lowQualScore : 66 0 5 0 11 00 0 0 0000 111111 0 6
lowQualScore : .. . . . .. .. . . .... ...... . .
lowQualScore : 11 4 8 8 00 66 4 4 9999 222222 4 3
consensus : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-GAA--GA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGCAT
Reference ( gi|27934 ) : AGTAATCCGTAGTCAAAA-TCA-GTATAT-AAA--GA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACGCCAGACAGCAT
gi|27936 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-AAA--GA--ACGGCCCAACAA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|27938 : AGTAATATGTAGTCAAAA-TCA-GTGTAT-AAA--GA--ACGGCTTAACAA-TT-G----CT------ACG-AAACACGTCAGACAGCAT
gi|27954 : AGTAATCCGTAGTCAAAA-TCA-GTGTAC-AGA--AA--ACGGCTTAATAA-TT-G----AT------ATG-AAACACGCCAGACAGCAT
gi|27951 : AGTAATCCGTAGTCAAAA-TCG-GTGTAT-AAT--GA--ATGGCTTAACAA-TT-G----CT------ATG-AAACATGTCAGACAGCAT
gi|27980 : AGCAATCTGTAGTCAAAA-TCA-GTATAT-AAA--GA--ACAACTTAACAA-TT-G----CT------TTG-AAACACGTCAGACAGCAT
gi|27987 : AGTAATTCGTAGTCAAA--TCA-GTATAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27955 : AGTAATCCGTAATCAAAA-CCG-ATGTAT-AAA--GA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGC
gi|27988 : AGCAATTCGTAGTCAAAA-TCA-GTATAT-GAA--GA--ACGGTTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGTAT
gi|27958 : AGCAATCTGTAGTCAAAA-TCA-GAGTAT-AAA--GA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACATCAT
gi|27943 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-AAA--GA--ACAGCTAAACAA-TT-G----AT------ATG-AAACACATCAGACAGCAT
gi|27942 : AGTAATCCGTAGTCAAAA-TCA-GTGCGT-AAA--GA--ACGGCCTAACAA-TT-G----GT------ATG-AAGCACGTCAGACAGCAT
gi|28013 : AGTAATCCGTAGTAAAAA-CCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAATACACCAGACAGCAT
gi|27953 : AGTAATCCGTAGTCGAAA-TCT-GTGTAT-AAA--GA--ACGGTTTAATAA-TT-G----CT------ACG-AAACACGTCAGACAGCAT
gi|27963 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATA-AAACACATCAGACAGCAT
gi|27939 : AGTAGTCCGTAGTCAAAA-TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-A----TT------ATG-AAACACATCAGACAGCAT
gi|27941 : AGTAACCCGTTGTCAAAA-TCA-GTGTAT-AAA--GA--ACGGCTTAGCAA-TT-G----TT------ATG-AAACACGTCATACAGCAT
gi|27966 : AGTAATCCGTAGTCAAAA-TCA-ATGTAT-TAA--GA--ACGGCTT-ACAA-TT-G----CT------ATG-ATACACGTCAGACAGCAT
gi|27967 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACA
gi|27962 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-AAG--GA--ACGGCTTAAC----T-G----CT------ATA-AAACACATCAGACAGCAT
gi|27937 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-AAA--GA--ACGGCTTAAAAA-TT-G----GT------ATG-AAACATGTCAGACA
gi|27986 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAGCACATCAGACAGCAT
gi|27983 : AGTAATCCGTAGTCAAAA-TCA-CTGTAT-GGA--AA--ACGGCTTAACAA-TT-G----CT------AAG-AAACACGTCAGACAGCA
gi|27993 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-AAG--GA--ACGGCTGAACAA-TT-G----CC------AAG-AAACACGTTAGACAGTAT
gi|27964 : AGTAATCCGTAGTCAAAA-CCA-GTGTAT-ATA--GA--ACGGCTTAACGA-TT-G----TC------ATG-AAACATGACAGACAGCAT
gi|27999 : AGTAATCCGTAGT-GAAA-TCA-GTGTGT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27998 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-AAA---A--ATGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27973 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAATAA-TT-G----CT------ATG-CAACACATCAGACAGCAT
gi|28010 : AGTAATCCGTAGTCAAAA-TAT-GTGTAT-AAA--GA--ACGGCTTAACAT-TT-G----CT------ATA-AAACAAGTCAGACAGCAT
gi|27950 : AGTAAACCGTAGTCAAAA-TCA-GTGTAT-AAA--GA--ACGGTCTAA-AA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|28015 : AGAAATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACATCAAACAGCAT
gi|27976 : AGTAATCTATAGTCAAAA-TCA-GTGCAC-AAA--GA--ACAGCTTAACAA-TT-G----GT------ATA-AAACACGTCAGACAGCAT
gi|27968 : AGTAATCCGTAGTCAAAA-TCA-GTGTTT-AAA--GA--ACGACCTAACAA-TT-G----GT------ATG-TAACACGTCAGACAGCA
gi|28018 : AGTAATGCGTAGTCAAAAATCG-GTGTAT-AAA--GA--ACAGCTTAACAA-TG-G----CT------ATG-AAACACGTCAGGCAGCAT
gi|28017 : AGTAATCAGTAGTCAAAA-GCA-GTGTAT-AAA--GA--ACGGCTTAACAA-TT-G----CT------ATG-GAACACGTCAAACA
gi|28016 : AGTAATCCATAGTCAAAA-TCT-GTGTAT-AAA--GA--ACGGCTAATCAA-TT-G----CT------ATG-AAACTCGTCAGACAGCAT
gi|28024 : AGTAATCCGTAGTCAAAA-TCA-GTCTAT-AAG--GA--ACGGTCTAACAA-TT-G----GT------ATG-AAACACTTCAGACAGTAT
gi|28022 : AGTAATACGTAGTCAACA-TCA-TTGTAT-AAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAACGCATCAGACAGCAT
gi|27944 : AGTAGTCCTTAGTCAAAA-TCA-GTGTAT-AAA--GA--ACGGCCTAAGAA-TT-G----GT------ATG-AAACATGTCAGACAGCAT
gi|28032 : AGTAATCCGTAGTCAAAA-TCG-GTGTATTCAA--GA--ATGGCTAAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28039 : AGTAATCCGTAGT-AAAA-TCA-GTGTAT-GAA--AA--CCGGTTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27984 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-AAG--GA--GCAGCTTAACTA-TT-G----CA------ATG-AAACACTTCAGACAGCAT
gi|28037 : AGTAATCTATAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTCAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28036 : AGCAATCCATAGTCAAA--TCA-GTGTAT-GAA--AA--ACGACTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28034 : AATAATCCGAAGTCAAAA-TCA-GTTTAT-AGA--GA--ATGGCTTAACAG-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|28040 : AGCAATCCGCAGTCAAAA-TAA-GTGTGT-AAA--GA--ACGGCTTAACAA-TT-G----CC------AAG-AAACACATCAGACAGCAT
gi|27992 : AGTAATCTGTAGTCAAAA-TCA-GTGTAT-GAA--GA--ACGGCCTAACAA-TT-G----GT------ATG-ACACATGTCAGACAACAT
gi|28043 : AGTAATCCGTAGTAAAAA-TCA-ATGTAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACATCGTACAGCAT
