lowQualScore : 11111 11 111
lowQualScore : 22 3 33333 77 3 1 22 1 1 0 3 1 1 4 1 1 1 1 111 5 1 3 333 1 44 1
lowQualScore : .. . ..... .. . . .. . . . . . . . . . . . ... . . . ... . .. .
lowQualScore : 44 5 22222 77 3 7 33 7 7 2 0 7 7 3 7 7 7 7 222 2 7 5 000 8 33 1
consensus : ATTT--AACTTCAA-TGAAN----TT--GTT-AT-GT--AAA-GG-CACCGTAT-G-GNA-TA-AAC-AT-GA---GA-ACACC-TTGA-GTG---TG-TATA--ACTATCT
Reference ( gi|73469 ) : ATTT--AACTTCAA-TGAAA----TT--GTT-AT-GT--AAA-GG-CACCATGT-G-GTA-TA-AAC-AT-GA---GA-ACACC-TTGA-GTG---TG-TATA--ACTATCT
gi|73471 : ATTT--AACTTCAA-TGAAC----TT--TTT-AT-GT--AAA-GG-CACCATAT-G-GTA-TA-AAC-AT-GA---AA-ACACC-TTGA-GTG---TG-TATA--ACTATCT
gi|73473 : ATTT--AACTTCAA-TGAAC----TT--GTT-AT-GT--AAA-GG-CACCATAT-G-ATA-TA-AAC-AT-GA---GA-ACACC-TTGA---G---TG-CATA--ACTATCT
gi|73474 : ATTT--AACTTCAA-TGAAC----TA--GTT-AT-GT--AAA-AG-CACCATGT-G-GTA-TA-AAC-AT-GA---GA-ATGCC-TTGA-GTC---TG-TATA--ACTATCT
gi|73472 : ATTT--AACTTCAA-TGAAC----TT--GTT-AT-GT--AAA-GG-CACGATAT-G-GTG-TA-AAC-AT-GA---GA-ACACC-TTGA-GTG---TG-TATA--AC
gi|73470 : ATTTTAAACTTCAA-TGAAA----TTT-GTT-AT-GT--AAACGG-CACCATGT-G-GTA-TTTAAC-ATAGA---GA-ACACC-TTGA-GTGTGTTG-TATA--ACTAGCT
gi|73475 : ATTT--AACTTCAA-TGAAC----TT--GTT-AT-GT--TTA-G--C-CCATG----GTT-TA-AAC-AT-GA---GA--CACC-TTGA-GTG---TG-TATA--ACTATCT
gi|73477 : ATTT--AACTTCAA-TGAAA----TTTTGTT-AT-GT--AAA-GG-CACCATGT-G-GGA-TA--------------A-ACACC-ATGA-GTG---TG-TATA--ACAAT
gi|73476 : ATTT--AACTTCAT-CGAGA----TTTTGTT-AT-GT--AAA-GG-CACCATAT-G-GGA-TC-ATT-AC-GAT--AA-ACACC-TTGA-GTG---TG-TATA--ACAAT
gi|73478 : ATTT--AACTTCAA-TGAAATT--TT--GTC-ATGGTTGAAA-GG-CATTGTAT-G-GGA-TA-AGC-AT-GA---TACACACC-TTGA-GTG---TG-TATA--
gi|73479 : ATTT--AACTTCAA-TGAAA----TTTTGTC-AT-GT--AAA-GG-CATCGTAT-G-GGA-TA--------------A-ACACC-TTAG-GTG---TG-TATA--A
gi|73481 : ATTT--AACTTCAA-TGAAC----TT--GTT-A--------------------------A-TA-TAC-AT-GA---GA-ACACC-TTGA-GTG---GG-TATA--ACTATCT
gi|73480 : ATTT--GACTTCAA-ATAAA----T------------------GG-CAACATAT-G-GAA-TA-AAC-AT-GAT--AA-ACACC-TTGA-GTG---TG-TATA--ACAAT
gi|73482 : ATTT--AACTTCAA-TGAAAT---TT--GTC-AT-GC--AAA-GG-CATCGTAA-GAGAA-TA-AAC-A---A---GATACACA-TGGATGTG---T--TATA--ACAAT
gi|73484 : TTG--AACTTCAA-TG-AC----TT--GTTAAT-GT--AAA-GG-CACCATAT-G-GTA-TA-AAC-AT--A---GA-ACACC-TTGA-GTG---TG-TATA--ACTATCT
gi|73485 : TTG--AACTTCAA-TGAC-----TT--GTT-AT-GT--AAA-GG-CACCATAT-G-TTA-TA-AAC-AT-GA---GA-ACACC-TTGATGTG---T--TATA--ACTATCT
