lowQualScore : 11 1 333333333333333333 1111111111 222222222222222222 111
lowQualScore : 3 3 3 77 9 3 3 222222222222222222 44 44 44 3 77 6666 5 2 7777777777 77 2 2 2 333333333333333333 2 33 55 2 5 2 5 2 2 5 2 2 888 77 33 2 2 2 2 2 5 2 888 2 33 555 2 5 99999 33 444 88 999 2
lowQualScore : . . . .. . . . .................. .. .. .. . .. .... . . .......... .. . . . .................. . .. .. . . . . . . . . . ... .. .. . . . . . . . ... . .. ... . . ..... .. ... .. ... .
lowQualScore : 2 3 3 11 0 5 1 111111111111111111 22 22 22 1 33 5555 3 7 2222222222 77 7 7 7 000000000000000000 5 44 99 5 0 5 0 5 5 0 5 5 111 99 44 5 5 5 5 5 0 5 666 5 66 222 5 0 44444 44 444 44 444 5
consensus : TTTATAAATT-TGT-A--GTAGTGTTAATATATA-TGTC---------------GTGT--GCA--A--C-TT--GTT----CG-TG-T-A--CGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T-------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-TG--T-GA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
Reference ( gi|84818 ) : TTTATAAATT-TGT-A--GTATTGTTAATATATA-TGTT---------------GTGT--ACA--A--C-TT--GTT----CG-TG-T-A--TGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T-------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-TT--T-AA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
gi|84820 : TTT-TAAATT-TGT-A--GTAGTGTTAATATATA-TGTT----------------TGT--ACA--A--C-TT--GTT----CG-TG-T-GATTGT---AAATTCA--TT-CGAAC-GTA-TATTG------CA-T-------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-TTCC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-TT--T-AA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTG----GT-GTCTG-AAGGA-T---T-TG--A---GGTGAA--TT---CTGT-CAAAAAG
gi|84819 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGC----------------GTG---GCA--A--C-TT--GTT----CG-TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG------AA-T-------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-C-TA-A-TGGATCG-TG-TG--T-GA--TGG-TG-A-TACA-AC-AAAG-AA-GT-A---TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84821 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC---------------A-GT--GCA--A--C-TT--GTT----CG-TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG-------A-T-------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AA-TTCCATGT-AA--CATA-A-TGGATCG-TG-TG--T-GA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-ATG-AAGGA-T---A-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84822 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC---------------A-GT--GCA--A--C-TT--GTT----CG-TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG------AA-T-------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC--AATTCCATGT--AA-C-TA-A-TGGATCG-TG-TG--T-GA--TGGATG-A-TACA-AC---AG-AA-GT-A---TC-TTGTGT-CTGT-G-ATG-AAGGA-T---A-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84825 : TTTATAA-TT-TGT-ATAGTAGTG--AATATATA--GTC---------------ATGT--GCA--A--C-TT--GTT----CG-TG-TGA--CAT---AAATTCAG-TT-TG-AC-GTA-TATTG------AA-T-------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGTAAAA-CATA-A-TGGATCG-TG-TG--T-GA--AGGATGAA-TACA-AC-AAAG-AA-GT-ACT-TC-TTGTGT-CTGT-G-CTG-AAGGAGTA--T-TG--A--GGGTGAA--TT---CTGT-CAAAAGG
gi|84824 : TTT-TAAATT-TGT-A--GTAGTGTTAATA-ATA-TGTT----------------TGT--ACA-----C-TT--GTT----CGATG-T-GATTGTT--AAATTCA--TT-CGAAC-GTA-TATTG------CA-A-------CT-TGAAC-GTTT-AGTGGAA-CCAGTTG--CATT-CC-AAATTCCATGTAAAA-CATA-A-T-GATCG-TG-TT--T-AA--TGGATG-ATTACA-AC-AAAGAAA-GTGA-T-TC-TTGTG----GT-GTCTG-AAGGA-T---TGTG--AATGGGTGAA--TTG--CTGT-CAAAAAG