gi|28009 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------TTG-AAACACATCTGACAGCAT
gi|28052 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGTTTAACAA-TT-G----CT------ATG-AAACACA-TAGACAGCAT
gi|28048 : AGTAATCCGCAGTCAAAA-TCA-ATGTAT-GAA--AA--ACTGCTTAACAA-TT-G----CT------ATG-AAACATGTTAGACAGCA
gi|28055 : AATAATCCGTAGTCAAA--TCA-GTGTGT-GAA--AA--ACGGCTTAACAA-TG-G----CT------ATG-AAACACATCAGACAGCAT
gi|28054 : AGTAATCCGTAGTTAAAA-CCA-GTGTAT-AGA--GAGAACGGCTTAACAA-TT-G----CT------ATG-AAGCACTTCAGACAACAT
gi|28007 : AGTAATCCGTAGTTAAAA-TCA-GTGTAT-AAA--GA--ACGCCTTAACAA-TT-G----GT------ATGAAAAAATGTCAGACAGCAT
gi|28059 : AGTAATCCGTAGTCAAA--TCA-GGGTAT-GAA--AA--ACAGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28058 : AGTAATCCATAGTCCAAA-TCA-GTGTAT-GAA--AA--ACGGCTTAACAG-TT-G----CT------ATG-AAACGTATCAGACAGCAT
gi|28019 : AATAATCCGTAGTCAAAA-TCT-GTCTAT-AAAA-GA--ACGACTTAATAA-TT-G----AT------ATG-AAACACGTCAGACAGCAT
gi|28061 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAACTA-TT-G----CT------ATG-AAATACATCAGACAGCAT
gi|28065 : AGTAATCCATAGTCAAAA-TCA-GTGTAT-GAA--AA--ATGGCTTAACAA-TT-G----CT------AGA-AAACACATCAGACAGC
gi|28069 : AATAATCCGTAGTAACAA-TCA-GTGTAT-GAA--CA--ACAGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28068 : AGTAATCCGTTGTCAAAA-TCA-GTGTAT-AAA--GA--ACGCTTTAACAATTT-G----CC------ATG-AAACGCGTCAGACAGCGT
gi|28029 : AGTAATCCGTAGTCCAAA-TCA-GTGCAC-AAA--GA--ACGGCATAACAA-TT-G----GT------ATG-AAACACATCAGACAACAT
gi|28070 : AGTAATCCGTAGTCAAAA-TCA-GAGTAT-AAAACAA--ACGGCTTAACAA-TT-G----CTACATGCATG-AAATACGTCAGACAGCAT
gi|28020 : AATAATCCGTAGTCAAAA-TCT-GTCTAT-AA---GA--ACGACTTAATAA-TT-G----AT------ATG-AAACACGTCAGACAGCAT
gi|27989 : AGCAATCCGTAGTCAAAA-TCA-GTGTGTGAAA--AA--ACGGCTTAACAA-TG-G----TT------ATG-GAACACATCAGACAGCAT
gi|28051 : AATAATCCGTAGTCAAA--TCA-GTGTAT-GAA--GA--ACGGCCAAACAA-TT-G----AT------ATG-AAACATGTCAGACAGCAT
gi|27997 : AGTAATCCGTAGTAAAAA-TTG-GTGTAT-AAA--GA--ACGGCTTAACAA-TT-G----TT------ATG-AGATACGTCAAACATCAT
gi|28062 : AGTAATCGGTAGTCAAAA-TCA-GTGTAA-AAA--GA--ACGGTCTAACAA-TT-G----AT------ATA-AAACACGTCAGACAGAAT
gi|28008 : AGCAATCCGTAGTCAAA--TCA-GTGTAC-GAA--AA--TCGGCTTAACAA-TT-G----TT------ATG-AAACACATCAGACAGCAT
gi|27945 : AGTAATCTGTATTCAAA--TCA-GTGTAT-GAA--AA--ACGACTTAATAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28033 : AGTAATCCACAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-G----TT------ATG-AAACACGTCAGATAG
gi|28023 : AGCAATCCCTAGTCAAAA-TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-CT-G----TT------ATG-AAAAACGTCAGACATCAT
gi|27961 : AGTAATCCGTAGTCAAAA-TCAAGTGTAT-AAA--GA--ATTGTTTAAGAA-TT-G----TT------GTG-AAACACATCAGACAGCAT
gi|28042 : AGTAATCCGTTTTCAAAG-TCA-GTGCGT-AAA--GA--ACTGCTTAAGAA-TT-G----CT------ATG-AAACGCGTCAGACAGCAT
gi|28064 : AGTAATCAGCAGTCAAAA-TCA-GTGTAT-GAA--AA--ATGACTTAACGA-TT-G----TT------ATG-AAACATGTCAGGCAGCAT
gi|28066 : AGTAATTCGTAGTCAAA--TCA-GTGTGT-GAA--AA--ACGGCTTAA----TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28050 : AGTAATCCGCAGTCAAAA-TCA-GTGAAT-GAA--AA--ACGGCTTAA-AA-TTCG----CT------ATT-GAACACGTCAGACAGCAT
gi|27975 : AGTAATCCTTAGTCAAAA-CCA-ATGTAT-AAA--GG--ACAGCTTCAAAA-TT-G----TC------ATG-AAACACATCAGACAGCAT
gi|27969 : AGTAACCCGTAGTCAAAG-TCG-GTGTGT-AAA--GA--ACAGCCTAAATA-TT-G----TT------ATG-AAACACGTCAGACAGGAT
gi|27978 : AGTAATCCGTAGTCAAA--TCA-GTGTAG-GAA--AA--ACGGCTTTAAAA-TT-G----TT------ATG-AAACACATCAGACAACAT
gi|28187 : GTAATCTGTAGTCAAAA-TCT-GTGTAT-AAA--GA--ACGGCTTAACAA-TC-G----CT------ATG-AAACACATCAGACAGCAT
gi|28195 : GTAATCCGTAGTCAAAA-TCA-GTGTAT-AAA--AA--ACGGCTTAGCAA-AT-G----CC------ATG-AAACACACCAGGCAGCAT
gi|28189 : GTAATCCGTGGTCAAAA-TCA-GTGTAT-AAA--GA--ACGGTTTAACAA-AT-G----CT------ATG-AAACGCGTCACACAGCAT
gi|28192 : GCAATCCGCAGTCAAAA-TCA-GTGCAT-GAA--AA--ACAGCTTAACAA-TT-G----CT------ATG-AAACATGTCAGACAGCAT
gi|28193 : GTAATTCGTAGTCAATA-TCA-GTGCAT-AAA--GA--ACGGCTTAACAA-GT-G----CT------ATG-AAACACGTCAAACAG
gi|28198 : GTAAACTGTAGTCAAAA-TCA-GTGTAT-AAA--GA--ACGGCTTAACAA-TT-GAGCACT------ATT-AAACACTTCAGACAGCAT
gi|28197 : GTAATCTGTACTCAAAA-TCA-GCGTAT-AAA--GA--ACACCGTAACAA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|28188 : GCAATCCGTAGTCAAA--CCA-GTGTAT-AAA---A--ACGGCTTAAGAA-TT-G----CT------ATG-AAACACATCAGACATCAT
gi|28223 : TAATCCGTAGTCGAAA-TCA-GTATAT-AAA--GA--ACGGCTTTACAA-TT-G----CT------ATG-AAACACCTCAGAAAGCAT
gi|28221 : TAATCCGTAGTCAACA-TCA-GTGTAT-AAA--GA--ACGGCCTAACAA-CC-G----TT------ATG-AAACACGTTAGACAGCAT
gi|28253 : AATCCGTAGTCAAA--TCA-GTGTGT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28255 : AATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28244 : AATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACGGCTTAACAA-TT-G----CT------ATA-AAACACATCAGACAGCAT
gi|28260 : AATCCGTAATCAAAA-TCA-GTGTAT-AAA--GA--ACGGCTT-ACAA-TT-G----CT------ATG-AAACACG-TAGACAACAT
gi|28261 : AATCCGTAGTCAAA--TCA-GTGTGT-AAA--AA--ACGGCTTAACAA-TG-G----CT------ATG-AAACACATCAGACAGCAT
gi|28267 : AATCCGTAGTCAAAA-TCA-GTGTAT-AAA--GA--ACAGCTTAACAA-TT-C----CT------ATG-AAGCACGTCATACAGAAT
gi|28264 : AATCCGTAGTCAAA--TCA-GTGTGT-GAA--AA--ACGGCTTAACAA-TG-G----TT------ATG-AAACACATCAGACAGCAT
gi|28262 : AATCCGTAGTCAAA--TCA-GTGTGT-GAA--AA--ACGGCTTAACAA-TG-G----TT------ATG-AAACACATCAGACAGCAT
gi|28272 : AATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ACTGTTTAAAAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28379 : ATCCGTAGTCAAA--TCA-GTGTAT-GAA--AA--ATGGCTTAATAA-TT-A----CT------ATG-AAACACGTCAGACAGCAT
Alignments
lowQualScore : 55 0 0 0 0 11 0 0 0 0000 111111 0
lowQualScore : .. . . . . .. . . . .... ...... .
