lowQualScore                  :                                  11111       1                1                                                                                                                  
lowQualScore                  :    3    3    44  6     2         00000 1 2   1     33     555 7 555    77  33     2 2   777777         33      2    9 8888      2  5  2      33       1  8 3                3    
lowQualScore                  :    .    .    ..  .     .         ..... . .   .     ..     ... . ...    ..  ..     . .   ......         ..      .    . ....      .  .  .      ..       .  . .                .    
lowQualScore                  :    6    1    22  7     9         00000 9 9   4     99     000 1 000    44  99     9 7   777777         77      7    2 9999      9  7  9      99       7  6 1                1    
consensus                     : TTT-TGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-ATCTGGCAG--AAATC---TTT---CGTA-CTT--TCAAA-A-TAC------GCTTCAAAA--TGAAAT-GCACCC-G-CGATAGC-GA-TA-TGCCAA--CAGCTTTGGCAA-TATCACGAATCGTGTA-TCTG
Reference ( gi|132330 )       : TTT-TGGT-CATC--TGCCAATA-TATGCGGTA-----TGC-ATCGGGCAG--AAATC---TAT---TGTA-TTT--TCAAA-A-TAC------GCTTCAAAA--TGAAAT-GCACTC-A-TGATAGC-GA-TA-TGCCAA--CAGCTTTAGCGA-TATCACGAATCGTGTA-TCTG
gi|132329                     : TTTATGGT-CATC--TGTCAATA-TGTGCGGTA-----TGC-ATTGGGCAG--AAATC---TTT---TGTA-CTT--TCACA-A-TAC------GCTTCAAAA--TGAAAT-GCATCC-A-TGATAGC-GA-TA-TGCCAA--CAGCTTTGGCAA-TATCACAAATCGTATA-TCTG
gi|132328                     : TTT-GGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-ATCTGACCG--AAATT---TTT---TGCA-CTT--TCAAA-A-TAC------GCTTCAAAA--TGAAAT-GCACCC-A-TGATAGT-GA-TG-TGCCAA--CAGCTTTGGCAA-TATCACAAATCGTGTA-TCTG
gi|132332                     : TTT-TGGT-CAGT--TGTCAATG-TATGCGGTA-----TCC-ATCTGGCAG--AAATC---CTT---CGTA-CTT--TCAAA-A-TAC------GCTTCAAAA--TGAAAT-GCACCC-G-TGATAAC-GA-TA-TGTCAA--CAGCTTTGGCAA-TATTACGAATCGTGTA-
gi|132331                     : TTT-TGCT-CATC--TGTCAATA-TATGCAGTA-----TGC-ATCTGGCAG--AAATT---TTT---TGTA-CTT--TCAAA-A-TACATGTACGCTTCAAAA--TGAAAT-GCACCC-A-TGATTGC-AA-TA-AGCCAA--CCGCTTTGGCAA-TAACACAAATCAAGTA-TCTG
gi|132333                     : TTT-TGGT-CATC--TGTCAATA-TATGCAGTA-----TAC-GTCTGGCAG--TAATC---TTT---TATA-GTT--TCAAA-A-TGC------ACTTCAAAA--TTAAAA-G-GCCC-A-CGATAAC-TA-TA-TGCCAA--CAGCTTTGGCAA-TATCACAAATCATGTA-TCTG
