lowQualScore : 00 000 0 2222 11111 0 0 0 0
lowQualScore : .. ... . .... ..... . . . .
lowQualScore : 88 777 4 1111 99999 4 4 4 4
consensus : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
Reference ( gi|107647 ) : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107638 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107688 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCGTACGCAGAACAAGCTCT
gi|107724 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107719 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107718 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACACAGAACAAGCTCT
gi|107717 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107715 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACACAGAACAAGCTCT
gi|107714 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-A-A-TCATACGCAGAACAAGCTCT
gi|107711 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107708 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107707 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107706 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107702 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAAAACAAGCTCT
gi|107699 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107677 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATATGCAGAACAAGCTCT
gi|107626 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107751 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGC
gi|107641 : AACTTGTT-TGTAA---GTGGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107667 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----T-T-G-A-TCATACGCAGAACAAGCTCT
gi|107651 : AACTTGTT-TGTAA---ATAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107649 : AACTTGTT-TGTAA---GTAGCCTGCTTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107648 : AACTTATC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107673 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCCTACGCAGAACAAGCTCT
gi|107744 : AACTTCTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107736 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-T-T-A-TCATACGCAGAACAAGCTCT
gi|107652 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-T-A-A-TCATACGCAGAACAAGCTCT
gi|107680 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAATCTCT
gi|107679 : AACTTGTT-TGTAA---GTAGCCTGCCTCCATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107674 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAACTC
gi|107632 : AACTTGTC-TGTAA---GTAGCCTACCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACATGCTCT
gi|107722 : AATTTGTT-TGCAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107710 : AGCTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107709 : AGCTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107678 : AACTTGTC-TGTA----GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATATGCAGAACAAGCTCT
gi|107697 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C-----AAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107696 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C-----AAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107630 : AACTTATT-TGTAA---GTAGCCTGTCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107624 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T---A-TCATACGCAGAACAAGCTCT
gi|107749 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAATAAGATCT
gi|107627 : AACTTGTT-TGTAA---GTAGCCTGTCTCGATT-A----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107748 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----ATAAA-----C-T-G-A-TCATACGCAGAACAAGCTTT
gi|107694 : AACTTGTCCTGTAA---GTAGCCTGCCTCGA-T-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107725 : AACTTGTT-TGTGA---GTAACCTACCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107734 : AACTTGTC-TGTAA---TTAGCCTGCCTCGATT-A----AAAAA-----C-T-G-A-TCACACGCAGAACAAGCTCT
gi|107732 : AACTTGTC-TGTAA---GTAGCTTGCCTCGAT--C----AAAAA-----C-T-G-A-TCGTACGCAGAACAAGCTCT
gi|107729 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATTAA----AAAAA-----C-T-G-A-TCGTACGCAGAACAAGCTCT
gi|107663 : AACTTGTC-TGTAG---GTAGCTTGCCTCGATT------AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107752 : AACTTGTT-TGTAATTAGTAGCCTGTCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107746 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATA-C----AAAAA-----C-T-G-A-TCATACGCAGAAAAAGCTCT
gi|107622 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----AAGAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107750 : AACTTGTT-TATGA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TAATACGCAGAACAAGCTCT
