--AAT-TAATGGGGA-TG-CCGAGCTCCGTTTTT---ATGAA-AT-AAGCATG-TTCCAGA-G-TGTT--GACT-------AAAAAC-----------CTGTCtaga
gi|13 : aaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGA----TAT-CTTGACAATA-TATA---TACTACTGT-GT-ACAT-TT-TTT-TTTCGATAAA-CAG-CACCG--TTTTTAGTAATT-ACGTTGTA--AA-CAT--AT------CATTGTATTAACAGTGCTCA-G-C---------AAG-ACTGCTTTCCA------------TTGG--ATT-ATATAG-AAAATA--ACG-----ATA-ATTAATT-T-T--TGTT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGCT--GCT--GT---TCTT-CTTGATGA-T-ATC---------TATAT------C-TAA---CA---------AA--AAACAAT-TT-G-AAAAT-ATTT-G-A--TGC-AAAA--AAT-T-AT-GGGT-AG-TCGAGCT-CGTTTTT---ATGAA-TA-AAAGATG-T--CAAA-G-T-TT--GA-TAAAAAAAAAAAACCAAAAAAAACAC-GTCAC--AGCAGCTGTTTTg
gi|14 : ta----AA--CATCAC---AAAAACA----ACGTTACCAACGCCCTGCAT---TGAAGGAAAATTCGAACATTCAT-AAAAAAAC-CCA-CTT-CAATTCA-TTATTTACA--AAATATCAAGGAAA-CTCTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----A-T---CGCCTATA--TA--TA--TGT---A----------TATAAATGGTAATAATG-A--TTGC-AG-T-AA-C-AAT---AGATAA-TAAAATA----T-A-AAAGTAATTAGATTAAT--TTT-GT-AT-A-TT-TG-AAT--CCAT--CGAAATTA-----TT-GTTA----TATA----T---AT--ACAG-TTTTTTTTTCTGAA---CTCATTTTTCTTTTT---TT-TT--------AAGG---------AGTATT-TTTCTTTTTTTC
gi|18 : aaaAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTGT-AAACG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCATCTACTTTTCAT-GCC-TTTCTTC----AA--CATTAC---AGAA-TA----TCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAA-CCT-CAT-CAAT----TTATTTAAAAGAAATGT----GAAT-ATGTTT-TTCAACTTTC--ATatccatcaattcccctctt
gi|19 : TG-A-CGTTA-T-AGAT-ATTGCGCGAC-GTCATTGAACGACGTTATTCATTTTCTTTTCAT-GCC-TTTCTTC----AA--CAACACCATAGAA-CA----GCGTTATTAACACCCTGCAT---TAAAAGGAAATTCAAATACTCATTAAAAA----CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATATTTGTAGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---GGCC--G---TA--TA--------------------AT-----------ATT-G--TCA-------AA-C-AAT---AGac
gi|2 : AACGCTTCATGTCA-ATAAAAGAAAAAAAAAAATGGGT-G-TAATAA-A-GTT-ACCGCGA-TCCG-ATG-TTTTTAACAAA--AGTG-TTTCTTT-ATACCT-GTAATACGGCA-AT--GA-ACTG-----C-TTACTTAAATTCTAACTTGTAT-GGCAATTGCGTTCAACGCA-AAT--AAATTTCCCAAC-TCCAC-GATTC-TC---TCA-ACACAT-AAAGCTAT-TGAAGTACATGTAA-TGTAGAGT--GGG-AAAGATATTAG--TTA-TT-TA-TGAGTGATTCTCTCGAGTTCGTC--CAAT-TTTCAAAATG-CACATATTGCACG-TGAGTC-TAGTTTTCAAAAATCAAAAGCGTGC---CTCTCTAGAATGAA-G-CGGCATGAACCG-GCACTTTTTTAAGGCGCACTGAGAAAAGTGAATGAAACG-TG-ACGCCAGTAACAAT-GTATACTCAA-ACGCCCCC-CCCC-TTC----C---TC---T-T-C-TCTTAATTGATCTCTTCCCATGGT-TCCA--TTTTTTACTC-ATTTCATTTTACTTT-TTAAAAATGTAGTTGTTTTCGA
gi|2 : AAACTACTAAATTAAAATAATG-----AAGAAAGAAA--AAAGAAAAATTTGTAAA-ACACGCTCGCTG-AT-CTCTGTATAT-TGTCTGTATTAAAAATACAGATAGAATAAGCCCCATATCACTTCATTcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaactactaaattaaaataatgaagaaagaaaaaagaaaaatttgtaaaacacgctcgctgatctctgtatattgtctgtattaaaaatacagatagaataagccccatatcacttcattgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|22 : aacgcttcatgtcaataaaagaaaaaaaaaaatgggtgtaataaagttaccgcgatccgatgtttttaacaaaagtgtttctttatacctgtaatacggcaatgaactgcttacttaaattctaacttgtatggcaattgcgttcaacgcaaataaatttcccaactccacgattctctcaacacataaagctattgaagtacatgtaatgtagagtgggaaagatattagttatttatgagtgattctctcgagttcgtccaattttcaaaatgcacatattgcacgtgagtctagttttcaaaaatcaaaagcgtgcctctctagaatgaagcggcatgaaccggcacttttttaaggcgcactgagaaaagtgaatgaaacgtgacgccagtaacaatgtatactcaaacgcccccccccttcctcttctcttaattgatctcttcccatggttccattttttactcatttcattttactttttaaaaatgtagttgttttcgacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGCAAGTTC--GTCCAAAGT--GTAGACGT-AAGTAAC-TGAACGA---GCA-TA--CA--T-----A----------TAT-----------ATG-T--TAGC-GGCT-AT-CGAATTTCAGAGAT-CCTAGTA------GTAAG-----TAGA-TCAT--TTT-ATAAT-GTTT-TG-AATCGCCATTCCAAGATGAAAAGTGT-G-TT----TAAAGTT-G---ACGAATAGTTCT----------A---GGTAGGTATgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|23 : TTTTCAAAA-T-GAA-GCGTGC---C--TCTAGAA-AAA-G-C-ACATGAACCGC--A--ATTTTAA-GCGCACTGAG-AAAATGAAG-AAACA-TGCATGCC-GAAACAAT-GCTCACTC-A-ATACCCCCACCCCACCCCCTGC---GC---C-TCCTTTTTAATTGATCTCTT--CATGGTATCCA--
gi|24 : ttt-CTTGATGA-T-ATT---------TATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCAAAAA--AAT-T-ATAGGGT-AG-TCGAGCT-CGTT--------------------TG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCATCTGTTTTCT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTC
gi|26 : TC--CAAT-TTTCAAATCGCCACGTATTGCACG-GTGTCC-TAGTTTTCA-------------------C-CTCTAGAA-AAA-GGT-GCATGAACCGA--A--TTTTTAA-GCGCACTAAG-AAAGTGAAT-AAACC-TGCACGCC-GAAACAAT-GTTCACTC-
gi|27 : CGTAGGT-C-GCGGGTATA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----CAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCG-TTTTTTAGT
gi|28 : --TA--CA--TTTGCGA----------TA------------ATG-A--TCGC-AG-T-AA-C-AAT---AGACAA-TATAATA----T----AA--TAGTAAA-TAAT--TAT-TTCGT-T-CT-TG-AATC-CCAT--CAAGGTTA----CAT-GTAT----TAGTCATGT---AC--ATA
gi|3 : cgtgtaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCCC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTTGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ATG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTCGATCAGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AC-AAAGATG-T--TAAT-G-T-TT--GA-T-------AAAAAC-----------T-GTCAC--AGCAGCAGTTTTTT-AAATG-A-CGTTA-A-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCATTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-TA----GCGTTATTAACGCCCTGCAT---TAAAATGAAATTCGAATACTCATTAAAAACCC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCAC-AG-T-AA-C-AAT---AGATAA-TATGATACTTGT-ATAAAGGAATTAAA--AATAATTT-ATAAT-A-TT-TG-AATC-CCAT--CAAAA-TA----TAT-GTTT----TAAAGAT-T---AC--ATAG-TCC----------A---GTCATGTATCTATAT---TCATTAACC--AAAAGA---------ACGAG-------TTTTTTCTATT--TTGACG---CAT---------------C--CTCTTCC-AA-AA-TC------A-A--AAACG---TTTTTAACAACAACGCAGTTCAA--AA-AT---TAT-TAATA--TTT---AGCTTGG-AATGCA-GATTCACTTGAAACT--TCT--GC-TG-TTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAATACTTGTTG---CGTTATAG-AG-TCTTAA-A-GT----AC---ACATGAGCAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACTCGGAACCAAACGCTACG-TGAAC-TTCCATGTCA-ATAAAAAAAAAAAAA----CTGT-GTTAATAA-A-GTT-ATCGC-A-TCCG-ATG-TTTT--ACAAATTCGTA-TTTTTTTTATACAT-GTAATTCAGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-TAAATGCGTTCAACGCA-ATCTTATATTT--AAAA-TCCAC-GATTC-TT---TCA-ACACATAAAAACTATCTAAAGTACTTGTAATGAT-GAGTGGGGG-AAAGAAATTAGTTTTA-TT-TGCTGAGTTAT--TC------TCGTC--CAAT-GTTCAAATTGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTACGTTC-CTCTAGAA-AAA-G-C-GCATGAA--ACACA--TTTTTAA-GCGCACTGAG-AAAAGGAAG-AAACG-TGCATACC-GAAACAAT-GTTCACTC-ATATACCCCC-CCCC-TCC----CTTGGCCTTC-T-TTTTTTAATTGATCTCTT--AATGGTATCCA---TTTTC-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTATAATTATG-----AA--AAGAAA-GAAAGAAATATTTGTACA-ACAC---CACTGTTTCCTCAGTATTTGTGTCTGTATTCAAAATACATAT-AA--AAGC----TATCACTTCATTtacatgt
gi|30 : AAAAA-A-GTT-GCCAA-A-TCCG-ATG-TTTT--ACAAATTTGTATTTTTTTTTATACAT-GTAATTCGGCA-A
gi|31 : T--GTAGATTT-A-----C-T---CGCC--GCTATA--CA--TGT---AAAATATACCGTAT-----------ATG-A--TCGC-A
gi|32 : --TTT--GC-TGTTTT--GT-CTAAT-TT-TC-ATAAT---T-T-CGAT-CA-AGTTCCTAAT-
gi|33 : ACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-
gi|34 : TAGGT-C-GCGGGTTTA-CAG-ACCTTCTC--GAAAA-CCCTCC-T
gi|35 : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--
gi|5 : tttaCGTAGGT-CCGCGGGTTTAACGG-ACTTTC-----GAAACCCCTC--TG-AAATATT-GACA-GAGGG---TA--CTTGACAATG-TATAATATACTACTGT-GTTAAAA-TTTATTATTTCGA--AA-CAGGCACCGCTTTTTTAGTAATTCACGTCATA--AAACAT--AC-------ATTGTTTTAAC-G----CA-G-C---------GAG-ACTGTTTCC--------------TTGA--ATTTATAT-G-TAAATAGTAAG-----GTG-ACTGACT-T-T--TACT--GTTG-ATA-TTC----AGCTTAAAA-TG---G-ACAGAGAATTGGTT--GCT--GT---TCTTACTTGATGA-T-ATG---------CATAT------AAAAA---CA-AAA----CAACAAAACAAT-TT-GGAAACT-A-TT-GCA--TGC-AAAA--AAT-T-ATGGGGT--G-TCGAGCT--GTTTTT---ATGAA-ATTAAAGATG-T--CAAAAG-T-TTTGGA-T-------AAAAAC-----------C-GTCCT--AGCAGCTGTTTTTT-CAATG-G-AGTTA-T-AAA--ATT-CTCGACCGTCACTGA-CGA---TATTCAT--ACTCT-----GC--TTTCTTC----AA--AAACAC---ACAC-CATGAAG-GTTATTAACGCCCTG--T---TAAAAGGAAATCTTGATACTCATTAAAAAA-C-CCA-CATTCAATATA-TCATT---A--AAATATCAAGGAAATATATT-GT-GAAATTTC--GTCGA---T--GT-GATT--A-----C-T---CGCC--GC--TA--TACTTGT---A----------CAT-----------TTGTA--TAGT-AG-TTCG-C-AGT---A-AT---TATAATA----G-ATGAA----TTAAA-TAATG-TTT-ATAAT-T-TC-TG----T-CCAT--CAAATTTA----TTT-GTTTA---TAAAATT-T---AC--AAAG-TCT----------A---GTCATG-GTCTA-AT---TT---AACCA-AAAAGA---------GAGAGT-TGGTTTTTTTTCTATT--T-GACGATACATTTA-G-AAGAT---CCACCTCT-CC-AATAA-TTACCGGTA-ATAAAACTCTTTTTTTAA-AACAA-GCAGATCAA--ATTAT---TAA-TAATA--TTT---AGCTTGG-AATGCAAGATTCACT-GAAACTATTAT--GCATGTTTT-TGTGCTA-T-TT-TT-ACAAT---TAT-CGA--C-CATTTCCTAAT-CCTGGTG---CGTTATAGCAGCTCTTAG-A-GTAAGGACA----ATGGGTAGT--CCATTCCACGG--CATT-CA-TGTTGG-AACT--AGACCA
gi|6 : TC-ATAAT-T-TT-T---ATC-CC--------CTTA----TTTTATTTCGGATATATAT-TTAAAC--TTAT-TCT----------ATCTGACATGTATATATG---------AATCATAAGATAG--------AGGAGT-ATTTTTTCTTTCTATT--TAGACGATATATTTAAA-AAGACAAACC--CTCTTCCCAA-AACTCAC---TA-A--AA-CGC--TTTTTATAAAAAACGC---TTAATCAC-AT---CATGTAATC---------GCTTGGCAATGCACGAATCACTTGATAAT--TCTTCGC-TGTTTTGTCT-CTACTGTT-TCTACAAT---T-TTCGAGCCACGTTTCCTAAT-CCTGCTGGTTCATTATAG-AG-TCTTAGCACGT----ACA--CGAAGAGTAGTAGCCA-TCCACGGAACATTTCACTATTGTAA-CT--G-ACCAAACGCTACGGTTAAC-CTTCTTGTCATATAAACGAAAAGGAA----G-GTCGGTAAGAATATGTT-ACTGA-AATCCGTATG-TTT---ACAAAT-CGTG-TTTCTT--ATACTTTGTAATTCGGCACATCTGACACTGCATGAC-TTACCTAAATTCTTAACTGAAT-G-CAAATGAGTTCAACTCATAAC--ATATTTCCAAAA-TCCAC-GATT--TCTAGTCA-ACA-ATAAAAGCCATTTAAAGTAA-TAAAA-CAT-GACTGGGGATAAAGAAATTAGTTTTA-TTGTACTGGGTGATTCTCTT----TTGTC--CAATGTTTCAAATCGTCACGTATTGCACG--GGTCCTTAGTTTT
gi|7 : TAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-----------------A-CAG-CACCGTTTTTT-AGTAATT-ACGTTGTA--AA-CAT--ACATGTACCATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TTTTGTTGTATA-TTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-ACA----CAA--A----------------T-A-TT-G-A--TGCAAAAA--AGT-T----GGGT-AG-TCGAGTT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA---T-TT--GA-T-------AAAAAC-----------CGGTCACA-AACAGCATTTTTTT-TAATG-A-CGTTA-T-GAAT-ATT-CGCGAC-GTTAT------------TTCGTTTAC-TTTCAT-GCT-TTTTCTCAAAAAA--CATCACAA-AGAA-CA----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTCGAATATTC-CTAAAAAAAtca
gi|7 : AAAAAAAC-AAAACAT-CAATTTA-TTATTGATA--AAACATCAAGGAAA-ATGTTAGTTGAAATTTC--GCCGC---T--ATACATGT-A-----CAT---TATC-------A--CA--------------------GT-----------ATG-A--TCGC-AT-T-AA-C-AAT---GGATAA-Taaaaaaaaaaaaacaacaaacaacaacaaaaaaacaaaacatcaatttattattgataaaacatcaaggaaaatgttagttgaaatttcgccgctatacatgtacattatcacagtatgatcgcattaacaatggataattataatataat
gi|8 : taggtcgcgggtttacggaccttctcgaaaacccctcctaaaaattttacagaggtatcttgacaatgtatatactactgtgtaaaaaacagcaccgttttttagtaattacgttgtaaacatacatgtaccattgttttaacagcagcgagactgttttccgttgaattatatagaaaataacggtaactgacttttttttgttgtatattcagcttaaaatggagagaatttggtgctgttcttcttgatgatattcatatcaaaacgacacaaatattgatgcaaaaaagttgggtagtcgagttcgtttttatgaaataaagatgtcaaatttgataaaaaccggtcacaaacagcattttttttaatgacgttatgaatattcgcgacgttatttcgtttactttcatgctttttctcaaaaaacatcacaaagaacagcgttattaacgccgtgcattaataaaaggaaattcgaatattcctaaaaaaaaaaaaaaaaaaaacaacaaacaacaacT---AAATGA-TATAATA------GTAAA-----TAAA-TACT--TTG-GTAAT-A-TT-TG---TC-GCAT--CAAATTTA----TTT-GTTT----TAAAGAT-T---GC--ATAA-TCT----------A---GTCATGTATCTCTAT---TC-T-AACCA-AATATA----------CGAAT-TTTTTTTTTTATTATTATTTGACGATACATT---T-AG------------------AA-GA-TCAT---TATA--AAACG---CCTTTAACAACAACGCAGTTCAA--A--AT---TAT-TAATAATTTT---AGCTTGG-AATGCA-GATTCACTTGAAACT--TCT--GC-TGTTTT--GT-CTAAT-TC-TT-ACAATATGT-T-CGA--CCAAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACACGACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAA-CT--GGACCAAACGCTACG-TGAAT-CTTCATGTCA-ATAAAAGGAAAACAA-----TGT-GATAATAA-A-GTT-ACCGC-A-CCCG-ATG-TTTT--ACAAATTCGCA-TTT--TTGATACAA-GTAATTCGGCA-AT-TCA-ACTG----AC-TTACTTAAATTTTAAACTGAAT-G-CAAATGTGTTCAATGCA-tataatataat
gi|9 : actaaacatttttttttttttaattaagaaatcataagaatttttcggtcgtcaattcatagattttttgttaagccatgcagtttagagattatGTAGGTGC-GCGGGTTTA--GG-ACCTTCTC--GAAACCCCGTCCCTA-AAAATTT-GACATGGGG----TAT-CTTGACAATG-TATA---TACTACTGTTGTAAAA--TT-ATT-TTTCGATAAAACAG-CAGCCTTTTTTTAGTTATT-AC-TTGTAGAAA-CAT--AC-------ATTGTTTTAACAG----CA-G-CAGTACCATTGAGGACTGTGTTTCGCGAGTGTGTGGGTGGAGGATT-ATATAG-AAAATA--ACGTGTGTGTA-ACTGACTGTGT--T-TT--GTTGTATA-TTC----AGCTTAAAAGTG---GGA--GTGAATTTGGT--GCT--GT---G-TT-CTTTATGACT-ATT---------CATATT-----CAAAA---CG-AAA----ACA--AAACAAT-TTTGAAAAAT-A-TT-G-A--TCCGAAAAACAATGT-ATTGGG--AGTTCGAGCT-CGTTTTT---ATGAATAT-AAAGATG-T--CAAA-GTT-TT--GA-TAA-----AAAAAC-----------T-CTCGCTGAGCAGCAG-TTTTT-AAATG-ATCGTTATT-GAAT-ATT-CGC
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): AAGTTTCTTCATCATTTTCGCATTTTCGAATGTTAAAAAAATGTGCATGCATACAAAAGACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGGGCAGGGTGAATGTGACCGAAAACTCTTGTGACTAGCGAAGATGAAAAAGACGGAATAAACAAGTGATTCATACACATCCGAAAAATATTAAGATCAATTTTTAACATTATATTTTTGCCAGTATCGACTTTGAATCGGTTTGCTCATTTTTCAAAATCAAATGGCCTTTTTCCCCAATGAATTATTTGCACAGGTGCGCCATAATGCAATATACCGACAGTGGTGAAATCCGGGTGAACATTGTGTAATGTCACTATAACAATAGATTTTTGCCTAGTATGGTAAAGGAAGAACGAAAGAACGTGTTTGGCGATTTCTAATGCAAGTTTTAAAATATTATCAACGTAGAAAAGAAGATAAGTTTGTCTATCCCAAGATAAGAAATGATAAAACATGTATAAGGTAACGAAACTGTTTGTGTCATTGTATCATGCCTCTAGTGTCCGTTTCTGTAACCTTGTCTGTATTTATGGCAAATACAGATAATACTGTACCAATGCATATCATAGTGCATAATAAACATTGTGATTTTACAATTAAAGCATGTGACGAGTTTAGTTTTCTCGTTTATTATTAAATTTATTGTTTGTGATCAAAAATGAAAACCATACTGTGCATAATATATTAAAGTGTATTTTATCCGTCTCTCTTTGTCTGAAAATTTTAAAGAGTGTTCTGCTAATACGCGTCAAATTTCCTGAATAAAACCTTTAAAGTGCCCCACATGGTCTCCCCTTTCTAACTTTTCTCCGTAAAAGATTGCACCCAGCTTCATATTTTTCCCGAAAACTGTCGCTGTTATTACTTTATCATATAAATTCATCTGCCTTGCGTCGAAATGAAAGGATAGACTTTACGATAGTAAACGAAAACATTGATACTATCTAAAGCATGATTAAAGCAATTTGTTGTT
Unaligned ( gi|11 ): CCATTTGGTCCTGAAGAAATTTTAGAGTGTCCGCTACATACGCGTCAAACTTTCTGAATAAAACTTAAAAGTGCATGGATCTCCTGCCTAAATTTTCTGCTAAAGTTGTCAGCCTGTCTTCGCTTTCCCCCAAAATTGTCCGCTTTTAGACTTCATAAAATTAAAGGGACTGGAAACGCGTTATCTCAAAAGTTTTGCATCGGAAAACGAAAGGCGAAGACTTACAAACTTAAATGAAACCTGATATCACCTTCAATATGGTAAAAGCAGCTGTTGTTAATAGTTCATAATTGAGTATCATCGGTAATTTTAATTTTTACGCCTCCTTTCTATCAACGCAATTGACGTCACAATGAAATGTACACACGAACCAAAAGATTCGACGCGTTAGATTTTGCGTTACCCCAAAATCGCTGACGTAGGCAAACCCGCGACCTACGTTATAAATCATAAAGTCGCAA
Unaligned ( gi|15 ): TCTAAAGTGCTATGAGTCTCCTGGCCTAATTTTCTGTAAAGTTTGGGTGGACATGTCAGAATAAAAGGGATGAAACGTGAACTATCTCAAGTTTTGCATTGGAAACGAAAGGAAGACATTCGAAATGAAACGAAACCTTAATATACCTCAGTATGTTAAAGCAGCTGTAGTTAATACTCATAATTAATATCGGTAATTTTTTACGCTCTTTATCATCAGTCAATACTATCAACGCAATCGTTACGTCACCATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGAAATGCGTACCCCAAAACCGTGACGTAGGCAAACCCGCGACCTACGTTA
Unaligned ( gi|16 ): TTTGCATCGGAACTGAGTCCCAAGGAAGACTTAATCGAGAAATAAGAGCGAGAACCTTGATTATACCCTCTTTGGTGTAATGCTGGTTTTAGGAGGCCTAAACAGGCAGCCTATTTGTTAATATCTAAAGTGCATATCGGTAAAGTTTTTACGCTCTCTATCATCAGTCAATCTATCAAAGAATTGCTTACGTCACAATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGGATTTTGCGCCCGGTACCCACAAAACTGCCGCTGTTACGTAGCCGAAAAACGCTGCGACC
Unaligned ( gi|17 ): TAATGAAAAAGAAAAAAAGTACAGAAATATTTGTAAAACATTCTGGAAAATTCTTTCCATGGCCATGTAGTAATATGATATGTTTGTATTCAAAATATAGACATGTATATAAAGCTACTAAATTAGATCACAATCTTACCCGCTTCAATGGTATTGACTATGGGTTAATATTTCAGTTTCCCCGGAACCTTCTCACAGTAATAAGGCAAACGATTTAAGTATCAATTAATAATCTTATTATATTCTTTTTACATCACTTTCCACCCAT
Unaligned ( gi|20 ): CCTCTGTAAGAATTGATATTATAACAGGATGGAATGCTTACCTCGAATTTTGCATCGGAAACGGAAGAAAAGACTCTTAGAAAATTAAACGAAGCATGATATATTTCAATATGATGAGATAATTTAAATTTAAACGCTTATAAATCTATTCACTACGCTAATTGTTACATGACCTACTCACAATGAAATGTGCACGAAAAAAGACCAATCGTAA
Unaligned ( gi|21 ): CAAATATTTTCCCATCGGAATCGAAAGGAAGCAAAATTAAATGAAACATATTCATATCGGTAAAAAATTGAAATCTTTATTATCTATGCACAACATAAAGGCAATTGTTACGTCACAATTGAAAGTACACAGAAAAAGACGTCGAGTCGTAAGATTTGCGTACCCCAAAGCCGTGACGTAGGCAAACCCGCGACCTACGTTAAACTATAAAT
Unaligned ( gi|25 ): TATTGCGTTAACGTAATTTCAACCAAAAATGACATTTTGACAACTCATTTTACCACATCAGAAATGAATGAAAGGATAAATGATAGGGGCTGGGATCATGCTCCATGTCTCTAGTGCATGTGATCTGTACCCTTGTTTGTATATGAA
Unaligned ( gi|29 ): CGAACTAAATTTTTTTTTATTAAGAAATCATAAAAAAATTTCGTCCAATCATAATTGTTGTTAAGCCATCAGTTGAAAGATTATTAAATGATAGTGAAATAAAA
Alignments
lowQualScore : 1 1111 1 1 2222222 2222 333333333 222222222222 11 11 11111 1 1 1111 111 111 222222222 111111 1111 1 1111111 2222222222222 11 1111 111 1111 111 11111 111111 444444444444444444444444444444444 44444444444444 11 111 1111 11111 22222222222222 222222222 33333333333 1111 6666666666666666 22222222222222222 111111 11111 111 22222222 1 22 111 11111 111 1 1111 333 11 11111 1 333333 111 11111 2222 11 1 11 111 1 44444444444444 1 1 1 33333333 11 1111111 1111 1 22222 1 1 1 4444444444444444444 11 11 22 1 1 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 22 1 222 1 33 33333
lowQualScore : 4 4 4 4 55 2 4 5 0 5 5555 5 5 888 5 0 55 5 5 0 5 5 1 0 1 1 77 5 77 0000000 2222 5 5 777777777 5 999999999999 55 77 5 33 44444 5 5 5 77 1 77 4 2222 5 000 5 77 77 77 000 5 5 5 000000000 999999 888 5 0000 66 4 4 1 4 4 4 4 55 3 55 3 3 0 3 3 4 777 4 66 4 55 4 4 4 55 4 8888888 2222222222222 55 5 5 4 4 4 4 4 4 5 5 1 11 1 0 5 88 0000 66 555 5 0000 777 3 666 5 5 3 5 0 66 5 9 66 3 66 4 11111 4 777 555555 55 555555555555555555555555555555555 6666 4 4 4 4 4 777 4 11111111111111 11 5 55 000 4 999999 66 2 9999 4 3333 4 11111 66 5 66666666666666 111111111 5 5 33333333333 5 55 1111 1 3333333333333333 9999 55555555555555555 5555 888888 3 666 99999 444 8 22222222 8 6 0 99 99 6 22 6 3 6 6 6 111 6 6 99999 1 6 444 6 88 8 8 7777 444 1 11 8 88 8 88 0 22222 3 2 0 2 8 8 777777 8 8 6 6 6 6 6 6 6 99 555 6 66 7 6 6 88 8 77777 8 8 8 8 3333 2 11 0 22 777 0 8 9 6 1 22222222222222 2 0 1 3 0 0 2 2 0 88888888 8 0 3 33 8 0 4444444 9999 8 8 6 8 0 11111 0 8 8 88 8 8 8 1 8 0 0 0 4444444444444444444 3 33 66 33 00 7 7 3 3 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 00 3 555 0 3 6 7 6 7 7 11 55555
lowQualScore : . . . . .. . . . . . .... . . ... . . .. . . . . . . . . . .. . .. ....... .... . . ......... . ............ .. .. . .. ..... . . . .. . .. . .... . ... . .. .. .. ... . . . ......... ...... ... . .... .. . . . . . . . .. . .. . . . . . . ... . .. . .. . . . .. . ....... ............. .. . . . . . . . . . . . .. . . . .. .... .. ... . .... ... . ... . . . . . .. . . .. . .. . ..... . ... ...... .. ................................. .... . . . . . ... . .............. .. . .. ... . ...... .. . .... . .... . ..... .. . .............. ......... . . ........... . .. .... . ................ .... ................. .... ...... . ... ..... ... . ........ . . . .. .. . .. . . . . . ... . . ..... . . ... . .. . . .... ... . .. . .. . .. . ..... . . . . . . ...... . . . . . . . . . .. ... . .. . . . .. . ..... . . . . .... . .. . .. ... . . . . . .............. . . . . . . . . . ........ . . . .. . . ....... .... . . . . . ..... . . . .. . . . . . . . . ................... . .. .. .. .. . . . . ............................................................................. ......... .. . ... . . . . . . . .. .....