gi|73483 : TTC--AACTTCAAATGAAC----TT--TTTTAT-GT--AAA-GG-C--CATATTG-GTA-TA-AAC-AT-GA---AA-ACA-C-TTGA-GTG---TG-TATAC-ACTATCT
gi|73486 : TTT--AACTTCAACTGAAAAATTTT--GTC-AT-GT--AAA-AG-CACCGTAT-G-A-A-CA-AAC-AT-GATGCAA-ACACCTTTGA-GTG---TG-TATAACACTATC
gi|73488 : TT--AAACTCAA-TGAAC----TTTTGTT-AT-GT--AAA-GA-CACCATAT-A-GTA-TA-AAC-AT-GA---GA-ACACC-TTGA-GTG---TG-TATA--ACAATCT
gi|73490 : TT--AACTTCAA-TGAAC----TT--GTT-AT-GT--TAA-GC-CA-CATGT----T--TA-AAC-AT-GA---GA---ACC-TTGA-GTG---TG-TATA--ACTATCT
gi|73489 : TT--AACTT-AA-TGAAA----TTTCGTT-AT-GT--AAA-GG-CATCGTAT-G-AAA-TA-AAC-AT-GAT--AA-ACACC-CTGA-GTG---TG-TATA--ACAAT
gi|73487 : TT--AACTTCAA-TGAAC----TT--GTT-AT-G---AAA-GGCCAACATAT---CTATTA-AACAAT-GA---GAGACACC-TTGA-GTG---
gi|73491 : TT--AACTTCAA-TGAAT----TTTTGTC-AT-GT--AAA-GG-CACCTTAT-G-GGA-TA-AAC-AT-GA---
gi|73492 : --AACTTCAA-TGAAA----TTTCGCC-AT-GT--AAA-GA-CATCATAT-G-GGA-CA-A-C-AT-GAT--AA-ACACC-TTGA-GTG---TGATATA--ACAAT
gi|73493 : ----TT--GTC-AT-GT--AAA-GG-CGTTGTAT-G-GGA--A-AAT-AT-GAT--AA-ACACC-TCGA-GTG---TA-TATG--AC
Alignments
lowQualScore : 22 111
lowQualScore : 22 3 55555 00 3 22 1 3 1 4 1 1 1 1 1 1 000 5 1 222 5 44 0
lowQualScore : .. . ..... .. . .. . . . . . . . . . . ... . . ... . .. .
lowQualScore : 33 3 00000 88 2 22 6 2 6 6 6 6 6 6 6 6 888 0 7 999 2 11 6
consensus : ATTT--AACTTCAA-TGAAC----TTT-GTT-ATG--T-AAA-GG-CACCGTAT-G-GNATA-AAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
Reference ( family-715 ) : ATTT--AACTTCAA-TGAAN----TT--GTT-ATG--T-AAA-GG-CACCGTAT-G-GNATA-AAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73469 : ATTT--AACTTCAA-TGAAA----TT--GTT-ATG--T-AAA-GG-CACCATGT-G-GTATA-AAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73470 : ATTTTAAACTTCAA-TGAAA----TTT-GTT-ATG--T-AAACGG-CACCATGT-G-GTATTTAAC-ATAGA---GA-ACACC-TTGAGTGTGTTG-TATA--ACTAGCT
gi|73471 : ATTT--AACTTCAA-TGAAC----TT--TTT-ATG--T-AAA-GG-CACCATAT-G-GTATA-AAC-AT-GA---AA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73472 : ATTT--AACTTCAA-TGAAC----TT--GTT-ATG--T-AAA-GG-CACGATAT-G-GTGTA-AAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--AC
gi|73473 : ATTT--AACTTCAA-TGAAC----TT--GTT-ATG--T-AAA-GG-CACCATAT-G-ATATA-AAC-AT-GA---GA-ACACC-TTGA--G---TG-CATA--ACTATCT
gi|73474 : ATTT--AACTTCAA-TGAAC----TA--GTT-ATG--T-AAA-AG-CACCATGT-G-GTATA-AAC-AT-GA---GA-ATGCC-TTGAGTC---TG-TATA--ACTATCT