gi|107730 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C-----AAAA-----C-T-GAA-TCGTACGCAGAACAAGCTCT
gi|107625 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-T----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107726 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACA
gi|107695 : AACTTGTT-CGTAA---GTAGCCTGCTTCGATT-C-----AAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107659 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-T-T-A-TCATACGCAGAGCAAGCTCT
gi|107619 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-A----AAAAA-----C-T-G-A-TCATATGCAGAACAAGCTCT
gi|107676 : AACTTATT-TGTAA----TAGCCTGCCTCGATT-C----AAAAA-----C-C-G-A-TCATACGCAGAACAAGCTCT
gi|107698 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-T-A-A-TTATATGCAGAACAAGCTCT
gi|107683 : AACTTGTC-TGTAA---GTAGCTTGCCTCAA-T-C----AAAAA-----C-TGG-A-TCATACGCAGAACAAGCTCT
gi|107618 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT------AAAAA-----C-T-G-A-TCATACGCAGAACAAGCT
gi|107646 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----AAAAA-----C-T-G-A-TCCTACACAGAACAAGCTCT
gi|107633 : AACTTGTT-TGTAA---GTAGCCTGGCTCGATT-C----AAAAC-----T-T-G-A-TCATACGCAGGACAAGCTCT
gi|107747 : AACTTGTC-TATAA---GTAGCTTGCCTCGATT-A----AAAAG-----A-T-G-A-TCATACGCAGAACAAGCTCT
gi|107668 : AACTTGTT-TGTGA---GTAGCCTGTCTCGATT-A----AAAAA-----C-T-G-A-TCATACGCAGAACAAGGTCT
gi|107620 : AACTTATT-TGTCA---GTAGCCTGCCTCGACT-T----AAAAA-----C-T-G-A-TCGTACGCAGAACAAGCTCT
gi|107738 : AACTTGTT-TGTCA---GTAACTTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATATGCAGAGCAAGCTCT
gi|107737 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATC-C-----AAAA-----C-T-G-A-TCATACGTAGAAC-AGCTCT
gi|107636 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-C-----AAGA-----C-T-G-A-TCATACGCAGAACAAGGTCT
gi|107756 : AACTTCTT-TGTAA---GTAGCCTGCCTCGATT-T----AAAAAAACC-C-T-G-A-TCATACGCAGAACAAGTTCT
gi|107741 : AACTCGTT-TGTAA---ATAGCCTGCCTCGATT-A----AAAAA-----A-T-G-A-TCATACGCAGAATAAGCTCT
gi|107670 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----T-G-G-A-TCATACGTAGAACAAACTCT
gi|107654 : AACTTGCT-TGTTA---GTAGTCTGCCTCGATT-C----AAAAC-----C-T-A-A-TCATACGCAGAACAAGCTCT
gi|107628 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-T-AGTCATACTCAGAACAAGCTCT
gi|107675 : AACTTATT-TGTAA----TAGCCTGCCTCGATT-C----AAAA------C-C-G-A-TCATACGCAGAACAAGCTCT
gi|107629 : AACTTGTT-TGTCA---GTAGTCTGCCTCGATT-C----AAAAC-----A-T-G-A-TTATACGCAGAACAAGCTCT
gi|107687 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----CAAAA-----C-T-G-A-TCATACGCAGAACAGGTTTT
gi|107739 : AACTTGTT-TGTAA---GTAGCCTGTCTCGATT------AAAAATAAACC-T-G-A-TCATACGCAGAAGAAGCTCT
gi|107623 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-TTAAAAAAAA-----CCT-G-A-TCATACGCAGAACAAGCTCT
gi|107754 : AACTTATT-TGTAA---GTAGCCTGTCTCGATT-A----ATAAA-----C-T-G-A-TCATATTCAGAACAAGCTCT
gi|107634 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-T----AAAAT-----T-T-G-A-TCATACGCGGAACAAGCTTT
gi|107728 : AACTTATT-TGTCA---G-AGCCTGCCTCGATT-T----AAAAA-----C-T-G-A-TCATATGCAGAACAAGGTCT
gi|107753 : AACTTAT--TGTCA---GTAACCTGTCTCAGTT-T----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107727 : AGCTTATT-GGTAA---GTAGCCTGCCTCGATT-A----AAATA-----T-T-G-A-TCATATGCAGAACAAGCTCTc
gi|107621 : AACTTATT-TGTCA---GTAGCCCGCCTT-ATT-C----AAAAC-----T-T-G-A-TCATATGCAGAACATGCTCT
gi|107631 : AACTTATT-TGTCA---GCAGCTAGTCTCAATT-A----AAAAA-----T-T-G-A-TCATACTCAGAACATGCTCTc
gi|107635 : AACTTATT-TGTCA---GTAGCCCGCCTT-ATT-C----AAAAC-----T-T-G-A-TCATATGCAGAA-ATGCTCTc
gi|107682 : AACTCATT-TGTCA---GTAGCCTGTCTCAATT-A----AGAAA-----T-C-A-A-TCATGTGCAGAACATGCTCTc
gi|107653 : AACCTCTT-TGTCA---GTAGTCTGCCTCGATT-T----CAAAC-----T-C-A-A-TCATACGCAGAACATGCTTT
gi|107655 : AACTTATT-TGTCA---GTAGCTTGACTTGATT-A----AAAAA-----T-T-G-A-TCATATGCCGAATATGTTCTc
gi|107740 : AACTTATT-TGTCA---TTAACCTGCCAAGATT------AAAAA-----T-T-T-A-TCATACGCAGATCATGCTCTc
gi|107957 : ACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCTc
gi|107956 : ACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107954 : ACTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107951 : ACTTGTT-TGTAA---GTAGCCTGCCTCAATT-G----AAAAC-----C-T-G-A-TCATACACAGAACAAGCTCT
gi|107955 : ACTTGTT-TGTCA---GTAGCCTGCCTCAATT-T----AAAAA-----C-A-G-A-TCATACGCAGAACAAGCTCT
gi|107959 : ACTTGTT-TGTCA---ATAGCCTCTCTCGATG-T----AAAAA-----C-T-G-A-TCATACGCAGAACAAGCTCT
gi|107952 : ACTTATT-TGTCA---GTAGCTTGTCTCGATT-T----AAAAA-----T-T-G-A-TCATACGCAAAAC--GTTCT
gi|107980 : CTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T-G-A-TCATACGCAGAAC-AGCTCTctc
Alignments
lowQualScore : 0 000 0 2222 11111 0 0 0
lowQualScore : . ... . .... ..... . . .