lowQualScore : 0 0 0 0 55 0 4 0 0 0 6666 0 0 888 0 4 44 0 0 1 0 0 2 1 4 4 99 7 99 7777777 1111 7 7 111111111 7 333333333333 77 44 7 66 33333 7 7 7 99 4 99 1 1111 7 000 7 99 99 99 000 0 0 0 000000000 444444 888 0 6666 99 0 0 3 0 0 0 0 55 9 55 6 6 5 6 6 0 000 0 44 0 55 0 0 0 55 0 5555555 7777777777777 00 1 0 4 4 4 4 4 4 0 0 4 44 4 1 7 77 6666 99 666 0 6666 555 6 222 0 0 4 0 1 99 0 8 11 2 11 4 11111 4 888 111111 55 555555555555555555555555555555555 1111 0 4 4 4 4 000 4 00000000000000 99 0 22 222 4 000000 11 6 4444 4 9999 7 33333 11 0 66666666666666 111111111 7 0 11111111111 7 11 8888 7 0000000000000000 8888 88888888888888888 8888 888888 2 666 00000 000 0 22222222 0 0 8 22 22 7 22 7 2 7 7 7 777 7 7 77777 0 7 000 0 88 0 0 0000 444 4 00 0 88 0 88 8 66666 2 5 0 5 0 0 666666 0 8 7 7 7 7 7 7 7 22 555 7 88 2 7 7 88 0 88888 0 0 0 0 8888 5 00 0 55 555 0 8 8 5 2 00000000000000 5 0 0 2 0 0 5 5 2 00000000 0 8 2 66 0 8 6666666 0000 0 0 0 0 8 88888 8 0 0 66 0 0 0 0 0 0 0 0 8888888888888888888 2 88 55 88 77 3 3 3 3 00000000000000000000000000000000000000000000000000000000000000000000000000000 777777777 00 3 000 7 3 7 3 7 3 3 77 77777
consensus : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATT---A-AAGATCCA---CCTCTTCC-AA-AA-TCAC---TA-A--AAACGCTTTTT--AACAACAACGCAGTTCAA--AT-AT---TAT-TAATA--TTT---AGCTTGG-AATGCA-GATTCACTTGAAACT--TCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TC---TCA-ACACATAAAAGCTATCTAAAGTAC-T-GTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTCG---TCGTCCAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAA-AAAGGC-GCATGAACCGCNA--TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GCC-T-C---TTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
Reference ( family-200 ) : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATT---A-AAGATCCA---CCTCTTCC-AA-AA-TCAC---TA-A--AAACGCTTTTT--AACAACAACGCAGTTCAA--AT-AT---TAT-TAATA--TTT---AGCTTGG-AATGCA-GATTCACTTGAAACT--TCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TC---TCA-ACACATAAAAGCTATCTAAAGTAC-T-GTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTC----TCGTCCAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAA-AAA-GC-GCATGAACCGCCA--TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GCC-T-C---TTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
gi|1 : ACGTAGGG-C-GCGGGTTTA-CGGGACCTTCTC--GAAA-CCCCTCC-CG-AAAATTTTGACA-GAGGAGATTATTCTTGACAATG-TATA---TACTACGGT-TTAAAAAATT-ATT-TTTCGATAA--CAG-CACCGTTTTT--AGTAAT--ACGTCGTA--AA-CATTTAC------CATTGCTTTAATAG----CACG-C---------GAT-ACTGTATGCCG------------TTGATTATT--TATAGGAAAATAT-ACG-----GTG-ACTGACT-T-T--T-TC--TTGGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATGTGGTTTGCT--GT---TCTT-CTTGATGA-TGATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-T---GAAAAT-A-TTTG-A--TGC-AAAA--AAT-T-ATGGGGTCAG-TC-AGCT-CGTTTTTTGAGTGAA-A--AAAGATGCT--CAAT-G-T-TT--GA-T-------AAAAAC-----------C-GTCACC-AGTAGCTGTTTTTTTAAATGGA-CGTAA-TTAAATTATT-CGCGAC-GTCAT-GAACGACGTGATTCATTTACTTTTCATTGCCGTTTCTTC----AAAACATCAC---AGAA-CA----GCGT-ATCA-CGCCCTGCAT---TAAAAGGAAGT--GAATACGCATAAAAAAAAAACCA-CAT-CAATTTAATTAATTATA--AGATATCAAGGAAA-ATGTT-GTTGAAATTTTCTGTCGAAAGTTGGTAGATTTTA-----C-T---CGCC--GC--TATACA--TGTT--A----------T-T-----------ATG-GATTCGCTAG-T-AAAC-AAT---AGATAA-TGGTAT-----T-ATGAAT-AATTAAA--TAAT-TTTTATAATCA-TTCTGTAA---CCAT--CA---TTA----TTT-GTTT----TAAAAAT-----AC--ATTG-TCT----------AA--GTCATGTATCTATAA---TT-CTAACCA-AAA-GA---------CAGAGG-TGTTTTTTT--CTATT--T-GACGATACATT---AGAAGATCCA---CCTCTCTC-AA----TT-T---TA-A--AAA----------AA-AACAATG---TTCAA--AT-ATAGAGAT-AAGTG--TGTGAGAGGTTGG-AATGCA-GATTCACTTGAAACT--TTT--GT-TGTTTT-TGT-CTAAT-TTCTC-ACAAT---T-T-CGA--C-CAAGTCCTAAT-TCTATTG---CGTTATAGTAG--CTTAG-A-GT----ACAG-ACATGTGTAGT--CCA-TCAACGGA-CATT-C--TGTTGGAAA-T--GGACCAAACGCTA----------TCCATGCCA-ATAAAAGAAAAAAAA-----TGT-GTTAATAA-A-GTTAACCGC-A-TCCG-ATGTTTTT--ACAAA-----G-GTTC-TTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----ACTTTACTTTAATTCTAACCTGAATGG-CAAATGCGTTCAACGCA-A----ATATTTCCAAACTTCCACGGATTCGTC---TCACACAAATTAATGCTATCTTAAGT---------------AGTGGGAG-GAAGATATTAGTTTTATTT-TACT-AATAATTTTCTCA---GCGT-CAAT-TTTC-AATCGCCACGTAGTGCACGTTGGTTC-TAGTTTTCAAAAAT-G-AAGCGTG----C-CTCTAGAA-AAAGGC-GC-TGAACCGCCC--ATTTTAA-GCGCA-TGAG-AAAGTGAAT-AAGCGATGCACGCC-GAAACAATAGTGCACTC-A-ACACCCCC-CCCC-CCCG---C---GCCAT-C---TTTTGAATTG----CTC--CATGGTA-CCATTTTTTTT-TTCAATTGCA--TTACTTCGTTAAAATTTGAGCTG-GTTCGAATT
gi|1 : taAAATTATGTAAGAAA--AAGAAAAGAAAGAAAAATTTGTGAATACACG--CACTG-TTCCTCTGT-TATGTGTCTGTATTC-AAATACATATAAAT-AAGC-----ATCACTTCATTatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaaattatgtaagaaaaagaaaagaaagaaaaatttgtgaatacacgcactgttcctctgttatgtgtctgtattcaaatacatataaataagcatcacttcattggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|10 : taacgtagggcgcgggtttacgggaccttctcgaaacccctcccgaaaattttgacagaggagattattcttgacaatgtatatactacggtttaaaaaattatttttcgataacagcaccgtttttagtaatacgtcgtaaacatttaccattgctttaatagcacgcgatactgtatgccgttgattatttataggaaaatatacggtgactgactttttcttggtataattcagcttaaaatggagagaatgtggtttgctgttcttcttgatgatgattcatatcaaaacgaaacaaaaacaattgaaaatatttgatgcaaaaaattatggggtcagtcagctcgttttttgagtgaaaaaagatgctcaatgtttgataaaaaccgtcaccagtagctgtttttttaaatggacgtaattaaattattcgcgacgtcatgaacgacgtgattcatttacttttcattgccgtttcttcaaaacatcacagaacagcgtatcacgccctgcattaaaaggaagtgaatacgcataaaaaaaaaaccacatcaatttaattaattataagatatcaaggaaaatgttgttgaaattttctgtcgaaagttggtagattttactcgccgctatacatgttattatggattcgctagtaaacaatagataatggtattatgaataattaaataatttttataatcattctgtaaccatcattatttgttttaaaaatacattgtctaagtcatgtatctataattctaaccaaaagacagaggtgtttttttctatttgacgatacattagaagatccacctctctcaattttaaaaaaaaacaatgttcaaatatagagataagtgtgtgagaggttggaatgcagattcacttgaaacttttgttgtttttgtctaatttctcacaatttcgaccaagtcctaattctattgcgttatagtagcttagagtacagacatgtgtagtccatcaacggacattctgttggaaatggaccaaacgctatccatgccaataaaagaaaaaaaatgtgttaataaagttaaccgcatccgatgtttttacaaaggttctttatacatgtaattcggcaattgaactgactttactttaattctaacctgaatggcaaatgcgttcaacgcaaatatttccaaacttccacggattcgtctcacacaaattaatgctatcttaagtagtgggaggaagatattagttttattttactaataattttctcagcgtcaattttcaatcgccacgtagtgcacgttggttctagttttcaaaaatgaagcgtgcctctagaaaaaggcgctgaaccgcccattttaagcgcatgagaaagtgaataagcgatgcacgccgaaacaatagtgcactcaacaccccccccccccgcgccatcttttgaattgctccatggtaccattttttttttcaattgcattacttcgttaaaatttgagctggttcgaattatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAACAAT-TT-GAAAAAT-A-TT-A-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------A-GTCAC--AGCAGC---------A--------GTTA-T-GAAT-ATT-CGCGAC-GTTATTGAACGACCTTATTCGTTTACTTTTCAT-G------------------CATCAC---AGAA-CG----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTAGAATATTCATAAAAAAAAC-CCA-CAT-CAA--TA--TATTTATA--AAATATCATGGAAA-ATGTTAGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--TA--CAT---G----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---GGATAATTATAATA----TAATAGT--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAAATTA----TTT-GTTT----TAAAGAT-T---GC--ATAG-TCT----------A---GTCATGTATCTATATATATT-CTAACCA-AAAAGACCAAAAAAGACGAGTACTTTATTTTTCCTA-T--TTGACGGTACATT---ggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|12 : GTAG-T-C-GCGG-TTT--CGG-AGCTTCTCATGATATACCCTCC-TATAAAATTTTGCCA-GGGG----TAT-CT-GACAATGATATA---T-CTACTGT-GTATAAA-TA-ATT-TTTCGATAAA-TAG-CACCG---TTTTAGTTATTAACGTTGTA--AC-AAT--AC------CATTGTTTT-ACAGTCA-CA-GACCTATG----GAG-ACTGATTT-CA------------TT-A--ATT-TTATAG-AAAATA--ACG-----GTACACTGACT-T-TTCT-TT--TTTGTTTGGTAT----AGCTT-AAA-TGGTCG-A--GA-AATTTGGT--GCTAGGTGTATCTT-CT--ATCA-T--TTAGCGTCAGGCATATGCGCGATAAGAGACCGTAAACGACCAG--AAACCATGCT-AAACAATCA-TT-G-GATTGCCAAAA--AAT-TAATGGGGA-TG-CCGAGCTCCGTTTTT---ATGAA-AT-AAGCATG-TTCCAGA-G-TGTT--GACT-------AAAAAC-----------CTGTCtaga
gi|13 : aaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGA----TAT-CTTGACAATA-TATA---TACTACTGT-GT-ACAT-TT-TTT-TTTCGATAAA-CAG-CACCG--TTTTTAGTAATT-ACGTTGTA--AA-CAT--AT------CATTGTATTAACAGTGCTCA-G-C---------AAG-ACTGCTTTCCA------------TTGG--ATT-ATATAG-AAAATA--ACG-----ATA-ATTAATT-T-T--TGTT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGCT--GCT--GT---TCTT-CTTGATGA-T-ATC---------TATAT------C-TAA---CA---------AA--AAACAAT-TT-G-AAAAT-ATTT-G-A--TGC-AAAA--AAT-T-AT-GGGT-AG-TCGAGCT-CGTTTTT---ATGAA-TA-AAAGATG-T--CAAA-G-T-TT--GA-TAAAAAAAAAAAACCAAAAAAAACAC-GTCAC--AGCAGCTGTTTTg
gi|14 : ta----AA--CATCAC---AAAAACA----ACGTTACCAACGCCCTGCAT---TGAAGGAAAATTCGAACATTCAT-AAAAAAAC-CCA-CTT-CAATTCA-TTATTTACA--AAATATCAAGGAAA-CTCTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----A-T---CGCCTATA--TA--TA--TGT---A----------TATAAATGGTAATAATG-A--TTGC-AG-T-AA-C-AAT---AGATAA-TAAAATA----T-A-AAAGTAATTAGAT-TAAT-TTT-GT-AT-A-TT-TG-AAT--CCAT--CGAAATTA-----TT-GTTA----TATA----T---AT--ACAG-TTTTTTTTTCTGAA---CTCATTTTTCTTTTT---TT-TT--------AAGG---------AGTATT-TTTCTTTTTTTC
gi|18 : aaaAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTGT-AAACG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCATCTACTTTTCAT-GCC-TTTCTTC----AA--CATTAC---AGAA-TA----TCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAA-CCT-CAT-CAAT----TTATTTAAAAGAAATGT----GAAT-ATGTTT-TTCAACTTTC--ATatccatcaattcccctctt
gi|19 : TG-A-CGTTA-T-AGAT-ATTGCGCGAC-GTCATTGAACGACGTTATTCATTTTCTTTTCAT-GCC-TTTCTTC----AA--CAACACCATAGAA-CA----GCGTTATTAACACCCTGCAT---TAAAAGGAAATTCAAATACTCATTAAAAA----CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATATTTGTAGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---GGCC--G---TA--TA--------------------AT-----------ATT-G--TCA-------AA-C-AAT---AGac
gi|2 : AACGCTTCATGTCA-ATAAAAGAAAAAAAAAAATGGGT-G-TAATAA-A-GTT-ACCGCGA-TCCG-ATG-TTTTTAACAAA--AGTG-TTTCTTT-ATACCT-GTAATACGGCA-AT--GA-ACTG-----C-TTACTTAAATTCTAACTTGTAT-GGCAATTGCGTTCAACGCA-AAT--AAATTTCCCAA-CTCCAC-GATTC-TC---TCA-ACACAT-AAAGCTAT-TGAAGTACAT-GTAATG-TAGAGT--GGG-AAAGATATTAG--TTA-TT-TA-TGAGTGATTCTCTCGAGTTCGTCCAAT-TTTCAAAATG-CACATATTGCACG-TGAGTC-TAGTTTTCAAAAATCAAAAGCGTGC---CTCTCTAGAATGAA-GCGGCATGAACCGGCACTTTTTTAAGGCGCACTGAGAAAAGTGAATGAAACG-TG-ACGCCAGTAACAAT-GTATACTCAA-ACGCCCCC-CCCC-TTC----C---TCT-T-C----TCTTAATTGATCTCTTCCCATGGT-TCCA--TTTTTTACTC-ATTTCATTTTACTTT-TTAAAAATGTAGTTGTTTTCGA
gi|2 : AAACTACTAAATTAAAATAATG-----AAGAAAGAAA--AAAGAAAAATTTGTAAA-ACACGCTCGCTG-AT-CTCTGTATAT-TGTCTGTATTAAAAATACAGATAGAATAAGCCCCATATCACTTCATTcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaactactaaattaaaataatgaagaaagaaaaaagaaaaatttgtaaaacacgctcgctgatctctgtatattgtctgtattaaaaatacagatagaataagccccatatcacttcattgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|22 : aacgcttcatgtcaataaaagaaaaaaaaaaatgggtgtaataaagttaccgcgatccgatgtttttaacaaaagtgtttctttatacctgtaatacggcaatgaactgcttacttaaattctaacttgtatggcaattgcgttcaacgcaaataaatttcccaactccacgattctctcaacacataaagctattgaagtacatgtaatgtagagtgggaaagatattagttatttatgagtgattctctcgagttcgtccaattttcaaaatgcacatattgcacgtgagtctagttttcaaaaatcaaaagcgtgcctctctagaatgaagcggcatgaaccggcacttttttaaggcgcactgagaaaagtgaatgaaacgtgacgccagtaacaatgtatactcaaacgcccccccccttcctcttctcttaattgatctcttcccatggttccattttttactcatttcattttactttttaaaaatgtagttgttttcgacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGCAAGTTC--GTCCAAAGT--GTAGACGT-AAGTAAC-TGAACGA---GCA-TA--CA--T-----A----------TAT-----------ATG-T--TAGC-GGCT-AT-CGAATTTCAGAGAT-CCTAGTA------GTAAG-----TAGA--TCAT-TTT-ATAAT-GTTT-TG-AATCGCCATTCCAAGATGAAAAGTGT-G-TT----TAAAGTT-G---ACGAATAGTTCT----------A---GGTAGGTATgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|23 : TTTTCAAAA-T-GAA-GCGTGC---C--TCTAGAA-AAA-GC-ACATGAACCGCAA--TTTT-AA-GCGCACTGAG-AAAATGAAG-AAACA-TGCATGCC-GAAACAAT-GCTCACTC-A-ATACCCCCACCCCACCCCCTGC---GCC-TCC---TTTTTAATTGATCTCTT--CATGGTATCCA--
gi|24 : ttt-CTTGATGA-T-ATT---------TATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCAAAAA--AAT-T-ATAGGGT-AG-TCGAGCT-CGTT--------------------TG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCATCTGTTTTCT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTC
gi|26 : TCCAAT-TTTCAAATCGCCACGTATTGCACG-GTGTCC-TAGTTTTCA-------------------C-CTCTAGAA-AAAGGT-GCATGAACCG-AA--TTTTTAA-GCGCACTAAG-AAAGTGAAT-AAACC-TGCACGCC-GAAACAAT-GTTCACTC-
gi|27 : CGTAGGT-C-GCGGGTATA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----CAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCG-TTTTTTAGT
gi|28 : --TA--CA--TTTGCGA----------TA------------ATG-A--TCGC-AG-T-AA-C-AAT---AGACAA-TATAATA----T----AA--TAGTAAA--TAAT-TAT-TTCGT-T-CT-TG-AATC-CCAT--CAAGGTTA----CAT-GTAT----TAGTCATGT---AC--ATA
