lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 333333333333333333333333333333333                                                   
lowQualScore                  :                                                                                                                                                                             11111                   1         111111                2                                          111  1            11111         444444444444444444444                                         111     1111         111   111                                                                                       111                                                                                           666666666666666666666666666666666     333333333                          2          
lowQualScore                  :           55           2 3  2 5   2  2  2    1     2 2   2     2  3          2 33   8 2  2  2      2  666   2  33       2    2            2  5     2   2 555      9       2 00000   66    6666 33 2 2  7777   777777    7   3   3   0     3 555      0       3 3    999999  3  000  4  7777      55555   6  3  000000000000000000000   3 77 1    3          666     8        666     2222 55      333   555       4           8       4 6  4      4    6      1 7  3     3 33  2    5  77 5       666  2      2   8888     444  33  2    5 5  2 5 33  5555 999       99  2   8888888 2          111111111111111111111111111111111     111111111               2  5 5     8 2        
lowQualScore                  :           ..           . .  . .   .  .  .    .     . .   .     .  .          . ..   . .  .  .      .  ...   .  ..       .    .            .  .     .   . ...      .       . .....   ..    .... .. . .  ....   ......    .   .   .   .     . ...      .       . .    ......  .  ...  .  ....      .....   .  .  .....................   . .. .    .          ...     .        ...     .... ..      ...   ...       .           .       . .  .      .    .      . .  .     . ..  .    .  .. .       ...  .      .   ....     ...  ..  .    . .  . . ..  .... ...       ..  .   ....... .          .................................     .........               .  . .     . .        
lowQualScore                  :           11           9 7  9 7   9  9  8    3     9 9   9     9  0          5 99   4 9  9  9      9  666   9  99       9    9            9  7     9   9 000      5       9 00000   88    1111 99 9 5  1111   222222    3   1   3   5     3 888      4       3 3    666666  3  444  6  1111      44444   7  3  111111111111111111111   2 55 4    6          444     9        888     8888 66      333   666       4           9       4 2  4      6    4      6 3  3     3 88  9    7  99 7       888  7      7   0000     777  77  7    3 3  7 3 77  7777 333       22  7   7777777 7          222222222222222222222222222222222     444444444               9  7 7     6 9        
consensus                     :  TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACGTCC-G-TGT-GCTCA-GGTAATGGCCGCTGT--GTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAAT----C--A-AAGC----ATA-----TTTAAAGAA-ACG-TACACCCAG-A---TGTTCCGTGAAAGG-T-CTGA------AA-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTTG-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAAGATTTT--GTGTT-CCAAC-GAAAAG--CAAA---GAATGAT-ACGTATTTTGA-ATTATCT-GAAA-ATATTATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTC-G-TG-T-A--CA----T---AAATTCA-GTT-CGA-------A-CGTATATTGA--------------------------ATAT--TTGAAC--G--TTT-AGTGGAACCCAGTTG-CA-T-CCAAATT-CCATGTAA
Reference ( gi|107014 )       :  TTTTTTTACATCATAGATATAG-ACGA-A-TGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTGT--GTGGA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCATGAAAGG-T-----CTG--AAAT----C--A-ATGC----ATA-----CTTAAAGAA-ACG-TACNCCCAG-A---TGTTCCGTGAAAGG-T-CTGA------AA-TC---AATGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTTG-TTTGTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAAGATTTT--GTGTT-CCAAC-GAAAAG--CAAA---GAATGAT-ACGTATTTTGA-ATTATCT-GAAA-ATATTATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CATGTGCA---AC--TT-GTTC-G-TG-T-A--CA----T---AAATTCA-GTT-TGA-------A-CGTATATTGANNNNNNNNNNNNNNNNNNNNNNNNNAATATAATTGAAC--G--TT--AGTGGAACCCAGTTG-CA-T-CCAAA-T-CCATGTAA
gi|107005                     :  TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCTGT--GTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAAT----C--A-AAGC----ATA-----TTTAAAGAA-ACG-TATATGTAG-T---TG-TCTGTA--------CCGA------CA-TTTCAAAAGC----ATA-CT-----AGAGAA-A-G------A-TTTTG---TGTTT---CCAACG-----AAAAGC-------AAAG-AATGA-TAC--GTATT-T---------------AT---GAAT-------TATCTGGA-AATAT---------TAT---TTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TG--CGTG-GCA---AC--TT-GTTC-G-TG-T-A--CA----T---AAATTCA-GTT-CGA-------A-CGTATATTGA--------------------------ATAT---TGAAC--GTTTT--AGTGGAACCCAGTTG-CA-T-CCAAATT-CCATGTAA
gi|107006                     : tTTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCT-T--GTGAA-TG-GA-CTTGGTGAA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAAT----C--A-AAGC----ATA-----TTTAA--AA-ACG-TA
gi|107013                     : tTTTTTTTACATCATAGATATAG-ACGA-AATGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTGT--GTGAA-TG-GA-CTT-GT-AA-A--TT-TC--CTGTGAG-TGCACGCGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAAT----C--A-ATGC----ATA-----TTTAAAGAA-ACGCTACtatgtagtttgctgtaccgacatttcaaaagcatagctagagaaagatttgtgtttccaacgaaagcaaagatgatacgtattttgagattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107007                     :  TTTTTTTAC-TCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCCTC-GGTAATGGCCGCT-T--GTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAAT----C--A-AAGC----ATA-----TTTAA--AA-ACG-Tatgttgtttgtctgtaccaacatttcaaaagcatagctagagaaaagattttgtgttccacgaaaaagaaagacgaatgatacgtattttaaattatctgaaatatatatttgacgaaggcctctgtaatttataatttgtatagtagtgaatatatagtcatgtgcaacttgttcgtgtgacataaattcagtttgacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107008                     : tTTTTTTTACATCATAGATATAGGATGA-A-TGC-AA-GATCACACCATCCAG-TGT-GCCTC-GGTAATGGCCGCT-T--GTGAAATG-GA-CTTGGG-AAGA-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA--GACC-CAGCA---TGTTCCTTGAA--G-T-----CTG--AAAT----C--A-AAGC----ATA-----TTTAA--AA-ACG-Tcatatgtagtttgctgtaccgacatttcaaaagcatactagagaaagattgtgttccaacgaaaagagcaaagaatgatacgtattttgaattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107015                     : tTCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTGT--GTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAAT----C--A-AAGC----ATA-----TTTAAAGAA-ACT-TAcatatgtagtttggctgtaccgaatttcaaaagcatactagagaagatttgtccaacgaaaagagcaaagcatgatacgtattttgagattatcttggaaatattatttgatgaaggccttgtaatttataattgtaagtagtgtaagtatatactgtcagtgcaacttagttcgctgtacataaattcagttcgaaccgtatattgaatattgaactatttagtggaacccagttgcataccaagttccatgtaa
gi|107016                     :  TCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTGT--GTGAA-TG-GA-CTTGGT-AA-A-TTT--C--CTGTGGA-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAAT----C--A-AAGC----ATA-----TTTAAAGAA-ACT-TAgtttctcaaaagcataggtagagaaagattttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaatattatttgattgtggtttataaatttgtagtattgttaatatatatgttgtgtacaacttgttcgtgtatgtaaattcagttcgaacgtatattgcatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107010                     :  TTTTTTTACATCA--GATATAG-ATGA-A-TGC-AATGA-CACACCATCC---TGT-GCTCA-G-TAATGGCCGCTGTCTGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGA-C-CAG-A---TG-TCCGTGAAAGG-T-----CTG--AAAT----C--A-AAGC----ATA-----TTTAAAGAACACG-Tgttctcaaaagcataggtagagaaagatttttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaaaattattgattgttggttttaaatttgtagtagtgttaatatatatgtttgtacaacttgttcgtgtgattgtaaattcattcgaacgtatattgcatattgaacgttttagtggaacccagttgcattccaaattccatgtaa
gi|107017                     : tTCTTTTTACTACGTAGATATAG-ATGATA-TGC-AA-GACCATAAAATTA-GGTGT-GTTCAAGGCAATGTCGTCTGT--GTGAA-TGAGA-CTTGGT-AA-AGTTT-TCGTCTGTGAGATGCA-ACGC-GGATGGG-AAAGGACCACAG-A---TGTTCCGTGAAAGGCT-----CTGA-AAAT----CCAA-AAGC----ATA-----TTTAAAGAA-ACT-TAtcattgtagtttgtctgtacgac
gi|107018                     :  TTTTTCTGCAT---AGATATAG-ATGA-G-TGC-AA-GAACGTGACGTCC-G-TGT-GTTCA-GGGAATGGCCGATGT--TTAAA-TA-GA-CCAGGG-AG-T-TTT-TC--TTGTGAG-TGTA-ATACTGGATGGG-AA-GGACC-GAG-A---TGCACTACGAAAGG-T-----ATG--AAATAAGAC--ATAGAC----ATA------TTAA--AA-ACG-TAgttctcaaaagcatagcgtagagaaagattttttgtgtttaaaaagaaaaacaaagaatgaccacatattttaaattatctgaaaaaattattgattttagcgttttaaatttgtagtagtgttaataatatgtttgtacacttgttcgatgtgattgttaaattcattcgaacgtatattgcaacttgaacgtttagtggaaccagttgcattccaaattccatgtaa
gi|107009                     :   TTTTTTACATCATAG-T-TAG-ACGA-AATGC-AA-G-TCATAACATCC-G-TGTTGCTCA-GGTAA-GGCCGCTGT--GTA-A-TG-GA-CTTG-T-AA----TG-TC--CTGTGAG-TGCA-CGGCTG-ATGGGCAACGGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAAT----C--A-ATGC----ATA-----TTTAAAGAA-ACG-gtaatggttt
gi|107011                     : tcTTTCTTACTACATAGATATAG-ATGA-A-TGC-AA-GACTGTAAAGTCC-G-TGT-GCTCT-GGGAATGGTCGCTGC--CTAAA-TA-GG-CTCGGT-AG-C-TTT-TC--TTGTGTG-TGCA-ACACTGGATGGC-GA-GGACA-GAG-G---TGTTCCGAAAAAGG-T-----ATG--ACGT----C--A-GAGTCAAAATATTTTTTTTAAAGAA-ACgctacatgttgttttgtctgtaccacatttcaaaagcatagctagagaaaagattttgtgtccacgaaaagaaagacgaatgatacgtattttaaattatctgaaataatatttgacgaaggcctctgtaatttatttaatttgtatagtagtgaatatatagtccatgtgcaacttgttcggtgacataaattcaggtttgaacgtatattggaatattgaacgttagtggaacccagttgcatcccaaattccatgtaa
gi|107012                     : tcTTTCTTACTACATAGATATAG-ATGA-A-TGCAAA-GACTGTAAAGTCC-G-TGT-GCTCT-GG-AATGGTCGCGCC--ATAAA-TA-GAGCTCAGT--A-C-TTT-TC--TTGTG-G-TGCA-ACACTGGATGCG--A-GGA---CAG-AGTGTGTTCCGAAAAAGG-TA----TTG--ACGT----C--A-taagttatttttgcacaaacatttcaaaagcgtgggtaga
gi|107019                     :          tcTCACAGATATAA-ATGA-G-TGC-GT-AGCAATGCCGTCT-G-CGT-GCTCA-GGAAACGGGCGGTGT--ATAAA-CA-GA-CAGGG--AG-G-TTTCTA--CTGCGTG-TGTG-ACTCTGGCTGGG-AA-GGAGC-GAG-A---TGTTCCATTAAAGG-TACATACTGTAAAAT----C--A-gagtcaaatatttttttaaaaaactaaagttatttttgcacaaacattttcaaaagcgtgggtaga
gi|107009                     :                                                                                                                                                                                                                            A-ACG-GAC--CCAG-A---TGTTCCGTGAAAGG-T-CTGA------AA-TC---AATGC----ATATTT-----AAAGAA-ACGGCT-ACA-TGTTGTTTTGTCTGTACC-ACATTT-CAAAAGCATAGC-TAGAGAAAAGATTTT--GTGTC-C--AC-GAAAAG---AAAGACGAATGAT-ACGTATTTTAA-ATTATCT-G-AA-ATAATATTTGACGAAGGCCTCTG-TAATT-TATTT-AATT-TGTAT-AGTAGTG---AA-TATATA--GTCCATGTGCA---AC--TT-GTTCGG-TG---A--CA----T---AAATTCAGGTT-TGA-------A-CGTATATTG-------------------------GAATA---TTGAAC--G--TT--AGTGGAACCCAGTTG-CA-TCCCAAATT-CCATGTAA
gi|107006                     :                                                                                                                        tcttttttacatcatagttagacgaaatgcaagtcataacatccgtgttgctcaggtaaggccgctgtgtaatggacttgtaatgtcctgtgagtgcacggctgatgggcCCCAG-A---TGTTCC-TGAAAGG-T-CTGA------AA-TC---AAAGC----ATATTT-----AAA--A-ACG--T-ATA-TGTAG-TTTG-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAAGATTT---GTGTTTCCAAC-GAAA-G--CAAA---GA-TGAT-ACGTATTTTGAGATTATCT-G-AA-ATATTATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTC-G-TG-T-A--CA----T---AAATTCA-GTT-CGA-------A-CGTATATTGA--------------------------ATAT---TGAAC--GTTTT--AGTGGAACCCAGTTG-CA-T-CCAAT-T-CCATGTAA
gi|107013                     :                                                                                                             ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgcttgtgaatggacttggtgaaattttcctgtgagtgcaacgctggatgggaaggaCCCAG-A---TGTTCCGTGAAAGG-T-CTGA------AA-TC---AATGC----ATATTT-----AAAGAA-ACGC-T-ACA-TGTTG-TTTGTCTGTACCAACATTT-CAAAAGCATAGC-TAGAGAAAAGATTTT--GTGTT-CC-AC-GAAAAA--GAAAGACGAATGAT-ACGTATTTTAA-ATTATCT-GAAATATA-TATTTGACGAAGGCCTCTG-TAATT-TA-T--AATT-TGTAT-AGTAGTG---AA-TATATA--GT-CATGTGCA---AC--TT-GTTC-G-TG-TGA--CA----T---AAATTCA-GTT-TG--------A-CGTATATTGA--------------------------ATAT---TGAAC--GTTTT--AGTGGAACCCAGTTG-CA-T-CCAAATT-CCATGTAA
gi|107007                     :                                                                                                              tttttttacatcatagatatagacgaaatgcaagatcataacatccgtgtgctcaggtaatggccgctgtgtgaatggacttgtaaatttcctgtgagtgcacgcgctggatgggaaggaCCCAG-A---TGTTCC-TGAAAGG-T-CTGA------AA-TC---AAAGC----ATATTT-----AAA--A-ACG--TCATA-TGTAG-TTTG-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAAGATT----GTGTT-CCAAC-GAAAAGAGCAAA---GAATGAT-ACGTATTTTGA-ATTATCT-GAAA--TATTATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTC-G-TG-T-A--CA----T---AAATTCA-GTT-CGA-------A-CGTATATTGATATTGAACGTTT-----------------TAGTGGAAC-----------------CCAGTTG-CA-T-CCAAT-T-CCATGTAA
gi|107008                     :                                                                                                               ttttttttactcatagatatagatgaatgcaagatcacaccatccgtgtgcctcggtaatggccgcttgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggaCCCAGCA---TGTTCCTTGAA--G-T-CTGA------AA-TC---AAAGC----ATATTT-----AAA--A-ACG--TCATA-TGTAG-TTTGGCTGTACCGA-ATTT-CAAAAGCATA-C-TAGAG-AA-GATTT-----GT--CCAAC-GAAAAGAGCAAA---GCATGAT-ACGTATTTTGAGATTATCTTGGAA-ATATTATTTGATGAAGGCCT-TG-TAATT-TA-TA-A--T-TG--TAAGTAGTG-T-AAGTATATACTGT-CA-GTGCA---AC--TTAGTTC-GCTG-T-A--CA----T---AAATTCA-GTT-CGA-------ACCGTATATTGA--------------------------ATAT---TGAACTAT--TT--AGTGGAACCCAGTTG-CA-TACCAAGTT-CCATGTAA
gi|107015                     :                                                                                                           ttttttttacatcatagatataggatgaatgcaagatcacaccatccagtgtgcctcggtaatggccgcttgtgaaatggacttgggaagattttcctgtgagtgcaacgctggatgggaagaCCCAG-A---TGTTCCGTGAAAGG-T-CTGA------AA-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A-------G-TTT--------------CT-CAAAAGCATAGG-TAGAG-AAAGATTTT--GTGTT-TAAAA-GAAAAA--CAAA---GAATGAC-ACATATTTTAA-ATTATCT-GAAA-ATATTATTTGA--------T-TG-TGGTT-TA-TA-AATT-TG--T-AGTATTGTT-AA-TATATA-TGT-TGTGTACA---AC--TT-GTTC-G-TG-T-A--TG----T---AAATTCA-GTT-CGA-------A-CGTATATTG
gi|107016                     :                                                                                                              tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggaCCCAG-A---TGTTCCGTGAAAGG-T-CTGA------AA-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A----------------GT-------TCT-CAAAAGCATAGG-TAGAG-AAAGATTTTT-GTGTT-TAAAA-GAAAAA--CAAA---GAATGAC-ACATATTTTAA-ATTATCT-GAAA-AAATTA-TTGA--------T-TGTTGGTT-T--TA-AATT-TG--T-AGTAGTGTT-AA-TATATA-TGT-T-TGTACA---AC--TT-GTTC-G-TG-T-GATTG----T---AAATTCA--TT-CGA-------A-CGTATATTGcatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107010                     :                                                                                                                tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaatttcctgtggatgcaacgctggatgggaaggaCCAG-A---TGT-CCGTGAAAGG-T-CTGA------AA-TC---AAAGC----ATATTT-----AAAGAACACG--T-TCATTGTAG-TTTGTCTGTACcatattgaacgttttagtggaacccagttgcattccaaattccatgtaa
