lowQualScore : 0 1 0 0 0 0 1 0 0
lowQualScore : . . . . . . . . .
lowQualScore : 4 8 4 4 8 7 3 4 6
consensus : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
Reference ( gi|59590 ) : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59671 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59670 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59669 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59667 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59665 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59663 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59662 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59660 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59659 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59658 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59657 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59655 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59652 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59651 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59647 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59641 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59638 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59679 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATT
gi|59587 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAGC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59586 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTGAAGGC-AGCATTTCGCAAATTCT
gi|59600 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59598 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59597 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCATAAATTCT
gi|59594 : ACAGACAAGTT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59592 : ACAGATAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59589 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59601 : ACAAACAAGTT-GTTGTT-GCAAGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGTATTTCGTAAATTCT
gi|59615 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATT
gi|59617 : ACAAACAAGTT-ATTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTC
gi|59609 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCCCGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59624 : ACAAACAAGGT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59578 : ACAGACAAGTT-GATGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59664 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACATTTAAAGGC-AGCATTTCGCAAATTCT
gi|59642 : ACAGACAAGTT-GTTGTC-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTTGTAAATTCT
gi|59605 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTGAAGAC-AGCATTTCGCAAATTCT
gi|59674 : ACAAACAAGTT-GTTATT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGTATTTCGCAAATTCT
gi|59686 : ACCAATAAGCT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59634 : ACAAACAAGTT-GTTGTT-GCAGGGT-TTTCAAC-AATCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59608 : ACAGACAAGTC-GTTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59630 : ACAAAGAAGTT-GTTGTT-GCAGGGG-TTTCAAT-AGTCACGTTTAAAGGC-AGCATTTTGTAAATTCT
gi|59585 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTCAAAGGC-AGCATTTTGCAAATTCT
gi|59611 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTTGCAAATT
gi|59616 : ACAAACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCATGTTTAAAGGC-AGCATTTCGCAAATT
gi|59683 : ACAGACAAGTT-GTTGTTTGCAGGGG-TTTCAAC-AGTCACGTTTAAAGTC-AGCATTTCGTAAATTC
gi|59636 : ACAAACAAGTT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-ACCATTTCGCAAATT
gi|59620 : ACAAACAAGTT-GCTTTT-GTAAGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59622 : ACAAACAAGTT-GTTGTT-GCAGGAG-TTTCAAT-AGTCACGTTTAAAGTC-AGCATTTCGCAAATTTT
gi|59682 : ACAAACAAGTT-GTTGTT-GCCGGGG-TTTCAAC-AGCCGCATTTAAAGGC-AGCATTTCACAAATTCT
gi|59582 : ACAAACAAGTT-GTTGCT-ACAGGGG-TTTCAAC-AGTCACGATTAAAGAC-AGCATTTTGCAAATTCT
gi|59562 : ACAAACAAGTT-GATGTT-GCAGGGG-TTTCAAA-AGTCACGTTTAAAGTC-AGCACTTCGCAAATTCT