gi|3 : cgtgtaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCCC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTTGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ATG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTCGATCAGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AC-AAAGATG-T--TAAT-G-T-TT--GA-T-------AAAAAC-----------T-GTCAC--AGCAGCAGTTTTTT-AAATG-A-CGTTA-A-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCATTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-TA----GCGTTATTAACGCCCTGCAT---TAAAATGAAATTCGAATACTCATTAAAAACCC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCAC-AG-T-AA-C-AAT---AGATAA-TATGATACTTGT-ATAAAGGAATTAAAAATAAT-TT--ATAAT-A-TT-TG-AATC-CCAT--CAAAAT-A----TAT-GTTT----TAAAGAT-T---AC--ATAG-TCC----------A---GTCATGTATCTATAT---TCATTAACCA-AAA-GA---------ACGAGT-TTTTT------CTATT--TTGACG---CAT-----------------CCTCTTCC-AA-AA-TCA-------A--AAACG-TTTTT--AACAACAACGCAGTTCAA--AA-AT---TAT-TAATA--TTT---AGCTTGG-AATGCA-GATTCACTTGAAACT--TCT--GC-TGTTTT--GT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAATACTTGTTG---CGTTATAG-AG-TCTTAA-A-GT----ACA---CATGAGCAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACTCGGAACCAAACGCTACG-TGAAC-TTCCATGTCA-ATAAAAAAAAAAAAA----CTGT-GTTAATAA-A-GTT-ATCGC-A-TCCG-ATG-TTTT--ACAAATTCGTA-TTTTTTTTATACAT-GTAATTCAGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-TAAATGCGTTCAACGCA-ATCTTATATTT--AAA-ATCCAC-GATTC-TT---TCA-ACACATAAAAACTATCTAAAGTAC-TTGTAATGAT-GAGTGGGGG-AAAGAAATTAGTTTTA-TT-TGCTGAGTTATTCTC--------GTCCAAT-GTTCAAATTGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTACGTTC-CTCTAGAA-AAA-GC-GCATGAAACAC-A--TTTTTAA-GCGCACTGAG-AAAAGGAAG-AAACG-TGCATACC-GAAACAAT-GTTCACTC-ATATACCCCC-CCCC-TCC----CTTGGCC-T-TCTTTTTTTAATTGATCTCTT--AATGGTATCCA--TTTTC--CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTATAATTATG-----AA--AAGAAA-GAAAGAAATATTTGTACA-ACAC---CACTGTTTCCTCAGTATTTGTGTCTGTATTCAAAATACATAT-AA--AAGC----TATCACTTCATTtacatgt
gi|30 : AAAAA-A-GTT-GCCAA-A-TCCG-ATG-TTTT--ACAAATTTGTATTTTTTTTTATACAT-GTAATTCGGCA-A
gi|31 : T--GTAGATTT-A-----C-T---CGCC--GCTATA--CA--TGT---AAAATATACCGTAT-----------ATG-A--TCGC-A
gi|32 : --TTT--GC-TGTTTT--GT-CTAAT-TT-TC-ATAAT---T-T-CGAT-CA-AGTTCCTAAT-
gi|33 : ACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-
gi|34 : TAGGT-C-GCGGGTTTA-CAG-ACCTTCTC--GAAAA-CCCTCC-T
gi|35 : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--
gi|5 : tttaCGTAGGT-CCGCGGGTTTAACGG-ACTTTC-----GAAACCCCTC--TG-AAATATT-GACA-GAGGG---TA--CTTGACAATG-TATAATATACTACTGT-GTTAAAA-TTTATTATTTCGA--AA-CAGGCACCGCTTTTTTAGTAATTCACGTCATA--AAACAT--AC-------ATTGTTTTAAC-G----CA-G-C---------GAG-ACTGTTTCC--------------TTGA--ATTTATAT-G-TAAATAGTAAG-----GTG-ACTGACT-T-T--TACT--GTTG-ATA-TTC----AGCTTAAAA-TG---G-ACAGAGAATTGGTT--GCT--GT---TCTTACTTGATGA-T-ATG---------CATAT------AAAAA---CA-AAA----CAACAAAACAAT-TT-GGAAACT-A-TT-GCA--TGC-AAAA--AAT-T-ATGGGGT--G-TCGAGCT--GTTTTT---ATGAA-ATTAAAGATG-T--CAAAAG-T-TTTGGA-T-------AAAAAC-----------C-GTCCT--AGCAGCTGTTTTTT-CAATG-G-AGTTA-T-AAA--ATT-CTCGACCGTCACTGA-CGA---TATTCAT--ACTCT-----GC--TTTCTTC----AA--AAACAC---ACAC-CATGAAG-GTTATTAACGCCCTG--T---TAAAAGGAAATCTTGATACTCATTAAAAAA-C-CCA-CATTCAATATA-TCATT---A--AAATATCAAGGAAATATATT-GT-GAAATTTC--GTCGA---T--GT-GATT--A-----C-T---CGCC--GC--TA--TACTTGT---A----------CAT-----------TTGTA--TAGT-AG-TTCG-C-AGT---A-AT---TATAATA----G-ATGAA----TTAAA--TAATGTTT-ATAAT-T-TC-TG----T-CCAT--CAAATTTA----TTT-GTTTA---TAAAATT-T---AC--AAAG-TCT----------A---GTCATG-GTCTA-AT---TT---AACCA-AAAAGA---------GAGAGT-TGGTTTTTTTTCTATT--T-GACGATACATTTA-G-AAGATCCA---CCTCT-CC-AATAA-TTACCGGTA-ATAAAACTCTTTTTTTAA-AACAA-GCAGATCAA--ATTAT---TAA-TAATA--TTT---AGCTTGG-AATGCAAGATTCACT-GAAACTATTAT--GCATGTTTT-TGTGCTA-T-TT-TT-ACAAT---TAT-CGA--C-CATTTCCTAAT-CCTGGTG---CGTTATAGCAGCTCTTAG-A-GTAAGGACA----ATGGGTAGT--CCATTCCACGG--CATT-CA-TGTTGG-AACT--AGACCA
gi|6 : TC-ATAAT-T-TT-T---ATC-CC--------CTTA----TTTTATTTCGGATATATAT-TTAAAC--TTAT-TCT----------ATCTGACATGTATATATG---------AATCATAAGATAG--------AGGAGT-ATTTTTTCTTTCTATT--TAGACGATATATTTAAA-AAGA--CAAACCCTCTTCCCAA-AACTCAC---TA-A--AA-CGCTTTTT--ATAAAAAACGC---TTAATCAC-AT---CATGTAATC---------GCTTGGCAATGCACGAATCACTTGATAAT--TCTTCGC-TGTTTTGTCT-CTACTGTT-TCTACAAT---T-TTCGAGCCACGTTTCCTAAT-CCTGCTGGTTCATTATAG-AG-TCTTAGCACGT----ACA--CGAAGAGTAGTAGCCA-TCCACGGAACATTTCACTATTGTAA-CT--G-ACCAAACGCTACGGTTAAC-CTTCTTGTCATATAAACGAAAAGGAA----G-GTCGGTAAGAATATGTT-ACTGA-AATCCGTATG-TTT---ACAAAT-CGTG-TTTCTT--ATACTTTGTAATTCGGCACATCTGACACTGCATGAC-TTACCTAAATTCTTAACTGAAT-G-CAAATGAGTTCAACTCATAAC--ATATTTCCAAA-ATCCAC-GATT--TCTAGTCA-ACA-ATAAAAGCCATTTAAAGTAA-T-AAAACA-T-GACTGGGGATAAAGAAATTAGTTTTA-TTGTACTGGGTGATTCTCTT----TTGTCCAATGTTTCAAATCGTCACGTATTGCACG--GGTCCTTAGTTTT
gi|7 : TAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-----------------A-CAG-CACCGTTTTTT-AGTAATT-ACGTTGTA--AA-CAT--ACATGTACCATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TTTTGTTGTATA-TTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-ACA----CAA--A----------------T-A-TT-G-A--TGCAAAAA--AGT-T----GGGT-AG-TCGAGTT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA---T-TT--GA-T-------AAAAAC-----------CGGTCACA-AACAGCATTTTTTT-TAATG-A-CGTTA-T-GAAT-ATT-CGCGAC-GTTAT------------TTCGTTTAC-TTTCAT-GCT-TTTTCTCAAAAAA--CATCACAA-AGAA-CA----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTCGAATATTC-CTAAAAAAAtca
gi|7 : AAAAAAAC-AAAACAT-CAATTTA-TTATTGATA--AAACATCAAGGAAA-ATGTTAGTTGAAATTTC--GCCGC---T--ATACATGT-A-----CAT---TATC-------A--CA--------------------GT-----------ATG-A--TCGC-AT-T-AA-C-AAT---GGATAA-Taaaaaaaaaaaaacaacaaacaacaacaaaaaaacaaaacatcaatttattattgataaaacatcaaggaaaatgttagttgaaatttcgccgctatacatgtacattatcacagtatgatcgcattaacaatggataattataatataat
gi|8 : taggtcgcgggtttacggaccttctcgaaaacccctcctaaaaattttacagaggtatcttgacaatgtatatactactgtgtaaaaaacagcaccgttttttagtaattacgttgtaaacatacatgtaccattgttttaacagcagcgagactgttttccgttgaattatatagaaaataacggtaactgacttttttttgttgtatattcagcttaaaatggagagaatttggtgctgttcttcttgatgatattcatatcaaaacgacacaaatattgatgcaaaaaagttgggtagtcgagttcgtttttatgaaataaagatgtcaaatttgataaaaaccggtcacaaacagcattttttttaatgacgttatgaatattcgcgacgttatttcgtttactttcatgctttttctcaaaaaacatcacaaagaacagcgttattaacgccgtgcattaataaaaggaaattcgaatattcctaaaaaaaaaaaaaaaaaaaacaacaaacaacaacT---AAATGA-TATAATA------GTAAA-----TAAA--TACT-TTG-GTAAT-A-TT-TG---TC-GCAT--CAAATTTA----TTT-GTTT----TAAAGAT-T---GC--ATAA-TCT----------A---GTCATGTATCTCTAT---TC-T-AACCA-AATATA----------CGAAT-TTTTTTTTTTATTATTATTTGACGATACATT---T-AG------------------AA-GA-TCAT---TATA--AAACGCCTTT---AACAACAACGCAGTTCAA--A--AT---TAT-TAATAATTTT---AGCTTGG-AATGCA-GATTCACTTGAAACT--TCT--GC-TGTTTT--GT-CTAAT-TC-TT-ACAATATGT-T-CGA--CCAAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACACGACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAA-CT--GGACCAAACGCTACG-TGAAT-CTTCATGTCA-ATAAAAGGAAAACAA-----TGT-GATAATAA-A-GTT-ACCGC-A-CCCG-ATG-TTTT--ACAAATTCGCA-TTT--TTGATACAA-GTAATTCGGCA-AT-TCA-ACTG----AC-TTACTTAAATTTTAAACTGAAT-G-CAAATGTGTTCAATGCA-tataatataat
gi|9 : actaaacatttttttttttttaattaagaaatcataagaatttttcggtcgtcaattcatagattttttgttaagccatgcagtttagagattatGTAGGTGC-GCGGGTTTA--GG-ACCTTCTC--GAAACCCCGTCCCTA-AAAATTT-GACATGGGG----TAT-CTTGACAATG-TATA---TACTACTGTTGTAAAA--TT-ATT-TTTCGATAAAACAG-CAGCCTTTTTTTAGTTATT-AC-TTGTAGAAA-CAT--AC-------ATTGTTTTAACAG----CA-G-CAGTACCATTGAGGACTGTGTTTCGCGAGTGTGTGGGTGGAGGATT-ATATAG-AAAATA--ACGTGTGTGTA-ACTGACTGTGT--T-TT--GTTGTATA-TTC----AGCTTAAAAGTG---GGA--GTGAATTTGGT--GCT--GT---G-TT-CTTTATGACT-ATT---------CATATT-----CAAAA---CG-AAA----ACA--AAACAAT-TTTGAAAAAT-A-TT-G-A--TCCGAAAAACAATGT-ATTGGG--AGTTCGAGCT-CGTTTTT---ATGAATAT-AAAGATG-T--CAAA-GTT-TT--GA-TAA-----AAAAAC-----------T-CTCGCTGAGCAGCAG-TTTTT-AAATG-ATCGTTATT-GAAT-ATT-CGC
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): AAGTTTCTTCATCATTTTCGCATTTTCGAATGTTAAAAAAATGTGCATGCATACAAAAGACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGGGCAGGGTGAATGTGACCGAAAACTCTTGTGACTAGCGAAGATGAAAAAGACGGAATAAACAAGTGATTCATACACATCCGAAAAATATTAAGATCAATTTTTAACATTATATTTTTGCCAGTATCGACTTTGAATCGGTTTGCTCATTTTTCAAAATCAAATGGCCTTTTTCCCCAATGAATTATTTGCACAGGTGCGCCATAATGCAATATACCGACAGTGGTGAAATCCGGGTGAACATTGTGTAATGTCACTATAACAATAGATTTTTGCCTAGTATGGTAAAGGAAGAACGAAAGAACGTGTTTGGCGATTTCTAATGCAAGTTTTAAAATATTATCAACGTAGAAAAGAAGATAAGTTTGTCTATCCCAAGATAAGAAATGATAAAACATGTATAAGGTAACGAAACTGTTTGTGTCATTGTATCATGCCTCTAGTGTCCGTTTCTGTAACCTTGTCTGTATTTATGGCAAATACAGATAATACTGTACCAATGCATATCATAGTGCATAATAAACATTGTGATTTTACAATTAAAGCATGTGACGAGTTTAGTTTTCTCGTTTATTATTAAATTTATTGTTTGTGATCAAAAATGAAAACCATACTGTGCATAATATATTAAAGTGTATTTTATCCGTCTCTCTTTGTCTGAAAATTTTAAAGAGTGTTCTGCTAATACGCGTCAAATTTCCTGAATAAAACCTTTAAAGTGCCCCACATGGTCTCCCCTTTCTAACTTTTCTCCGTAAAAGATTGCACCCAGCTTCATATTTTTCCCGAAAACTGTCGCTGTTATTACTTTATCATATAAATTCATCTGCCTTGCGTCGAAATGAAAGGATAGACTTTACGATAGTAAACGAAAACATTGATACTATCTAAAGCATGATTAAAGCAATTTGTTGTT
Unaligned ( gi|11 ): CCATTTGGTCCTGAAGAAATTTTAGAGTGTCCGCTACATACGCGTCAAACTTTCTGAATAAAACTTAAAAGTGCATGGATCTCCTGCCTAAATTTTCTGCTAAAGTTGTCAGCCTGTCTTCGCTTTCCCCCAAAATTGTCCGCTTTTAGACTTCATAAAATTAAAGGGACTGGAAACGCGTTATCTCAAAAGTTTTGCATCGGAAAACGAAAGGCGAAGACTTACAAACTTAAATGAAACCTGATATCACCTTCAATATGGTAAAAGCAGCTGTTGTTAATAGTTCATAATTGAGTATCATCGGTAATTTTAATTTTTACGCCTCCTTTCTATCAACGCAATTGACGTCACAATGAAATGTACACACGAACCAAAAGATTCGACGCGTTAGATTTTGCGTTACCCCAAAATCGCTGACGTAGGCAAACCCGCGACCTACGTTATAAATCATAAAGTCGCAA
Unaligned ( gi|15 ): TCTAAAGTGCTATGAGTCTCCTGGCCTAATTTTCTGTAAAGTTTGGGTGGACATGTCAGAATAAAAGGGATGAAACGTGAACTATCTCAAGTTTTGCATTGGAAACGAAAGGAAGACATTCGAAATGAAACGAAACCTTAATATACCTCAGTATGTTAAAGCAGCTGTAGTTAATACTCATAATTAATATCGGTAATTTTTTACGCTCTTTATCATCAGTCAATACTATCAACGCAATCGTTACGTCACCATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGAAATGCGTACCCCAAAACCGTGACGTAGGCAAACCCGCGACCTACGTTA
Unaligned ( gi|16 ): TTTGCATCGGAACTGAGTCCCAAGGAAGACTTAATCGAGAAATAAGAGCGAGAACCTTGATTATACCCTCTTTGGTGTAATGCTGGTTTTAGGAGGCCTAAACAGGCAGCCTATTTGTTAATATCTAAAGTGCATATCGGTAAAGTTTTTACGCTCTCTATCATCAGTCAATCTATCAAAGAATTGCTTACGTCACAATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGGATTTTGCGCCCGGTACCCACAAAACTGCCGCTGTTACGTAGCCGAAAAACGCTGCGACC
Unaligned ( gi|17 ): TAATGAAAAAGAAAAAAAGTACAGAAATATTTGTAAAACATTCTGGAAAATTCTTTCCATGGCCATGTAGTAATATGATATGTTTGTATTCAAAATATAGACATGTATATAAAGCTACTAAATTAGATCACAATCTTACCCGCTTCAATGGTATTGACTATGGGTTAATATTTCAGTTTCCCCGGAACCTTCTCACAGTAATAAGGCAAACGATTTAAGTATCAATTAATAATCTTATTATATTCTTTTTACATCACTTTCCACCCAT
Unaligned ( gi|20 ): CCTCTGTAAGAATTGATATTATAACAGGATGGAATGCTTACCTCGAATTTTGCATCGGAAACGGAAGAAAAGACTCTTAGAAAATTAAACGAAGCATGATATATTTCAATATGATGAGATAATTTAAATTTAAACGCTTATAAATCTATTCACTACGCTAATTGTTACATGACCTACTCACAATGAAATGTGCACGAAAAAAGACCAATCGTAA
Unaligned ( gi|21 ): CAAATATTTTCCCATCGGAATCGAAAGGAAGCAAAATTAAATGAAACATATTCATATCGGTAAAAAATTGAAATCTTTATTATCTATGCACAACATAAAGGCAATTGTTACGTCACAATTGAAAGTACACAGAAAAAGACGTCGAGTCGTAAGATTTGCGTACCCCAAAGCCGTGACGTAGGCAAACCCGCGACCTACGTTAAACTATAAAT
Unaligned ( gi|25 ): TATTGCGTTAACGTAATTTCAACCAAAAATGACATTTTGACAACTCATTTTACCACATCAGAAATGAATGAAAGGATAAATGATAGGGGCTGGGATCATGCTCCATGTCTCTAGTGCATGTGATCTGTACCCTTGTTTGTATATGAA
Unaligned ( gi|29 ): CGAACTAAATTTTTTTTTATTAAGAAATCATAAAAAAATTTCGTCCAATCATAATTGTTGTTAAGCCATCAGTTGAAAGATTATTAAATGATAGTGAAATAAAA
Alignments
lowQualScore : 1 1111 1 1 2222222 2222 333333333 222222222222 11 11 11111 1 1 1111 111 111 222222222 111111 1111 1 1111111 2222222222222 11 1111 111 1111 111 11111 111111 444444444444444444444444444444444 44444444444444 11 111 1111 11111 22222222222222 222222222 33333333333 666666666666666666666666666666666666666666 111111 1 11111 111 22222222 11 22 111 11111 111 1 1111 333 11 11111 1 333333 111 11111 2222 11 1 11 111 1 44444444444444 1 1 1 33333333 11 1111111 1111 111 22222 1 1 1 4444444444444444444 11 11 22 1 1 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 22 1 222 1 33 33333
lowQualScore : 4 4 4 4 55 2 4 5 0 5 5555 5 5 888 5 0 55 5 5 0 5 5 1 0 1 1 77 5 77 0000000 2222 5 5 777777777 5 999999999999 55 77 5 33 44444 5 5 5 77 1 77 4 2222 5 000 5 77 77 77 000 5 5 5 000000000 999999 888 5 0000 66 4 4 1 4 4 4 4 55 3 55 3 3 0 3 3 4 777 4 66 4 55 4 4 4 55 4 8888888 2222222222222 55 5 5 4 4 4 4 4 4 5 5 1 11 1 0 5 88 0000 66 555 5 0000 777 3 666 5 5 3 5 0 66 5 9 66 3 66 4 11111 4 777 555555 55 555555555555555555555555555555555 6666 4 4 4 4 4 777 4 11111111111111 11 5 55 000 4 999999 66 2 9999 4 3333 4 11111 66 5 66666666666666 111111111 5 5 33333333333 5 55 7 99 3 1 666666666666666666666666666666666666666666 666666 5 5 3 666 99999 444 8 22222222 8 8 8 0 11 99 6 22 6 6 6 6 111 6 6 99999 1 6 444 6 88 8 8 7777 444 1 11 8 88 8 88 0 22222 3 2 0 2 8 8 777777 8 8 6 6 6 6 6 6 6 99 555 6 66 7 6 6 88 8 77777 8 8 8 8 3333 2 11 0 22 777 0 8 9 6 1 22222222222222 2 0 1 3 0 0 2 2 0 77777777 8 0 3 33 8 0 4444444 9999 8 111 0 00000 0 8 8 88 8 8 8 1 8 0 0 0 4444444444444444444 3 33 66 33 00 7 7 3 3 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 00 3 555 0 3 6 7 6 7 7 11 55555
lowQualScore : . . . . .. . . . . . .... . . ... . . .. . . . . . . . . . .. . .. ....... .... . . ......... . ............ .. .. . .. ..... . . . .. . .. . .... . ... . .. .. .. ... . . . ......... ...... ... . .... .. . . . . . . . .. . .. . . . . . . ... . .. . .. . . . .. . ....... ............. .. . . . . . . . . . . . .. . . . .. .... .. ... . .... ... . ... . . . . . .. . . .. . .. . ..... . ... ...... .. ................................. .... . . . . . ... . .............. .. . .. ... . ...... .. . .... . .... . ..... .. . .............. ......... . . ........... . .. . .. . . .......................................... ...... . . . ... ..... ... . ........ . . . . .. .. . .. . . . . ... . . ..... . . ... . .. . . .... ... . .. . .. . .. . ..... . . . . . . ...... . . . . . . . . . .. ... . .. . . . .. . ..... . . . . .... . .. . .. ... . . . . . .............. . . . . . . . . . ........ . . . .. . . ....... .... . ... . ..... . . . .. . . . . . . . . ................... . .. .. .. .. . . . . ............................................................................. ......... .. . ... . . . . . . . .. .....
