lowQualScore : 11111111111111111 1111 11111111 11 11 33333333333333333
lowQualScore : 0 7777 3 5 444 2 1 4 2 4 444 2 0 888888 2 33 44 2 66666666666666666 2 3333 1 33333333 2222 8 0 5555 999999 0 00 77 44 33 2 77 66 2 66666 33333333333333333 55 3 2 2 0 7
lowQualScore : . .... . . ... . . . . . ... . . ...... . .. .. . ................. . .... . ........ .... . . .... ...... . .. .. .. .. . .. .. . ..... ................. .. . . . . .
lowQualScore : 7 7777 6 8 000 9 5 3 9 0 777 9 9 222222 2 99 88 9 99999999999999999 9 5555 7 33333333 9999 0 7 7777 555555 5 00 55 66 77 7 99 33 7 22222 00000000000000000 22 6 9 9 8 1
consensus : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TTACCGCCC--TC-CTCTA-C--------G--------GC-T-CN-GAGACCTGGACA--------C-CA-TA-CAG----AC--GG--CATG--AAAAACTGCTCAAC-CACTT--C-CACCTC-AGN-TGCC-TTCG-A--AA----TCT---C-NTGCACATCC-GNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
Reference ( gi|129080 ) : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCC--TT-CTCTA-T--------G--------GC-T-CG-GAGACCTGGACA--------C-CA-TA-CAG----AC--GG--CATG--AAAAAGTGCTCAAT-CACTT--C-CATCTT-AGA-TGCC-TTCG-A--AA----TCT---C-ATGCTCATCC-GCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTCTGAAGCGG
gi|129081 : GGAGAGGAG----AGGAAATCAAGCT-G-GAG-ACAAAGCTGAAA-GTTTACCA-A-TC-AGTGGTCC------TTACCACCC--TT-CTCTA-T--------G--------GC-T-CA-GAGACCTGGGCA--------C-CA-TA-CAG----AC--GG--CATG--GAAAAGTTCTCAAT-CATTT--C-CATCTC-AGT-TGCC-TTCG-A--AA----CCT---C-CTGCACATCC-GCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTTTGAAGCGG
gi|129085 : GGAGAGGAG----AGGAA-TCAAGCTTG-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCC--TT-CTCTATT--------G--------GCTT-CG-GAGACCTGGA-A--------C-CA-TA-CAG----AC---G--CATGA-AAAAAGTGCTCAAT-CACTTTCC-CATCTC-GGA-TGCC-TTCG----AA----CCT---C-ATGAACA-CC-GCTGGCAGGA-CA-AAATCCCTGACACAGA-GTTCTGAAGCGG
gi|129082 : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCC--TC-ATCTA-T--------G--------GC-T-CT-GAGACCTGGACA--------C-CA-TA-CAG----AC--GG--CATG--AAAAACTGTTCAGT-CACTT--C-AATCTC-AGA-TGCC-TTCA-A--AA----CCT---C-CTGCACATCT-GATGGCAGGA-CA-AAATCACATCCACAGAGGTTTTGAAGCGG
gi|129083 : GGAAGGGGG----AAGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCC--TC-CTCCA-T--------G--------GC-T-CT-GAGACTTGGACA--------C-CA-TA-CAG----AC--GT--CATG--AAAAATTGTTCAGT-CACTT--C-AATCTC-AGA-TGCC-TTCA-A--AA----CCT---C-CTGCACATCT-GATGACAGGA-CA-CAGTCACTGTCACAAAGGTT-TGAAGCGG
gi|129084 : GGAGAGGAGCTAGAGGAA-TCAAGCT-G-GAG-ACAAAGTTCTCA-GTTTACCA-A-GC-AGTAGTCC------TTACCACCC--TC-CTCTA-T--------G--------GA-T-TT-GAGGCATGAACA--------C-CA-TA-CAA----AA--GA--TACG--GAAAACTGCTCAAA-TATTT--C-CACCTC-AGA-TGCC-TTCA-A--TA----TTT---C-CTTCATATCC-ACTGGCAAGA-CA-AAATCATAAACACAGAGGTTCTGAAG
gi|129087 : GGAGCGACG----AGGAC-TCAGCCT-C-ACT-ACCAAGGTGAAA-GTCTACCA-T-GC-AATGGTACATGTAATTACCATCC--TT-CTATA-T--------ACAAGAGAAGC-A-TG-AA----TGGACAGG------C-TC-TAGCAG----AT-------ATG--TCACATAGCTCAAC-TACTT--C-CATCTT-AGC-TGTC-CTCG-A--GA-----CT---C-ATTAGCATTA-AATGGCAGGA-TA-AAATCCCTGATACGGAGAT
gi|129086 : GGAGCAAAG----AAGAC-TCAACTT-G-ACC-ACCAAGCTGAAA-GTTTACCATATAC-AGTGATAC------TGACCACTC--TC-CTCTA-C--------G---------C-T-AGCGAAACCTGGACAGTCTGTATC-TA-CAGCAG----ACACGC--CA-G--ACAA----CTCGAC-CATTT--T-TACATG-AGT-TGCC-TCCACA--GAC---TTT---T-ATGC--ATCA-AGTGGAAGAA-CA-AAATTCCATACACGGAGATCCTTGAGCG
gi|129088 : GAGCGAAG----AGGAC-TCA-GCT-T-GATCACCAAGTTGAAA-GTTTACCA-T-GC-AGTGGTAC------TGA-CGCTC--TC-CTCTA-C--------GATA-----GC------GAAACCTGGACA--------G-TC-TA-CAG----CA--GA--CACG--CTAAACAACTCAAC-CACTT--T-CACATG-AGT-TGCC-TCC
