lowQualScore : 1
lowQualScore : 5 00 0 00 0 888 0 5 00 0 0000
lowQualScore : . .. . .. . ... . . .. . ....
lowQualScore : 5 66 4 66 4 666 4 1 66 4 9999
consensus : TATAAAGAACGG--CCTA-ACAAT--T-G-NTATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
Reference ( gi|54291 ) : TATAACGAACGG--CTTA-ACAAT--T-G-CCATGAAA-CATGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|54250 : TATAAAGAACGG--CTTA-ACAAT--T-G-CCATGAAA-CACGCCAGA--CAGCA-TT----TGACTCAATGGTAGGTTGT
gi|53993 : gTATAATGAATGG--CTTA-ACAAT--T-G-CTATGAAA-CATGTCAGA--CAGCA-TT----TTACCCAATGGCAGG
gi|53921 : tgTATAAAGAACGG--TTTA-ATAAT--T-G-CTACGAAA-CACGTCAGA--CAGCA-TT----TGACCCACTGGCAGGTTGTA
gi|53976 : tgTATAAAGAACGC--TTTA-ACAAT--TTG-CCATGAAA-CGCGTCAGA--CAGCG-TT----TGACCCAATGGCAGGTTGTA
gi|53906 : tgTATGAAGAACGG--CCAA-ACAAT--T-G-ATATGAAA-CATGTCAGA--CAGCA-TT----TGGCCCAATGGCAGGTTGTA
gi|53980 : tgTGTAAAGAACGG--CTTA-ACAAT--T-G-CCAAGAAAACACATCAGA--CAGCA-TT----TGACCCAATGGTAGGTTGTA
gi|53982 : tgTATAAAGAACGG--GTTA-ATAAT--T-A-CTTTGAAA-CATGTCAGG--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53930 : tgTATAAAGAACTG--CATA-ACAAT--T-G-CGATGAAA-CACGTCAGA--CAGCA-TT----TGACCCTATGGCAGGTTGTA
gi|54249 : tgTATAAAGAATGG--CGTA-ACAGT--T-G-CTATGAAA-CATGTCAGA--CAGCA-TT----TGCCCCGATGACAGGTTGTA
gi|54292 : gTATAAAGAACGG--CCTA-ACAAT--T-G-ATATGAAA-CATGCCAGT--TAGCA-TT----TGACCCGATGGCAGGTTGTA
gi|54294 : TATAAAGAACAG--GTTA-ACAAT--A-G-CTATGAAA-CACGTCAGA--CGGCA-TT----TAACCCAATGGCAGGTTGTA
gi|53944 : TATTAAGAACGG--CTTA--CAAT--T-G-CTATGATA-CACGTCAGA--CAGCA-TT----TAACCCAATGGCAGGTTGTA
gi|53918 : tgTATAAAGAAAGG--CTTA-ACAAT--T-G-CTATGATA-CAGGTCAGA--CAGCA-TT----TGACCAAATGGCGGGTTGTA
gi|53945 : tgTATGAAAAACGG--CTTA-ACAAT--T-G-CTATAAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGCAGGT
gi|53908 : tgTATAAAGAACGG--CCTA-ACAAC--C-G-TTATGAAA-CACGTTAGA--CAGCA-TT----TGACCCATTGGCAGGTTGTA
gi|53958 : tgTATAAAGAACGG--CTTA-ACAAT--C-G-CTATGAAA-CACATCAGA--CAGCA-TT----TTAACCAATGGAAGGTTGTA
gi|53964 : tgTATACAGAACGG--CTTA-ATAAT--T-G-CTATGAAA-CACGACAGA--CAGCA-TT----TGACCCAATGGCATATTGTA
gi|53926 : tgTATGAAAAACGG--CTTA-ACAAT--T-G-CTATGAAG-CACATCAGA--CAGCA-TT----TGACCCAATGACAGGTCATA
gi|54029 : tgTATGAAAAACGG--CTTA-ACAAT--T-G-CTATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGTAGG
gi|53974 : taTATAAAGAACGG--CTTA-ACAAT--T-G-CTACGAAA-CACGTCAGA--CAGCA-TT----TTACCCAACGGCACGCTATA
gi|53900 : tgTATAAAGAATGC--CCTA-ACAAT--T-G-GTGTGAAA-CACGTCAGA--CAACA-TT----TGACCCAATGGCAGGTTGTA
gi|53929 : tgTGTAAAGAATGG--CTTA-ACAAT--T-C-TTATGAAA-CACGTCAGA--TAGCA-TT----TCACCCAATGGCAGGTTGTA
gi|53973 : tgTATAAAGAAGGG--CTTA-ACAAT--T-G-CCATGAAA-CACGTC-GA--CAGCA-TT----TTACCCAATGGCAGG
gi|53943 : tgTATAAAGAACTG--CATA-ACAAT--T-G-CTATGAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGGCAGG
gi|53999 : tgTATTAAGAATGG--CTTA-ACAAT--T-G-CTATGAAA-CAGGTCAGA--CATCA-TT----TAACCCAATGGAAGGTTGTA
gi|53966 : tgTATGAAAAACAG--CTTA-ACAAT--T-G-CTATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGAAGGTCATA
gi|53988 : tgTATAA-AAATGG--CTTA-ACAAT--T-G-CTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGTAGGTCATA
gi|53939 : tgTATAAAAAACGG--CTTA-ACAAT--T-G-CTATGAAA-CGCATCAGA--CAGCA-TT----TGACCCAATGACAG
gi|54246 : tgTATAAAGAACAC--CGTA-ACAAT--T-G-GTATGAAA-CACGTCAGA--CAGCA-TT----TGATCCAATAGCAGGTTGTA
gi|54253 : gTATAAAGAACGG--CCTA-ACAAC--T-G-CTATGAAA-CACATCGGA--CAGCA-TT----TAACCCAATGGCAGG
gi|54007 : gTATAAAGAACGG--CTAA-TCAAT--T-G-CTATGAAA-CTCGTCAGA--CAGCA-TG----TGACCGAATGGCAGGTTGTA
gi|54255 : tgTATAAAGAACGG--CTTA-ACAAT--T-G-CTATGACG-TACATCAGA--CAGCA-TT----TGACCAAGTGACAGGTTGTA
gi|54259 : gTATGAAAAACGG--CTTC-GCAAT--T-G-CTATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGACAGGCCGTA
gi|54261 : gTATGAAAAACAG--CTTA-ACAAT--T-G-CTATGAAA-CACATCAGA--CAACA-TT----TGACCTAATGACAGGCCGTA
gi|53909 : gTATAA-AAACGG--CTTA-AGAAT--T-G-CTATGAAA-CACATCAGA--CATCA-TT----TGACCCAATGACAAGTTATA
gi|53978 : tgTATAAAGAACGG--CTTA-ACGAT--T-G-CTATGGAA-CACCTCAAA--CAGCA-TTTAACTAACCCAATGACAGGTTGTA
gi|53942 : tgTATAAAGAACGG--CCTA-ACAAT--T-G-GTATGAAA-CATGTTATG--CAGCA-TT----TTACTCAATGGCAGTTTGTA
gi|53995 : tgTATGAAAACCGG--TTTA-ACAAT--T-G-CTATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATAACAGGCCGTA
gi|54001 : tgTATGAAAAACGG--CCTA-ATAAT--T-G-CTATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGAAAGTCATA
gi|53998 : tgTGTAAAAAACGG--CTTA-ACAAT--G-G-CTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGATAGGTCATA
gi|53996 : tgTATAAAGAACGG--CTTA-ACAAT--T-G-CTATGGAA-CACGTCA-----AACA-TT----TGACCCAAGGACAGGCTGTA
gi|54290 : tgTATAAAGAACAG--CCTA-ACATT--T-G-GTATGAAG-CACGGCAGA--CAGCA-TT----TGACCCAATGACGGGTTGTA
gi|53950 : TATAAAGAACAG--CTTA-ACAAT--T-G-GTTTCAAA-CACGTCAGA--GAGCA-TT----TGACCCAATGGCA-GTTGTA
gi|54296 : tgTATAGAGAATGG--CTTA-ACAGT--T-G-GTATGAAA-CACGTCAGA--CAGCA-TT----TTATCCAATGGCAGG
gi|53990 : TATAAAGAGTGG--CTTA-ACGAT--T-G-CTATGAAA-CACGACAGA--CAGCA-TT----TTACCCAATGACAGG
gi|53979 : tgTATGAAGAACGG--CCTA-ACAAT--T-G-GTATGACA-CATGTCAGA--CAACA-TT----TGACCAAATGGTATATTGTA
gi|54026 : tgTATAAAGAACGG--CTTA-ACAAT--T-G-GCATGAAA-CTCGTCAGA--CAGCA-TT----TTACC------CAGGTTGTA
gi|53907 : tgTATAAAGAACGG--TCTA-ATAAT--T-G-GTATGAAA-CACGTCAGA--CA-----T----TGACCCAATGACAGGTTGTA