gi|107017                     :                                                                                                                 ttttttttacatcagatatagatgaatgcaatgacacaccatcctgtgctcagtaatggccgctgtctgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggaCAG-A---TGTTCCGTGAAAGGCT-CTGA------AAATCCA-AAAGC----ATATTT-----AAAGAA-ACT--T-A----------------GT-------TCT-CAAAAGCATAGCGTAGAG-AAAGATTTTTTGTGTT-TAAAAAGAAAAA--CAAA---GAATGACCACATATTTTAA-ATTATCT-GAAA-AAATTA-TTGAT------TT-TA-GCGTT-T--TA-AATT-TG--T-AGTAGTGTT-AA-TA-ATA-TGT-T-TGTAC----AC--TT-GTTC-GATG-T-G---ATTGTT---AAATTCA--TT-CGA-------A-CGTATATTGgac
gi|107012                     :                                                                                                     tctttttactacgtagatatagatgatatgcaagaccataaaattaggtgtgttcaaggcaatgtcgtctgtgtgaatgagacttggtaaagttttcgtctgtgagatgcaacgcggatgggaaaggaccaCAG-AGTGTGTTCCGAAAAAGG-TATTGACGTCAGAG-TC---AA-------ATATTTTTTT-AAA-AA-AC---T-AAA--GTTA-TTT--TTGCACAAACATTTTCAAAAGCGTGGG-TAGAcaacttgaacgtttagtggaaccagttgcattccaaattccatgtaa
gi|107011                     :                                                                                                                  tctttcttactacatagatatagatgaatgcaaagactgtaaagtccgtgtgctctggaatggtcgcgccataaatagagctcagtacttttcttgtggtgcaacactggatgcgaggaAG-G---TGTTCCGAAAAAGG-T-ATGA------CG-TC---AGAGTCAAAATATTTTTTTTAAAGAA-AC---T-A-A--GTTA-TTT--TTGCACAAACATTT-CAAAAGCGTGGG-TAGA
gi|107020                     :                                                                                                                                                                                                                                                                                                                          tctttcttactacatagatatagatgaatgcaagactgtaaagtccgtgtgctctgggaatggtcgctgcctaaataggctcggtagcttttcttgtgtgtgcaacactggatggcgaggacagGAAGAAGGC---TA-TAATT-AG-TA------TG--T-CATGGTG----G-TATATA-TAT-TTTGTATG---AC--TT-CTTCAA-CG-T-A--TA----TTGAAAATTCA--TT-TGA-------A-CTTTTAGTGA
gi|107021                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                 -TG-TAATG-TA-TA-ATTTGTG--T-GGTATTG-TTAA-TACATA-TGT-TGTGTGTACAAACCATT-TTTC-G-TG-TTA--CA----T---AAATTCA-ATTATGA-------A-CGTATACTGCATTATATGAACCGTT--------------TAAGTGAAC------------------CACTTG-CA-T-CCAAATT-CCATGTAAaacccaattgatattcaaattcatgtaa
gi|107024                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                    -TAATTGTA-TGTCATT-TG--T-----GTG-T-A----TATA-TAT-TTTGTATG---AC--TT-CTTC-A-CG-T-A--TA----TTGAAAATTCA-ATT-TGA-------A-CTTTTAGTGA
gi|107022                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                -AATT-TG--T-GGTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTC-G-TG-T-A--CA----T---AAATTCA-ATT-TGA-------A-CGTATATTGaacccaattgtattcaaattccatgtaa
gi|107023                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                -AATTGTG--TCGGTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTC-G-TGGT-A--CA----T---AAATTCA----------------------ATTGAACGTAGTATTGC----------------ATTATTGAAC--G--TTTTAGTGGAACCCACTTG-CA-T-CCAAATT-CCATGTAAcatattgaacgttttagtggaacccacttgcatccaaattccatgtaa
gi|107024                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   -T-AA-T-TGTA-TGT-CAT------------TT-GT---G-TG-T-A--TA----T---ATATTTT-GTA-TGACTTCTTCA-CGTATATTGAAAATTC-------------------AAT----TTGAAC--T--TTT-AGTGAAACCCAATTG-TA-T-TCAAA-TTCCATGTAA
gi|107015                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATAT---TGAAC--G--TTTTAGTGGAACCCAGTTG-CA-T-CCAAATT-CCATGTAA
gi|107016                     :                                                                                                                                                                                                                                                                  tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggacccagatgttccgtgaaaggtctgaaatcaaagcatatttaaagaaacttagtttctcaaaagcataggtagagaaagattttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaatattatttgattgtggtttataaatttgtagtattgttaatatatatgttgtgtacaacttgttcgtgtatgtaaattcagttcgaacgtatattgcATTGAAC--G--TTTTAGTGGAACCCAGTTG-CATT-CCAAATT-CCATGTAA
gi|107022                     :                                                                                                                                                                                                                                                                  tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaatttcctgtggatgcaacgctggatgggaaggacccagatgttccgtgaaaggtctgaaatcaaagcatatttaaagaaacttagttctcaaaagcataggtagagaaagatttttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaaaattattgattgttggttttaaatttgtagtagtgttaatatatatgtttgtacaacttgttcgtgtgattgtaaattcattcgaacgtatattgcatATTGAAC--G--TTTTAGTGGAACCCACTTG-CA-T-CCAAATT-CCATGTAA
gi|107017                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    aatttgtggtattgttaatacatatgttgtgtacaactttttcgtgtacataaattcaatttgaacgtatattgcatTTGAAC--G--TTT-AGTGGAACC-AGTTG-CATT-CCAAATT-CCATGTAA
gi|107020                     :                                                                                                                                                                                                                                               tctttttactacgtagatatagatgatatgcaagaccataaaattaggtgtgttcaaggcaatgtcgtctgtgtgaatgagacttggtaaagttttcgtctgtgagatgcaacgcggatgggaaaggaccacagatgttccgtgaaaggctctgaaaatccaaaagcatatttaaagaaacttagttctcaaaagcatagcgtagagaaagattttttgtgtttaaaaagaaaaacaaagaatgaccacatattttaaattatctgaaaaaattattgattttagcgttttaaatttgtagtagtgttaataatatgtttgtacacttgttcgatgtgattgttaaattcattcgaacgtatattgcaacTTGAAC--T--TTT-AGTGAAACCCAATTGATA-T-TCAAA-T-TCATGTAA





Alignments
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                        1111                                                          1111       111               11111         1111111111        22                                           111                   11                                                                                                   111                                                                                        555555555555555555555555555555555555555        1                                         
lowQualScore                  :                                                                                                                                         3            2   2 2 2   2  2  2    0 1   2 2   2     2  2          555      2  2  2      2  555   2  33       2    2            2  5     2   2 444      1       2 99999   33   2 5555 33    2 1111   77777     2   3   77      2   55555      1       2 2   0000  2 2  999     9999      00000   1  2  6666666666  4 3   22    0  4      3          444     4   4     222   4  4 2   4      11    777  777     4        4   8       4 3  0   4       11     1 6  3   44   33      5  77 2 2      555  2      2   5555     444  33  2     5  2 8 33   5555       44  44  8888888  2   2    2 444444444444444444444444444444444444444      5 8   2 2              2  5 5               
lowQualScore                  :                                                                                                                                         .            .   . . .   .  .  .    . .   . .   .     .  .          ...      .  .  .      .  ...   .  ..       .    .            .  .     .   . ...      .       . .....   ..   . .... ..    . ....   .....     .   .   ..      .   .....      .       . .   ....  . .  ...     ....      .....   .  .  ..........  . .   ..    .  .      .          ...     .   .     ...   .  . .   .      ..    ...  ...     .        .   .       . .  .   .       ..     . .  .   ..   ..      .  .. . .      ...  .      .   ....     ...  ..  .     .  . . ..   ....       ..  ..  .......  .   .    . .......................................      . .   . .              .  . .               
lowQualScore                  :                                                                                                                                         8            7   7 7 7   7  7  5    6 7   7 7   7     7  2          333      7  7  7      7  555   7  77       7    7            7  3     7   7 777      5       7 33333   77   7 7777 77    9 1111   11111     3   1   99      5   88888      8       4 4   0000  4 4  777     1111      99999   8  4  8888888888  2 1   77    4  5      3          222     0   0     777   0  0 5   0      00    000  000     0        0   0       0 8  8   0       99     4 7  3   66   88      7  99 9 9      111  7      7   1111     777  77  7     3  7 0 77   7777       22  11  7777777  7   7    7 000000000000000000000000000000000000000      3 7   7 7              7  3 3               
consensus                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATG-A-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTTG-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAAAG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATCT-GAAAATAT-TATTTGATGAAGGCCT-TG-TAA--TTTA-TAAATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CAT----AAATTCA-GTT-CGA-------AC-GTA-TATT-GA--------------------------A----T--A---TTGAAC-GTTTT-A-GTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAA
Reference ( family-856 )      :                                                                                                                                TTTTTTTACATCATAGATATAG-ATG-A-A-TGC-AA-GACCATAACGTCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTTG-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAAAG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATCT-GAAAATAT-TATTTGATGAAGGCCT-TG-TAA--TTTA-TAAATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CAT----AAATTCA-GTT-CGA-------AC-GTA-TATT-GA--------------------------A----T--AT--TTGAAC-G-TTT-A-GTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAA
gi|107005                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATG-A-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TATATG-TAG-T---TG-TCTGTA--------CCG----AC-A-TTTCAAAAGC----ATA-CT-----AGAGAA-A
gi|107005                     :                                                                                                                                                                                                                                                                                                                                                                     tACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ATA-TGTAG-TTGT-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATTTT--GTGTTT-CCAAC-GAAAAG--CAAA---GA---ATGAT-ACGTATTTATGA-ATTATCT-GGAAATAT-TATTTGATGAAGGCCT-TG-TAA--TTTA-TAAATT-TG--T-A-GTAGTG-T-AA-TATATA-TG--CGTG-GCA---AC--TT-GTTCG-TG-T-A--CAT----AAATTCA-GTT-CGA-------AC-GTA-TATT-GA--------------------------A----T--A---TTGAAC-GTTTT-A-GTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAAgattttgtgtttccaacgaaaagcaaagaatgatacgtatttatgaattatctggaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgcgtggcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107006                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAG-ATG-A-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGTGAA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--TATATG-TAG-----TTTGCTGTA--------CCG----AC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107006                     :                                                                                                                                                                                                                                                                                                                                                                     tACC-CAG-A---TGTTCC-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--T-ATA-TGTAG-TTTG-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTT---GTG-TTTCCAAC-GAAA-G--CAAA---GA----TGAT-ACGTATTT-TGAGATTATCT-GAAA-TAT-TATTTGATGAAGGCCT-TG-TAA--TTTA-TAAATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CAT----AAATTCA-GTT-CGA-------AC-GTA-TATT-GA--------------------------A----T--A---TTGAAC-GTTTT-A-GTGGAACCCAGTTG-CA-T-CC-AATTCCATGTAAgatttgtgtttccaacgaaagcaaagatgatacgtattttgagattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107007                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgcttgtgaatggacttggtgaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTAC-TCATAGATATAG-ATG-A-A-TGC-AA-GATCACACCATCC-G-TGT-GCCTC-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T
gi|107007                     :                                                                                                                                                                                                                                                                                                                                                                     tACC-CAG-A---TGTTCC-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--TCATA-TGTAG-TTTG-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATT----GTG-TT-CCAAC-GAAAAGAGCAAA---GA---ATGAT-ACGTATTT-TGA-ATTATCT-GAAA-TAT-TATTTGATGAAGGCCT-TG-TAA--TTTA-TAAATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CAT----AAATTCA-GTT-CGA-------AC-GTA-TATT-G---------------------------A----T--A---TTGAAC-GTTTT-A-GTGGAACCCAGTTG-CA-T-CC-AATTCCATGTAAcatatgtagtttgctgtaccgacatttcaaaagcatactagagaaagattgtgttccaacgaaaagagcaaagaatgatacgtattttgaattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107008                     :          ttttttttactcatagatatagatgaatgcaagatcacaccatccgtgtgcctcggtaatggccgcttgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAGGATG-A-A-TGC-AA-GATCACACCATCCAG-TGT-GCCTC-GGTAATGGCCGCT---TGTGAAATG-GA-CTTGGG-AAGA-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA--GACC-CAGCA---TGTTCCTTGAA--G-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T
gi|107008                     :                                                                                                                                                                                                                                                                                                                                                                     tACC-CAGCA---TGTTCCTTGAA--G-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--TCATA-TGTAG-TTTGGCTGTACCGA-ATTT-CAAAAGCATA-C-TAGAG-AA--GATTT-----G-T--CCAAC-GAAAAGAGCAAA---GC---ATGAT-ACGTATTT-TGAGATTATCTTGGAAATAT-TATTTGATGAAGGCCT-TG-TAA--TTTA-TAA--T-TG--T-AAGTAGTG-T-AAGTATATACTGT-CA-GTGCA---AC--TTAGTTCGCTG-T-A--CAT----AAATTCA-GTT-CGA-------ACCGTA-TATT-GA--------------------------A----T--A---TTGAACTA-TTT-A-GTGGAACCCAGTTG-CA-TACCAAGTTCCATGTAAcatatgtagtttggctgtaccgaatttcaaaagcatactagagaagatttgtccaacgaaaagagcaaagcatgatacgtattttgagattatcttggaaatattatttgatgaaggccttgtaatttataattgtaagtagtgtaagtatatactgtcagtgcaacttagttcgctgtacataaattcagttcgaaccgtatattgaatattgaactatttagtggaacccagttgcataccaagttccatgtaa