gi|129089 : AGGGA----AGGGA-CCACCAC-A-GAG-ACAAAGATCAAG-ATGTACCG-G-GT-TGTTGTTC------TCATTGCAT--TG-CTCTA-C--------G--------GC-TGTG-GA-ACCTGGACA--------G-TC-TA-CCA----GC--GT--CATGCCAGGAA--GCTGAAC-CACTT--C-CACACC-ACC-TGCC-TCAG-A--AAACT-TCT---C-G-G--CATCA-GATGGCAAGA-CA-GGATCCCAGACACTGAGGTcgagact
gi|129090 : GAA----AGGAA-GCATGCA-C-GCG-ACAAAGCTGAAG-ATATACAG-A-GC-CGTAGTCC------TCGCCGTCC--GC-CTATA-T--------G--------GT-T-GT-GAGACATGGACC--------C-TG-TA-TCG----TC--GGCACATC--AACA---GCTGGAG-CAATT--C-CACAAC-AGGTTGTC-TCT-----AC----TTTACGC-ATGAACATAC-GTTGGCAGGA-CA-GAGTCACCAACCAAGAAGT
gi|129091 : AG----AGGAA-TCA-GCT-GCGAG-ACAAA-TTGAAAAGTCTACCA-A-GCGAGTAGTCC------T-ACCACCC--TT-CTCTA-T--------G--------GC-T-CG-GAGACCTGGACA--------CGCATTA-C-G----AC--GG--CAT---AAAAACT-CTCAATCCACTT--CTCATCTTCAGA-TGCCATTCG-A--AA-----CT---CGATGCACATCCAGCT-GCAGGACCA-AAATCCC-GACATAGA-GTTCTGAAGCGG
gi|129092 : -G-GAG-AGGAA-TT-AAA-GTCAACCA-G-GC-AATAATCC------TCACCACTC--TC-CTCTA-TTGTTATATG--------GC-T-CC-GAGGCTTAGACA--------C-CA-T--------------------G--AAAAACTGTTCAAT-CAATT--C-CATCTC-AGA-TGCC-TTCT-G--AG----TCT---C-CTTCATATCC-GCTGGCAGGA-CA-AAATCTCCGACACGGAGGTCCTAAAGTGG
gi|129093 : -GAG-ACAAAGATCAAG-GTGTACTG-G-GC-TGTTG---------TTATCACTCCATTGCTCTA-C--------G--------GC-T-GT-GAAACCTGGACA--------G-TT-TA-CCA----GC--GT--CACGCCAGGAA--GCTGAAC-CACTT--C-CACACC-ACC-TGCC-TCAG-A--AAACT-TCT---C-G-G--CATCA-AGTGGCAAGA-CA-GGATTCCAGACACTGAGGT
gi|129094 : AG-ACAAAGATCAAG-GTGTACCG-G-GC-TGTTGTTC------TCACAGCAT--TG-CTCTA-C--------G--------GC-T-GT-GAAACCTGGACA--------G-TC-TACCAGTGTCAC--GC--CAGG--AAA-----CTGAAC-CATTT--C-CACACC-ACC-TGCC--TCA-A--AAAACTTCT---C-G-G--CATCA-AGTGGCAAGA-CA-
gi|129095 : CA--------C-CA-TA-CAG----AC--GG--CATG--AAAAACTG-------CATTT--C-CATCTC-TGA-TGCC-CTCG-GATAA----CCT---C-CTCCACATCT-GCTGGCAGGA-CACGAATCACTGACACAGAGGTTCTGAAGTGG
Alignments
lowQualScore : 1111111111 1111 1111
lowQualScore : 7777 3 4 3 2 2 0 3 2 1 5555 2 0 777777 2 2 0 3333333333 2 777 2 66666 66 2 33 0000 0 5555 2 0000 33 33 33 2 2 0 2 1 2 0 33 9 444 33 33 1 1 2 2 0 3
lowQualScore : .... . . . . . . . . . .... . . ...... . . . .......... . ... . ..... .. . .. .... . .... . .... .. .. .. . . . . . . . .. . ... .. .. . . . . . .
lowQualScore : 1111 3 6 1 9 7 8 3 7 0 5555 7 2 777777 5 3 3 0000000000 7 444 7 77777 99 5 00 3333 1 3333 4 6666 44 22 44 5 5 4 5 0 5 3 77 5 777 77 88 5 0 7 7 1 8
consensus : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TCACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CG-TA----CAG----ACGGCACG--AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AANCT---C-CTNCGCATCCGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
Reference ( family-948 ) : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TTACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CA-TA----CAG----ACGGCATG--AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AATCT---C-NTGCACATCCGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
gi|129080 : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCCTTCTCTA-T--------GGC-TCG-GAGAC-C-----TGGACA--C-CA-TA----CAG----ACGGCATG--AAAAAGTGCTCAA-TCACTT--C-CA-TCTTA-GATGCC-TTCGA--AATCT---C-ATGCTCATCCGCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTCTGAAGCGG
gi|129081 : GGAGAGGAG----AGGAAATCAAGCT-G-GAG-ACAAAGCTGAAA-GTTTACCA-A-TC-AGTGGTCC------TTACCACCCTTCTCTA-T--------GGC-TCA-GAGAC-C-----TGGGCA--C-CA-TA----CAG----ACGGCATG--GAAAAGTTCTCAA-TCATTT--C-CA-TCTCA-GTTGCC-TTCGA--AACCT---C-CTGCACATCCGCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTTTGAAGCGG
gi|129082 : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCCTCATCTA-T--------GGC-TCT-GAGAC-C-----TGGACA--C-CA-TA----CAG----ACGGCATG--AAAAACTGTTCAG-TCACTT--C-AA-TCTCA-GATGCC-TTCAA--AACCT---C-CTGCACATCTGATGGCAGGA-CA-AAATCACATCCACAGAGGTTTTGAAGCGG