lowQualScore : 99 4 4 4 4 00 4 4 4 8888 111111 4
consensus : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGCAT
Reference ( family-72 ) : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGCAT
gi|27934 : AGTAATCCGTAGTCAAAA-TCA-GTATAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGCCAGACAGCAT
gi|27936 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCCCAACAA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|27937 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAAAAA-TT-G----GT------ATG-AAACATGTCAGACA
gi|27938 : AGTAATATGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ACG-AAACACGTCAGACAGCAT
gi|27939 : AGTAGTCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-A----TT------ATG-AAACACATCAGACAGCAT
gi|27941 : AGTAACCCGTTGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAGCAA-TT-G----TT------ATG-AAACACGTCATACAGCAT
gi|27942 : AGTAATCCGTAGTCAAAA-TCA-GTGCGT-A-A-A--GAA-CGGCCTAACAA-TT-G----GT------ATG-AAGCACGTCAGACAGCAT
gi|27943 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CAGCTAAACAA-TT-G----AT------ATG-AAACACATCAGACAGCAT
gi|27944 : AGTAGTCCTTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCCTAAGAA-TT-G----GT------ATG-AAACATGTCAGACAGCAT
gi|27945 : AGTAATCTGTATTCAAA--TCA-GTGTAT-G-A-A--AAA-CGACTTAATAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27950 : AGTAAACCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGTCTAA-AA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|27951 : AGTAATCCGTAGTCAAAA-TCG-GTGTAT-A-A-T--GAA-TGGCTTAACAA-TT-G----CT------ATG-AAACATGTCAGACAGCAT
gi|27953 : AGTAATCCGTAGTCGAAA-TCT-GTGTAT-A-A-A--GAA-CGGTTTAATAA-TT-G----CT------ACG-AAACACGTCAGACAGCAT
gi|27954 : AGTAATCCGTAGTCAAAA-TCA-GTGTAC-A-G-A--AAA-CGGCTTAATAA-TT-G----AT------ATG-AAACACGCCAGACAGCAT
gi|27955 : AGTAATCCGTAATCAAAA-CCG-ATGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGC
gi|27958 : AGCAATCTGTAGTCAAAA-TCA-GAGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACATCAT
gi|27961 : AGTAATCCGTAGTCAAAA-TCAAGTGTAT-A-A-A--GAA-TTGTTTAAGAA-TT-G----TT------GTG-AAACACATCAGACAGCAT
gi|27962 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-G--GAA-CGGCTTAAC----T-G----CT------ATA-AAACACATCAGACAGCAT
gi|27963 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATA-AAACACATCAGACAGCAT
gi|27964 : AGTAATCCGTAGTCAAAA-CCA-GTGTAT-A-T-A--GAA-CGGCTTAACGA-TT-G----TC------ATG-AAACATGACAGACAGCAT
gi|27966 : AGTAATCCGTAGTCAAAA-TCA-ATGTAT-T-A-A--GAA-CGGCTT-ACAA-TT-G----CT------ATG-ATACACGTCAGACAGCAT
gi|27967 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACA
gi|27968 : AGTAATCCGTAGTCAAAA-TCA-GTGTTT-A-A-A--GAA-CGACCTAACAA-TT-G----GT------ATG-TAACACGTCAGACAGCA
gi|27969 : AGTAACCCGTAGTCAAAG-TCG-GTGTGT-A-A-A--GAA-CAGCCTAAATA-TT-G----TT------ATG-AAACACGTCAGACAGGAT
gi|27973 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAATAA-TT-G----CT------ATG-CAACACATCAGACAGCAT
gi|27975 : AGTAATCCTTAGTCAAAA-CCA-ATGTAT-A-A-A--GGA-CAGCTTCAAAA-TT-G----TC------ATG-AAACACATCAGACAGCAT
gi|27976 : AGTAATCTATAGTCAAAA-TCA-GTGCAC-A-A-A--GAA-CAGCTTAACAA-TT-G----GT------ATA-AAACACGTCAGACAGCAT
gi|27978 : AGTAATCCGTAGTCAAA--TCA-GTGTAG-G-A-A--AAA-CGGCTTTAAAA-TT-G----TT------ATG-AAACACATCAGACAACAT
gi|27980 : AGCAATCTGTAGTCAAAA-TCA-GTATAT-A-A-A--GAA-CAACTTAACAA-TT-G----CT------TTG-AAACACGTCAGACAGCAT
gi|27983 : AGTAATCCGTAGTCAAAA-TCA-CTGTAT-G-G-A--AAA-CGGCTTAACAA-TT-G----CT------AAG-AAACACGTCAGACAGCA
gi|27984 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-G--GAG-CAGCTTAACTA-TT-G----CA------ATG-AAACACTTCAGACAGCAT
gi|27986 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAGCACATCAGACAGCAT
gi|27987 : AGTAATTCGTAGTCAAA--TCA-GTATAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27988 : AGCAATTCGTAGTCAAAA-TCA-GTATAT-G-A-A--GAA-CGGTTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGTAT
gi|27989 : AGCAATCCGTAGTCAAAA-TCA-GTGTGT-G-A-A--AAAACGGCTTAACAA-TG-G----TT------ATG-GAACACATCAGACAGCAT
gi|27992 : AGTAATCTGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCCTAACAA-TT-G----GT------ATG-ACACATGTCAGACAACAT
gi|27993 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-G--GAA-CGGCTGAACAA-TT-G----CC------AAG-AAACACGTTAGACAGTAT
gi|27997 : AGTAATCCGTAGTAAAAA-TTG-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----TT------ATG-AGATACGTCAAACATCAT
gi|27998 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-A-A-A---AA-TGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27999 : AGTAATCCGTAGT-GAAA-TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28007 : AGTAATCCGTAGTTAAAA-TCA-GTGTAT-A-A-A--GAA-CGCCTTAACAA-TT-G----GT------ATGAAAAAATGTCAGACAGCAT
gi|28008 : AGCAATCCGTAGTCAAA--TCA-GTGTAC-G-A-A--AAT-CGGCTTAACAA-TT-G----TT------ATG-AAACACATCAGACAGCAT
gi|28009 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------TTG-AAACACATCTGACAGCAT
gi|28010 : AGTAATCCGTAGTCAAAA-TAT-GTGTAT-A-A-A--GAA-CGGCTTAACAT-TT-G----CT------ATA-AAACAAGTCAGACAGCAT
gi|28013 : AGTAATCCGTAGTAAAAA-CCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAATACACCAGACAGCAT
gi|28015 : AGAAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAAACAGCAT
gi|28016 : AGTAATCCATAGTCAAAA-TCT-GTGTAT-A-A-A--GAA-CGGCTAATCAA-TT-G----CT------ATG-AAACTCGTCAGACAGCAT
gi|28017 : AGTAATCAGTAGTCAAAA-GCA-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-GAACACGTCAAACA
gi|28018 : AGTAATGCGTAGTCAAAAATCG-GTGTAT-A-A-A--GAA-CAGCTTAACAA-TG-G----CT------ATG-AAACACGTCAGGCAGCAT
gi|28019 : AATAATCCGTAGTCAAAA-TCT-GTCTAT-A-A-AA-GAA-CGACTTAATAA-TT-G----AT------ATG-AAACACGTCAGACAGCAT
gi|28020 : AATAATCCGTAGTCAAAA-TCT-GTCTAT---A-A--GAA-CGACTTAATAA-TT-G----AT------ATG-AAACACGTCAGACAGCAT