gi|59629 : ACTAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTACAGAC-AGCATTTCGCAAATTCT
gi|59548 : ACAAACAAGTT-GATGTT-ACAGGGA-TTTCAAC-AGTCTCGTTTAAAGTC-AGCATTTCGTAAATTCT
gi|59681 : ACAAACAATTT-GTTGTT-GCATGGG-TTTCAAC-AGTCACGTTTAAAGTC-ATCATTTCGCAAATTCT
gi|59570 : ACAAACAAGTT-G---TT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59625 : ACAAACAAGTT-ATTGTT-ACAGGG--TTTCAAC-AGTCACGTTTAAA-GC-AGCATTTCGCAAATTCT
gi|59684 : ACAAACAAGTT-G-------CAGGGG-TTTCAAC-AGTCTCGTTTAAAGGC-AGCATTTCGCAAATTC
gi|59554 : ACAAACAAGTT-GATGTT-ACAGGG--TTTCAAC-AGTCTCGTTTAAAGTC-AACATTTTGTAAATTCT
gi|59566 : ACAAACAAGTT-GATGTT-GCAGAGG-TTTCAAC-AGTCTCATTTAAAGTT-AGCAATTCGCAAATTCT
gi|59596 : ACAAACAAGTT-GTTGCT-TCAGGG--TTTCAAC-AGTCCCGTTTAAAGTC-AGCATTTCGCAAAT
gi|59579 : ACAAATAAGTT-TATGCT-GCAGAGG-TTTCAAC-AGTCACGTTTAAAGCC-AGCATTTTGCAAGTTCT
gi|59552 : ACAAACAAGTT-GATGTT-ACAGGGA-TTTGAAC-AGTCTTGTTTAAAGTC-AGCATTTCGCAAATTC
gi|59661 : ACAAACAAGTTTGATGCT-ACAGGAG-TTTGAAC-AGTCACGTTTAAAGTC-AGCATTCCGCAAATTCT
gi|59677 : ACAAGCAAGTT-GATGTT-G-AGGGG-TTTCAAC-AGCCACATTTAAAGTC-GGCATTTTGCAAATTCT
gi|59618 : ACGAACAAGTT-AATGTT-ACAGGGG-TTTCAAC-AGTCTCATTTAAAGTC-AACATTTCGTAAA
gi|59607 : ACAAACAAGTT-ATTGTT-GCTAAAA-TTTCAAC-AGTCTCGTTCAAAGAC-AGCATTTCACAAATTCT
gi|59560 : ACAAACAAGTT-GATGTT-ACTGGGG-TTTCAAC-AGTCTCGTTTAAAGTC-AGCGTTTCTCAAATT
gi|59675 : ACAAACAAGTT-GATGTT-GAAAGGG-TTTCAAC-TGTCGCGTTTGAAGTC-TGCATTTCGCAAATTC
gi|59633 : ACAAACAAGTT-GTTGT----AGGGG-TTTCCAC-AGTCTCGGTTAAAGTC-AGCATTTTGCAAATTCT
gi|59576 : ACAAACAAGTT-GATGTT-ACAGGGT-TTTCAAC-AATCTCGTTGAAAATC-AGCATTTCGGAAATTCT
gi|59559 : ACTAACAAGTT-GATGTT-ACAAGGA-TTTCAAC-AGTCATGTTTAAAGTC-GGCATTTTGAAAATTCT
gi|59678 : ACAAACAAGTT-GAAATT-GCAAGGG-TTTCAAC-AGTCCTATTTAAAGGC-AGCGCTTTGCAAATTCT
gi|59561 : ACAAACAATTT-GATTTT-GCAAGGG-TTTCAAC-ATTCTTGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59557 : ACATATAAGTT-GATGTT-ACAGGGG-TTTCAAT-AGTCTTGTTTAAAGTC-AGCATTTCACAAAT
gi|59614 : ACAAACAAGGT-GATGTT-ACAAGGT-TTTCATC-AATCACGTTTAAAGTC-AGCATTTGGCAAGTTCT
gi|59580 : ACAAAAAAGTT-GATGTT-GCA-GGG-TTCTAACGAATCTCGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59595 : ACAAACAGGTT-GATGTT-ACAGGGG-TTTCAAT-AGACTCGTTTAAAATC-ATCATTTTGCAAATGCT
gi|59553 : ACAAACATGCT-GATGTT-ACAGGG--CTTCAAC-ACTTTCGTTTAAAGTC-AGCATTTCGCAAATCCT
gi|59632 : ACAAACAAGTT-GATGTT-ACAGTGG-TTTCGAC-AGTCTCATTTGAAGTC-AAAATTTCACAAATT
gi|59558 : ACAAATAAATT-GATGTT-ATAAGGG-TTTCAAT-AGTCTCGTTCAAAGTT-TGCATTTCACAAATTCT
gi|59676 : ATAAATAAAAT-GATGTT-ACAGGGGGTTTCAAC-AGTCTCATTTAAAGTC-AGCATTTCGCAA
gi|59685 : ACAAACAAATT-GATGCT-ATAGGAG-TTTGAAC-ATTCTCGTTTAAAGTC-AGTATTTTGCAAATTTT
gi|59577 : ACAAATAAGTT-AATGTT-ACAGAGG-TTTCAAC-AGTCTCATATAAATTC-AGTATTTTACCAATTCT
gi|59564 : ACCAATACGTT-CATGTT-ACAGGGA-TTTCACG-AGTCTCGTTTAAAGTC-AGCATTTTCCAAATTCT
gi|59895 : CAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59889 : CAAATAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAAGC-AGCATTTCGCGAATTCT
gi|59888 : CAAACAAATT-ATTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTTT
gi|59892 : CAACCAAGTT-GTTGTT-GCAGGAA-TTTCAAC-GGTCACGTTTAAAGGC-AGCATTTTGCAAATTCT
gi|59886 : CAAATAAGTT-GATGTT-ACAGGGG-TTTCAAC-AGTCACGATTTAAGCC-AGCATTTTGCAAATT
gi|59884 : CAAACTAGTT-GATGTT-ATAGGGA-TTTCCGC-AGTCTCGCTTAAAGTC-AGCATTTCACAAATTCT
gi|59893 : CAAAAAAGTT-GATGTT-GCA-GGG-TTACAACGAATCTCGTTTAAAGTC-ACCATTTTGCAAATTCT
gi|59890 : CAAATAGGTT-GATGTT-ACAGGGA-TTTCAAC-AATTTTGTCTCAATTC-AGCATTTTGCAATTTCT
gi|59938 : AAATAAGTT-GTTGTT-GCAAGGG-TTTCAAC-AGTCAAATTTATAGTC-GGCATTTTGCAAATTCT
gi|59933 : AAATAAGTT-GATGTT-ACAGGGA-TTTTAAC-AGCCTCGTTTGAAGTC-AGCATTTCGCAAATTTT
gi|59940 : AAATAAGGT-GGTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTATAGTC-AGCATGTTGCAAGTTTT
gi|59941 : AAATAATTT-GATGTT-ACGGAGA-TTTCAAC-AGTCTCATTTAAAAGTAAACATTTCGCAAATTCT
gi|59939 : AAACAAATT-AAAGTT-ACAAGGG-TCTCAAA-AGTCTCGTTTAAAATC-AGCATTTTGCAAATT
gi|59963 : ACAAATC-GATGTC-AAAGGGG-TTTCAAC-AGTCTCGTTTAAAGTC-AGCATTTCACAAATTCT
gi|59970 : AAGTT-GATTTT-ACAGGA--TTTCAAC-AGTCTTGTTTAAATTC-AGCATTTTACAAATT
gi|59937 : t-GTTGTT-ACAGGGA-TTTCAAT-AGTCTCGTTTGAAGTC-AGCATTTCGCAAACTCT
Alignments
lowQualScore : 0 1 0 0 0 0 1 0
lowQualScore : . . . . . . . .