gi|129083 : GGAAGGGGG----AAGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCCTCCTCCA-T--------GGC-TCT-GAGAC-T-----TGGACA--C-CA-TA----CAG----ACGTCATG--AAAAATTGTTCAG-TCACTT--C-AA-TCTCA-GATGCC-TTCAA--AACCT---C-CTGCACATCTGATGACAGGA-CA-CAGTCACTGTCACAAAGGTT-TGAAGCGG
gi|129084 : GGAGAGGAGCTAGAGGAA-TCAAGCT-G-GAG-ACAAAGTTCTCA-GTTTACCA-A-GC-AGTAGTCC------TTACCACCCTCCTCTA-T--------GGA-TTT-GAGGC-A-----TGAACA--C-CA-TA----CAA----AAGATACG--GAAAACTGCTCAA-ATATTT--C-CA-CCTCA-GATGCC-TTCAA--TATTT---C-CTTCATATCCACTGGCAAGA-CA-AAATCATAAACACAGAGGTTCTGAAG
gi|129085 : GGAGAGGAG----AGGAA-TCAAGCTTG-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCCTTCTCTATT--------GGCTTCG-GAGAC-C-----TGGA-A--C-CA-TA----CAG----AC-GCATGA-AAAAAGTGCTCAA-TCACTTTCC-CA-TCTCG-GATGCC-TTCG---AACCT---C-ATGAACA-CCGCTGGCAGGA-CA-AAATCCCTGACACAGA-GTTCTGAAGCGG
gi|129086 : GGAGCAAAG----AAGAC-TCAACTT-G-ACC-ACCAAGCTGAAA-GTTTACCATATAC-AGTGATAC------TGACCACTCTCCTCTA-C--------G-C-TAGCGAAAC-C-----TGGACAGTC-TG-TATCTACAG----CAGACACG--CCAGACAACTCGA-CCATTT--T-TA-CATGA-GTTGCC-TCCAC--AGACT---T-TTATGCATCAAGTGGAAGAA-CA-AAATTCCATACACGGAGATCCTTGAGCG
gi|129087 : GGAGCGACG----AGGAC-TCAGCCT-C-ACT-ACCAAGGTGAAA-GTCTACCA-T-GC-AATGGTACATGTAATTACCATCCTTCTATA-T--------A----CAAGAGAAGCATGAATGGACAGGC-TC-TAG---CAG----AT---ATG--TCACATAGCTCAA-CTACTT--C-CA-TCTTA-GCTGTC-CTCGA--GA-CT---C-ATTAGCATTAAATGGCAGGA-TA-AAATCCCTGATACGGAGAT
gi|129088 : GAGCGAAG----AGGAC-TCA-GCT-T-GATCACCAAGTTGAAA-GTTTACCA-T-GC-AGTGGTAC------TGAC-GCTCTCCTCTA-C--------GAT-AGC-GAAAC-C-----TGGACA--G-TC-TA----CAG----CAGACACG--CTAAACAACTCAA-CCACTT--T-CA-CATGA-GTTGCC-TCC
gi|129089 : AGGGA----AGGGA-CCACCAC-A-GAG-ACAAAGATCAAG-ATGTACCG-G-GT-TGTTGTTC------TCATTGCATTGCTCTA-C--------GGC-TGT-GGAAC-C-----TGGACA--G-TC-TA----CCA----GCGTCATGCCAGGAA--GCTGAA-CCACTT--C-CA-CACCA-CCTGCC-TCAGA--AAACT---T-CTCGGCATCAGATGGCAAGA-CA-GGATCCCAGACACTGAGGTcgagact
gi|129090 : GAA----AGGAA-GCATGCA-C-GCG-ACAAAGCTGAAG-ATATACAG-A-GC-CGTAGTCC------TCGCCGTCCGCCTATA-T--------GGT-TGT-GAGAC-A-----TGGACC--C-TG-TA----TCG----TCGGCAC---ATCAACAGCTGGA-GCAATT--C-CA-CAACAGGTTGTC-TCT----ACTTTACGC-ATGAACATACGTTGGCAGGA-CA-GAGTCACCAACCAAGAAGT
gi|129091 : AG----AGGAA-TCA-GCT-GCGAG-ACAAA-TTGAAAAGTCTACCA-A-GCGAGTAGTCC------T-ACCACCCTTCTCTA-T--------GGC-TCG-GAGAC-C-----TGGACA--CGCATTA----C-G----ACGGCAT---AAAAACT-CTCAATCCACTT--CTCATCTTCA-GATGCCATTCGA--AA-CT---CGATGCACATCCAGCTGCAGGACCA-AAATCCC-GACATAGA-GTTCTGAAGCGG
gi|129092 : -G-GAG-AGGAA-TT-AAA-GTCAACCA-G-GC-AATAATCC------TCACCACTCTCCTCTA-TTGTTATATGGC-TCC-GAGGC-T-----TAGACA--C-CA-T-------------------G--AAAAACTGTTCAA-TCAATT--C-CA-TCTCA-GATGCC-TTCTG--AGTCT---C-CTTCATATCCGCTGGCAGGA-CA-AAATCTCCGACACGGAGGTCCTAAAGTGG
gi|129093 : -GAG-ACAAAGATCAAG-GTGTACTG-G-GC-TGTTGTTA------TCACTCCATTGCTCTA-C--------GGC-TGT-GAAAC-C-----TGGACA--G-TT-TA----CCA----GCGTCACGCCAGGAA--GCTGAA-CCACTT--C-CA-CACCA-CCTGCC-TCAGA--AAACT---T-CTCGGCATCAAGTGGCAAGA-CA-GGATTCCAGACACTGAGGT
gi|129094 : AG-ACAAAGATCAAG-GTGTACCG-G-GC-TGTTGTTC------TCACAGCATTGCTCTA-C--------GGC-TGT-GAAAC-C-----TGGACA--G-TC-TAC---CAGTGTCACGCCAGG----AAACTG---AA-CCATTT--C-CA-CACCA-CCTGCC-TCAAA--AAACT---T-CTCGGCATCAAGTGGCAAGA-CA-
gi|129095 : CA--C-CA-TA----CAG----ACGGCATG--AAAAACTG-------CATTT--C-CA-TCTCT-GATGCC-CTCGGATAACCT---C-CTCCACATCTGCTGGCAGGA-CACGAATCACTGACACAGAGGTTCTGAAGTGG
Alignments
lowQualScore : 1111111111 1111111 111
lowQualScore : 7777 3 4 3 2 2 0 3 2 1 5555 2 0 777777 4 2 0 3333333333 2 777 2 66666 1111111 7777 1 33 2 333 33 33 33 2 2 0 2 1 2 0 33 6 2 1 0 444 6666 1 2 2 0 3
lowQualScore : .... . . . . . . . . . .... . . ...... . . . .......... . ... . ..... ....... .... . .. . ... .. .. .. . . . . . . . .. . . . . ... .... . . . . .