gi|54022 : tgTATAA-AAACAG--CCCA-ACATT--T-A-GTATAAAA-CATGTCAGA--CAGCA-AT----TGACCCAATGGCAGGTTGTA
gi|53992 : tgTACAAAGAACGG--CTTA--CAAT--T-G-GTATGAGA-CACGTCAGA--CAGTA-TT----TGAACCAATGGAAGGTTGCA
gi|53962 : tgTATAAAGAATGG--CCTA-ACAAT--T-G-GAACGAAA-CACGTCAGA--CAGCA-AT----TGACCAAATGGCAGGT
gi|54251 : taTATAAAGAAGGG--CCTA-ACAAC--T-G-GTATGAAA-CA-----GA--CAGCA-TT----TGACCCGATGGCAGGTTGTA
gi|53984 : gTATAAAGA-------TTA-ACAAT--T-G-CTATGAAA-CACGCGAGA--CAGCA-TT----TGACCCAATGACAGATTGT
gi|54011 : tgTATAAAAAA-GG--CTTA-ACAAT--T-G-TTGTGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGTAGG
gi|53903 : tgTATAAAGAAATG--TCTA-ACAAT--T-G-GTATGAAA-TACGTCAGA--CAGCA-TT----TAACTCAATGACAGGTTATA
gi|53924 : tgTAGAAAGATCGG--CCTA-ACAAT--T-G-GTATGAAA-CACGTCTGA--CAGCA-TT----TGACCCAACGATAGCTTGTA
gi|54020 : tgTATTAAGAATGG--CCTT-GCAAT--T-G-GTATGAAA-CATGTCAGAATCAGCA-TT----TGACGCAAAGGCAGGTTGTA
gi|53994 : tgTATGAAAAAAAG--CTTA-ACAAT--T-G-CTAGGAAA-CACATCAGA--CAGC--TT----TGACCCAATAACAGATTGT
gi|53938 : tgTATAAAGAACGG--TCTA-A-AAT--T-G-GTATGAAA-CACGTCAGA--CAGCA-TT----TTAAACAATGACAGGTTG
gi|53937 : tgTATAAAGAAAGG--CCTC-ATAAT--T-G-GTATGAAA-CACGCTAGA--GATCA-TT----CGACCCAATGGCAGGTTGTA
gi|54010 : taTATGAAAAAAGG--CTTA-ATAAT--T-G-CTATGAAA-CACATCAAA--CAACA--T----TGACCCAATGACAGGTCATA
gi|53928 : tgTATAAAGAATGG--CCTA-GCAAT--T-C-GTATGAAA-CACGCCAAA--CAGCA-TT----TGACCTCATGACAGGTTTTA
gi|54009 : tgTATAAAGAACGG--CCTA-ACAAT--A-G-GTATAAAA-TACGTCAGA--CAGCA-TT----TGACTCAATG
gi|54005 : taTATAAAGAATAG--CCTA-ACAAT--T-T-GTATGAAA-CACACTAGG--CAGCA-GT----TGACTCAATGGCAGGTTATAa
gi|53955 : tgTGTAAAAAGCAG--CCTT-ACAAT--T-G-GTATAAAA-CACGTCAGA--TAGCA-TT----TCACCCAATGATAGGTTGTA
gi|54265 : tgTATAAAGGAGAG--TCTA-ACAAT--T-A-GTAAGAAA-CACGTCAGA--CAGCA-TT----TGACCCACTGGCACGTT
gi|53940 : gATAACGTACGG--CTTA-ACAAT--T-G-GTATGAAA-CACGTCAGA--CAGCA-TT----TGGCCCATTGGCAGGTTGTA
gi|53916 : tgaATAAAGAATGG--CTTA-ACAGT--T-G-TTGTGAAA-CACGTTAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53923 : tgcATAAAGAACGGATCCTA-ACAAT--T-G-CTGTGAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGGCAGATTGTA
gi|54263 : tgcATAAAGAACGG--CTTA-ACAAT--T-G-CTATGAAA-CACGTCAGA--CAGCATTT----TGACCCAATGGCA
gi|53904 : gcATAAAGAGCGG--CTTA-ATAAT--T-G-GTATGAAA-CACGTTAGA--CAGCA-TT----TAACCCAATGACAGGTTGTA
gi|53902 : tgcATAAAGTACGG--CCTG-ACAAT--T-C-GTATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53915 : tgcATAAAGAATGG--CCTA-ACAAT--T-A-GCATGAAG-CGCGTCAGA--CAGCA-TT----TGGCCCAATGACAAGTTGTA
gi|53912 : tggATAAAGAACGG--CCTA-ACAAT--A-G-GTATGTAG-CACGCCAGA--CAGCA-TT----TGACTCAATGACAGGTTGTA
gi|53972 : tgcACAAAGAACGG--CATA-ACAAT--T-G-GTATGAAA-CACATCAGA--CAACA-TC----TGACTCAACGGTAGGTTGTA
gi|54017 : tgcATGAAGAACGA--TCTA-ACAAC--T-G-GTATGAAA-CACGCTAGA--CAGCA--T----TGACCCATTGACAGGTTGTA
gi|54315 : tgaTAAAGAACGG--CCTA-ATAAT--T-G-ACATAAAA-CA-ATCAGA--CAGCA-TT----TGACCCATTGACAGGTTGTA
gi|53919 : TAAAGAACGG--CCTA-ACAAT--T-G-GTATGAAG-CACGTCAGA--CAGCA-TT----CGACCTAATGATACGTTGT
gi|54312 : tgcgTAAAGAACGG--CCTA-ACAAG--T-G-GTAGGAAA-CACGTCAGA--CATCA-TT----AGACCCAATGACAGGTTGTA
gi|54317 : TAAAGAACGG--CCTA-ACAAT--T-G-GTATGAAA-CATGTCAGA--CAACA-AT----TAACACGGTGACAAGTTGTA
gi|53941 : AAAGAACGG--ACTA-ACAAT--G-G-GTGTGAAA-CACGTCAGA--CAACA-TT----TGACCCAATGTCAAGTTGTA
gi|54325 : tgtgcAAAGAACAC--CCTA-ACAATATT-G-GTATAAAA-CACGTCAGA--CAGCA-TT----CGACCCAATGACAGGTTGT
gi|54308 : GAACGG--CCTAGACA-T--T-G-GTATGAAA-CATGTCAGA--CGGCA-TT----GGACCCAATGGCAGGTTGTA
gi|53986 : atacaGAAAGG--TGTA-ACAAT--A-G-ATATGAAG-CACATCGGA--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|54336 : tgaattagGAACGG--CCTA-ACAAT--G-G-T-ATGGAA-CACGTCCGA--CAGCA-TT----TGAGCAAATGACAGGTTGTA
gi|53946 : aaAACGG--CTTA-ACAAT--T-G-CTAAGAAA-CACGTCAGA--CAGCA-CT----TGACCCAATGGCAGATTGTA
gi|54264 : tgtatggaaAACGG--CTCA-ACAAT--T-G-CTATGAAA-CATGTCAGA--CAGCA-TC----TGACCCGATGACAGATTGTA
gi|53965 : gtatgaaAACGG--CTTA-ACAAT--T-G-CTATGAAA-CACATCAGA--CAGCA-TT----TGGCCCAATGGCAGGTCATA
gi|53997 : tgtgtgaaaAACGG--CTTA-ACAAT--G-G-CTATGAAA-TACGTCAGC--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|54025 : tgcgtgaatAACGG--CCTA-ACAAT--G-G-TTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54024 : tgtgtgaatAACGG--CCTA-ACAAT--G-G-TTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54023 : tgtgtgaatAACGG--CCTA-ACAAT--G-G-TTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|53977 : tgtgtgaatAACGG--CCTA-ACAAT--G-G-TTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGACAGGTCATA
gi|53951 : tgtgtgaatAACGG--CCTA-ACAAT--G-G-TTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGACAGGTCATA
gi|54262 : tgtgtgaaaAACGG--CTTA-ACAAT--T-GGTTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGATAGGTCATA
gi|54002 : gtgtgaaaAACGG--CCTA-ACAAT--G-G-TTATGAAA-CACATCAGA--CAACA-TT----TGACTCAATGATAGGTTATA
gi|53949 : tgtgtgaaaAACAA--CCCA-ATAAT--T-G-GTATTAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGACAGGTTGT
gi|54353 : tgcataTA-ACAAT--T-G-GTATAAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|54368 : gtc-ACGAT--T-G-GTATGAAA-CACGTCAGA--CAGCA-TT----TTACCCAATGACAGGTTGTA
Alignments
lowQualScore : 00 0 0 00 0 1 0 0 00 0 0000
lowQualScore : .. . . .. . . . . .. . ....