lowQualScore : 4 777 4 1111 99999 4 8 4
consensus : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
Reference ( family-90 ) : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107618 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT------AAAAA-----C-TG-A-TCATACGCAGAACAAGCT
gi|107619 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TG-A-TCATATGCAGAACAAGCTCT
gi|107620 : AACTTATT-TGTCA---GTAGCCTGCCTCGACT-T----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107621 : AACTTATT-TGTCA---GTAGCCCGCCTT-ATT-C----AAAAC-----T-TG-A-TCATATGCAGAACATGCTCT
gi|107622 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----AAGAA-----C-TG-A-TCATACGCAGAACAAGCTCTc
gi|107623 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-TTAAAAAAAA-----CCTG-A-TCATACGCAGAACAAGCTCT
gi|107624 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T--A-TCATACGCAGAACAAGCTCT
gi|107625 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-T----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107626 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107627 : AACTTGTT-TGTAA---GTAGCCTGTCTCGATT-A----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107628 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TT-AGTCATACTCAGAACAAGCTCT
gi|107629 : AACTTGTT-TGTCA---GTAGTCTGCCTCGATT-C----AAAAC-----A-TG-A-TTATACGCAGAACAAGCTCT
gi|107630 : AACTTATT-TGTAA---GTAGCCTGTCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107631 : AACTTATT-TGTCA---GCAGCTAGTCTCAATT-A----AAAAA-----T-TG-A-TCATACTCAGAACATGCTCT
gi|107632 : AACTTGTC-TGTAA---GTAGCCTACCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACATGCTCTc
gi|107633 : AACTTGTT-TGTAA---GTAGCCTGGCTCGATT-C----AAAAC-----T-TG-A-TCATACGCAGGACAAGCTCT
gi|107634 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-T----AAAAT-----T-TG-A-TCATACGCGGAACAAGCTTT
gi|107635 : AACTTATT-TGTCA---GTAGCCCGCCTT-ATT-C----AAAAC-----T-TG-A-TCATATGCAGAA-ATGCTCT
gi|107636 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-C-----AAGA-----C-TG-A-TCATACGCAGAACAAGGTCTc
gi|107638 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107641 : AACTTGTT-TGTAA---GTGGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107646 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----AAAAA-----C-TG-A-TCCTACACAGAACAAGCTCT
gi|107647 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107648 : AACTTATC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107649 : AACTTGTT-TGTAA---GTAGCCTGCTTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107651 : AACTTGTT-TGTAA---ATAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107652 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-TA-A-TCATACGCAGAACAAGCTCT
gi|107653 : AACCTCTT-TGTCA---GTAGTCTGCCTCGATT-T----CAAAC-----T-CA-A-TCATACGCAGAACATGCTTT
gi|107654 : AACTTGCT-TGTTA---GTAGTCTGCCTCGATT-C----AAAAC-----C-TA-A-TCATACGCAGAACAAGCTCTc
gi|107655 : AACTTATT-TGTCA---GTAGCTTGACTTGATT-A----AAAAA-----T-TG-A-TCATATGCCGAATATGTTCT
gi|107659 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TT-A-TCATACGCAGAGCAAGCTCTc
gi|107663 : AACTTGTC-TGTAG---GTAGCTTGCCTCGATT------AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107667 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----T-TG-A-TCATACGCAGAACAAGCTCT
gi|107668 : AACTTGTT-TGTGA---GTAGCCTGTCTCGATT-A----AAAAA-----C-TG-A-TCATACGCAGAACAAGGTCT
gi|107670 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----T-GG-A-TCATACGTAGAACAAACTCT
gi|107673 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCCTACGCAGAACAAGCTCT
gi|107674 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAACTC
gi|107675 : AACTTATT-TGTAA----TAGCCTGCCTCGATT-C----AAAA------C-CG-A-TCATACGCAGAACAAGCTCT
gi|107676 : AACTTATT-TGTAA----TAGCCTGCCTCGATT-C----AAAAA-----C-CG-A-TCATACGCAGAACAAGCTCT
gi|107677 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATATGCAGAACAAGCTCT
gi|107678 : AACTTGTC-TGTA----GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATATGCAGAACAAGCTCT
gi|107679 : AACTTGTT-TGTAA---GTAGCCTGCCTCCATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107680 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAATCTCT
gi|107682 : AACTCATT-TGTCA---GTAGCCTGTCTCAATT-A----AGAAA-----T-CA-A-TCATGTGCAGAACATGCTCT
gi|107683 : AACTTGTC-TGTAA---GTAGCTTGCCTCAAT--C----AAAAA-----C-TGGA-TCATACGCAGAACAAGCTCT
gi|107687 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----CAAAA-----C-TG-A-TCATACGCAGAACAGGTTTT