lowQualScore : 0 0 0 0 55 0 4 0 0 0 6666 0 0 888 0 4 44 0 0 1 0 0 2 1 4 4 99 7 99 7777777 1111 7 7 111111111 7 333333333333 77 44 7 66 33333 7 7 7 99 4 99 1 1111 7 000 7 99 99 99 000 0 0 0 000000000 444444 888 0 6666 99 0 0 3 0 0 0 0 55 9 55 6 6 5 6 6 0 000 0 44 0 55 0 0 0 55 0 5555555 7777777777777 00 1 0 4 4 4 4 4 4 0 0 4 44 4 1 7 77 6666 99 666 0 6666 555 6 222 0 0 4 0 1 99 0 8 11 2 11 4 11111 4 888 111111 55 555555555555555555555555555555555 1111 0 4 4 4 4 000 4 00000000000000 99 0 22 222 4 000000 11 6 4444 4 9999 7 33333 11 0 66666666666666 111111111 7 0 11111111111 7 11 3 22 5 7 222222222222222222222222222222222222222222 888888 6 0 2 666 00000 000 0 22222222 0 0 0 8 00 22 7 22 7 7 7 7 777 7 7 77777 0 7 000 0 88 0 0 0000 444 4 00 0 88 0 88 8 66666 2 5 0 5 0 0 666666 0 8 7 7 7 7 7 7 7 22 555 7 88 2 7 7 88 0 88888 0 0 0 0 8888 5 00 0 55 555 0 8 8 5 2 00000000000000 5 0 0 2 0 0 5 5 2 00000000 0 8 2 66 0 8 6666666 0000 0 222 8 66666 8 0 0 66 0 0 0 0 0 0 0 0 8888888888888888888 2 88 55 88 77 3 3 3 3 00000000000000000000000000000000000000000000000000000000000000000000000000000 777777777 00 3 000 7 3 7 3 7 3 3 77 77777
consensus : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATT---A-AAGATCCA---CCTCTTCC-AA-AA-TCAC---TA--AAAACGC--TTTTTAACAACAACGCAGTTCAA--A-TAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TCT---CA-ACACATAAAAGCTATCTAAAGTAC-T-GTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTCG---TCGTCCAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAAAAAGGC-GCATGAACCGCNA--TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GCC-T-C---TTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
Reference ( family-200 ) : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATT---A-AAGATCCA---CCTCTTCC-AA-AA-TCAC---TA--AAAACGC--TTTTTAACAACAACGCAGTTCAA--A-TAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TCT---CA-ACACATAAAAGCTATCTAAAGTAC-T-GTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTCG---TCGTCCAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAAAAAGGC-GCATGAACCGCNA--TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GCC-T-C---TTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
gi|1 : ACGTAGGG-C-GCGGGTTTA-CGGGACCTTCTC--GAAA-CCCCTCC-CG-AAAATTTTGACA-GAGGAGATTATTCTTGACAATG-TATA---TACTACGGT-TTAAAAAATT-ATT-TTTCGATAA--CAG-CACCGTTTTT--AGTAAT--ACGTCGTA--AA-CATTTAC------CATTGCTTTAATAG----CACG-C---------GAT-ACTGTATGCCG------------TTGATTATT--TATAGGAAAATAT-ACG-----GTG-ACTGACT-T-T--T-TC--TTGGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATGTGGTTTGCT--GT---TCTT-CTTGATGA-TGATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-T---GAAAAT-A-TTTG-A--TGC-AAAA--AAT-T-ATGGGGTCAG-TC-AGCT-CGTTTTTTGAGTGAA-A--AAAGATGCT--CAAT-G-T-TT--GA-T-------AAAAAC-----------C-GTCACC-AGTAGCTGTTTTTTTAAATGGA-CGTAA-TTAAATTATT-CGCGAC-GTCAT-GAACGACGTGATTCATTTACTTTTCATTGCCGTTTCTTC----AAAACATCAC---AGAA-CA----GCGT-ATCA-CGCCCTGCAT---TAAAAGGAAGT--GAATACGCATAAAAAAAAAACCA-CAT-CAATTTAATTAATTATA--AGATATCAAGGAAA-ATGTT-GTTGAAATTTTCTGTCGAAAGTTGGTAGATTTTA-----C-T---CGCC--GC--TATACA--TGTT--A----------T-T-----------ATG-GATTCGCTAG-T-AAAC-AAT---AGATAA-TGGTAT-----T-ATGAAT-AATTAAA--TAAT-TTTTATAATCA-TTCTGTAA---CCAT--CA---TTA----TTT-GTTT----TAAAAAT-----AC--ATTG-TCT----------AA--GTCATGTATCTATAA---TT-CTAACCA-AAA-GA---------CAGAGG-TGTTTTTTT--CTATT--T-GACGATACATT---AGAAGATCCA---CCTCTCTC-AA----TT-T---TA--AAAA----------AA-AACAATG---TTCAA--A-TATAGAGAT-AAGTG--TGTGAGAGGTTGG-AATGC-A-GATTCACTTGAAAC--TTTT--GT-TGTTTT-TGT-CTAAT-TTCTC-ACAAT---T-T-CGA--C-CAAGTCCTAAT-TCTATTG---CGTTATAGTAG--CTTAG-A-GT----ACAG-ACATGTGTAGT--CCA-TCAACGGA-CATT-C--TGTTGGAAA-T--GGACCAAACGCTA----------TCCATGCCA-ATAAAAGAAAAAAAA-----TGT-GTTAATAA-A-GTTAACCGC-A-TCCG-ATGTTTTT--ACAAA-----G-GTTC-TTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----ACTTTACTTTAATTCTAACCTGAATGG-CAAATGCGTTCAACGCA-A----ATATTTCCAAACTTCCACGGATTCGTCT---CACACAAATTAATGCTATCTTAAGT---------------AGTGGGAG-GAAGATATTAGTTTTATTT-TACT-AATAATTTTCTCA---GCGT-CAAT-TTTC-AATCGCCACGTAGTGCACGTTGGTTC-TAGTTTTCAAAAAT-G-AAGCGTG----C-CTCTAGAAAAAGGC-GC-TGAACCGCCC--ATTTTAA-GCGCA-TGAG-AAAGTGAAT-AAGCGATGCACGCC-GAAACAATAGTGCACTC-A-ACACCCCC-CCCC-CCCG---C---GCCAT-C---TTTTGAATTG----CTC--CATGGTA-CCATTTTTTTT-TTCAATTGCA--TTACTTCGTTAAAATTTGAGCTG-GTTCGAATT
gi|1 : taAAATTATGTAAGAAA--AAGAAAAGAAAGAAAAATTTGTGAATACACG--CACTG-TTCCTCTGT-TATGTGTCTGTATTC-AAATACATATAAAT-AAGC-----ATCACTTCATTatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaaattatgtaagaaaaagaaaagaaagaaaaatttgtgaatacacgcactgttcctctgttatgtgtctgtattcaaatacatataaataagcatcacttcattggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|10 : taacgtagggcgcgggtttacgggaccttctcgaaacccctcccgaaaattttgacagaggagattattcttgacaatgtatatactacggtttaaaaaattatttttcgataacagcaccgtttttagtaatacgtcgtaaacatttaccattgctttaatagcacgcgatactgtatgccgttgattatttataggaaaatatacggtgactgactttttcttggtataattcagcttaaaatggagagaatgtggtttgctgttcttcttgatgatgattcatatcaaaacgaaacaaaaacaattgaaaatatttgatgcaaaaaattatggggtcagtcagctcgttttttgagtgaaaaaagatgctcaatgtttgataaaaaccgtcaccagtagctgtttttttaaatggacgtaattaaattattcgcgacgtcatgaacgacgtgattcatttacttttcattgccgtttcttcaaaacatcacagaacagcgtatcacgccctgcattaaaaggaagtgaatacgcataaaaaaaaaaccacatcaatttaattaattataagatatcaaggaaaatgttgttgaaattttctgtcgaaagttggtagattttactcgccgctatacatgttattatggattcgctagtaaacaatagataatggtattatgaataattaaataatttttataatcattctgtaaccatcattatttgttttaaaaatacattgtctaagtcatgtatctataattctaaccaaaagacagaggtgtttttttctatttgacgatacattagaagatccacctctctcaattttaaaaaaaaacaatgttcaaatatagagataagtgtgtgagaggttggaatgcagattcacttgaaacttttgttgtttttgtctaatttctcacaatttcgaccaagtcctaattctattgcgttatagtagcttagagtacagacatgtgtagtccatcaacggacattctgttggaaatggaccaaacgctatccatgccaataaaagaaaaaaaatgtgttaataaagttaaccgcatccgatgtttttacaaaggttctttatacatgtaattcggcaattgaactgactttactttaattctaacctgaatggcaaatgcgttcaacgcaaatatttccaaacttccacggattcgtctcacacaaattaatgctatcttaagtagtgggaggaagatattagttttattttactaataattttctcagcgtcaattttcaatcgccacgtagtgcacgttggttctagttttcaaaaatgaagcgtgcctctagaaaaaggcgctgaaccgcccattttaagcgcatgagaaagtgaataagcgatgcacgccgaaacaatagtgcactcaacaccccccccccccgcgccatcttttgaattgctccatggtaccattttttttttcaattgcattacttcgttaaaatttgagctggttcgaattatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAACAAT-TT-GAAAAAT-A-TT-A-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------A-GTCAC--AGCAGC---------A--------GTTA-T-GAAT-ATT-CGCGAC-GTTATTGAACGACCTTATTCGTTTACTTTTCAT-G------------------CATCAC---AGAA-CG----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTAGAATATTCATAAAAAAAAC-CCA-CAT-CAA--TA--TATTTATA--AAATATCATGGAAA-ATGTTAGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--TA--CAT---G----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---GGATAATTATAATA----TAATAGT--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAAATTA----TTT-GTTT----TAAAGAT-T---GC--ATAG-TCT----------A---GTCATGTATCTATATATATT-CTAACCA-AAAAGACCAAAAAAGACGAGTACTTTATTTTTCCTA-T--TTGACGGTACATT---ggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|12 : GTAG-T-C-GCGG-TTT--CGG-AGCTTCTCATGATATACCCTCC-TATAAAATTTTGCCA-GGGG----TAT-CT-GACAATGATATA---T-CTACTGT-GTATAAA-TA-ATT-TTTCGATAAA-TAG-CACCG---TTTTAGTTATTAACGTTGTA--AC-AAT--AC------CATTGTTTT-ACAGTCA-CA-GACCTATG----GAG-ACTGATTT-CA------------TT-A--ATT-TTATAG-AAAATA--ACG-----GTACACTGACT-T-TTCT-TT--TTTGTTTGGTAT----AGCTT-AAA-TGGTCG-A--GA-AATTTGGT--GCTAGGTGTATCTT-CT--ATCA-T--TTAGCGTCAGGCATATGCGCGATAAGAGACCGTAAACGACCAG--AAACCATGCT-AAACAATCA-TT-G-GATTGCCAAAA--AAT-TAATGGGGA-TG-CCGAGCTCCGTTTTT---ATGAA-AT-AAGCATG-TTCCAGA-G-TGTT--GACT-------AAAAAC-----------CTGTCtaga
gi|13 : aaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGA----TAT-CTTGACAATA-TATA---TACTACTGT-GT-ACAT-TT-TTT-TTTCGATAAA-CAG-CACCG--TTTTTAGTAATT-ACGTTGTA--AA-CAT--AT------CATTGTATTAACAGTGCTCA-G-C---------AAG-ACTGCTTTCCA------------TTGG--ATT-ATATAG-AAAATA--ACG-----ATA-ATTAATT-T-T--TGTT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGCT--GCT--GT---TCTT-CTTGATGA-T-ATC---------TATAT------C-TAA---CA---------AA--AAACAAT-TT-G-AAAAT-ATTT-G-A--TGC-AAAA--AAT-T-AT-GGGT-AG-TCGAGCT-CGTTTTT---ATGAA-TA-AAAGATG-T--CAAA-G-T-TT--GA-TAAAAAAAAAAAACCAAAAAAAACAC-GTCAC--AGCAGCTGTTTTg
gi|14 : ta----AA--CATCAC---AAAAACA----ACGTTACCAACGCCCTGCAT---TGAAGGAAAATTCGAACATTCAT-AAAAAAAC-CCA-CTT-CAATTCA-TTATTTACA--AAATATCAAGGAAA-CTCTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----A-T---CGCCTATA--TA--TA--TGT---A----------TATAAATGGTAATAATG-A--TTGC-AG-T-AA-C-AAT---AGATAA-TAAAATA----T-A-AAAGTAATTAGAT-TAAT-TTT-GT-AT-A-TT-TG-AAT--CCAT--CGAAATTA-----TT-GTTA----TATA----T---AT--ACAG-TTTTTTTTTCTGAA---CTCATTTTTCTTTTT---TT-TT--------AAGG---------AGTATT-TTTCTTTTTTTC
gi|18 : aaaAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTGT-AAACG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCATCTACTTTTCAT-GCC-TTTCTTC----AA--CATTAC---AGAA-TA----TCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAA-CCT-CAT-CAAT----TTATTTAAAAGAAATGT----GAAT-ATGTTT-TTCAACTTTC--ATatccatcaattcccctctt
gi|19 : TG-A-CGTTA-T-AGAT-ATTGCGCGAC-GTCATTGAACGACGTTATTCATTTTCTTTTCAT-GCC-TTTCTTC----AA--CAACACCATAGAA-CA----GCGTTATTAACACCCTGCAT---TAAAAGGAAATTCAAATACTCATTAAAAA----CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATATTTGTAGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---GGCC--G---TA--TA--------------------AT-----------ATT-G--TCA-------AA-C-AAT---AGac
gi|2 : AACGCTTCATGTCA-ATAAAAGAAAAAAAAAAATGGGT-G-TAATAA-A-GTT-ACCGCGA-TCCG-ATG-TTTTTAACAAA--AGTG-TTTCTTT-ATACCT-GTAATACGGCA-AT--GA-ACTG-----C-TTACTTAAATTCTAACTTGTAT-GGCAATTGCGTTCAACGCA-AAT--AAATTTCCCAA-CTCCAC-GATTC-TCT---CA-ACACAT-AAAGCTAT-TGAAGTACAT-GTAATG-TAGAGT--GGG-AAAGATATTAG--TTA-TT-TA-TGAGTGATTCTCTCGAGTTCGTCCAAT-TTTCAAAATG-CACATATTGCACG-TGAGTC-TAGTTTTCAAAAATCAAAAGCGTGC---CTCTCTAGAATGAAGCGGCATGAACCGGCACTTTTTTAAGGCGCACTGAGAAAAGTGAATGAAACG-TG-ACGCCAGTAACAAT-GTATACTCAA-ACGCCCCC-CCCC-TTC----C---TCT-T-C----TCTTAATTGATCTCTTCCCATGGT-TCCA--TTTTTTACTC-ATTTCATTTTACTTT-TTAAAAATGTAGTTGTTTTCGA
gi|2 : AAACTACTAAATTAAAATAATG-----AAGAAAGAAA--AAAGAAAAATTTGTAAA-ACACGCTCGCTG-AT-CTCTGTATAT-TGTCTGTATTAAAAATACAGATAGAATAAGCCCCATATCACTTCATTcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaactactaaattaaaataatgaagaaagaaaaaagaaaaatttgtaaaacacgctcgctgatctctgtatattgtctgtattaaaaatacagatagaataagccccatatcacttcattgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|22 : aacgcttcatgtcaataaaagaaaaaaaaaaatgggtgtaataaagttaccgcgatccgatgtttttaacaaaagtgtttctttatacctgtaatacggcaatgaactgcttacttaaattctaacttgtatggcaattgcgttcaacgcaaataaatttcccaactccacgattctctcaacacataaagctattgaagtacatgtaatgtagagtgggaaagatattagttatttatgagtgattctctcgagttcgtccaattttcaaaatgcacatattgcacgtgagtctagttttcaaaaatcaaaagcgtgcctctctagaatgaagcggcatgaaccggcacttttttaaggcgcactgagaaaagtgaatgaaacgtgacgccagtaacaatgtatactcaaacgcccccccccttcctcttctcttaattgatctcttcccatggttccattttttactcatttcattttactttttaaaaatgtagttgttttcgacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGCAAGTTC--GTCCAAAGT--GTAGACGT-AAGTAAC-TGAACGA---GCA-TA--CA--T-----A----------TAT-----------ATG-T--TAGC-GGCT-AT-CGAATTTCAGAGAT-CCTAGTA------GTAAG-----TAGA--TCAT-TTT-ATAAT-GTTT-TG-AATCGCCATTCCAAGATGAAAAGTGT-G-TT----TAAAGTT-G---ACGAATAGTTCT----------A---GGTAGGTATgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|23 : TTTTCAAAA-T-GAA-GCGTGC---C--TCTAGAAAAAG-C-ACATGAACCGCAA--TTTT-AA-GCGCACTGAG-AAAATGAAG-AAACA-TGCATGCC-GAAACAAT-GCTCACTC-A-ATACCCCCACCCCACCCCCTGC---GCC-TCC---TTTTTAATTGATCTCTT--CATGGTATCCA--
gi|24 : ttt-CTTGATGA-T-ATT---------TATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCAAAAA--AAT-T-ATAGGGT-AG-TCGAGCT-CGTT--------------------TG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCATCTGTTTTCT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTC
gi|26 : TCCAAT-TTTCAAATCGCCACGTATTGCACG-GTGTCC-TAGTTTTCA-------------------C-CTCTAGAAAAAGGT-GCATGAACCG-AA--TTTTTAA-GCGCACTAAG-AAAGTGAAT-AAACC-TGCACGCC-GAAACAAT-GTTCACTC-
gi|27 : CGTAGGT-C-GCGGGTATA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----CAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCG-TTTTTTAGT
gi|28 : --TA--CA--TTTGCGA----------TA------------ATG-A--TCGC-AG-T-AA-C-AAT---AGACAA-TATAATA----T----AA--TAGTAAA--TAAT-TAT-TTCGT-T-CT-TG-AATC-CCAT--CAAGGTTA----CAT-GTAT----TAGTCATGT---AC--ATA
gi|3 : cgtgtaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCCC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTTGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ATG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTCGATCAGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AC-AAAGATG-T--TAAT-G-T-TT--GA-T-------AAAAAC-----------T-GTCAC--AGCAGCAGTTTTTT-AAATG-A-CGTTA-A-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCATTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-TA----GCGTTATTAACGCCCTGCAT---TAAAATGAAATTCGAATACTCATTAAAAACCC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCAC-AG-T-AA-C-AAT---AGATAA-TATGATACTTGT-ATAAAGGAATTAAAAATAAT-TT--ATAAT-A-TT-TG-AATC-CCAT--CAAAAT-A----TAT-GTTT----TAAAGAT-T---AC--ATAG-TCC----------A---GTCATGTATCTATAT---TCATTAACCA-AAA-GA---------ACGAGT-TTTTT------CTATT--TTGACG---CAT-----------------CCTCTTCC-AA-AA-TCA--------AAAACG---TTTTTAACAACAACGCAGTTCAA--A-AAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT--GT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAATACTTGTTG---CGTTATAG-AG-TCTTAA-A-GT----ACA---CATGAGCAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACTCGGAACCAAACGCTACG-TGAAC-TTCCATGTCA-ATAAAAAAAAAAAAA----CTGT-GTTAATAA-A-GTT-ATCGC-A-TCCG-ATG-TTTT--ACAAATTCGTA-TTTTTTTTATACAT-GTAATTCAGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-TAAATGCGTTCAACGCA-ATCTTATATTT--AAA-ATCCAC-GATTC-TTT---CA-ACACATAAAAACTATCTAAAGTAC-TTGTAATGAT-GAGTGGGGG-AAAGAAATTAGTTTTA-TT-TGCTGAGTTATTCTC--------GTCCAAT-GTTCAAATTGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTACGTTC-CTCTAGAAAAAG-C-GCATGAAACAC-A--TTTTTAA-GCGCACTGAG-AAAAGGAAG-AAACG-TGCATACC-GAAACAAT-GTTCACTC-ATATACCCCC-CCCC-TCC----CTTGGCC-T-TCTTTTTTTAATTGATCTCTT--AATGGTATCCA--TTTTC--CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTATAATTATG-----AA--AAGAAA-GAAAGAAATATTTGTACA-ACAC---CACTGTTTCCTCAGTATTTGTGTCTGTATTCAAAATACATAT-AA--AAGC----TATCACTTCATTtacatgt
gi|30 : AAAAA-A-GTT-GCCAA-A-TCCG-ATG-TTTT--ACAAATTTGTATTTTTTTTTATACAT-GTAATTCGGCA-A
gi|31 : T--GTAGATTT-A-----C-T---CGCC--GCTATA--CA--TGT---AAAATATACCGTAT-----------ATG-A--TCGC-A
gi|32 : TTT--GC-TGTTTT--GT-CTAAT-TT-TC-ATAAT---T-T-CGAT-CA-AGTTCCTAAT-
gi|33 : ACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-
gi|34 : TAGGT-C-GCGGGTTTA-CAG-ACCTTCTC--GAAAA-CCCTCC-T
gi|35 : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--
gi|5 : tttaCGTAGGT-CCGCGGGTTTAACGG-ACTTTC-----GAAACCCCTC--TG-AAATATT-GACA-GAGGG---TA--CTTGACAATG-TATAATATACTACTGT-GTTAAAA-TTTATTATTTCGA--AA-CAGGCACCGCTTTTTTAGTAATTCACGTCATA--AAACAT--AC-------ATTGTTTTAAC-G----CA-G-C---------GAG-ACTGTTTCC--------------TTGA--ATTTATAT-G-TAAATAGTAAG-----GTG-ACTGACT-T-T--TACT--GTTG-ATA-TTC----AGCTTAAAA-TG---G-ACAGAGAATTGGTT--GCT--GT---TCTTACTTGATGA-T-ATG---------CATAT------AAAAA---CA-AAA----CAACAAAACAAT-TT-GGAAACT-A-TT-GCA--TGC-AAAA--AAT-T-ATGGGGT--G-TCGAGCT--GTTTTT---ATGAA-ATTAAAGATG-T--CAAAAG-T-TTTGGA-T-------AAAAAC-----------C-GTCCT--AGCAGCTGTTTTTT-CAATG-G-AGTTA-T-AAA--ATT-CTCGACCGTCACTGA-CGA---TATTCAT--ACTCT-----GC--TTTCTTC----AA--AAACAC---ACAC-CATGAAG-GTTATTAACGCCCTG--T---TAAAAGGAAATCTTGATACTCATTAAAAAA-C-CCA-CATTCAATATA-TCATT---A--AAATATCAAGGAAATATATT-GT-GAAATTTC--GTCGA---T--GT-GATT--A-----C-T---CGCC--GC--TA--TACTTGT---A----------CAT-----------TTGTA--TAGT-AG-TTCG-C-AGT---A-AT---TATAATA----G-ATGAA----TTAAA--TAATGTTT-ATAAT-T-TC-TG----T-CCAT--CAAATTTA----TTT-GTTTA---TAAAATT-T---AC--AAAG-TCT----------A---GTCATG-GTCTA-AT---TT---AACCA-AAAAGA---------GAGAGT-TGGTTTTTTTTCTA-T--TTGACGATACATTTA-G-AAGATCCA---CCTC-TCC-AATAA-TTACCGGTAATAAAACTCTTTTTTTAA-AACAA-GCAGATCAA--ATTAT---TAA-TAATA--TTT---AGCTTGG-AATGCAA-GATTCAC-TGAAACTATTAT--GCATGTTTT-TGTGCT-AT-TT-TT-ACAAT---TAT-CGA--C-CATTTCCTAAT-CCTGGTG---CGTTATAGCAGCTCTTAG-A-GTAAGGACA----ATGGGTAGT--CCATTCCACGG--CATT-CA-TGTTGG-AACT--AGACCA
gi|6 : TC-ATAAT-T-TT-T---ATC-CC--------CTTA----TTTTATTTCGGATATATAT-TTAAAC--TTAT-TCT----------ATCTGACATGTATATATG---------AATCATAAGATAG--------AGGAGT-ATTTTTTCTTTCTATT--TAGACGATATATTTAAA-AAGA--CAAACCCTCTTCCCAA-AACTCAC---TA--AAA-CGC--TTTTTATAAAAAACGC---TTAATCA-CAT---CATGTAATC---------GCTTGGCAATGC-ACGAATCACTTGATAA--TTCTTCGC-TGTTTTGTCT-CTACTGTT-TCTACAAT---T-TTCGAGCCACGTTTCCTAAT-CCTGCTGGTTCATTATAG-AG-TCTTAGCACGT----ACA--CGAAGAGTAGTAGCCA-TCCACGGAACATTTCACTATTGTAA-CT--G-ACCAAACGCTACGGTTAAC-CTTCTTGTCATATAAACGAAAAGGAA----G-GTCGGTAAGAATATGTT-ACTGA-AATCCGTATG-TTT---ACAAAT-CGTG-TTTCTT--ATACTTTGTAATTCGGCACATCTGACACTGCATGAC-TTACCTAAATTCTTAACTGAAT-G-CAAATGAGTTCAACTCATAAC--ATATTTCCAAA-ATCCAC-GATT--TCTAGTCA-ACA-ATAAAAGCCATTTAAAGTAA-T-AAAACA-T-GACTGGGGATAAAGAAATTAGTTTTA-TTGTACTGGGTGATTCTCTT----TTGTCCAATGTTTCAAATCGTCACGTATTGCACG--GGTCCTTAGTTTT
gi|7 : TAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-----------------A-CAG-CACCGTTTTTT-AGTAATT-ACGTTGTA--AA-CAT--ACATGTACCATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TTTTGTTGTATA-TTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-ACA----CAA--A----------------T-A-TT-G-A--TGCAAAAA--AGT-T----GGGT-AG-TCGAGTT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA---T-TT--GA-T-------AAAAAC-----------CGGTCACA-AACAGCATTTTTTT-TAATG-A-CGTTA-T-GAAT-ATT-CGCGAC-GTTAT------------TTCGTTTAC-TTTCAT-GCT-TTTTCTCAAAAAA--CATCACAA-AGAA-CA----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTCGAATATTC-CTAAAAAAAtca
gi|7 : AAAAAAAC-AAAACAT-CAATTTA-TTATTGATA--AAACATCAAGGAAA-ATGTTAGTTGAAATTTC--GCCGC---T--ATACATGT-A-----CAT---TATC-------A--CA--------------------GT-----------ATG-A--TCGC-AT-T-AA-C-AAT---GGATAA-Taaaaaaaaaaaaacaacaaacaacaacaaaaaaacaaaacatcaatttattattgataaaacatcaaggaaaatgttagttgaaatttcgccgctatacatgtacattatcacagtatgatcgcattaacaatggataattataatataat
gi|8 : taggtcgcgggtttacggaccttctcgaaaacccctcctaaaaattttacagaggtatcttgacaatgtatatactactgtgtaaaaaacagcaccgttttttagtaattacgttgtaaacatacatgtaccattgttttaacagcagcgagactgttttccgttgaattatatagaaaataacggtaactgacttttttttgttgtatattcagcttaaaatggagagaatttggtgctgttcttcttgatgatattcatatcaaaacgacacaaatattgatgcaaaaaagttgggtagtcgagttcgtttttatgaaataaagatgtcaaatttgataaaaaccggtcacaaacagcattttttttaatgacgttatgaatattcgcgacgttatttcgtttactttcatgctttttctcaaaaaacatcacaaagaacagcgttattaacgccgtgcattaataaaaggaaattcgaatattcctaaaaaaaaaaaaaaaaaaaacaacaaacaacaacT---AAATGA-TATAATA------GTAAA-----TAAA--TACT-TTG-GTAAT-A-TT-TG---TC-GCAT--CAAATTTA----TTT-GTTT----TAAAGAT-T---GC--ATAA-TCT----------A---GTCATGTATCTCTAT---TC-T-AACCA-AATATA----------CGAAT-TTTTTTTTTTATTATTATTTGACGATACATT---T-AG------------------AA-GA-TCAT---TAT-AAAACGC--CTTT-AACAACAACGCAGTTCAA--A--AT---TAT-TAATAATTTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT--GT-CTAAT-TC-TT-ACAATATGT-T-CGA--CCAAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACACGACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAA-CT--GGACCAAACGCTACG-TGAAT-CTTCATGTCA-ATAAAAGGAAAACAA-----TGT-GATAATAA-A-GTT-ACCGC-A-CCCG-ATG-TTTT--ACAAATTCGCA-TTT--TTGATACAA-GTAATTCGGCA-AT-TCA-ACTG----AC-TTACTTAAATTTTAAACTGAAT-G-CAAATGTGTTCAATGCA-tataatataat
gi|9 : actaaacatttttttttttttaattaagaaatcataagaatttttcggtcgtcaattcatagattttttgttaagccatgcagtttagagattatGTAGGTGC-GCGGGTTTA--GG-ACCTTCTC--GAAACCCCGTCCCTA-AAAATTT-GACATGGGG----TAT-CTTGACAATG-TATA---TACTACTGTTGTAAAA--TT-ATT-TTTCGATAAAACAG-CAGCCTTTTTTTAGTTATT-AC-TTGTAGAAA-CAT--AC-------ATTGTTTTAACAG----CA-G-CAGTACCATTGAGGACTGTGTTTCGCGAGTGTGTGGGTGGAGGATT-ATATAG-AAAATA--ACGTGTGTGTA-ACTGACTGTGT--T-TT--GTTGTATA-TTC----AGCTTAAAAGTG---GGA--GTGAATTTGGT--GCT--GT---G-TT-CTTTATGACT-ATT---------CATATT-----CAAAA---CG-AAA----ACA--AAACAAT-TTTGAAAAAT-A-TT-G-A--TCCGAAAAACAATGT-ATTGGG--AGTTCGAGCT-CGTTTTT---ATGAATAT-AAAGATG-T--CAAA-GTT-TT--GA-TAA-----AAAAAC-----------T-CTCGCTGAGCAGCAG-TTTTT-AAATG-ATCGTTATT-GAAT-ATT-CGC