lowQualScore : 66 4 4 66 4 0 4 4 55 4 8888
consensus : TATAAAGAACGG--CCTA-A-CAAT--T-GNT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
Reference ( family-71 ) : TATAAAGAACGG--CCTA-A-CAAT--T-GNT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53900 : TATAAAGAATGC--CCTA-A-CAAT--T-GGT-GTGAAA-CACGTCAGA--CAACA-TT----TGACCCAATGGCAGGTTGTA
gi|53902 : tgATAAAGTACGG--CCTG-A-CAAT--T-CGT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53903 : tgcTATAAAGAAATG--TCTA-A-CAAT--T-GGT-ATGAAA-TACGTCAGA--CAGCA-TT----TAACTCAATGACAGGTTATA
gi|53904 : tgATAAAGAGCGG--CTTA-A-TAAT--T-GGT-ATGAAA-CACGTTAGA--CAGCA-TT----TAACCCAATGACAGGTTGTA
gi|53906 : tgcTATGAAGAACGG--CCAA-A-CAAT--T-GAT-ATGAAA-CATGTCAGA--CAGCA-TT----TGGCCCAATGGCAGGTTGTA
gi|53907 : tgTATAAAGAACGG--TCTA-A-TAAT--T-GGT-ATGAAA-CACGTCAGA--CA-----T----TGACCCAATGACAGGTTGTA
gi|53908 : tgTATAAAGAACGG--CCTA-A-CAAC--C-GTT-ATGAAA-CACGTTAGA--CAGCA-TT----TGACCCATTGGCAGGTTGTA
gi|53909 : tgTATAAA-AACGG--CTTA-A-GAAT--T-GCT-ATGAAA-CACATCAGA--CATCA-TT----TGACCCAATGACAAGTTATA
gi|53912 : tgATAAAGAACGG--CCTA-A-CAAT--A-GGT-ATGTAG-CACGCCAGA--CAGCA-TT----TGACTCAATGACAGGTTGTA
gi|53915 : tgcATAAAGAATGG--CCTA-A-CAAT--T-AGC-ATGAAG-CGCGTCAGA--CAGCA-TT----TGGCCCAATGACAAGTTGTA
gi|53916 : tggATAAAGAATGG--CTTA-A-CAGT--T-GTT-GTGAAA-CACGTTAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53918 : tgcTATAAAGAAAGG--CTTA-A-CAAT--T-GCT-ATGATA-CAGGTCAGA--CAGCA-TT----TGACCAAATGGCGGGTTGTA
gi|53919 : tgTAAAGAACGG--CCTA-A-CAAT--T-GGT-ATGAAG-CACGTCAGA--CAGCA-TT----CGACCTAATGATACGTTGT
gi|53921 : tgcgTATAAAGAACGG--TTTA-A-TAAT--T-GCT-ACGAAA-CACGTCAGA--CAGCA-TT----TGACCCACTGGCAGGTTGTA
gi|53923 : tgATAAAGAACGGATCCTA-A-CAAT--T-GCT-GTGAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGGCAGATTGTA
gi|53924 : tgcTAGAAAGATCGG--CCTA-A-CAAT--T-GGT-ATGAAA-CACGTCTGA--CAGCA-TT----TGACCCAACGATAGCTTGTA
gi|53926 : tgTATGAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAG-CACATCAGA--CAGCA-TT----TGACCCAATGACAGGTCATA
gi|53928 : tgTATAAAGAATGG--CCTA-G-CAAT--T-CGT-ATGAAA-CACGCCAAA--CAGCA-TT----TGACCTCATGACAGGTTTTA
gi|53929 : tgTGTAAAGAATGG--CTTA-A-CAAT--T-CTT-ATGAAA-CACGTCAGA--TAGCA-TT----TCACCCAATGGCAGGTTGTA
gi|53930 : tgTATAAAGAACTG--CATA-A-CAAT--T-GCG-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCTATGGCAGGTTGTA
gi|53937 : tgTATAAAGAAAGG--CCTC-A-TAAT--T-GGT-ATGAAA-CACGCTAGA--GATCA-TT----CGACCCAATGGCAGGTTGTA
gi|53938 : taTATAAAGAACGG--TCTA-A--AAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TTAAACAATGACAGGTTG
gi|53939 : tgTATAAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CGCATCAGA--CAGCA-TT----TGACCCAATGACAG
gi|53940 : tgATAACGTACGG--CTTA-A-CAAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TGGCCCATTGGCAGGTTGTA
gi|53941 : tgaAAAGAACGG--ACTA-A-CAAT--G-GGT-GTGAAA-CACGTCAGA--CAACA-TT----TGACCCAATGTCAAGTTGTA
gi|53942 : tgtgcTATAAAGAACGG--CCTA-A-CAAT--T-GGT-ATGAAA-CATGTTATG--CAGCA-TT----TTACTCAATGGCAGTTTGTA
gi|53943 : tgTATAAAGAACTG--CATA-A-CAAT--T-GCT-ATGAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGGCAGG
gi|53944 : tgTATTAAGAACGG--CTTA---CAAT--T-GCT-ATGATA-CACGTCAGA--CAGCA-TT----TAACCCAATGGCAGGTTGTA
gi|53945 : tgTATGAAAAACGG--CTTA-A-CAAT--T-GCT-ATAAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGCAGGT
gi|53946 : tgTATGGAAAACGG--CTTA-A-CAAT--T-GCT-AAGAAA-CACGTCAGA--CAGCA-CT----TGACCCAATGGCAGATTGTA
gi|53949 : tgAACAA--CCCA-A-TAAT--T-GGT-ATTAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGACAGGTTGT
gi|53950 : tgcataTATAAAGAACAG--CTTA-A-CAAT--T-GGT-TTCAAA-CACGTCAGA--GAGCA-TT----TGACCCAATGGCA-GTTGTA
gi|53951 : tgTGTGAAAAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGACAGGTCATA
gi|53955 : tgTGTAAAAAGCAG--CCTT-A-CAAT--T-GGT-ATAAAA-CACGTCAGA--TAGCA-TT----TCACCCAATGATAGGTTGTA
gi|53958 : tgTATAAAGAACGG--CTTA-A-CAAT--C-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TTAACCAATGGAAGGTTGTA
gi|53962 : tgTATAAAGAATGG--CCTA-A-CAAT--T-GGA-ACGAAA-CACGTCAGA--CAGCA-AT----TGACCAAATGGCAGGT
gi|53964 : taTATACAGAACGG--CTTA-A-TAAT--T-GCT-ATGAAA-CACGACAGA--CAGCA-TT----TGACCCAATGGCATATTGTA
gi|53965 : tgTGTGAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGGCCCAATGGCAGGTCATA
gi|53966 : tgTATGAAAAACAG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGAAGGTCATA
gi|53972 : tgACAAAGAACGG--CATA-A-CAAT--T-GGT-ATGAAA-CACATCAGA--CAACA-TC----TGACTCAACGGTAGGTTGTA
gi|53973 : tgcTATAAAGAAGGG--CTTA-A-CAAT--T-GCC-ATGAAA-CACGTC-GA--CAGCA-TT----TTACCCAATGGCAGG
gi|53974 : tgTATAAAGAACGG--CTTA-A-CAAT--T-GCT-ACGAAA-CACGTCAGA--CAGCA-TT----TTACCCAACGGCACGCTATA
gi|53976 : tgTATAAAGAACGC--TTTA-A-CAAT--TTGCC-ATGAAA-CGCGTCAGA--CAGCG-TT----TGACCCAATGGCAGGTTGTA
gi|53977 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGACAGGTCATA
gi|53978 : tgTATAAAGAACGG--CTTA-A-CGAT--T-GCT-ATGGAA-CACCTCAAA--CAGCA-TTTAACTAACCCAATGACAGGTTGTA
gi|53979 : tgTATGAAGAACGG--CCTA-A-CAAT--T-GGT-ATGACA-CATGTCAGA--CAACA-TT----TGACCAAATGGTATATTGTA
gi|53980 : tgTGTAAAGAACGG--CTTA-A-CAAT--T-GCC-AAGAAAACACATCAGA--CAGCA-TT----TGACCCAATGGTAGGTTGTA
gi|53982 : tgTATAAAGAACGG--GTTA-A-TAAT--T-ACT-TTGAAA-CATGTCAGG--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53984 : tgTATAAAGA-------TTA-A-CAAT--T-GCT-ATGAAA-CACGCGAGA--CAGCA-TT----TGACCCAATGACAGATTGT