gi|73475 : ATTT--AACTTCAA-TGAAC----TT--GTT-ATG--T-TTA-G----CC-CAT-G-GTTTA-AAC-AT-GA---GA--CACC-TTGAGTG---TG-TATA--ACTATCT
gi|73476 : ATTT--AACTTCAT-CGAGA----TTTTGTT-ATG--T-AAA-GG-CACCATAT-G-GGATC-ATT-AC-GAT--AA-ACACC-TTGAGTG---TG-TATA--ACAAT
gi|73477 : ATTT--AACTTCAA-TGAAA----TTTTGTT-ATG--T-AAA-GG-CACCATGT-G-GGATA--------------A-ACACC-ATGAGTG---TG-TATA--ACAAT
gi|73478 : ATTT--AACTTCAA-TGAAA----TTTTGTC-ATGGTTGAAA-GG-CATTGTAT-G-GGATA-AGC-AT-GA---TACACACC-TTGAGTG---TG-TATA--
gi|73479 : ATTT--AACTTCAA-TGAAA----TTTTGTC-ATG--T-AAA-GG-CATCGTAT-G-GGATA--------------A-ACACC-TTAGGTG---TG-TATA--
gi|73480 : ATTT--GACTTCAA--------------------A--T-AAATGG-CAACATAT-G-GAATA-AAC-AT-GAT--AA-ACACC-TTGAGTG---TG-TATA--ACAAT
gi|73481 : ATTT--AACTTCAA-TGAAC----TT--GTT-A--------------------------ATA-TAC-AT-GA---GA-ACACC-TTGAGTG---GG-TATA--ACTATCT
gi|73482 : ATTT--AACTTCAA-TGAAA----TTT-GTC-ATG--C-AAA-GG-CATCGTAA-GAGAATA-AAC-A---A---GATACACA-TGGA-TG---TGTTATA--ACAAT
gi|73483 : TTC--AACTTCAAATGAAC----TT--TTTTATG--T-AAA-GG-C--CATATTG-GTATA-AAC-AT-GA---AA-ACA-C-TTGAGTG---TG-TATAC-ACTATCT
gi|73484 : TTG--AACTTCAA-TG-AC----TT--GTTAATG--T-AAA-GG-CACCATAT-G-GTATA-AAC-AT--A---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73485 : TTG--AACTTCAA-TGA-C----TT--GTT-ATG--T-AAA-GG-CACCATAT-G-TTATA-AAC-AT-GA---GA-ACACC-TTGA-TG---TGTTATA--ACTATCT
gi|73486 : TTT--AACTTCAACTGAAAAATTTT--GTC-ATG--T-AAA-AG-CACCGTAT---GAACA-AAC-AT-GATGCAA-ACACCTTTGAGTG---TG-TATAACACTATC
gi|73487 : TT--AACTTCAA-TGAAC----TT--GTT-ATG----AAA-GGCCAACATAT-C-TATTA-AACAAT-GA---GAGACACC-TTGAGTG---
gi|73488 : TT--AAACTCAA-TGAAC----TTTTGTT-ATG--T-AAA-GA-CACCATAT-A-GTATA-AAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACAATCT
gi|73489 : TT--AACTT-AA-TGAAA----TTTCGTT-ATG--T-AAA-GG-CATCGTAT-G-AAATA-AAC-AT-GAT--AA-ACACC-CTGAGTG---TG-TATA--ACAAT
gi|73490 : TT--AACTTCAA-TGAAC----TT--GTT-ATG--T-TAA-GC-CAC---AT-G-TT-TA-AAC-AT-GA---GA---ACC-TTGAGTG---TG-TATA--ACTATCT
gi|73491 : TT--AACTTCAA-TGAAT----TTTTGTC-ATG--T-AAA-GG-CACCTTAT-G-GGATA-AAC-AT-GA---
gi|73492 : --AACTTCAA-TGAAA----TTTCGCC-ATG--T-AAA-GA-CATCATAT-G-GGACA-A-C-AT-GAT--AA-ACACC-TTGAGTG---TGATATA--ACAAT
gi|73493 : ----TT--GTC-ATG--T-AAA-GG-CGTTGTAT-G-GGA-A-AAT-AT-GAT--AA-ACACC-TCGAGTG---TA-TATG--AC
Alignments
lowQualScore : 1111 11 111
lowQualScore : 22 3 1 0000 22 1 22 1 3 1 4 1 1 1 1 1 1 000 5 1 222 5 44 0
lowQualScore : .. . . .... .. . .. . . . . . . . . . . ... . . ... . .. .