gi|132334                     : TTT-TGGT-TATT--TGTCAAAA-GATGTGGCA-----TCC-ATCTGACAG--AAAAC---TTT---TGTA-CTT--TCAAA-A-TAC------GCTTGAAAA--TGAAGT-GCACAC-G-CGATGGC-AA-TA-TGCCAA--CAGCTTTGGCAA-TATCACGAATTGAGTA-TCTG
gi|132335                     : TTG-TGGT-CATC------AATA-TATGCGGTA-----TCC-ATCTGACAA--AAATC---TTC---CGTA-CTT--TCAAA-A---------------------TGAAAT-GCACCC---CGATAGC-GA-TA-TGCCAA--CAGCTTTGGCAA-TATCACCAATCGTATA-TCTG
gi|132336                     : TTT-TGGT-CCCC--TGTCAATA-TCTGCGGTA-----TCC-ATCGGACAG--AAATC---TTT---CGTA-CTT--TCAAA-A-TAC------GTTTCAAAA--TGAAGT-G
gi|132337                     :   T-TGGT-CATC--TGTCAATA-TATGTGGTAA----TGC-ATCTG-CAGGAAAATC---TTT---TGTACTTT--TCAAATA-TAT------GCTTCAAAA--TGAAAT-GCACCC-AACGAAAGC-GA-TT-TGCCAA--CAGCTTTAGCAT-TATCACGAATCAAGTA-TCTG
gi|132338                     :   T-TGGTTCATC--TGTCAATA-TATGTGGTA-----TGC-ACTCTGCAG--AAATCCTTTGT---TGTA-CTT--TCAAA-A-TAG------GCCTTCAAA--TGACAT--CACCC-A-AGAAAGC-GATTT-TGCCAA--CAGC-TTAGCAATTATCATGGATCGGCTA-TCT
gi|132339                     :   T-TGGT-CATCGCTGTCAATA-TATGTGGTAATGGGCGA-ATCTGGCAG--GAATC---TGTTTGTGTA-CTTTGTCAAA-ATTAT------GC-TCAAAA--TGAAATGGCAC-C-A-AGAAAGCGGA-TGTTGCCAATCCAGCTTTAG
gi|132340                     :       GT-AATC--TGTCAAGC-TATGCTTTA-----TTC-ATCTAGCAT--AA-TC---TTT---CGTA-CTT--TCAAA---TAC------GCTTCAAA---TGAAAT-GCAACC-G-CGATAGT-GA-TA-TGCCAA--CAGCTTTGGCAA-TAT-ACGAATCATATA-gc
gi|132341                     :       GT-CATC--TATC--TA-TATGTTTTA-----TGCCATCTGGCAG--AAATC---T-T---TGTC-TTT--CCAAA-A-TAT-------CTACAGAAATTGCAAT-GCACCCAA-CGATAG--GATTC-TGCCAA--AAAC-TTAAC---TATTACAGATCATGGAGTCTG
gi|132342                     :                    AATAATATGCTGTA-----TCC-ATCTTGCAT--AAATC---TTT---CGTA-CTT--TCAAA-A-TA-------GCCTGAAAA--TGAAAT-GCACCC-G-CGATAGC-AA-TA-TGCCAA--AAGCTTTGGCAA-TATCACGAACAATGTA-TCTG
gi|132343                     :                                                                                     -TAC------CTTTAAAAA--TAAAAT-ACATCT-G-CGATAGC-GA-TA-TGCCAA--CATCTTTGGCAA-TATCATGAATCGTGTA-TATG





Alignments
lowQualScore                  :    3    2    33        2         99999 1 2 2        33      2 444 666      33 2    2 999999            33      2      888       2  5  2      33       2     5                2    
lowQualScore                  :    .    .    ..        .         ..... . . .        ..      . ... ...      .. .    . ......            ..      .      ...       .  .  .      ..       .     .                .    