gi|107009                     :       ttttttttacatcatagatataggatgaatgcaagatcacaccatccagtgtgcctcggtaatggccgcttgtgaaatggacttgggaagattttcctgtgagtgcaacgctggatgggaagTTTTTTACATCATAG-T-TAG-ACG-A-AATGC-AA-G-TCATAACATCC-G-TGTTGCTCA-GGTAA-GGCCGCTG--TGT-AA-TG-GA-CTTG-T-AA----TG-TC--CTGTGAG-TGCA-CGGCTG-ATGGGCAACGGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGGCTACAT----G-T---TGTTTT-------G-T-CTGTACCAC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107009                     :                                                                                                                                                                                                                                                                                                                                                                    tcACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGGCT-ACA-TGTTGTTTTGTCTGTACC-ACATTT-CAAAAGCATAGC-TAGAGAAAA-GATTTT--GTG-TC-C--AC-GAAAAG---AAAGACGA---ATGAT-ACGTATTT-TAA-ATTATCT-G-AAATAA-TATTTGACGAAGGCCTCTG-TAA--TTTATTTAATT-TGTAT-A-GTAGTG---AA-TATATA--GTCCATGTGCA---AC--TT-GTTCG--G-TGA--CAT----AAATTCAGGTT-TGA-------AC-GTA-TATTGGA--------------------------A----T--A---TTGAAC-G--TT-A-GTGGAACCCAGTTG-CA-TCCCAAATTCCATGTAAagattttgtgtccacgaaaagaaagacgaatgatacgtattttaaattatctgaaataatatttgacgaaggcctctgtaatttatttaatttgtatagtagtgaatatatagtccatgtgcaacttgttcggtgacataaattcaggtttgaacgtatattggaatattgaacgttagtggaacccagttgcatcccaaattccatgtaa
gi|107010                     :             tcttttttacatcatagttagacgaaatgcaagtcataacatccgtgttgctcaggtaaggccgctgtgtaatggacttgtaatgtcctgtgagtgcacggctgatgggcaacggTTTTTTTACATCA--GATATAG-ATG-A-A-TGC-AATGA-CACACCATCC---TGT-GCTCA--GTAATGGCCGCTGTCTGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGA-C-CAG-A---TG-TCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAACACG--TTCA
gi|107010                     :                                                                                                                                                                                                                                                                                                                                                                       tC-CAG-A---TGT-CCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAACACG--T-TCATTGTAG-TTTGTCTGTA-CGACttgtagtttgtctgtacgac
gi|107011                     :          ttttttttacatcagatatagatgaatgcaatgacacaccatcctgtgctcagtaatggccgctgtctgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggaTTTCTTACTACATAGATATAG-ATG-A-A-TGC-AA-GACTGTAAAGTCC-G-TGT-GCTCT-GGGAATGGTCGCTG--CCTAAA-TA-GG-CTCGGT-AG-C-TTT-TC--TTGTGTG-TGCA-ACACTGGATGGC-GA-GGACA-GAG-G---TGTTCCGAAAAAGG-T-----ATG--ACG-T----C--AGAG-TCAAAATATTTTTTTTAAAGAA-AC
gi|107011                     :                                                                                                                                                                                                                                                                                                                                                                         tcAG-G---TGTTCCGAAAAAGG-T-ATG----AC-G-TC---AGAGTCAAAATATTTTTTTTAAAGAA-AC---T-A-A--GTTA-TTT--TTGCACAAACATTT-CAAAAGCGTGGG-TAGAtaagttatttttgcacaaacatttcaaaagcgtgggtaga
gi|107012                     :     tctttcttactacatagatatagatgaatgcaagactgtaaagtccgtgtgctctgggaatggtcgctgcctaaataggctcggtagcttttcttgtgtgtgcaacactggatggcgaggacagTTTCTTACTACATAGATATAG-ATG-A-A-TGCAAA-GACTGTAAAGTCC-G-TGT-GCTCT-GG-AATGGTCGCGC--CATAAA-TA-GAGCTCAGT--A-C-TTT-TC--TTGTG-G-TGCA-ACACTGGATGCG--A-GGA---CAG-AGTGTGTTCCGAAAAAGG-TA----TTG--ACG-T----C--AGAG-TCAA-ATA-----TTT
gi|107012                     :                                                                                                                                                                                                                                                                                                                                                                       tc-CAG-AGTGTGTTCCGAAAAAGG-TATTG----AC-G-TC---AGAGTCAA-ATATTTTTTT-AAA-AA-AC---T-AAA--GTTA-TTT--TTGCACAAACATTTTCAAAAGCGTGGG-TAGAttttaaaaaactaaagttatttttgcacaaacattttcaaaagcgtgggtaga
gi|107013                     :         tctttcttactacatagatatagatgaatgcaaagactgtaaagtccgtgtgctctggaatggtcgcgccataaatagagctcagtacttttcttgtggtgcaacactggatgcgaggaTTTTTTTACATCATAGATATAG-ACGAA-A-TGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTT-GT-AA-A--TT-TC--CTGTGAG-TGCACGCGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGC-TACAT----G-T---TGTTT--------G-T-CTGTACCAACA-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107013                     :                                                                                                                                                                                                                                                                                                                                                                      ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGC-T-ACA-TGTTG-TTTGTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAAAGATTTT--GTG-TT-CCA-C-GAAAAA--GAAA---GACGAATGAT-ACGTATTT-TAA-ATTATCT-G-AAATATATATTTGACGAAGGCCTCTG-TAA--TTTA-T-AATT-TGTAT-A-GTAGTG---AA-TATATA--GT-CATGTGCA---AC--TT-GTTCG-TG-TGA--CAT----AAATTCA-GTT-TG--------AC-GTA-TATT-GA--------------------------A----T--A---TTGAAC-GTTTT-A-GTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAAagattttgtgttccacgaaaaagaaagacgaatgatacgtattttaaattatctgaaatatatatttgacgaaggcctctgtaatttataatttgtatagtagtgaatatatagtcatgtgcaacttgttcgtgtgacataaattcagtttgacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107014                     :         tttttttacatcatagatatagacgaaatgcaagatcataacatccgtgtgctcaggtaatggccgctgtgtgaatggacttgtaaatttcctgtgagtgcacgcgctggatgggaaggTTTTTTTACATCATAGATATAG-ACG-A-A-TGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGGA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCATGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----CTTAAAGAA-ACG--TACNCC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTTG-TTTGTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAAAG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATCT-GAAAATAT-TATTTGATGAAGGCCT-TG-TAA--TTTA-TAAATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CATGTGCA---AC--TT-GTTCG-TG-T-A--CAT----AAATTCA-GTT-TGA-------AC-GTA-TATT-GANNNNNNNNNNNNNNNNNNNNNNNNNAA----T--ATAATTGAAC-G--TT-A-GTGGAACCCAGTTG-CA-T-CCAAA-TCCATGTAA
gi|107015                     :                                                                                                                                TCTTTTTACTACGTAGATATAG-ATG-A-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107015                     :                                                                                                                                                                                                                                                                                                                                                                      ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A-------G-TTT--------------CT-CAAAAGCATAGG-TAGAG-AAA-GATTTT--GTG-TT-TAAAA-GAAAAA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATCT-GAAAATAT-TATTTGAT---------TG-TGG--TTTA-TAAATT-TG--T-A-GTATTG-TTAA-TATATA-TGT-TGTGTACA---AC--TT-GTTCG-TG-T-A--TGT----AAATTCA-GTT-CGA-------AC-GTA-TATT-GC--------------------------A----T--A---TTGAAC-GTTTT-A-GTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAAgtttctcaaaagcataggtagagaaagattttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaatattatttgattgtggtttataaatttgtagtattgttaatatatatgttgtgtacaacttgttcgtgtatgtaaattcagttcgaacgtatattgcatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107016                     :         tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATG-A-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT--C--CTGTGGA-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107016                     :                                                                                                                                                                                                                                                                                                                                                                      ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A----------------GT-------TCT-CAAAAGCATAGG-TAGAG-AAA-GATTTTT-GTG-TT-TAAAA-GAAAAA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATCT-GAAAAAAT-TA-TTGA--------T-TGTTGG--TTT--TAAATT-TG--T-A-GTAGTGTT-AA-TATATA-TGT-T-TGTACA---AC--TT-GTTCG-TG-T-GATTGT----AAATTCA--TT-CGA-------AC-GTA-TATT-GC--------------------------A----T--A---TTGAAC-GTTTT-A-GTGGAACCCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcataggtagagaaagatttttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaaaattattgattgttggttttaaatttgtagtagtgttaatatatatgtttgtacaacttgttcgtgtgattgtaaattcattcgaacgtatattgcatattgaacgttttagtggaacccagttgcattccaaattccatgtaa
gi|107017                     :          tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaatttcctgtggatgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATG-ATA-TGC-AA-GACCATAAAATTA-GGTGT-GTTCAAGGCAATGTCGTCTG--TGTGAA-TGAGA-CTTGGT-AA-AGTTT-TCGTCTGTGAGATGCA-ACGC-GGATGGG-AAAGGACCACAG-A---TGTTCCGTGAAAGGCT-----CTG--AAAAT----CCAAAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107017                     :                                                                                                                                                                                                                                                                                                                                                                      ACCACAG-A---TGTTCCGTGAAAGGCT-CTG----AA-AATCCA-AAAGC----ATATTT-----AAAGAA-ACT--T-A----------------GT-------TCT-CAAAAGCATAGCGTAGAG-AAA-GATTTTTTGTG-TT-TAAAAAGAAAAA--CAAA---GA---ATGACCACATATTT-TAA-ATTATCT-GAAAAAAT-TATT-GAT-------T-T--TAGCGTTT--TAAATT-TG--T-A-GTAGTG-TTAA-TA-ATA-TGT-T-TGTACA----C--TT-GTTCGATG-T-G---ATTGTTAAATTCA--TT-CGA-------AC-GTA-TATT-GC--------------------------A-------AC--TTGAAC-G-TTT-A-GTGGAA-CCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcatagcgtagagaaagattttttgtgtttaaaaagaaaaacaaagaatgaccacatattttaaattatctgaaaaaattattgattttagcgttttaaatttgtagtagtgttaataatatgtttgtacacttgttcgatgtgattgttaaattcattcgaacgtatattgcaacttgaacgtttagtggaaccagttgcattccaaattccatgtaa
gi|107018                     : tctttttactacgtagatatagatgatatgcaagaccataaaattaggtgtgttcaaggcaatgtcgtctgtgtgaatgagacttggtaaagttttcgtctgtgagatgcaacgcggatgggaaaggTTTTTCTGCAT---AGATATAG-ATG-A-G-TGC-AA-GAACGTGACGTCC-G-TGT-GTTCA-GGGAATGGCCGATG--TTTAAA-TA-GA-CCAGGG-AG-T-TTT-TC--TTGTGAG-TGTA-ATACTGGATGGG-AA-GGACC-GAG-A---TGCACTACGAAAGG-T-----ATG--AAA-TAAGAC--ATAGAC----ATA-----TT---AAAA-ACG--TA
gi|107019                     :                                                                                                                                          TCACAGATATAA-ATG-A-G-TGC-GT-AGCAATGCCGTCT-G-CGT-GCTCA-GGAAACGGGCGGTG--TATAAA-CA-GA-C-AGGG-AG-G-TTTCTA--CTGCGTG-TGTG-ACTCTGGCTGGG-AA-GGAGC-GAG-A---TGTTCCATTAAAGG-TACATACTGTAAAA-T----C--Agtaatggttt
gi|107020                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAGAAGGC---TA-TAA--TTAG-TA-----TG--T-C-ATGGTG-G-TA-TATATA-TTT-TGTATG-----AC--TT-CTTC-------------------------------A-------AC-GTA-TATT-GA--------------------------AAATTC--AT--TTGAAC-T-TTT-A-GTGAAACCCAATTGATA-T-TCAAATT-CATGTAA
gi|107021                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        -TG-TAA--TGTA-TAATTTGTG--T-G-GTATTG-TTAA-TACATA-TGT-TGTGTGTACAAACCATT-TTTCG-TG-TTA--CAT----AAATTCA-ATTATGA-------AC-GTA-TACT-GC--------------------------A----TT-AT--ATGAACCG-TTT-AAGTGAA--CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107022                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATT-TG--T-G-GTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TG-T-A--CAT----AAATTCA-ATT-TGA-------AC-GTA-TATT-GC--------------------------A----T--A---TTGAAC-GTTTT-A-GTGGAACCCACTTG-CA-T-CCAAATTCCATGTAA
gi|107023                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATTGTG--TCG-GTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TGGT-A--CAT----AAATTCA-ATT--GA-------AC-GTAGTATT-GC--------------------------A----T--TA--TTGAAC-G-TTTTA-GTGGAACCCACTTG-CA-T-CCAAATTCCATGTAA
gi|107024                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           -T-AA-T-TGTA-TGT-CAT------------TT-GT--G-TG-T-A--TAT----ATATTTT-GTA-TGACTTCTTCAC-GTA-TATT-GA--------------------------AAAT-TCAAT--TTGAAC-T-TTT-A-GTGAAACCCAATTG-TA-T-TCAAATTCCATGTAA





Alignments
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                       1111                                                          1111       111               11111         1111111111        22                                           111                   11                                                                                                   111                                                                                    333333333333333333333333333                                                            
lowQualScore                  :                                                                                                                                         3            2    2 5   2  2  2    0     2 2   2     2  2          555      2  2  2      2  555   2  33       2    2            2  5     2   2 444      1       2 99999   33   2 5555 33    2 1111   77777     2   3   77      2   55555      1       2 2   0000  2 2  999     9999      00000   1  2  6666666666  4 3   22    0  4      3          444     4   4     222   4  4 2   4      11    777  777     4        4   8       4 3  0   4  0    11     0 6  3     3  3  2    5  77 444      555  2      2   5555     444  33  2     5  2 8 33  5555 444       55  44    2   2    2 333333333333333333333333333  5  777 66666    2 2                  2  5 5               
lowQualScore                  :                                                                                                                                         .            .    . .   .  .  .    .     . .   .     .  .          ...      .  .  .      .  ...   .  ..       .    .            .  .     .   . ...      .       . .....   ..   . .... ..    . ....   .....     .   .   ..      .   .....      .       . .   ....  . .  ...     ....      .....   .  .  ..........  . .   ..    .  .      .          ...     .   .     ...   .  . .   .      ..    ...  ...     .        .   .       . .  .   .  .    ..     . .  .     .  .  .    .  .. ...      ...  .      .   ....     ...  ..  .     .  . . ..  .... ...       ..  ..    .   .    . ...........................  .  ... .....    . .                  .  . .               