gi|28022 : AGTAATACGTAGTCAACA-TCA-TTGTAT-A-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACGCATCAGACAGCAT
gi|28023 : AGCAATCCCTAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-CT-G----TT------ATG-AAAAACGTCAGACATCAT
gi|28024 : AGTAATCCGTAGTCAAAA-TCA-GTCTAT-A-A-G--GAA-CGGTCTAACAA-TT-G----GT------ATG-AAACACTTCAGACAGTAT
gi|28029 : AGTAATCCGTAGTCCAAA-TCA-GTGCAC-A-A-A--GAA-CGGCATAACAA-TT-G----GT------ATG-AAACACATCAGACAACAT
gi|28032 : AGTAATCCGTAGTCAAAA-TCG-GTGTAT-TCA-A--GAA-TGGCTAAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28033 : AGTAATCCACAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----TT------ATG-AAACACGTCAGATAG
gi|28034 : AATAATCCGAAGTCAAAA-TCA-GTTTAT-A-G-A--GAA-TGGCTTAACAG-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|28036 : AGCAATCCATAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGACTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28037 : AGTAATCTATAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTCAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28039 : AGTAATCCGTAGT-AAAA-TCA-GTGTAT-G-A-A--AAC-CGGTTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28040 : AGCAATCCGCAGTCAAAA-TAA-GTGTGT-A-A-A--GAA-CGGCTTAACAA-TT-G----CC------AAG-AAACACATCAGACAGCAT
gi|28042 : AGTAATCCGTTTTCAAAG-TCA-GTGCGT-A-A-A--GAA-CTGCTTAAGAA-TT-G----CT------ATG-AAACGCGTCAGACAGCAT
gi|28043 : AGTAATCCGTAGTAAAAA-TCA-ATGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCGTACAGCAT
gi|28048 : AGTAATCCGCAGTCAAAA-TCA-ATGTAT-G-A-A--AAA-CTGCTTAACAA-TT-G----CT------ATG-AAACATGTTAGACAGCA
gi|28050 : AGTAATCCGCAGTCAAAA-TCA-GTGAAT-G-A-A--AAA-CGGCTTAA-AA-TTCG----CT------ATT-GAACACGTCAGACAGCAT
gi|28051 : AATAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--GAA-CGGCCAAACAA-TT-G----AT------ATG-AAACATGTCAGACAGCAT
gi|28052 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGTTTAACAA-TT-G----CT------ATG-AAACACAT-AGACAGCAT
gi|28054 : AGTAATCCGTAGTTAAAA-CCA-GTGTATAG-AGA--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAGCACTTCAGACAACAT
gi|28055 : AATAATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TG-G----CT------ATG-AAACACATCAGACAGCAT
gi|28058 : AGTAATCCATAGTCCAAA-TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAG-TT-G----CT------ATG-AAACGTATCAGACAGCAT
gi|28059 : AGTAATCCGTAGTCAAA--TCA-GGGTAT-G-A-A--AAA-CAGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28061 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACTA-TT-G----CT------ATG-AAATACATCAGACAGCAT
gi|28062 : AGTAATCGGTAGTCAAAA-TCA-GTGTAA-A-A-A--GAA-CGGTCTAACAA-TT-G----AT------ATA-AAACACGTCAGACAGAAT
gi|28064 : AGTAATCAGCAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-TGACTTAACGA-TT-G----TT------ATG-AAACATGTCAGGCAGCAT
gi|28065 : AGTAATCCATAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-TGGCTTAACAA-TT-G----CT------AGA-AAACACATCAGACAGC
gi|28066 : AGTAATTCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAA----TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28068 : AGTAATCCGTTGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGCTTTAACAATTT-G----CC------ATG-AAACGCGTCAGACAGCGT
gi|28069 : AATAATCCGTAGTAACAA-TCA-GTGTAT-G-A-A--CAA-CAGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28070 : AGTAATCCGTAGTCAAAA-TCA-GAGTAT-A-A-AACAAA-CGGCTTAACAA-TT-G----CTACATGCATG-AAATACGTCAGACAGCAT
gi|28187 : GTAATCTGTAGTCAAAA-TCT-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TC-G----CT------ATG-AAACACATCAGACAGCAT
gi|28188 : GCAATCCGTAGTCAAA--CCA-GTGTAT-A-A-A---AA-CGGCTTAAGAA-TT-G----CT------ATG-AAACACATCAGACATCAT
gi|28189 : GTAATCCGTGGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGTTTAACAA-AT-G----CT------ATG-AAACGCGTCACACAGCAT
gi|28192 : GCAATCCGCAGTCAAAA-TCA-GTGCAT-G-A-A--AAA-CAGCTTAACAA-TT-G----CT------ATG-AAACATGTCAGACAGCAT
gi|28193 : GTAATTCGTAGTCAATA-TCA-GTGCAT-A-A-A--GAA-CGGCTTAACAA-GT-G----CT------ATG-AAACACGTCAAACAG
gi|28195 : GTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--AAA-CGGCTTAGCAA-AT-G----CC------ATG-AAACACACCAGGCAGCAT
gi|28197 : GTAATCTGTACTCAAAA-TCA-GCGTAT-A-A-A--GAA-CACCGTAACAA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|28198 : GTAAACTGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-GAGCACT------ATT-AAACACTTCAGACAGCAT
gi|28221 : TAATCCGTAGTCAACA-TCA-GTGTAT-A-A-A--GAA-CGGCCTAACAA-CC-G----TT------ATG-AAACACGTTAGACAGCAT
gi|28223 : TAATCCGTAGTCGAAA-TCA-GTATAT-A-A-A--GAA-CGGCTTTACAA-TT-G----CT------ATG-AAACACCTCAGAAAGCAT
gi|28244 : AATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATA-AAACACATCAGACAGCAT
gi|28253 : AATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28255 : AATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28260 : AATCCGTAATCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTT-ACAA-TT-G----CT------ATG-AAACACGT-AGACAACAT
gi|28261 : AATCCGTAGTCAAA--TCA-GTGTGT-A-A-A--AAA-CGGCTTAACAA-TG-G----CT------ATG-AAACACATCAGACAGCAT
gi|28262 : AATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TG-G----TT------ATG-AAACACATCAGACAGCAT
gi|28264 : AATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TG-G----TT------ATG-AAACACATCAGACAGCAT
gi|28267 : AATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CAGCTTAACAA-TT-C----CT------ATG-AAGCACGTCATACAGAAT
gi|28272 : AATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CTGTTTAAAAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28379 : ATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-TGGCTTAATAA-TT-A----CT------ATG-AAACACGTCAGACAGCAT
Alignments
lowQualScore : 55 0 0 0 0 11 0 0 0 0000 111111 0
lowQualScore : .. . . . . .. . . . .... ...... .