lowQualScore : 4 7 4 4 8 6 1 4
consensus : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
Reference ( family-76 ) : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59548 : ACAAACAAGTT-GATGTT-ACAGGGA-TTTCAAC-AGTCTCGTTTAAAGTC-AGCATTTCGTAAATTCT
gi|59552 : ACAAACAAGTT-GATGTT-ACAGGGA-TTTGAAC-AGTCTTGTTTAAAGTC-AGCATTTCGCAAATTC
gi|59553 : ACAAACATGCT-GATGTT-ACAGGG--CTTCAAC-ACTTTCGTTTAAAGTC-AGCATTTCGCAAATCCT
gi|59554 : ACAAACAAGTT-GATGTT-ACAGGG--TTTCAAC-AGTCTCGTTTAAAGTC-AACATTTTGTAAATTCT
gi|59557 : ACATATAAGTT-GATGTT-ACAGGGG-TTTCAAT-AGTCTTGTTTAAAGTC-AGCATTTCACAAAT
gi|59558 : ACAAATAAATT-GATGTT-ATAAGGG-TTTCAAT-AGTCTCGTTCAAAGTT-TGCATTTCACAAATTCT
gi|59559 : ACTAACAAGTT-GATGTT-ACAAGGA-TTTCAAC-AGTCATGTTTAAAGTC-GGCATTTTGAAAATTCT
gi|59560 : ACAAACAAGTT-GATGTT-ACTGGGG-TTTCAAC-AGTCTCGTTTAAAGTC-AGCGTTTCTCAAATT
gi|59561 : ACAAACAATTT-GATTTT-GCAAGGG-TTTCAAC-ATTCTTGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59562 : ACAAACAAGTT-GATGTT-GCAGGGG-TTTCAAA-AGTCACGTTTAAAGTC-AGCACTTCGCAAATTCT
gi|59564 : ACCAATACGTT-CATGTT-ACAGGGA-TTTCACG-AGTCTCGTTTAAAGTC-AGCATTTTCCAAATTCT
gi|59566 : ACAAACAAGTT-GATGTT-GCAGAGG-TTTCAAC-AGTCTCATTTAAAGTT-AGCAATTCGCAAATTCT
gi|59570 : ACAAACAAGTT-G---TT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59576 : ACAAACAAGTT-GATGTT-ACAGGGT-TTTCAAC-AATCTCGTTGAAAATC-AGCATTTCGGAAATTCT
gi|59577 : ACAAATAAGTT-AATGTT-ACAGAGG-TTTCAAC-AGTCTCATATAAATTC-AGTATTTTACCAATTCT
gi|59578 : ACAGACAAGTT-GATGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59579 : ACAAATAAGTT-TATGCT-GCAGAGG-TTTCAAC-AGTCACGTTTAAAGCC-AGCATTTTGCAAGTTCT
gi|59580 : ACAAAAAAGTT-GATGTT-GCA-GGG-TTCTAACGAATCTCGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59582 : ACAAACAAGTT-GTTGCT-ACAGGGG-TTTCAAC-AGTCACGATTAAAGAC-AGCATTTTGCAAATTCT
gi|59585 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTCAAAGGC-AGCATTTTGCAAATTCT
gi|59586 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTGAAGGC-AGCATTTCGCAAATTCT
gi|59587 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAGC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59589 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59590 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59592 : ACAGATAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59594 : ACAGACAAGTT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59595 : ACAAACAGGTT-GATGTT-ACAGGGG-TTTCAAT-AGACTCGTTTAAAATC-ATCATTTTGCAAATGCT
gi|59596 : ACAAACAAGTT-GTTGCT-TCAGGG--TTTCAAC-AGTCCCGTTTAAAGTC-AGCATTTCGCAAAT
gi|59597 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCATAAATTCT
gi|59598 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59600 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59601 : ACAAACAAGTT-GTTGTT-GCAAGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGTATTTCGTAAATTCT
gi|59605 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTGAAGAC-AGCATTTCGCAAATTCT
gi|59607 : ACAAACAAGTT-ATTGTT-GCTAAAA-TTTCAAC-AGTCTCGTTCAAAGAC-AGCATTTCACAAATTCT
gi|59608 : ACAGACAAGTC-GTTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59609 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCCCGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59611 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTTGCAAATT
gi|59614 : ACAAACAAGGT-GATGTT-ACAAGGT-TTTCATC-AATCACGTTTAAAGTC-AGCATTTGGCAAGTTCT
gi|59615 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATT
gi|59616 : ACAAACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCATGTTTAAAGGC-AGCATTTCGCAAATT
gi|59617 : ACAAACAAGTT-ATTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTC
gi|59618 : ACGAACAAGTT-AATGTT-ACAGGGG-TTTCAAC-AGTCTCATTTAAAGTC-AACATTTCGTAAA
gi|59620 : ACAAACAAGTT-GCTTTT-GTAAGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59622 : ACAAACAAGTT-GTTGTT-GCAGGAG-TTTCAAT-AGTCACGTTTAAAGTC-AGCATTTCGCAAATTTT
gi|59624 : ACAAACAAGGT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59625 : ACAAACAAGTT-ATTGTT-ACAGGG--TTTCAAC-AGTCACGTTTAAA-GC-AGCATTTCGCAAATTCT
gi|59629 : ACTAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTACAGAC-AGCATTTCGCAAATTCT