lowQualScore                  :    3    9    99        7         33333 1 7 7        77      7 777 666      77 7    7 777777            44      5      333       7  3  7      77       7     7                9    
consensus                     : TTT-TGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGGCAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATCGTGTA-TCTG
Reference ( family-956 )      : TTT-TGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGGCAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATCGTGTA-TCTG
gi|132328                     : TTT-GGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGACCG--AAATTT-T---T--TGCACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-A-TGATAGT-GA-TG-TGCCAA--CAGCTTT-GGCAA-TATCACAAATCGTGTA-TCTG
gi|132329                     : TTTATGGT-CATC--TGTCAATA-TGTGCGGTA-----TGC-A-TTGGGCAG--AAATCT-T---T--TGTACTT--T-CACA-A------TACGCTTCAAAA--TGAAAT-GCATCC-A-TGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACAAATCGTATA-TCTG
gi|132330                     : TTT-TGGT-CATC--TGCCAATA-TATGCGGTA-----TGC-A-TCGGGCAG--AAATCT-A---T--TGTATTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACTC-A-TGATAGC-GA-TA-TGCCAA--CAGCTTT-AGCGA-TATCACGAATCGTGTA-TCTG
gi|132331                     : TTT-TGCT-CATC--TGTCAATA-TATGCAGTA-----TGC-A-TCTGGCAG--AAATTT-T---T--TGTACTT--T-CAAA-ATACATGTACGCTTCAAAA--TGAAAT-GCACCC-A-TGATTGC-AA-TA-AGCCAA--CCGCTTT-GGCAA-TAACACAAATCAAGTA-TCTG
gi|132332                     : TTT-TGGT-CAGT--TGTCAATG-TATGCGGTA-----TCC-A-TCTGGCAG--AAATCC-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-TGATAAC-GA-TA-TGTCAA--CAGCTTT-GGCAA-TATTACGAATCGTGTA-
gi|132333                     : TTT-TGGT-CATC--TGTCAATA-TATGCAGTA-----TAC-G-TCTGGCAG--TAATCT-T---T--TATAGTT--T-CAAA-A------TGCACTTCAAAA--TTAAAA-G-GCCC-A-CGATAAC-TA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACAAATCATGTA-TCTG
gi|132334                     : TTT-TGGT-TATT--TGTCAAAA-GATGTGGCA-----TCC-A-TCTGACAG--AAAACT-T---T--TGTACTT--T-CAAA-A------TACGCTTGAAAA--TGAAGT-GCACAC-G-CGATGGC-AA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATTGAGTA-TCTG
gi|132335                     : TTG-TGGT-CATC------AATA-TATGCGGTA-----TCC-A-TCTGACAA--AAATCT-T---C--CGTACTT--T-CAAA-A------T--------------GAAAT-GCACCC---CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACCAATCGTATA-TCTG
gi|132336                     : TTT-TGGT-CCCC--TGTCAATA-TCTGCGGTA-----TCC-A-TCGGACAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGTTTCAAAA--TGAAGT-G
gi|132337                     :   T-TGGT-CATC--TGTCAATA-TATGTGGTAA----TGC-A-TCTG-CAGGAAAATCT-T---T--TGTACTT--TTCAAATA------TATGCTTCAAAA--TGAAAT-GCACCC-AACGAAAGC-GA-TT-TGCCAA--CAGCTTT-AGCAT-TATCACGAATCAAGTA-TCTG
gi|132338                     :   T-TGGTTCATC--TGTCAATA-TATGTGGTA-----TGC-ACTCT-GCAG--AAATCC-TTTGT--TGTACTT--T-CAAA-A------TAGGCCTTCAAA--TGACAT--CACCC-A-AGAAAGC-GATTT-TGCCAA--CAGC-TT-AGCAATTATCATGGATCGGCTA-TCT
gi|132339                     :   T-TGGT-CATCGCTGTCAATA-TATGTGGTAATGGGCGA-A-TCTGGCAG--GAATCTGT---TTGTGTACTTTGT-CAAA-AT-----TATGC-TCAAAA--TGAAATGGCA-CC-A-AGAAAGCGGA-TGTTGCCAATCCAGCTTTAGGC