gi|107688 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107694 : AACTTGTCCTGTAA---GTAGCCTGCCTCGA-T-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107695 : AACTTGTT-CGTAA---GTAGCCTGCTTCGATT-C-----AAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107696 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C-----AAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107697 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C-----AAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107698 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TA-A-TTATATGCAGAACAAGCTCT
gi|107699 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107702 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAAAACAAGCTCT
gi|107706 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107707 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107708 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107709 : AGCTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107710 : AGCTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107711 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107714 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TA-A-TCATACGCAGAACAAGCTCT
gi|107715 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACACAGAACAAGCTCT
gi|107717 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107718 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACACAGAACAAGCTCT
gi|107719 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107722 : AATTTGTT-TGCAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107724 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107725 : AACTTGTT-TGTGA---GTAACCTACCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107726 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACA
gi|107727 : AGCTTATT-GGTAA---GTAGCCTGCCTCGATT-A----AAATA-----T-TG-A-TCATATGCAGAACAAGCTCT
gi|107728 : AACTTATT-TGTCA---G-AGCCTGCCTCGATT-T----AAAAA-----C-TG-A-TCATATGCAGAACAAGGTCT
gi|107729 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATTAA----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107730 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C-----AAAA-----C-TGAA-TCGTACGCAGAACAAGCTCT
gi|107732 : AACTTGTC-TGTAA---GTAGCTTGCCTCGAT--C----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107734 : AACTTGTC-TGTAA---TTAGCCTGCCTCGATT-A----AAAAA-----C-TG-A-TCACACGCAGAACAAGCTCT
gi|107736 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TT-A-TCATACGCAGAACAAGCTCT
gi|107737 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATC-C-----AAAA-----C-TG-A-TCATACGTAGAAC-AGCTCT
gi|107738 : AACTTGTT-TGTCA---GTAACTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATATGCAGAGCAAGCTCT
gi|107739 : AACTTGTT-TGTAA---GTAGCCTGTCTCGATT------AAAAATAAACC-TG-A-TCATACGCAGAAGAAGCTCT
gi|107740 : AACTTATT-TGTCA---TTAACCTGCCAAGATT------AAAAA-----T-TT-A-TCATACGCAGATCATGCTCT
gi|107741 : AACTCGTT-TGTAA---ATAGCCTGCCTCGATT-A----AAAAA-----A-TG-A-TCATACGCAGAATAAGCTCTc
gi|107744 : AACTTCTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107746 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATA-C----AAAAA-----C-TG-A-TCATACGCAGAAAAAGCTCT
gi|107747 : AACTTGTC-TATAA---GTAGCTTGCCTCGATT-A----AAAAG-----A-TG-A-TCATACGCAGAACAAGCTCT
gi|107748 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----ATAAA-----C-TG-A-TCATACGCAGAACAAGCTTT
gi|107749 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAATAAGATCT
gi|107750 : AACTTGTT-TATGA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TAATACGCAGAACAAGCTCT
gi|107751 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGC
gi|107752 : AACTTGTT-TGTAATTAGTAGCCTGTCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107753 : AACTTATT--GTCA---GTAACCTGTCTCAGTT-T----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107754 : AACTTATT-TGTAA---GTAGCCTGTCTCGATT-A----ATAAA-----C-TG-A-TCATATTCAGAACAAGCTCTc
gi|107756 : AACTTCTT-TGTAA---GTAGCCTGCCTCGATT-T----AAAAAAACC-C-TG-A-TCATACGCAGAACAAGTTCT
gi|107951 : ACTTGTT-TGTAA---GTAGCCTGCCTCAATT-G----AAAAC-----C-TG-A-TCATACACAGAACAAGCTCT
gi|107952 : ACTTATT-TGTCA---GTAGCTTGTCTCGATT-T----AAAAA-----T-TG-A-TCATACGCAAAAC--GTTCT
gi|107954 : ACTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCTctc
gi|107955 : ACTTGTT-TGTCA---GTAGCCTGCCTCAATT-T----AAAAA-----C-AG-A-TCATACGCAGAACAAGCTCT
gi|107956 : ACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107957 : ACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107959 : ACTTGTT-TGTCA---ATAGCCTCTCTCGATG-T----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107980 : CTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAAC-AGCTCT
Alignments
lowQualScore : 0 000 0 2222 11111 0 0 0
lowQualScore : . ... . .... ..... . . .