gi|59630 : ACAAAGAAGTT-GTTGTT-GCAGGGG-TTTCAAT-AGTCACGTTTAAAGGC-AGCATTTTGTAAATTCT
gi|59632 : ACAAACAAGTT-GATGTT-ACAGTGG-TTTCGAC-AGTCTCATTTGAAGTC-AAAATTTCACAAATT
gi|59633 : ACAAACAAGTT-GTTGT----AGGGG-TTTCCAC-AGTCTCGGTTAAAGTC-AGCATTTTGCAAATTCT
gi|59634 : ACAAACAAGTT-GTTGTT-GCAGGGT-TTTCAAC-AATCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59636 : ACAAACAAGTT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-ACCATTTCGCAAATT
gi|59638 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59641 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59642 : ACAGACAAGTT-GTTGTC-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTTGTAAATTCT
gi|59647 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59651 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59652 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59655 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59657 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59658 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59659 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59660 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59661 : ACAAACAAGTTTGATGCT-ACAGGAG-TTTGAAC-AGTCACGTTTAAAGTC-AGCATTCCGCAAATTCT
gi|59662 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59663 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59664 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACATTTAAAGGC-AGCATTTCGCAAATTCT
gi|59665 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59667 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59669 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59670 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59671 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59674 : ACAAACAAGTT-GTTATT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGTATTTCGCAAATTCT
gi|59675 : ACAAACAAGTT-GATGTT-GAAAGGG-TTTCAAC-TGTCGCGTTTGAAGTC-TGCATTTCGCAAATTC
gi|59676 : ATAAATAAAAT-GATGTT-ACAGGGGGTTTCAAC-AGTCTCATTTAAAGTC-AGCATTTCGCAA
gi|59677 : ACAAGCAAGTT-GATGTT-G-AGGGG-TTTCAAC-AGCCACATTTAAAGTC-GGCATTTTGCAAATTCT
gi|59678 : ACAAACAAGTT-GAAATT-GCAAGGG-TTTCAAC-AGTCCTATTTAAAGGC-AGCGCTTTGCAAATTCT
gi|59679 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATT
gi|59681 : ACAAACAATTT-GTTGTT-GCATGGG-TTTCAAC-AGTCACGTTTAAAGTC-ATCATTTCGCAAATTCT
gi|59682 : ACAAACAAGTT-GTTGTT-GCCGGGG-TTTCAAC-AGCCGCATTTAAAGGC-AGCATTTCACAAATTCT
gi|59683 : ACAGACAAGTT-GTTGTTTGCAGGGG-TTTCAAC-AGTCACGTTTAAAGTC-AGCATTTCGTAAATTC
gi|59684 : ACAAACAAGTT-G-------CAGGGG-TTTCAAC-AGTCTCGTTTAAAGGC-AGCATTTCGCAAATTC
gi|59685 : ACAAACAAATT-GATGCT-ATAGGAG-TTTGAAC-ATTCTCGTTTAAAGTC-AGTATTTTGCAAATTTT
gi|59686 : ACCAATAAGCT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59884 : CAAACTAGTT-GATGTT-ATAGGGA-TTTCCGC-AGTCTCGCTTAAAGTC-AGCATTTCACAAATTCT
gi|59886 : CAAATAAGTT-GATGTT-ACAGGGG-TTTCAAC-AGTCACGATTTAAGCC-AGCATTTTGCAAATT
gi|59888 : CAAACAAATT-ATTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTTT
gi|59889 : CAAATAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAAGC-AGCATTTCGCGAATTCT
gi|59890 : CAAATAGGTT-GATGTT-ACAGGGA-TTTCAAC-AATTTTGTCTCAATTC-AGCATTTTGCAATTTCT
gi|59892 : CAACCAAGTT-GTTGTT-GCAGGAA-TTTCAAC-GGTCACGTTTAAAGGC-AGCATTTTGCAAATTCT
gi|59893 : CAAAAAAGTT-GATGTT-GCA-GGG-TTACAACGAATCTCGTTTAAAGTC-ACCATTTTGCAAATTCT
gi|59895 : CAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59933 : AAATAAGTT-GATGTT-ACAGGGA-TTTTAAC-AGCCTCGTTTGAAGTC-AGCATTTCGCAAATTTT
gi|59937 : -GTTGTT-ACAGGGA-TTTCAAT-AGTCTCGTTTGAAGTC-AGCATTTCGCAAACTCT
gi|59938 : aaattaaAAATAAGTT-GTTGTT-GCAAGGG-TTTCAAC-AGTCAAATTTATAGTC-GGCATTTTGCAAATTCT
gi|59939 : AAACAAATT-AAAGTT-ACAAGGG-TCTCAAA-AGTCTCGTTTAAAATC-AGCATTTTGCAAATT
gi|59940 : AAATAAGGT-GGTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTATAGTC-AGCATGTTGCAAGTTTT
gi|59941 : AAATAATTT-GATGTT-ACGGAGA-TTTCAAC-AGTCTCATTTAAAAGTAAACATTTCGCAAATTCT
gi|59963 : ACAAATC-GATGTC-AAAGGGG-TTTCAAC-AGTCTCGTTTAAAGTC-AGCATTTCACAAATTCT
gi|59970 : AAGTT-GATTTT-ACAGGA--TTTCAAC-AGTCTTGTTTAAATTC-AGCATTTTACAAATT
Alignments
lowQualScore : 0 1 0 0 0 0 1 0
lowQualScore : . . . . . . . .
