lowQualScore                  :                      1    1   44             1          
lowQualScore                  :                      .    .   ..             .          
lowQualScore                  :                      7    7   11             8          
consensus                     : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
Reference ( gi|22501 )        : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22502                      : GATCACGTCAAGTTGACAGGC-GTGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22505                      : GATCACGTCGAGTTGACAGGC-GTGG-ATT--ATTAGATCACACA-AGACACGAAG
gi|22504                      : GATCACGTCGAGTTGACTGGC-GCGG-ATC--ATCAGATCATATG-AGACGC
gi|22506                      : GATCA-GTCGAGTTGACAGGC-GCGG-ATC--ATCAGAT-ACACGAAGACGCGAAG
gi|22507                      : GATCAGGTCGAGTTGACAGGC-ATGG-ATC--ATCAGATCACACG-AGACTCGA
gi|22503                      : GATCACGTGGAATAGACTGGC-GCGG-ATC--ATCAAATCACACG-AGACGCGAAG
gi|22509                      : GATCGCGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACATG-TGA
gi|22510                      : GATCACGTCAAGTTGACAGGC-GCAG-ATC--ATCAGATCACACA-CGAAGCG
gi|22511                      : GATCATGTCGAGTTGATAGGT-GCGG-ATC--ATCAGATCTTACA-AGATGCGAAG
gi|22513                      : GATTACGTCGTGTTGACAGGC-GCTG-ATC--ATCAGAACATACG-AGATGCGAAG
gi|22514                      : GATAACGTCGAGTTGACAATC-ATGG-ATC--ATCAGATCACATG-AGATGCGAAG
gi|22515                      : GATCATGTCGAGTTGACAGGC-GTGG-ATC--ATCAGATCAC-CG-AG
gi|22508                      : GATAACATCAAGTTGACAGGT-GCGA-ATC--ATCAATTCACACG-AGACGCGAA
gi|22516                      : GATCACGTCTCGTTGACAGGC-GCGG-ATC--ATCAGTTCACAAT-AGACACGAAG
gi|22518                      : GATCATGTCGCGTTGAGAGGC-GTGG-ATC--GTCAGATAACGCG-AGACGCAAA
gi|22517                      : GATCACGTCTCGTTAACAGGC-GCGG-ATC--ATCAGATCATACT-CGACGC
gi|22519                      : GACCACACCGAGTTGACGGGT-GTGG-ATC--ATCAGATCAAACA-AGATGCAAAG
gi|22520                      : GATCACATCAAGTTGATAGGC-GTGG-ATATAATCAGATCACACA-AGATCTGAAG
gi|22512                      : GATCACGTTGAGTCGACAGGC-ACGG-ATC--ATCA
gi|22521                      :  ATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AAACGCGTAG
gi|22522                      :   TCATGTCGAGTTGACAGGCTTCGG-ATC--ATCAGAT-ACATA-AGACAC
gi|22523                      :    CACGT-GAGTTG-CAGGC-GCGGCATCC-ATCGATTCACACG-AGACGCGAAG
gi|22524                      :      CATTGAGTTGACAATC-ATGG-ATC--ATCAGATCACATG-AGACGCAAAG