lowQualScore                  :                                                                                                                                         8            7    7 3   7  7  5    6     7 7   7     7  2          333      7  7  7      7  555   7  77       7    7            7  3     7   7 777      5       7 33333   77   7 7777 77    9 1111   11111     3   1   99      5   88888      8       4 4   0000  4 4  777     1111      99999   8  4  8888888888  2 1   77    4  5      3          222     0   0     777   0  0 5   0      00    000  000     0        0   0       0 8  8   0  8    99     5 7  1     1  1  7    3  33 222      111  7      7   1111     777  77  7     3  7 0 77  7777 777       33  11    7   7    7 111111111111111111111111111  3  333 77777    7 5                  7  3 3               
consensus                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTTG-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAAAG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATCT-GAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAAC-GTA-TATT-GN--------------------------AT-AT---T-----GAAC-GTTTTAGTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAA
Reference ( family-856 )      :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTTG-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAAAG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATCT-GAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAAC-GTA-TATT-GA--------------------------AT-AT---T-----GAAC-GTTTTAGTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAA
gi|107005                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TATATG-TAG-T---TG-TCTGTA--------CCG----AC-A-TTTCAAAAGC----ATA-CT-----AGAGAA-A
gi|107005                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ATA-TGTAG-TTGT-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATTTT--GTGTTT-CCAAC-GAAAAG--CAAA---GA---ATGAT-ACGTATTTATGA-ATTATCT-GGAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-A-GTAGTG-T-AA-TATATA-TG--CGTG-GCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAAC-GTA-TATT-GA--------------------------AT-AT---T-----GAAC-GTTTTAGTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAAgattttgtgtttccaacgaaaagcaaagaatgatacgtatttatgaattatctggaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgcgtggcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107006                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGTGAA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--TATATG-TAG-----TTTGCTGTA--------CCG----AC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107006                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGTTCC-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--T-ATA-TGTAG-TTTG-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTT---GTG-TTTCCAAC-GAAA-G--CAAA---GA----TGAT-ACGTATTT-TGAGATTATCT-GAAA-TAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAAC-GTA-TATT-GA--------------------------AT-AT---T-----GAAC-GTTTTAGTGGAACCCAGTTG-CA-T-CC-AATTCCATGTAAgatttgtgtttccaacgaaagcaaagatgatacgtattttgagattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107007                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgcttgtgaatggacttggtgaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTAC-TCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCCTC-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T
gi|107007                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGTTCC-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--TCATA-TGTAG-TTTG-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATT----GTG-TT-CCAAC-GAAAAGAGCAAA---GA---ATGAT-ACGTATTT-TGA-ATTATCT-GAAA-TAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAAC-GTA-TATT-G---------------------------AT-AT---T-----GAAC-GTTTTAGTGGAACCCAGTTG-CA-T-CC-AATTCCATGTAAcatatgtagtttgctgtaccgacatttcaaaagcatactagagaaagattgtgttccaacgaaaagagcaaagaatgatacgtattttgaattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107008                     :          ttttttttactcatagatatagatgaatgcaagatcacaccatccgtgtgcctcggtaatggccgcttgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAGGATGA-A-TGC-AA-GATCACACCATCCAG-TGT-GCCTC-GGTAATGGCCGCT---TGTGAAATG-GA-CTTGGG-AAGA-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA--GACC-CAGCA---TGTTCCTTGAA--G-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T
gi|107008                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAGCA---TGTTCCTTGAA--G-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--TCATA-TGTAG-TTTGGCTGTACCGA-ATTT-CAAAAGCATA-C-TAGAG-AA--GATTT-----G-T--CCAAC-GAAAAGAGCAAA---GC---ATGAT-ACGTATTT-TGAGATTATCTTGGAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-A--T-TG--T-AAGTAGTG-T-AAGTATATACTGT-CA-GTGCA---AC--TTAGTTCGCTG-T-A--CA----T---AAATTCA-GTT-CGAACCGTA-TATT-GA--------------------------AT-AT---T-----GAAC-TATTTAGTGGAACCCAGTTG-CA-TACCAAGTTCCATGTAAcatatgtagtttggctgtaccgaatttcaaaagcatactagagaagatttgtccaacgaaaagagcaaagcatgatacgtattttgagattatcttggaaatattatttgatgaaggccttgtaatttataattgtaagtagtgtaagtatatactgtcagtgcaacttagttcgctgtacataaattcagttcgaaccgtatattgaatattgaactatttagtggaacccagttgcataccaagttccatgtaa
gi|107009                     :       ttttttttacatcatagatataggatgaatgcaagatcacaccatccagtgtgcctcggtaatggccgcttgtgaaatggacttgggaagattttcctgtgagtgcaacgctggatgggaagTTTTTTACATCATAG-T-TAG-ACGA-AATGC-AA-G-TCATAACATCC-G-TGTTGCTCA-GGTAA-GGCCGCTG--TGT-AA-TG-GA-CTTG-T-AA----TG-TC--CTGTGAG-TGCA-CGGCTG-ATGGGCAACGGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGGCTACAT----G-T---TGTTTT-------G-T-CTGTACCAC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107009                     :                                                                                                                                                                                                                                                                                                                                                                   tcACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGGCT-ACA-TGTTGTTTTGTCTGTACC-ACATTT-CAAAAGCATAGC-TAGAGAAAA-GATTTT--GTG-TC-C--AC-GAAAAG---AAAGACGA---ATGAT-ACGTATTT-TAA-ATTATCT-G-AAATAA-TATTTGACGAAGGCCTCTG-TAATT-TATTT-AATT-TGTAT-A-GTAGTG---AA-TATATA--GTCCATGTGCA---AC--TT-GTTCG--G-TGA--CA----T---AAATTCAGGTT-TGAAC-GTA-TATTGGA--------------------------AT-AT---T-----GAAC-G--TTAGTGGAACCCAGTTG-CA-TCCCAAATTCCATGTAAagattttgtgtccacgaaaagaaagacgaatgatacgtattttaaattatctgaaataatatttgacgaaggcctctgtaatttatttaatttgtatagtagtgaatatatagtccatgtgcaacttgttcggtgacataaattcaggtttgaacgtatattggaatattgaacgttagtggaacccagttgcatcccaaattccatgtaa
gi|107010                     :             tcttttttacatcatagttagacgaaatgcaagtcataacatccgtgttgctcaggtaaggccgctgtgtaatggacttgtaatgtcctgtgagtgcacggctgatgggcaacggTTTTTTTACATCA--GATATAG-ATGA-A-TGC-AATGA-CACACCATCC---TGT-GCTCA--GTAATGGCCGCTGTCTGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGA-C-CAG-A---TG-TCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAACACG--TTCA
gi|107010                     :                                                                                                                                                                                                                                                                                                                                                                      tC-CAG-A---TGT-CCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAACACG--T-TCATTGTAG-TTTGTCTGTA-CGACttgtagtttgtctgtacgac
gi|107011                     :          ttttttttacatcagatatagatgaatgcaatgacacaccatcctgtgctcagtaatggccgctgtctgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggaTTTCTTACTACATAGATATAG-ATGA-A-TGC-AA-GACTGTAAAGTCC-G-TGT-GCTCT-GGGAATGGTCGCTG--CCTAAA-TA-GG-CTCGGT-AG-C-TTT-TC--TTGTGTG-TGCA-ACACTGGATGGC-GA-GGACA-GAG-G---TGTTCCGAAAAAGG-T-----ATG--ACG-T----C--AGAG-TCAAAATATTTTTTTTAAAGAA-AC
gi|107011                     :                                                                                                                                                                                                                                                                                                                                                                        tcAG-G---TGTTCCGAAAAAGG-T-ATG----AC-G-TC---AGAGTCAAAATATTTTTTTTAAAGAA-AC---T-A-A--GTTA-TTT--TTGCACAAACATTT-CAAAAGCGTGGG-TAGAtaagttatttttgcacaaacatttcaaaagcgtgggtaga
gi|107012                     :     tctttcttactacatagatatagatgaatgcaagactgtaaagtccgtgtgctctgggaatggtcgctgcctaaataggctcggtagcttttcttgtgtgtgcaacactggatggcgaggacagTTTCTTACTACATAGATATAG-ATGA-A-TGCAAA-GACTGTAAAGTCC-G-TGT-GCTCT-GG-AATGGTCGCGC--CATAAA-TA-GAGCTCAGT--A-C-TTT-TC--TTGTG-G-TGCA-ACACTGGATGCG--A-GGA---CAG-AGTGTGTTCCGAAAAAGG-TA----TTG--ACG-T----C--AGAG-TCAA-ATA-----TTT
gi|107012                     :                                                                                                                                                                                                                                                                                                                                                                      tc-CAG-AGTGTGTTCCGAAAAAGG-TATTG----AC-G-TC---AGAGTCAA-ATATTTTTTT-AAA-AA-AC---T-AAA--GTTA-TTT--TTGCACAAACATTTTCAAAAGCGTGGG-TAGAttttaaaaaactaaagttatttttgcacaaacattttcaaaagcgtgggtaga
gi|107013                     :         tctttcttactacatagatatagatgaatgcaaagactgtaaagtccgtgtgctctggaatggtcgcgccataaatagagctcagtacttttcttgtggtgcaacactggatgcgaggaTTTTTTTACATCATAGATATAG-ACGA-AATGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTT-GT-AA-A--TT-TC--CTGTGAG-TGCACGCGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGC-TACAT----G-T---TGTTT--------G-T-CTGTACCAACA-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107013                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGC-T-ACA-TGTTG-TTTGTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAAAGATTTT--GTG-TT-CCA-C-GAAAAA--GAAA---GACGAATGAT-ACGTATTT-TAA-ATTATCT-G-AAATATATATTTGACGAAGGCCTCTG-TAATT-TA-T--AATT-TGTAT-A-GTAGTG---AA-TATATA--GT-CATGTGCA---AC--TT-GTTCG-TG-TGA--CA----T---AAATTCA-GTT-TG-AC-GTA-TATT-GA--------------------------AT-AT---T-----GAAC-GTTTTAGTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAAagattttgtgttccacgaaaaagaaagacgaatgatacgtattttaaattatctgaaatatatatttgacgaaggcctctgtaatttataatttgtatagtagtgaatatatagtcatgtgcaacttgttcgtgtgacataaattcagtttgacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107014                     :         tttttttacatcatagatatagacgaaatgcaagatcataacatccgtgtgctcaggtaatggccgctgtgtgaatggacttgtaaatttcctgtgagtgcacgcgctggatgggaaggTTTTTTTACATCATAGATATAG-ACGA-A-TGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGGA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCATGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----CTTAAAGAA-ACG--TACNCC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTTG-TTTGTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAAAG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATCT-GAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-A-GTAGTG-T-AA-TATATA-TGT-CATGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-TGAAC-GTA-TATT-GANNNNNNNNNNNNNNNNNNNNNNNNNAAT-ATAATT-----GAAC-G--TTAGTGGAACCCAGTTG-CA-T-CCAAA-TCCATGTAA
gi|107015                     :                                                                                                                                TCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107015                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A-------G-TTT--------------CT-CAAAAGCATAGG-TAGAG-AAA-GATTTT--GTG-TT-TAAAA-GAAAAA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATCT-GAAAATAT-TATTTGAT---------TG-TGGTT-TA-TA-AATT-TG--T-A-GTATTG-TTAA-TATATA-TGT-TGTGTACA---AC--TT-GTTCG-TG-T-A--TG----T---AAATTCA-GTT-CGAAC-GTA-TATT-GC--------------------------AT-AT---T-----GAAC-GTTTTAGTGGAACCCAGTTG-CA-T-CCAAATTCCATGTAAgtttctcaaaagcataggtagagaaagattttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaatattatttgattgtggtttataaatttgtagtattgttaatatatatgttgtgtacaacttgttcgtgtatgtaaattcagttcgaacgtatattgcatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107016                     :         tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT--C--CTGTGGA-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107016                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A----------------GT-------TCT-CAAAAGCATAGG-TAGAG-AAA-GATTTTT-GTG-TT-TAAAA-GAAAAA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATCT-GAAAAAAT-TA-TTGA--------T-TGTTGGTT-T--TA-AATT-TG--T-A-GTAGTGTT-AA-TATATA-TGT-T-TGTACA---AC--TT-GTTCG-TG-T-GATTG----T---AAATTCA--TT-CGAAC-GTA-TATT-GC--------------------------AT-AT---T-----GAAC-GTTTTAGTGGAACCCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcataggtagagaaagatttttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaaaattattgattgttggttttaaatttgtagtagtgttaatatatatgtttgtacaacttgttcgtgtgattgtaaattcattcgaacgtatattgcatattgaacgttttagtggaacccagttgcattccaaattccatgtaa
gi|107017                     :          tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaatttcctgtggatgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATGATA-TGC-AA-GACCATAAAATTA-GGTGT-GTTCAAGGCAATGTCGTCTG--TGTGAA-TGAGA-CTTGGT-AA-AGTTT-TCGTCTGTGAGATGCA-ACGC-GGATGGG-AAAGGACCACAG-A---TGTTCCGTGAAAGGCT-----CTG--AAAAT----CCAAAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107017                     :                                                                                                                                                                                                                                                                                                                                                                     ACCACAG-A---TGTTCCGTGAAAGGCT-CTG----AA-AATCCA-AAAGC----ATATTT-----AAAGAA-ACT--T-A----------------GT-------TCT-CAAAAGCATAGCGTAGAG-AAA-GATTTTTTGTG-TT-TAAAAAGAAAAA--CAAA---GA---ATGACCACATATTT-TAA-ATTATCT-GAAAAAAT-TA-TTGAT------TT-TA-GCGTT-T--TA-AATT-TG--T-A-GTAGTGTT-AA-TA-ATA-TGT-T-TGTAC----AC--TT-GTTCGATG-T-G---ATTGTT---AAATTCA--TT-CGAAC-GTA-TATT-GC--------------------------AA-CT---T-----GAAC-G-TTTAGTGGAA-CCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcatagcgtagagaaagattttttgtgtttaaaaagaaaaacaaagaatgaccacatattttaaattatctgaaaaaattattgattttagcgttttaaatttgtagtagtgttaataatatgtttgtacacttgttcgatgtgattgttaaattcattcgaacgtatattgcaacttgaacgtttagtggaaccagttgcattccaaattccatgtaa
gi|107018                     : tctttttactacgtagatatagatgatatgcaagaccataaaattaggtgtgttcaaggcaatgtcgtctgtgtgaatgagacttggtaaagttttcgtctgtgagatgcaacgcggatgggaaaggTTTTTCTGCAT---AGATATAG-ATGA-G-TGC-AA-GAACGTGACGTCC-G-TGT-GTTCA-GGGAATGGCCGATG--TTTAAA-TA-GA-CCAGGG-AG-T-TTT-TC--TTGTGAG-TGTA-ATACTGGATGGG-AA-GGACC-GAG-A---TGCACTACGAAAGG-T-----ATG--AAA-TAAGAC--ATAGAC----ATA-----TT---AAAA-ACG--TA
gi|107019                     :                                                                                                                                          TCACAGATATAA-ATGA-G-TGC-GT-AGCAATGCCGTCT-G-CGT-GCTCA-GGAAACGGGCGGTG--TATAAA-CA-GA-C-AGGG-AG-G-TTTCTA--CTGCGTG-TGTG-ACTCTGGCTGGG-AA-GGAGC-GAG-A---TGTTCCATTAAAGG-TACATACTGTAAAA-T----C--Agtaatggttt
gi|107020                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAGAAGGC---TA-TAATT-AG-TA------TG--T-C-ATGGTG-G-TA-TATATA-TTT-TGTATG-----AC--TT-CTTC----------------------------------AAC-GTA-TATT-GA--------------------------AA-AT---TCATTTGAAC--TTTTAGTGAAACCCAATTGATA-T-TCAAATT-CATGTAA
gi|107021                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       -TG-TAATG-TA-TA-ATTTGTG--T-G-GTATTG-TTAA-TACATA-TGT-TGTGTGTACAAACCATT-TTTCG-TG-TTA--CA----T---AAATTCA-ATTATGAAC-GTA-TACT-GC--------------------------ATTATA--T-----GAACCGTTTAAGTGAA--CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107022                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      -AATT-TG--T-G-GTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TG-T-A--CA----T---AAATTCA-ATT-TGAAC-GTA-TATT-GC--------------------------AT-AT---T-----GAAC-GTTTTAGTGGAACCCACTTG-CA-T-CCAAATTCCATGTAA
gi|107023                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      -AATTGTG--TCG-GTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TGGT-A--CA----T---AAATTCA-ATT--GAAC-GTAGTATT-GC--------------------------ATTAT---T-----GAAC-GTTTTAGTGGAACCCACTTG-CA-T-CCAAATTCCATGTAA
gi|107024                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          -TAATTGTA-TGTCATT-TG--T------GTG-T-A--TATATA-TTT-TGTATG-----AC--TT-CTTCA-CG-T-A--TA----TTGAAAATTCA-ATT-TGAAC----------------------------------------------------------TTTTAGTGAAACCCAATTG-TA-T-TCAAATTCCATGTAA





Alignments
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                       1111                                                          1111       111               11111         1111111111        222                                                                                                                                                                       111                                                                                                          1111111111111111         11111111111                            
lowQualScore                  :                                                                                                                                         3            2    2 5   2  2  2    0     2 2   2     2  2          555      2  2  2      2  555   2  33       2    2            2  5     2   2 444      1       2 99999   33   2 5555 33    2 1111   77777     2   3   77      2   55555      1       2 2   0000  2 2  999     9999      00000   0  2  6666666666  4 3   222    0  4      3          444     4   4      99   4  4 2   4    55  55    777  777     4        4   8      4  3  0   4  0    11     0 6  3     3  3  2    5  77 5       555  2      2   5555     444  33  2     5  2 8 33  5555 444       55  44   2    2    2 4  5  2 66666    2    7777777777777777         22222222222       2  5 5               
lowQualScore                  :                                                                                                                                         .            .    . .   .  .  .    .     . .   .     .  .          ...      .  .  .      .  ...   .  ..       .    .            .  .     .   . ...      .       . .....   ..   . .... ..    . ....   .....     .   .   ..      .   .....      .       . .   ....  . .  ...     ....      .....   .  .  ..........  . .   ...    .  .      .          ...     .   .      ..   .  . .   .    ..  ..    ...  ...     .        .   .      .  .  .   .  .    ..     . .  .     .  .  .    .  .. .       ...  .      .   ....     ...  ..  .     .  . . ..  .... ...       ..  ..   .    .    . .  .  . .....    .    ................         ...........       .  . .               