gi|53986 : tgATTAGGAAAGG--TGTA-A-CAAT--A-GAT-ATGAAG-CACATCGGA--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53988 : tgaTATAAA-AATGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGTAGGTCATA
gi|53990 : tgTATAAAGAGTGG--CTTA-A-CGAT--T-GCT-ATGAAA-CACGACAGA--CAGCA-TT----TTACCCAATGACAGG
gi|53992 : tgTACAAAGAACGG--CTTA---CAAT--T-GGT-ATGAGA-CACGTCAGA--CAGTA-TT----TGAACCAATGGAAGGTTGCA
gi|53993 : tgTATAATGAATGG--CTTA-A-CAAT--T-GCT-ATGAAA-CATGTCAGA--CAGCA-TT----TTACCCAATGGCAGG
gi|53994 : tgTATGAAAAAAAG--CTTA-A-CAAT--T-GCT-AGGAAA-CACATCAGA--CAGC--TT----TGACCCAATAACAGATTGT
gi|53995 : tgTATGAAAACCGG--TTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATAACAGGCCGTA
gi|53996 : tgTATAAAGAACGG--CTTA-A-CAAT--T-GCT-ATGGAA-CACGTCA-----AACA-TT----TGACCCAAGGACAGGCTGTA
gi|53997 : tgTGAATAACGG--CTTA-A-CAAT--G-GCT-ATGAAA-TACGTCAGC--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53998 : tgcgTGTAAAAAACGG--CTTA-A-CAAT--G-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGATAGGTCATA
gi|53999 : tgTATTAAGAATGG--CTTA-A-CAAT--T-GCT-ATGAAA-CAGGTCAGA--CATCA-TT----TAACCCAATGGAAGGTTGTA
gi|54001 : tgTATGAAAAACGG--CCTA-A-TAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGAAAGTCATA
gi|54002 : tgTGTGAAAAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAACA-TT----TGACTCAATGATAGGTTATA
gi|54005 : tgTATAAAGAATAG--CCTA-A-CAAT--T-TGT-ATGAAA-CACACTAGG--CAGCA-GT----TGACTCAATGGCAGGTTATA
gi|54007 : tgTATAAAGAACGG---CTA-ATCAAT--T-GCT-ATGAAA-CTCGTCAGA--CAGCA-TG----TGACCGAATGGCAGGTTGTA
gi|54009 : tgTATAAAGAACGG--CCTA-A-CAAT--A-GGT-ATAAAA-TACGTCAGA--CAGCA-TT----TGACTCAATG
gi|54010 : taTATGAAAAAAGG--CTTA-A-TAAT--T-GCT-ATGAAA-CACATCAAA--CAACA--T----TGACCCAATGACAGGTCATAa
gi|54011 : tgTATAAAAAA-GG--CTTA-A-CAAT--T-GTT-GTGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGTAGG
gi|54017 : tgATGAAGAACGA--TCTA-A-CAAC--T-GGT-ATGAAA-CACGCTAGA--CAGCA--T----TGACCCATTGACAGGTTGTA
gi|54020 : tgaTATTAAGAATGG--CCTT-G-CAAT--T-GGT-ATGAAA-CATGTCAGAATCAGCA-TT----TGACGCAAAGGCAGGTTGTA
gi|54022 : tgTATAAA-AACAG--CCCA-A-CATT--T-AGT-ATAAAA-CATGTCAGA--CAGCA-AT----TGACCCAATGGCAGGTTGTA
gi|54023 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54024 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54025 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54026 : tgTATAAAGAACGG--CTTA-A-CAAT--T-GGC-ATGAAA-CTCGTCAGA--CAGCA-TT----TTACC------CAGGTTGTA
gi|54029 : tgTATGAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGTAGG
gi|54246 : taTATAAAGAACAC--CGTA-A-CAAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TGATCCAATAGCAGGTTGTA
gi|54249 : gTATAAAGAATGG--CGTA-A-CAGT--T-GCT-ATGAAA-CATGTCAGA--CAGCA-TT----TGCCCCGATGACAGGTTGTA
gi|54250 : gTATAAAGAACGG--CTTA-A-CAAT--T-GCC-ATGAAA-CACGCCAGA--CAGCA-TT----TGACTCAATGGTAGGTTGT
gi|54251 : gTATAAAGAAGGG--CCTA-A-CAAC--T-GGT-ATGAAA-CA-----GA--CAGCA-TT----TGACCCGATGGCAGGTTGTA
gi|54253 : gTATAAAGAACGG--CCTA-A-CAAC--T-GCT-ATGAAA-CACATCGGA--CAGCA-TT----TAACCCAATGGCAGG
gi|54255 : gTATAAAGAACGG--CTTA-A-CAAT--T-GCT-ATGACG-TACATCAGA--CAGCA-TT----TGACCAAGTGACAGGTTGTA
gi|54259 : gTATGAAAAACGG--CTTC-G-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGACAGGCCGTA
gi|54261 : gTATGAAAAACAG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAACA-TT----TGACCTAATGACAGGCCGTA
gi|54262 : gTGTGAAAAACGG--CTTA-A-CAAT--T-GGTTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGATAGGTCATA
gi|54263 : gATAAAGAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACGTCAGA--CAGCATTT----TGACCCAATGGCA
gi|54264 : gcTATGAA-AACGG--CTCA-A-CAAT--T-GCT-ATGAAA-CATGTCAGA--CAGCA-TC----TGACCCGATGACAGATTGTA
gi|54265 : gTATAAAGGAGAG--TCTA-A-CAAT--T-AGT-AAGAAA-CACGTCAGA--CAGCA-TT----TGACCCACTGGCACGTT
gi|54290 : gTATAAAGAACAG--CCTA-A-CATT--T-GGT-ATGAAG-CACGGCAGA--CAGCA-TT----TGACCCAATGACGGGTTGTA
gi|54291 : TATAACGAACGG--CTTA-A-CAAT--T-GCC-ATGAAA-CATGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|54292 : TATAAAGAACGG--CCTA-A-CAAT--T-GAT-ATGAAA-CATGCCAGT--TAGCA-TT----TGACCCGATGGCAGGTTGTA
gi|54294 : TATAAAGAACAG--GTTA-A-CAAT--A-GCT-ATGAAA-CACGTCAGA--CGGCA-TT----TAACCCAATGGCAGGTTGTA
gi|54296 : TATAGAGAATGG--CTTA-A-CAGT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TTATCCAATGGCAGG
gi|54308 : ATACAGAACGG--CCTAGA-C-AT--T-GGT-ATGAAA-CATGTCAGA--CGGCA-TT----GGACCCAATGGCAGGTTGTA
gi|54312 : TAAAGAACGG--CCTA-A-CAAG--T-GGT-AGGAAA-CACGTCAGA--CATCA-TT----AGACCCAATGACAGGTTGTA
gi|54315 : TAAAGAACGG--CCTA-A-TAAT--T-GAC-ATAAAA-CA-ATCAGA--CAGCA-TT----TGACCCATTGACAGGTTGTA
gi|54317 : TAAAGAACGG--CCTA-A-CAAT--T-GGT-ATGAAA-CATGTCAGA--CAACA-AT----TAACACGGTGACAAGTTGTA
gi|54325 : AAAGAACAC--CCTA-A-CAATATT-GGT-ATAAAA-CACGTCAGA--CAGCA-TT----CGACCCAATGACAGGTTGT
gi|54336 : AAGAACGG--CCTA-A-CAAT----GGT-ATGGAA-CACGTCCGA--CAGCA-TT----TGAGCAAATGACAGGTTGTA
gi|54353 : G--TCTA-A-CAAT--T-GGT-ATAAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|54368 : -A-CGAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TTACCCAATGACAGGTTGTA
Alignments
lowQualScore : 00 0 0 00 0 1 0 0 00 0 0000
lowQualScore : .. . . .. . . . . .. . ....