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): AAGTTTCTTCATCATTTTCGCATTTTCGAATGTTAAAAAAATGTGCATGCATACAAAAGACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGGGCAGGGTGAATGTGACCGAAAACTCTTGTGACTAGCGAAGATGAAAAAGACGGAATAAACAAGTGATTCATACACATCCGAAAAATATTAAGATCAATTTTTAACATTATATTTTTGCCAGTATCGACTTTGAATCGGTTTGCTCATTTTTCAAAATCAAATGGCCTTTTTCCCCAATGAATTATTTGCACAGGTGCGCCATAATGCAATATACCGACAGTGGTGAAATCCGGGTGAACATTGTGTAATGTCACTATAACAATAGATTTTTGCCTAGTATGGTAAAGGAAGAACGAAAGAACGTGTTTGGCGATTTCTAATGCAAGTTTTAAAATATTATCAACGTAGAAAAGAAGATAAGTTTGTCTATCCCAAGATAAGAAATGATAAAACATGTATAAGGTAACGAAACTGTTTGTGTCATTGTATCATGCCTCTAGTGTCCGTTTCTGTAACCTTGTCTGTATTTATGGCAAATACAGATAATACTGTACCAATGCATATCATAGTGCATAATAAACATTGTGATTTTACAATTAAAGCATGTGACGAGTTTAGTTTTCTCGTTTATTATTAAATTTATTGTTTGTGATCAAAAATGAAAACCATACTGTGCATAATATATTAAAGTGTATTTTATCCGTCTCTCTTTGTCTGAAAATTTTAAAGAGTGTTCTGCTAATACGCGTCAAATTTCCTGAATAAAACCTTTAAAGTGCCCCACATGGTCTCCCCTTTCTAACTTTTCTCCGTAAAAGATTGCACCCAGCTTCATATTTTTCCCGAAAACTGTCGCTGTTATTACTTTATCATATAAATTCATCTGCCTTGCGTCGAAATGAAAGGATAGACTTTACGATAGTAAACGAAAACATTGATACTATCTAAAGCATGATTAAAGCAATTTGTTGTT
Unaligned ( gi|11 ): CCATTTGGTCCTGAAGAAATTTTAGAGTGTCCGCTACATACGCGTCAAACTTTCTGAATAAAACTTAAAAGTGCATGGATCTCCTGCCTAAATTTTCTGCTAAAGTTGTCAGCCTGTCTTCGCTTTCCCCCAAAATTGTCCGCTTTTAGACTTCATAAAATTAAAGGGACTGGAAACGCGTTATCTCAAAAGTTTTGCATCGGAAAACGAAAGGCGAAGACTTACAAACTTAAATGAAACCTGATATCACCTTCAATATGGTAAAAGCAGCTGTTGTTAATAGTTCATAATTGAGTATCATCGGTAATTTTAATTTTTACGCCTCCTTTCTATCAACGCAATTGACGTCACAATGAAATGTACACACGAACCAAAAGATTCGACGCGTTAGATTTTGCGTTACCCCAAAATCGCTGACGTAGGCAAACCCGCGACCTACGTTATAAATCATAAAGTCGCAA
Unaligned ( gi|15 ): TCTAAAGTGCTATGAGTCTCCTGGCCTAATTTTCTGTAAAGTTTGGGTGGACATGTCAGAATAAAAGGGATGAAACGTGAACTATCTCAAGTTTTGCATTGGAAACGAAAGGAAGACATTCGAAATGAAACGAAACCTTAATATACCTCAGTATGTTAAAGCAGCTGTAGTTAATACTCATAATTAATATCGGTAATTTTTTACGCTCTTTATCATCAGTCAATACTATCAACGCAATCGTTACGTCACCATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGAAATGCGTACCCCAAAACCGTGACGTAGGCAAACCCGCGACCTACGTTA
Unaligned ( gi|16 ): TTTGCATCGGAACTGAGTCCCAAGGAAGACTTAATCGAGAAATAAGAGCGAGAACCTTGATTATACCCTCTTTGGTGTAATGCTGGTTTTAGGAGGCCTAAACAGGCAGCCTATTTGTTAATATCTAAAGTGCATATCGGTAAAGTTTTTACGCTCTCTATCATCAGTCAATCTATCAAAGAATTGCTTACGTCACAATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGGATTTTGCGCCCGGTACCCACAAAACTGCCGCTGTTACGTAGCCGAAAAACGCTGCGACC
Unaligned ( gi|17 ): TAATGAAAAAGAAAAAAAGTACAGAAATATTTGTAAAACATTCTGGAAAATTCTTTCCATGGCCATGTAGTAATATGATATGTTTGTATTCAAAATATAGACATGTATATAAAGCTACTAAATTAGATCACAATCTTACCCGCTTCAATGGTATTGACTATGGGTTAATATTTCAGTTTCCCCGGAACCTTCTCACAGTAATAAGGCAAACGATTTAAGTATCAATTAATAATCTTATTATATTCTTTTTACATCACTTTCCACCCAT
Unaligned ( gi|20 ): CCTCTGTAAGAATTGATATTATAACAGGATGGAATGCTTACCTCGAATTTTGCATCGGAAACGGAAGAAAAGACTCTTAGAAAATTAAACGAAGCATGATATATTTCAATATGATGAGATAATTTAAATTTAAACGCTTATAAATCTATTCACTACGCTAATTGTTACATGACCTACTCACAATGAAATGTGCACGAAAAAAGACCAATCGTAA
Unaligned ( gi|21 ): CAAATATTTTCCCATCGGAATCGAAAGGAAGCAAAATTAAATGAAACATATTCATATCGGTAAAAAATTGAAATCTTTATTATCTATGCACAACATAAAGGCAATTGTTACGTCACAATTGAAAGTACACAGAAAAAGACGTCGAGTCGTAAGATTTGCGTACCCCAAAGCCGTGACGTAGGCAAACCCGCGACCTACGTTAAACTATAAAT
Unaligned ( gi|25 ): TATTGCGTTAACGTAATTTCAACCAAAAATGACATTTTGACAACTCATTTTACCACATCAGAAATGAATGAAAGGATAAATGATAGGGGCTGGGATCATGCTCCATGTCTCTAGTGCATGTGATCTGTACCCTTGTTTGTATATGAA
Unaligned ( gi|29 ): CGAACTAAATTTTTTTTTATTAAGAAATCATAAAAAAATTTCGTCCAATCATAATTGTTGTTAAGCCATCAGTTGAAAGATTATTAAATGATAGTGAAATAAAA
Alignments
lowQualScore : 1 1111 1 1 2222222 2222 333333333 222222222222 11 11 11111 1 1 1111 111 111 222222222 111111 1111 1 1111111 2222222222222 11 1111 111 1111 111 11111 111111 444444444444444444444444444444444 44444444444444 11 111 1111 11111 22222222222222 222222222 33333333333 666666666666666666666666666666666666666666 111111 1 11111 111 22222222 11 22 111 11111 111 1 1111 333 11 11111 1 333333 111 11111 2222 11 1 11 111 1 44444444444444 1 1 1 33333333 11 1111111 1111 111 22222 1 1 1 4444444444444444444 11 11 22 1 1 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 22 1 222 1 33 33333
lowQualScore : 4 4 4 4 55 2 4 5 0 5 5555 5 5 888 5 0 55 5 5 0 5 5 1 0 1 1 77 5 77 0000000 2222 5 5 777777777 5 999999999999 55 77 5 33 44444 5 5 5 77 1 77 4 2222 5 000 5 77 77 77 000 5 5 5 000000000 999999 888 5 0000 66 4 4 1 4 4 4 4 55 3 55 3 3 0 3 3 4 777 4 66 4 55 4 4 4 55 4 8888888 2222222222222 55 5 5 4 4 4 4 4 4 5 5 1 11 1 0 5 88 0000 66 555 5 0000 777 3 666 5 5 3 5 0 66 5 9 66 3 66 4 11111 4 777 555555 55 555555555555555555555555555555555 6666 4 4 4 4 4 777 4 11111111111111 11 5 55 000 4 999999 66 2 9999 4 3333 4 11111 66 5 66666666666666 111111111 5 5 33333333333 5 55 7 99 3 1 666666666666666666666666666666666666666666 666666 5 5 3 666 99999 444 8 22222222 8 8 8 0 11 99 6 22 6 6 6 6 111 6 6 99999 1 6 444 6 88 8 8 7777 444 1 11 8 88 8 88 0 22222 3 2 0 2 8 8 777777 8 8 6 6 6 6 6 6 6 99 555 6 66 7 6 6 88 8 77777 8 8 8 8 3333 2 11 0 22 777 0 8 9 6 1 22222222222222 2 0 1 3 0 0 2 2 0 77777777 8 0 3 33 8 0 4444444 9999 8 111 0 00000 0 8 8 88 8 8 8 1 8 0 0 0 4444444444444444444 3 33 66 33 00 7 7 3 3 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 00 3 555 0 3 6 7 6 7 7 11 55555
lowQualScore : . . . . .. . . . . . .... . . ... . . .. . . . . . . . . . .. . .. ....... .... . . ......... . ............ .. .. . .. ..... . . . .. . .. . .... . ... . .. .. .. ... . . . ......... ...... ... . .... .. . . . . . . . .. . .. . . . . . . ... . .. . .. . . . .. . ....... ............. .. . . . . . . . . . . . .. . . . .. .... .. ... . .... ... . ... . . . . . .. . . .. . .. . ..... . ... ...... .. ................................. .... . . . . . ... . .............. .. . .. ... . ...... .. . .... . .... . ..... .. . .............. ......... . . ........... . .. . .. . . .......................................... ...... . . . ... ..... ... . ........ . . . . .. .. . .. . . . . ... . . ..... . . ... . .. . . .... ... . .. . .. . .. . ..... . . . . . . ...... . . . . . . . . . .. ... . .. . . . .. . ..... . . . . .... . .. . .. ... . . . . . .............. . . . . . . . . . ........ . . . .. . . ....... .... . ... . ..... . . . .. . . . . . . . . ................... . .. .. .. .. . . . . ............................................................................. ......... .. . ... . . . . . . . .. .....
lowQualScore : 0 0 0 0 55 0 4 0 0 0 6666 0 0 888 0 4 44 0 0 1 0 0 2 1 4 4 99 7 99 7777777 1111 7 7 111111111 7 333333333333 77 44 7 66 33333 7 7 7 99 4 99 1 1111 7 000 7 99 99 99 000 0 0 0 000000000 444444 888 0 6666 99 0 0 3 0 0 0 0 55 9 55 6 6 5 6 6 0 000 0 44 0 55 0 0 0 55 0 5555555 7777777777777 00 1 0 4 4 4 4 4 4 0 0 4 44 4 1 7 77 6666 99 666 0 6666 555 6 222 0 0 4 0 1 99 0 8 11 2 11 4 11111 4 888 111111 55 555555555555555555555555555555555 1111 0 4 4 4 4 000 4 00000000000000 99 0 22 222 4 000000 11 6 4444 4 9999 7 33333 11 0 66666666666666 111111111 7 0 11111111111 7 11 3 22 5 7 222222222222222222222222222222222222222222 888888 6 0 2 666 00000 000 0 22222222 0 0 0 8 00 22 7 22 7 7 7 7 777 7 7 77777 0 7 000 0 88 0 0 0000 444 4 00 0 88 0 88 8 66666 2 5 0 5 0 0 666666 0 8 7 7 7 7 7 7 7 22 555 7 88 2 7 7 88 0 88888 0 0 0 0 8888 5 00 0 55 555 0 8 8 5 2 00000000000000 5 0 0 2 0 0 5 5 2 00000000 0 8 2 66 0 8 6666666 0000 0 222 8 66666 8 0 0 66 0 0 0 0 0 0 0 0 8888888888888888888 2 88 55 88 77 3 3 3 3 00000000000000000000000000000000000000000000000000000000000000000000000000000 777777777 00 3 000 7 3 7 3 7 3 3 77 77777
consensus : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATT---A-AAGATCCA---CCTCTTCC-AA-AA-TCAC---TA--AAAACGC--TTTTTAACAACAACGCAGTTCAA--A-TAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TCT---CA-ACACATAAAAGCTATCTAAAGTAC-T-GTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTCG---TCGTCCAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAAAAAGGC-GCATGAACCGCNA--TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GCC-T-C---TTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
Reference ( family-200 ) : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATT---A-AAGATCCA---CCTCTTCC-AA-AA-TCAC---TA--AAAACGC--TTTTTAACAACAACGCAGTTCAA--A-TAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TCT---CA-ACACATAAAAGCTATCTAAAGTAC-T-GTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTCG---TCGTCCAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAAAAAGGC-GCATGAACCGCNA--TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GCC-T-C---TTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
gi|1 : ACGTAGGG-C-GCGGGTTTA-CGGGACCTTCTC--GAAA-CCCCTCC-CG-AAAATTTTGACA-GAGGAGATTATTCTTGACAATG-TATA---TACTACGGT-TTAAAAAATT-ATT-TTTCGATAA--CAG-CACCGTTTTT--AGTAAT--ACGTCGTA--AA-CATTTAC------CATTGCTTTAATAG----CACG-C---------GAT-ACTGTATGCCG------------TTGATTATT--TATAGGAAAATAT-ACG-----GTG-ACTGACT-T-T--T-TC--TTGGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATGTGGTTTGCT--GT---TCTT-CTTGATGA-TGATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-T---GAAAAT-A-TTTG-A--TGC-AAAA--AAT-T-ATGGGGTCAG-TC-AGCT-CGTTTTTTGAGTGAA-A--AAAGATGCT--CAAT-G-T-TT--GA-T-------AAAAAC-----------C-GTCACC-AGTAGCTGTTTTTTTAAATGGA-CGTAA-TTAAATTATT-CGCGAC-GTCAT-GAACGACGTGATTCATTTACTTTTCATTGCCGTTTCTTC----AAAACATCAC---AGAA-CA----GCGT-ATCA-CGCCCTGCAT---TAAAAGGAAGT--GAATACGCATAAAAAAAAAACCA-CAT-CAATTTAATTAATTATA--AGATATCAAGGAAA-ATGTT-GTTGAAATTTTCTGTCGAAAGTTGGTAGATTTTA-----C-T---CGCC--GC--TATACA--TGTT--A----------T-T-----------ATG-GATTCGCTAG-T-AAAC-AAT---AGATAA-TGGTAT-----T-ATGAAT-AATTAAA--TAAT-TTTTATAATCA-TTCTGTAA---CCAT--CA---TTA----TTT-GTTT----TAAAAAT-----AC--ATTG-TCT----------AA--GTCATGTATCTATAA---TT-CTAACCA-AAA-GA---------CAGAGG-TGTTTTTTT--CTATT--T-GACGATACATT---AGAAGATCCA---CCTCTCTC-AA----TT-T---TA--AAAA----------AA-AACAATG---TTCAA--A-TATAGAGAT-AAGTG--TGTGAGAGGTTGG-AATGC-A-GATTCACTTGAAAC--TTTT--GT-TGTTTT-TGT-CTAAT-TTCTC-ACAAT---T-T-CGA--C-CAAGTCCTAAT-TCTATTG---CGTTATAGTAG--CTTAG-A-GT----ACAG-ACATGTGTAGT--CCA-TCAACGGA-CATT-C--TGTTGGAAA-T--GGACCAAACGCTA----------TCCATGCCA-ATAAAAGAAAAAAAA-----TGT-GTTAATAA-A-GTTAACCGC-A-TCCG-ATGTTTTT--ACAAA-----G-GTTC-TTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----ACTTTACTTTAATTCTAACCTGAATGG-CAAATGCGTTCAACGCA-A----ATATTTCCAAACTTCCACGGATTCGTCT---CACACAAATTAATGCTATCTTAAGT---------------AGTGGGAG-GAAGATATTAGTTTTATTT-TACT-AATAATTTTCTCA---GCGT-CAAT-TTTC-AATCGCCACGTAGTGCACGTTGGTTC-TAGTTTTCAAAAAT-G-AAGCGTG----C-CTCTAGAAAAAGGC-GC-TGAACCGCCC--ATTTTAA-GCGCA-TGAG-AAAGTGAAT-AAGCGATGCACGCC-GAAACAATAGTGCACTC-A-ACACCCCC-CCCC-CCCG---C---GCCAT-C---TTTTGAATTG----CTC--CATGGTA-CCATTTTTTTT-TTCAATTGCA--TTACTTCGTTAAAATTTGAGCTG-GTTCGAATT
gi|1 : taAAATTATGTAAGAAA--AAGAAAAGAAAGAAAAATTTGTGAATACACG--CACTG-TTCCTCTGT-TATGTGTCTGTATTC-AAATACATATAAAT-AAGC-----ATCACTTCATTatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaaattatgtaagaaaaagaaaagaaagaaaaatttgtgaatacacgcactgttcctctgttatgtgtctgtattcaaatacatataaataagcatcacttcattggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|10 : taacgtagggcgcgggtttacgggaccttctcgaaacccctcccgaaaattttgacagaggagattattcttgacaatgtatatactacggtttaaaaaattatttttcgataacagcaccgtttttagtaatacgtcgtaaacatttaccattgctttaatagcacgcgatactgtatgccgttgattatttataggaaaatatacggtgactgactttttcttggtataattcagcttaaaatggagagaatgtggtttgctgttcttcttgatgatgattcatatcaaaacgaaacaaaaacaattgaaaatatttgatgcaaaaaattatggggtcagtcagctcgttttttgagtgaaaaaagatgctcaatgtttgataaaaaccgtcaccagtagctgtttttttaaatggacgtaattaaattattcgcgacgtcatgaacgacgtgattcatttacttttcattgccgtttcttcaaaacatcacagaacagcgtatcacgccctgcattaaaaggaagtgaatacgcataaaaaaaaaaccacatcaatttaattaattataagatatcaaggaaaatgttgttgaaattttctgtcgaaagttggtagattttactcgccgctatacatgttattatggattcgctagtaaacaatagataatggtattatgaataattaaataatttttataatcattctgtaaccatcattatttgttttaaaaatacattgtctaagtcatgtatctataattctaaccaaaagacagaggtgtttttttctatttgacgatacattagaagatccacctctctcaattttaaaaaaaaacaatgttcaaatatagagataagtgtgtgagaggttggaatgcagattcacttgaaacttttgttgtttttgtctaatttctcacaatttcgaccaagtcctaattctattgcgttatagtagcttagagtacagacatgtgtagtccatcaacggacattctgttggaaatggaccaaacgctatccatgccaataaaagaaaaaaaatgtgttaataaagttaaccgcatccgatgtttttacaaaggttctttatacatgtaattcggcaattgaactgactttactttaattctaacctgaatggcaaatgcgttcaacgcaaatatttccaaacttccacggattcgtctcacacaaattaatgctatcttaagtagtgggaggaagatattagttttattttactaataattttctcagcgtcaattttcaatcgccacgtagtgcacgttggttctagttttcaaaaatgaagcgtgcctctagaaaaaggcgctgaaccgcccattttaagcgcatgagaaagtgaataagcgatgcacgccgaaacaatagtgcactcaacaccccccccccccgcgccatcttttgaattgctccatggtaccattttttttttcaattgcattacttcgttaaaatttgagctggttcgaattatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAACAAT-TT-GAAAAAT-A-TT-A-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------A-GTCAC--AGCAGC---------A--------GTTA-T-GAAT-ATT-CGCGAC-GTTATTGAACGACCTTATTCGTTTACTTTTCAT-G------------------CATCAC---AGAA-CG----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTAGAATATTCATAAAAAAAAC-CCA-CAT-CAA--TA--TATTTATA--AAATATCATGGAAA-ATGTTAGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--TA--CAT---G----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---GGATAATTATAATA----TAATAGT--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAAATTA----TTT-GTTT----TAAAGAT-T---GC--ATAG-TCT----------A---GTCATGTATCTATATATATT-CTAACCA-AAAAGACCAAAAAAGACGAGTACTTTATTTTTCCTA-T--TTGACGGTACATT---ggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|12 : GTAG-T-C-GCGG-TTT--CGG-AGCTTCTCATGATATACCCTCC-TATAAAATTTTGCCA-GGGG----TAT-CT-GACAATGATATA---T-CTACTGT-GTATAAA-TA-ATT-TTTCGATAAA-TAG-CACCG---TTTTAGTTATTAACGTTGTA--AC-AAT--AC------CATTGTTTT-ACAGTCA-CA-GACCTATG----GAG-ACTGATTT-CA------------TT-A--ATT-TTATAG-AAAATA--ACG-----GTACACTGACT-T-TTCT-TT--TTTGTTTGGTAT----AGCTT-AAA-TGGTCG-A--GA-AATTTGGT--GCTAGGTGTATCTT-CT--ATCA-T--TTAGCGTCAGGCATATGCGCGATAAGAGACCGTAAACGACCAG--AAACCATGCT-AAACAATCA-TT-G-GATTGCCAAAA--AAT-TAATGGGGA-TG-CCGAGCTCCGTTTTT---ATGAA-AT-AAGCATG-TTCCAGA-G-TGTT--GACT-------AAAAAC-----------CTGTCtaga
gi|13 : aaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGA----TAT-CTTGACAATA-TATA---TACTACTGT-GT-ACAT-TT-TTT-TTTCGATAAA-CAG-CACCG--TTTTTAGTAATT-ACGTTGTA--AA-CAT--AT------CATTGTATTAACAGTGCTCA-G-C---------AAG-ACTGCTTTCCA------------TTGG--ATT-ATATAG-AAAATA--ACG-----ATA-ATTAATT-T-T--TGTT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGCT--GCT--GT---TCTT-CTTGATGA-T-ATC---------TATAT------C-TAA---CA---------AA--AAACAAT-TT-G-AAAAT-ATTT-G-A--TGC-AAAA--AAT-T-AT-GGGT-AG-TCGAGCT-CGTTTTT---ATGAA-TA-AAAGATG-T--CAAA-G-T-TT--GA-TAAAAAAAAAAAACCAAAAAAAACAC-GTCAC--AGCAGCTGTTTTg
gi|14 : ta----AA--CATCAC---AAAAACA----ACGTTACCAACGCCCTGCAT---TGAAGGAAAATTCGAACATTCAT-AAAAAAAC-CCA-CTT-CAATTCA-TTATTTACA--AAATATCAAGGAAA-CTCTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----A-T---CGCCTATA--TA--TA--TGT---A----------TATAAATGGTAATAATG-A--TTGC-AG-T-AA-C-AAT---AGATAA-TAAAATA----T-A-AAAGTAATTAGAT-TAAT-TTT-GT-AT-A-TT-TG-AAT--CCAT--CGAAATTA-----TT-GTTA----TATA----T---AT--ACAG-TTTTTTTTTCTGAA---CTCATTTTTCTTTTT---TT-TT--------AAGG---------AGTATT-TTTCTTTTTTTC
gi|18 : aaaAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTGT-AAACG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCATCTACTTTTCAT-GCC-TTTCTTC----AA--CATTAC---AGAA-TA----TCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAA-CCT-CAT-CAAT----TTATTTAAAAGAAATGT----GAAT-ATGTTT-TTCAACTTTC--ATatccatcaattcccctctt
gi|19 : TG-A-CGTTA-T-AGAT-ATTGCGCGAC-GTCATTGAACGACGTTATTCATTTTCTTTTCAT-GCC-TTTCTTC----AA--CAACACCATAGAA-CA----GCGTTATTAACACCCTGCAT---TAAAAGGAAATTCAAATACTCATTAAAAA----CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATATTTGTAGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---GGCC--G---TA--TA--------------------AT-----------ATT-G--TCA-------AA-C-AAT---AGac
gi|2 : AACGCTTCATGTCA-ATAAAAGAAAAAAAAAAATGGGT-G-TAATAA-A-GTT-ACCGCGA-TCCG-ATG-TTTTTAACAAA--AGTG-TTTCTTT-ATACCT-GTAATACGGCA-AT--GA-ACTG-----C-TTACTTAAATTCTAACTTGTAT-GGCAATTGCGTTCAACGCA-AAT--AAATTTCCCAA-CTCCAC-GATTC-TCT---CA-ACACAT-AAAGCTAT-TGAAGTACAT-GTAATG-TAGAGT--GGG-AAAGATATTAG--TTA-TT-TA-TGAGTGATTCTCTCGAGTTCGTCCAAT-TTTCAAAATG-CACATATTGCACG-TGAGTC-TAGTTTTCAAAAATCAAAAGCGTGC---CTCTCTAGAATGAAGCGGCATGAACCGGCACTTTTTTAAGGCGCACTGAGAAAAGTGAATGAAACG-TG-ACGCCAGTAACAAT-GTATACTCAA-ACGCCCCC-CCCC-TTC----C---TCT-T-C----TCTTAATTGATCTCTTCCCATGGT-TCCA--TTTTTTACTC-ATTTCATTTTACTTT-TTAAAAATGTAGTTGTTTTCGA
gi|2 : AAACTACTAAATTAAAATAATG-----AAGAAAGAAA--AAAGAAAAATTTGTAAA-ACACGCTCGCTG-AT-CTCTGTATAT-TGTCTGTATTAAAAATACAGATAGAATAAGCCCCATATCACTTCATTcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaactactaaattaaaataatgaagaaagaaaaaagaaaaatttgtaaaacacgctcgctgatctctgtatattgtctgtattaaaaatacagatagaataagccccatatcacttcattgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|22 : aacgcttcatgtcaataaaagaaaaaaaaaaatgggtgtaataaagttaccgcgatccgatgtttttaacaaaagtgtttctttatacctgtaatacggcaatgaactgcttacttaaattctaacttgtatggcaattgcgttcaacgcaaataaatttcccaactccacgattctctcaacacataaagctattgaagtacatgtaatgtagagtgggaaagatattagttatttatgagtgattctctcgagttcgtccaattttcaaaatgcacatattgcacgtgagtctagttttcaaaaatcaaaagcgtgcctctctagaatgaagcggcatgaaccggcacttttttaaggcgcactgagaaaagtgaatgaaacgtgacgccagtaacaatgtatactcaaacgcccccccccttcctcttctcttaattgatctcttcccatggttccattttttactcatttcattttactttttaaaaatgtagttgttttcgacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGCAAGTTC--GTCCAAAGT--GTAGACGT-AAGTAAC-TGAACGA---GCA-TA--CA--T-----A----------TAT-----------ATG-T--TAGC-GGCT-AT-CGAATTTCAGAGAT-CCTAGTA------GTAAG-----TAGA--TCAT-TTT-ATAAT-GTTT-TG-AATCGCCATTCCAAGATGAAAAGTGT-G-TT----TAAAGTT-G---ACGAATAGTTCT----------A---GGTAGGTATgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|23 : TTTTCAAAA-T-GAA-GCGTGC---C--TCTAGAAAAAG-C-ACATGAACCGCAA--TTTT-AA-GCGCACTGAG-AAAATGAAG-AAACA-TGCATGCC-GAAACAAT-GCTCACTC-A-ATACCCCCACCCCACCCCCTGC---GCC-TCC---TTTTTAATTGATCTCTT--CATGGTATCCA--
gi|24 : ttt-CTTGATGA-T-ATT---------TATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCAAAAA--AAT-T-ATAGGGT-AG-TCGAGCT-CGTT--------------------TG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCATCTGTTTTCT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTC
gi|26 : TCCAAT-TTTCAAATCGCCACGTATTGCACG-GTGTCC-TAGTTTTCA-------------------C-CTCTAGAAAAAGGT-GCATGAACCG-AA--TTTTTAA-GCGCACTAAG-AAAGTGAAT-AAACC-TGCACGCC-GAAACAAT-GTTCACTC-
gi|27 : CGTAGGT-C-GCGGGTATA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----CAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCG-TTTTTTAGT
gi|28 : --TA--CA--TTTGCGA----------TA------------ATG-A--TCGC-AG-T-AA-C-AAT---AGACAA-TATAATA----T----AA--TAGTAAA--TAAT-TAT-TTCGT-T-CT-TG-AATC-CCAT--CAAGGTTA----CAT-GTAT----TAGTCATGT---AC--ATA
gi|3 : cgtgtaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCCC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTTGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ATG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTCGATCAGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AC-AAAGATG-T--TAAT-G-T-TT--GA-T-------AAAAAC-----------T-GTCAC--AGCAGCAGTTTTTT-AAATG-A-CGTTA-A-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCATTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-TA----GCGTTATTAACGCCCTGCAT---TAAAATGAAATTCGAATACTCATTAAAAACCC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCAC-AG-T-AA-C-AAT---AGATAA-TATGATACTTGT-ATAAAGGAATTAAAAATAAT-TT--ATAAT-A-TT-TG-AATC-CCAT--CAAAAT-A----TAT-GTTT----TAAAGAT-T---AC--ATAG-TCC----------A---GTCATGTATCTATAT---TCATTAACCA-AAA-GA---------ACGAGT-TTTTT------CTATT--TTGACG---CAT-----------------CCTCTTCC-AA-AA-TCA--------AAAACG---TTTTTAACAACAACGCAGTTCAA--A-AAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT--GT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAATACTTGTTG---CGTTATAG-AG-TCTTAA-A-GT----ACA---CATGAGCAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACTCGGAACCAAACGCTACG-TGAAC-TTCCATGTCA-ATAAAAAAAAAAAAA----CTGT-GTTAATAA-A-GTT-ATCGC-A-TCCG-ATG-TTTT--ACAAATTCGTA-TTTTTTTTATACAT-GTAATTCAGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-TAAATGCGTTCAACGCA-ATCTTATATTT--AAA-ATCCAC-GATTC-TTT---CA-ACACATAAAAACTATCTAAAGTAC-TTGTAATGAT-GAGTGGGGG-AAAGAAATTAGTTTTA-TT-TGCTGAGTTATTCTC--------GTCCAAT-GTTCAAATTGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTACGTTC-CTCTAGAAAAAG-C-GCATGAAACAC-A--TTTTTAA-GCGCACTGAG-AAAAGGAAG-AAACG-TGCATACC-GAAACAAT-GTTCACTC-ATATACCCCC-CCCC-TCC----CTTGGCC-T-TCTTTTTTTAATTGATCTCTT--AATGGTATCCA--TTTTC--CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTATAATTATG-----AA--AAGAAA-GAAAGAAATATTTGTACA-ACAC---CACTGTTTCCTCAGTATTTGTGTCTGTATTCAAAATACATAT-AA--AAGC----TATCACTTCATTtacatgt