lowQualScore : 4 777 4 1111 99999 4 8 4
consensus : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
Reference ( family-90 ) : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107618 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT------AAAAA-----C-TG-A-TCATACGCAGAACAAGCT
gi|107619 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TG-A-TCATATGCAGAACAAGCTCT
gi|107620 : AACTTATT-TGTCA---GTAGCCTGCCTCGACT-T----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107621 : AACTTATT-TGTCA---GTAGCCCGCCTT-ATT-C----AAAAC-----T-TG-A-TCATATGCAGAACATGCTCT
gi|107622 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----AAGAA-----C-TG-A-TCATACGCAGAACAAGCTCTc
gi|107623 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-TTAAAAAAAA-----CCTG-A-TCATACGCAGAACAAGCTCT
gi|107624 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T--A-TCATACGCAGAACAAGCTCT
gi|107625 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-T----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107626 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107627 : AACTTGTT-TGTAA---GTAGCCTGTCTCGATT-A----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107628 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TT-AGTCATACTCAGAACAAGCTCT
gi|107629 : AACTTGTT-TGTCA---GTAGTCTGCCTCGATT-C----AAAAC-----A-TG-A-TTATACGCAGAACAAGCTCT
gi|107630 : AACTTATT-TGTAA---GTAGCCTGTCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107631 : AACTTATT-TGTCA---GCAGCTAGTCTCAATT-A----AAAAA-----T-TG-A-TCATACTCAGAACATGCTCT
gi|107632 : AACTTGTC-TGTAA---GTAGCCTACCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACATGCTCTc
gi|107633 : AACTTGTT-TGTAA---GTAGCCTGGCTCGATT-C----AAAAC-----T-TG-A-TCATACGCAGGACAAGCTCT
gi|107634 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-T----AAAAT-----T-TG-A-TCATACGCGGAACAAGCTTT
gi|107635 : AACTTATT-TGTCA---GTAGCCCGCCTT-ATT-C----AAAAC-----T-TG-A-TCATATGCAGAA-ATGCTCT
gi|107636 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-C-----AAGA-----C-TG-A-TCATACGCAGAACAAGGTCTc
gi|107638 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107641 : AACTTGTT-TGTAA---GTGGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107646 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----AAAAA-----C-TG-A-TCCTACACAGAACAAGCTCT
gi|107647 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107648 : AACTTATC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107649 : AACTTGTT-TGTAA---GTAGCCTGCTTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107651 : AACTTGTT-TGTAA---ATAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107652 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-TA-A-TCATACGCAGAACAAGCTCT
gi|107653 : AACCTCTT-TGTCA---GTAGTCTGCCTCGATT-T----CAAAC-----T-CA-A-TCATACGCAGAACATGCTTT
gi|107654 : AACTTGCT-TGTTA---GTAGTCTGCCTCGATT-C----AAAAC-----C-TA-A-TCATACGCAGAACAAGCTCTc
gi|107655 : AACTTATT-TGTCA---GTAGCTTGACTTGATT-A----AAAAA-----T-TG-A-TCATATGCCGAATATGTTCT
gi|107659 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TT-A-TCATACGCAGAGCAAGCTCTc
gi|107663 : AACTTGTC-TGTAG---GTAGCTTGCCTCGATT------AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107667 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----T-TG-A-TCATACGCAGAACAAGCTCT
gi|107668 : AACTTGTT-TGTGA---GTAGCCTGTCTCGATT-A----AAAAA-----C-TG-A-TCATACGCAGAACAAGGTCT
gi|107670 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----T-GG-A-TCATACGTAGAACAAACTCT
gi|107673 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCCTACGCAGAACAAGCTCT
gi|107674 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAACTC
gi|107675 : AACTTATT-TGTAA----TAGCCTGCCTCGATT-C----AAAA------C-CG-A-TCATACGCAGAACAAGCTCT
gi|107676 : AACTTATT-TGTAA----TAGCCTGCCTCGATT-C----AAAAA-----C-CG-A-TCATACGCAGAACAAGCTCT
gi|107677 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATATGCAGAACAAGCTCT
gi|107678 : AACTTGTC-TGTA----GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATATGCAGAACAAGCTCT
gi|107679 : AACTTGTT-TGTAA---GTAGCCTGCCTCCATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107680 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAATCTCT
gi|107682 : AACTCATT-TGTCA---GTAGCCTGTCTCAATT-A----AGAAA-----T-CA-A-TCATGTGCAGAACATGCTCT
gi|107683 : AACTTGTC-TGTAA---GTAGCTTGCCTCAAT--C----AAAAA-----C-TGGA-TCATACGCAGAACAAGCTCT
gi|107687 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----CAAAA-----C-TG-A-TCATACGCAGAACAGGTTTT