lowQualScore : 66 4 4 66 4 0 4 4 55 4 8888
consensus : TATAAAGAACGG--CCTA-A-CAAT--T-GNT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
Reference ( family-71 ) : TATAAAGAACGG--CCTA-A-CAAT--T-GNT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53900 : TATAAAGAATGC--CCTA-A-CAAT--T-GGT-GTGAAA-CACGTCAGA--CAACA-TT----TGACCCAATGGCAGGTTGTA
gi|53902 : tgATAAAGTACGG--CCTG-A-CAAT--T-CGT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53903 : tgcTATAAAGAAATG--TCTA-A-CAAT--T-GGT-ATGAAA-TACGTCAGA--CAGCA-TT----TAACTCAATGACAGGTTATA
gi|53904 : tgATAAAGAGCGG--CTTA-A-TAAT--T-GGT-ATGAAA-CACGTTAGA--CAGCA-TT----TAACCCAATGACAGGTTGTA
gi|53906 : tgcTATGAAGAACGG--CCAA-A-CAAT--T-GAT-ATGAAA-CATGTCAGA--CAGCA-TT----TGGCCCAATGGCAGGTTGTA
gi|53907 : tgTATAAAGAACGG--TCTA-A-TAAT--T-GGT-ATGAAA-CACGTCAGA--CA-----T----TGACCCAATGACAGGTTGTA
gi|53908 : tgTATAAAGAACGG--CCTA-A-CAAC--C-GTT-ATGAAA-CACGTTAGA--CAGCA-TT----TGACCCATTGGCAGGTTGTA
gi|53909 : tgTATAAA-AACGG--CTTA-A-GAAT--T-GCT-ATGAAA-CACATCAGA--CATCA-TT----TGACCCAATGACAAGTTATA
gi|53912 : tgATAAAGAACGG--CCTA-A-CAAT--A-GGT-ATGTAG-CACGCCAGA--CAGCA-TT----TGACTCAATGACAGGTTGTA
gi|53915 : tgcATAAAGAATGG--CCTA-A-CAAT--T-AGC-ATGAAG-CGCGTCAGA--CAGCA-TT----TGGCCCAATGACAAGTTGTA
gi|53916 : tggATAAAGAATGG--CTTA-A-CAGT--T-GTT-GTGAAA-CACGTTAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53918 : tgcTATAAAGAAAGG--CTTA-A-CAAT--T-GCT-ATGATA-CAGGTCAGA--CAGCA-TT----TGACCAAATGGCGGGTTGTA
gi|53919 : tgTAAAGAACGG--CCTA-A-CAAT--T-GGT-ATGAAG-CACGTCAGA--CAGCA-TT----CGACCTAATGATACGTTGT
gi|53921 : tgcgTATAAAGAACGG--TTTA-A-TAAT--T-GCT-ACGAAA-CACGTCAGA--CAGCA-TT----TGACCCACTGGCAGGTTGTA
gi|53923 : tgATAAAGAACGGATCCTA-A-CAAT--T-GCT-GTGAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGGCAGATTGTA
gi|53924 : tgcTAGAAAGATCGG--CCTA-A-CAAT--T-GGT-ATGAAA-CACGTCTGA--CAGCA-TT----TGACCCAACGATAGCTTGTA
gi|53926 : tgTATGAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAG-CACATCAGA--CAGCA-TT----TGACCCAATGACAGGTCATA
gi|53928 : tgTATAAAGAATGG--CCTA-G-CAAT--T-CGT-ATGAAA-CACGCCAAA--CAGCA-TT----TGACCTCATGACAGGTTTTA
gi|53929 : tgTGTAAAGAATGG--CTTA-A-CAAT--T-CTT-ATGAAA-CACGTCAGA--TAGCA-TT----TCACCCAATGGCAGGTTGTA
gi|53930 : tgTATAAAGAACTG--CATA-A-CAAT--T-GCG-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCTATGGCAGGTTGTA
gi|53937 : tgTATAAAGAAAGG--CCTC-A-TAAT--T-GGT-ATGAAA-CACGCTAGA--GATCA-TT----CGACCCAATGGCAGGTTGTA
gi|53938 : taTATAAAGAACGG--TCTA-A--AAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TTAAACAATGACAGGTTG
gi|53939 : tgTATAAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CGCATCAGA--CAGCA-TT----TGACCCAATGACAG
gi|53940 : tgATAACGTACGG--CTTA-A-CAAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TGGCCCATTGGCAGGTTGTA
gi|53941 : tgaAAAGAACGG--ACTA-A-CAAT--G-GGT-GTGAAA-CACGTCAGA--CAACA-TT----TGACCCAATGTCAAGTTGTA
gi|53942 : tgtgcTATAAAGAACGG--CCTA-A-CAAT--T-GGT-ATGAAA-CATGTTATG--CAGCA-TT----TTACTCAATGGCAGTTTGTA
gi|53943 : tgTATAAAGAACTG--CATA-A-CAAT--T-GCT-ATGAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGGCAGG
gi|53944 : tgTATTAAGAACGG--CTTA---CAAT--T-GCT-ATGATA-CACGTCAGA--CAGCA-TT----TAACCCAATGGCAGGTTGTA
gi|53945 : tgTATGAAAAACGG--CTTA-A-CAAT--T-GCT-ATAAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGCAGGT
gi|53946 : tgTATGGAAAACGG--CTTA-A-CAAT--T-GCT-AAGAAA-CACGTCAGA--CAGCA-CT----TGACCCAATGGCAGATTGTA
gi|53949 : tgAACAA--CCCA-A-TAAT--T-GGT-ATTAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGACAGGTTGT
gi|53950 : tgcataTATAAAGAACAG--CTTA-A-CAAT--T-GGT-TTCAAA-CACGTCAGA--GAGCA-TT----TGACCCAATGGCA-GTTGTA
gi|53951 : tgTGTGAAAAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGACAGGTCATA
gi|53955 : tgTGTAAAAAGCAG--CCTT-A-CAAT--T-GGT-ATAAAA-CACGTCAGA--TAGCA-TT----TCACCCAATGATAGGTTGTA
gi|53958 : tgTATAAAGAACGG--CTTA-A-CAAT--C-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TTAACCAATGGAAGGTTGTA
gi|53962 : tgTATAAAGAATGG--CCTA-A-CAAT--T-GGA-ACGAAA-CACGTCAGA--CAGCA-AT----TGACCAAATGGCAGGT
gi|53964 : taTATACAGAACGG--CTTA-A-TAAT--T-GCT-ATGAAA-CACGACAGA--CAGCA-TT----TGACCCAATGGCATATTGTA
gi|53965 : tgTGTGAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGGCCCAATGGCAGGTCATA
gi|53966 : tgTATGAAAAACAG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGAAGGTCATA
gi|53972 : tgACAAAGAACGG--CATA-A-CAAT--T-GGT-ATGAAA-CACATCAGA--CAACA-TC----TGACTCAACGGTAGGTTGTA
gi|53973 : tgcTATAAAGAAGGG--CTTA-A-CAAT--T-GCC-ATGAAA-CACGTC-GA--CAGCA-TT----TTACCCAATGGCAGG
gi|53974 : tgTATAAAGAACGG--CTTA-A-CAAT--T-GCT-ACGAAA-CACGTCAGA--CAGCA-TT----TTACCCAACGGCACGCTATA
gi|53976 : tgTATAAAGAACGC--TTTA-A-CAAT--TTGCC-ATGAAA-CGCGTCAGA--CAGCG-TT----TGACCCAATGGCAGGTTGTA
gi|53977 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGACAGGTCATA
gi|53978 : tgTATAAAGAACGG--CTTA-A-CGAT--T-GCT-ATGGAA-CACCTCAAA--CAGCA-TTTAACTAACCCAATGACAGGTTGTA
gi|53979 : tgTATGAAGAACGG--CCTA-A-CAAT--T-GGT-ATGACA-CATGTCAGA--CAACA-TT----TGACCAAATGGTATATTGTA
gi|53980 : tgTGTAAAGAACGG--CTTA-A-CAAT--T-GCC-AAGAAAACACATCAGA--CAGCA-TT----TGACCCAATGGTAGGTTGTA
gi|53982 : tgTATAAAGAACGG--GTTA-A-TAAT--T-ACT-TTGAAA-CATGTCAGG--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53984 : tgTATAAAGA-------TTA-A-CAAT--T-GCT-ATGAAA-CACGCGAGA--CAGCA-TT----TGACCCAATGACAGATTGT
gi|53986 : tgATTAGGAAAGG--TGTA-A-CAAT--A-GAT-ATGAAG-CACATCGGA--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53988 : tgaTATAAA-AATGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGTAGGTCATA
gi|53990 : tgTATAAAGAGTGG--CTTA-A-CGAT--T-GCT-ATGAAA-CACGACAGA--CAGCA-TT----TTACCCAATGACAGG
gi|53992 : tgTACAAAGAACGG--CTTA---CAAT--T-GGT-ATGAGA-CACGTCAGA--CAGTA-TT----TGAACCAATGGAAGGTTGCA
gi|53993 : tgTATAATGAATGG--CTTA-A-CAAT--T-GCT-ATGAAA-CATGTCAGA--CAGCA-TT----TTACCCAATGGCAGG
gi|53994 : tgTATGAAAAAAAG--CTTA-A-CAAT--T-GCT-AGGAAA-CACATCAGA--CAGC--TT----TGACCCAATAACAGATTGT