lowQualScore                  :                                                                                                                                         8            7    7 3   7  7  5    6     7 7   7     7  2          333      7  7  7      7  555   7  77       7    7            7  3     7   7 777      5       7 33333   77   7 7777 77    9 1111   11111     3   1   99      5   88888      8       4 4   0000  4 4  777     1111      99999   3  4  8888888888  2 1   777    4  5      3          222     0   0      55   0  0 5   0    55  55    000  000     0        0   0      0  8  8   0  8    99     5 7  1     1  1  7    3  33 3       111  7      7   1111     777  77  7     3  7 0 77  7777 777       33  11   7    7    7 5  3  7 77777    7    7777777777777777         77777777777       7  3 3               
consensus                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GNAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAA
Reference ( family-856 )      :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GNAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAA
gi|107005                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TATATG-TAG-T---TG-TCTGTA--------CCG----AC-A-TTTCAAAAGC----ATA-CT-----AGAGAA-A
gi|107005                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ATA-TGTAG-TTG-T-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATTTT--GTGTTT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTTATGA-ATTATC-TGGAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TG--CGTG-GCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GAAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAAgattttgtgtttccaacgaaaagcaaagaatgatacgtatttatgaattatctggaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgcgtggcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107006                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGTGAA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--TATATG-TAG-----TTTGCTGTA--------CCG----AC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107006                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGTTCC-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--T-ATA-TGTAG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTT---GTG-TTTCCAAC-GAAA---G--CAAA---GA----TGAT-ACGTATTT-TGAGATTATC-TGAAA-TAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GAAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CC-AATTCCATGTAAgatttgtgtttccaacgaaagcaaagatgatacgtattttgagattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107007                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgcttgtgaatggacttggtgaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTAC-TCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCCTC-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T
gi|107007                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGTTCC-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--TCATA-TGTAG-TTT-G-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATT----GTG-TT-CCAAC-GAAA--AGAGCAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAA-TAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-G-AT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CC-AATTCCATGTAAcatatgtagtttgctgtaccgacatttcaaaagcatactagagaaagattgtgttccaacgaaaagagcaaagaatgatacgtattttgaattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107008                     :          ttttttttactcatagatatagatgaatgcaagatcacaccatccgtgtgcctcggtaatggccgcttgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAGGATGA-A-TGC-AA-GATCACACCATCCAG-TGT-GCCTC-GGTAATGGCCGCT---TGTGAAATG-GA-CTTGGG-AAGA-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA--GACC-CAGCA---TGTTCCTTGAA--G-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T
gi|107008                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAGCA---TGTTCCTTGAA--G-T-CTG----AA-A-TC---AAAGC----ATATTT-----AA--AA-ACG--TCATA-TGTAG-TTTGG-CTGTACCGA-ATTT-CAAAAGCATA-C-TAGAG--AA-GA-TTT--G----T-CCAAC-GAAAAGAG--CAAA---GC---ATGAT-ACGTATTT-TGAGATTATCTTGGAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-A--T-TG--TAAGTAGTG-T-AAGTATATACTGT-CA-GTGCA---AC--TTAGTTCGCTG-T-A--CA----T---AAATTCA-GTT-CGAACCGTA-TATT-GAAT-AT-T-----GAAC-TATT----------------TAGTGGAAC-----------CCAGTTG-CA-TACCAAGTTCCATGTAAcatatgtagtttggctgtaccgaatttcaaaagcatactagagaagatttgtccaacgaaaagagcaaagcatgatacgtattttgagattatcttggaaatattatttgatgaaggccttgtaatttataattgtaagtagtgtaagtatatactgtcagtgcaacttagttcgctgtacataaattcagttcgaaccgtatattgaatattgaactatttagtggaacccagttgcataccaagttccatgtaa
gi|107009                     :       ttttttttacatcatagatataggatgaatgcaagatcacaccatccagtgtgcctcggtaatggccgcttgtgaaatggacttgggaagattttcctgtgagtgcaacgctggatgggaagTTTTTTACATCATAG-T-TAG-ACGA-AATGC-AA-G-TCATAACATCC-G-TGTTGCTCA-GGTAA-GGCCGCTG--TGT-AA-TG-GA-CTTG-T-AA----TG-TC--CTGTGAG-TGCA-CGGCTG-ATGGGCAACGGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGGCTACAT----G-T---TGTTTT-------G-T-CTGTACCAC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107009                     :                                                                                                                                                                                                                                                                                                                                                                   tcACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGGCT-ACA-TGTTGTTTT-GTCTGTACC-ACATTT-CAAAAGCATAGC-TAGAGAAAA-GATTTT--GTG-TC-C--AC-GAAA--AG---AAAGACGA---ATGAT-ACGTATTT-TAA-ATTATC-TG-AAATAA-TATTTGACGAAGGCCTCTG-TAATT-TATTT-AATT-TGTAT-AGTAGTG---AA-TATATA--GTCCATGTGCA---AC--TT-GTTCG--G-TGA--CA----T---AAATTCAGGTT-TGAA-CGTA-TATTGGAAT-AT-T-----GAAC-G--T----------------TAGTGGAAC-----------CCAGTTG-CA-TCCCAAATTCCATGTAAagattttgtgtccacgaaaagaaagacgaatgatacgtattttaaattatctgaaataatatttgacgaaggcctctgtaatttatttaatttgtatagtagtgaatatatagtccatgtgcaacttgttcggtgacataaattcaggtttgaacgtatattggaatattgaacgttagtggaacccagttgcatcccaaattccatgtaa
gi|107010                     :             tcttttttacatcatagttagacgaaatgcaagtcataacatccgtgttgctcaggtaaggccgctgtgtaatggacttgtaatgtcctgtgagtgcacggctgatgggcaacggTTTTTTTACATCA--GATATAG-ATGA-A-TGC-AATGA-CACACCATCC---TGT-GCTCA--GTAATGGCCGCTGTCTGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGA-C-CAG-A---TG-TCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAACACG--TTCA
gi|107010                     :                                                                                                                                                                                                                                                                                                                                                                      tC-CAG-A---TGT-CCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAACACG--T-TCATTGTAG-TTT-GTCTGTA-CGACttgtagtttgtctgtacgac
gi|107011                     :          ttttttttacatcagatatagatgaatgcaatgacacaccatcctgtgctcagtaatggccgctgtctgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggaTTTCTTACTACATAGATATAG-ATGA-A-TGC-AA-GACTGTAAAGTCC-G-TGT-GCTCT-GGGAATGGTCGCTG--CCTAAA-TA-GG-CTCGGT-AG-C-TTT-TC--TTGTGTG-TGCA-ACACTGGATGGC-GA-GGACA-GAG-G---TGTTCCGAAAAAGG-T-----ATG--ACG-T----C--AGAG-TCAAAATATTTTTTTTAAAGAA-AC
gi|107011                     :                                                                                                                                                                                                                                                                                                                                                                        tcAG-G---TGTTCCGAAAAAGG-T-ATG----AC-G-TC---AGAGTCAAAATATTTTTTTTAAAGAA-AC---T-A-A--GTTA-TTT---TTGCACAAACATTT-CAAAAGCGTGGG-TAGAtaagttatttttgcacaaacatttcaaaagcgtgggtaga
gi|107012                     :     tctttcttactacatagatatagatgaatgcaagactgtaaagtccgtgtgctctgggaatggtcgctgcctaaataggctcggtagcttttcttgtgtgtgcaacactggatggcgaggacagTTTCTTACTACATAGATATAG-ATGA-A-TGCAAA-GACTGTAAAGTCC-G-TGT-GCTCT-GG-AATGGTCGCGC--CATAAA-TA-GAGCTCAGT--A-C-TTT-TC--TTGTG-G-TGCA-ACACTGGATGCG--A-GGA---CAG-AGTGTGTTCCGAAAAAGG-TA----TTG--ACG-T----C--AGAG-TCAA-ATA-----TTT
gi|107012                     :                                                                                                                                                                                                                                                                                                                                                                      tc-CAG-AGTGTGTTCCGAAAAAGG-TATTG----AC-G-TC---AGAGTCAA-ATATTTTTTT-AAA-AA-AC---T-AAA--GTTA-TTT---TTGCACAAACATTTTCAAAAGCGTGGG-TAGAttttaaaaaactaaagttatttttgcacaaacattttcaaaagcgtgggtaga
gi|107013                     :         tctttcttactacatagatatagatgaatgcaaagactgtaaagtccgtgtgctctggaatggtcgcgccataaatagagctcagtacttttcttgtggtgcaacactggatgcgaggaTTTTTTTACATCATAGATATAG-ACGA-AATGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTT-GT-AA-A--TT-TC--CTGTGAG-TGCACGCGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGC-TACAT----G-T---TGTTT--------G-T-CTGTACCAACA-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107013                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGC-T-ACA-TGTTG-TTT-GTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAAAGATTTT--GTG-TT-CCA-C-GAAA--AA--GAAA---GACGAATGAT-ACGTATTT-TAA-ATTATC-TG-AAATATATATTTGACGAAGGCCTCTG-TAATT-TA-T--AATT-TGTAT-AGTAGTG---AA-TATATA--GT-CATGTGCA---AC--TT-GTTCG-TG-TGA--CA----T---AAATTCA-GTT-TG-A-CGTA-TATT-GAAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAAagattttgtgttccacgaaaaagaaagacgaatgatacgtattttaaattatctgaaatatatatttgacgaaggcctctgtaatttataatttgtatagtagtgaatatatagtcatgtgcaacttgttcgtgtgacataaattcagtttgacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107014                     :         tttttttacatcatagatatagacgaaatgcaagatcataacatccgtgtgctcaggtaatggccgctgtgtgaatggacttgtaaatttcctgtgagtgcacgcgctggatgggaaggTTTTTTTACATCATAGATATAG-ACGA-A-TGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGGA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCATGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----CTTAAAGAA-ACG--TACNCC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTTG-TTT-GTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CATGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-TGAA-CGTA-TATT-GANN-NN-N-----NNNN-NNNNNNNNNNNNNNNNAATATAATTGAACGTTAGTGGAACCCAGTTG-CA-T-CCAAA-TCCATGTAA
gi|107015                     :                                                                                                                                TCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107015                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A-------G-TTT---------------CT-CAAAAGCATAGG-TAGAG-AAA-GATTTT--GTG-TT-TAAAA-GAAA--AA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATC-TGAAAATAT-TATTTGAT---------TG-TGGTT-TA-TA-AATT-TG--T-AGTATTG-TTAA-TATATA-TGT-TGTGTACA---AC--TT-GTTCG-TG-T-A--TG----T---AAATTCA-GTT-CGAA-CGTA-TATT-GCAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAAgtttctcaaaagcataggtagagaaagattttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaatattatttgattgtggtttataaatttgtagtattgttaatatatatgttgtgtacaacttgttcgtgtatgtaaattcagttcgaacgtatattgcatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107016                     :         tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT--C--CTGTGGA-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107016                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A-----------------GT-------TCT-CAAAAGCATAGG-TAGAG-AAA-GATTTTT-GTG-TT-TAAAA-GAAA--AA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATC-TGAAAAAAT-TA-TTGA--------T-TGTTGGTT-T--TA-AATT-TG--T-AGTAGTGTT-AA-TATATA-TGT-T-TGTACA---AC--TT-GTTCG-TG-T-GATTG----T---AAATTCA--TT-CGAA-CGTA-TATT-GCAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcataggtagagaaagatttttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaaaattattgattgttggttttaaatttgtagtagtgttaatatatatgtttgtacaacttgttcgtgtgattgtaaattcattcgaacgtatattgcatattgaacgttttagtggaacccagttgcattccaaattccatgtaa
gi|107017                     :          tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaatttcctgtggatgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATGATA-TGC-AA-GACCATAAAATTA-GGTGT-GTTCAAGGCAATGTCGTCTG--TGTGAA-TGAGA-CTTGGT-AA-AGTTT-TCGTCTGTGAGATGCA-ACGC-GGATGGG-AAAGGACCACAG-A---TGTTCCGTGAAAGGCT-----CTG--AAAAT----CCAAAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107017                     :                                                                                                                                                                                                                                                                                                                                                                     ACCACAG-A---TGTTCCGTGAAAGGCT-CTG----AA-AATCCA-AAAGC----ATATTT-----AAAGAA-ACT--T-A-----------------GT-------TCT-CAAAAGCATAGCGTAGAG-AAA-GATTTTTTGTG-TT-TAAAAAGAAA--AA--CAAA---GA---ATGACCACATATTT-TAA-ATTATC-TGAAAAAAT-TA-TTGAT------TT-TA-GCGTT-T--TA-AATT-TG--T-AGTAGTGTT-AA-TA-ATA-TGT-T-TGTAC----AC--TT-GTTCGATG-T-G---ATTGTT---AAATTCA--TT-CGAA-CGTA-TATT-GCAA-CT-T-----GAAC-G-TT----------------TAGTGGAA------------CCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcatagcgtagagaaagattttttgtgtttaaaaagaaaaacaaagaatgaccacatattttaaattatctgaaaaaattattgattttagcgttttaaatttgtagtagtgttaataatatgtttgtacacttgttcgatgtgattgttaaattcattcgaacgtatattgcaacttgaacgtttagtggaaccagttgcattccaaattccatgtaa
gi|107018                     : tctttttactacgtagatatagatgatatgcaagaccataaaattaggtgtgttcaaggcaatgtcgtctgtgtgaatgagacttggtaaagttttcgtctgtgagatgcaacgcggatgggaaaggTTTTTCTGCAT---AGATATAG-ATGA-G-TGC-AA-GAACGTGACGTCC-G-TGT-GTTCA-GGGAATGGCCGATG--TTTAAA-TA-GA-CCAGGG-AG-T-TTT-TC--TTGTGAG-TGTA-ATACTGGATGGG-AA-GGACC-GAG-A---TGCACTACGAAAGG-T-----ATG--AAA-TAAGAC--ATAGAC----ATA-----TT---AAAA-ACG--TA
gi|107019                     :                                                                                                                                          TCACAGATATAA-ATGA-G-TGC-GT-AGCAATGCCGTCT-G-CGT-GCTCA-GGAAACGGGCGGTG--TATAAA-CA-GA-C-AGGG-AG-G-TTTCTA--CTGCGTG-TGTG-ACTCTGGCTGGG-AA-GGAGC-GAG-A---TGTTCCATTAAAGG-TACATACTGTAAAA-T----C--Agtaatggttt
gi|107020                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGAAGGC---TA-TAATT-AG-TA------TG--T-CATGGTG-G-TA-TATATA-TTT-TGTATG-----AC--TT-CTTC----------------------------------AA-CGTA-TATT-GAAA-AT-TCATTTGAAC--TTT----------------TAGTGAAAC-----------CCAATTGATA-T-TCAAATT-CATGTAA
gi|107021                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          -TG-TAATG-TA-TA-ATTTGTG--T-GGTATTG-TTAA-TACATA-TGT-TGTGTGTACAAACCATT-TTTCG-TG-TTA--CA----T---AAATTCA-ATTATGAA-CGTA-TACT-GCATTATAT-----GAACCGTTT----------------AAGTGAA-------------CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107022                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         -AATT-TG--T-GGTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TG-T-A--CA----T---AAATTCA-ATT-TGAA-CGTA-TATT-GCAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107023                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         -AATTGTG--TCGGTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TGGT-A--CA----T---AAATTCA-ATT--GAA-CGTAGTATT-GCATTAT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107024                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             -TAATTGTA-TGTCATT-TG--T-----GTG-T-A--TATATA-TTT-TGTATG-----AC--TT-CTTCA-CG-T-A--TA----TTGAAAATTCA-ATT-TGAA-C-----------------------------TTT----------------TAGTGAAAC-----------CCAATTG-TA-T-TCAAATTCCATGTAA





Alignments
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                       1111                                                          1111       111               11111         1111111111        222                                                                                                                                                                       111                                                                                                          1111111111111111         11111111111                            
lowQualScore                  :                                                                                                                                         3            2    2 5   2  2  2    0     2 2   2     2  2          555      2  2  2      2  555   2  33       2    2            2  5     2   2 444      1       2 99999   33   2 5555 33    2 1111   77777     2   3   77      2   55555      1       2 2   0000  2 2  999     9999      00000   0  2  6666666666  4 3   222    0  4      3          444     4   4      99   4  4 2   4    55  55    777  777     4        4   8      4  3  0   4  0    11     0 6  3     3  3  2    5  77 5       555  2      2   5555     444  33  2     5  2 8 33  5555 444       55  44   2    2    2 4  5  2 66666    2    7777777777777777         22222222222       2  5 5               
lowQualScore                  :                                                                                                                                         .            .    . .   .  .  .    .     . .   .     .  .          ...      .  .  .      .  ...   .  ..       .    .            .  .     .   . ...      .       . .....   ..   . .... ..    . ....   .....     .   .   ..      .   .....      .       . .   ....  . .  ...     ....      .....   .  .  ..........  . .   ...    .  .      .          ...     .   .      ..   .  . .   .    ..  ..    ...  ...     .        .   .      .  .  .   .  .    ..     . .  .     .  .  .    .  .. .       ...  .      .   ....     ...  ..  .     .  . . ..  .... ...       ..  ..   .    .    . .  .  . .....    .    ................         ...........       .  . .               