gi|84827 : TTTATAA--T-TGT-AA-GTAGTGTAAGTATATACTGTC---------------A-GT--GCA--A--C-TTA-GTT----CGCTG-T-A--CAT---AAATTCAG-TT-CGAACCGTA-TATTG------AA-T-------AT-TGAAC-TATTTAGTGGAACCCAGTTG--CA-TACC-AAGTTCCATGT--AA-CATATA-TGGATCG-TG-TTGAT-GA--TGGATG-A-TACA-AC-A----AA-GT-A---TC-TTGTGT-CTGT-G-ATGAAAGGA-T---A-TG--A--AGGCGAAC-TT---CTGT-CAAAAAG
gi|84823 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTCATGTGCAACTTGTTCGTGT--ACATAA--A-TTCAGTTTGAACG-TA-T-A--T-T---GANNNNNN-NN-NNNNN-NNN-NNNNN------NN-NNAATATAAT-TGAAC-GTT--AGTGGAACCCAGTTG--CA-T-CC-AAA-TCCATGT-AAA-CATA-A-TGGATCG-TGATT--T-GA--TGGATG-A-TACA-AC--AAG-AA-GT-A-TATCTTTGTGT-CTGT-G-CTG-AAGGA-----T-TG--A---GGTGAA--TT---CTGT-CAAAAAG
gi|84828 : AATT-TGT-G--GTATTGTTAATACATA-TGTT---------------GTGT--ACA--A--C-TT--TTT----CG-TG-T-A--CAT---AAATTCAA-TT-TGAAC-GTA-TATTG------CA-T-------AT-TGAAC-GTTTTAGTGGAACCCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-TG--T-GA--TGGATG-A-CACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-A-CTG-AAGGA-T---T-TC--A--AGGTGAC--TA---CTGC-CAGGAAG
gi|84829 : AATTGTGTCG--GTATTGTTAATACATA-TGTT---------------GTGT--ACA--A--C-TT--TTT----CG-TGGT-A--CAT---AAATTCAA-TT--GAAC-GTAGTATTG------CA-TT------AT-TGAAC-GTTTTAGTGGAACCCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-TG--T-GAATTGGATG-A-CAC--AC-AAAG-AACGT---T-TC-TTGTGG-CT-T-A-CTG-AAGGT-T---T-CA--A----GTGGA--CTA--CTGC-CAGGAAG
gi|84826 : AATT-TGT-ATAGTAGTG--AATATATA--GTCC--------------ATGT--GCA--A--C-TT--GTT----CG--G-TGA--CAT---AAATTCAGGTT-TGAAC-GTA-TATTG------GAAT-------AT-TGAAC-GTT--AGTGGAACCCAGTTG--CA-T-CCCAAATTCCATGT-AAAACATA-A-TGGATCG-TG-TG--TGAA--GGGATG-A-TACA-AC-AAAG-AA-GT-A-T-T--TTGTGTCCTGT-G-CTG-AAGGAGTCTAT-TG--AT-GGGTGAATGTT---CTGTGCAAA
gi|84830 : tttAATT-TGT-GTGGTATTGTTAATACATA-TGTT---------------GTGTGTACA--AACCATT--TTT----CG-TG-TTA--CAT---AAATTCAA-TTATGAAC-GTA-TACTG------CA-TT------ATATGAACCGTTTAAGTGAA--CCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-ATTTGATCG-TG-TG--T-GA--TGGATG-A-CACATACAAAAG-AACGT---T-TC-TTGTGG-CTGTAA-CTG-AAGGG-T---TATC--A---AGTGGA--CTATACTGC-CAGGAAG
gi|84831 : TATATA-TATT---------------TTGT--ATG--A--C-TT--CTT----CA-CG-T-A--TATTGAAAATTCAA-TT-TGAAC-------------------------------------TTTTAGTGAAACCCAATTG--TA-T-TC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-TT--T-GA--TGGATG-A-TACA-AC-AAAG-AA-TT-A-T-TC-TTGTGT-CTGT-C-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-GAAAAGG
gi|84832 : atttgtgtg-TG-T-A--TG-----ACTTC---TT-C-AAC-GTA-TATTGAAAATTCA-T--------T-TGAAC--TTTTAGTGAAACCCAATTGA-TA-T-TC-AAATTC-ATGT-AAA-CATA-A-TGGATCG-TG-TT--T-GA--TGGATG-A-TACA-AC-AAAG-AA-TT-ATT-TC-TTGTGT-CTGT-C-CTG-AAGGA-T---T-GA--A--GGGTGAA--TT---CTGT-GAAAAGG
gi|84833 : gtggtatatatattt-TG-T-A--TG-----ACTTC---TT-C-AAC-GTA-TATTGAAAATTCA-T--------T-TGAAC---TTTAGTGAA--CCAATTGAATA-T-TC-AAATTC-ATGT-AAA-CATA-AATGGATCGGTG-TT--TGAA--TGGATG-A-TACA-AC-AAAG-AA-TT-A-T-TC-TTGTGT-CTGT-C-TTG-AAGGA-T---T-TGACA--GGGTGAAT-TT---CTGT-GAAAAGG
gi|84834 : gtggtatatatatttA-T-------AT--GAA---TTTCAGTGAAACCTAGCTG--CA-T-TC-AAATCCCTTGC-AAA-GTTG-G-TGGAACC-TG-CA--T-TC--TGAATG-A-CACC-AC-GAAT-TC-GT-A-C-CA-ATGTGC-CTGT-G-CTG-ATGGA-T---A-TG--A--AGGGGAA--TT---CTGC-GAAAGAG
Alignments
lowQualScore : 1111 1 11111111111111 111 2222222222222222222222 111
lowQualScore : 1 2 5555 3 2 888 555 33 2 66666666666666 111 2 5 66 666 66 2 2 2 4444444444444444444444 2 22 55 2 4 2 4 2 2 4 2 2 555 77 2 2 2 2 2 4 2 777 2 22 2 4 2 4 88888 33 333 77 888 2
lowQualScore : . . .... . . ... ... .. . .............. ... . . .. ... .. . . . ...................... . .. .. . . . . . . . . . ... .. . . . . . . . ... . .. . . . . ..... .. ... .. ... .