gi|53995 : tgTATGAAAACCGG--TTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATAACAGGCCGTA
gi|53996 : tgTATAAAGAACGG--CTTA-A-CAAT--T-GCT-ATGGAA-CACGTCA-----AACA-TT----TGACCCAAGGACAGGCTGTA
gi|53997 : tgTGAATAACGG--CTTA-A-CAAT--G-GCT-ATGAAA-TACGTCAGC--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53998 : tgcgTGTAAAAAACGG--CTTA-A-CAAT--G-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGATAGGTCATA
gi|53999 : tgTATTAAGAATGG--CTTA-A-CAAT--T-GCT-ATGAAA-CAGGTCAGA--CATCA-TT----TAACCCAATGGAAGGTTGTA
gi|54001 : tgTATGAAAAACGG--CCTA-A-TAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGAAAGTCATA
gi|54002 : tgTGTGAAAAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAACA-TT----TGACTCAATGATAGGTTATA
gi|54005 : tgTATAAAGAATAG--CCTA-A-CAAT--T-TGT-ATGAAA-CACACTAGG--CAGCA-GT----TGACTCAATGGCAGGTTATA
gi|54007 : tgTATAAAGAACGG---CTA-ATCAAT--T-GCT-ATGAAA-CTCGTCAGA--CAGCA-TG----TGACCGAATGGCAGGTTGTA
gi|54009 : tgTATAAAGAACGG--CCTA-A-CAAT--A-GGT-ATAAAA-TACGTCAGA--CAGCA-TT----TGACTCAATG
gi|54010 : taTATGAAAAAAGG--CTTA-A-TAAT--T-GCT-ATGAAA-CACATCAAA--CAACA--T----TGACCCAATGACAGGTCATAa
gi|54011 : tgTATAAAAAA-GG--CTTA-A-CAAT--T-GTT-GTGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGTAGG
gi|54017 : tgATGAAGAACGA--TCTA-A-CAAC--T-GGT-ATGAAA-CACGCTAGA--CAGCA--T----TGACCCATTGACAGGTTGTA
gi|54020 : tgaTATTAAGAATGG--CCTT-G-CAAT--T-GGT-ATGAAA-CATGTCAGAATCAGCA-TT----TGACGCAAAGGCAGGTTGTA
gi|54022 : tgTATAAA-AACAG--CCCA-A-CATT--T-AGT-ATAAAA-CATGTCAGA--CAGCA-AT----TGACCCAATGGCAGGTTGTA
gi|54023 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54024 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54025 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54026 : tgTATAAAGAACGG--CTTA-A-CAAT--T-GGC-ATGAAA-CTCGTCAGA--CAGCA-TT----TTACC------CAGGTTGTA
gi|54029 : tgTATGAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGTAGG
gi|54246 : taTATAAAGAACAC--CGTA-A-CAAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TGATCCAATAGCAGGTTGTA
gi|54249 : gTATAAAGAATGG--CGTA-A-CAGT--T-GCT-ATGAAA-CATGTCAGA--CAGCA-TT----TGCCCCGATGACAGGTTGTA
gi|54250 : gTATAAAGAACGG--CTTA-A-CAAT--T-GCC-ATGAAA-CACGCCAGA--CAGCA-TT----TGACTCAATGGTAGGTTGT
gi|54251 : gTATAAAGAAGGG--CCTA-A-CAAC--T-GGT-ATGAAA-CA-----GA--CAGCA-TT----TGACCCGATGGCAGGTTGTA
gi|54253 : gTATAAAGAACGG--CCTA-A-CAAC--T-GCT-ATGAAA-CACATCGGA--CAGCA-TT----TAACCCAATGGCAGG
gi|54255 : gTATAAAGAACGG--CTTA-A-CAAT--T-GCT-ATGACG-TACATCAGA--CAGCA-TT----TGACCAAGTGACAGGTTGTA
gi|54259 : gTATGAAAAACGG--CTTC-G-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGACAGGCCGTA
gi|54261 : gTATGAAAAACAG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAACA-TT----TGACCTAATGACAGGCCGTA
gi|54262 : gTGTGAAAAACGG--CTTA-A-CAAT--T-GGTTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGATAGGTCATA
gi|54263 : gATAAAGAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACGTCAGA--CAGCATTT----TGACCCAATGGCA
gi|54264 : gcTATGAA-AACGG--CTCA-A-CAAT--T-GCT-ATGAAA-CATGTCAGA--CAGCA-TC----TGACCCGATGACAGATTGTA
gi|54265 : gTATAAAGGAGAG--TCTA-A-CAAT--T-AGT-AAGAAA-CACGTCAGA--CAGCA-TT----TGACCCACTGGCACGTT
gi|54290 : gTATAAAGAACAG--CCTA-A-CATT--T-GGT-ATGAAG-CACGGCAGA--CAGCA-TT----TGACCCAATGACGGGTTGTA
gi|54291 : TATAACGAACGG--CTTA-A-CAAT--T-GCC-ATGAAA-CATGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|54292 : TATAAAGAACGG--CCTA-A-CAAT--T-GAT-ATGAAA-CATGCCAGT--TAGCA-TT----TGACCCGATGGCAGGTTGTA
gi|54294 : TATAAAGAACAG--GTTA-A-CAAT--A-GCT-ATGAAA-CACGTCAGA--CGGCA-TT----TAACCCAATGGCAGGTTGTA
gi|54296 : TATAGAGAATGG--CTTA-A-CAGT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TTATCCAATGGCAGG
gi|54308 : ATACAGAACGG--CCTAGA-C-AT--T-GGT-ATGAAA-CATGTCAGA--CGGCA-TT----GGACCCAATGGCAGGTTGTA
gi|54312 : TAAAGAACGG--CCTA-A-CAAG--T-GGT-AGGAAA-CACGTCAGA--CATCA-TT----AGACCCAATGACAGGTTGTA
gi|54315 : TAAAGAACGG--CCTA-A-TAAT--T-GAC-ATAAAA-CA-ATCAGA--CAGCA-TT----TGACCCATTGACAGGTTGTA
gi|54317 : TAAAGAACGG--CCTA-A-CAAT--T-GGT-ATGAAA-CATGTCAGA--CAACA-AT----TAACACGGTGACAAGTTGTA
gi|54325 : AAAGAACAC--CCTA-A-CAATATT-GGT-ATAAAA-CACGTCAGA--CAGCA-TT----CGACCCAATGACAGGTTGT
gi|54336 : AAGAACGG--CCTA-A-CAAT----GGT-ATGGAA-CACGTCCGA--CAGCA-TT----TGAGCAAATGACAGGTTGTA
gi|54353 : G--TCTA-A-CAAT--T-GGT-ATAAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|54368 : -A-CGAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TTACCCAATGACAGGTTGTA
blockSeqs : G
blockSeqs : G
blockSeqs : G
blockSeqs : A
blockSeqs : G
blockSeqs : T
blockSeqs : C
blockSeqs : G
blockSeqs : G
blockSeqs : T
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : G
blockSeqs : T
blockSeqs : C
blockSeqs : G
blockSeqs : G
blockSeqs : C
blockSeqs : G
blockSeqs : G
blockSeqs : G
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : G
blockSeqs : G
blockSeqs : T
blockSeqs : G
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : T
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : A
blockSeqs : C
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : T
blockSeqs : G
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : T
blockSeqs : G
blockSeqs : G
blockSeqs : G
blockSeqs : T
blockSeqs : T
blockSeqs : T
blockSeqs : G
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : C
blockSeqs : G
blockSeqs : C
blockSeqs : C
blockSeqs : G
blockSeqs : G
blockSeqs : C
blockSeqs : A
blockSeqs : C
blockSeqs : G
blockSeqs : G
blockSeqs : G
blockSeqs : A
blockSeqs : G
blockSeqs : G
blockSeqs : G
blockSeqs : G
blockSeqs : G
blockSeqCons :
originalCons : TATAAAGAACGG--CCTA-A-CAAT--T-GNT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
finalCons : TATAAAGAACGG--CCTA-A-CAAT--T-GNT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
Alignments
lowQualScore : 00 0 0 00 0 1 0 0 00 0 0000
lowQualScore : .. . . .. . . . . .. . ....