lowQualScore                  :                                                                                                                                         8            7    7 3   7  7  5    6     7 7   7     7  2          333      7  7  7      7  555   7  77       7    7            7  3     7   7 777      5       7 33333   77   7 7777 77    9 1111   11111     3   1   99      5   88888      8       4 4   0000  4 4  777     1111      99999   3  4  8888888888  2 1   777    4  5      3          222     0   0      55   0  0 5   0    55  55    000  000     0        0   0      0  8  8   0  8    99     5 7  1     1  1  7    3  33 3       111  7      7   1111     777  77  7     3  7 0 77  7777 777       33  11   7    7    7 5  3  7 77777    7    7777777777777777         77777777777       7  3 3               
consensus                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GNAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAA
Reference ( family-856 )      :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GNAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAA
gi|107005                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TATATG-TAG-T---TG-TCTGTA--------CCG----AC-A-TTTCAAAAGC----ATA-CT-----AGAGAA-A
gi|107005                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ATA-TGTAG-TTG-T-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATTTT--GTGTTT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTTATGA-ATTATC-TGGAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TG--CGTG-GCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GAAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAAgattttgtgtttccaacgaaaagcaaagaatgatacgtatttatgaattatctggaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgcgtggcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107006                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGTGAA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--TATATG-TAG-----TTTGCTGTA--------CCG----AC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107006                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGTTCC-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--T-ATA-TGTAG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTT---GTG-TTTCCAAC-GAAA---G--CAAA---GA----TGAT-ACGTATTT-TGAGATTATC-TGAAA-TAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GAAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CC-AATTCCATGTAAgatttgtgtttccaacgaaagcaaagatgatacgtattttgagattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107007                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgcttgtgaatggacttggtgaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTAC-TCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCCTC-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T
gi|107007                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGTTCC-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--TCATA-TGTAG-TTT-G-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATT----GTG-TT-CCAAC-GAAA--AGAGCAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAA-TAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-G-AT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CC-AATTCCATGTAAcatatgtagtttgctgtaccgacatttcaaaagcatactagagaaagattgtgttccaacgaaaagagcaaagaatgatacgtattttgaattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107008                     :          ttttttttactcatagatatagatgaatgcaagatcacaccatccgtgtgcctcggtaatggccgcttgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAGGATGA-A-TGC-AA-GATCACACCATCCAG-TGT-GCCTC-GGTAATGGCCGCT---TGTGAAATG-GA-CTTGGG-AAGA-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA--GACC-CAGCA---TGTTCCTTGAA--G-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T
gi|107008                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAGCA---TGTTCCTTGAA--G-T-CTG----AA-A-TC---AAAGC----ATATTT-----AA--AA-ACG--TCATA-TGTAG-TTTGG-CTGTACCGA-ATTT-CAAAAGCATA-C-TAGAG--AA-GA-TTT--G----T-CCAAC-GAAAAGAG--CAAA---GC---ATGAT-ACGTATTT-TGAGATTATCTTGGAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-A--T-TG--TAAGTAGTG-T-AAGTATATACTGT-CA-GTGCA---AC--TTAGTTCGCTG-T-A--CA----T---AAATTCA-GTT-CGAACCGTA-TATT-GAAT-AT-T-----GAAC-TATT----------------TAGTGGAAC-----------CCAGTTG-CA-TACCAAGTTCCATGTAAcatatgtagtttggctgtaccgaatttcaaaagcatactagagaagatttgtccaacgaaaagagcaaagcatgatacgtattttgagattatcttggaaatattatttgatgaaggccttgtaatttataattgtaagtagtgtaagtatatactgtcagtgcaacttagttcgctgtacataaattcagttcgaaccgtatattgaatattgaactatttagtggaacccagttgcataccaagttccatgtaa
gi|107009                     :       ttttttttacatcatagatataggatgaatgcaagatcacaccatccagtgtgcctcggtaatggccgcttgtgaaatggacttgggaagattttcctgtgagtgcaacgctggatgggaagTTTTTTACATCATAG-T-TAG-ACGA-AATGC-AA-G-TCATAACATCC-G-TGTTGCTCA-GGTAA-GGCCGCTG--TGT-AA-TG-GA-CTTG-T-AA----TG-TC--CTGTGAG-TGCA-CGGCTG-ATGGGCAACGGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGGCTACAT----G-T---TGTTTT-------G-T-CTGTACCAC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107009                     :                                                                                                                                                                                                                                                                                                                                                                   tcACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGGCT-ACA-TGTTGTTTT-GTCTGTACC-ACATTT-CAAAAGCATAGC-TAGAGAAAA-GATTTT--GTG-TC-C--AC-GAAA--AG---AAAGACGA---ATGAT-ACGTATTT-TAA-ATTATC-TG-AAATAA-TATTTGACGAAGGCCTCTG-TAATT-TATTT-AATT-TGTAT-AGTAGTG---AA-TATATA--GTCCATGTGCA---AC--TT-GTTCG--G-TGA--CA----T---AAATTCAGGTT-TGAA-CGTA-TATTGGAAT-AT-T-----GAAC-G--T----------------TAGTGGAAC-----------CCAGTTG-CA-TCCCAAATTCCATGTAAagattttgtgtccacgaaaagaaagacgaatgatacgtattttaaattatctgaaataatatttgacgaaggcctctgtaatttatttaatttgtatagtagtgaatatatagtccatgtgcaacttgttcggtgacataaattcaggtttgaacgtatattggaatattgaacgttagtggaacccagttgcatcccaaattccatgtaa
gi|107010                     :             tcttttttacatcatagttagacgaaatgcaagtcataacatccgtgttgctcaggtaaggccgctgtgtaatggacttgtaatgtcctgtgagtgcacggctgatgggcaacggTTTTTTTACATCA--GATATAG-ATGA-A-TGC-AATGA-CACACCATCC---TGT-GCTCA--GTAATGGCCGCTGTCTGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGA-C-CAG-A---TG-TCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAACACG--TTCA
gi|107010                     :                                                                                                                                                                                                                                                                                                                                                                      tC-CAG-A---TGT-CCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAACACG--T-TCATTGTAG-TTT-GTCTGTA-CGACttgtagtttgtctgtacgac
gi|107011                     :          ttttttttacatcagatatagatgaatgcaatgacacaccatcctgtgctcagtaatggccgctgtctgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggaTTTCTTACTACATAGATATAG-ATGA-A-TGC-AA-GACTGTAAAGTCC-G-TGT-GCTCT-GGGAATGGTCGCTG--CCTAAA-TA-GG-CTCGGT-AG-C-TTT-TC--TTGTGTG-TGCA-ACACTGGATGGC-GA-GGACA-GAG-G---TGTTCCGAAAAAGG-T-----ATG--ACG-T----C--AGAG-TCAAAATATTTTTTTTAAAGAA-AC
gi|107011                     :                                                                                                                                                                                                                                                                                                                                                                        tcAG-G---TGTTCCGAAAAAGG-T-ATG----AC-G-TC---AGAGTCAAAATATTTTTTTTAAAGAA-AC---T-A-A--GTTA-TTT---TTGCACAAACATTT-CAAAAGCGTGGG-TAGAtaagttatttttgcacaaacatttcaaaagcgtgggtaga
gi|107012                     :     tctttcttactacatagatatagatgaatgcaagactgtaaagtccgtgtgctctgggaatggtcgctgcctaaataggctcggtagcttttcttgtgtgtgcaacactggatggcgaggacagTTTCTTACTACATAGATATAG-ATGA-A-TGCAAA-GACTGTAAAGTCC-G-TGT-GCTCT-GG-AATGGTCGCGC--CATAAA-TA-GAGCTCAGT--A-C-TTT-TC--TTGTG-G-TGCA-ACACTGGATGCG--A-GGA---CAG-AGTGTGTTCCGAAAAAGG-TA----TTG--ACG-T----C--AGAG-TCAA-ATA-----TTT
gi|107012                     :                                                                                                                                                                                                                                                                                                                                                                      tc-CAG-AGTGTGTTCCGAAAAAGG-TATTG----AC-G-TC---AGAGTCAA-ATATTTTTTT-AAA-AA-AC---T-AAA--GTTA-TTT---TTGCACAAACATTTTCAAAAGCGTGGG-TAGAttttaaaaaactaaagttatttttgcacaaacattttcaaaagcgtgggtaga
gi|107013                     :         tctttcttactacatagatatagatgaatgcaaagactgtaaagtccgtgtgctctggaatggtcgcgccataaatagagctcagtacttttcttgtggtgcaacactggatgcgaggaTTTTTTTACATCATAGATATAG-ACGA-AATGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTT-GT-AA-A--TT-TC--CTGTGAG-TGCACGCGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGC-TACAT----G-T---TGTTT--------G-T-CTGTACCAACA-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107013                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGC-T-ACA-TGTTG-TTT-GTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAAAGATTTT--GTG-TT-CCA-C-GAAA--AA--GAAA---GACGAATGAT-ACGTATTT-TAA-ATTATC-TG-AAATATATATTTGACGAAGGCCTCTG-TAATT-TA-T--AATT-TGTAT-AGTAGTG---AA-TATATA--GT-CATGTGCA---AC--TT-GTTCG-TG-TGA--CA----T---AAATTCA-GTT-TG-A-CGTA-TATT-GAAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAAagattttgtgttccacgaaaaagaaagacgaatgatacgtattttaaattatctgaaatatatatttgacgaaggcctctgtaatttataatttgtatagtagtgaatatatagtcatgtgcaacttgttcgtgtgacataaattcagtttgacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107014                     :         tttttttacatcatagatatagacgaaatgcaagatcataacatccgtgtgctcaggtaatggccgctgtgtgaatggacttgtaaatttcctgtgagtgcacgcgctggatgggaaggTTTTTTTACATCATAGATATAG-ACGA-A-TGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGGA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCATGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----CTTAAAGAA-ACG--TACNCC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTTG-TTT-GTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CATGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-TGAA-CGTA-TATT-GANN-NN-N-----NNNN-NNNNNNNNNNNNNNNNAATATAATTGAACGTTAGTGGAACCCAGTTG-CA-T-CCAAA-TCCATGTAA
gi|107015                     :                                                                                                                                TCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107015                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A-------G-TTT---------------CT-CAAAAGCATAGG-TAGAG-AAA-GATTTT--GTG-TT-TAAAA-GAAA--AA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATC-TGAAAATAT-TATTTGAT---------TG-TGGTT-TA-TA-AATT-TG--T-AGTATTG-TTAA-TATATA-TGT-TGTGTACA---AC--TT-GTTCG-TG-T-A--TG----T---AAATTCA-GTT-CGAA-CGTA-TATT-GCAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAAgtttctcaaaagcataggtagagaaagattttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaatattatttgattgtggtttataaatttgtagtattgttaatatatatgttgtgtacaacttgttcgtgtatgtaaattcagttcgaacgtatattgcatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107016                     :         tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT--C--CTGTGGA-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107016                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A-----------------GT-------TCT-CAAAAGCATAGG-TAGAG-AAA-GATTTTT-GTG-TT-TAAAA-GAAA--AA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATC-TGAAAAAAT-TA-TTGA--------T-TGTTGGTT-T--TA-AATT-TG--T-AGTAGTGTT-AA-TATATA-TGT-T-TGTACA---AC--TT-GTTCG-TG-T-GATTG----T---AAATTCA--TT-CGAA-CGTA-TATT-GCAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcataggtagagaaagatttttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaaaattattgattgttggttttaaatttgtagtagtgttaatatatatgtttgtacaacttgttcgtgtgattgtaaattcattcgaacgtatattgcatattgaacgttttagtggaacccagttgcattccaaattccatgtaa
gi|107017                     :          tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaatttcctgtggatgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATGATA-TGC-AA-GACCATAAAATTA-GGTGT-GTTCAAGGCAATGTCGTCTG--TGTGAA-TGAGA-CTTGGT-AA-AGTTT-TCGTCTGTGAGATGCA-ACGC-GGATGGG-AAAGGACCACAG-A---TGTTCCGTGAAAGGCT-----CTG--AAAAT----CCAAAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107017                     :                                                                                                                                                                                                                                                                                                                                                                     ACCACAG-A---TGTTCCGTGAAAGGCT-CTG----AA-AATCCA-AAAGC----ATATTT-----AAAGAA-ACT--T-A-----------------GT-------TCT-CAAAAGCATAGCGTAGAG-AAA-GATTTTTTGTG-TT-TAAAAAGAAA--AA--CAAA---GA---ATGACCACATATTT-TAA-ATTATC-TGAAAAAAT-TA-TTGAT------TT-TA-GCGTT-T--TA-AATT-TG--T-AGTAGTGTT-AA-TA-ATA-TGT-T-TGTAC----AC--TT-GTTCGATG-T-G---ATTGTT---AAATTCA--TT-CGAA-CGTA-TATT-GCAA-CT-T-----GAAC-G-TT----------------TAGTGGAA------------CCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcatagcgtagagaaagattttttgtgtttaaaaagaaaaacaaagaatgaccacatattttaaattatctgaaaaaattattgattttagcgttttaaatttgtagtagtgttaataatatgtttgtacacttgttcgatgtgattgttaaattcattcgaacgtatattgcaacttgaacgtttagtggaaccagttgcattccaaattccatgtaa
gi|107018                     : tctttttactacgtagatatagatgatatgcaagaccataaaattaggtgtgttcaaggcaatgtcgtctgtgtgaatgagacttggtaaagttttcgtctgtgagatgcaacgcggatgggaaaggTTTTTCTGCAT---AGATATAG-ATGA-G-TGC-AA-GAACGTGACGTCC-G-TGT-GTTCA-GGGAATGGCCGATG--TTTAAA-TA-GA-CCAGGG-AG-T-TTT-TC--TTGTGAG-TGTA-ATACTGGATGGG-AA-GGACC-GAG-A---TGCACTACGAAAGG-T-----ATG--AAA-TAAGAC--ATAGAC----ATA-----TT---AAAA-ACG--TA
gi|107019                     :                                                                                                                                          TCACAGATATAA-ATGA-G-TGC-GT-AGCAATGCCGTCT-G-CGT-GCTCA-GGAAACGGGCGGTG--TATAAA-CA-GA-C-AGGG-AG-G-TTTCTA--CTGCGTG-TGTG-ACTCTGGCTGGG-AA-GGAGC-GAG-A---TGTTCCATTAAAGG-TACATACTGTAAAA-T----C--Agtaatggttt
gi|107020                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGAAGGC---TA-TAATT-AG-TA------TG--T-CATGGTG-G-TA-TATATA-TTT-TGTATG-----AC--TT-CTTC----------------------------------AA-CGTA-TATT-GAAA-AT-TCATTTGAAC--TTT----------------TAGTGAAAC-----------CCAATTGATA-T-TCAAATT-CATGTAA