lowQualScore : 1111 3 6 1 9 7 8 3 7 0 5555 7 2 777777 1 3 3 0000000000 7 444 7 77777 9999999 8888 6 44 4 888 99 22 44 5 5 4 5 0 5 3 77 2 7 0 2 777 2222 0 7 7 1 8
consensus : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TCACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CG-TA----CAGAC--GGCACG---AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AANCTC-CTNCGCAT---C---CGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
Reference ( family-948 ) : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TCACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CG-TA----CAGAC--GGCACG---AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AANCTC-CTNCGCAT---C---CGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
gi|129080 : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCCTTCTCTA-T--------GGC-TCG-GAGAC-C-----TGGACA--C-CA-TA----CAGAC--GGCATG---AAAAAGTGCTCAA-TCACTT--C-CA-TCTTA-GATGCC-TTCGA--AATCTC-ATGCTCAT---C---CGCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTCTGAAGCGG
gi|129081 : GGAGAGGAG----AGGAAATCAAGCT-G-GAG-ACAAAGCTGAAA-GTTTACCA-A-TC-AGTGGTCC------TTACCACCCTTCTCTA-T--------GGC-TCA-GAGAC-C-----TGGGCA--C-CA-TA----CAGAC--GGCATG---GAAAAGTTCTCAA-TCATTT--C-CA-TCTCA-GTTGCC-TTCGA--AACCTC-CTGCACAT---C---CGCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTTTGAAGCGG
gi|129082 : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCCTCATCTA-T--------GGC-TCT-GAGAC-C-----TGGACA--C-CA-TA----CAGAC--GGCATG---AAAAACTGTTCAG-TCACTT--C-AA-TCTCA-GATGCC-TTCAA--AACCTC-CTGCACAT---C---TGATGGCAGGA-CA-AAATCACATCCACAGAGGTTTTGAAGCGG
gi|129083 : GGAAGGGGG----AAGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCCTCCTCCA-T--------GGC-TCT-GAGAC-T-----TGGACA--C-CA-TA----CAGAC--GTCATG---AAAAATTGTTCAG-TCACTT--C-AA-TCTCA-GATGCC-TTCAA--AACCTC-CTGCACAT---C---TGATGACAGGA-CA-CAGTCACTGTCACAAAGGTT-TGAAGCGG
gi|129084 : GGAGAGGAGCTAGAGGAA-TCAAGCT-G-GAG-ACAAAGTTCTCA-GTTTACCA-A-GC-AGTAGTCC------TTACCACCCTCCTCTA-T--------GGA-TTT-GAGGC-A-----TGAACA--C-CA-TA----CAAAA--GATACG---GAAAACTGCTCAA-ATATTT--C-CA-CCTCA-GATGCC-TTCAA--TATTTC-CTTCATAT---C---CACTGGCAAGA-CA-AAATCATAAACACAGAGGTTCTGAAG
gi|129085 : GGAGAGGAG----AGGAA-TCAAGCTTG-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCCTTCTCTATT--------GGCTTCG-GAGAC-C-----TGGA-A--C-CA-TA----CAGAC---GCATGA--AAAAAGTGCTCAA-TCACTTTCC-CA-TCTCG-GATGCC-TTCG---AACCTC-ATGAACA----C---CGCTGGCAGGA-CA-AAATCCCTGACACAGA-GTTCTGAAGCGG
gi|129086 : GGAGCAAAG----AAGAC-TCAACTT-G-ACC-ACCAAGCTGAAA-GTTTACCATATAC-AGTGATAC------TGACCACTCTCCTCTA-C--------G-C-TAGCGAAAC-C-----TGGACAGTC-TG-TATCTACAGCA--GACACG---CCAGACAACTCGA-CCATTT--T-TA-CATGA-GTTGCC-TCCAC--AGACTT-TTATGCAT---C---AAGTGGAAGAA-CA-AAATTCCATACACGGAGATCCTTGAGCG
gi|129087 : GGAGCGACG----AGGAC-TCAGCCT-C-ACT-ACCAAGGTGAAA-GTCTACCA-T-GC-AATGGTACATGTAATTACCATCCTTCTATA-T--------A----CAAGAGAAGCATGAATGGACAGGC-TC-TAG---CAGATATGTCACA---TA-----GCTCAA-CTACTT--C-CA-TCTTA-GCTGTC-CTCGA--GA-CTC-ATTAGCAT---T---AAATGGCAGGA-TA-AAATCCCTGATACGGAGAT
gi|129088 : GAGCGAAG----AGGAC-TCA-GCT-T-GATCACCAAGTTGAAA-GTTTACCA-T-GC-AGTGGTAC------TGAC-GCTCTCCTCTA-C--------GAT-AGC-GAAAC-C-----TGGACA--G-TC-TA----CAGCA--GACACG---CTAAACAACTCAA-CCACTT--T-CA-CATGA-GTTGCC-TCC
gi|129089 : AGGGA----AGGGA-CCACCAC-A-GAG-ACAAAGATCAAG-ATGTACCG-G-GT-TGTTGTTC------TCATTGCATTGCTCTA-C--------GGC-TGT-GGAAC-C-----TGGACA--G-TC-TA----CCAGC--GTCATGCC-AGGAA--GCTGAA-CCACTT--C-CA-CACCA-CCTGCC-TCAGA--AAACTT-CTCGGCAT---C---AGATGGCAAGA-CA-GGATCCCAGACACTGAGGTcgagact