Alignments
lowQualScore                  :                      1    1   44             1          
lowQualScore                  :                      .    .   ..             .          
lowQualScore                  :                      7    7   00             7          
consensus                     : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
Reference ( family-732 )      : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22501                      : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22502                      : GATCACGTCAAGTTGACAGGC-GTGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22503                      : GATCACGTGGAATAGACTGGC-GCGG-ATC--ATCAAATCACACG-AGACGCGAAG
gi|22504                      : GATCACGTCGAGTTGACTGGC-GCGG-ATC--ATCAGATCATATG-AGACGC
gi|22505                      : GATCACGTCGAGTTGACAGGC-GTGG-ATT--ATTAGATCACACA-AGACACGAAG
gi|22506                      : GATCA-GTCGAGTTGACAGGC-GCGG-ATC--ATCAGAT-ACACGAAGACGCGAAG
gi|22507                      : GATCAGGTCGAGTTGACAGGC-ATGG-ATC--ATCAGATCACACG-AGACTCGA
gi|22508                      : GATAACATCAAGTTGACAGGT-GCGA-ATC--ATCAATTCACACG-AGACGCGAA
gi|22509                      : GATCGCGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACATG-TGA
gi|22510                      : GATCACGTCAAGTTGACAGGC-GCAG-ATC--ATCAGATCACACA-CGAAGCG
gi|22511                      : GATCATGTCGAGTTGATAGGT-GCGG-ATC--ATCAGATCTTACA-AGATGCGAAG
gi|22512                      : GATCACGTTGAGTCGACAGGC-ACGG-ATC--ATCA
gi|22513                      : GATTACGTCGTGTTGACAGGC-GCTG-ATC--ATCAGAACATACG-AGATGCGAAG
gi|22514                      : GATAACGTCGAGTTGACAATC-ATGG-ATC--ATCAGATCACATG-AGATGCGAAG
gi|22515                      : GATCATGTCGAGTTGACAGGC-GTGG-ATC--ATCAGATCAC-CG-AG
gi|22516                      : GATCACGTCTCGTTGACAGGC-GCGG-ATC--ATCAGTTCACAAT-AGACACGAAG
gi|22517                      : GATCACGTCTCGTTAACAGGC-GCGG-ATC--ATCAGATCATACT-CGACGC
gi|22518                      : GATCATGTCGCGTTGAGAGGC-GTGG-ATC--GTCAGATAACGCG-AGACGCAAA
gi|22519                      : GACCACACCGAGTTGACGGGT-GTGG-ATC--ATCAGATCAAACA-AGATGCAAAG
gi|22520                      : GATCACATCAAGTTGATAGGC-GTGG-ATATAATCAGATCACACA-AGATCTGAAG
gi|22521                      :  ATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AAACGCGTAG
gi|22522                      :   TCATGTCGAGTTGACAGGCTTCGG-ATC--ATCAGAT-ACATA-AGACAC
gi|22523                      :    CACGT-GAGTTG-CAGGC-GCGGCATCC-ATCGATTCACACG-AGACGCGAAG
gi|22524                      :      CATTGAGTTGACAATC-ATGG-ATC--ATCAGATCACATG-AGACGCAAAG





Alignments
lowQualScore                  :                      1    1   44             1          
lowQualScore                  :                      .    .   ..             .          
lowQualScore                  :                      7    7   00             7          
consensus                     : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
Reference ( family-732 )      : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22501                      : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22502                      : GATCACGTCAAGTTGACAGGC-GTGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22503                      : GATCACGTGGAATAGACTGGC-GCGG-ATC--ATCAAATCACACG-AGACGCGAAG
gi|22504                      : GATCACGTCGAGTTGACTGGC-GCGG-ATC--ATCAGATCATATG-AGACGC
gi|22505                      : GATCACGTCGAGTTGACAGGC-GTGG-ATT--ATTAGATCACACA-AGACACGAAG
gi|22506                      : GATCA-GTCGAGTTGACAGGC-GCGG-ATC--ATCAGAT-ACACGAAGACGCGAAG
gi|22507                      : GATCAGGTCGAGTTGACAGGC-ATGG-ATC--ATCAGATCACACG-AGACTCGA
gi|22508                      : GATAACATCAAGTTGACAGGT-GCGA-ATC--ATCAATTCACACG-AGACGCGAA
gi|22509                      : GATCGCGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACATG-TGA
gi|22510                      : GATCACGTCAAGTTGACAGGC-GCAG-ATC--ATCAGATCACACA-CGAAGCG
gi|22511                      : GATCATGTCGAGTTGATAGGT-GCGG-ATC--ATCAGATCTTACA-AGATGCGAAG
gi|22512                      : GATCACGTTGAGTCGACAGGC-ACGG-ATC--ATCA
gi|22513                      : GATTACGTCGTGTTGACAGGC-GCTG-ATC--ATCAGAACATACG-AGATGCGAAG
gi|22514                      : GATAACGTCGAGTTGACAATC-ATGG-ATC--ATCAGATCACATG-AGATGCGAAG
gi|22515                      : GATCATGTCGAGTTGACAGGC-GTGG-ATC--ATCAGATCAC-CG-AG
gi|22516                      : GATCACGTCTCGTTGACAGGC-GCGG-ATC--ATCAGTTCACAAT-AGACACGAAG
gi|22517                      : GATCACGTCTCGTTAACAGGC-GCGG-ATC--ATCAGATCATACT-CGACGC
gi|22518                      : GATCATGTCGCGTTGAGAGGC-GTGG-ATC--GTCAGATAACGCG-AGACGCAAA
gi|22519                      : GACCACACCGAGTTGACGGGT-GTGG-ATC--ATCAGATCAAACA-AGATGCAAAG
gi|22520                      : GATCACATCAAGTTGATAGGC-GTGG-ATATAATCAGATCACACA-AGATCTGAAG
gi|22521                      :  ATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AAACGCGTAG
gi|22522                      :   TCATGTCGAGTTGACAGGCTTCGG-ATC--ATCAGAT-ACATA-AGACAC
gi|22523                      :    CACGT-GAGTTG-CAGGC-GCGGCATCC-ATCGATTCACACG-AGACGCGAAG
gi|22524                      :      CATTGAGTTGACAATC-ATGG-ATC--ATCAGATCACATG-AGACGCAAAG