gi|107021                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          -TG-TAATG-TA-TA-ATTTGTG--T-GGTATTG-TTAA-TACATA-TGT-TGTGTGTACAAACCATT-TTTCG-TG-TTA--CA----T---AAATTCA-ATTATGAA-CGTA-TACT-GCATTATAT-----GAACCGTTT----------------AAGTGAA-------------CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107022                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         -AATT-TG--T-GGTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TG-T-A--CA----T---AAATTCA-ATT-TGAA-CGTA-TATT-GCAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107023                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         -AATTGTG--TCGGTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TGGT-A--CA----T---AAATTCA-ATT--GAA-CGTAGTATT-GCATTAT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107024                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             -TAATTGTA-TGTCATT-TG--T-----GTG-T-A--TATATA-TTT-TGTATG-----AC--TT-CTTCA-CG-T-A--TA----TTGAAAATTCA-ATT-TGAA-C-----------------------------TTT----------------TAGTGAAAC-----------CCAATTG-TA-T-TCAAATTCCATGTAA


blockSeqs                     :                                                                                                                                         A            G    T A   A  T  T          A G   T     A  T          GTC      A  A  G      G  GA    C  GT       A    C            C  C     A   C GTG      T       C ACATA   TA   A AAGA CA    A CAAA   TTTTT     A   C   GC      A   AGTG       G       C A   TACC  C A  TCA     CAAA      TTTTT      C  GGCTACAT    A T   GG        G      T          GCG     A   A      TT   .  T C   A    AG  AG    GAC  CGA     C        .   G      T  A      A       TG       C  T     G  T  T    G  TA A       TT   G      C   CCAT     CAA  CA  A     C  G G AT  TTGT TGA       GG  AT   C    G    G A  T  A CATTT    C    NNNNNNNNNNNNAATA         GTTAGTGGAAC       A  T A
blockSeqs                     :                                                                                                                                         A            .    . A   .  .  T          . .   .     .  T          G        .  .  .      .  AG    .  .        .    .            .  A     .   . .        G       . A       .    . .    .     . CAA    .         A   .   C       .   CA         G       . .   TACC  . .  TCA     CAA       TTTT       .  GTCATAT     A .   GT        G      .          GC      .   .      T    .  . C   .    .   .     .    .       .        .   G      .  A      .       TG       C  .     .  .  .    G  TA C       TT   .      .   CAT      .    .   .     A  . G .   .    .         G   C    .    .    . A  T  . .        .    .                        .                 .  T C
blockSeqs                     :                                                                                                                                         A            .    . .   .  .  T          . .   .     .  T          G        .  .  .      .  A     .  .        .    .            .  .     .   . .        G       . .       .    . .    .     . .      .         A   .   .       .   A          T       . .   .     . .  TCA     .         .          .  GTCATAT     A .   GT        G      .          GC      .   .      .    .  . C   .    .   .     .    .       .        .   .      .  G      .       TG       .  .     .  .  .    .  .  .       TT   .      .   CAT      .    .   .     .  . T .   .    .         G   C    .    .    . A  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         A            .    . .   .  .  T          . .   .     .  T          C        .  .  .      .  A     .  .        .    .            .  .     .   . .        G       . .       .    . .    .     . .      .         A   .   .       .   A          G       . .   .     . .  CA      .         .          .  GTTCATT     T .   GT        G      .          GG      .   .      .    .  . C   .    .   .     .    .       .        .   .      .  A      .       CG       .  .     .  .  .    .  .  .       TT   .      .   TGT      .    .   .     .  . . .   .    .         G   C    .    .    . A  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         T            .    . .   .  .  C          . .   .     .  T          G        .  .  .      .  A     .  .        .    .            .  .     .   . .        G       . .       .    . .    .     . .      .         A   .   .       .   A          G       . .   .     . .  .       .         .          .  GCTACAT     A .   GT        A      .          GG      .   .      .    .  . C   .    .   .     .    .       .        .   .      .  A      .       CG       .  .     .  .  .    .  .  .       TT   .      .   TGT      .    .   .     .  . . .   .    .         G   T    .    .    . A  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         T            .    . .   .  .  C          . .   .     .  G          G        .  .  .      .  C     .  .        .    .            .  .     .   . .        G       . .       .    . .    .     . .      .         A   .   .       .   T          G       . .   .     . .  .       .         .          .  GTATAT      T .   G         A      .          GC      .   .      .    .  . A   .    .   .     .    .       .        .   .      .  A      .       TG       .  .     .  .  .    .  .  .       TT   .      .   TGT      .    .   .     .  . . .   .    .         G   T    .    .    . C  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         A            .    . .   .  .  T          . .   .     .  T          G        .  .  .      .  C     .  .        .    .            .  .     .   . .        A       . .       .    . .    .     . .      .         A   .   .       .   A          G       . .   .     . .  .       .         .          .  GTACAT      T .   G         A      .          GC      .   .      .    .  . A   .    .   .     .    .       .        .   .      .  A      .       AG       .  .     .  .  .    .  .  .       T    .      .   TGT      .    .   .     .  . . .   .    .         G   T    .    .    . C  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         A            .    . .   .  .  T          . .   .     .  T          G        .  .  .      .  A     .  .        .    .            .  .     .   . .        G       . .       .    . .    .     . .      .         A   .   .       .   A          G       . .   .     . .  .       .         .          .  TAAA        T .   .         A      .          GG      .   .      .    .  . A   .    .   .     .    .       .        .   .      .  .      .       T        .  .     .  .  .    .  .  .       T    .      .   TGT      .    .   .     .  . . .   .    .         A   C    .    .    . C  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         T            .    . .   .  .  C          . .   .     .  C          G        .  .  .      .  A     .  .        .    .            .  .     .   . .        G       . .       .    . .    .     . .      .         A   .   .       .   G          G       . .   .     . .  .       .         .          .  TAA         T .   .         .      .          GG      .   .      .    .  . .   .    .   .     .    .       .        .   .      .  .      .       T        .  .     .  .  .    .  .  .       T    .      .   TGT      .    .   .     .  . . .   .    .         A   C    .    .    . A  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         T            .    . .   .  .  C          . .   .     .  C          G        .  .  .      .  A     .  .        .    .            .  .     .   . .        G       . .       .    . .    .     . .      .         .   .   .       .   T          G       . .   .     . .  .       .         .          .  TTA         . .   .         .      .          C                                                                                                  .        .  .     .  .  .    .  .  .       T    .      .   CA       .    .   .     .  . . .   .    .         A   C    .    .    . C  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         T            .    . .   .  .  C          . .   .     .  C          G        .  .  .      .  A     .  .        .    .            .  .     .   . .        A       . .       .    . .    .     . .      .         .   .   .       .   A          G       . .   .     . .  .       .         .          .  TTA         . .   .         .      .          C                                                                                                           .  .     .  .  .    .  .  .       G    .      .   CA       .    .   .     .  . . .   .    .         A   T    .    .    . C  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         A            .    . .   .  .  A          . .   .     .  G          .        .  .  .      .  T     .  .        .    .            .  .     .   . .        A       . .       .    . .    .     . .      .         .   .           .   A          G       . .   .     . .  .       .         .          .  TTA         . .   .         .                                                                                                                                .     .  .  .    .  .  .       T    .      .   CA       .    .   .     .  . . .   .    .         .   T    .    .    . C  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                         .            .    . .   .  .  C          . .   .     .  A          .        .  .  .      .  G     .  .        .    .            .  .     .   . .        .       . .       .    . .    .     . .      .                         .   A          .       . .   .     . .  .       .         .          .                                                                                                                                                                           .    .  .  .       .    .      .   TT       .    .   .     .  . . .   .    .         .   .    .    .    . .  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                                      .    . .   .  .  .          . .   .     .  .          .        .  .  .      .  .     .  .        .    .            .  .     .   . .        .       . .       .    . .    .                                        .   A          .       . .   .     . .  .       .         .          .                                                                                                                                                                           .    .  .  .       .    .      .   TT       .    .   .     .  . . .   .    .         .   .    .    .    . .  .  . .        .    .                        .                 .  . .
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                        .   A          .       . .   .     . .  .       .         .          .                                                                                                                                                                                                                                                                                                                                                            
blockSeqs                     :                                                                                                                                                                                                                                                                                                                                                                            .          .       . .   .     . .  .       .         .          .                                                                                                                                                                                                                                                                                                                                                            


blockSeqCons                  :                                                                                                                                                                                                                                                                                                                                                                                                                ***                             GTACAT****        G**                         GN*
originalCons                  :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GNAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAA
finalCons                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGTTCCGTGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACGTACAT----GTNG-TTTG--CTGTACCGACATTT-CAAAAGCATAGN-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GNAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAA





Alignments
lowQualScore                  :                                                                                                                                                                                                                                                                                                                                       1111                                                                        222               11111         1111111111        222                                                                                                                                                                       111                                                                                                          1111111111111111         11111111111                            
lowQualScore                  :                                                                                                                                         3            2    2 5   2  2  2    0     2 2   2     2  2          555      2  2  2      2  555   2  33       2    2            2  5     2   2 444      1       2 99999   33   2 5555 33    2 1111   77777     2   3   77     33   55555   33   33  0 1  2 2   9999  2 2  222     8888   0  00000      2  6666666666  4 3   222    0  4      3          666     4   4      99   4  4 2   4    55  55    777  777     4        4   8      4  3  0   4  0    11     0 6  3     3  3  2    5  77 5       555  2      2   5555     444  33  2     5  2 8 33  5555 444       55  44   2    2    2 4  5  2 66666    2    7777777777777777         22222222222       2  5 5               
lowQualScore                  :                                                                                                                                         .            .    . .   .  .  .    .     . .   .     .  .          ...      .  .  .      .  ...   .  ..       .    .            .  .     .   . ...      .       . .....   ..   . .... ..    . ....   .....     .   .   ..     ..   .....   ..   ..  . .  . .   ....  . .  ...     ....   .  .....      .  ..........  . .   ...    .  .      .          ...     .   .      ..   .  . .   .    ..  ..    ...  ...     .        .   .      .  .  .   .  .    ..     . .  .     .  .  .    .  .. .       ...  .      .   ....     ...  ..  .     .  . . ..  .... ...       ..  ..   .    .    . .  .  . .....    .    ................         ...........       .  . .               