gi|30 : AAAAA-A-GTT-GCCAA-A-TCCG-ATG-TTTT--ACAAATTTGTATTTTTTTTTATACAT-GTAATTCGGCA-A
gi|31 : T--GTAGATTT-A-----C-T---CGCC--GCTATA--CA--TGT---AAAATATACCGTAT-----------ATG-A--TCGC-A
gi|32 : TTT--GC-TGTTTT--GT-CTAAT-TT-TC-ATAAT---T-T-CGAT-CA-AGTTCCTAAT-
gi|33 : ACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-
gi|34 : TAGGT-C-GCGGGTTTA-CAG-ACCTTCTC--GAAAA-CCCTCC-T
gi|35 : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--
gi|5 : tttaCGTAGGT-CCGCGGGTTTAACGG-ACTTTC-----GAAACCCCTC--TG-AAATATT-GACA-GAGGG---TA--CTTGACAATG-TATAATATACTACTGT-GTTAAAA-TTTATTATTTCGA--AA-CAGGCACCGCTTTTTTAGTAATTCACGTCATA--AAACAT--AC-------ATTGTTTTAAC-G----CA-G-C---------GAG-ACTGTTTCC--------------TTGA--ATTTATAT-G-TAAATAGTAAG-----GTG-ACTGACT-T-T--TACT--GTTG-ATA-TTC----AGCTTAAAA-TG---G-ACAGAGAATTGGTT--GCT--GT---TCTTACTTGATGA-T-ATG---------CATAT------AAAAA---CA-AAA----CAACAAAACAAT-TT-GGAAACT-A-TT-GCA--TGC-AAAA--AAT-T-ATGGGGT--G-TCGAGCT--GTTTTT---ATGAA-ATTAAAGATG-T--CAAAAG-T-TTTGGA-T-------AAAAAC-----------C-GTCCT--AGCAGCTGTTTTTT-CAATG-G-AGTTA-T-AAA--ATT-CTCGACCGTCACTGA-CGA---TATTCAT--ACTCT-----GC--TTTCTTC----AA--AAACAC---ACAC-CATGAAG-GTTATTAACGCCCTG--T---TAAAAGGAAATCTTGATACTCATTAAAAAA-C-CCA-CATTCAATATA-TCATT---A--AAATATCAAGGAAATATATT-GT-GAAATTTC--GTCGA---T--GT-GATT--A-----C-T---CGCC--GC--TA--TACTTGT---A----------CAT-----------TTGTA--TAGT-AG-TTCG-C-AGT---A-AT---TATAATA----G-ATGAA----TTAAA--TAATGTTT-ATAAT-T-TC-TG----T-CCAT--CAAATTTA----TTT-GTTTA---TAAAATT-T---AC--AAAG-TCT----------A---GTCATG-GTCTA-AT---TT---AACCA-AAAAGA---------GAGAGT-TGGTTTTTTTTCTA-T--TTGACGATACATTTA-G-AAGATCCA---CCTC-TCC-AATAA-TTACCGGTAATAAAACTCTTTTTTTAA-AACAA-GCAGATCAA--ATTAT---TAA-TAATA--TTT---AGCTTGG-AATGCAA-GATTCAC-TGAAACTATTAT--GCATGTTTT-TGTGCT-AT-TT-TT-ACAAT---TAT-CGA--C-CATTTCCTAAT-CCTGGTG---CGTTATAGCAGCTCTTAG-A-GTAAGGACA----ATGGGTAGT--CCATTCCACGG--CATT-CA-TGTTGG-AACT--AGACCA
gi|6 : TC-ATAAT-T-TT-T---ATC-CC--------CTTA----TTTTATTTCGGATATATAT-TTAAAC--TTAT-TCT----------ATCTGACATGTATATATG---------AATCATAAGATAG--------AGGAGT-ATTTTTTCTTTCTATT--TAGACGATATATTTAAA-AAGA--CAAACCCTCTTCCCAA-AACTCAC---TA--AAA-CGC--TTTTTATAAAAAACGC---TTAATCA-CAT---CATGTAATC---------GCTTGGCAATGC-ACGAATCACTTGATAA--TTCTTCGC-TGTTTTGTCT-CTACTGTT-TCTACAAT---T-TTCGAGCCACGTTTCCTAAT-CCTGCTGGTTCATTATAG-AG-TCTTAGCACGT----ACA--CGAAGAGTAGTAGCCA-TCCACGGAACATTTCACTATTGTAA-CT--G-ACCAAACGCTACGGTTAAC-CTTCTTGTCATATAAACGAAAAGGAA----G-GTCGGTAAGAATATGTT-ACTGA-AATCCGTATG-TTT---ACAAAT-CGTG-TTTCTT--ATACTTTGTAATTCGGCACATCTGACACTGCATGAC-TTACCTAAATTCTTAACTGAAT-G-CAAATGAGTTCAACTCATAAC--ATATTTCCAAA-ATCCAC-GATT--TCTAGTCA-ACA-ATAAAAGCCATTTAAAGTAA-T-AAAACA-T-GACTGGGGATAAAGAAATTAGTTTTA-TTGTACTGGGTGATTCTCTT----TTGTCCAATGTTTCAAATCGTCACGTATTGCACG--GGTCCTTAGTTTT
gi|7 : TAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-----------------A-CAG-CACCGTTTTTT-AGTAATT-ACGTTGTA--AA-CAT--ACATGTACCATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TTTTGTTGTATA-TTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-ACA----CAA--A----------------T-A-TT-G-A--TGCAAAAA--AGT-T----GGGT-AG-TCGAGTT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA---T-TT--GA-T-------AAAAAC-----------CGGTCACA-AACAGCATTTTTTT-TAATG-A-CGTTA-T-GAAT-ATT-CGCGAC-GTTAT------------TTCGTTTAC-TTTCAT-GCT-TTTTCTCAAAAAA--CATCACAA-AGAA-CA----GCGTTATTAACGCCGTGCATTAATAAAAGGAAATTCGAATATTC-CTAAAAAAAtca
gi|7 : AAAAAAAC-AAAACAT-CAATTTA-TTATTGATA--AAACATCAAGGAAA-ATGTTAGTTGAAATTTC--GCCGC---T--ATACATGT-A-----CAT---TATC-------A--CA--------------------GT-----------ATG-A--TCGC-AT-T-AA-C-AAT---GGATAA-Taaaaaaaaaaaaacaacaaacaacaacaaaaaaacaaaacatcaatttattattgataaaacatcaaggaaaatgttagttgaaatttcgccgctatacatgtacattatcacagtatgatcgcattaacaatggataattataatataat
gi|8 : taggtcgcgggtttacggaccttctcgaaaacccctcctaaaaattttacagaggtatcttgacaatgtatatactactgtgtaaaaaacagcaccgttttttagtaattacgttgtaaacatacatgtaccattgttttaacagcagcgagactgttttccgttgaattatatagaaaataacggtaactgacttttttttgttgtatattcagcttaaaatggagagaatttggtgctgttcttcttgatgatattcatatcaaaacgacacaaatattgatgcaaaaaagttgggtagtcgagttcgtttttatgaaataaagatgtcaaatttgataaaaaccggtcacaaacagcattttttttaatgacgttatgaatattcgcgacgttatttcgtttactttcatgctttttctcaaaaaacatcacaaagaacagcgttattaacgccgtgcattaataaaaggaaattcgaatattcctaaaaaaaaaaaaaaaaaaaacaacaaacaacaacT---AAATGA-TATAATA------GTAAA-----TAAA--TACT-TTG-GTAAT-A-TT-TG---TC-GCAT--CAAATTTA----TTT-GTTT----TAAAGAT-T---GC--ATAA-TCT----------A---GTCATGTATCTCTAT---TC-T-AACCA-AATATA----------CGAAT-TTTTTTTTTTATTATTATTTGACGATACATT---T-AG------------------AA-GA-TCAT---TAT-AAAACGC--CTTT-AACAACAACGCAGTTCAA--A--AT---TAT-TAATAATTTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT--GT-CTAAT-TC-TT-ACAATATGT-T-CGA--CCAAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACACGACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAA-CT--GGACCAAACGCTACG-TGAAT-CTTCATGTCA-ATAAAAGGAAAACAA-----TGT-GATAATAA-A-GTT-ACCGC-A-CCCG-ATG-TTTT--ACAAATTCGCA-TTT--TTGATACAA-GTAATTCGGCA-AT-TCA-ACTG----AC-TTACTTAAATTTTAAACTGAAT-G-CAAATGTGTTCAATGCA-tataatataat
gi|9 : actaaacatttttttttttttaattaagaaatcataagaatttttcggtcgtcaattcatagattttttgttaagccatgcagtttagagattatGTAGGTGC-GCGGGTTTA--GG-ACCTTCTC--GAAACCCCGTCCCTA-AAAATTT-GACATGGGG----TAT-CTTGACAATG-TATA---TACTACTGTTGTAAAA--TT-ATT-TTTCGATAAAACAG-CAGCCTTTTTTTAGTTATT-AC-TTGTAGAAA-CAT--AC-------ATTGTTTTAACAG----CA-G-CAGTACCATTGAGGACTGTGTTTCGCGAGTGTGTGGGTGGAGGATT-ATATAG-AAAATA--ACGTGTGTGTA-ACTGACTGTGT--T-TT--GTTGTATA-TTC----AGCTTAAAAGTG---GGA--GTGAATTTGGT--GCT--GT---G-TT-CTTTATGACT-ATT---------CATATT-----CAAAA---CG-AAA----ACA--AAACAAT-TTTGAAAAAT-A-TT-G-A--TCCGAAAAACAATGT-ATTGGG--AGTTCGAGCT-CGTTTTT---ATGAATAT-AAAGATG-T--CAAA-GTT-TT--GA-TAA-----AAAAAC-----------T-CTCGCTGAGCAGCAG-TTTTT-AAATG-ATCGTTATT-GAAT-ATT-CGC
blockSeqs : G C A . AT T C T T T G . A ATA T A T A A G T A T GA A . ATGTACC TGCT . A AGTACCATT G CGAGTGTGTGGG GG TA . GT TGTGT C G G TC G TT G GATC G GTC G CA . AG GTA A C . AGCGTCAGG GCGCGA GAC T CGAC CA G T A C T . C AT A AC G A . T C . T TT . TC A T G TG C AAAAAAA CAAAAAAAACAC TG T . . T T . . G C T A CC G . C AAAA . CAT A TGAA TAA A AC A T T . AG T A . A . . AGTAA A GAA TATA . TGTATATAAATGGTAATA TA . C T . G TTC T CTTGTATAAAGGA AA G T GT . AATCG TC A AAAG T CGGA G TTAA GA T TTTTTTCTGAA TATATTCT T A CCAAAAAAGAC A TC T AT T G TAGAAGATCCACCTCTCCAATAATTACCGGTAAT ACTCTT T C C AGT TCAC . G ATTTT C A C TA TC A GT G G . T ATG A T GCCAC G A GTT C CT C C AAGG CGA A AG T AA T AC ACTCG A C G G G T AAATGG C T T T . G A T . TA TTC T CT T T C CT C CATGA . . G T TCTT C C . C AGT . C A C G ACATGTAATGTA G T T T . G C G TCGAGTTC G C T T ATCAAAA CGTT T GCG GCACT G A TG . A . A A T A A CTTGGCCTTCTTT A CC AT . TA A T . T AAGA G . GCT T C A G A A AT CCCAT
blockSeqs : . . . . . A . . . . . . . . . T . . . . C C T . . . C TCA . . CTATG . . . T . . . . . . . A . A . . . . . . . . . . . . T . . . . . . A . . . . . C . . . . . . . . T . . . . . . . AA CT A T . . . . . . . . T A CG A . C . . AA . . TAA T AC . . T . . . T . A . . . . . GCTA . TGTAAAATATACCGTAT A . . . . . . . TAATAGTA T . T A . AATC . A . . A G GT . . ATCT TTCATT . A GAG . TT T . T A TAAAAAGACAAACCCTCTTCCCAAAACTCACTA ACGC T A C AGA ATT . . TTT . . . . . . T . . . . . . . CAC G . . . T . . . C G . . A . A ACT G C . T . . CT . G . . . . . . . . TTT . TT T . . T . A . . . . AT C A . C . . C A T A ACTTGTAATGAT G . A T . . C G TTTT . C G . ATGAAA C . GT CAA . . G . . . T . . . . CCTGCGCCTCCT A . AT . . . T . . AA . . . . . A . A . . T
blockSeqs : . . . . . A . . . . . . . . . A . . . . T . T . . . C . . . . . . . A . . . . . . . . . A . . . . . . . . . . . . . . . . . . . A . . . . . A . . . . . . . . T . . . . . . . . CG . T . . . . . . . . T A CG A . C . . . . . . T AA . . T . . . T . A . . . . . GCA . TTTGCGATA A . . . . . . . TAAAAGTA . . T A . AATC . A . . . C T . . A TTTTT . A AG . TT T . T A CCTCTTCCAAAATCA ACG T C C AGT AA . . TTT . . . . . . . . . . . . . . TCA T . . . T . . . . A . . A . A CT G C . G . . G . A . . . . . . . . TTC . TT G . . T . A . . . . AC . A . . . . . . . A AATAAAACAT . . A . . . . G . . T T . TGAA C . C AA . . T . . . T . . . . CTCTTC A . T .
blockSeqs : . . . . . A . . . . . . . . . A . . . . T . C . . . C . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . A . . . . . . . . A . . . . . . . . A . A . . . . . . . . T A CG A . T . . . . . . T CC . . A . . . T . A . . . . . GC . CTTGTACAT G . . . . . . . GATGAA . . T T . AATC . G . . . G T . . A TTCT . A AC . TT . . A A TAGAAGATCATTAT CGC . . . . A . . . . . . . . . . . . . . . . . CCA T . . . T . . . . G . . . . A CT . . . T . . . . . . . . . . TC . CT . . . . . . . . . . . . . . . . . C CA . . G . . . T .
blockSeqs : . . . . . A . . . . . . . . . A . . . . . . T . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . G . . . . . . . . T . . . . . . . . C . T . . . . . . . . T . . A . . . . . . . . T AC . . T . . . T . A . . . . . GC . CATGTAT T . . . . . . . GTAAG . . T A . AAT . A . . . A G . . A TTT . A GA . TA . . T . . . . . . . . . . . CC G . . . . . . . . . A . . . . .
blockSeqs : . . . . . A . . . . . . . . . A . . . . . . T . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . A . . . . . . . . C . . . . . . . . C . A . . . . . . . . . . . G . . . . . . . . T C . . . . . . A . . . . . . . GC . TGTATAT A . . . . . . . GTAAA . . C T . ATC . T . . . T T . . A . . . C . .
blockSeqs : . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . G . . . . . . . . T . . . . . . . . T . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . TATAT A . . . . . . . TAAT . . G T . TC . C . . . G T . . A
blockSeqs : . . . . . C . . . . . . . . . . . . . . . . . . T . . . . . . . . C . . . . . . . . . . . . . . . . AT A . . . . . . . . A . T . T . . . . T .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . GT A . .
blockSeqs : . . . .
blockSeqCons : **** A* ** ** A* ** ** *** T* ** C* ** AC* ** ** ** TGTATAT************************** A*** GTAAA********* T* N** AATC** T**** A************* TTCT***** TT TAGAAGACCTCTTCCAAAATCA******************** ACGC** AGT AC*** *** TTT***** ** CCA** T* C** A* TTC CT T* TGAA*** C*** GC* CA***
originalCons : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CA--TGT---A----------TAT-----------ATG-A--TCGC-AG-T-AA-C-AAT---AGATAA-TATAATA----T-ATAAA--AATTAAA--TAAT-TTT-ATAAT-A-TT-TG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATCTATAT---TT-TTAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATT---A-AAGATCCA---CCTCTTCC-AA-AA-TCAC---TA--AAAACGC--TTTTTAACAACAACGCAGTTCAA--A-TAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT-TGT-CTAAT-TT-TC-ACAAT---T-T-CGA--CACAGTTCCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GT----ACA--ACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TCT---CA-ACACATAAAAGCTATCTAAAGTAC-T-GTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTCG---TCGTCCAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT-GAAAGCGTGC---C-CTCTAGAAAAAGGC-GCATGAACCGCNA--TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GCC-T-C---TTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
finalCons : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATTA-TATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGGT--GCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TT-G-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCAC--AGCAGCTGTTTTTT-AAATG-A-CGTTA-T-AAAT-ATT-CGCGAC-GTCATTGAACGACGTTATTCGTTTACTTTTCAT-GCC-TTTCTTC----AA--CATCAC---AGAA-CA----GCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCATTAAAAAAAC-CCA-CAT-CAATTTA-TTATTTATA--AAATATCAAGGAAA-ATGTTTGTTGAAATTTC--GTCGAAAGT--GTAGATTT-A-----C-T---CGCC--GC--TA--CATGTATAT--------------------------ATGA---TCGC-AG-T-AA-C-AAT---AGATAA-TATAATAGTAAA---------ATTAAA--TAAT-TTT-ATAATN--TT-TGAATC--CCAT--CAAANTTA----TTT-GTTT----TAAAGATT----AC--ATAG-TCTA-------------GTCATGTATCTATATTCT-----AACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTATT--TTGACGATACATTTAGAAGACCTCTTCCAAAATCA--------------------AAAACGC--TTTTTAACAACAACGCAGTTCAAAC---AT---TAT-TAATATTT-----AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TGTTTT--GT-CTAAT-TT-TC-ACAAT---T-T-CGACCA--AGTTCCTAAT-CCTGTTG---CGTTATAG-AGT-CTTAG-A-GT----ACAC--CATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TCT---CA-ACACATAAAAGCTATCTAAAGTAC-T-GTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTCG---TCGTCCAAT-TTTCAAATCGCCACGTATTGCACGT-GGTCC-TAGTTTTCAAAATGAA---GCGTGC---C-CTCTAGAAAAAGGC-GCATGAACCGCA---TTTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GCC-T-C---TTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): AAGTTTCTTCATCATTTTCGCATTTTCGAATGTTAAAAAAATGTGCATGCATACAAAAGACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGGGCAGGGTGAATGTGACCGAAAACTCTTGTGACTAGCGAAGATGAAAAAGACGGAATAAACAAGTGATTCATACACATCCGAAAAATATTAAGATCAATTTTTAACATTATATTTTTGCCAGTATCGACTTTGAATCGGTTTGCTCATTTTTCAAAATCAAATGGCCTTTTTCCCCAATGAATTATTTGCACAGGTGCGCCATAATGCAATATACCGACAGTGGTGAAATCCGGGTGAACATTGTGTAATGTCACTATAACAATAGATTTTTGCCTAGTATGGTAAAGGAAGAACGAAAGAACGTGTTTGGCGATTTCTAATGCAAGTTTTAAAATATTATCAACGTAGAAAAGAAGATAAGTTTGTCTATCCCAAGATAAGAAATGATAAAACATGTATAAGGTAACGAAACTGTTTGTGTCATTGTATCATGCCTCTAGTGTCCGTTTCTGTAACCTTGTCTGTATTTATGGCAAATACAGATAATACTGTACCAATGCATATCATAGTGCATAATAAACATTGTGATTTTACAATTAAAGCATGTGACGAGTTTAGTTTTCTCGTTTATTATTAAATTTATTGTTTGTGATCAAAAATGAAAACCATACTGTGCATAATATATTAAAGTGTATTTTATCCGTCTCTCTTTGTCTGAAAATTTTAAAGAGTGTTCTGCTAATACGCGTCAAATTTCCTGAATAAAACCTTTAAAGTGCCCCACATGGTCTCCCCTTTCTAACTTTTCTCCGTAAAAGATTGCACCCAGCTTCATATTTTTCCCGAAAACTGTCGCTGTTATTACTTTATCATATAAATTCATCTGCCTTGCGTCGAAATGAAAGGATAGACTTTACGATAGTAAACGAAAACATTGATACTATCTAAAGCATGATTAAAGCAATTTGTTGTT
Unaligned ( gi|11 ): CCATTTGGTCCTGAAGAAATTTTAGAGTGTCCGCTACATACGCGTCAAACTTTCTGAATAAAACTTAAAAGTGCATGGATCTCCTGCCTAAATTTTCTGCTAAAGTTGTCAGCCTGTCTTCGCTTTCCCCCAAAATTGTCCGCTTTTAGACTTCATAAAATTAAAGGGACTGGAAACGCGTTATCTCAAAAGTTTTGCATCGGAAAACGAAAGGCGAAGACTTACAAACTTAAATGAAACCTGATATCACCTTCAATATGGTAAAAGCAGCTGTTGTTAATAGTTCATAATTGAGTATCATCGGTAATTTTAATTTTTACGCCTCCTTTCTATCAACGCAATTGACGTCACAATGAAATGTACACACGAACCAAAAGATTCGACGCGTTAGATTTTGCGTTACCCCAAAATCGCTGACGTAGGCAAACCCGCGACCTACGTTATAAATCATAAAGTCGCAA
Unaligned ( gi|15 ): TCTAAAGTGCTATGAGTCTCCTGGCCTAATTTTCTGTAAAGTTTGGGTGGACATGTCAGAATAAAAGGGATGAAACGTGAACTATCTCAAGTTTTGCATTGGAAACGAAAGGAAGACATTCGAAATGAAACGAAACCTTAATATACCTCAGTATGTTAAAGCAGCTGTAGTTAATACTCATAATTAATATCGGTAATTTTTTACGCTCTTTATCATCAGTCAATACTATCAACGCAATCGTTACGTCACCATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGAAATGCGTACCCCAAAACCGTGACGTAGGCAAACCCGCGACCTACGTTA
Unaligned ( gi|16 ): TTTGCATCGGAACTGAGTCCCAAGGAAGACTTAATCGAGAAATAAGAGCGAGAACCTTGATTATACCCTCTTTGGTGTAATGCTGGTTTTAGGAGGCCTAAACAGGCAGCCTATTTGTTAATATCTAAAGTGCATATCGGTAAAGTTTTTACGCTCTCTATCATCAGTCAATCTATCAAAGAATTGCTTACGTCACAATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGGATTTTGCGCCCGGTACCCACAAAACTGCCGCTGTTACGTAGCCGAAAAACGCTGCGACC
Unaligned ( gi|17 ): TAATGAAAAAGAAAAAAAGTACAGAAATATTTGTAAAACATTCTGGAAAATTCTTTCCATGGCCATGTAGTAATATGATATGTTTGTATTCAAAATATAGACATGTATATAAAGCTACTAAATTAGATCACAATCTTACCCGCTTCAATGGTATTGACTATGGGTTAATATTTCAGTTTCCCCGGAACCTTCTCACAGTAATAAGGCAAACGATTTAAGTATCAATTAATAATCTTATTATATTCTTTTTACATCACTTTCCACCCAT
Unaligned ( gi|20 ): CCTCTGTAAGAATTGATATTATAACAGGATGGAATGCTTACCTCGAATTTTGCATCGGAAACGGAAGAAAAGACTCTTAGAAAATTAAACGAAGCATGATATATTTCAATATGATGAGATAATTTAAATTTAAACGCTTATAAATCTATTCACTACGCTAATTGTTACATGACCTACTCACAATGAAATGTGCACGAAAAAAGACCAATCGTAA
Unaligned ( gi|21 ): CAAATATTTTCCCATCGGAATCGAAAGGAAGCAAAATTAAATGAAACATATTCATATCGGTAAAAAATTGAAATCTTTATTATCTATGCACAACATAAAGGCAATTGTTACGTCACAATTGAAAGTACACAGAAAAAGACGTCGAGTCGTAAGATTTGCGTACCCCAAAGCCGTGACGTAGGCAAACCCGCGACCTACGTTAAACTATAAAT
Unaligned ( gi|25 ): TATTGCGTTAACGTAATTTCAACCAAAAATGACATTTTGACAACTCATTTTACCACATCAGAAATGAATGAAAGGATAAATGATAGGGGCTGGGATCATGCTCCATGTCTCTAGTGCATGTGATCTGTACCCTTGTTTGTATATGAA
Unaligned ( gi|29 ): CGAACTAAATTTTTTTTTATTAAGAAATCATAAAAAAATTTCGTCCAATCATAATTGTTGTTAAGCCATCAGTTGAAAGATTATTAAATGATAGTGAAATAAAA
Alignments
lowQualScore : 1 1111 1 1 2222222 2222 333333333 222222222222 11 11 11111 1 1 1111 111 111 222222222 111111 1111 1 1111111 2222222222222 11 1111 111 1111 111 11111 222222 4444444444444444444444444444444444 111111 3333333333333333 11 111 1111 2222222222 1111 111 11 2222222222 1111 222 77777777777777777777777777777777777777 2222 1 22222 111 22222222 11 1 111 111 1 11 2222 11 1 11 1 333333 111 11111 2222 11 1 11 111 1 4444444444444 1 1 1 33333 11 2 1111 1111 1111 1 1 1 44444444444444444 11 222 1 1 1 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 22 1 222 1 33 33333
lowQualScore : 4 4 4 4 55 2 4 5 0 5 5555 5 5 888 5 0 55 5 5 0 5 5 1 0 1 1 77 5 77 0000000 2222 5 5 777777777 5 999999999999 55 77 5 33 44444 5 5 5 77 1 77 4 2222 5 000 5 77 77 77 000 5 5 5 000000000 999999 888 5 0000 66 4 4 1 4 8 4 55 3 55 3 3 0 3 3 4 777 4 66 4 55 4 4 4 55 4 8888888 2222222222222 4 00 5 4 4 4 8 4 4 5 0 1 11 1 5 555 7777 555 5 0000 777 88 5 5 3 5 66 5 66 3 66 4 11111 4 777 000000 5555555555555555555555555555555555 6666 4 8 4 4 777 111111 4 7777777777777777 3 5 5 11 111 999999 66 2 9999 4 3333 99999999 66 5 6666666666 888 2222 5 000 44 8888888888 1 5555 444 1 11111111111111111111111111111111111111 1111 5 3 5 1 11111 444 8 22222222 8 8 8 0 11 99 6 3 6 99 6 6 6 111 6 6 6 3 6 6 444 6 88 8 8 11 4444 1 11 8 88 8 88 0 0 11 3 2 0 2 8 8 777777 8 8 6 6 6 6 6 6 6 99 555 6 7 6 6 88 8 77777 8 8 8 8 3333 2 11 0 22 777 0 8 9 6 1 2222222222222 2 0 1 3 0 0 2 2 0 3 00000 8 0 3 33 8 4 0 7777 9999 8 3 8 0 8 8888 8 8 88 8 8 8 1 8 0 0 0 77777777777777777 3 3 33 66 111 3 7 7 3 3 77777777777777777777777777777777777777777777777777777777777777777777777777777 333333333 00 3 555 0 3 6 7 6 7 7 11 55555
lowQualScore : . . . . .. . . . . . .... . . ... . . .. . . . . . . . . . .. . .. ....... .... . . ......... . ............ .. .. . .. ..... . . . .. . .. . .... . ... . .. .. .. ... . . . ......... ...... ... . .... .. . . . . . . .. . .. . . . . . . ... . .. . .. . . . .. . ....... ............. . .. . . . . . . . . . . .. . . ... .... ... . .... ... .. . . . . .. . .. . .. . ..... . ... ...... .................................. .... . . . . ... ...... . ................ . . . .. ... ...... .. . .... . .... ........ .. . .......... ... .... . ... .. .......... . .... ... . ...................................... .... . . . . ..... ... . ........ . . . . .. .. . . . .. . . . ... . . . . . . ... . .. . . .. .... . .. . .. . .. . . .. . . . . . . ...... . . . . . . . . . .. ... . . . . .. . ..... . . . . .... . .. . .. ... . . . . . ............. . . . . . . . . . . ..... . . . .. . . . .... .... . . . . . .... . . .. . . . . . . . . ................. . . .. .. ... . . . . . ............................................................................. ......... .. . ... . . . . . . . .. .....