lowQualScore : 4 7 4 4 8 6 1 4
consensus : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
Reference ( family-76 ) : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59548 : ACAAACAAGTT-GATGTT-ACAGGGA-TTTCAAC-AGTCTCGTTTAAAGTC-AGCATTTCGTAAATTCT
gi|59552 : ACAAACAAGTT-GATGTT-ACAGGGA-TTTGAAC-AGTCTTGTTTAAAGTC-AGCATTTCGCAAATTC
gi|59553 : ACAAACATGCT-GATGTT-ACAGGG--CTTCAAC-ACTTTCGTTTAAAGTC-AGCATTTCGCAAATCCT
gi|59554 : ACAAACAAGTT-GATGTT-ACAGGG--TTTCAAC-AGTCTCGTTTAAAGTC-AACATTTTGTAAATTCT
gi|59557 : ACATATAAGTT-GATGTT-ACAGGGG-TTTCAAT-AGTCTTGTTTAAAGTC-AGCATTTCACAAAT
gi|59558 : ACAAATAAATT-GATGTT-ATAAGGG-TTTCAAT-AGTCTCGTTCAAAGTT-TGCATTTCACAAATTCT
gi|59559 : ACTAACAAGTT-GATGTT-ACAAGGA-TTTCAAC-AGTCATGTTTAAAGTC-GGCATTTTGAAAATTCT
gi|59560 : ACAAACAAGTT-GATGTT-ACTGGGG-TTTCAAC-AGTCTCGTTTAAAGTC-AGCGTTTCTCAAATT
gi|59561 : ACAAACAATTT-GATTTT-GCAAGGG-TTTCAAC-ATTCTTGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59562 : ACAAACAAGTT-GATGTT-GCAGGGG-TTTCAAA-AGTCACGTTTAAAGTC-AGCACTTCGCAAATTCT
gi|59564 : ACCAATACGTT-CATGTT-ACAGGGA-TTTCACG-AGTCTCGTTTAAAGTC-AGCATTTTCCAAATTCT
gi|59566 : ACAAACAAGTT-GATGTT-GCAGAGG-TTTCAAC-AGTCTCATTTAAAGTT-AGCAATTCGCAAATTCT
gi|59570 : ACAAACAAGTT-G---TT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59576 : ACAAACAAGTT-GATGTT-ACAGGGT-TTTCAAC-AATCTCGTTGAAAATC-AGCATTTCGGAAATTCT
gi|59577 : ACAAATAAGTT-AATGTT-ACAGAGG-TTTCAAC-AGTCTCATATAAATTC-AGTATTTTACCAATTCT
gi|59578 : ACAGACAAGTT-GATGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59579 : ACAAATAAGTT-TATGCT-GCAGAGG-TTTCAAC-AGTCACGTTTAAAGCC-AGCATTTTGCAAGTTCT
gi|59580 : ACAAAAAAGTT-GATGTT-GCA-GGG-TTCTAACGAATCTCGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59582 : ACAAACAAGTT-GTTGCT-ACAGGGG-TTTCAAC-AGTCACGATTAAAGAC-AGCATTTTGCAAATTCT
gi|59585 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTCAAAGGC-AGCATTTTGCAAATTCT
gi|59586 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTGAAGGC-AGCATTTCGCAAATTCT
gi|59587 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAGC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59589 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59590 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59592 : ACAGATAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59594 : ACAGACAAGTT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59595 : ACAAACAGGTT-GATGTT-ACAGGGG-TTTCAAT-AGACTCGTTTAAAATC-ATCATTTTGCAAATGCT
gi|59596 : ACAAACAAGTT-GTTGCT-TCAGGG--TTTCAAC-AGTCCCGTTTAAAGTC-AGCATTTCGCAAAT
gi|59597 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCATAAATTCT
gi|59598 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59600 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59601 : ACAAACAAGTT-GTTGTT-GCAAGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGTATTTCGTAAATTCT
gi|59605 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTGAAGAC-AGCATTTCGCAAATTCT
gi|59607 : ACAAACAAGTT-ATTGTT-GCTAAAA-TTTCAAC-AGTCTCGTTCAAAGAC-AGCATTTCACAAATTCT
gi|59608 : ACAGACAAGTC-GTTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59609 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCCCGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59611 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTTGCAAATT
gi|59614 : ACAAACAAGGT-GATGTT-ACAAGGT-TTTCATC-AATCACGTTTAAAGTC-AGCATTTGGCAAGTTCT
gi|59615 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATT
gi|59616 : ACAAACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCATGTTTAAAGGC-AGCATTTCGCAAATT
gi|59617 : ACAAACAAGTT-ATTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTC
gi|59618 : ACGAACAAGTT-AATGTT-ACAGGGG-TTTCAAC-AGTCTCATTTAAAGTC-AACATTTCGTAAA
gi|59620 : ACAAACAAGTT-GCTTTT-GTAAGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59622 : ACAAACAAGTT-GTTGTT-GCAGGAG-TTTCAAT-AGTCACGTTTAAAGTC-AGCATTTCGCAAATTTT
gi|59624 : ACAAACAAGGT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59625 : ACAAACAAGTT-ATTGTT-ACAGGG--TTTCAAC-AGTCACGTTTAAA-GC-AGCATTTCGCAAATTCT
gi|59629 : ACTAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTACAGAC-AGCATTTCGCAAATTCT
gi|59630 : ACAAAGAAGTT-GTTGTT-GCAGGGG-TTTCAAT-AGTCACGTTTAAAGGC-AGCATTTTGTAAATTCT
gi|59632 : ACAAACAAGTT-GATGTT-ACAGTGG-TTTCGAC-AGTCTCATTTGAAGTC-AAAATTTCACAAATT
gi|59633 : ACAAACAAGTT-GTTGT----AGGGG-TTTCCAC-AGTCTCGGTTAAAGTC-AGCATTTTGCAAATTCT
gi|59634 : ACAAACAAGTT-GTTGTT-GCAGGGT-TTTCAAC-AATCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59636 : ACAAACAAGTT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-ACCATTTCGCAAATT
gi|59638 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59641 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59642 : ACAGACAAGTT-GTTGTC-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTTGTAAATTCT
gi|59647 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59651 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59652 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59655 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59657 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59658 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59659 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59660 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59661 : ACAAACAAGTTTGATGCT-ACAGGAG-TTTGAAC-AGTCACGTTTAAAGTC-AGCATTCCGCAAATTCT
gi|59662 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59663 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59664 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACATTTAAAGGC-AGCATTTCGCAAATTCT
gi|59665 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59667 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59669 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59670 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59671 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59674 : ACAAACAAGTT-GTTATT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGTATTTCGCAAATTCT
gi|59675 : ACAAACAAGTT-GATGTT-GAAAGGG-TTTCAAC-TGTCGCGTTTGAAGTC-TGCATTTCGCAAATTC
gi|59676 : ATAAATAAAAT-GATGTT-ACAGGGGGTTTCAAC-AGTCTCATTTAAAGTC-AGCATTTCGCAA
gi|59677 : ACAAGCAAGTT-GATGTT-G-AGGGG-TTTCAAC-AGCCACATTTAAAGTC-GGCATTTTGCAAATTCT
gi|59678 : ACAAACAAGTT-GAAATT-GCAAGGG-TTTCAAC-AGTCCTATTTAAAGGC-AGCGCTTTGCAAATTCT
gi|59679 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATT
gi|59681 : ACAAACAATTT-GTTGTT-GCATGGG-TTTCAAC-AGTCACGTTTAAAGTC-ATCATTTCGCAAATTCT
gi|59682 : ACAAACAAGTT-GTTGTT-GCCGGGG-TTTCAAC-AGCCGCATTTAAAGGC-AGCATTTCACAAATTCT
gi|59683 : ACAGACAAGTT-GTTGTTTGCAGGGG-TTTCAAC-AGTCACGTTTAAAGTC-AGCATTTCGTAAATTC
gi|59684 : ACAAACAAGTT-G-------CAGGGG-TTTCAAC-AGTCTCGTTTAAAGGC-AGCATTTCGCAAATTC
gi|59685 : ACAAACAAATT-GATGCT-ATAGGAG-TTTGAAC-ATTCTCGTTTAAAGTC-AGTATTTTGCAAATTTT
gi|59686 : ACCAATAAGCT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59884 : CAAACTAGTT-GATGTT-ATAGGGA-TTTCCGC-AGTCTCGCTTAAAGTC-AGCATTTCACAAATTCT
gi|59886 : CAAATAAGTT-GATGTT-ACAGGGG-TTTCAAC-AGTCACGATTTAAGCC-AGCATTTTGCAAATT
gi|59888 : CAAACAAATT-ATTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTTT
gi|59889 : CAAATAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAAGC-AGCATTTCGCGAATTCT
gi|59890 : CAAATAGGTT-GATGTT-ACAGGGA-TTTCAAC-AATTTTGTCTCAATTC-AGCATTTTGCAATTTCT
gi|59892 : CAACCAAGTT-GTTGTT-GCAGGAA-TTTCAAC-GGTCACGTTTAAAGGC-AGCATTTTGCAAATTCT
gi|59893 : CAAAAAAGTT-GATGTT-GCA-GGG-TTACAACGAATCTCGTTTAAAGTC-ACCATTTTGCAAATTCT
gi|59895 : CAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59933 : AAATAAGTT-GATGTT-ACAGGGA-TTTTAAC-AGCCTCGTTTGAAGTC-AGCATTTCGCAAATTTT
gi|59937 : -GTTGTT-ACAGGGA-TTTCAAT-AGTCTCGTTTGAAGTC-AGCATTTCGCAAACTCT
gi|59938 : aaattaaAAATAAGTT-GTTGTT-GCAAGGG-TTTCAAC-AGTCAAATTTATAGTC-GGCATTTTGCAAATTCT
gi|59939 : AAACAAATT-AAAGTT-ACAAGGG-TCTCAAA-AGTCTCGTTTAAAATC-AGCATTTTGCAAATT
gi|59940 : AAATAAGGT-GGTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTATAGTC-AGCATGTTGCAAGTTTT
gi|59941 : AAATAATTT-GATGTT-ACGGAGA-TTTCAAC-AGTCTCATTTAAAAGTAAACATTTCGCAAATTCT
gi|59963 : ACAAATC-GATGTC-AAAGGGG-TTTCAAC-AGTCTCGTTTAAAGTC-AGCATTTCACAAATTCT
gi|59970 : AAGTT-GATTTT-ACAGGA--TTTCAAC-AGTCTTGTTTAAATTC-AGCATTTTACAAATT
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A G
blockSeqs : A C
blockSeqs : T T
blockSeqs : T A
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : A G
blockSeqs : T T
blockSeqs : T T
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T A
blockSeqs : T A
blockSeqs : T G
blockSeqs : T G
blockSeqs : A G
blockSeqs : T T
blockSeqs : T G
blockSeqs : T G
blockSeqs : A G
blockSeqs : C T
blockSeqs : T G
blockSeqs : T T
blockSeqs : T G
blockSeqs : T G
blockSeqs : T A
blockSeqs : A G
blockSeqs : T T
blockSeqs : T T
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : A G
blockSeqs : T T
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : T G
blockSeqs : A G
blockSeqs : A T
blockSeqs : A T
blockSeqs : A T
blockSeqs : T G
blockSeqs : T G
blockSeqs : T T
blockSeqs : T G
blockSeqs : A T
blockSeqs : T G
blockSeqs : A T
blockSeqs : A G
blockSeqs : T T
blockSeqs : T C
blockSeqs : A G
blockSeqs : T G
blockSeqs : A T
blockSeqs : T G
blockSeqs : A T
blockSeqs : T G
blockSeqs : T T
blockSeqs : A T
blockSeqs : G T
blockSeqs : A T
blockSeqs : A T
blockSeqs : A G
blockSeqs : . T
blockSeqs : . T
blockSeqCons :
originalCons : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
finalCons : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
Alignments
lowQualScore : 0 1 0 0 0 0 1 0
lowQualScore : . . . . . . . .