gi|107688 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107694 : AACTTGTCCTGTAA---GTAGCCTGCCTCGA-T-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107695 : AACTTGTT-CGTAA---GTAGCCTGCTTCGATT-C-----AAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107696 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C-----AAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107697 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C-----AAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107698 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TA-A-TTATATGCAGAACAAGCTCT
gi|107699 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107702 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAAAACAAGCTCT
gi|107706 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107707 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107708 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107709 : AGCTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107710 : AGCTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107711 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107714 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TA-A-TCATACGCAGAACAAGCTCT
gi|107715 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACACAGAACAAGCTCT
gi|107717 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107718 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACACAGAACAAGCTCT
gi|107719 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107722 : AATTTGTT-TGCAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107724 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107725 : AACTTGTT-TGTGA---GTAACCTACCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107726 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACA
gi|107727 : AGCTTATT-GGTAA---GTAGCCTGCCTCGATT-A----AAATA-----T-TG-A-TCATATGCAGAACAAGCTCT
gi|107728 : AACTTATT-TGTCA---G-AGCCTGCCTCGATT-T----AAAAA-----C-TG-A-TCATATGCAGAACAAGGTCT
gi|107729 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATTAA----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107730 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C-----AAAA-----C-TGAA-TCGTACGCAGAACAAGCTCT
gi|107732 : AACTTGTC-TGTAA---GTAGCTTGCCTCGAT--C----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107734 : AACTTGTC-TGTAA---TTAGCCTGCCTCGATT-A----AAAAA-----C-TG-A-TCACACGCAGAACAAGCTCT
gi|107736 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TT-A-TCATACGCAGAACAAGCTCT
gi|107737 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATC-C-----AAAA-----C-TG-A-TCATACGTAGAAC-AGCTCT
gi|107738 : AACTTGTT-TGTCA---GTAACTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATATGCAGAGCAAGCTCT
gi|107739 : AACTTGTT-TGTAA---GTAGCCTGTCTCGATT------AAAAATAAACC-TG-A-TCATACGCAGAAGAAGCTCT
gi|107740 : AACTTATT-TGTCA---TTAACCTGCCAAGATT------AAAAA-----T-TT-A-TCATACGCAGATCATGCTCT
gi|107741 : AACTCGTT-TGTAA---ATAGCCTGCCTCGATT-A----AAAAA-----A-TG-A-TCATACGCAGAATAAGCTCTc
gi|107744 : AACTTCTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107746 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATA-C----AAAAA-----C-TG-A-TCATACGCAGAAAAAGCTCT
gi|107747 : AACTTGTC-TATAA---GTAGCTTGCCTCGATT-A----AAAAG-----A-TG-A-TCATACGCAGAACAAGCTCT
gi|107748 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----ATAAA-----C-TG-A-TCATACGCAGAACAAGCTTT
gi|107749 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAATAAGATCT
gi|107750 : AACTTGTT-TATGA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TAATACGCAGAACAAGCTCT
gi|107751 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGC
gi|107752 : AACTTGTT-TGTAATTAGTAGCCTGTCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107753 : AACTTATT--GTCA---GTAACCTGTCTCAGTT-T----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107754 : AACTTATT-TGTAA---GTAGCCTGTCTCGATT-A----ATAAA-----C-TG-A-TCATATTCAGAACAAGCTCTc
gi|107756 : AACTTCTT-TGTAA---GTAGCCTGCCTCGATT-T----AAAAAAACC-C-TG-A-TCATACGCAGAACAAGTTCT
gi|107951 : ACTTGTT-TGTAA---GTAGCCTGCCTCAATT-G----AAAAC-----C-TG-A-TCATACACAGAACAAGCTCT
gi|107952 : ACTTATT-TGTCA---GTAGCTTGTCTCGATT-T----AAAAA-----T-TG-A-TCATACGCAAAAC--GTTCT
gi|107954 : ACTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCTctc
gi|107955 : ACTTGTT-TGTCA---GTAGCCTGCCTCAATT-T----AAAAA-----C-AG-A-TCATACGCAGAACAAGCTCT
gi|107956 : ACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107957 : ACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107959 : ACTTGTT-TGTCA---ATAGCCTCTCTCGATG-T----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107980 : CTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAAC-AGCTCT
blockSeqs : TAAA TAAAC
blockSeqs : A AACC
blockSeqs : A .
blockSeqs : A .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqs : . .
blockSeqCons :
originalCons : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
finalCons : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
Alignments
lowQualScore : 0 000 0 2222 11111 0 0 0
lowQualScore : . ... . .... ..... . . .