lowQualScore : 66 4 4 66 4 0 4 4 55 4 8888
consensus : TATAAAGAACGG--CCTA-A-CAAT--T-GNT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
Reference ( family-71 ) : TATAAAGAACGG--CCTA-A-CAAT--T-GNT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53900 : TATAAAGAATGC--CCTA-A-CAAT--T-GGT-GTGAAA-CACGTCAGA--CAACA-TT----TGACCCAATGGCAGGTTGTA
gi|53902 : tgATAAAGTACGG--CCTG-A-CAAT--T-CGT-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53903 : tgcTATAAAGAAATG--TCTA-A-CAAT--T-GGT-ATGAAA-TACGTCAGA--CAGCA-TT----TAACTCAATGACAGGTTATA
gi|53904 : tgATAAAGAGCGG--CTTA-A-TAAT--T-GGT-ATGAAA-CACGTTAGA--CAGCA-TT----TAACCCAATGACAGGTTGTA
gi|53906 : tgcTATGAAGAACGG--CCAA-A-CAAT--T-GAT-ATGAAA-CATGTCAGA--CAGCA-TT----TGGCCCAATGGCAGGTTGTA
gi|53907 : tgTATAAAGAACGG--TCTA-A-TAAT--T-GGT-ATGAAA-CACGTCAGA--CA-----T----TGACCCAATGACAGGTTGTA
gi|53908 : tgTATAAAGAACGG--CCTA-A-CAAC--C-GTT-ATGAAA-CACGTTAGA--CAGCA-TT----TGACCCATTGGCAGGTTGTA
gi|53909 : tgTATAAA-AACGG--CTTA-A-GAAT--T-GCT-ATGAAA-CACATCAGA--CATCA-TT----TGACCCAATGACAAGTTATA
gi|53912 : tgATAAAGAACGG--CCTA-A-CAAT--A-GGT-ATGTAG-CACGCCAGA--CAGCA-TT----TGACTCAATGACAGGTTGTA
gi|53915 : tgcATAAAGAATGG--CCTA-A-CAAT--T-AGC-ATGAAG-CGCGTCAGA--CAGCA-TT----TGGCCCAATGACAAGTTGTA
gi|53916 : tggATAAAGAATGG--CTTA-A-CAGT--T-GTT-GTGAAA-CACGTTAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53918 : tgcTATAAAGAAAGG--CTTA-A-CAAT--T-GCT-ATGATA-CAGGTCAGA--CAGCA-TT----TGACCAAATGGCGGGTTGTA
gi|53919 : tgTAAAGAACGG--CCTA-A-CAAT--T-GGT-ATGAAG-CACGTCAGA--CAGCA-TT----CGACCTAATGATACGTTGT
gi|53921 : tgcgTATAAAGAACGG--TTTA-A-TAAT--T-GCT-ACGAAA-CACGTCAGA--CAGCA-TT----TGACCCACTGGCAGGTTGTA
gi|53923 : tgATAAAGAACGGATCCTA-A-CAAT--T-GCT-GTGAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGGCAGATTGTA
gi|53924 : tgcTAGAAAGATCGG--CCTA-A-CAAT--T-GGT-ATGAAA-CACGTCTGA--CAGCA-TT----TGACCCAACGATAGCTTGTA
gi|53926 : tgTATGAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAG-CACATCAGA--CAGCA-TT----TGACCCAATGACAGGTCATA
gi|53928 : tgTATAAAGAATGG--CCTA-G-CAAT--T-CGT-ATGAAA-CACGCCAAA--CAGCA-TT----TGACCTCATGACAGGTTTTA
gi|53929 : tgTGTAAAGAATGG--CTTA-A-CAAT--T-CTT-ATGAAA-CACGTCAGA--TAGCA-TT----TCACCCAATGGCAGGTTGTA
gi|53930 : tgTATAAAGAACTG--CATA-A-CAAT--T-GCG-ATGAAA-CACGTCAGA--CAGCA-TT----TGACCCTATGGCAGGTTGTA
gi|53937 : tgTATAAAGAAAGG--CCTC-A-TAAT--T-GGT-ATGAAA-CACGCTAGA--GATCA-TT----CGACCCAATGGCAGGTTGTA
gi|53938 : taTATAAAGAACGG--TCTA-A--AAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TTAAACAATGACAGGTTG
gi|53939 : tgTATAAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CGCATCAGA--CAGCA-TT----TGACCCAATGACAG
gi|53940 : tgATAACGTACGG--CTTA-A-CAAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TGGCCCATTGGCAGGTTGTA
gi|53941 : tgaAAAGAACGG--ACTA-A-CAAT--G-GGT-GTGAAA-CACGTCAGA--CAACA-TT----TGACCCAATGTCAAGTTGTA
gi|53942 : tgtgcTATAAAGAACGG--CCTA-A-CAAT--T-GGT-ATGAAA-CATGTTATG--CAGCA-TT----TTACTCAATGGCAGTTTGTA
gi|53943 : tgTATAAAGAACTG--CATA-A-CAAT--T-GCT-ATGAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGGCAGG
gi|53944 : tgTATTAAGAACGG--CTTA---CAAT--T-GCT-ATGATA-CACGTCAGA--CAGCA-TT----TAACCCAATGGCAGGTTGTA
gi|53945 : tgTATGAAAAACGG--CTTA-A-CAAT--T-GCT-ATAAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGCAGGT
gi|53946 : tgTATGGAAAACGG--CTTA-A-CAAT--T-GCT-AAGAAA-CACGTCAGA--CAGCA-CT----TGACCCAATGGCAGATTGTA
gi|53949 : tgAACAA--CCCA-A-TAAT--T-GGT-ATTAAA-CACGCCAGA--CAGCA-TT----TGACCCAATGACAGGTTGT
gi|53950 : tgcataTATAAAGAACAG--CTTA-A-CAAT--T-GGT-TTCAAA-CACGTCAGA--GAGCA-TT----TGACCCAATGGCA-GTTGTA
gi|53951 : tgTGTGAAAAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGACAGGTCATA
gi|53955 : tgTGTAAAAAGCAG--CCTT-A-CAAT--T-GGT-ATAAAA-CACGTCAGA--TAGCA-TT----TCACCCAATGATAGGTTGTA
gi|53958 : tgTATAAAGAACGG--CTTA-A-CAAT--C-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TTAACCAATGGAAGGTTGTA
gi|53962 : tgTATAAAGAATGG--CCTA-A-CAAT--T-GGA-ACGAAA-CACGTCAGA--CAGCA-AT----TGACCAAATGGCAGGT
gi|53964 : taTATACAGAACGG--CTTA-A-TAAT--T-GCT-ATGAAA-CACGACAGA--CAGCA-TT----TGACCCAATGGCATATTGTA
gi|53965 : tgTGTGAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGGCCCAATGGCAGGTCATA
gi|53966 : tgTATGAAAAACAG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGAAGGTCATA
gi|53972 : tgACAAAGAACGG--CATA-A-CAAT--T-GGT-ATGAAA-CACATCAGA--CAACA-TC----TGACTCAACGGTAGGTTGTA
gi|53973 : tgcTATAAAGAAGGG--CTTA-A-CAAT--T-GCC-ATGAAA-CACGTC-GA--CAGCA-TT----TTACCCAATGGCAGG
gi|53974 : tgTATAAAGAACGG--CTTA-A-CAAT--T-GCT-ACGAAA-CACGTCAGA--CAGCA-TT----TTACCCAACGGCACGCTATA
gi|53976 : tgTATAAAGAACGC--TTTA-A-CAAT--TTGCC-ATGAAA-CGCGTCAGA--CAGCG-TT----TGACCCAATGGCAGGTTGTA
gi|53977 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGACAGGTCATA
gi|53978 : tgTATAAAGAACGG--CTTA-A-CGAT--T-GCT-ATGGAA-CACCTCAAA--CAGCA-TTTAACTAACCCAATGACAGGTTGTA
gi|53979 : tgTATGAAGAACGG--CCTA-A-CAAT--T-GGT-ATGACA-CATGTCAGA--CAACA-TT----TGACCAAATGGTATATTGTA
gi|53980 : tgTGTAAAGAACGG--CTTA-A-CAAT--T-GCC-AAGAAAACACATCAGA--CAGCA-TT----TGACCCAATGGTAGGTTGTA