lowQualScore : 0 0 0 0 55 0 4 0 0 0 6666 0 0 888 0 4 44 0 0 1 0 0 2 1 4 4 99 7 99 7777777 1111 7 7 111111111 7 333333333333 77 44 7 66 33333 7 7 7 99 4 99 1 1111 7 000 7 99 99 99 000 0 0 0 000000000 444444 888 0 6666 99 0 0 3 0 0 0 55 9 55 6 6 5 6 6 0 000 0 44 0 55 0 0 0 55 0 5555555 7777777777777 4 66 1 4 4 4 9 4 4 0 1 4 44 4 7 999 5555 666 0 6666 555 66 0 0 4 0 99 0 11 2 11 4 11111 4 888 666666 5555555555555555555555555555555555 1111 0 9 4 4 000 555555 4 9999999999999999 2 0 0 99 666 000000 11 6 4444 4 9999 11111111 11 0 9999999999 888 1111 7 999 11 7777777777 0 7777 777 7 88888888888888888888888888888888888888 6666 0 2 6 0 44444 000 0 22222222 0 0 0 8 00 22 7 3 7 22 7 7 7 777 7 7 7 2 7 7 000 0 88 0 0 00 0000 4 00 0 88 0 88 6 8 00 2 5 0 5 0 0 666666 0 8 7 7 7 7 7 7 7 22 555 7 2 7 7 88 0 88888 0 0 0 0 8888 5 00 0 55 555 0 8 8 5 2 0000000000000 5 0 0 2 0 0 5 5 2 2 55555 0 8 2 66 0 0 8 2222 0000 0 2 0 8 0 2222 0 0 66 0 0 0 0 0 0 0 0 55555555555555555 2 2 88 55 111 3 3 3 3 3 00000000000000000000000000000000000000000000000000000000000000000000000000000 777777777 00 3 000 7 3 7 3 7 3 3 77 77777
consensus : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGG--TGCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TTG-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCA-C--AGCAGCTG-TTTTTTAAAT-GA-CGTTA-TAAA-TATT-CGCGA-CGTCATTGAACGACGTTATTCGTTTACTTTTCA-TGCC-TTTCTTC----AACATCAC---AGAA-C----AGCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCAT-TAAAAAAACCCA-CA-TCAATTT-ATTATTTATA--AAATATCAAGGAAAATGT-TTGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---CGCC--GC--TACA--TGT---A----------TA-T-----------ATG-A--TCGC-AG-T-AAC-AAT---AG------ATAAT-ATAATA---GTA-----A----AATTAAA-TAA-T--TTTATAAT--NTTTG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATC----TAT-ATTC--TAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTAT--TTTGACGATACATTTAGAA-GATCCAC-----CTCTTCC-AA-AA-TTAC-------AAAACGC--TTTTTAACAACAACGCAGTTCAA--A-TAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TG-TTTTGT-CT--AAT-TT-TC-ACAAT---T-T-CGA-CCAAGTT-CCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GTA--CA-C--CATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TCT---CA-ACACATAAAAGCTATCTAAAGTAC-TGTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTCG---TCGTCCAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT--G-AAGCGTGC---C-CTCTAGAAAAAGGC-GCATGAACC-GCA--T-TTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GC---C-T-CTTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
Reference ( family-200 ) : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTCGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGG--TGCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TTG-A--TGCGAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCA-C--AGCAGCTG-TTTTTTAAAT-GA-CGTTA-TAAA-TATT-CGCGA-CGTCATTGAACGACGTTATTCGTTTACTTTTCA-TGCC-TTTCTTC----AACATCAC---AGAA-C----AGCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCAT-TAAAAAAACCCA-CA-TCAATTT-ATTATTTATA--AAATATCAAGGAAAATGT-TTGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---CGCC--GC--TACA--TGT---A----------TA-T-----------ATG-A--TCGC-AG-T-AAC-AAT---AG------ATAAT-ATAATA---GTA-----A----AATTAAA-TAA-T--TTTATAAT--NTTTG-AATC-CCAT--CAAANTTA----TTT-GTTT----TAAAGAT-T---AC--ATAG-TCT----------A---GTCATGTATC----TAT-ATTC--TAACCA-AAAAGA---------ANGAGT-TTTTTTTTTTTCTAT--TTTGACGATACATTTAGAA-G----AC-----CTCTTCC-AA-AA-TCA--------AAAACGC--TTTTTAACAACAACGCAGTTCAA--A-CAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TG-TTTTGT-CT--AAT-TT-TC-ACAAT---T-T-CGA-CCAAGTT-CCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GTA--CA-C--CATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACT--GGACCAAACGCTACG-TGAAC-CTTCATGTCA-ATAAAAGAAAAAAAA----GTGT-GNTAATAA-A-GTT-ACCGC-A-TCCG-ATG-TTTT--ACAAATTCGTG-TTTCTTTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-CAAATGCGTTCAACGCA-AAC--ATATTTCCAAA-NTCCAC-GATTC-TCT---CA-ACACATAAAAGCTATCTAAAGTAC-TGTAACG-T-GAGTGGGGG-AAAGANATTAGTTTTA-TT-TACTGAGTGATTCTCTCG---TCGTCCAAT-TTTCAAATCGCCACGTATTGCACG-TGGTCC-TAGTTTTC-AAAAT--G-AAGCGTGC---C-CTCTAGAAAAAGGC-GCATGAACC-GCA--T-TTTTAA-GCGCACTGAG-AAAGTGAAT-AAACG-TGCACGCC-GAAACAAT-GTTCACTC-A-ACACCCCC-CCCC-CCC----C---GC---C-T-CTTTTTAATTGATCTCTT--CATGGTATCCA--TTTTTT-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTAAAATTATG-----AA--AAGAAA-GAAAGAAAAATTTGTAAA-ACACG--CGCTG-TTCCTCTGTATATGTGTCTGTATTCAAAATACATATAAA--AAGC----TATCACTTCATT
gi|1 : ACGTAGGG-C-GCGGGTTTA-CGGGACCTTCTC--GAAA-CCCCTCC-CG-AAAATTTTGACA-GAGGAGATTATTCTTGACAATG-TATA---TACTACGGT-TTAAAAAATT-ATT-TTTCGATAA--CAG-CACCGTTTTT--AGTAAT--ACGTCGTA--AA-CATTTAC------CATTGCTTTAATAG----CACG-C---------GAT-ACTGTATGCCG------------TTGATTATT--TATAGGAAAATAT-ACG-----GTG-ACTGACT-T-T--T-TC--TTGGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATGTGGTTTGCT--GT---TCTT-CTTGATGA-TGATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-T---GAAAAT-ATTTG-A--TGC-AAAA--AAT-T-ATGGGGTCAG-TC-AGCT-CGTTTTTTGAGTGAA-A--AAAGATGCT--CAAT-G-T-TT--GA-T-------AAAAAC-----------C-GTCACC--AGTAGCTGTTTTTTTAAATGGA-CGTAATTAAATTATT-CGCGA-CGTCA-TGAACGACGTGATTCATTTACTTTTCATTGCCGTTTCTTCAA--AACATCAC---AGAA-C----AGCG-TATC-ACGCCCTGCAT---TAAAAGGAAGT--GAATACGCATAAAAAAAAAACCA-CA-TCAATTTAATTAATTATA--AGATATCAAGGAAAATG--TTGTTGAAATTTTCTGTCGAAAGTTGGTAGATTTTA-----C-T---CGCC--GCTATACA--TGT--------------TATT-----------ATG-GATTCGCTAG-TAAAC-AAT---AG------ATAATGGTATTA---TGA-----AT---AATTAAA-TAATT--TTTATAATCATTCTGTAA---CCAT--CA---TTA----TTT-GTTT----TAAAAA--T---AC--ATTG-TCTA---------A---GTCATGTATC----TATAATTC--TAACC--AAAAGA---------CAGAG---GTGTTTTTTTCTA---TTTGACGATACA-TTAGAA-GATCCAC-----CTCTCTC-AA-TT-TTA--------AAAA----------AA-AACAAT---GTTCAA--A-TATAGAGAT-AAGTG--TGTGAGAGGTTGG-AATGC-A-GATTCACTTGAAAC--TTTT--GT-TGTTTTTGT-CT--AAT-TTCTC-ACAAT---T-T-CGA-CCAAG-T-CCTAAT-TCTATTG---CGTTATAGTAG--CTTAG-A-GTA--CAGA--CATGTGTAGT--CCA-TCAACGGA-CATT-C--TGTTGGAAA-T--GGACCAAACGCTA----------TCCATGCCA-ATAAAAGAAAAAAAA-----TGT-GTTAATAA-A-GTTAACCGC-A-TCCG-ATGTTTTT--ACAAA-----G-GTTC-TTTATACAT-GTAATTCGGCA-AT-TGA-ACTG----ACTTTACTTTAATTCTAACCTGAATGG-CAAATGCGTTCAACGCA-A----ATATTTCCAAACTTCCACGGATTCGTCT---CACACAAATTAATGCTATCTTAAGT--------------AGTGGGAG-GAAGATATTAGTTTTATTT-TACT-AATAATTTTCTCA---GCGT-CAAT-TTTC-AATCGCCACGTAGTGCACGTTGGTTC-TAGTTTTCAAAAAT--G-AAGCGTG----C-CTCTAGAAAAAGGC-GC-TGAACC-GCC--CATTTTAA-GCGCA-TGAG-AAAGTGAAT-AAGCGATGCACGCC-GAAACAATAGTGCACTC-A-ACACCCCC-CCCC-CCCG---C---GC---CAT-CTTTTGAATTG----CTC--CATGGTA-CCATTTTTTTT-TTCAATTGCA--TTACTTCGTTAAAATTTGAGCTG-GTTCGAATT
gi|1 : taAAATTATGTAAGAAA--AAGAAAAGAAAGAAAAATTTGTGAATACACG--CACTG-TTCCTCTGT-TATGTGTCTGTATTC-AAATACATATAAAT-AAGC-----ATCACTTCATTatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaaattatgtaagaaaaagaaaagaaagaaaaatttgtgaatacacgcactgttcctctgttatgtgtctgtattcaaatacatataaataagcatcacttcattggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|10 : taacgtagggcgcgggtttacgggaccttctcgaaacccctcccgaaaattttgacagaggagattattcttgacaatgtatatactacggtttaaaaaattatttttcgataacagcaccgtttttagtaatacgtcgtaaacatttaccattgctttaatagcacgcgatactgtatgccgttgattatttataggaaaatatacggtgactgactttttcttggtataattcagcttaaaatggagagaatgtggtttgctgttcttcttgatgatgattcatatcaaaacgaaacaaaaacaattgaaaatatttgatgcaaaaaattatggggtcagtcagctcgttttttgagtgaaaaaagatgctcaatgtttgataaaaaccgtcaccagtagctgtttttttaaatggacgtaattaaattattcgcgacgtcatgaacgacgtgattcatttacttttcattgccgtttcttcaaaacatcacagaacagcgtatcacgccctgcattaaaaggaagtgaatacgcataaaaaaaaaaccacatcaatttaattaattataagatatcaaggaaaatgttgttgaaattttctgtcgaaagttggtagattttactcgccgctatacatgttattatggattcgctagtaaacaatagataatggtattatgaataattaaataatttttataatcattctgtaaccatcattatttgttttaaaaatacattgtctaagtcatgtatctataattctaaccaaaagacagaggtgtttttttctatttgacgatacattagaagatccacctctctcaattttaaaaaaaaacaatgttcaaatatagagataagtgtgtgagaggttggaatgcagattcacttgaaacttttgttgtttttgtctaatttctcacaatttcgaccaagtcctaattctattgcgttatagtagcttagagtacagacatgtgtagtccatcaacggacattctgttggaaatggaccaaacgctatccatgccaataaaagaaaaaaaatgtgttaataaagttaaccgcatccgatgtttttacaaaggttctttatacatgtaattcggcaattgaactgactttactttaattctaacctgaatggcaaatgcgttcaacgcaaatatttccaaacttccacggattcgtctcacacaaattaatgctatcttaagtagtgggaggaagatattagttttattttactaataattttctcagcgtcaattttcaatcgccacgtagtgcacgttggttctagttttcaaaaatgaagcgtgcctctagaaaaaggcgctgaaccgcccattttaagcgcatgagaaagtgaataagcgatgcacgccgaaacaatagtgcactcaacaccccccccccccgcgccatcttttgaattgctccatggtaccattttttttttcaattgcattacttcgttaaaatttgagctggttcgaattatggtgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacAACAAT-TT-GAAAAAT-A-TTA-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------A-GTCA-C--AGCAGC---------A--------GTTA-TGAA-TATT-CGCGA-CGTTATTGAACGACCTTATTCGTTTACTTTTCA-TG----------------CATCAC---AGAA-C----GGCGTTATTAACGCCGTGCATTAATAAAAGGAAATTAGAATATTCAT-AAAAAAAACCCA-CA-TCAA--T-A-TATTTATA--AAATATCATGGAAAATGT-TAGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---CGCC--GC--TATA--CAT---G----------TA-T-----------ATG-A--TCGC-AG-T-AAC-AAT---GGATAATTATAAT-ATAATA---GT-----------AATTAAA-TAA-T--TTTATAAT--ATTTG-AATC-CCAT--CAAAATTA----TTT-GTTT----TAAAGAT-T---GC--ATAG-TCT----------A---GTCATGTATCTATATAT-ATTC--TAACCA-AAAAGACCAAAAAAGACGAGTACTTTATTTTTCCTA---TTTGACGGTACATTTAGAggactatgggttaatatttcaggtttaccaccttcatacatgtttatgcaaacgcacttagcataatatagttttttctgttcatttccctcccatttttggatttaaaagaaatgtgcatgtgttcttcaaactttcatacaaaagaccatcttcgctagcaagggtttcggtctcactttcgtccatacaccattttatgggatcgggataaaggaccggaaactcggactaagcaaaagagagcacggtagttatacacatccagacaaaactttttaacatatattaacaattacatgtaatttgccagtatgactataagaatcgtttgattcattgtcaaaattccaaatgccccccccccccccccccgatggaatcatgcggcacgtgccataataacatatactgtcccagggctctcagttgtgtgaggtgtaattgttgttgctattcgtcactaataacatgatttttactagaatgtaacttcagagaacgagtccaaagaggtaataacgttttggtggttctcaatagttcgtatttttttgcaataaacagaataaacggaacatttgaagaaaaataagttttgtctatcccagatcagaaataaatattaatactattaaagtagacgagttctgggatgacggttcatgtcattgatccatgcccttgacctgtgataccttgtcctctgtacctgttcatatatgagacacgacggacaaccaaaacgtccacatgctaatcatagttagggtctattaggagccaccaccaatgatgagttgtacaaaattaaacatgccctctttctctgttcttatgcaatttatgctggacaaaaattgattaaatcatgttgaacgtagatatatttttaaaaatgttatcttcctttcgtctttggactgaaaaaagttttaagagtagtcgcctaataacg
gi|12 : GTAG-T-C-GCGG-TTT--CGG-AGCTTCTCATGATATACCCTCC-TATAAAATTTTGCCA-GGGG----TAT-CT-GACAATGATATA---T-CTACTGT-GTATAAA-TA-ATT-TTTCGATAAA-TAG-CACCG---TTTTAGTTATTAACGTTGTA--AC-AAT--AC------CATTGTTTT-ACAGTCA-CA-GACCTATG----GAG-ACTGATTT-CA------------TT-A--ATT-TTATAG-AAAATA--ACG-----GTACACTGACT-T-TTCT-TT--TTTGTTTGGTAT----AGCTT-AAA-TGGTCG-A--GA-AATTTGG--TGCTAGGTGTATCTT-CT--ATCA-T--TTAGCGTCAGGCATATGCGCGATAAGAGACCGTAAACGACCAG--AAACCATGCT-AAACAATCA-TTG-GATTGCCAAAA--AAT-TAATGGGGA-TG-CCGAGCTCCGTTTTT---ATGAA-AT-AAGCATG-TTCCAGA-G-TGTT--GACT-------AAAAAC-----------CTGTC
gi|13 : aaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGA----TAT-CTTGACAATA-TATA---TACTACTGT-GT-ACAT-TT-TTT-TTTCGATAAA-CAG-CACCG--TTTTTAGTAATT-ACGTTGTA--AA-CAT--AT------CATTGTATTAACAGTGCTCA-G-C---------AAG-ACTGCTTTCCA------------TTGG--ATT-ATATAG-AAAATA--ACG-----ATA-ATTAATT-T-T--TGTT--GTTGTATAATTC----AGCTTAAAA-TG---G-A--GAGAATTTGC--TGCT--GT---TCTT-CTTGATGA-T-ATC---------TATAT------C-TAA---CA---------AA--AAACAAT-TT-G-AAAAT-ATTTG-A--TGC-AAAA--AAT-T-AT-GGGT-AG-TCGAGCT-CGTTTTT---ATGAA-TA-AAAGATG-T--CAAA-G-T-TT--GA-TAAAAAAAAAAAACCAAAAAAAACAC-GTCA-C--AGCAGCTG-TTTTg
gi|14 : ta----AACATCAC---AAAAAC----AACGTTACCAACGCCCTGCAT---TGAAGGAAAATTCGAACATTCAT--AAAAAAACCCA-CT-TCAATTC-ATTATTTACA--AAATATCAAGGAAACTCT-TTGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----A-T---CGCCTATA--TATA--TGT---A----------TA-TAAATGGTAATAATG-A--TTGC-AG-T-AAC-AAT---AG------ATAAT-AAAATA----TA-----AAAGTAATTAGATTAA-T--TTTGT-AT--ATTTG-AAT--CCAT--CGAAATTA-----TT-GTTA----TATA----T---AT--ACAG-TTTTTTTTTCTGAA---CTCATTTTTC----TTT-TTTT--T-------TAAGG---------AGTATT-TTTCTTTTTTTC
gi|18 : aaaAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCA-C--AGCAGCTG-TTTTGTAAAC-GA-CGTTA-TAAA-TATT-CGCGA-CGTCATTGAACGACGTTATTCATCTACTTTTCA-TGCC-TTTCTTC----AACATTAC---AGAA-T----ATCGTTATTAACGCCCTGCAT---TAAAAGGAAATTCGAATACTCAT-TAAAAAAAACCT-CA-TCAAT----TTATTTAAAAGAAATGT----GAATATGT-TT-TTCAACTTT--CATatccatcaattcccctctt
gi|19 : T-GA-CGTTA-TAGA-TATTGCGCGA-CGTCATTGAACGACGTTATTCATTTTCTTTTCA-TGCC-TTTCTTC----AACAACACCATAGAA-C----AGCGTTATTAACACCCTGCAT---TAAAAGGAAATTCAAATACTCAT-TAAAAA---CCA-CA-TCAATTT-ATTATTTATA--AAATATCAAGGAAAATAT-TTGTAGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---GGCC--G---TATA--------------------A-T-----------ATT-G--TCA-------AAC-AAT---AG------ac
gi|2 : AACGCTTCATGTCA-ATAAAAGAAAAAAAAAAATGGGT-G-TAATAA-A-GTT-ACCGCGA-TCCG-ATG-TTTTTAACAAA--AGTG-TTTCTTT-ATACCT-GTAATACGGCA-AT--GA-ACTG-----C-TTACTTAAATTCTAACTTGTAT-GGCAATTGCGTTCAACGCA-AAT--AAATTTCCCAA-CTCCAC-GATTC-TCT---CA-ACACAT-AAAGCTAT-TGAAGTACATGTAATG-TAGAGT--GGG-AAAGATATTAG--TTA-TT-TA-TGAGTGATTCTCTCGAGTTCGTCCAAT-TTTCAAAATG-CACATATTGCACG-TGAGTC-TAGTTTTCAAAAATCAA-AAGCGTGC---CTCTCTAGAATGAAGCGGCATGAACCGGCACTT-TTTTAAGGCGCACTGAGAAAAGTGAATGAAACG-TG-ACGCCAGTAACAAT-GTATACTCAA-ACGCCCCC-CCCC-TTC----C---TC---T-T-C-TCTTAATTGATCTCTTCCCATGGT-TCCA--TTTTTTACTC-ATTTCATTTTACTTT-TTAAAAATGTAGTTGTTTTCGA