lowQualScore : 9 9 2222 8 9 444 000 99 9 88888888888888 999 5 0 99 999 66 5 5 5 2222222222222222222222 4 66 66 4 7 4 7 4 4 7 4 4 444 99 4 4 4 4 4 7 4 666 4 88 4 7 4 7 33333 22 000 99 888 4
consensus : TTTATAAATT-TGT-A--GTAGTGTTAATATATA-TGTC-GTGTGCA---AC--TT-G--------------TTCG---TG-T-A--CGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
Reference ( family-919 ) : TTTATAAATT-TGT-A--GTAGTGTTAATATATA-TGTC-GTGTGCA---AC--TT-G--------------TTCG---TG-T-A--CGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
gi|84818 : TTTATAAATT-TGT-A--GTATTGTTAATATATA-TGTT-GTGTACA---AC--TT-G--------------TTCG---TG-T-A--TGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--TTAA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
gi|84819 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TG-C-GTG-GCA---AC--TT-G--------------TTCG---TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG------AA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-C-TA-A-TGGATCG-TG-T--GTGA--TGG-TG-A-TACA-AC-AAAG-AA-GT-A---TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84820 : TTT-TAAATT-TGT-A--GTAGTGTTAATATATA-TGTT--TGTACA---AC--TT-G--------------TTCG---TG-T-GATTGT---AAATTCA--TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-TTCC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--TTAA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTG----GT-GTCTG-AAGGA-T---T-TG--A---GGTGAA--TT---CTGT-CAAAAAG
gi|84821 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC-A-GTGCA---AC--TT-G--------------TTCG---TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG-------A-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AA-TTCCATGT-AA--CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-ATG-AAGGA-T---A-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84822 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC-A-GTGCA---AC--TT-G--------------TTCG---TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG------AA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC--AATTCCATGT--AA-C-TA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC---AG-AA-GT-A---TC-TTGTGT-CTGT-G-ATG-AAGGA-T---A-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84823 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC-ATGTGCA---AC--TT-GTTCGTGTACATAAATTCAGTTTG-A-A--CGT---ATATTGAN-NN-NNNNN-NNN-NNNNN------NN-NNNNNNNAATATAAT-TGAAC-GTT--AGTGGAACCCAGTTG--CA-T-CC-AAA-TCCATGT-AAA-CATA-A-TGGATCG-TGAT--TTGA--TGGATG-A-TACA-AC--AAG-AA-GT-A-TATCTTTGTGT-CTGT-G-CTG-AAGGA-----T-TG--A---GGTGAA--TT---CTGT-CAAAAAG
gi|84824 : TTT-TAAATT-TGT-A--GTAGTGTTAATA-ATA-TGTT--TGTACA----C--TT-G--------------TTCGA--TG-T-GATTGTT--AAATTCA--TT-CGAAC-GTA-TATTG------CA-A------------CT-TGAAC-GTTT-AGTGGAA-CCAGTTG--CATT-CC-AAATTCCATGTAAAA-CATA-A-T-GATCG-TG-T--TTAA--TGGATG-ATTACA-AC-AAAGAAA-GTGA-T-TC-TTGTG----GT-GTCTG-AAGGA-T---TGTG--AATGGGTGAA--TTG--CTGT-CAAAAAG
gi|84825 : TTTATAA-TT-TGT-ATAGTAGTG--AATATATA--GTC-ATGTGCA---AC--TT-G--------------TTCG---TG-TGA--CAT---AAATTCAG-TT-TG-AC-GTA-TATTG------AA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGTAAAA-CATA-A-TGGATCG-TG-T--GTGA--AGGATGAA-TACA-AC-AAAG-AA-GT-ACT-TC-TTGTGT-CTGT-G-CTG-AAGGAGTA--T-TG--A--GGGTGAA--TT---CTGT-CAAAAGG