lowQualScore                  :                                                                                                                                         8            7    7 3   7  7  5    6     7 7   7     7  2          333      7  7  7      7  555   7  77       7    7            7  3     7   7 777      5       7 33333   77   7 7777 77    9 1111   11111     3   1   99     33   00000   11   33  6 8  2 2   4444  2 2  555     6666   4  33333      2  8888888888  2 1   777    4  5      3          888     0   0      55   0  0 5   0    55  55    000  000     0        0   0      0  8  8   0  8    99     5 7  1     1  1  7    3  33 3       111  7      7   1111     777  77  7     3  7 0 77  7777 777       33  11   7    7    7 5  3  7 77777    7    7777777777777777         77777777777       7  3 3               
consensus                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGT--TCCG-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GNAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAA
Reference ( family-856 )      :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GACCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TACACC-CAG-A---TGT--TCCG-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTNG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGN-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CGTGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GNAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAA
gi|107005                     :                                                                                                                                TTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACG--TATATG-TAG-T---TG---TCTG-TA--------CCG----AC-A-TTTCAAAAGC----ATA-CT-----AGAGAA-A
gi|107005                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGT--TCCG-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACG--T-ATA-TGTAG-TTG-T-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATTTT--GTGTTT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTTATGA-ATTATC-TGGAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TG--CGTG-GCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GAAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAAgattttgtgtttccaacgaaaagcaaagaatgatacgtatttatgaattatctggaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgcgtggcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107006                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCTCA-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGTGAA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--TATATG-TAG-----TTT--GCTG-TA--------CCG----AC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107006                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGT--TCC--TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--T-ATA-TGTAG-TTT-G-CTGTACCGACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTT---GTG-TTTCCAAC-GAAA---G--CAAA---GA----TGAT-ACGTATTT-TGAGATTATC-TGAAA-TAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-GAAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CC-AATTCCATGTAAgatttgtgtttccaacgaaagcaaagatgatacgtattttgagattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgaatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107007                     :        ttttttttacatcatagatatagatgaatgcaagatcacaccatccgtgtgctcaggtaatggccgcttgtgaatggacttggtgaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTAC-TCATAGATATAG-ATGA-A-TGC-AA-GATCACACCATCC-G-TGT-GCCTC-GGTAATGGCCGCT---TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCC-TGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T------CAT-A---TGTAGTTTGCTGTA------CCG----AC-A-TTTCAAAAGC----ATA-CT-----AGAGAA-A
gi|107007                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAG-A---TGT--TCC--TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAA--A-ACG--TCATA-TGTAG-TTT-G-CTGTACCGACATTT-CAAAAGCATA-C-TAGAG-AAA-GATT----GTG-TT-CCAAC-GAAA--AGAGCAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAA-TAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CA-GTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-CGAA-CGTA-TATT-G-AT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CC-AATTCCATGTAAgattgtgttccaacgaaaagagcaaagaatgatacgtattttgaattatctgaaatattatttgatgaaggccttgtaatttataaatttgtagtagtgtaatatatatgtcagtgcaacttgttcgtgtacataaattcagttcgaacgtatattgatattgaacgttttagtggaacccagttgcatccaattccatgtaa
gi|107008                     :          ttttttttactcatagatatagatgaatgcaagatcacaccatccgtgtgcctcggtaatggccgcttgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTTTTTTTACATCATAGATATAGGATGA-A-TGC-AA-GATCACACCATCCAG-TGT-GCCTC-GGTAATGGCCGCT---TGTGAAATG-GA-CTTGGG-AAGA-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA--GACC-CAGCA---TGTTCCTTGAA--G-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAA--AA-ACG--T
gi|107008                     :                                                                                                                                                                                                                                                                                                                                                                    tACC-CAGCA---TGT--TCCT-TGAA--G-T-CTG----AA-A-TC---AAAGC----ATATTT-----AA--AA-ACG--TCATA-TGTAG-TTTGG-CTGTACCGA-ATTT-CAAAAGCATA-C-TAGAG--AA-GA-TTT--G----T-CCAAC-GAAAAGAG--CAAA---GC---ATGAT-ACGTATTT-TGAGATTATCTTGGAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-A--T-TG--TAAGTAGTG-T-AAGTATATACTGT-CA-GTGCA---AC--TTAGTTCGCTG-T-A--CA----T---AAATTCA-GTT-CGAACCGTA-TATT-GAAT-AT-T-----GAAC-TATT----------------TAGTGGAAC-----------CCAGTTG-CA-TACCAAGTTCCATGTAAcatatgtagtttggctgtaccgaatttcaaaagcatactagagaagatttgtccaacgaaaagagcaaagcatgatacgtattttgagattatcttggaaatattatttgatgaaggccttgtaatttataattgtaagtagtgtaagtatatactgtcagtgcaacttagttcgctgtacataaattcagttcgaaccgtatattgaatattgaactatttagtggaacccagttgcataccaagttccatgtaa
gi|107009                     :       ttttttttacatcatagatataggatgaatgcaagatcacaccatccagtgtgcctcggtaatggccgcttgtgaaatggacttgggaagattttcctgtgagtgcaacgctggatgggaagTTTTTTACATCATAG-T-TAG-ACGA-AATGC-AA-G-TCATAACATCC-G-TGTTGCTCA-GGTAA-GGCCGCTG--TGT-AA-TG-GA-CTTG-T-AA----TG-TC--CTGTGAG-TGCA-CGGCTG-ATGGGCAACGGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGGCTACAT----G-T---TGT--TTT--------G-T-CTGTACCAC-A-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107009                     :                                                                                                                                                                                                                                                                                                                                                                   tcACC-CAG-A---TGT--TCCG-TGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGGCT-ACA-TGTTGTTTT-GTCTGTACC-ACATTT-CAAAAGCATAGC-TAGAGAAAA-GATTTT--GTG-TC-C--AC-GAAA--AG---AAAGACGA---ATGAT-ACGTATTT-TAA-ATTATC-TG-AAATAA-TATTTGACGAAGGCCTCTG-TAATT-TATTT-AATT-TGTAT-AGTAGTG---AA-TATATA--GTCCATGTGCA---AC--TT-GTTCG--G-TGA--CA----T---AAATTCAGGTT-TGAA-CGTA-TATTGGAAT-AT-T-----GAAC-G--T----------------TAGTGGAAC-----------CCAGTTG-CA-TCCCAAATTCCATGTAAagattttgtgtccacgaaaagaaagacgaatgatacgtattttaaattatctgaaataatatttgacgaaggcctctgtaatttatttaatttgtatagtagtgaatatatagtccatgtgcaacttgttcggtgacataaattcaggtttgaacgtatattggaatattgaacgttagtggaacccagttgcatcccaaattccatgtaa
gi|107010                     :             tcttttttacatcatagttagacgaaatgcaagtcataacatccgtgttgctcaggtaaggccgctgtgtaatggacttgtaatgtcctgtgagtgcacggctgatgggcaacggTTTTTTTACATCA--GATATAG-ATGA-A-TGC-AATGA-CACACCATCC---TGT-GCTCA--GTAATGGCCGCTGTCTGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGA-C-CAG-A---TG-TCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAACACG--TTCA
gi|107010                     :                                                                                                                                                                                                                                                                                                                                                                      tC-CAG-A---TGT---CCG-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAACACG--T-TCATTGTAG-TTT-GTCTGTA-CGACttgtagtttgtctgtacgac
gi|107011                     :          ttttttttacatcagatatagatgaatgcaatgacacaccatcctgtgctcagtaatggccgctgtctgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggaTTTCTTACTACATAGATATAG-ATGA-A-TGC-AA-GACTGTAAAGTCC-G-TGT-GCTCT-GGGAATGGTCGCTG--CCTAAA-TA-GG-CTCGGT-AG-C-TTT-TC--TTGTGTG-TGCA-ACACTGGATGGC-GA-GGACA-GAG-G---TGTTCCGAAAAAGG-T-----ATG--ACG-T----C--AGAG-TCAAAATATTTTTTTTAAAGAA-AC
gi|107011                     :                                                                                                                                                                                                                                                                                                                                                                        tcAG-G---TGT--TCCG-AAAAAGG-T-ATG----AC-G-TC---AGAGTCAAAATATTTTTTTTAAAGAA-AC---T-A-A--GTTA-TTT---TTGCACAAACATTT-CAAAAGCGTGGG-TAGAtaagttatttttgcacaaacatttcaaaagcgtgggtaga
gi|107012                     :     tctttcttactacatagatatagatgaatgcaagactgtaaagtccgtgtgctctgggaatggtcgctgcctaaataggctcggtagcttttcttgtgtgtgcaacactggatggcgaggacagTTTCTTACTACATAGATATAG-ATGA-A-TGCAAA-GACTGTAAAGTCC-G-TGT-GCTCT-GG-AATGGTCGCGC--CATAAA-TA-GAGCTCAGT--A-C-TTT-TC--TTGTG-G-TGCA-ACACTGGATGCG--A-GGA---CAG-AGTGTGTTCCGAAAAAGG-TA----TTG--ACG-T----C--AGAG-TCAA-ATA-----TTT
gi|107012                     :                                                                                                                                                                                                                                                                                                                                                                      tc-CAG-AGTGTGT--TCCG-AAAAAGG-TATTG----AC-G-TC---AGAGTCAA-ATATTTTTTT-AAA-AA-AC---T-AAA--GTTA-TTT---TTGCACAAACATTTTCAAAAGCGTGGG-TAGAttttaaaaaactaaagttatttttgcacaaacattttcaaaagcgtgggtaga
gi|107013                     :         tctttcttactacatagatatagatgaatgcaaagactgtaaagtccgtgtgctctggaatggtcgcgccataaatagagctcagtacttttcttgtggtgcaacactggatgcgaggaTTTTTTTACATCATAGATATAG-ACGA-AATGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGAA-TG-GA-CTT-GT-AA-A--TT-TC--CTGTGAG-TGCACGCGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----TTTAAAGAA-ACGC-TACAT----G-T---TGT--TT---------G-T-CTGTACCAACA-TTTCAAAAGC----ATAGCT-----AGAGAA-A
gi|107013                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGT--TCCG-TGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACGC-T-ACA-TGTTG-TTT-GTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAAAGATTTT--GTG-TT-CCA-C-GAAA--AA--GAAA---GACGAATGAT-ACGTATTT-TAA-ATTATC-TG-AAATATATATTTGACGAAGGCCTCTG-TAATT-TA-T--AATT-TGTAT-AGTAGTG---AA-TATATA--GT-CATGTGCA---AC--TT-GTTCG-TG-TGA--CA----T---AAATTCA-GTT-TG-A-CGTA-TATT-GAAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAAagattttgtgttccacgaaaaagaaagacgaatgatacgtattttaaattatctgaaatatatatttgacgaaggcctctgtaatttataatttgtatagtagtgaatatatagtcatgtgcaacttgttcgtgtgacataaattcagtttgacgtatattgaatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107014                     :         tttttttacatcatagatatagacgaaatgcaagatcataacatccgtgtgctcaggtaatggccgctgtgtgaatggacttgtaaatttcctgtgagtgcacgcgctggatgggaaggTTTTTTTACATCATAGATATAG-ACGA-A-TGC-AA-GATCATAACATCC-G-TGT-GCTCA-GGTAATGGCCGCTG--TGTGGA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCATGAAAGG-T-----CTG--AAA-T----C--AATG-C----ATA-----CTTAAAGAA-ACG--TACNCC-CAG-A---TGT--TCCG-TGAAAGG-T-CTG----AA-A-TC---AATGC----ATATTT-----AAAGAA-ACG--T-ACA-TGTTG-TTT-GTCTGTACCAACATTT-CAAAAGCATAGC-TAGAG-AAA-GATTTT--GTG-TT-CCAAC-GAAA--AG--CAAA---GA---ATGAT-ACGTATTT-TGA-ATTATC-TGAAAATAT-TATTTGATGAAGGCCT-TG-TAATT-TA-TA-AATT-TG--T-AGTAGTG-T-AA-TATATA-TGT-CATGTGCA---AC--TT-GTTCG-TG-T-A--CA----T---AAATTCA-GTT-TGAA-CGTA-TATT-GANN-NN-N-----NNNN-NNNNNNNNNNNNNNNNAATATAATTGAACGTTAGTGGAACCCAGTTG-CA-T-CCAAA-TCCATGTAA
gi|107015                     :                                                                                                                                TCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT-TC--CTGTGAG-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107015                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGT--TCCG-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A-------G-TTT---------------CT-CAAAAGCATAGG-TAGAG-AAA-GATTTT--GTG-TT-TAAAA-GAAA--AA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATC-TGAAAATAT-TATTTGAT---------TG-TGGTT-TA-TA-AATT-TG--T-AGTATTG-TTAA-TATATA-TGT-TGTGTACA---AC--TT-GTTCG-TG-T-A--TG----T---AAATTCA-GTT-CGAA-CGTA-TATT-GCAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CA-T-CCAAATTCCATGTAAgtttctcaaaagcataggtagagaaagattttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaatattatttgattgtggtttataaatttgtagtattgttaatatatatgttgtgtacaacttgttcgtgtatgtaaattcagttcgaacgtatattgcatattgaacgttttagtggaacccagttgcatccaaattccatgtaa
gi|107016                     :         tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaattttcctgtgagtgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATGA-A-TGC-AA-GACCATAAAATTA-G-TGT-GTTCA-GGCAATGGTCGCTG--TGTGAA-TG-GA-CTTGGT-AA-A-TTT--C--CTGTGGA-TGCA-ACGCTGGATGGG-AA-GGACC-CAG-A---TGTTCCGTGAAAGG-T-----CTG--AAA-T----C--AAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107016                     :                                                                                                                                                                                                                                                                                                                                                                     ACC-CAG-A---TGT--TCCG-TGAAAGG-T-CTG----AA-A-TC---AAAGC----ATATTT-----AAAGAA-ACT--T-A-----------------GT-------TCT-CAAAAGCATAGG-TAGAG-AAA-GATTTTT-GTG-TT-TAAAA-GAAA--AA--CAAA---GA---ATGAC-ACATATTT-TAA-ATTATC-TGAAAAAAT-TA-TTGA--------T-TGTTGGTT-T--TA-AATT-TG--T-AGTAGTGTT-AA-TATATA-TGT-T-TGTACA---AC--TT-GTTCG-TG-T-GATTG----T---AAATTCA--TT-CGAA-CGTA-TATT-GCAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcataggtagagaaagatttttgtgtttaaaagaaaaacaaagaatgacacatattttaaattatctgaaaaaattattgattgttggttttaaatttgtagtagtgttaatatatatgtttgtacaacttgttcgtgtgattgtaaattcattcgaacgtatattgcatattgaacgttttagtggaacccagttgcattccaaattccatgtaa
gi|107017                     :          tctttttactacgtagatatagatgaatgcaagaccataaaattagtgtgttcaggcaatggtcgctgtgtgaatggacttggtaaatttcctgtggatgcaacgctggatgggaaggTCTTTTTACTACGTAGATATAG-ATGATA-TGC-AA-GACCATAAAATTA-GGTGT-GTTCAAGGCAATGTCGTCTG--TGTGAA-TGAGA-CTTGGT-AA-AGTTT-TCGTCTGTGAGATGCA-ACGC-GGATGGG-AAAGGACCACAG-A---TGTTCCGTGAAAGGCT-----CTG--AAAAT----CCAAAAG-C----ATA-----TTTAAAGAA-ACT--TA
gi|107017                     :                                                                                                                                                                                                                                                                                                                                                                     ACCACAG-A---TGT--TCCG-TGAAAGGCT-CTG----AA-AATCCA-AAAGC----ATATTT-----AAAGAA-ACT--T-A-----------------GT-------TCT-CAAAAGCATAGCGTAGAG-AAA-GATTTTTTGTG-TT-TAAAAAGAAA--AA--CAAA---GA---ATGACCACATATTT-TAA-ATTATC-TGAAAAAAT-TA-TTGAT------TT-TA-GCGTT-T--TA-AATT-TG--T-AGTAGTGTT-AA-TA-ATA-TGT-T-TGTAC----AC--TT-GTTCGATG-T-G---ATTGTT---AAATTCA--TT-CGAA-CGTA-TATT-GCAA-CT-T-----GAAC-G-TT----------------TAGTGGAA------------CCAGTTG-CATT-CCAAATTCCATGTAAgttctcaaaagcatagcgtagagaaagattttttgtgtttaaaaagaaaaacaaagaatgaccacatattttaaattatctgaaaaaattattgattttagcgttttaaatttgtagtagtgttaataatatgtttgtacacttgttcgatgtgattgttaaattcattcgaacgtatattgcaacttgaacgtttagtggaaccagttgcattccaaattccatgtaa
gi|107018                     : tctttttactacgtagatatagatgatatgcaagaccataaaattaggtgtgttcaaggcaatgtcgtctgtgtgaatgagacttggtaaagttttcgtctgtgagatgcaacgcggatgggaaaggTTTTTCTGCAT---AGATATAG-ATGA-G-TGC-AA-GAACGTGACGTCC-G-TGT-GTTCA-GGGAATGGCCGATG--TTTAAA-TA-GA-CCAGGG-AG-T-TTT-TC--TTGTGAG-TGTA-ATACTGGATGGG-AA-GGACC-GAG-A---TGCACTACGAAAGG-T-----ATG--AAA-TAAGAC--ATAGAC----ATA-----TT---AAAA-ACG--TA
gi|107019                     :                                                                                                                                          TCACAGATATAA-ATGA-G-TGC-GT-AGCAATGCCGTCT-G-CGT-GCTCA-GGAAACGGGCGGTG--TATAAA-CA-GA-C-AGGG-AG-G-TTTCTA--CTGCGTG-TGTG-ACTCTGGCTGGG-AA-GGAGC-GAG-A---TGTTCCATTAAAGG-TACATACTGTAAAA-T----C--Agtaatggttt
gi|107020                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAAGAAGGC---TA-TAATT-AG-TA------TG--T-CATGGTG-G-TA-TATATA-TTT-TGTATG-----AC--TT-CTTC----------------------------------AA-CGTA-TATT-GAAA-AT-TCATTTGAAC--TTT----------------TAGTGAAAC-----------CCAATTGATA-T-TCAAATT-CATGTAA
gi|107021                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             -TG-TAATG-TA-TA-ATTTGTG--T-GGTATTG-TTAA-TACATA-TGT-TGTGTGTACAAACCATT-TTTCG-TG-TTA--CA----T---AAATTCA-ATTATGAA-CGTA-TACT-GCATTATAT-----GAACCGTTT----------------AAGTGAA-------------CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107022                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            -AATT-TG--T-GGTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TG-T-A--CA----T---AAATTCA-ATT-TGAA-CGTA-TATT-GCAT-AT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107023                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            -AATTGTG--TCGGTATTG-TTAA-TACATA-TGT-TGTGTACA---AC--TT-TTTCG-TGGT-A--CA----T---AAATTCA-ATT--GAA-CGTAGTATT-GCATTAT-T-----GAAC-GTTT----------------TAGTGGAAC-----------CCACTTG-CA-T-CCAAATTCCATGTAA
gi|107024                     :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                -TAATTGTA-TGTCATT-TG--T-----GTG-T-A--TATATA-TTT-TGTATG-----AC--TT-CTTCA-CG-T-A--TA----TTGAAAATTCA-ATT-TGAA-C-----------------------------TTT----------------TAGTGAAAC-----------CCAATTG-TA-T-TCAAATTCCATGTAA