gi|132340                     :       GT-AATC--TGTCAAGC-TATGCTTTA-----TTC-A-TCTAGCAT--AA-TCT-T---T--CGTACTT--T-CAAA--------TACGCTTCAAA---TGAAAT-GCAACC-G-CGATAGT-GA-TA-TGCCAA--CAGCTTT-GGCAA-TAT-ACGAATCATATA-
gi|132341                     :       GT-CATC--TATC--TA-TATGTTTTA-----TGCCA-TCTGGCAG--AAATCT-T---T---GTCTTT--C-CAAA-A------TAT-CTACAGAAATTGCAAT-GCACCCAA-CGATAG--GATTC-TGCCAA--AAACTT-----AACTATTACAGATCATGGAGTCTG
gi|132342                     :                    AATAATATGCTGTA-----TCC-A-TCTTGCAT--AAATCT-T---T--CGTACTT--T-CAAA-A------TA-GCCTGAAAA--TGAAAT-GCACCC-G-CGATAGC-AA-TA-TGCCAA--AAGCTTT-GGCAA-TATCACGAACAATGTA-TCTG
gi|132343                     :                                                                                      ------TACCTTTAAAAA--TAAAAT-ACATCT-G-CGATAGC-GA-TA-TGCCAA--CATCTTT-GGCAA-TATCATGAATCGTGTA-TATG





Alignments
lowQualScore                  :    3    2    33        2         99999 1 2 2        33      2 444 666      33 2    2 999999            33      2      888       2  5  2      33       2     5                2    
lowQualScore                  :    .    .    ..        .         ..... . . .        ..      . ... ...      .. .    . ......            ..      .      ...       .  .  .      ..       .     .                .    
lowQualScore                  :    3    9    99        7         33333 1 7 7        77      7 777 666      77 7    7 777777            44      5      333       7  3  7      77       7     7                9    
consensus                     : TTT-TGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGGCAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATCGTGTA-TCTG
Reference ( family-956 )      : TTT-TGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGGCAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATCGTGTA-TCTG
gi|132328                     : TTT-GGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGACCG--AAATTT-T---T--TGCACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-A-TGATAGT-GA-TG-TGCCAA--CAGCTTT-GGCAA-TATCACAAATCGTGTA-TCTG
gi|132329                     : TTTATGGT-CATC--TGTCAATA-TGTGCGGTA-----TGC-A-TTGGGCAG--AAATCT-T---T--TGTACTT--T-CACA-A------TACGCTTCAAAA--TGAAAT-GCATCC-A-TGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACAAATCGTATA-TCTG
gi|132330                     : TTT-TGGT-CATC--TGCCAATA-TATGCGGTA-----TGC-A-TCGGGCAG--AAATCT-A---T--TGTATTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACTC-A-TGATAGC-GA-TA-TGCCAA--CAGCTTT-AGCGA-TATCACGAATCGTGTA-TCTG
gi|132331                     : TTT-TGCT-CATC--TGTCAATA-TATGCAGTA-----TGC-A-TCTGGCAG--AAATTT-T---T--TGTACTT--T-CAAA-ATACATGTACGCTTCAAAA--TGAAAT-GCACCC-A-TGATTGC-AA-TA-AGCCAA--CCGCTTT-GGCAA-TAACACAAATCAAGTA-TCTG
gi|132332                     : TTT-TGGT-CAGT--TGTCAATG-TATGCGGTA-----TCC-A-TCTGGCAG--AAATCC-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-TGATAAC-GA-TA-TGTCAA--CAGCTTT-GGCAA-TATTACGAATCGTGTA-
gi|132333                     : TTT-TGGT-CATC--TGTCAATA-TATGCAGTA-----TAC-G-TCTGGCAG--TAATCT-T---T--TATAGTT--T-CAAA-A------TGCACTTCAAAA--TTAAAA-G-GCCC-A-CGATAAC-TA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACAAATCATGTA-TCTG