gi|129090 : GAA----AGGAA-GCATGCA-C-GCG-ACAAAGCTGAAG-ATATACAG-A-GC-CGTAGTCC------TCGCCGTCCGCCTATA-T--------GGT-TGT-GAGAC-A-----TGGACC--C-TG-TA----TCGTC--GGCAC----ATCAACAGCTGGA-GCAATT--C-CA-CAACAGGTTGTC-TCT------ACT--TTACGCATGAACATACGTTGGCAGGA-CA-GAGTCACCAACCAAGAAGT
gi|129091 : AG----AGGAA-TCA-GCT-GCGAG-ACAAA-TTGAAAAGTCTACCA-A-GCGAGTAGTCC------T-ACCACCCTTCTCTA-T--------GGC-TCG-GAGAC-C-----TGGACA--CGCATTA----C-GAC--GGCAT----AAAAACT-CTCAATCCACTT--CTCATCTTCA-GATGCCATTCGA--AA-CTCGATGCACAT---C---CAGCTGCAGGACCA-AAATCCC-GACATAGA-GTTCTGAAGCGG
gi|129092 : -G-GAG-AGGAA-TT-AAA-GTCAACCA-G-GC-AATAATCC------TCACCACTCTCCTCTA-TTGTTATATGGC-TCC-GAGGC-T-----TAGACA--C-CA-T-----------------G---AAAAACTGTTCAA-TCAATT--C-CA-TCTCA-GATGCC-TTCTG--AGTCTC-CTTCATAT---C---CGCTGGCAGGA-CA-AAATCTCCGACACGGAGGTCCTAAAGTGG
gi|129093 : -GAG-ACAAAGATCAAG-GTGTACTG-G-GC-TGTTGTTA------TCACTCCATTGCTCTA-C--------GGC-TGT-GAAAC-C-----TGGACA--G-TT-TA----CCAGC--GTCACGCC-AGGAA--GCTGAA-CCACTT--C-CA-CACCA-CCTGCC-TCAGA--AAACTT-CTCGGCAT---C---AAGTGGCAAGA-CA-GGATTCCAGACACTGAGGT
gi|129094 : AG-ACAAAGATCAAG-GTGTACCG-G-GC-TGTTGTTC------TCACAGCATTGCTCTA-C--------GGC-TGT-GAAAC-C-----TGGACA--G-TC-TA----CCAGT--GTCACGCCAGGAAACTG---AA-CCATTT--C-CA-CACCA-CCTGCC-TCAAA--AAACTT-CTCGGCAT---C---AAGTGGCAAGA-CA-
gi|129095 : CA--C-CA-TA----CAGAC--GGCATG---AAAAACTG-------CATTT--C-CA-TCTCT-GATGCC-CTCGGATAACCTC-CTCCACAT---C---TGCTGGCAGGA-CACGAATCACTGACACAGAGGTTCTGAAGTGG
Alignments
lowQualScore : 1111111111 1111111 111
lowQualScore : 7777 3 4 3 2 2 0 3 2 1 5555 2 0 777777 4 2 0 3333333333 2 777 2 66666 1111111 7777 1 33 2 333 33 33 33 2 2 0 2 1 2 0 33 6 2 1 0 444 6666 1 2 2 0 3
lowQualScore : .... . . . . . . . . . .... . . ...... . . . .......... . ... . ..... ....... .... . .. . ... .. .. .. . . . . . . . .. . . . . ... .... . . . . .
lowQualScore : 1111 3 6 1 9 7 8 3 7 0 5555 7 2 777777 1 3 3 0000000000 7 444 7 77777 9999999 8888 6 44 4 888 99 22 44 5 5 4 5 0 5 3 77 2 7 0 2 777 2222 0 7 7 1 8
consensus : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TCACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CG-TA----CAGAC--GGCACG---AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AANCTC-CTNCGCAT---C---CGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
Reference ( family-948 ) : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TCACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CG-TA----CAGAC--GGCACG---AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AANCTC-CTNCGCAT---C---CGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
gi|129080 : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCCTTCTCTA-T--------GGC-TCG-GAGAC-C-----TGGACA--C-CA-TA----CAGAC--GGCATG---AAAAAGTGCTCAA-TCACTT--C-CA-TCTTA-GATGCC-TTCGA--AATCTC-ATGCTCAT---C---CGCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTCTGAAGCGG
gi|129081 : GGAGAGGAG----AGGAAATCAAGCT-G-GAG-ACAAAGCTGAAA-GTTTACCA-A-TC-AGTGGTCC------TTACCACCCTTCTCTA-T--------GGC-TCA-GAGAC-C-----TGGGCA--C-CA-TA----CAGAC--GGCATG---GAAAAGTTCTCAA-TCATTT--C-CA-TCTCA-GTTGCC-TTCGA--AACCTC-CTGCACAT---C---CGCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTTTGAAGCGG
gi|129082 : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCCTCATCTA-T--------GGC-TCT-GAGAC-C-----TGGACA--C-CA-TA----CAGAC--GGCATG---AAAAACTGTTCAG-TCACTT--C-AA-TCTCA-GATGCC-TTCAA--AACCTC-CTGCACAT---C---TGATGGCAGGA-CA-AAATCACATCCACAGAGGTTTTGAAGCGG
gi|129083 : GGAAGGGGG----AAGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCCTCCTCCA-T--------GGC-TCT-GAGAC-T-----TGGACA--C-CA-TA----CAGAC--GTCATG---AAAAATTGTTCAG-TCACTT--C-AA-TCTCA-GATGCC-TTCAA--AACCTC-CTGCACAT---C---TGATGACAGGA-CA-CAGTCACTGTCACAAAGGTT-TGAAGCGG