gi|53982 : tgTATAAAGAACGG--GTTA-A-TAAT--T-ACT-TTGAAA-CATGTCAGG--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|53984 : tgTATAAAGA-------TTA-A-CAAT--T-GCT-ATGAAA-CACGCGAGA--CAGCA-TT----TGACCCAATGACAGATTGT
gi|53986 : tgATTAGGAAAGG--TGTA-A-CAAT--A-GAT-ATGAAG-CACATCGGA--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53988 : tgaTATAAA-AATGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGTAGGTCATA
gi|53990 : tgTATAAAGAGTGG--CTTA-A-CGAT--T-GCT-ATGAAA-CACGACAGA--CAGCA-TT----TTACCCAATGACAGG
gi|53992 : tgTACAAAGAACGG--CTTA---CAAT--T-GGT-ATGAGA-CACGTCAGA--CAGTA-TT----TGAACCAATGGAAGGTTGCA
gi|53993 : tgTATAATGAATGG--CTTA-A-CAAT--T-GCT-ATGAAA-CATGTCAGA--CAGCA-TT----TTACCCAATGGCAGG
gi|53994 : tgTATGAAAAAAAG--CTTA-A-CAAT--T-GCT-AGGAAA-CACATCAGA--CAGC--TT----TGACCCAATAACAGATTGT
gi|53995 : tgTATGAAAACCGG--TTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATAACAGGCCGTA
gi|53996 : tgTATAAAGAACGG--CTTA-A-CAAT--T-GCT-ATGGAA-CACGTCA-----AACA-TT----TGACCCAAGGACAGGCTGTA
gi|53997 : tgTGAATAACGG--CTTA-A-CAAT--G-GCT-ATGAAA-TACGTCAGC--CAGCA-TT----TGACCCAATGACAGGTTGTA
gi|53998 : tgcgTGTAAAAAACGG--CTTA-A-CAAT--G-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGATAGGTCATA
gi|53999 : tgTATTAAGAATGG--CTTA-A-CAAT--T-GCT-ATGAAA-CAGGTCAGA--CATCA-TT----TAACCCAATGGAAGGTTGTA
gi|54001 : tgTATGAAAAACGG--CCTA-A-TAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGAAAGTCATA
gi|54002 : tgTGTGAAAAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAACA-TT----TGACTCAATGATAGGTTATA
gi|54005 : tgTATAAAGAATAG--CCTA-A-CAAT--T-TGT-ATGAAA-CACACTAGG--CAGCA-GT----TGACTCAATGGCAGGTTATA
gi|54007 : tgTATAAAGAACGG---CTA-ATCAAT--T-GCT-ATGAAA-CTCGTCAGA--CAGCA-TG----TGACCGAATGGCAGGTTGTA
gi|54009 : tgTATAAAGAACGG--CCTA-A-CAAT--A-GGT-ATAAAA-TACGTCAGA--CAGCA-TT----TGACTCAATG
gi|54010 : taTATGAAAAAAGG--CTTA-A-TAAT--T-GCT-ATGAAA-CACATCAAA--CAACA--T----TGACCCAATGACAGGTCATAa
gi|54011 : tgTATAAAAAA-GG--CTTA-A-CAAT--T-GTT-GTGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGTAGG
gi|54017 : tgATGAAGAACGA--TCTA-A-CAAC--T-GGT-ATGAAA-CACGCTAGA--CAGCA--T----TGACCCATTGACAGGTTGTA
gi|54020 : tgaTATTAAGAATGG--CCTT-G-CAAT--T-GGT-ATGAAA-CATGTCAGAATCAGCA-TT----TGACGCAAAGGCAGGTTGTA
gi|54022 : tgTATAAA-AACAG--CCCA-A-CATT--T-AGT-ATAAAA-CATGTCAGA--CAGCA-AT----TGACCCAATGGCAGGTTGTA
gi|54023 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54024 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54025 : tgTGTGAATAACGG--CCTA-A-CAAT--G-GTT-ATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGGCAGGTCATA
gi|54026 : tgTATAAAGAACGG--CTTA-A-CAAT--T-GGC-ATGAAA-CTCGTCAGA--CAGCA-TT----TTACC------CAGGTTGTA
gi|54029 : tgTATGAAAAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGGTAGG
gi|54246 : taTATAAAGAACAC--CGTA-A-CAAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TGATCCAATAGCAGGTTGTA
gi|54249 : gTATAAAGAATGG--CGTA-A-CAGT--T-GCT-ATGAAA-CATGTCAGA--CAGCA-TT----TGCCCCGATGACAGGTTGTA
gi|54250 : gTATAAAGAACGG--CTTA-A-CAAT--T-GCC-ATGAAA-CACGCCAGA--CAGCA-TT----TGACTCAATGGTAGGTTGT
gi|54251 : gTATAAAGAAGGG--CCTA-A-CAAC--T-GGT-ATGAAA-CA-----GA--CAGCA-TT----TGACCCGATGGCAGGTTGTA
gi|54253 : gTATAAAGAACGG--CCTA-A-CAAC--T-GCT-ATGAAA-CACATCGGA--CAGCA-TT----TAACCCAATGGCAGG
gi|54255 : gTATAAAGAACGG--CTTA-A-CAAT--T-GCT-ATGACG-TACATCAGA--CAGCA-TT----TGACCAAGTGACAGGTTGTA
gi|54259 : gTATGAAAAACGG--CTTC-G-CAAT--T-GCT-ATGAAA-CACATCAGA--CAGCA-TT----TGACCCAATGACAGGCCGTA
gi|54261 : gTATGAAAAACAG--CTTA-A-CAAT--T-GCT-ATGAAA-CACATCAGA--CAACA-TT----TGACCTAATGACAGGCCGTA
gi|54262 : gTGTGAAAAACGG--CTTA-A-CAAT--T-GGTTATGAAA-CACATCAGA--CAGCA-TT----TGACTCAATGATAGGTCATA
gi|54263 : gATAAAGAACGG--CTTA-A-CAAT--T-GCT-ATGAAA-CACGTCAGA--CAGCATTT----TGACCCAATGGCA
gi|54264 : gcTATGAA-AACGG--CTCA-A-CAAT--T-GCT-ATGAAA-CATGTCAGA--CAGCA-TC----TGACCCGATGACAGATTGTA
gi|54265 : gTATAAAGGAGAG--TCTA-A-CAAT--T-AGT-AAGAAA-CACGTCAGA--CAGCA-TT----TGACCCACTGGCACGTT
gi|54290 : gTATAAAGAACAG--CCTA-A-CATT--T-GGT-ATGAAG-CACGGCAGA--CAGCA-TT----TGACCCAATGACGGGTTGTA
gi|54291 : TATAACGAACGG--CTTA-A-CAAT--T-GCC-ATGAAA-CATGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|54292 : TATAAAGAACGG--CCTA-A-CAAT--T-GAT-ATGAAA-CATGCCAGT--TAGCA-TT----TGACCCGATGGCAGGTTGTA
gi|54294 : TATAAAGAACAG--GTTA-A-CAAT--A-GCT-ATGAAA-CACGTCAGA--CGGCA-TT----TAACCCAATGGCAGGTTGTA
gi|54296 : TATAGAGAATGG--CTTA-A-CAGT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TTATCCAATGGCAGG
gi|54308 : ATACAGAACGG--CCTAGA-C-AT--T-GGT-ATGAAA-CATGTCAGA--CGGCA-TT----GGACCCAATGGCAGGTTGTA
gi|54312 : TAAAGAACGG--CCTA-A-CAAG--T-GGT-AGGAAA-CACGTCAGA--CATCA-TT----AGACCCAATGACAGGTTGTA
gi|54315 : TAAAGAACGG--CCTA-A-TAAT--T-GAC-ATAAAA-CA-ATCAGA--CAGCA-TT----TGACCCATTGACAGGTTGTA
gi|54317 : TAAAGAACGG--CCTA-A-CAAT--T-GGT-ATGAAA-CATGTCAGA--CAACA-AT----TAACACGGTGACAAGTTGTA
gi|54325 : AAAGAACAC--CCTA-A-CAATATT-GGT-ATAAAA-CACGTCAGA--CAGCA-TT----CGACCCAATGACAGGTTGT
gi|54336 : AAGAACGG--CCTA-A-CAAT----GGT-ATGGAA-CACGTCCGA--CAGCA-TT----TGAGCAAATGACAGGTTGTA
gi|54353 : G--TCTA-A-CAAT--T-GGT-ATAAAA-CACGTCAGA--CAGCA-TT----TGACCCAATGGCAGGTTGTA
gi|54368 : -A-CGAT--T-GGT-ATGAAA-CACGTCAGA--CAGCA-TT----TTACCCAATGACAGGTTGTA