gi|132334                     : TTT-TGGT-TATT--TGTCAAAA-GATGTGGCA-----TCC-A-TCTGACAG--AAAACT-T---T--TGTACTT--T-CAAA-A------TACGCTTGAAAA--TGAAGT-GCACAC-G-CGATGGC-AA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATTGAGTA-TCTG
gi|132335                     : TTG-TGGT-CATC------AATA-TATGCGGTA-----TCC-A-TCTGACAA--AAATCT-T---C--CGTACTT--T-CAAA-A------T--------------GAAAT-GCACCC---CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACCAATCGTATA-TCTG
gi|132336                     : TTT-TGGT-CCCC--TGTCAATA-TCTGCGGTA-----TCC-A-TCGGACAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGTTTCAAAA--TGAAGT-G
gi|132337                     :   T-TGGT-CATC--TGTCAATA-TATGTGGTAA----TGC-A-TCTG-CAGGAAAATCT-T---T--TGTACTT--TTCAAATA------TATGCTTCAAAA--TGAAAT-GCACCC-AACGAAAGC-GA-TT-TGCCAA--CAGCTTT-AGCAT-TATCACGAATCAAGTA-TCTG
gi|132338                     :   T-TGGTTCATC--TGTCAATA-TATGTGGTA-----TGC-ACTCT-GCAG--AAATCC-TTTGT--TGTACTT--T-CAAA-A------TAGGCCTTCAAA--TGACAT--CACCC-A-AGAAAGC-GATTT-TGCCAA--CAGC-TT-AGCAATTATCATGGATCGGCTA-TCT
gi|132339                     :   T-TGGT-CATCGCTGTCAATA-TATGTGGTAATGGGCGA-A-TCTGGCAG--GAATCTGT---TTGTGTACTTTGT-CAAA-AT-----TATGC-TCAAAA--TGAAATGGCA-CC-A-AGAAAGCGGA-TGTTGCCAATCCAGCTTTAGGC
gi|132340                     :       GT-AATC--TGTCAAGC-TATGCTTTA-----TTC-A-TCTAGCAT--AA-TCT-T---T--CGTACTT--T-CAAA--------TACGCTTCAAA---TGAAAT-GCAACC-G-CGATAGT-GA-TA-TGCCAA--CAGCTTT-GGCAA-TAT-ACGAATCATATA-
gi|132341                     :       GT-CATC--TATC--TA-TATGTTTTA-----TGCCA-TCTGGCAG--AAATCT-T---T---GTCTTT--C-CAAA-A------TAT-CTACAGAAATTGCAAT-GCACCCAA-CGATAG--GATTC-TGCCAA--AAACTT-----AACTATTACAGATCATGGAGTCTG
gi|132342                     :                    AATAATATGCTGTA-----TCC-A-TCTTGCAT--AAATCT-T---T--CGTACTT--T-CAAA-A------TA-GCCTGAAAA--TGAAAT-GCACCC-G-CGATAGC-AA-TA-TGCCAA--AAGCTTT-GGCAA-TATCACGAACAATGTA-TCTG
gi|132343                     :                                                                                      ------TACCTTTAAAAA--TAAAAT-ACATCT-G-CGATAGC-GA-TA-TGCCAA--CATCTTT-GGCAA-TATCATGAATCGTGTA-TATG


blockSeqs                     :    A    T    GC        A         ATGGG G C C        GA      G TTG TGT      TG T    T TACATG            AT      G      AA        G  T  T      TC       A     T                G
blockSeqs                     :    .    .    .         .         A     G . .        .       . .   T        .  .    . T                 .       .      AA        .  T  .      .        .     C                .
blockSeqs                     :    .    .    .         .         .     G . .        .       . .   T        .  .    . .                 .       .      A         .  .  .      .        .     .                .
blockSeqs                     :    .    .    .         .         .     C . .        .       . .   T        .  .    . .                 .       .      A         .  .  .      .        .     .                .
blockSeqs                     :    .    .    .         .         .     A . .        .       . .   C        .  .    . .                 .       .      A         .  .  .      .        .     .                .