lowQualScore : 33 3 7 2222 11 6 22 6 2 6 6 6 6 6 6 6 6 888 0 7 999 2 11 6
consensus : ATTT--AACTTCAA-TGA-A---CTTT-GTTA-TG--T-AAA-GG-CACCGTA-TG-GNA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
Reference ( family-715 ) : ATTT--AACTTCAA-TGA-A---CTTT-GTTA-TG--T-AAA-GG-CACCGTA-TG-GNA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73469 : ATTT--AACTTCAA-TGA-A---ATT--GTTA-TG--T-AAA-GG-CACCATG-TG-GTA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73470 : ATTTTAAACTTCAA-TGA-A---ATTT-GTTA-TG--T-AAACGG-CACCATG-TG-GTATTTAAC-ATAGA---GA-ACACC-TTGAGTGTGTTG-TATA--ACTAGCT
gi|73471 : ATTT--AACTTCAA-TGA-A---CTTT--TTA-TG--T-AAA-GG-CACCATA-TG-GTA-TAAAC-AT-GA---AA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73472 : ATTT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-AAA-GG-CACGATA-TG-GTG-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--AC
gi|73473 : ATTT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-AAA-GG-CACCATA-TG-ATA-TAAAC-AT-GA---GA-ACACC-TTGA--G---TG-CATA--ACTATCT
gi|73474 : ATTT--AACTTCAA-TGA-A---CTA--GTTA-TG--T-AAA-AG-CACCATG-TG-GTA-TAAAC-AT-GA---GA-ATGCC-TTGAGTC---TG-TATA--ACTATCT
gi|73475 : ATTT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-TTA-G----CC-CA-TG-GTT-TAAAC-AT-GA---GA--CACC-TTGAGTG---TG-TATA--ACTATCT
gi|73476 : ATTT--AACTTCAT-CGAGA---TTTT-GTTA-TG--T-AAA-GG-CACCATA-TG-GGA-TCATT-AC-GAT--AA-ACACC-TTGAGTG---TG-TATA--ACAAT
gi|73477 : ATTT--AACTTCAA-TGA-AA--TTTT-GTTA-TG--T-AAA-GG-CACCATG-TG-GGA-TA-------------A-ACACC-ATGAGTG---TG-TATA--ACAAT
gi|73478 : ATTT--AACTTCAA-TGA-AA--TTTT-GTCA-TGGTTGAAA-GG-CATTGTA-TG-GGA-TAAGC-AT-GA---TACACACC-TTGAGTG---TG-TATA--
gi|73479 : ATTT--AACTTCAA-TGA-AA--TTTT-GTCA-TG--T-AAA-GG-CATCGTA-TG-GGA-TA-------------A-ACACC-TTAGGTG---TG-TATA--
gi|73480 : ATTT--GACTTCAA--------------------A--T-AAATGG-CAACATA-TG-GAA-TAAAC-AT-GAT--AA-ACACC-TTGAGTG---TG-TATA--ACAAT
gi|73481 : ATTT--AACTTCAA-TGA-A---CTT--GTTA---------------------------A-TATAC-AT-GA---GA-ACACC-TTGAGTG---GG-TATA--ACTATCT
gi|73482 : ATTT--AACTTCAA-TGA-A---ATTT-GTCA-TG--C-AAA-GG-CATCGTA-AGAGAA-TAAAC-A---A---GATACACA-TGGA-TG---TGTTATA--ACAAT
gi|73483 : TTC--AACTTCAAATGA-A---CTTT-TTTA-TG--T-AAA-GG---CCATATTG-GTA-TAAAC-AT-GA---AA-ACA-C-TTGAGTG---TG-TATAC-ACTATCT
gi|73484 : TTG--AACTTCAA-TGA------CTT-GTTAATG--T-AAA-GG-CACCATA-TG-GTA-TAAAC-AT--A---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73485 : TTG--AACTTCAA-TGA------CTT-GTTA-TG--T-AAA-GG-CACCATA-TG-TTA-TAAAC-AT-GA---GA-ACACC-TTGA-TG---TGTTATA--ACTATCT