gi|2 : AAACTACTAAATTAAAATAATG-----AAGAAAGAAA--AAAGAAAAATTTGTAAA-ACACGCTCGCTG-AT-CTCTGTATAT-TGTCTGTATTAAAAATACAGATAGAATAAGCCCCATATCACTTCATTcgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaactactaaattaaaataatgaagaaagaaaaaagaaaaatttgtaaaacacgctcgctgatctctgtatattgtctgtattaaaaatacagatagaataagccccatatcacttcattgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|22 : aacgcttcatgtcaataaaagaaaaaaaaaaatgggtgtaataaagttaccgcgatccgatgtttttaacaaaagtgtttctttatacctgtaatacggcaatgaactgcttacttaaattctaacttgtatggcaattgcgttcaacgcaaataaatttcccaactccacgattctctcaacacataaagctattgaagtacatgtaatgtagagtgggaaagatattagttatttatgagtgattctctcgagttcgtccaattttcaaaatgcacatattgcacgtgagtctagttttcaaaaatcaaaagcgtgcctctctagaatgaagcggcatgaaccggcacttttttaaggcgcactgagaaaagtgaatgaaacgtgacgccagtaacaatgtatactcaaacgcccccccccttcctcttctcttaattgatctcttcccatggttccattttttactcatttcattttactttttaaaaatgtagttgttttcgacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTGCAAGTT--CGTCCAAAGT--GTAGA-CGTAAGTAAC-TGAACGA---GCA-TACA--T-----A----------TA-T-----------ATG-T--TAGC-GGCT-ATCGAATTTCAG------AGATC-CTAGTA---GTA-----A----G--TAGA-TCA-T--TTTATAATG-TTTTG-AATCGCCATTCCAAGATGAAAAGTGT-G-TT----TAAAGTT-G---ACGAATAGTTCT----------A---GGTAGGTATgactatggcccgttaatatttcgttttacctcctttcatacatgtttaatcaaaccgattaacagtatacaatatccttttcttccatcatcttctccctttttggatgttaaaaagaaatgtggatgtgtttctcaactttcattacaaagaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatggggagcggagtggacgaaacacggactagcgaagattgacaaagacggaatttaagcacgcgagttaccacacatccgaaaacttttaagacatattttaactaatatattttttgccagtatgactataagatcatatttgtcattttcaaaattcaaatgacccttttttttcgatgaaattcatgcggccacgtgccttaattacatatacctgagcagggtggtgaaattgtgtaatgtcactaaaaacatgattttttactgtatgtaacaggacgaaaagttaacgttttgggtgtttctaatgcgtattgcaaaacataataaacatagaaaaataagtttgttcattcccagatcagaaatgataaattatgaagtaactgtgagggtgtatgacccatgcctctacttgcctgtgatgcgtaaccttgttgtatatgaaacacaagtgtatgaggaaaacaattatgatttaccaattaaaacatgccgactttttcatttatgctaacaaatgattaaatcatgtgaacgtaatatattttaaaatgtattctttctctccctttgtcttgaaaaaagttaagagtgtccgctaatacacggtcaaacattttctgaataaaatttgaagtgcatggatctcctgcctaattttctgaagaaatttgtccgctgttggacttcataaaaataacggatttaaacgcggttatctgaagagtttgcatgcggaaacgaaaggagactttacgaaattaaacgaaaccttgatatacctcagtatggattggtaaagcagcttttgttatattcataattgtatcggtaatttttttacgctctttatcatcaagcaattgtacgtcacaatgaaaattacacgaaaaaaactttcgagtcgtaagatttggcgtacccaaaaccgtgacgtaggcaaacccgcgaccttactta
gi|23 : TTTTC-AAAAT--G-AAGCGTGC---C--TCTAGAAAAAG-C-ACATGAACC-GCA--A-TTTTAA-GCGCACTGAG-AAAATGAAG-AAACA-TGCATGCC-GAAACAAT-GCTCACTC-A-ATACCCCCACCCCACCCCCTGC---GC---C-TCCTTTTTAATTGATCTCTT--CATGGTATCCA--
gi|24 : ttt-CTTGATGA-T-ATT---------TATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TTG-A--TGCAAAAA--AAT-T-ATAGGGT-AG-TCGAGCT-CGTT--------------------TG-T--CAAA-G-T-TT--GA-T-------AAAAAC-----------C-GTCA-C--AGCATCTG-TTTTCTAAAT-GA-CGTTA-TAAA-TATT-CGCGA-CGTC
gi|26 : TCCAAT-TTTCAAATCGCCACGTATTGCACG-GTGTCC-TAGTTTTC-A-------------------C-CTCTAGAAAAAGGT-GCATGAACC-GAA--T-TTTTAA-GCGCACTAAG-AAAGTGAAT-AAACC-TGCACGCC-GAAACAAT-GTTCACTC-
gi|27 : CGTAGGT-C-GCGGGTATA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----CAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCG-TTTTTTAGT
gi|28 : --TACA--TTTGCGA----------TA-------------ATG-A--TCGC-AG-T-AAC-AAT---AG------ACAAT-ATAATA----TA-----A----TAGTAAA-TAA-T--TATTTCGT--TCTTG-AATC-CCAT--CAAGGTTA----CAT-GTAT----TAGTCATGT---AC--ATA
gi|3 : cgtgtaACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCCC--GAAAACCCCTCC-TG-AAAATTT-GACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-TT-ATT-TTTCGATAAA-CAG-CACCGTTTTTTTAGTAATT-ACGTTGTA--AA-CAT--AC------CATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ATG-----GTA-ACTGACT-T-T--T-TT--GTTGTATAATTCGATCAGCTTAAAA-TG---G-A--GAGAATTTGG--TGCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-AAA----CAA--AAACAAT-TT-GAAAAAT-A-TTG-A--TGCAAAAA--AAT-T-ATGGGGT-AG-TCGAGCT-CGTTTTT---ATGAA-AC-AAAGATG-T--TAAT-G-T-TT--GA-T-------AAAAAC-----------T-GTCA-C--AGCAGCAG-TTTTTTAAAT-GA-CGTTA-AAAA-TATT-CGCGA-CGTCATTGAACGACGTTATTCATTTACTTTTCA-TGCC-TTTCTTC----AACATCAC---AGAA-T----AGCGTTATTAACGCCCTGCAT---TAAAATGAAATTCGAATACTCAT-TAAAAACCCCCA-CA-TCAATTT-ATTATTTATA--AAATATCAAGGAAAATGT-TTGTTGAAATTT--CGTCGAAAGT--GTAGA-TTTA-----C-T---CGCC--GC--TACA--TGT---A----------TA-T-----------ATG-A--TCAC-AG-T-AAC-AAT---AG------ATAAT-ATGATACTTGTATAAAGG----AATTAAA--AA-TAATTTATAAT--ATTTG-AATC-CCAT--CAAAA-TA----TAT-GTTT----TAAAGAT-T---AC--ATAG-TCC----------A---GTCATGTATC----TAT-ATTCATTAACC--AAAAGA---------ACGAG-------TTTTTTCTAT--TTTGACG---CAT-------------C-----CTCTTCC-AA-AA-TCA--------AAAACG---TTTTTAACAACAACGCAGTTCAA--A-AAT---TAT-TAATA--TTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TG-TTTTGT-CT--AAT-TT-TC-ACAAT---T-T-CGA-CACAGTT-CCTAATACTTGTTG---CGTTATAG-AG-TCTTAA-A-GTA--CA----CATGAGCAGT--CCA-TCCACGGA-CATT-CA-TGTTGGAAACTCGGAACCAAACGCTACG-TGAAC-TTCCATGTCA-ATAAAAAAAAAAAAA----CTGT-GTTAATAA-A-GTT-ATCGC-A-TCCG-ATG-TTTT--ACAAATTCGTA-TTTTTTTTATACAT-GTAATTCAGCA-AT-TGA-ACTG----AC-TTACTTAAATTCTAACCTGAAT-G-TAAATGCGTTCAACGCA-ATCTTATATTT--AAA-ATCCAC-GATTC-TTT---CA-ACACATAAAAACTATCTAAAGTACTTGTAATGAT-GAGTGGGGG-AAAGAAATTAGTTTTA-TT-TGCTGAGTTATTC--------TCGTCCAAT-GTTCAAATTGCCACGTATTGCACG-TGGTCC-TAGTTTTCAAAAAT--GAAAGCGTACGTTC-CTCTAGAAAAA-GC-GCATGAAAC-ACA--T-TTTTAA-GCGCACTGAG-AAAAGGAAG-AAACG-TGCATACC-GAAACAAT-GTTCACTC-ATATACCCCC-CCCC-TCC----CTTGGCCTTC-T-TTTTTTAATTGATCTCTT--AATGGTATCCA---TTTTC-CTCAATTTCATTTTACTTC-TTAAAAATTTAGCTG-GTTCGAACTCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACTAAATTATAATTATG-----AA--AAGAAA-GAAAGAAATATTTGTACA-ACAC---CACTGTTTCCTCAGTATTTGTGTCTGTATTCAAAATACATAT-AA--AAGC----TATCACTTCATTtacatgt
gi|30 : AAAAA-A-GTT-GCCAA-A-TCCG-ATG-TTTT--ACAAATTTGTATTTTTTTTTATACAT-GTAATTCGGCA-A
gi|31 : T--GTAGA-TTTA-----C-T---CGCC--GCTATACA--TGT---AAAATATACCGTA-T-----------ATG-A--TCGC-A
gi|32 : TTT--GC-TG-TTTTGT-CT--AAT-TT-TC-ATAAT---T-T-CGA-TCAAGTT-CCTAAT-
gi|33 : ACAAT-TT-GAAAAAT-A-TTG-A--TGCGAAAA--AAT-T-ATGGGGT-AG-
gi|34 : TAGGT-C-GCGGGTTTA-CAG-ACCTTCTC--GAAAA-CCCTCC-T
gi|35 : ACGTAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--
gi|5 : tttaCGTAGGT-CCGCGGGTTTAACGG-ACTTTC-----GAAACCCCTC--TG-AAATATT-GACA-GAGGG---TA--CTTGACAATG-TATAATATACTACTGT-GTTAAAA-TTTATTATTTCGA--AA-CAGGCACCGCTTTTTTAGTAATTCACGTCATA--AAACAT--AC-------ATTGTTTTAAC-G----CA-G-C---------GAG-ACTGTTTCC--------------TTGA--ATTTATAT-G-TAAATAGTAAG-----GTG-ACTGACT-T-T--TACT--GTTG-ATA-TTC----AGCTTAAAA-TG---G-ACAGAGAATTGGT--TGCT--GT---TCTTACTTGATGA-T-ATG---------CATAT------AAAAA---CA-AAA----CAACAAAACAAT-TT-GGAAACT-A-TTGCA--TGC-AAAA--AAT-T-ATGGGGT--G-TCGAGCT--GTTTTT---ATGAA-ATTAAAGATG-T--CAAAAG-T-TTTGGA-T-------AAAAAC-----------C-GTCC-T--AGCAGCTG-TTTTTTCAAT-GG-AGTTA-TAAA--ATT-CTCGACCGTCACTG-ACGA---TATTCA--TACTC-----TG-C-TTTCTTC----AAAAACAC---ACAC-CATGAAG-GTTATTAACGCCCTG--T---TAAAAGGAAATCTTGATACTCAT-T-AAAAAACCCA-CATTCAATAT-ATCAT---TA--AAATATCAAGG-AAATATATTG-TGAAATTT--CGTCGA---T--GT-GA--TTA-----C-T---CGCC--GC--TATACTTGT---A----------CA-T-----------TTGTA--TAGT-AGTT-CGC-AGT---A-------AT--T-ATAATA---GAT-----G----AATTAAA-TAA-TG-TTTATAAT--TTCTG----T-CCAT--CAAATTTA----TTT-GTTTA---TAAAATT-T---AC--AAAG-TCT----------A---GTCATG-GTC----TA--ATT---TAACCA-AAAAGA---------GAGAGT-TGGTTTTTTTTCTA---TTTGACGATACATTTAGAA-GATCCAC-----CTC-TCC-AATAA-TTACCGGTAATAAAACTCTTTTTTTAA-AACAA-GCAGATCAA--ATTAT---TAA-TAATA--TTT---AGCTTGG-AATGCAA-GATTCAC-TGAAACTATTAT--GCATGTTTTTGTGCT---AT-TT-TT-ACAAT---TAT-CGA-CC-ATTT-CCTAAT-CCTGGTG---CGTTATAGCAGCTCTTAG-A-GTAAGGA-C--AATGGGTAGT--CCATTCCACGG--CATT-CA-TGTTGG-AACT--AGACCA
gi|6 : TCATAAT--TTTT---ATC-CC--------CTTA----TTTTATTTCGGATATATAT-TTAAAC--TTAT-TCT----------ATCTGACATGTATA----TAT-G------AATCATAAGATAG--------AGGAGT-ATTTTTTCTTTCTAT--TTAGACGATATATTTAAAAAG----ACAAACCCTCTTCCCAA-AACTCACT------AAAACGC--TTTTTATAAAAAACGC---TTAATCA-CAT---CATGTAATC---------GCTTGGCAATGC-ACGAATCACTTGATAA--TTCTTCGC-TG-TTTTGT-CTCTACTGTT-TCTACAAT---T-TTCGAGCCACGTTTCCTAAT-CCTGCTGGTTCATTATAG-AG-TCTTAGCACGTA--CA-C--GAAGAGTAGTAGCCA-TCCACGGAACATTTCACTATTGTAA-CT--G-ACCAAACGCTACGGTTAAC-CTTCTTGTCATATAAACGAAAAGGAA----G-GTCGGTAAGAATATGTT-ACTGA-AATCCGTATG-TTT---ACAAAT-CGTG-TTTCTT--ATACTTTGTAATTCGGCACATCTGACACTGCATGAC-TTACCTAAATTCTTAACTGAAT-G-CAAATGAGTTCAACTCATAAC--ATATTTCCAAA-ATCCAC-GATT--TCTAGTCA-ACA-ATAAAAGCCATTTAAAGTAA-TAAAACA-T-GACTGGGGATAAAGAAATTAGTTTTA-TTGTACTGGGTGATTCTCTT----TTGTCCAATGTTTCAAATCGTCACGTATTGCACG--GGTCCTTAGTTTT
gi|7 : TAGGT-C-GCGGGTTTA-CGG-ACCTTCTC--GAAAACCCCTCC-TA-AAAATTT-TACA-GAGG----TAT-CTTGACAATG-TATA---TACTACTGT-GTAAAAA-----------------A-CAG-CACCGTTTTTT-AGTAATT-ACGTTGTA--AA-CAT--ACATGTACCATTGTTTTAACAG----CA-G-C---------GAG-ACTGTTTTCCG------------TTGA--ATT-ATATAG-AAAATA--ACG-----GTA-ACTGACT-T-T--T-TTTTGTTGTATA-TTC----AGCTTAAAA-TG---G-A--GAGAATTTGG--TGCT--GT---TCTT-CTTGATGA-T-ATT---------CATAT------CAAAA---CG-ACA----CAA--A----------------T-A-TTG-A--TGCAAAAA--AGT-T----GGGT-AG-TCGAGTT-CGTTTTT---ATGAA-AT-AAAGATG-T--CAAA---T-TT--GA-T-------AAAAAC-----------CGGTCA-CA-AACAGCAT-TTTTTTTAAT-GA-CGTTA-TGAA-TATT-CGCGA-CGTTAT------------TTCGTTTAC-TTTCA-TGCT-TTTTCTCAAAAAACATCACAA-AGAA-C----AGCGTTATTAACGCCGTGCATTAATAAAAGGAAATTCGAATATTC-C-TAAAAAAAtca
gi|7 : AAAAAAACAAAACA-TCAATTT-ATTATTGATA--AAACATCAAGGAAAATGT-TAGTTGAAATTT--CGCCGC---T--ATACA-TGTA-----CAT---TATC-------ACA--------------------G-T-----------ATG-A--TCGC-AT-T-AAC-AAT---GG------ATAAT-aaaaaaaaaaaaacaacaaacaacaacaaaaaaacaaaacatcaatttattattgataaaacatcaaggaaaatgttagttgaaatttcgccgctatacatgtacattatcacagtatgatcgcattaacaatggataattataatataat
gi|8 : taggtcgcgggtttacggaccttctcgaaaacccctcctaaaaattttacagaggtatcttgacaatgtatatactactgtgtaaaaaacagcaccgttttttagtaattacgttgtaaacatacatgtaccattgttttaacagcagcgagactgttttccgttgaattatatagaaaataacggtaactgacttttttttgttgtatattcagcttaaaatggagagaatttggtgctgttcttcttgatgatattcatatcaaaacgacacaaatattgatgcaaaaaagttgggtagtcgagttcgtttttatgaaataaagatgtcaaatttgataaaaaccggtcacaaacagcattttttttaatgacgttatgaatattcgcgacgttatttcgtttactttcatgctttttctcaaaaaacatcacaaagaacagcgttattaacgccgtgcattaataaaaggaaattcgaatattcctaaaaaaaaaaaaaaaaaaaacaacaaacaacaacT---AA------ATGAT-ATAATA---GTA-----A----A--TAAA-TAC-T--TTGGTAAT--ATTTG---TC-GCAT--CAAATTTA----TTT-GTTT----TAAAGAT-T---GC--ATAA-TCT----------A---GTCATGTATC----TCT-ATTC--TAACCA-AATAT----------ACGAAT-TTTTTTTTTTATTATTATTTGACGATACATTTAGAA-G----AT-----C-----------A-TTAT-------AAAACGC---CTTTAACAACAACGCAGTTCAA--A--AT---TAT-TAATAATTTT---AGCTTGG-AATGC-A-GATTCACTTGAAAC--TTCT--GC-TG-TTTTGT-CT--AAT-TC-TT-ACAATATGT-T-CGA-CCAAGTT-CCTAAT-CCTGTTG---CGTTATAG-AG-TCTTAG-A-GTA--CA-CGACATGGGTAGT--CCA-TCCACGGA-CATT-CA-TGTTGG-AACT--GGACCAAACGCTACG-TGAAT-CTTCATGTCA-ATAAAAGGAAAACAA-----TGT-GATAATAA-A-GTT-ACCGC-A-CCCG-ATG-TTTT--ACAAATTCGCA-TT--TTTGATACAA-GTAATTCGGCA-AT-TCA-ACTG----AC-TTACTTAAATTTTAAACTGAAT-G-CAAATGTGTTCAATGCA-tataatataat
gi|9 : actaaacatttttttttttttaattaagaaatcataagaatttttcggtcgtcaattcatagattttttgttaagccatgcagtttagagattatGTAGGTGC-GCGGGTTTA--GG-ACCTTCTC--GAAACCCCGTCCCTA-AAAATTT-GACATGGGG----TAT-CTTGACAATG-TATA---TACTACTGTTGTAAAA--TT-ATT-TTTCGATAAAACAG-CAGCCTTTTTTTAGTTATT-AC-TTGTAGAAA-CAT--AC-------ATTGTTTTAACAG----CA-G-CAGTACCATTGAGGACTGTGTTTCGCGAGTGTGTGGGTGGAGGATT-ATATAG-AAAATA--ACGTGTGTGTA-ACTGACTGTGT--T-TT--GTTGTATA-TTC----AGCTTAAAAGTG---GGA--GTGAATTTGG--TGCT--GT---G-TT-CTTTATGACT-ATT---------CATATT-----CAAAA---CG-AAA----ACA--AAACAAT-TTTGAAAAAT-A-TTG-A--TCCGAAAAACAATGT-ATTGGG--AGTTCGAGCT-CGTTTTT---ATGAATAT-AAAGATG-T--CAAA-GTT-TT--GA-TAA-----AAAAAC-----------T-CTCG-CTGAGCAGCAG--TTTTTAAAT-GATCGTTATTGAA-TATT-CGC
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|4 ): AAGTTTCTTCATCATTTTCGCATTTTCGAATGTTAAAAAAATGTGCATGCATACAAAAGACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGGGCAGGGTGAATGTGACCGAAAACTCTTGTGACTAGCGAAGATGAAAAAGACGGAATAAACAAGTGATTCATACACATCCGAAAAATATTAAGATCAATTTTTAACATTATATTTTTGCCAGTATCGACTTTGAATCGGTTTGCTCATTTTTCAAAATCAAATGGCCTTTTTCCCCAATGAATTATTTGCACAGGTGCGCCATAATGCAATATACCGACAGTGGTGAAATCCGGGTGAACATTGTGTAATGTCACTATAACAATAGATTTTTGCCTAGTATGGTAAAGGAAGAACGAAAGAACGTGTTTGGCGATTTCTAATGCAAGTTTTAAAATATTATCAACGTAGAAAAGAAGATAAGTTTGTCTATCCCAAGATAAGAAATGATAAAACATGTATAAGGTAACGAAACTGTTTGTGTCATTGTATCATGCCTCTAGTGTCCGTTTCTGTAACCTTGTCTGTATTTATGGCAAATACAGATAATACTGTACCAATGCATATCATAGTGCATAATAAACATTGTGATTTTACAATTAAAGCATGTGACGAGTTTAGTTTTCTCGTTTATTATTAAATTTATTGTTTGTGATCAAAAATGAAAACCATACTGTGCATAATATATTAAAGTGTATTTTATCCGTCTCTCTTTGTCTGAAAATTTTAAAGAGTGTTCTGCTAATACGCGTCAAATTTCCTGAATAAAACCTTTAAAGTGCCCCACATGGTCTCCCCTTTCTAACTTTTCTCCGTAAAAGATTGCACCCAGCTTCATATTTTTCCCGAAAACTGTCGCTGTTATTACTTTATCATATAAATTCATCTGCCTTGCGTCGAAATGAAAGGATAGACTTTACGATAGTAAACGAAAACATTGATACTATCTAAAGCATGATTAAAGCAATTTGTTGTT
Unaligned ( gi|11 ): CCATTTGGTCCTGAAGAAATTTTAGAGTGTCCGCTACATACGCGTCAAACTTTCTGAATAAAACTTAAAAGTGCATGGATCTCCTGCCTAAATTTTCTGCTAAAGTTGTCAGCCTGTCTTCGCTTTCCCCCAAAATTGTCCGCTTTTAGACTTCATAAAATTAAAGGGACTGGAAACGCGTTATCTCAAAAGTTTTGCATCGGAAAACGAAAGGCGAAGACTTACAAACTTAAATGAAACCTGATATCACCTTCAATATGGTAAAAGCAGCTGTTGTTAATAGTTCATAATTGAGTATCATCGGTAATTTTAATTTTTACGCCTCCTTTCTATCAACGCAATTGACGTCACAATGAAATGTACACACGAACCAAAAGATTCGACGCGTTAGATTTTGCGTTACCCCAAAATCGCTGACGTAGGCAAACCCGCGACCTACGTTATAAATCATAAAGTCGCAA
Unaligned ( gi|15 ): TCTAAAGTGCTATGAGTCTCCTGGCCTAATTTTCTGTAAAGTTTGGGTGGACATGTCAGAATAAAAGGGATGAAACGTGAACTATCTCAAGTTTTGCATTGGAAACGAAAGGAAGACATTCGAAATGAAACGAAACCTTAATATACCTCAGTATGTTAAAGCAGCTGTAGTTAATACTCATAATTAATATCGGTAATTTTTTACGCTCTTTATCATCAGTCAATACTATCAACGCAATCGTTACGTCACCATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGAAATGCGTACCCCAAAACCGTGACGTAGGCAAACCCGCGACCTACGTTA
Unaligned ( gi|16 ): TTTGCATCGGAACTGAGTCCCAAGGAAGACTTAATCGAGAAATAAGAGCGAGAACCTTGATTATACCCTCTTTGGTGTAATGCTGGTTTTAGGAGGCCTAAACAGGCAGCCTATTTGTTAATATCTAAAGTGCATATCGGTAAAGTTTTTACGCTCTCTATCATCAGTCAATCTATCAAAGAATTGCTTACGTCACAATGAAATGTACACGAAAAAAGACGTCGAGTCGTAAGGATTTTGCGCCCGGTACCCACAAAACTGCCGCTGTTACGTAGCCGAAAAACGCTGCGACC
Unaligned ( gi|17 ): TAATGAAAAAGAAAAAAAGTACAGAAATATTTGTAAAACATTCTGGAAAATTCTTTCCATGGCCATGTAGTAATATGATATGTTTGTATTCAAAATATAGACATGTATATAAAGCTACTAAATTAGATCACAATCTTACCCGCTTCAATGGTATTGACTATGGGTTAATATTTCAGTTTCCCCGGAACCTTCTCACAGTAATAAGGCAAACGATTTAAGTATCAATTAATAATCTTATTATATTCTTTTTACATCACTTTCCACCCAT
Unaligned ( gi|20 ): CCTCTGTAAGAATTGATATTATAACAGGATGGAATGCTTACCTCGAATTTTGCATCGGAAACGGAAGAAAAGACTCTTAGAAAATTAAACGAAGCATGATATATTTCAATATGATGAGATAATTTAAATTTAAACGCTTATAAATCTATTCACTACGCTAATTGTTACATGACCTACTCACAATGAAATGTGCACGAAAAAAGACCAATCGTAA
Unaligned ( gi|21 ): CAAATATTTTCCCATCGGAATCGAAAGGAAGCAAAATTAAATGAAACATATTCATATCGGTAAAAAATTGAAATCTTTATTATCTATGCACAACATAAAGGCAATTGTTACGTCACAATTGAAAGTACACAGAAAAAGACGTCGAGTCGTAAGATTTGCGTACCCCAAAGCCGTGACGTAGGCAAACCCGCGACCTACGTTAAACTATAAAT
Unaligned ( gi|25 ): TATTGCGTTAACGTAATTTCAACCAAAAATGACATTTTGACAACTCATTTTACCACATCAGAAATGAATGAAAGGATAAATGATAGGGGCTGGGATCATGCTCCATGTCTCTAGTGCATGTGATCTGTACCCTTGTTTGTATATGAA
Unaligned ( gi|29 ): CGAACTAAATTTTTTTTTATTAAGAAATCATAAAAAAATTTCGTCCAATCATAATTGTTGTTAAGCCATCAGTTGAAAGATTATTAAATGATAGTGAAATAAAA