lowQualScore : 99 4 4 4 4 00 4 4 4 8888 111111 4
consensus : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGCAT
Reference ( family-72 ) : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGCAT
gi|27934 : AGTAATCCGTAGTCAAAA-TCA-GTATAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGCCAGACAGCAT
gi|27936 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCCCAACAA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|27937 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAAAAA-TT-G----GT------ATG-AAACATGTCAGACA
gi|27938 : AGTAATATGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ACG-AAACACGTCAGACAGCAT
gi|27939 : AGTAGTCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-A----TT------ATG-AAACACATCAGACAGCAT
gi|27941 : AGTAACCCGTTGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAGCAA-TT-G----TT------ATG-AAACACGTCATACAGCAT
gi|27942 : AGTAATCCGTAGTCAAAA-TCA-GTGCGT-A-A-A--GAA-CGGCCTAACAA-TT-G----GT------ATG-AAGCACGTCAGACAGCAT
gi|27943 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CAGCTAAACAA-TT-G----AT------ATG-AAACACATCAGACAGCAT
gi|27944 : AGTAGTCCTTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCCTAAGAA-TT-G----GT------ATG-AAACATGTCAGACAGCAT
gi|27945 : AGTAATCTGTATTCAAA--TCA-GTGTAT-G-A-A--AAA-CGACTTAATAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27950 : AGTAAACCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGTCTAA-AA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|27951 : AGTAATCCGTAGTCAAAA-TCG-GTGTAT-A-A-T--GAA-TGGCTTAACAA-TT-G----CT------ATG-AAACATGTCAGACAGCAT
gi|27953 : AGTAATCCGTAGTCGAAA-TCT-GTGTAT-A-A-A--GAA-CGGTTTAATAA-TT-G----CT------ACG-AAACACGTCAGACAGCAT
gi|27954 : AGTAATCCGTAGTCAAAA-TCA-GTGTAC-A-G-A--AAA-CGGCTTAATAA-TT-G----AT------ATG-AAACACGCCAGACAGCAT
gi|27955 : AGTAATCCGTAATCAAAA-CCG-ATGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGC
gi|27958 : AGCAATCTGTAGTCAAAA-TCA-GAGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACATCAT
gi|27961 : AGTAATCCGTAGTCAAAA-TCAAGTGTAT-A-A-A--GAA-TTGTTTAAGAA-TT-G----TT------GTG-AAACACATCAGACAGCAT
gi|27962 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-G--GAA-CGGCTTAAC----T-G----CT------ATA-AAACACATCAGACAGCAT
gi|27963 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATA-AAACACATCAGACAGCAT
gi|27964 : AGTAATCCGTAGTCAAAA-CCA-GTGTAT-A-T-A--GAA-CGGCTTAACGA-TT-G----TC------ATG-AAACATGACAGACAGCAT
gi|27966 : AGTAATCCGTAGTCAAAA-TCA-ATGTAT-T-A-A--GAA-CGGCTT-ACAA-TT-G----CT------ATG-ATACACGTCAGACAGCAT
gi|27967 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACA
gi|27968 : AGTAATCCGTAGTCAAAA-TCA-GTGTTT-A-A-A--GAA-CGACCTAACAA-TT-G----GT------ATG-TAACACGTCAGACAGCA
gi|27969 : AGTAACCCGTAGTCAAAG-TCG-GTGTGT-A-A-A--GAA-CAGCCTAAATA-TT-G----TT------ATG-AAACACGTCAGACAGGAT
gi|27973 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAATAA-TT-G----CT------ATG-CAACACATCAGACAGCAT
gi|27975 : AGTAATCCTTAGTCAAAA-CCA-ATGTAT-A-A-A--GGA-CAGCTTCAAAA-TT-G----TC------ATG-AAACACATCAGACAGCAT
gi|27976 : AGTAATCTATAGTCAAAA-TCA-GTGCAC-A-A-A--GAA-CAGCTTAACAA-TT-G----GT------ATA-AAACACGTCAGACAGCAT
gi|27978 : AGTAATCCGTAGTCAAA--TCA-GTGTAG-G-A-A--AAA-CGGCTTTAAAA-TT-G----TT------ATG-AAACACATCAGACAACAT
gi|27980 : AGCAATCTGTAGTCAAAA-TCA-GTATAT-A-A-A--GAA-CAACTTAACAA-TT-G----CT------TTG-AAACACGTCAGACAGCAT
gi|27983 : AGTAATCCGTAGTCAAAA-TCA-CTGTAT-G-G-A--AAA-CGGCTTAACAA-TT-G----CT------AAG-AAACACGTCAGACAGCA
gi|27984 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-G--GAG-CAGCTTAACTA-TT-G----CA------ATG-AAACACTTCAGACAGCAT
gi|27986 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAGCACATCAGACAGCAT
gi|27987 : AGTAATTCGTAGTCAAA--TCA-GTATAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27988 : AGCAATTCGTAGTCAAAA-TCA-GTATAT-G-A-A--GAA-CGGTTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGTAT
gi|27989 : AGCAATCCGTAGTCAAAA-TCA-GTGTGT-G-A-A--AAAACGGCTTAACAA-TG-G----TT------ATG-GAACACATCAGACAGCAT
gi|27992 : AGTAATCTGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCCTAACAA-TT-G----GT------ATG-ACACATGTCAGACAACAT
gi|27993 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-G--GAA-CGGCTGAACAA-TT-G----CC------AAG-AAACACGTTAGACAGTAT
gi|27997 : AGTAATCCGTAGTAAAAA-TTG-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----TT------ATG-AGATACGTCAAACATCAT
gi|27998 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-A-A-A---AA-TGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27999 : AGTAATCCGTAGT-GAAA-TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28007 : AGTAATCCGTAGTTAAAA-TCA-GTGTAT-A-A-A--GAA-CGCCTTAACAA-TT-G----GT------ATGAAAAAATGTCAGACAGCAT
gi|28008 : AGCAATCCGTAGTCAAA--TCA-GTGTAC-G-A-A--AAT-CGGCTTAACAA-TT-G----TT------ATG-AAACACATCAGACAGCAT
gi|28009 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------TTG-AAACACATCTGACAGCAT
gi|28010 : AGTAATCCGTAGTCAAAA-TAT-GTGTAT-A-A-A--GAA-CGGCTTAACAT-TT-G----CT------ATA-AAACAAGTCAGACAGCAT
gi|28013 : AGTAATCCGTAGTAAAAA-CCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAATACACCAGACAGCAT
gi|28015 : AGAAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAAACAGCAT
gi|28016 : AGTAATCCATAGTCAAAA-TCT-GTGTAT-A-A-A--GAA-CGGCTAATCAA-TT-G----CT------ATG-AAACTCGTCAGACAGCAT
gi|28017 : AGTAATCAGTAGTCAAAA-GCA-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-GAACACGTCAAACA
gi|28018 : AGTAATGCGTAGTCAAAAATCG-GTGTAT-A-A-A--GAA-CAGCTTAACAA-TG-G----CT------ATG-AAACACGTCAGGCAGCAT
gi|28019 : AATAATCCGTAGTCAAAA-TCT-GTCTAT-A-A-AA-GAA-CGACTTAATAA-TT-G----AT------ATG-AAACACGTCAGACAGCAT
gi|28020 : AATAATCCGTAGTCAAAA-TCT-GTCTAT---A-A--GAA-CGACTTAATAA-TT-G----AT------ATG-AAACACGTCAGACAGCAT
gi|28022 : AGTAATACGTAGTCAACA-TCA-TTGTAT-A-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACGCATCAGACAGCAT
gi|28023 : AGCAATCCCTAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-CT-G----TT------ATG-AAAAACGTCAGACATCAT
gi|28024 : AGTAATCCGTAGTCAAAA-TCA-GTCTAT-A-A-G--GAA-CGGTCTAACAA-TT-G----GT------ATG-AAACACTTCAGACAGTAT
gi|28029 : AGTAATCCGTAGTCCAAA-TCA-GTGCAC-A-A-A--GAA-CGGCATAACAA-TT-G----GT------ATG-AAACACATCAGACAACAT
gi|28032 : AGTAATCCGTAGTCAAAA-TCG-GTGTAT-TCA-A--GAA-TGGCTAAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28033 : AGTAATCCACAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----TT------ATG-AAACACGTCAGATAG
gi|28034 : AATAATCCGAAGTCAAAA-TCA-GTTTAT-A-G-A--GAA-TGGCTTAACAG-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|28036 : AGCAATCCATAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGACTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28037 : AGTAATCTATAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTCAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28039 : AGTAATCCGTAGT-AAAA-TCA-GTGTAT-G-A-A--AAC-CGGTTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28040 : AGCAATCCGCAGTCAAAA-TAA-GTGTGT-A-A-A--GAA-CGGCTTAACAA-TT-G----CC------AAG-AAACACATCAGACAGCAT
gi|28042 : AGTAATCCGTTTTCAAAG-TCA-GTGCGT-A-A-A--GAA-CTGCTTAAGAA-TT-G----CT------ATG-AAACGCGTCAGACAGCAT
gi|28043 : AGTAATCCGTAGTAAAAA-TCA-ATGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCGTACAGCAT
gi|28048 : AGTAATCCGCAGTCAAAA-TCA-ATGTAT-G-A-A--AAA-CTGCTTAACAA-TT-G----CT------ATG-AAACATGTTAGACAGCA
gi|28050 : AGTAATCCGCAGTCAAAA-TCA-GTGAAT-G-A-A--AAA-CGGCTTAA-AA-TTCG----CT------ATT-GAACACGTCAGACAGCAT
gi|28051 : AATAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--GAA-CGGCCAAACAA-TT-G----AT------ATG-AAACATGTCAGACAGCAT
gi|28052 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGTTTAACAA-TT-G----CT------ATG-AAACACAT-AGACAGCAT
gi|28054 : AGTAATCCGTAGTTAAAA-CCA-GTGTATAG-AGA--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAGCACTTCAGACAACAT
gi|28055 : AATAATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TG-G----CT------ATG-AAACACATCAGACAGCAT
gi|28058 : AGTAATCCATAGTCCAAA-TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAG-TT-G----CT------ATG-AAACGTATCAGACAGCAT
gi|28059 : AGTAATCCGTAGTCAAA--TCA-GGGTAT-G-A-A--AAA-CAGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28061 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACTA-TT-G----CT------ATG-AAATACATCAGACAGCAT
gi|28062 : AGTAATCGGTAGTCAAAA-TCA-GTGTAA-A-A-A--GAA-CGGTCTAACAA-TT-G----AT------ATA-AAACACGTCAGACAGAAT
gi|28064 : AGTAATCAGCAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-TGACTTAACGA-TT-G----TT------ATG-AAACATGTCAGGCAGCAT
gi|28065 : AGTAATCCATAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-TGGCTTAACAA-TT-G----CT------AGA-AAACACATCAGACAGC
gi|28066 : AGTAATTCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAA----TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28068 : AGTAATCCGTTGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGCTTTAACAATTT-G----CC------ATG-AAACGCGTCAGACAGCGT
gi|28069 : AATAATCCGTAGTAACAA-TCA-GTGTAT-G-A-A--CAA-CAGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28070 : AGTAATCCGTAGTCAAAA-TCA-GAGTAT-A-A-AACAAA-CGGCTTAACAA-TT-G----CTACATGCATG-AAATACGTCAGACAGCAT
gi|28187 : GTAATCTGTAGTCAAAA-TCT-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TC-G----CT------ATG-AAACACATCAGACAGCAT
gi|28188 : GCAATCCGTAGTCAAA--CCA-GTGTAT-A-A-A---AA-CGGCTTAAGAA-TT-G----CT------ATG-AAACACATCAGACATCAT
gi|28189 : GTAATCCGTGGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGTTTAACAA-AT-G----CT------ATG-AAACGCGTCACACAGCAT
gi|28192 : GCAATCCGCAGTCAAAA-TCA-GTGCAT-G-A-A--AAA-CAGCTTAACAA-TT-G----CT------ATG-AAACATGTCAGACAGCAT
gi|28193 : GTAATTCGTAGTCAATA-TCA-GTGCAT-A-A-A--GAA-CGGCTTAACAA-GT-G----CT------ATG-AAACACGTCAAACAG
gi|28195 : GTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--AAA-CGGCTTAGCAA-AT-G----CC------ATG-AAACACACCAGGCAGCAT
gi|28197 : GTAATCTGTACTCAAAA-TCA-GCGTAT-A-A-A--GAA-CACCGTAACAA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|28198 : GTAAACTGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-GAGCACT------ATT-AAACACTTCAGACAGCAT
gi|28221 : TAATCCGTAGTCAACA-TCA-GTGTAT-A-A-A--GAA-CGGCCTAACAA-CC-G----TT------ATG-AAACACGTTAGACAGCAT
gi|28223 : TAATCCGTAGTCGAAA-TCA-GTATAT-A-A-A--GAA-CGGCTTTACAA-TT-G----CT------ATG-AAACACCTCAGAAAGCAT
gi|28244 : AATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATA-AAACACATCAGACAGCAT
gi|28253 : AATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28255 : AATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28260 : AATCCGTAATCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTT-ACAA-TT-G----CT------ATG-AAACACGT-AGACAACAT
gi|28261 : AATCCGTAGTCAAA--TCA-GTGTGT-A-A-A--AAA-CGGCTTAACAA-TG-G----CT------ATG-AAACACATCAGACAGCAT
gi|28262 : AATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TG-G----TT------ATG-AAACACATCAGACAGCAT
gi|28264 : AATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TG-G----TT------ATG-AAACACATCAGACAGCAT
gi|28267 : AATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CAGCTTAACAA-TT-C----CT------ATG-AAGCACGTCATACAGAAT
gi|28272 : AATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CTGTTTAAAAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28379 : ATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-TGGCTTAATAA-TT-A----CT------ATG-AAACACGTCAGACAGCAT
blockSeqs : AA ACATGC
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : G .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
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blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : G .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
blockSeqs : A .
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blockSeqs : A .