gi|73486 : TTT--AACTTCAACTGA-AAAATTTT-GTCA-TG--T-AAA-AG-CACCGTA-T--GAA-CAAAC-AT-GATGCAA-ACACCTTTGAGTG---TG-TATAACACTATC
gi|73487 : TT--AACTTCAA-TGA-A---C-TT-GTTA-TG----AAA-GGCCAACATA-TC-TAT-TAAACAAT-GA---GAGACACC-TTGAGTG---
gi|73488 : TT--AAACTCAA-TGA-A---CTTTTGTTA-TG--T-AAA-GA-CACCATA-TA-GTA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACAATCT
gi|73489 : TT--AACTT-AA-TGA-A---ATTTCGTTA-TG--T-AAA-GG-CATCGTA-TG-AAA-TAAAC-AT-GAT--AA-ACACC-CTGAGTG---TG-TATA--ACAAT
gi|73490 : TT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-TAA-GC-CAC---A-TG-TT--TAAAC-AT-GA---GA-AC--C-TTGAGTG---TG-TATA--ACTATCT
gi|73491 : TT--AACTTCAA-TGA-A---TTTTTGTCA-TG--T-AAA-GG-CACCTTA-TG-GGA-TAAAC-AT-GA---
gi|73492 : --AACTTCAA-TGA-A---ATTTCGCCA-TG--T-AAA-GA-CATCATA-TG-GGA-CAA-C-AT-GAT--AA-ACACC-TTGAGTG---TGATATA--ACAAT
gi|73493 : TT-GTCA-TG--T-AAA-GG-CGTTGTA-TG-GGA--AAAT-AT-GAT--AA-ACACC-TCGAGTG---TA-TATG--AC
Alignments
lowQualScore : 1111 11 111
lowQualScore : 22 3 1 0000 22 1 22 1 3 1 4 1 1 1 1 1 1 000 5 1 222 5 44 0
lowQualScore : .. . . .... .. . .. . . . . . . . . . . ... . . ... . .. .
lowQualScore : 33 3 7 2222 11 6 22 6 2 6 6 6 6 6 6 6 6 888 0 7 999 2 11 6
consensus : ATTT--AACTTCAA-TGA-A---CTTT-GTTA-TG--T-AAA-GG-CACCGTA-TG-GNA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
Reference ( family-715 ) : ATTT--AACTTCAA-TGA-A---CTTT-GTTA-TG--T-AAA-GG-CACCGTA-TG-GNA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73469 : ATTT--AACTTCAA-TGA-A---ATT--GTTA-TG--T-AAA-GG-CACCATG-TG-GTA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73470 : ATTTTAAACTTCAA-TGA-A---ATTT-GTTA-TG--T-AAACGG-CACCATG-TG-GTATTTAAC-ATAGA---GA-ACACC-TTGAGTGTGTTG-TATA--ACTAGCT
gi|73471 : ATTT--AACTTCAA-TGA-A---CTTT--TTA-TG--T-AAA-GG-CACCATA-TG-GTA-TAAAC-AT-GA---AA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73472 : ATTT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-AAA-GG-CACGATA-TG-GTG-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--AC
gi|73473 : ATTT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-AAA-GG-CACCATA-TG-ATA-TAAAC-AT-GA---GA-ACACC-TTGA--G---TG-CATA--ACTATCT
gi|73474 : ATTT--AACTTCAA-TGA-A---CTA--GTTA-TG--T-AAA-AG-CACCATG-TG-GTA-TAAAC-AT-GA---GA-ATGCC-TTGAGTC---TG-TATA--ACTATCT