blockSeqs                     :    .    .    .         .         .     C . .        .       . .   T        .  .    . .                 .       .      G         .  .  .      .        .     .                .
blockSeqs                     :    .    .    .         .         .     C . .        .       . .   T        .  .    . .                 .       .      A         .  .  .      .        .     .                .
blockSeqs                     :    .    .    .         .         .     C . .        .       . .   C        .  .    . .                 .       .      G         .  .  .      .        .     .                .
blockSeqs                     :    .    .    .         .         .     G . .        .       . .   C        .  .    . .                 .       .      A         .  .  .      .        .     .                .
blockSeqs                     :    .    .    .         .         .     G . .        .       . .   T        .  .    . .                 .       .      A         .  .  .      .        .     .                .
blockSeqs                     :    .    .    .         .         .     G . .        .       . .   T        .  .    . .                 .       .      G         .  .  .      .        .     .                .
blockSeqs                     :         .    .         .         .     T . .        .       . .   C        .  .    . .                 .       .      G         .  .  .      .        .     .                .
blockSeqs                     :         .    .         .         .     G . .        .       . .   C        .  .    . .                 .       .      G         .  .  .      .        .     .                .
blockSeqs                     :                        .         .     C . .        .       . .   .        .  .    . .                 .       .      .         .  .  .      .        .                       
blockSeqs                     :                                                                                      .                 .       .                                                              


blockSeqCons                  : 
originalCons                  : TTT-TGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGGCAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATCGTGTA-TCTG
finalCons                     : TTT-TGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGGCAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATCGTGTA-TCTG





Alignments
lowQualScore                  :    3    2    33        2         99999 1 2 2        33      2 444 666      33 2    2 999999            33      2      888       2  5  2      33       2     5                2    
lowQualScore                  :    .    .    ..        .         ..... . . .        ..      . ... ...      .. .    . ......            ..      .      ...       .  .  .      ..       .     .                .    
lowQualScore                  :    3    9    99        7         33333 1 7 7        77      7 777 666      77 7    7 777777            44      5      333       7  3  7      77       7     7                9    
consensus                     : TTT-TGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGGCAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATCGTGTA-TCTG
Reference ( family-956 )      : TTT-TGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGGCAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATCGTGTA-TCTG