gi|129084 : GGAGAGGAGCTAGAGGAA-TCAAGCT-G-GAG-ACAAAGTTCTCA-GTTTACCA-A-GC-AGTAGTCC------TTACCACCCTCCTCTA-T--------GGA-TTT-GAGGC-A-----TGAACA--C-CA-TA----CAAAA--GATACG---GAAAACTGCTCAA-ATATTT--C-CA-CCTCA-GATGCC-TTCAA--TATTTC-CTTCATAT---C---CACTGGCAAGA-CA-AAATCATAAACACAGAGGTTCTGAAG
gi|129085 : GGAGAGGAG----AGGAA-TCAAGCTTG-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCCTTCTCTATT--------GGCTTCG-GAGAC-C-----TGGA-A--C-CA-TA----CAGAC---GCATGA--AAAAAGTGCTCAA-TCACTTTCC-CA-TCTCG-GATGCC-TTCG---AACCTC-ATGAACA----C---CGCTGGCAGGA-CA-AAATCCCTGACACAGA-GTTCTGAAGCGG
gi|129086 : GGAGCAAAG----AAGAC-TCAACTT-G-ACC-ACCAAGCTGAAA-GTTTACCATATAC-AGTGATAC------TGACCACTCTCCTCTA-C--------G-C-TAGCGAAAC-C-----TGGACAGTC-TG-TATCTACAGCA--GACACG---CCAGACAACTCGA-CCATTT--T-TA-CATGA-GTTGCC-TCCAC--AGACTT-TTATGCAT---C---AAGTGGAAGAA-CA-AAATTCCATACACGGAGATCCTTGAGCG
gi|129087 : GGAGCGACG----AGGAC-TCAGCCT-C-ACT-ACCAAGGTGAAA-GTCTACCA-T-GC-AATGGTACATGTAATTACCATCCTTCTATA-T--------A----CAAGAGAAGCATGAATGGACAGGC-TC-TAG---CAGATATGTCACA---TA-----GCTCAA-CTACTT--C-CA-TCTTA-GCTGTC-CTCGA--GA-CTC-ATTAGCAT---T---AAATGGCAGGA-TA-AAATCCCTGATACGGAGAT
gi|129088 : GAGCGAAG----AGGAC-TCA-GCT-T-GATCACCAAGTTGAAA-GTTTACCA-T-GC-AGTGGTAC------TGAC-GCTCTCCTCTA-C--------GAT-AGC-GAAAC-C-----TGGACA--G-TC-TA----CAGCA--GACACG---CTAAACAACTCAA-CCACTT--T-CA-CATGA-GTTGCC-TCC
gi|129089 : AGGGA----AGGGA-CCACCAC-A-GAG-ACAAAGATCAAG-ATGTACCG-G-GT-TGTTGTTC------TCATTGCATTGCTCTA-C--------GGC-TGT-GGAAC-C-----TGGACA--G-TC-TA----CCAGC--GTCATGCC-AGGAA--GCTGAA-CCACTT--C-CA-CACCA-CCTGCC-TCAGA--AAACTT-CTCGGCAT---C---AGATGGCAAGA-CA-GGATCCCAGACACTGAGGTcgagact
gi|129090 : GAA----AGGAA-GCATGCA-C-GCG-ACAAAGCTGAAG-ATATACAG-A-GC-CGTAGTCC------TCGCCGTCCGCCTATA-T--------GGT-TGT-GAGAC-A-----TGGACC--C-TG-TA----TCGTC--GGCAC----ATCAACAGCTGGA-GCAATT--C-CA-CAACAGGTTGTC-TCT------ACT--TTACGCATGAACATACGTTGGCAGGA-CA-GAGTCACCAACCAAGAAGT
gi|129091 : AG----AGGAA-TCA-GCT-GCGAG-ACAAA-TTGAAAAGTCTACCA-A-GCGAGTAGTCC------T-ACCACCCTTCTCTA-T--------GGC-TCG-GAGAC-C-----TGGACA--CGCATTA----C-GAC--GGCAT----AAAAACT-CTCAATCCACTT--CTCATCTTCA-GATGCCATTCGA--AA-CTCGATGCACAT---C---CAGCTGCAGGACCA-AAATCCC-GACATAGA-GTTCTGAAGCGG
gi|129092 : -G-GAG-AGGAA-TT-AAA-GTCAACCA-G-GC-AATAATCC------TCACCACTCTCCTCTA-TTGTTATATGGC-TCC-GAGGC-T-----TAGACA--C-CA-T-----------------G---AAAAACTGTTCAA-TCAATT--C-CA-TCTCA-GATGCC-TTCTG--AGTCTC-CTTCATAT---C---CGCTGGCAGGA-CA-AAATCTCCGACACGGAGGTCCTAAAGTGG
gi|129093 : -GAG-ACAAAGATCAAG-GTGTACTG-G-GC-TGTTGTTA------TCACTCCATTGCTCTA-C--------GGC-TGT-GAAAC-C-----TGGACA--G-TT-TA----CCAGC--GTCACGCC-AGGAA--GCTGAA-CCACTT--C-CA-CACCA-CCTGCC-TCAGA--AAACTT-CTCGGCAT---C---AAGTGGCAAGA-CA-GGATTCCAGACACTGAGGT
gi|129094 : AG-ACAAAGATCAAG-GTGTACCG-G-GC-TGTTGTTC------TCACAGCATTGCTCTA-C--------GGC-TGT-GAAAC-C-----TGGACA--G-TC-TA----CCAGT--GTCACGCCAGGAAACTG---AA-CCATTT--C-CA-CACCA-CCTGCC-TCAAA--AAACTT-CTCGGCAT---C---AAGTGGCAAGA-CA-
gi|129095 : CA--C-CA-TA----CAGAC--GGCATG---AAAAACTG-------CATTT--C-CA-TCTCT-GATGCC-CTCGGATAACCTC-CTCCACAT---C---TGCTGGCAGGA-CACGAATCACTGACACAGAGGTTCTGAAGTGG
blockSeqs : CTAG A A T C C G A T ATAT G ATGTAA T A TTGTTATAT T AGC G ATGAA GTCTG TCTA A AT G CCA GT TC TC T T G T A AT C G G GAA ATAC C C C T
blockSeqs : . . A . . . C . T AA . . T A TT . CAA . . GGCTC G A . G CC CT T . . . . A . . C . G . C A . . A
blockSeqs : . . A . . . C . T AA . . T A T . CA . . CGCAT . A . T CC TT T . . . . A . . C . G . T A . . T