gi|73475 : ATTT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-TTA-G----CC-CA-TG-GTT-TAAAC-AT-GA---GA--CACC-TTGAGTG---TG-TATA--ACTATCT
gi|73476 : ATTT--AACTTCAT-CGAGA---TTTT-GTTA-TG--T-AAA-GG-CACCATA-TG-GGA-TCATT-AC-GAT--AA-ACACC-TTGAGTG---TG-TATA--ACAAT
gi|73477 : ATTT--AACTTCAA-TGA-AA--TTTT-GTTA-TG--T-AAA-GG-CACCATG-TG-GGA-TA-------------A-ACACC-ATGAGTG---TG-TATA--ACAAT
gi|73478 : ATTT--AACTTCAA-TGA-AA--TTTT-GTCA-TGGTTGAAA-GG-CATTGTA-TG-GGA-TAAGC-AT-GA---TACACACC-TTGAGTG---TG-TATA--
gi|73479 : ATTT--AACTTCAA-TGA-AA--TTTT-GTCA-TG--T-AAA-GG-CATCGTA-TG-GGA-TA-------------A-ACACC-TTAGGTG---TG-TATA--
gi|73480 : ATTT--GACTTCAA--------------------A--T-AAATGG-CAACATA-TG-GAA-TAAAC-AT-GAT--AA-ACACC-TTGAGTG---TG-TATA--ACAAT
gi|73481 : ATTT--AACTTCAA-TGA-A---CTT--GTTA---------------------------A-TATAC-AT-GA---GA-ACACC-TTGAGTG---GG-TATA--ACTATCT
gi|73482 : ATTT--AACTTCAA-TGA-A---ATTT-GTCA-TG--C-AAA-GG-CATCGTA-AGAGAA-TAAAC-A---A---GATACACA-TGGA-TG---TGTTATA--ACAAT
gi|73483 : TTC--AACTTCAAATGA-A---CTTT-TTTA-TG--T-AAA-GG---CCATATTG-GTA-TAAAC-AT-GA---AA-ACA-C-TTGAGTG---TG-TATAC-ACTATCT
gi|73484 : TTG--AACTTCAA-TGA------CTT-GTTAATG--T-AAA-GG-CACCATA-TG-GTA-TAAAC-AT--A---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73485 : TTG--AACTTCAA-TGA------CTT-GTTA-TG--T-AAA-GG-CACCATA-TG-TTA-TAAAC-AT-GA---GA-ACACC-TTGA-TG---TGTTATA--ACTATCT
gi|73486 : TTT--AACTTCAACTGA-AAAATTTT-GTCA-TG--T-AAA-AG-CACCGTA-T--GAA-CAAAC-AT-GATGCAA-ACACCTTTGAGTG---TG-TATAACACTATC
gi|73487 : TT--AACTTCAA-TGA-A---C-TT-GTTA-TG----AAA-GGCCAACATA-TC-TAT-TAAACAAT-GA---GAGACACC-TTGAGTG---
gi|73488 : TT--AAACTCAA-TGA-A---CTTTTGTTA-TG--T-AAA-GA-CACCATA-TA-GTA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACAATCT
gi|73489 : TT--AACTT-AA-TGA-A---ATTTCGTTA-TG--T-AAA-GG-CATCGTA-TG-AAA-TAAAC-AT-GAT--AA-ACACC-CTGAGTG---TG-TATA--ACAAT
gi|73490 : TT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-TAA-GC-CAC---A-TG-TT--TAAAC-AT-GA---GA-AC--C-TTGAGTG---TG-TATA--ACTATCT
gi|73491 : TT--AACTTCAA-TGA-A---TTTTTGTCA-TG--T-AAA-GG-CACCTTA-TG-GGA-TAAAC-AT-GA---
gi|73492 : --AACTTCAA-TGA-A---ATTTCGCCA-TG--T-AAA-GA-CATCATA-TG-GGA-CAA-C-AT-GAT--AA-ACACC-TTGAGTG---TGATATA--ACAAT
gi|73493 : TT-GTCA-TG--T-AAA-GG-CGTTGTA-TG-GGA--AAAT-AT-GAT--AA-ACACC-TCGAGTG---TA-TATG--AC
blockSeqs : TA A G AAAT TT A GT G C C A T A T T A A TGC C T TGT T AC
blockSeqs : . C . AT TC . . . T . A . . T . . . T T . . T C
blockSeqs : . . . AT TT . . . . . A . . T . . . T G . . A .