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blockSeqCons :
originalCons : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGCAT
finalCons : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGCAT
Alignments
lowQualScore : 55 0 0 0 0 11 0 0 0 0000 111111 0
lowQualScore : .. . . . . .. . . . .... ...... .
lowQualScore : 99 4 4 4 4 00 4 4 4 8888 111111 4
consensus : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGCAT
Reference ( family-72 ) : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGCAT
gi|27934 : AGTAATCCGTAGTCAAAA-TCA-GTATAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGCCAGACAGCAT
gi|27936 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCCCAACAA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|27937 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAAAAA-TT-G----GT------ATG-AAACATGTCAGACA
gi|27938 : AGTAATATGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ACG-AAACACGTCAGACAGCAT
gi|27939 : AGTAGTCCGTAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-A----TT------ATG-AAACACATCAGACAGCAT
gi|27941 : AGTAACCCGTTGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAGCAA-TT-G----TT------ATG-AAACACGTCATACAGCAT
gi|27942 : AGTAATCCGTAGTCAAAA-TCA-GTGCGT-A-A-A--GAA-CGGCCTAACAA-TT-G----GT------ATG-AAGCACGTCAGACAGCAT
gi|27943 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CAGCTAAACAA-TT-G----AT------ATG-AAACACATCAGACAGCAT
gi|27944 : AGTAGTCCTTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCCTAAGAA-TT-G----GT------ATG-AAACATGTCAGACAGCAT
gi|27945 : AGTAATCTGTATTCAAA--TCA-GTGTAT-G-A-A--AAA-CGACTTAATAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27950 : AGTAAACCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGTCTAA-AA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|27951 : AGTAATCCGTAGTCAAAA-TCG-GTGTAT-A-A-T--GAA-TGGCTTAACAA-TT-G----CT------ATG-AAACATGTCAGACAGCAT
gi|27953 : AGTAATCCGTAGTCGAAA-TCT-GTGTAT-A-A-A--GAA-CGGTTTAATAA-TT-G----CT------ACG-AAACACGTCAGACAGCAT
gi|27954 : AGTAATCCGTAGTCAAAA-TCA-GTGTAC-A-G-A--AAA-CGGCTTAATAA-TT-G----AT------ATG-AAACACGCCAGACAGCAT
gi|27955 : AGTAATCCGTAATCAAAA-CCG-ATGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACAGC
gi|27958 : AGCAATCTGTAGTCAAAA-TCA-GAGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACATCAT
gi|27961 : AGTAATCCGTAGTCAAAA-TCAAGTGTAT-A-A-A--GAA-TTGTTTAAGAA-TT-G----TT------GTG-AAACACATCAGACAGCAT
gi|27962 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-G--GAA-CGGCTTAAC----T-G----CT------ATA-AAACACATCAGACAGCAT
gi|27963 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATA-AAACACATCAGACAGCAT
gi|27964 : AGTAATCCGTAGTCAAAA-CCA-GTGTAT-A-T-A--GAA-CGGCTTAACGA-TT-G----TC------ATG-AAACATGACAGACAGCAT
gi|27966 : AGTAATCCGTAGTCAAAA-TCA-ATGTAT-T-A-A--GAA-CGGCTT-ACAA-TT-G----CT------ATG-ATACACGTCAGACAGCAT
gi|27967 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACGTCAGACA
gi|27968 : AGTAATCCGTAGTCAAAA-TCA-GTGTTT-A-A-A--GAA-CGACCTAACAA-TT-G----GT------ATG-TAACACGTCAGACAGCA
gi|27969 : AGTAACCCGTAGTCAAAG-TCG-GTGTGT-A-A-A--GAA-CAGCCTAAATA-TT-G----TT------ATG-AAACACGTCAGACAGGAT
gi|27973 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAATAA-TT-G----CT------ATG-CAACACATCAGACAGCAT
gi|27975 : AGTAATCCTTAGTCAAAA-CCA-ATGTAT-A-A-A--GGA-CAGCTTCAAAA-TT-G----TC------ATG-AAACACATCAGACAGCAT
gi|27976 : AGTAATCTATAGTCAAAA-TCA-GTGCAC-A-A-A--GAA-CAGCTTAACAA-TT-G----GT------ATA-AAACACGTCAGACAGCAT
gi|27978 : AGTAATCCGTAGTCAAA--TCA-GTGTAG-G-A-A--AAA-CGGCTTTAAAA-TT-G----TT------ATG-AAACACATCAGACAACAT
gi|27980 : AGCAATCTGTAGTCAAAA-TCA-GTATAT-A-A-A--GAA-CAACTTAACAA-TT-G----CT------TTG-AAACACGTCAGACAGCAT
gi|27983 : AGTAATCCGTAGTCAAAA-TCA-CTGTAT-G-G-A--AAA-CGGCTTAACAA-TT-G----CT------AAG-AAACACGTCAGACAGCA
gi|27984 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-G--GAG-CAGCTTAACTA-TT-G----CA------ATG-AAACACTTCAGACAGCAT
gi|27986 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAGCACATCAGACAGCAT
gi|27987 : AGTAATTCGTAGTCAAA--TCA-GTATAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27988 : AGCAATTCGTAGTCAAAA-TCA-GTATAT-G-A-A--GAA-CGGTTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGTAT
gi|27989 : AGCAATCCGTAGTCAAAA-TCA-GTGTGT-G-A-A--AAAACGGCTTAACAA-TG-G----TT------ATG-GAACACATCAGACAGCAT
gi|27992 : AGTAATCTGTAGTCAAAA-TCA-GTGTAT-G-A-A--GAA-CGGCCTAACAA-TT-G----GT------ATG-ACACATGTCAGACAACAT
gi|27993 : AGTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-G--GAA-CGGCTGAACAA-TT-G----CC------AAG-AAACACGTTAGACAGTAT
gi|27997 : AGTAATCCGTAGTAAAAA-TTG-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----TT------ATG-AGATACGTCAAACATCAT
gi|27998 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-A-A-A---AA-TGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|27999 : AGTAATCCGTAGT-GAAA-TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28007 : AGTAATCCGTAGTTAAAA-TCA-GTGTAT-A-A-A--GAA-CGCCTTAACAA-TT-G----GT------ATGAAAAAATGTCAGACAGCAT
gi|28008 : AGCAATCCGTAGTCAAA--TCA-GTGTAC-G-A-A--AAT-CGGCTTAACAA-TT-G----TT------ATG-AAACACATCAGACAGCAT
gi|28009 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------TTG-AAACACATCTGACAGCAT
gi|28010 : AGTAATCCGTAGTCAAAA-TAT-GTGTAT-A-A-A--GAA-CGGCTTAACAT-TT-G----CT------ATA-AAACAAGTCAGACAGCAT
gi|28013 : AGTAATCCGTAGTAAAAA-CCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAATACACCAGACAGCAT
gi|28015 : AGAAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAAACAGCAT
gi|28016 : AGTAATCCATAGTCAAAA-TCT-GTGTAT-A-A-A--GAA-CGGCTAATCAA-TT-G----CT------ATG-AAACTCGTCAGACAGCAT
gi|28017 : AGTAATCAGTAGTCAAAA-GCA-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-G----CT------ATG-GAACACGTCAAACA
gi|28018 : AGTAATGCGTAGTCAAAAATCG-GTGTAT-A-A-A--GAA-CAGCTTAACAA-TG-G----CT------ATG-AAACACGTCAGGCAGCAT