gi|132328                     : TTT-GGGT-CATC--TGTCAATA-TATGCGGTA-----TGC-A-TCTGACCG--AAATTT-T---T--TGCACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-A-TGATAGT-GA-TG-TGCCAA--CAGCTTT-GGCAA-TATCACAAATCGTGTA-TCTG
gi|132329                     : TTTATGGT-CATC--TGTCAATA-TGTGCGGTA-----TGC-A-TTGGGCAG--AAATCT-T---T--TGTACTT--T-CACA-A------TACGCTTCAAAA--TGAAAT-GCATCC-A-TGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACAAATCGTATA-TCTG
gi|132330                     : TTT-TGGT-CATC--TGCCAATA-TATGCGGTA-----TGC-A-TCGGGCAG--AAATCT-A---T--TGTATTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACTC-A-TGATAGC-GA-TA-TGCCAA--CAGCTTT-AGCGA-TATCACGAATCGTGTA-TCTG
gi|132331                     : TTT-TGCT-CATC--TGTCAATA-TATGCAGTA-----TGC-A-TCTGGCAG--AAATTT-T---T--TGTACTT--T-CAAA-ATACATGTACGCTTCAAAA--TGAAAT-GCACCC-A-TGATTGC-AA-TA-AGCCAA--CCGCTTT-GGCAA-TAACACAAATCAAGTA-TCTG
gi|132332                     : TTT-TGGT-CAGT--TGTCAATG-TATGCGGTA-----TCC-A-TCTGGCAG--AAATCC-T---T--CGTACTT--T-CAAA-A------TACGCTTCAAAA--TGAAAT-GCACCC-G-TGATAAC-GA-TA-TGTCAA--CAGCTTT-GGCAA-TATTACGAATCGTGTA-
gi|132333                     : TTT-TGGT-CATC--TGTCAATA-TATGCAGTA-----TAC-G-TCTGGCAG--TAATCT-T---T--TATAGTT--T-CAAA-A------TGCACTTCAAAA--TTAAAA-G-GCCC-A-CGATAAC-TA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACAAATCATGTA-TCTG
gi|132334                     : TTT-TGGT-TATT--TGTCAAAA-GATGTGGCA-----TCC-A-TCTGACAG--AAAACT-T---T--TGTACTT--T-CAAA-A------TACGCTTGAAAA--TGAAGT-GCACAC-G-CGATGGC-AA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACGAATTGAGTA-TCTG
gi|132335                     : TTG-TGGT-CATC------AATA-TATGCGGTA-----TCC-A-TCTGACAA--AAATCT-T---C--CGTACTT--T-CAAA-A------T--------------GAAAT-GCACCC---CGATAGC-GA-TA-TGCCAA--CAGCTTT-GGCAA-TATCACCAATCGTATA-TCTG
gi|132336                     : TTT-TGGT-CCCC--TGTCAATA-TCTGCGGTA-----TCC-A-TCGGACAG--AAATCT-T---T--CGTACTT--T-CAAA-A------TACGTTTCAAAA--TGAAGT-G
gi|132337                     :   T-TGGT-CATC--TGTCAATA-TATGTGGTAA----TGC-A-TCTG-CAGGAAAATCT-T---T--TGTACTT--TTCAAATA------TATGCTTCAAAA--TGAAAT-GCACCC-AACGAAAGC-GA-TT-TGCCAA--CAGCTTT-AGCAT-TATCACGAATCAAGTA-TCTG
gi|132338                     :   T-TGGTTCATC--TGTCAATA-TATGTGGTA-----TGC-ACTCT-GCAG--AAATCC-TTTGT--TGTACTT--T-CAAA-A------TAGGCCTTCAAA--TGACAT--CACCC-A-AGAAAGC-GATTT-TGCCAA--CAGC-TT-AGCAATTATCATGGATCGGCTA-TCT
gi|132339                     :   T-TGGT-CATCGCTGTCAATA-TATGTGGTAATGGGCGA-A-TCTGGCAG--GAATCTGT---TTGTGTACTTTGT-CAAA-AT-----TATGC-TCAAAA--TGAAATGGCA-CC-A-AGAAAGCGGA-TGTTGCCAATCCAGCTTTAGGC
gi|132340                     :       GT-AATC--TGTCAAGC-TATGCTTTA-----TTC-A-TCTAGCAT--AA-TCT-T---T--CGTACTT--T-CAAA--------TACGCTTCAAA---TGAAAT-GCAACC-G-CGATAGT-GA-TA-TGCCAA--CAGCTTT-GGCAA-TAT-ACGAATCATATA-
gi|132341                     :       GT-CATC--TATC--TA-TATGTTTTA-----TGCCA-TCTGGCAG--AAATCT-T---T---GTCTTT--C-CAAA-A------TAT-CTACAGAAATTGCAAT-GCACCCAA-CGATAG--GATTC-TGCCAA--AAACTT-----AACTATTACAGATCATGGAGTCTG
gi|132342                     :                    AATAATATGCTGTA-----TCC-A-TCTTGCAT--AAATCT-T---T--CGTACTT--T-CAAA-A------TA-GCCTGAAAA--TGAAAT-GCACCC-G-CGATAGC-AA-TA-TGCCAA--AAGCTTT-GGCAA-TATCACGAACAATGTA-TCTG
gi|132343                     :                                                                                      ------TACCTTTAAAAA--TAAAAT-ACATCT-G-CGATAGC-GA-TA-TGCCAA--CATCTTT-GGCAA-TATCATGAATCGTGTA-TATG