blockSeqs                     :                      T    C   TA             A
blockSeqs                     :                      .    .   C              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .              .
blockSeqs                     :                      .    .   .               


blockSeqCons                  : 
originalCons                  : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
finalCons                     : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG





Alignments
lowQualScore                  :                      1    1   44             1          
lowQualScore                  :                      .    .   ..             .          
lowQualScore                  :                      7    7   00             7          
consensus                     : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
Reference ( family-732 )      : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22501                      : GATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22502                      : GATCACGTCAAGTTGACAGGC-GTGG-ATC--ATCAGATCACACG-AGACGCGAAG
gi|22503                      : GATCACGTGGAATAGACTGGC-GCGG-ATC--ATCAAATCACACG-AGACGCGAAG
gi|22504                      : GATCACGTCGAGTTGACTGGC-GCGG-ATC--ATCAGATCATATG-AGACGC
gi|22505                      : GATCACGTCGAGTTGACAGGC-GTGG-ATT--ATTAGATCACACA-AGACACGAAG
gi|22506                      : GATCA-GTCGAGTTGACAGGC-GCGG-ATC--ATCAGAT-ACACGAAGACGCGAAG
gi|22507                      : GATCAGGTCGAGTTGACAGGC-ATGG-ATC--ATCAGATCACACG-AGACTCGA
gi|22508                      : GATAACATCAAGTTGACAGGT-GCGA-ATC--ATCAATTCACACG-AGACGCGAA
gi|22509                      : GATCGCGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACATG-TGA
gi|22510                      : GATCACGTCAAGTTGACAGGC-GCAG-ATC--ATCAGATCACACA-CGAAGCG
gi|22511                      : GATCATGTCGAGTTGATAGGT-GCGG-ATC--ATCAGATCTTACA-AGATGCGAAG
gi|22512                      : GATCACGTTGAGTCGACAGGC-ACGG-ATC--ATCA
gi|22513                      : GATTACGTCGTGTTGACAGGC-GCTG-ATC--ATCAGAACATACG-AGATGCGAAG
gi|22514                      : GATAACGTCGAGTTGACAATC-ATGG-ATC--ATCAGATCACATG-AGATGCGAAG
gi|22515                      : GATCATGTCGAGTTGACAGGC-GTGG-ATC--ATCAGATCAC-CG-AG
gi|22516                      : GATCACGTCTCGTTGACAGGC-GCGG-ATC--ATCAGTTCACAAT-AGACACGAAG
gi|22517                      : GATCACGTCTCGTTAACAGGC-GCGG-ATC--ATCAGATCATACT-CGACGC
gi|22518                      : GATCATGTCGCGTTGAGAGGC-GTGG-ATC--GTCAGATAACGCG-AGACGCAAA
gi|22519                      : GACCACACCGAGTTGACGGGT-GTGG-ATC--ATCAGATCAAACA-AGATGCAAAG
gi|22520                      : GATCACATCAAGTTGATAGGC-GTGG-ATATAATCAGATCACACA-AGATCTGAAG
gi|22521                      :  ATCACGTCGAGTTGACAGGC-GCGG-ATC--ATCAGATCACACG-AAACGCGTAG
gi|22522                      :   TCATGTCGAGTTGACAGGCTTCGG-ATC--ATCAGAT-ACATA-AGACAC
gi|22523                      :    CACGT-GAGTTG-CAGGC-GCGGCATCC-ATCGATTCACACG-AGACGCGAAG
gi|22524                      :      CATTGAGTTGACAATC-ATGG-ATC--ATCAGATCACATG-AGACGCAAAG