lowQualScore : 4 7 4 4 8 6 1 4
consensus : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
Reference ( family-76 ) : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59548 : ACAAACAAGTT-GATGTT-ACAGGGA-TTTCAAC-AGTCTCGTTTAAAGTC-AGCATTTCGTAAATTCT
gi|59552 : ACAAACAAGTT-GATGTT-ACAGGGA-TTTGAAC-AGTCTTGTTTAAAGTC-AGCATTTCGCAAATTC
gi|59553 : ACAAACATGCT-GATGTT-ACAGGG--CTTCAAC-ACTTTCGTTTAAAGTC-AGCATTTCGCAAATCCT
gi|59554 : ACAAACAAGTT-GATGTT-ACAGGG--TTTCAAC-AGTCTCGTTTAAAGTC-AACATTTTGTAAATTCT
gi|59557 : ACATATAAGTT-GATGTT-ACAGGGG-TTTCAAT-AGTCTTGTTTAAAGTC-AGCATTTCACAAAT
gi|59558 : ACAAATAAATT-GATGTT-ATAAGGG-TTTCAAT-AGTCTCGTTCAAAGTT-TGCATTTCACAAATTCT
gi|59559 : ACTAACAAGTT-GATGTT-ACAAGGA-TTTCAAC-AGTCATGTTTAAAGTC-GGCATTTTGAAAATTCT
gi|59560 : ACAAACAAGTT-GATGTT-ACTGGGG-TTTCAAC-AGTCTCGTTTAAAGTC-AGCGTTTCTCAAATT
gi|59561 : ACAAACAATTT-GATTTT-GCAAGGG-TTTCAAC-ATTCTTGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59562 : ACAAACAAGTT-GATGTT-GCAGGGG-TTTCAAA-AGTCACGTTTAAAGTC-AGCACTTCGCAAATTCT
gi|59564 : ACCAATACGTT-CATGTT-ACAGGGA-TTTCACG-AGTCTCGTTTAAAGTC-AGCATTTTCCAAATTCT
gi|59566 : ACAAACAAGTT-GATGTT-GCAGAGG-TTTCAAC-AGTCTCATTTAAAGTT-AGCAATTCGCAAATTCT
gi|59570 : ACAAACAAGTT-G---TT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59576 : ACAAACAAGTT-GATGTT-ACAGGGT-TTTCAAC-AATCTCGTTGAAAATC-AGCATTTCGGAAATTCT
gi|59577 : ACAAATAAGTT-AATGTT-ACAGAGG-TTTCAAC-AGTCTCATATAAATTC-AGTATTTTACCAATTCT
gi|59578 : ACAGACAAGTT-GATGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59579 : ACAAATAAGTT-TATGCT-GCAGAGG-TTTCAAC-AGTCACGTTTAAAGCC-AGCATTTTGCAAGTTCT
gi|59580 : ACAAAAAAGTT-GATGTT-GCA-GGG-TTCTAACGAATCTCGTTTAAAGTC-AGCATTTTGCAAATTCT
gi|59582 : ACAAACAAGTT-GTTGCT-ACAGGGG-TTTCAAC-AGTCACGATTAAAGAC-AGCATTTTGCAAATTCT
gi|59585 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTCAAAGGC-AGCATTTTGCAAATTCT
gi|59586 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTGAAGGC-AGCATTTCGCAAATTCT
gi|59587 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAGC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59589 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59590 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59592 : ACAGATAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59594 : ACAGACAAGTT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59595 : ACAAACAGGTT-GATGTT-ACAGGGG-TTTCAAT-AGACTCGTTTAAAATC-ATCATTTTGCAAATGCT
gi|59596 : ACAAACAAGTT-GTTGCT-TCAGGG--TTTCAAC-AGTCCCGTTTAAAGTC-AGCATTTCGCAAAT
gi|59597 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCATAAATTCT
gi|59598 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59600 : ACAGACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59601 : ACAAACAAGTT-GTTGTT-GCAAGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGTATTTCGTAAATTCT
gi|59605 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTGAAGAC-AGCATTTCGCAAATTCT
gi|59607 : ACAAACAAGTT-ATTGTT-GCTAAAA-TTTCAAC-AGTCTCGTTCAAAGAC-AGCATTTCACAAATTCT
gi|59608 : ACAGACAAGTC-GTTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59609 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCCCGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59611 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTTGCAAATT
gi|59614 : ACAAACAAGGT-GATGTT-ACAAGGT-TTTCATC-AATCACGTTTAAAGTC-AGCATTTGGCAAGTTCT
gi|59615 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATT
gi|59616 : ACAAACAAGTT-GTTGTT-ACAGGGG-TTTCAAC-AGTCATGTTTAAAGGC-AGCATTTCGCAAATT
gi|59617 : ACAAACAAGTT-ATTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTC
gi|59618 : ACGAACAAGTT-AATGTT-ACAGGGG-TTTCAAC-AGTCTCATTTAAAGTC-AACATTTCGTAAA
gi|59620 : ACAAACAAGTT-GCTTTT-GTAAGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59622 : ACAAACAAGTT-GTTGTT-GCAGGAG-TTTCAAT-AGTCACGTTTAAAGTC-AGCATTTCGCAAATTTT
gi|59624 : ACAAACAAGGT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59625 : ACAAACAAGTT-ATTGTT-ACAGGG--TTTCAAC-AGTCACGTTTAAA-GC-AGCATTTCGCAAATTCT
gi|59629 : ACTAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTACAGAC-AGCATTTCGCAAATTCT