gi|84826 : AATT-TGT-ATAGTAGTG--AATATATA--GTCCATGTGCA---AC--TT-G--------------TTCGG--TG---A--CAT---AAATTCAGGTT-TGAAC-GTA-TATTG------GAAT------------AT-TGAAC-GTT--AGTGGAACCCAGTTG--CA-T-CCCAAATTCCATGT-AAAACATA-A-TGGATCG-TG-T--GTGAA-GGGATG-A-TACA-AC-AAAG-AA-GT-A-T-T--TTGTGTCCTGT-G-CTG-AAGGAGTCTAT-TG--AT-GGGTGAATGTT---CTGTGCAAA
gi|84827 : tttTTTATAA--T-TGT-AA-GTAGTGTAAGTATATACTGTC-A-GTGCA---AC--TTAG--------------TTCGC--TG-T-A--CAT---AAATTCAG-TT-CGAACCGTA-TATTG------AA-T------------AT-TGAAC-TATTTAGTGGAACCCAGTTG--CA-TACC-AAGTTCCATGT--AA-CATATA-TGGATCG-TG-TTGATGA--TGGATG-A-TACA-AC-A----AA-GT-A---TC-TTGTGT-CTGT-G-ATGAAAGGA-T---A-TG--A--AGGCGAAC-TT---CTGT-CAAAAAG
gi|84828 : AATT-TGT-G--GTATTGTTAATACATA-TGTT-GTGTACA---AC--TT-T--------------TTCG---TG-T-A--CAT---AAATTCAA-TT-TGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-CACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-A-CTG-AAGGA-T---T-TC--A--AGGTGAC--TA---CTGC-CAGGAAG
gi|84829 : AATTGTGTCG--GTATTGTTAATACATA-TGTT-GTGTACA---AC--TT-T--------------TTCG---TGGT-A--CAT---AAATTCAA-TT--GAAC-GTAGTATTG------CA-TT-----------AT-TGAAC-GTTTTAGTGGAACCCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGAATTGGATG-A-CAC--AC-AAAG-AACGT---T-TC-TTGTGG-CT-T-A-CTG-AAGGT-T---T-CA--A----GTGGA--CTA--CTGC-CAGGAAG
gi|84830 : AATT-TGT-GTGGTATTGTTAATACATA-TGTT-GTGTGTACAAACCATT-T--------------TTCG---TG-TTA--CAT---AAATTCAA-TTATGAAC-GTA-TACTG------CA-TT-----------ATATGAACCGTTTAAGTGAA--CCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-ATTTGATCG-TG-T--GTGA--TGGATG-A-CACATACAAAAG-AACGT---T-TC-TTGTGG-CTGTAA-CTG-AAGGG-T---TATC--A---AGTGGA--CTATACTGC-CAGGAAG
gi|84831 : ATT-TGT-------GTGT--ATATATA-TTTT-GTATG-----AC--TT-C--------------TTCA---CG-T-A--TATTGAAAATTCAA-TT-TGAAC------------------------------------------TTTTAGTGAAACCCAATTG--TA-T-TC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--TTGA--TGGATG-A-TACA-AC-AAAG-AA-TT-A-T-TC-TTGTGT-CTGT-C-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-GAAAAGG
gi|84832 : ---TG-T-A--TG-----ACTTC---TT-C-AAC-GTA-TATTGAAAATTCA-T-------------T-TGAAC--TTTTAGTGAAACCCAATTGA-TA-T-TC-AAATTC-ATGT-AAA-CATA-A-TGGATCG-TG-T--TTGA--TGGATG-A-TACA-AC-AAAG-AA-TT-ATT-TC-TTGTGT-CTGT-C-CTG-AAGGA-T---T-GA--A--GGGTGAA--TT---CTGT-GAAAAGG
gi|84833 : gtggtatatatattt---TG-T-A--TG-----ACTTC---TT-C-AAC-GTA-TATTGAAAATTCA-T-------------T-TGAAC---TTTAGTGAA--CCAATTGAATA-T-TC-AAATTC-ATGT-AAA-CATA-AATGGATCGGTG-T--TTGAA-TGGATG-A-TACA-AC-AAAG-AA-TT-A-T-TC-TTGTGT-CTGT-C-TTG-AAGGA-T---T-TGACA--GGGTGAAT-TT---CTGT-GAAAAGG
gi|84834 : gtggtatatatatttA-T------------AT--GAA---TTTCAGTGAAACCTAGCTG--CA-T-TC-AAATCCCTTGC-AAA-GTTG-G-TGGAACC-TG-C--ATTC--TGAATG-A-CACC-AC-GAAT-TC-GT-A-C-CA-ATGTGC-CTGT-G-CTG-ATGGA-T---A-TG--A--AGGGGAA--TT---CTGC-GAAAGAG
Alignments
lowQualScore : 1111 1 11111111111111 111 2222222222222222222222 111
lowQualScore : 1 2 5555 3 2 888 555 33 2 66666666666666 111 2 5 66 666 66 2 2 2 4444444444444444444444 2 22 55 2 4 2 4 2 2 4 2 2 555 77 2 2 2 2 2 4 2 777 2 22 2 4 2 4 88888 33 333 77 888 2
lowQualScore : . . .... . . ... ... .. . .............. ... . . .. ... .. . . . ...................... . .. .. . . . . . . . . . ... .. . . . . . . . ... . .. . . . . ..... .. ... .. ... .