blockSeqs : . . . AT TC . . . . . A . . T . . . T . . . . .
blockSeqs : . . . A T . . . . . A . . T . . . T . . . . .
blockSeqs : . . . C T . . . . . A . . T . . . T . . . . .
blockSeqs : . . . C T . . . . . A . . G . . . . . . . . .
blockSeqs : . . . C T . . . . . G . . G . . . . . . . . .
blockSeqs : . . . C T . . . . . G . . G . . . . . . . . .
blockSeqs : . . . C T . . . . . A . . G . . . . . . . . .
blockSeqs : . . . T T . . . . . G . . A . . . . . . . . .
blockSeqs : . . . C T . . . . . A . . A . . . . . . . . .
blockSeqs : . . . A T . . . . . A . . T . . . . . . . . .
blockSeqs : . . . C T . . . . . A . . T . . . . . . . . .
blockSeqs : . . . C T . . . . . G . . T . . . . . . . . .
blockSeqs : . . . C T . . . . . A . . A . . . . . . . . .
blockSeqs : . . . A T . . . . . A . . A . . . . . . . . .
blockSeqs : . . . C . . . . . . G . . T . . . . . . . . .
blockSeqs : . . . T . . . . . . T . . A . . . . . . . . .
blockSeqs : . . . A . . . . . . A . . T . . . . . . . . .
blockSeqs : . . . . . . . . . . G . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . G . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . G . . . . . . .
blockSeqs : . . . . . . . . . . . . . .
blockSeqCons : T*
originalCons : ATTT--AACTTCAA-TGA-A---CTTT-GTTA-TG--T-AAA-GG-CACCGTA-TG-GNA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
finalCons : ATTT--AACTTCAA-TGA-A---CTTT-GTTA-TG--T-AAA-GG-CACCGTA-TG-GNA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
Alignments
lowQualScore : 1111 11 111
lowQualScore : 22 3 1 0000 22 1 22 1 3 1 4 1 1 1 1 1 1 000 5 1 222 5 44 0
lowQualScore : .. . . .... .. . .. . . . . . . . . . . ... . . ... . .. .
lowQualScore : 33 3 7 2222 11 6 22 6 2 6 6 6 6 6 6 6 6 888 0 7 999 2 11 6
consensus : ATTT--AACTTCAA-TGA-A---CTTT-GTTA-TG--T-AAA-GG-CACCGTA-TG-GNA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
Reference ( family-715 ) : ATTT--AACTTCAA-TGA-A---CTTT-GTTA-TG--T-AAA-GG-CACCGTA-TG-GNA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73469 : ATTT--AACTTCAA-TGA-A---ATT--GTTA-TG--T-AAA-GG-CACCATG-TG-GTA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73470 : ATTTTAAACTTCAA-TGA-A---ATTT-GTTA-TG--T-AAACGG-CACCATG-TG-GTATTTAAC-ATAGA---GA-ACACC-TTGAGTGTGTTG-TATA--ACTAGCT
gi|73471 : ATTT--AACTTCAA-TGA-A---CTTT--TTA-TG--T-AAA-GG-CACCATA-TG-GTA-TAAAC-AT-GA---AA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73472 : ATTT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-AAA-GG-CACGATA-TG-GTG-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--AC