gi|59630 : ACAAAGAAGTT-GTTGTT-GCAGGGG-TTTCAAT-AGTCACGTTTAAAGGC-AGCATTTTGTAAATTCT
gi|59632 : ACAAACAAGTT-GATGTT-ACAGTGG-TTTCGAC-AGTCTCATTTGAAGTC-AAAATTTCACAAATT
gi|59633 : ACAAACAAGTT-GTTGT----AGGGG-TTTCCAC-AGTCTCGGTTAAAGTC-AGCATTTTGCAAATTCT
gi|59634 : ACAAACAAGTT-GTTGTT-GCAGGGT-TTTCAAC-AATCACGTTTAAAGGC-AGCATTTCGCAAATTCT
gi|59636 : ACAAACAAGTT-GTTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-ACCATTTCGCAAATT
gi|59638 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59641 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59642 : ACAGACAAGTT-GTTGTC-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTTGTAAATTCT
gi|59647 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59651 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59652 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59655 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59657 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59658 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59659 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59660 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59661 : ACAAACAAGTTTGATGCT-ACAGGAG-TTTGAAC-AGTCACGTTTAAAGTC-AGCATTCCGCAAATTCT
gi|59662 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59663 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59664 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACATTTAAAGGC-AGCATTTCGCAAATTCT
gi|59665 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59667 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59669 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59670 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59671 : ACAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59674 : ACAAACAAGTT-GTTATT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGTATTTCGCAAATTCT
gi|59675 : ACAAACAAGTT-GATGTT-GAAAGGG-TTTCAAC-TGTCGCGTTTGAAGTC-TGCATTTCGCAAATTC
gi|59676 : ATAAATAAAAT-GATGTT-ACAGGGGGTTTCAAC-AGTCTCATTTAAAGTC-AGCATTTCGCAA
gi|59677 : ACAAGCAAGTT-GATGTT-G-AGGGG-TTTCAAC-AGCCACATTTAAAGTC-GGCATTTTGCAAATTCT
gi|59678 : ACAAACAAGTT-GAAATT-GCAAGGG-TTTCAAC-AGTCCTATTTAAAGGC-AGCGCTTTGCAAATTCT
gi|59679 : ACAAACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATT
gi|59681 : ACAAACAATTT-GTTGTT-GCATGGG-TTTCAAC-AGTCACGTTTAAAGTC-ATCATTTCGCAAATTCT
gi|59682 : ACAAACAAGTT-GTTGTT-GCCGGGG-TTTCAAC-AGCCGCATTTAAAGGC-AGCATTTCACAAATTCT
gi|59683 : ACAGACAAGTT-GTTGTTTGCAGGGG-TTTCAAC-AGTCACGTTTAAAGTC-AGCATTTCGTAAATTC
gi|59684 : ACAAACAAGTT-G-------CAGGGG-TTTCAAC-AGTCTCGTTTAAAGGC-AGCATTTCGCAAATTC
gi|59685 : ACAAACAAATT-GATGCT-ATAGGAG-TTTGAAC-ATTCTCGTTTAAAGTC-AGTATTTTGCAAATTTT
gi|59686 : ACCAATAAGCT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59884 : CAAACTAGTT-GATGTT-ATAGGGA-TTTCCGC-AGTCTCGCTTAAAGTC-AGCATTTCACAAATTCT
gi|59886 : CAAATAAGTT-GATGTT-ACAGGGG-TTTCAAC-AGTCACGATTTAAGCC-AGCATTTTGCAAATT
gi|59888 : CAAACAAATT-ATTGTT-GCAGGGA-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGCAAATTTT
gi|59889 : CAAATAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAAGC-AGCATTTCGCGAATTCT
gi|59890 : CAAATAGGTT-GATGTT-ACAGGGA-TTTCAAC-AATTTTGTCTCAATTC-AGCATTTTGCAATTTCT
gi|59892 : CAACCAAGTT-GTTGTT-GCAGGAA-TTTCAAC-GGTCACGTTTAAAGGC-AGCATTTTGCAAATTCT
gi|59893 : CAAAAAAGTT-GATGTT-GCA-GGG-TTACAACGAATCTCGTTTAAAGTC-ACCATTTTGCAAATTCT
gi|59895 : CAGACAAGTT-GTTGTT-GCAGGGG-TTTCAAC-AGTCACGTTTAAAGGC-AGCATTTCGTAAATTCT
gi|59933 : AAATAAGTT-GATGTT-ACAGGGA-TTTTAAC-AGCCTCGTTTGAAGTC-AGCATTTCGCAAATTTT
gi|59937 : -GTTGTT-ACAGGGA-TTTCAAT-AGTCTCGTTTGAAGTC-AGCATTTCGCAAACTCT
gi|59938 : aaattaaAAATAAGTT-GTTGTT-GCAAGGG-TTTCAAC-AGTCAAATTTATAGTC-GGCATTTTGCAAATTCT
gi|59939 : AAACAAATT-AAAGTT-ACAAGGG-TCTCAAA-AGTCTCGTTTAAAATC-AGCATTTTGCAAATT
gi|59940 : AAATAAGGT-GGTGTT-GCAGGGG-TTTCAAC-AGTCTCGTTTATAGTC-AGCATGTTGCAAGTTTT
gi|59941 : AAATAATTT-GATGTT-ACGGAGA-TTTCAAC-AGTCTCATTTAAAAGTAAACATTTCGCAAATTCT
gi|59963 : ACAAATC-GATGTC-AAAGGGG-TTTCAAC-AGTCTCGTTTAAAGTC-AGCATTTCACAAATTCT
gi|59970 : AAGTT-GATTTT-ACAGGA--TTTCAAC-AGTCTTGTTTAAATTC-AGCATTTTACAAATT