lowQualScore : 9 9 2222 8 9 444 000 99 9 88888888888888 999 5 0 99 999 66 5 5 5 2222222222222222222222 4 66 66 4 7 4 7 4 4 7 4 4 444 99 4 4 4 4 4 7 4 666 4 88 4 7 4 7 33333 22 000 99 888 4
consensus : TTTATAAATT-TGT-A--GTAGTGTTAATATATA-TGTC-GTGTGCA---AC--TT-G--------------TTCG---TG-T-A--CGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
Reference ( family-919 ) : TTTATAAATT-TGT-A--GTAGTGTTAATATATA-TGTC-GTGTGCA---AC--TT-G--------------TTCG---TG-T-A--CGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
gi|84818 : TTTATAAATT-TGT-A--GTATTGTTAATATATA-TGTT-GTGTACA---AC--TT-G--------------TTCG---TG-T-A--TGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--TTAA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
gi|84819 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TG-C-GTG-GCA---AC--TT-G--------------TTCG---TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG------AA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-C-TA-A-TGGATCG-TG-T--GTGA--TGG-TG-A-TACA-AC-AAAG-AA-GT-A---TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84820 : TTT-TAAATT-TGT-A--GTAGTGTTAATATATA-TGTT--TGTACA---AC--TT-G--------------TTCG---TG-T-GATTGT---AAATTCA--TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-TTCC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--TTAA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTG----GT-GTCTG-AAGGA-T---T-TG--A---GGTGAA--TT---CTGT-CAAAAAG
gi|84821 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC-A-GTGCA---AC--TT-G--------------TTCG---TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG-------A-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AA-TTCCATGT-AA--CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-ATG-AAGGA-T---A-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84822 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC-A-GTGCA---AC--TT-G--------------TTCG---TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG------AA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC--AATTCCATGT--AA-C-TA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC---AG-AA-GT-A---TC-TTGTGT-CTGT-G-ATG-AAGGA-T---A-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84823 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC-ATGTGCA---AC--TT-GTTCGTGTACATAAATTCAGTTTG-A-A--CGT---ATATTGAN-NN-NNNNN-NNN-NNNNN------NN-NNNNNNNAATATAAT-TGAAC-GTT--AGTGGAACCCAGTTG--CA-T-CC-AAA-TCCATGT-AAA-CATA-A-TGGATCG-TGAT--TTGA--TGGATG-A-TACA-AC--AAG-AA-GT-A-TATCTTTGTGT-CTGT-G-CTG-AAGGA-----T-TG--A---GGTGAA--TT---CTGT-CAAAAAG
gi|84824 : TTT-TAAATT-TGT-A--GTAGTGTTAATA-ATA-TGTT--TGTACA----C--TT-G--------------TTCGA--TG-T-GATTGTT--AAATTCA--TT-CGAAC-GTA-TATTG------CA-A------------CT-TGAAC-GTTT-AGTGGAA-CCAGTTG--CATT-CC-AAATTCCATGTAAAA-CATA-A-T-GATCG-TG-T--TTAA--TGGATG-ATTACA-AC-AAAGAAA-GTGA-T-TC-TTGTG----GT-GTCTG-AAGGA-T---TGTG--AATGGGTGAA--TTG--CTGT-CAAAAAG
gi|84825 : TTTATAA-TT-TGT-ATAGTAGTG--AATATATA--GTC-ATGTGCA---AC--TT-G--------------TTCG---TG-TGA--CAT---AAATTCAG-TT-TG-AC-GTA-TATTG------AA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGTAAAA-CATA-A-TGGATCG-TG-T--GTGA--AGGATGAA-TACA-AC-AAAG-AA-GT-ACT-TC-TTGTGT-CTGT-G-CTG-AAGGAGTA--T-TG--A--GGGTGAA--TT---CTGT-CAAAAGG
gi|84826 : AATT-TGT-ATAGTAGTG--AATATATA--GTCCATGTGCA---AC--TT-G--------------TTCGG--TG---A--CAT---AAATTCAGGTT-TGAAC-GTA-TATTG------GAAT------------AT-TGAAC-GTT--AGTGGAACCCAGTTG--CA-T-CCCAAATTCCATGT-AAAACATA-A-TGGATCG-TG-T--GTGAA-GGGATG-A-TACA-AC-AAAG-AA-GT-A-T-T--TTGTGTCCTGT-G-CTG-AAGGAGTCTAT-TG--AT-GGGTGAATGTT---CTGTGCAAA
gi|84827 : tttTTTATAA--T-TGT-AA-GTAGTGTAAGTATATACTGTC-A-GTGCA---AC--TTAG--------------TTCGC--TG-T-A--CAT---AAATTCAG-TT-CGAACCGTA-TATTG------AA-T------------AT-TGAAC-TATTTAGTGGAACCCAGTTG--CA-TACC-AAGTTCCATGT--AA-CATATA-TGGATCG-TG-TTGATGA--TGGATG-A-TACA-AC-A----AA-GT-A---TC-TTGTGT-CTGT-G-ATGAAAGGA-T---A-TG--A--AGGCGAAC-TT---CTGT-CAAAAAG