gi|73473 : ATTT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-AAA-GG-CACCATA-TG-ATA-TAAAC-AT-GA---GA-ACACC-TTGA--G---TG-CATA--ACTATCT
gi|73474 : ATTT--AACTTCAA-TGA-A---CTA--GTTA-TG--T-AAA-AG-CACCATG-TG-GTA-TAAAC-AT-GA---GA-ATGCC-TTGAGTC---TG-TATA--ACTATCT
gi|73475 : ATTT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-TTA-G----CC-CA-TG-GTT-TAAAC-AT-GA---GA--CACC-TTGAGTG---TG-TATA--ACTATCT
gi|73476 : ATTT--AACTTCAT-CGAGA---TTTT-GTTA-TG--T-AAA-GG-CACCATA-TG-GGA-TCATT-AC-GAT--AA-ACACC-TTGAGTG---TG-TATA--ACAAT
gi|73477 : ATTT--AACTTCAA-TGA-AA--TTTT-GTTA-TG--T-AAA-GG-CACCATG-TG-GGA-TA-------------A-ACACC-ATGAGTG---TG-TATA--ACAAT
gi|73478 : ATTT--AACTTCAA-TGA-AA--TTTT-GTCA-TGGTTGAAA-GG-CATTGTA-TG-GGA-TAAGC-AT-GA---TACACACC-TTGAGTG---TG-TATA--
gi|73479 : ATTT--AACTTCAA-TGA-AA--TTTT-GTCA-TG--T-AAA-GG-CATCGTA-TG-GGA-TA-------------A-ACACC-TTAGGTG---TG-TATA--
gi|73480 : ATTT--GACTTCAA--------------------A--T-AAATGG-CAACATA-TG-GAA-TAAAC-AT-GAT--AA-ACACC-TTGAGTG---TG-TATA--ACAAT
gi|73481 : ATTT--AACTTCAA-TGA-A---CTT--GTTA---------------------------A-TATAC-AT-GA---GA-ACACC-TTGAGTG---GG-TATA--ACTATCT
gi|73482 : ATTT--AACTTCAA-TGA-A---ATTT-GTCA-TG--C-AAA-GG-CATCGTA-AGAGAA-TAAAC-A---A---GATACACA-TGGA-TG---TGTTATA--ACAAT
gi|73483 : TTC--AACTTCAAATGA-A---CTTT-TTTA-TG--T-AAA-GG---CCATATTG-GTA-TAAAC-AT-GA---AA-ACA-C-TTGAGTG---TG-TATAC-ACTATCT
gi|73484 : TTG--AACTTCAA-TGA------CTT-GTTAATG--T-AAA-GG-CACCATA-TG-GTA-TAAAC-AT--A---GA-ACACC-TTGAGTG---TG-TATA--ACTATCT
gi|73485 : TTG--AACTTCAA-TGA------CTT-GTTA-TG--T-AAA-GG-CACCATA-TG-TTA-TAAAC-AT-GA---GA-ACACC-TTGA-TG---TGTTATA--ACTATCT
gi|73486 : TTT--AACTTCAACTGA-AAAATTTT-GTCA-TG--T-AAA-AG-CACCGTA-T--GAA-CAAAC-AT-GATGCAA-ACACCTTTGAGTG---TG-TATAACACTATC
gi|73487 : TT--AACTTCAA-TGA-A---C-TT-GTTA-TG----AAA-GGCCAACATA-TC-TAT-TAAACAAT-GA---GAGACACC-TTGAGTG---
gi|73488 : TT--AAACTCAA-TGA-A---CTTTTGTTA-TG--T-AAA-GA-CACCATA-TA-GTA-TAAAC-AT-GA---GA-ACACC-TTGAGTG---TG-TATA--ACAATCT
gi|73489 : TT--AACTT-AA-TGA-A---ATTTCGTTA-TG--T-AAA-GG-CATCGTA-TG-AAA-TAAAC-AT-GAT--AA-ACACC-CTGAGTG---TG-TATA--ACAAT
gi|73490 : TT--AACTTCAA-TGA-A---CTT--GTTA-TG--T-TAA-GC-CAC---A-TG-TT--TAAAC-AT-GA---GA-AC--C-TTGAGTG---TG-TATA--ACTATCT
gi|73491 : TT--AACTTCAA-TGA-A---TTTTTGTCA-TG--T-AAA-GG-CACCTTA-TG-GGA-TAAAC-AT-GA---
gi|73492 : --AACTTCAA-TGA-A---ATTTCGCCA-TG--T-AAA-GA-CATCATA-TG-GGA-CAA-C-AT-GAT--AA-ACACC-TTGAGTG---TGATATA--ACAAT
gi|73493 : TT-GTCA-TG--T-AAA-GG-CGTTGTA-TG-GGA--AAAT-AT-GAT--AA-ACACC-TCGAGTG---TA-TATG--AC