blockSeqs : . . A . . . C . T AA . . T A T . CT . . CCA . A . A A CT T . . . . A . . T . T . T C . . A
blockSeqs : . . A . . . G . C AA . . T A T . CT . . CCA . A . G . GT A . . . . A . . C . G . C C . . T
blockSeqs : . . A . . . G . T AA . . G A T . TT . . CCA . A . A . CA T . . . . T . . A . A . C G . . A
blockSeqs : . . G . . . G . C AT . . T A C . CG . . CCA . A . T . CA C . . . . C . . A . T . A A . . T
blockSeqs : . . C . . . G . T AT . . G G T . GC . . CCA . A . A . CA C . . . . T . . A . C . A A . . A
blockSeqs : . . T . . . C . G GG . . C G C . GT . . GTC . C . T . CT C . . . . C . . T . A . A T . . C
blockSeqs : . . . . . . G . A GA . . C G C . GT . . GTC . C . G . CT C . . . . T . . A . G . C G . . C
blockSeqs : . . . . . . G . C AA . . C A T . CG . . CTG . C . G . CT G . . . . A . . A . T . C C . . A
blockSeqs : . . . C . C AG . . C A T . CC . . CCA . C . T . CT T . . . . A . . C . C . A G . . T
blockSeqs : . . C . G GG . . C C C . GT . . GTT . A . T . . C . . . . C . . . . C . A G . . .
blockSeqs : . . . G GG . . . G C . GT . . GTC . . . G . . C . . . . C . . . . C . T C . .
blockSeqs : CCA . . . . . . . . . . . A .
blockSeqCons :
originalCons : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TCACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CG-TA----CAGAC--GGCACG---AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AANCTC-CTNCGCAT---C---CGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
finalCons : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TCACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CG-TA----CAGAC--GGCACG---AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AANCTC-CTNCGCAT---C---CGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
Alignments
lowQualScore : 1111111111 1111111 111
lowQualScore : 7777 3 4 3 2 2 0 3 2 1 5555 2 0 777777 4 2 0 3333333333 2 777 2 66666 1111111 7777 1 33 2 333 33 33 33 2 2 0 2 1 2 0 33 6 2 1 0 444 6666 1 2 2 0 3
lowQualScore : .... . . . . . . . . . .... . . ...... . . . .......... . ... . ..... ....... .... . .. . ... .. .. .. . . . . . . . .. . . . . ... .... . . . . .
lowQualScore : 1111 3 6 1 9 7 8 3 7 0 5555 7 2 777777 1 3 3 0000000000 7 444 7 77777 9999999 8888 6 44 4 888 99 22 44 5 5 4 5 0 5 3 77 2 7 0 2 777 2222 0 7 7 1 8
consensus : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TCACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CG-TA----CAGAC--GGCACG---AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AANCTC-CTNCGCAT---C---CGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
Reference ( family-948 ) : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTNTACCG-A-GC-AGTAGTCC------TCACCGCCCTCCTCTA-C--------GGC-TCN-GAGAC-C-----TGGACA--C-CG-TA----CAGAC--GGCACG---AAAAACTGCTCAA-CCACTT--C-CA-CCTCA-GNTGCC-TTCGA--AANCTC-CTNCGCAT---C---CGNTGGCAGGA-CA-AAATCCCNGACACAGAGGTTCTGAAGCGG
gi|129080 : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCCTTCTCTA-T--------GGC-TCG-GAGAC-C-----TGGACA--C-CA-TA----CAGAC--GGCATG---AAAAAGTGCTCAA-TCACTT--C-CA-TCTTA-GATGCC-TTCGA--AATCTC-ATGCTCAT---C---CGCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTCTGAAGCGG
gi|129081 : GGAGAGGAG----AGGAAATCAAGCT-G-GAG-ACAAAGCTGAAA-GTTTACCA-A-TC-AGTGGTCC------TTACCACCCTTCTCTA-T--------GGC-TCA-GAGAC-C-----TGGGCA--C-CA-TA----CAGAC--GGCATG---GAAAAGTTCTCAA-TCATTT--C-CA-TCTCA-GTTGCC-TTCGA--AACCTC-CTGCACAT---C---CGCTGGCAGGA-CA-AAATCCCTGACACAGAGGTTTTGAAGCGG