gi|84828 : AATT-TGT-G--GTATTGTTAATACATA-TGTT-GTGTACA---AC--TT-T--------------TTCG---TG-T-A--CAT---AAATTCAA-TT-TGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-CACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-A-CTG-AAGGA-T---T-TC--A--AGGTGAC--TA---CTGC-CAGGAAG
gi|84829 : AATTGTGTCG--GTATTGTTAATACATA-TGTT-GTGTACA---AC--TT-T--------------TTCG---TGGT-A--CAT---AAATTCAA-TT--GAAC-GTAGTATTG------CA-TT-----------AT-TGAAC-GTTTTAGTGGAACCCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGAATTGGATG-A-CAC--AC-AAAG-AACGT---T-TC-TTGTGG-CT-T-A-CTG-AAGGT-T---T-CA--A----GTGGA--CTA--CTGC-CAGGAAG
gi|84830 : AATT-TGT-GTGGTATTGTTAATACATA-TGTT-GTGTGTACAAACCATT-T--------------TTCG---TG-TTA--CAT---AAATTCAA-TTATGAAC-GTA-TACTG------CA-TT-----------ATATGAACCGTTTAAGTGAA--CCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-ATTTGATCG-TG-T--GTGA--TGGATG-A-CACATACAAAAG-AACGT---T-TC-TTGTGG-CTGTAA-CTG-AAGGG-T---TATC--A---AGTGGA--CTATACTGC-CAGGAAG
gi|84831 : ATT-TGT-------GTGT--ATATATA-TTTT-GTATG-----AC--TT-C--------------TTCA---CG-T-A--TATTGAAAATTCAA-TT-TGAAC------------------------------------------TTTTAGTGAAACCCAATTG--TA-T-TC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--TTGA--TGGATG-A-TACA-AC-AAAG-AA-TT-A-T-TC-TTGTGT-CTGT-C-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-GAAAAGG
gi|84832 : ---TG-T-A--TG-----ACTTC---TT-C-AAC-GTA-TATTGAAAATTCA-T-------------T-TGAAC--TTTTAGTGAAACCCAATTGA-TA-T-TC-AAATTC-ATGT-AAA-CATA-A-TGGATCG-TG-T--TTGA--TGGATG-A-TACA-AC-AAAG-AA-TT-ATT-TC-TTGTGT-CTGT-C-CTG-AAGGA-T---T-GA--A--GGGTGAA--TT---CTGT-GAAAAGG
gi|84833 : gtggtatatatattt---TG-T-A--TG-----ACTTC---TT-C-AAC-GTA-TATTGAAAATTCA-T-------------T-TGAAC---TTTAGTGAA--CCAATTGAATA-T-TC-AAATTC-ATGT-AAA-CATA-AATGGATCGGTG-T--TTGAA-TGGATG-A-TACA-AC-AAAG-AA-TT-A-T-TC-TTGTGT-CTGT-C-TTG-AAGGA-T---T-TGACA--GGGTGAAT-TT---CTGT-GAAAAGG
gi|84834 : gtggtatatatatttA-T------------AT--GAA---TTTCAGTGAAACCTAGCTG--CA-T-TC-AAATCCCTTGC-AAA-GTTG-G-TGGAACC-TG-C--ATTC--TGAATG-A-CACC-AC-GAAT-TC-GT-A-C-CA-ATGTGC-CTGT-G-CTG-ATGGA-T---A-TG--A--AGGGGAA--TT---CTGC-GAAAGAG
blockSeqs : A G ATA T C CAT CAA CA A TTCGTGTACATAAA GTT G G AT TGA GG A C G NNNNNNNNNAATATA A CG AA T T C A A T T G A TGA AT A T T A A C G TA T TC A T A G CTAT AC ATG TG ATA G
blockSeqs : A . ATA T . GT . . . . A . T AT T G . . . AAAATTCAT . G A . A . A . . A . . G A . . . . . C . CT . T . T . G TG . TG C G .
blockSeqs : A . GTG A . AT . . . . G . . . . G . . . AAAATTCAT . G . . . . . . . . . . T A . . . . . . . TT . T . . . . AT . A T A .
blockSeqs : A . AA T . AT . . . . C . . . . G . . . GAAT . G . . . . . . . . . . G . . . . . . . . T . T . . . . TA . A . . .
blockSeqs : A . CG T . GT . . . . . . . . . N . . . CATT . G . . . . . . . . . . G . . . . . . . . T . T . . . . T . A . . .
blockSeqs : A . A T . GT . . . . . . . . . G . . . CATT . G . . . . . . . . . . T . . . . . . . . T . T . . . . T . G . . .
blockSeqs : . . A . . GT . . . . . . . . . G . . . AAT . G . . . . . . . . . . T . . . . . . . . T . T . . . . A . A . . .
blockSeqs : . . A . . GT . . . . . . . . . A . . . CAT . G . . . . . . . . . . G . . . . . . . . T . T . . . . A . A . . .
blockSeqs : . A . . T . . . . . . . . . A . . . AAT . G . . . . . . . . . . G . . . . . . . . T . G . . . . T . G . . .
blockSeqs : . A . . A . . . . . . . . . A . . . CAA . T . . . . . . . . . . G . . . . . . . . T . G . . . . A . G . . .
blockSeqs : . A . . A . . . . . . . . . A . . . AAT . G . . . . . . . . . . G . . . . . . . . T . T . . . . T . G . . .
blockSeqs : . G . . T . . . . . . . . . . . . . AAT . G . . . . . . . . . . G . . . . . . . . T . T . . . . T . A . . .
blockSeqs : . . . . A . . . . . . . . . . . . . CAT . . . . . . . . . . . . T . . . . . . . . C . T . . . . T . . . . .
blockSeqs : . . . . . . . . . AT . . . . . . . . . . . . T . . . . . . . . . . C . . . . T . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . T . . . . .
blockSeqs : . . . . . . . . . . . . A . . . . . . . . . . . . . . . A . . . . .