lowQualScore : 4 777 4 1111 99999 4 8 4
consensus : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
Reference ( family-90 ) : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107618 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT------AAAAA-----C-TG-A-TCATACGCAGAACAAGCT
gi|107619 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TG-A-TCATATGCAGAACAAGCTCT
gi|107620 : AACTTATT-TGTCA---GTAGCCTGCCTCGACT-T----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107621 : AACTTATT-TGTCA---GTAGCCCGCCTT-ATT-C----AAAAC-----T-TG-A-TCATATGCAGAACATGCTCT
gi|107622 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----AAGAA-----C-TG-A-TCATACGCAGAACAAGCTCTc
gi|107623 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-TTAAAAAAAA-----CCTG-A-TCATACGCAGAACAAGCTCT
gi|107624 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-T--A-TCATACGCAGAACAAGCTCT
gi|107625 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-T----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107626 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107627 : AACTTGTT-TGTAA---GTAGCCTGTCTCGATT-A----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107628 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TT-AGTCATACTCAGAACAAGCTCT
gi|107629 : AACTTGTT-TGTCA---GTAGTCTGCCTCGATT-C----AAAAC-----A-TG-A-TTATACGCAGAACAAGCTCT
gi|107630 : AACTTATT-TGTAA---GTAGCCTGTCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107631 : AACTTATT-TGTCA---GCAGCTAGTCTCAATT-A----AAAAA-----T-TG-A-TCATACTCAGAACATGCTCT
gi|107632 : AACTTGTC-TGTAA---GTAGCCTACCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACATGCTCTc
gi|107633 : AACTTGTT-TGTAA---GTAGCCTGGCTCGATT-C----AAAAC-----T-TG-A-TCATACGCAGGACAAGCTCT
gi|107634 : AACTTGTT-TGTCA---GTAGCCTGTCTCGATT-T----AAAAT-----T-TG-A-TCATACGCGGAACAAGCTTT
gi|107635 : AACTTATT-TGTCA---GTAGCCCGCCTT-ATT-C----AAAAC-----T-TG-A-TCATATGCAGAA-ATGCTCT
gi|107636 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-C-----AAGA-----C-TG-A-TCATACGCAGAACAAGGTCTc
gi|107638 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107641 : AACTTGTT-TGTAA---GTGGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107646 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----AAAAA-----C-TG-A-TCCTACACAGAACAAGCTCT
gi|107647 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107648 : AACTTATC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107649 : AACTTGTT-TGTAA---GTAGCCTGCTTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107651 : AACTTGTT-TGTAA---ATAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107652 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-TA-A-TCATACGCAGAACAAGCTCT
gi|107653 : AACCTCTT-TGTCA---GTAGTCTGCCTCGATT-T----CAAAC-----T-CA-A-TCATACGCAGAACATGCTTT
gi|107654 : AACTTGCT-TGTTA---GTAGTCTGCCTCGATT-C----AAAAC-----C-TA-A-TCATACGCAGAACAAGCTCTc
gi|107655 : AACTTATT-TGTCA---GTAGCTTGACTTGATT-A----AAAAA-----T-TG-A-TCATATGCCGAATATGTTCT
gi|107659 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TT-A-TCATACGCAGAGCAAGCTCTc
gi|107663 : AACTTGTC-TGTAG---GTAGCTTGCCTCGATT------AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107667 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----T-TG-A-TCATACGCAGAACAAGCTCT
gi|107668 : AACTTGTT-TGTGA---GTAGCCTGTCTCGATT-A----AAAAA-----C-TG-A-TCATACGCAGAACAAGGTCT
gi|107670 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----T-GG-A-TCATACGTAGAACAAACTCT
gi|107673 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCCTACGCAGAACAAGCTCT
gi|107674 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAACTC
gi|107675 : AACTTATT-TGTAA----TAGCCTGCCTCGATT-C----AAAA------C-CG-A-TCATACGCAGAACAAGCTCT
gi|107676 : AACTTATT-TGTAA----TAGCCTGCCTCGATT-C----AAAAA-----C-CG-A-TCATACGCAGAACAAGCTCT
gi|107677 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATATGCAGAACAAGCTCT
gi|107678 : AACTTGTC-TGTA----GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATATGCAGAACAAGCTCT
gi|107679 : AACTTGTT-TGTAA---GTAGCCTGCCTCCATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107680 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAATCTCT
gi|107682 : AACTCATT-TGTCA---GTAGCCTGTCTCAATT-A----AGAAA-----T-CA-A-TCATGTGCAGAACATGCTCT
gi|107683 : AACTTGTC-TGTAA---GTAGCTTGCCTCAAT--C----AAAAA-----C-TGGA-TCATACGCAGAACAAGCTCT
gi|107687 : AACTTGTT-TGTCA---GTAGCCTGCCTCGATT-T----CAAAA-----C-TG-A-TCATACGCAGAACAGGTTTT