gi|129082 : GGAGAGGAG----AGGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCCTCATCTA-T--------GGC-TCT-GAGAC-C-----TGGACA--C-CA-TA----CAGAC--GGCATG---AAAAACTGTTCAG-TCACTT--C-AA-TCTCA-GATGCC-TTCAA--AACCTC-CTGCACAT---C---TGATGGCAGGA-CA-AAATCACATCCACAGAGGTTTTGAAGCGG
gi|129083 : GGAAGGGGG----AAGAA-TCAAGCT-G-GAG-ACAAAGTTCGAA-GTTTACCA-A-GC-AGTAGTCC------TTACCAGCCTCCTCCA-T--------GGC-TCT-GAGAC-T-----TGGACA--C-CA-TA----CAGAC--GTCATG---AAAAATTGTTCAG-TCACTT--C-AA-TCTCA-GATGCC-TTCAA--AACCTC-CTGCACAT---C---TGATGACAGGA-CA-CAGTCACTGTCACAAAGGTT-TGAAGCGG
gi|129084 : GGAGAGGAGCTAGAGGAA-TCAAGCT-G-GAG-ACAAAGTTCTCA-GTTTACCA-A-GC-AGTAGTCC------TTACCACCCTCCTCTA-T--------GGA-TTT-GAGGC-A-----TGAACA--C-CA-TA----CAAAA--GATACG---GAAAACTGCTCAA-ATATTT--C-CA-CCTCA-GATGCC-TTCAA--TATTTC-CTTCATAT---C---CACTGGCAAGA-CA-AAATCATAAACACAGAGGTTCTGAAG
gi|129085 : GGAGAGGAG----AGGAA-TCAAGCTTG-GAG-ACAAAGTTGAAA-GTCTACCA-A-GC-AGTAGTCC------TTACCACCCTTCTCTATT--------GGCTTCG-GAGAC-C-----TGGA-A--C-CA-TA----CAGAC---GCATGA--AAAAAGTGCTCAA-TCACTTTCC-CA-TCTCG-GATGCC-TTCG---AACCTC-ATGAACA----C---CGCTGGCAGGA-CA-AAATCCCTGACACAGA-GTTCTGAAGCGG
gi|129086 : GGAGCAAAG----AAGAC-TCAACTT-G-ACC-ACCAAGCTGAAA-GTTTACCATATAC-AGTGATAC------TGACCACTCTCCTCTA-C--------G-C-TAGCGAAAC-C-----TGGACAGTC-TG-TATCTACAGCA--GACACG---CCAGACAACTCGA-CCATTT--T-TA-CATGA-GTTGCC-TCCAC--AGACTT-TTATGCAT---C---AAGTGGAAGAA-CA-AAATTCCATACACGGAGATCCTTGAGCG
gi|129087 : GGAGCGACG----AGGAC-TCAGCCT-C-ACT-ACCAAGGTGAAA-GTCTACCA-T-GC-AATGGTACATGTAATTACCATCCTTCTATA-T--------A----CAAGAGAAGCATGAATGGACAGGC-TC-TAG---CAGATATGTCACA---TA-----GCTCAA-CTACTT--C-CA-TCTTA-GCTGTC-CTCGA--GA-CTC-ATTAGCAT---T---AAATGGCAGGA-TA-AAATCCCTGATACGGAGAT
gi|129088 : GAGCGAAG----AGGAC-TCA-GCT-T-GATCACCAAGTTGAAA-GTTTACCA-T-GC-AGTGGTAC------TGAC-GCTCTCCTCTA-C--------GAT-AGC-GAAAC-C-----TGGACA--G-TC-TA----CAGCA--GACACG---CTAAACAACTCAA-CCACTT--T-CA-CATGA-GTTGCC-TCC
gi|129089 : AGGGA----AGGGA-CCACCAC-A-GAG-ACAAAGATCAAG-ATGTACCG-G-GT-TGTTGTTC------TCATTGCATTGCTCTA-C--------GGC-TGT-GGAAC-C-----TGGACA--G-TC-TA----CCAGC--GTCATGCC-AGGAA--GCTGAA-CCACTT--C-CA-CACCA-CCTGCC-TCAGA--AAACTT-CTCGGCAT---C---AGATGGCAAGA-CA-GGATCCCAGACACTGAGGTcgagact
gi|129090 : GAA----AGGAA-GCATGCA-C-GCG-ACAAAGCTGAAG-ATATACAG-A-GC-CGTAGTCC------TCGCCGTCCGCCTATA-T--------GGT-TGT-GAGAC-A-----TGGACC--C-TG-TA----TCGTC--GGCAC----ATCAACAGCTGGA-GCAATT--C-CA-CAACAGGTTGTC-TCT------ACT--TTACGCATGAACATACGTTGGCAGGA-CA-GAGTCACCAACCAAGAAGT
gi|129091 : AG----AGGAA-TCA-GCT-GCGAG-ACAAA-TTGAAAAGTCTACCA-A-GCGAGTAGTCC------T-ACCACCCTTCTCTA-T--------GGC-TCG-GAGAC-C-----TGGACA--CGCATTA----C-GAC--GGCAT----AAAAACT-CTCAATCCACTT--CTCATCTTCA-GATGCCATTCGA--AA-CTCGATGCACAT---C---CAGCTGCAGGACCA-AAATCCC-GACATAGA-GTTCTGAAGCGG
gi|129092 : -G-GAG-AGGAA-TT-AAA-GTCAACCA-G-GC-AATAATCC------TCACCACTCTCCTCTA-TTGTTATATGGC-TCC-GAGGC-T-----TAGACA--C-CA-T-----------------G---AAAAACTGTTCAA-TCAATT--C-CA-TCTCA-GATGCC-TTCTG--AGTCTC-CTTCATAT---C---CGCTGGCAGGA-CA-AAATCTCCGACACGGAGGTCCTAAAGTGG
gi|129093 : -GAG-ACAAAGATCAAG-GTGTACTG-G-GC-TGTTGTTA------TCACTCCATTGCTCTA-C--------GGC-TGT-GAAAC-C-----TGGACA--G-TT-TA----CCAGC--GTCACGCC-AGGAA--GCTGAA-CCACTT--C-CA-CACCA-CCTGCC-TCAGA--AAACTT-CTCGGCAT---C---AAGTGGCAAGA-CA-GGATTCCAGACACTGAGGT
gi|129094 : AG-ACAAAGATCAAG-GTGTACCG-G-GC-TGTTGTTC------TCACAGCATTGCTCTA-C--------GGC-TGT-GAAAC-C-----TGGACA--G-TC-TA----CCAGT--GTCACGCCAGGAAACTG---AA-CCATTT--C-CA-CACCA-CCTGCC-TCAAA--AAACTT-CTCGGCAT---C---AAGTGGCAAGA-CA-
gi|129095 : CA--C-CA-TA----CAGAC--GGCATG---AAAAACTG-------CATTT--C-CA-TCTCT-GATGCC-CTCGGATAACCTC-CTCCACAT---C---TGCTGGCAGGA-CACGAATCACTGACACAGAGGTTCTGAAGTGG