blockSeqCons :
originalCons : TTTATAAATT-TGT-A--GTAGTGTTAATATATA-TGTC-GTGTGCA---AC--TT-G--------------TTCG---TG-T-A--CGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
finalCons : TTTATAAATT-TGT-A--GTAGTGTTAATATATA-TGTC-GTGTGCA---AC--TT-G--------------TTCG---TG-T-A--CGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
Alignments
lowQualScore : 1111 1 11111111111111 111 2222222222222222222222 111
lowQualScore : 1 2 5555 3 2 888 555 33 2 66666666666666 111 2 5 66 666 66 2 2 2 4444444444444444444444 2 22 55 2 4 2 4 2 2 4 2 2 555 77 2 2 2 2 2 4 2 777 2 22 2 4 2 4 88888 33 333 77 888 2
lowQualScore : . . .... . . ... ... .. . .............. ... . . .. ... .. . . . ...................... . .. .. . . . . . . . . . ... .. . . . . . . . ... . .. . . . . ..... .. ... .. ... .
lowQualScore : 9 9 2222 8 9 444 000 99 9 88888888888888 999 5 0 99 999 66 5 5 5 2222222222222222222222 4 66 66 4 7 4 7 4 4 7 4 4 444 99 4 4 4 4 4 7 4 666 4 88 4 7 4 7 33333 22 000 99 888 4
consensus : TTTATAAATT-TGT-A--GTAGTGTTAATATATA-TGTC-GTGTGCA---AC--TT-G--------------TTCG---TG-T-A--CGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
Reference ( family-919 ) : TTTATAAATT-TGT-A--GTAGTGTTAATATATA-TGTC-GTGTGCA---AC--TT-G--------------TTCG---TG-T-A--CGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
gi|84818 : TTTATAAATT-TGT-A--GTATTGTTAATATATA-TGTT-GTGTACA---AC--TT-G--------------TTCG---TG-T-A--TGT---AAATTCAG-TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--TTAA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-CAAAAAG
gi|84819 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TG-C-GTG-GCA---AC--TT-G--------------TTCG---TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG------AA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGT-AAA-C-TA-A-TGGATCG-TG-T--GTGA--TGG-TG-A-TACA-AC-AAAG-AA-GT-A---TC-TTGTGT-CTGT-G-CTG-AAGGA-T---T-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84820 : TTT-TAAATT-TGT-A--GTAGTGTTAATATATA-TGTT--TGTACA---AC--TT-G--------------TTCG---TG-T-GATTGT---AAATTCA--TT-CGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-TTCC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--TTAA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTG----GT-GTCTG-AAGGA-T---T-TG--A---GGTGAA--TT---CTGT-CAAAAAG
gi|84821 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC-A-GTGCA---AC--TT-G--------------TTCG---TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG-------A-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AA-TTCCATGT-AA--CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-G-ATG-AAGGA-T---A-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84822 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC-A-GTGCA---AC--TT-G--------------TTCG---TG-T-A--CAT---AAATTCAG-TT-CGAAC-GTA-TATTG------AA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC--AATTCCATGT--AA-C-TA-A-TGGATCG-TG-T--GTGA--TGGATG-A-TACA-AC---AG-AA-GT-A---TC-TTGTGT-CTGT-G-ATG-AAGGA-T---A-TG--A--AGGCGAA--TT---CTGT-CAAAAAG
gi|84823 : TTTATAAATT-TGT-A--GTAGTGT-AATATATA-TGTC-ATGTGCA---AC--TT-GTTCGTGTACATAAATTCAGTTTG-A-A--CGT---ATATTGAN-NN-NNNNN-NNN-NNNNN------NN-NNNNNNNAATATAAT-TGAAC-GTT--AGTGGAACCCAGTTG--CA-T-CC-AAA-TCCATGT-AAA-CATA-A-TGGATCG-TGAT--TTGA--TGGATG-A-TACA-AC--AAG-AA-GT-A-TATCTTTGTGT-CTGT-G-CTG-AAGGA-----T-TG--A---GGTGAA--TT---CTGT-CAAAAAG