gi|107688 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107694 : AACTTGTCCTGTAA---GTAGCCTGCCTCGA-T-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107695 : AACTTGTT-CGTAA---GTAGCCTGCTTCGATT-C-----AAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107696 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C-----AAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107697 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C-----AAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107698 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-A----AAAAA-----C-TA-A-TTATATGCAGAACAAGCTCT
gi|107699 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107702 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAAAACAAGCTCT
gi|107706 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107707 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107708 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107709 : AGCTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107710 : AGCTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107711 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107714 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TA-A-TCATACGCAGAACAAGCTCT
gi|107715 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACACAGAACAAGCTCT
gi|107717 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107718 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACACAGAACAAGCTCT
gi|107719 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107722 : AATTTGTT-TGCAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107724 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107725 : AACTTGTT-TGTGA---GTAACCTACCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107726 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACA
gi|107727 : AGCTTATT-GGTAA---GTAGCCTGCCTCGATT-A----AAATA-----T-TG-A-TCATATGCAGAACAAGCTCT
gi|107728 : AACTTATT-TGTCA---G-AGCCTGCCTCGATT-T----AAAAA-----C-TG-A-TCATATGCAGAACAAGGTCT
gi|107729 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATTAA----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107730 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C-----AAAA-----C-TGAA-TCGTACGCAGAACAAGCTCT
gi|107732 : AACTTGTC-TGTAA---GTAGCTTGCCTCGAT--C----AAAAA-----C-TG-A-TCGTACGCAGAACAAGCTCT
gi|107734 : AACTTGTC-TGTAA---TTAGCCTGCCTCGATT-A----AAAAA-----C-TG-A-TCACACGCAGAACAAGCTCT
gi|107736 : AACTTGTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TT-A-TCATACGCAGAACAAGCTCT
gi|107737 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATC-C-----AAAA-----C-TG-A-TCATACGTAGAAC-AGCTCT
gi|107738 : AACTTGTT-TGTCA---GTAACTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATATGCAGAGCAAGCTCT
gi|107739 : AACTTGTT-TGTAA---GTAGCCTGTCTCGATT------AAAAATAAACC-TG-A-TCATACGCAGAAGAAGCTCT
gi|107740 : AACTTATT-TGTCA---TTAACCTGCCAAGATT------AAAAA-----T-TT-A-TCATACGCAGATCATGCTCT
gi|107741 : AACTCGTT-TGTAA---ATAGCCTGCCTCGATT-A----AAAAA-----A-TG-A-TCATACGCAGAATAAGCTCTc
gi|107744 : AACTTCTC-TGTAA---GTAGCTTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107746 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATA-C----AAAAA-----C-TG-A-TCATACGCAGAAAAAGCTCT
gi|107747 : AACTTGTC-TATAA---GTAGCTTGCCTCGATT-A----AAAAG-----A-TG-A-TCATACGCAGAACAAGCTCT
gi|107748 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----ATAAA-----C-TG-A-TCATACGCAGAACAAGCTTT
gi|107749 : AACTTGTT-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAATAAGATCT
gi|107750 : AACTTGTT-TATGA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TAATACGCAGAACAAGCTCT
gi|107751 : AACTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGC
gi|107752 : AACTTGTT-TGTAATTAGTAGCCTGTCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107753 : AACTTATT--GTCA---GTAACCTGTCTCAGTT-T----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107754 : AACTTATT-TGTAA---GTAGCCTGTCTCGATT-A----ATAAA-----C-TG-A-TCATATTCAGAACAAGCTCTc
gi|107756 : AACTTCTT-TGTAA---GTAGCCTGCCTCGATT-T----AAAAAAACC-C-TG-A-TCATACGCAGAACAAGTTCT
gi|107951 : ACTTGTT-TGTAA---GTAGCCTGCCTCAATT-G----AAAAC-----C-TG-A-TCATACACAGAACAAGCTCT
gi|107952 : ACTTATT-TGTCA---GTAGCTTGTCTCGATT-T----AAAAA-----T-TG-A-TCATACGCAAAAC--GTTCT
gi|107954 : ACTTGTT-TGTAA---GTAGCCTGCCTTGATT-C----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCTctc
gi|107955 : ACTTGTT-TGTCA---GTAGCCTGCCTCAATT-T----AAAAA-----C-AG-A-TCATACGCAGAACAAGCTCT
gi|107956 : ACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107957 : ACTTGTC-TGTAA---GTAGCCTGCCTCGATT-CA---AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107959 : ACTTGTT-TGTCA---ATAGCCTCTCTCGATG-T----AAAAA-----C-TG-A-TCATACGCAGAACAAGCTCT
gi|107980 : CTTGTC-TGTAA---GTAGCCTGCCTCGATT-C----AAAAA-----C-TG-A-TCATACGCAGAAC-AGCTCT