gi|28019 : AATAATCCGTAGTCAAAA-TCT-GTCTAT-A-A-AA-GAA-CGACTTAATAA-TT-G----AT------ATG-AAACACGTCAGACAGCAT
gi|28020 : AATAATCCGTAGTCAAAA-TCT-GTCTAT---A-A--GAA-CGACTTAATAA-TT-G----AT------ATG-AAACACGTCAGACAGCAT
gi|28022 : AGTAATACGTAGTCAACA-TCA-TTGTAT-A-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACGCATCAGACAGCAT
gi|28023 : AGCAATCCCTAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-CT-G----TT------ATG-AAAAACGTCAGACATCAT
gi|28024 : AGTAATCCGTAGTCAAAA-TCA-GTCTAT-A-A-G--GAA-CGGTCTAACAA-TT-G----GT------ATG-AAACACTTCAGACAGTAT
gi|28029 : AGTAATCCGTAGTCCAAA-TCA-GTGCAC-A-A-A--GAA-CGGCATAACAA-TT-G----GT------ATG-AAACACATCAGACAACAT
gi|28032 : AGTAATCCGTAGTCAAAA-TCG-GTGTAT-TCA-A--GAA-TGGCTAAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28033 : AGTAATCCACAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----TT------ATG-AAACACGTCAGATAG
gi|28034 : AATAATCCGAAGTCAAAA-TCA-GTTTAT-A-G-A--GAA-TGGCTTAACAG-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|28036 : AGCAATCCATAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGACTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28037 : AGTAATCTATAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTCAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28039 : AGTAATCCGTAGT-AAAA-TCA-GTGTAT-G-A-A--AAC-CGGTTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28040 : AGCAATCCGCAGTCAAAA-TAA-GTGTGT-A-A-A--GAA-CGGCTTAACAA-TT-G----CC------AAG-AAACACATCAGACAGCAT
gi|28042 : AGTAATCCGTTTTCAAAG-TCA-GTGCGT-A-A-A--GAA-CTGCTTAAGAA-TT-G----CT------ATG-AAACGCGTCAGACAGCAT
gi|28043 : AGTAATCCGTAGTAAAAA-TCA-ATGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCGTACAGCAT
gi|28048 : AGTAATCCGCAGTCAAAA-TCA-ATGTAT-G-A-A--AAA-CTGCTTAACAA-TT-G----CT------ATG-AAACATGTTAGACAGCA
gi|28050 : AGTAATCCGCAGTCAAAA-TCA-GTGAAT-G-A-A--AAA-CGGCTTAA-AA-TTCG----CT------ATT-GAACACGTCAGACAGCAT
gi|28051 : AATAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--GAA-CGGCCAAACAA-TT-G----AT------ATG-AAACATGTCAGACAGCAT
gi|28052 : AGTAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGTTTAACAA-TT-G----CT------ATG-AAACACAT-AGACAGCAT
gi|28054 : AGTAATCCGTAGTTAAAA-CCA-GTGTATAG-AGA--GAA-CGGCTTAACAA-TT-G----CT------ATG-AAGCACTTCAGACAACAT
gi|28055 : AATAATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TG-G----CT------ATG-AAACACATCAGACAGCAT
gi|28058 : AGTAATCCATAGTCCAAA-TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAG-TT-G----CT------ATG-AAACGTATCAGACAGCAT
gi|28059 : AGTAATCCGTAGTCAAA--TCA-GGGTAT-G-A-A--AAA-CAGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28061 : AGCAATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACTA-TT-G----CT------ATG-AAATACATCAGACAGCAT
gi|28062 : AGTAATCGGTAGTCAAAA-TCA-GTGTAA-A-A-A--GAA-CGGTCTAACAA-TT-G----AT------ATA-AAACACGTCAGACAGAAT
gi|28064 : AGTAATCAGCAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-TGACTTAACGA-TT-G----TT------ATG-AAACATGTCAGGCAGCAT
gi|28065 : AGTAATCCATAGTCAAAA-TCA-GTGTAT-G-A-A--AAA-TGGCTTAACAA-TT-G----CT------AGA-AAACACATCAGACAGC
gi|28066 : AGTAATTCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAA----TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28068 : AGTAATCCGTTGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGCTTTAACAATTT-G----CC------ATG-AAACGCGTCAGACAGCGT
gi|28069 : AATAATCCGTAGTAACAA-TCA-GTGTAT-G-A-A--CAA-CAGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28070 : AGTAATCCGTAGTCAAAA-TCA-GAGTAT-A-A-AACAAA-CGGCTTAACAA-TT-G----CTACATGCATG-AAATACGTCAGACAGCAT
gi|28187 : GTAATCTGTAGTCAAAA-TCT-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TC-G----CT------ATG-AAACACATCAGACAGCAT
gi|28188 : GCAATCCGTAGTCAAA--CCA-GTGTAT-A-A-A---AA-CGGCTTAAGAA-TT-G----CT------ATG-AAACACATCAGACATCAT
gi|28189 : GTAATCCGTGGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGTTTAACAA-AT-G----CT------ATG-AAACGCGTCACACAGCAT
gi|28192 : GCAATCCGCAGTCAAAA-TCA-GTGCAT-G-A-A--AAA-CAGCTTAACAA-TT-G----CT------ATG-AAACATGTCAGACAGCAT
gi|28193 : GTAATTCGTAGTCAATA-TCA-GTGCAT-A-A-A--GAA-CGGCTTAACAA-GT-G----CT------ATG-AAACACGTCAAACAG
gi|28195 : GTAATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--AAA-CGGCTTAGCAA-AT-G----CC------ATG-AAACACACCAGGCAGCAT
gi|28197 : GTAATCTGTACTCAAAA-TCA-GCGTAT-A-A-A--GAA-CACCGTAACAA-TT-G----GT------ATG-AAACACGTCAGACAGCAT
gi|28198 : GTAAACTGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTTAACAA-TT-GAGCACT------ATT-AAACACTTCAGACAGCAT
gi|28221 : TAATCCGTAGTCAACA-TCA-GTGTAT-A-A-A--GAA-CGGCCTAACAA-CC-G----TT------ATG-AAACACGTTAGACAGCAT
gi|28223 : TAATCCGTAGTCGAAA-TCA-GTATAT-A-A-A--GAA-CGGCTTTACAA-TT-G----CT------ATG-AAACACCTCAGAAAGCAT
gi|28244 : AATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATA-AAACACATCAGACAGCAT
gi|28253 : AATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAGCAT
gi|28255 : AATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CGGCTTAACAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28260 : AATCCGTAATCAAAA-TCA-GTGTAT-A-A-A--GAA-CGGCTT-ACAA-TT-G----CT------ATG-AAACACGT-AGACAACAT
gi|28261 : AATCCGTAGTCAAA--TCA-GTGTGT-A-A-A--AAA-CGGCTTAACAA-TG-G----CT------ATG-AAACACATCAGACAGCAT
gi|28262 : AATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TG-G----TT------ATG-AAACACATCAGACAGCAT
gi|28264 : AATCCGTAGTCAAA--TCA-GTGTGT-G-A-A--AAA-CGGCTTAACAA-TG-G----TT------ATG-AAACACATCAGACAGCAT
gi|28267 : AATCCGTAGTCAAAA-TCA-GTGTAT-A-A-A--GAA-CAGCTTAACAA-TT-C----CT------ATG-AAGCACGTCATACAGAAT
gi|28272 : AATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-CTGTTTAAAAA-TT-G----CT------ATG-AAACACATCAGACAACAT
gi|28379 : ATCCGTAGTCAAA--TCA-GTGTAT-G-A-A--AAA-TGGCTTAATAA-TT-A----CT------ATG-AAACACGTCAGACAGCAT