gi|84824 : TTT-TAAATT-TGT-A--GTAGTGTTAATA-ATA-TGTT--TGTACA----C--TT-G--------------TTCGA--TG-T-GATTGTT--AAATTCA--TT-CGAAC-GTA-TATTG------CA-A------------CT-TGAAC-GTTT-AGTGGAA-CCAGTTG--CATT-CC-AAATTCCATGTAAAA-CATA-A-T-GATCG-TG-T--TTAA--TGGATG-ATTACA-AC-AAAGAAA-GTGA-T-TC-TTGTG----GT-GTCTG-AAGGA-T---TGTG--AATGGGTGAA--TTG--CTGT-CAAAAAG
gi|84825 : TTTATAA-TT-TGT-ATAGTAGTG--AATATATA--GTC-ATGTGCA---AC--TT-G--------------TTCG---TG-TGA--CAT---AAATTCAG-TT-TG-AC-GTA-TATTG------AA-T------------AT-TGAAC-GTTTTAGTGGAACCCAGTTG--CA-T-CC-AAATTCCATGTAAAA-CATA-A-TGGATCG-TG-T--GTGA--AGGATGAA-TACA-AC-AAAG-AA-GT-ACT-TC-TTGTGT-CTGT-G-CTG-AAGGAGTA--T-TG--A--GGGTGAA--TT---CTGT-CAAAAGG
gi|84826 : AATT-TGT-ATAGTAGTG--AATATATA--GTCCATGTGCA---AC--TT-G--------------TTCGG--TG---A--CAT---AAATTCAGGTT-TGAAC-GTA-TATTG------GAAT------------AT-TGAAC-GTT--AGTGGAACCCAGTTG--CA-T-CCCAAATTCCATGT-AAAACATA-A-TGGATCG-TG-T--GTGAA-GGGATG-A-TACA-AC-AAAG-AA-GT-A-T-T--TTGTGTCCTGT-G-CTG-AAGGAGTCTAT-TG--AT-GGGTGAATGTT---CTGTGCAAA
gi|84827 : tttTTTATAA--T-TGT-AA-GTAGTGTAAGTATATACTGTC-A-GTGCA---AC--TTAG--------------TTCGC--TG-T-A--CAT---AAATTCAG-TT-CGAACCGTA-TATTG------AA-T------------AT-TGAAC-TATTTAGTGGAACCCAGTTG--CA-TACC-AAGTTCCATGT--AA-CATATA-TGGATCG-TG-TTGATGA--TGGATG-A-TACA-AC-A----AA-GT-A---TC-TTGTGT-CTGT-G-ATGAAAGGA-T---A-TG--A--AGGCGAAC-TT---CTGT-CAAAAAG
gi|84828 : AATT-TGT-G--GTATTGTTAATACATA-TGTT-GTGTACA---AC--TT-T--------------TTCG---TG-T-A--CAT---AAATTCAA-TT-TGAAC-GTA-TATTG------CA-T------------AT-TGAAC-GTTTTAGTGGAACCCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGA--TGGATG-A-CACA-AC-AAAG-AA-GT-A-T-TC-TTGTGT-CTGT-A-CTG-AAGGA-T---T-TC--A--AGGTGAC--TA---CTGC-CAGGAAG
gi|84829 : AATTGTGTCG--GTATTGTTAATACATA-TGTT-GTGTACA---AC--TT-T--------------TTCG---TGGT-A--CAT---AAATTCAA-TT--GAAC-GTAGTATTG------CA-TT-----------AT-TGAAC-GTTTTAGTGGAACCCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--GTGAATTGGATG-A-CAC--AC-AAAG-AACGT---T-TC-TTGTGG-CT-T-A-CTG-AAGGT-T---T-CA--A----GTGGA--CTA--CTGC-CAGGAAG
gi|84830 : AATT-TGT-GTGGTATTGTTAATACATA-TGTT-GTGTGTACAAACCATT-T--------------TTCG---TG-TTA--CAT---AAATTCAA-TTATGAAC-GTA-TACTG------CA-TT-----------ATATGAACCGTTTAAGTGAA--CCACTTG--CA-T-CC-AAATTCCATGT-AAA-CATA-ATTTGATCG-TG-T--GTGA--TGGATG-A-CACATACAAAAG-AACGT---T-TC-TTGTGG-CTGTAA-CTG-AAGGG-T---TATC--A---AGTGGA--CTATACTGC-CAGGAAG
gi|84831 : ATT-TGT-------GTGT--ATATATA-TTTT-GTATG-----AC--TT-C--------------TTCA---CG-T-A--TATTGAAAATTCAA-TT-TGAAC------------------------------------------TTTTAGTGAAACCCAATTG--TA-T-TC-AAATTCCATGT-AAA-CATA-A-TGGATCG-TG-T--TTGA--TGGATG-A-TACA-AC-AAAG-AA-TT-A-T-TC-TTGTGT-CTGT-C-CTG-AAGGA-T---T-TG--A--GGGTGAA--TT---CTGT-GAAAAGG
gi|84832 : ---TG-T-A--TG-----ACTTC---TT-C-AAC-GTA-TATTGAAAATTCA-T-------------T-TGAAC--TTTTAGTGAAACCCAATTGA-TA-T-TC-AAATTC-ATGT-AAA-CATA-A-TGGATCG-TG-T--TTGA--TGGATG-A-TACA-AC-AAAG-AA-TT-ATT-TC-TTGTGT-CTGT-C-CTG-AAGGA-T---T-GA--A--GGGTGAA--TT---CTGT-GAAAAGG
gi|84833 : gtggtatatatattt---TG-T-A--TG-----ACTTC---TT-C-AAC-GTA-TATTGAAAATTCA-T-------------T-TGAAC---TTTAGTGAA--CCAATTGAATA-T-TC-AAATTC-ATGT-AAA-CATA-AATGGATCGGTG-T--TTGAA-TGGATG-A-TACA-AC-AAAG-AA-TT-A-T-TC-TTGTGT-CTGT-C-TTG-AAGGA-T---T-TGACA--GGGTGAAT-TT---CTGT-GAAAAGG
gi|84834 : gtggtatatatatttA-T------------AT--GAA---TTTCAGTGAAACCTAGCTG--CA-T-TC-AAATCCCTTGC-AAA-GTTG-G-TGGAACC-TG-C--ATTC--TGAATG-A-CACC-AC-GAAT-TC-GT-A-C-CA-ATGTGC-CTGT-G-CTG-ATGGA-T---A-TG--A--AGGGGAA--TT---CTGC-GAAAGAG