lowQualScore : 1 1 44 2 4 222 2222 2 2 1 4 11 44 1 9999 1 1 11 1 3333 2 99999999999999999 1 1 0 0 1 0 0 0 0 55 11 1 777 1 1 1 2 22 1
lowQualScore : . . .. . . ... .... . . . . .. .. . .... . . .. . .... . ................. . . . . . . . . . .. .. . ... . . . . .. .
lowQualScore : 3 3 55 7 0 333 8888 7 7 3 0 88 55 3 2222 3 3 88 2 9999 5 66666666666666666 0 0 9 9 9 9 9 9 9 00 88 0 666 9 0 0 0 33 7
consensus : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAA-T----A-AAA---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
Reference ( gi|31420 ) : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAA-T----A-GAA---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31409 : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAA-T----A-GAA---T-------------T-TG-T-T-A---TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31410 : tATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTA-AAA--T--GT-T----T-CTG-T--TGAA-T----A-GAA---T-------------T-TA-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31411 : tATTTATT-A-CATTTT--CAG-C-A---GT-----A-A-AT-ATTG-AAA--T--TC-A----T-CTG-T--TGAA-T----A-AAA---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31421 : tATTTATT-A-CATTTT--CAG-C-A---GTG----AGA-AT-ATTG-AAA--T--TTCA----T-CCGTT--TGAA-T----A-GAAT--T-------------T-TG-T-T-ATT-TTT-TC-A-C--A-GTG--G--AAAAA-T-A-AC-AAAAGTG--TT-AT
gi|31417 : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAT--T--TT-A----T-CCG-T--TGAA-T----A-GAA---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-TTA-TGCTAATGA-T-A-AC-
gi|31422 : tATTTATT-A-CATTT---CAG-C-AAAGGTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGGG-T------GAA---T-------------TCTG-T-T-T-T-TTT-TC-ACC--A-GTGCTG--AAAAAGT-A-TC-AAAAGTG--T
gi|31423 : ATTTATT-A-CATTTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--A--TC-A----T-CCA-T--TGAA-T----A-AAA--------------------A-T-T-A-TATTT-TC-A-C----TTG-TG--AAAAG-TGA-AC-AA
gi|31424 : ATTTATC-A-AATTTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--T--TT-A----T-CCA-T--TGAA-T----ATGAA-------------------TG-A-T-A---TTT-TC-A-CT-A-GTG------AAAA-T-A-AC-AA
gi|31419 : ATTTATT-A-CATTTT--CAA-C-C---GTG----G-A-AT-ACTG-TAT--TC-TT-A----T-CCA-T--TGAA-T----G-AAA---TGAA----------T-AG----------TT-TC-A-CT-A-GTG------AAAA-T-A-AC-AA
gi|31425 : tATTTATT-A-CGATTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--T--TC-A----T-CCA-C--TGAA-T----A-AAA---A-------------T-GA-T-A-A-T-TTT----A-CT-A-GTG------AAAA-T-A-AC-
gi|31426 : TTTATT-A-CATTTT--CAG-C-A---GTG----A-C-AT-TTTT-AAA--T--TT-A----C-CCG-T--TGAA-TCAGTA-AAA---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAATG--TT-ATT
gi|31413 : TTTATTTA-CATCTT--CAG-C-A---GTG----G-A-ATTATTG-AAA--T--TT-A----T-CCG-T--TGAA-T----A-GAA---T-------------T-TG-T-T-A---TTT-TC-A-T--A-GTG-TG---AAAA-T-A-ACAAAAAGTG--TT-ATT
gi|31427 : tgTTTATT-A-CATTTT--CAG-G-A---GTG----A-A-AT-ATTG-AGG--T--TT-A----T-CCG-T--TAAA-T----A-AAA---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC-AA
gi|31414 : TTTATT-A-CATTTT--TAG-C-A---GTG----A-A-AT-ATTGAAAA--T--TT-A----T-CC--T--TGAG-T----A-AAA---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-GTG-T---AAAAA-T-ATTC-AAAAGTG--TT-ATT
gi|31412 : tgTTTATT-A-CATTTT--CAG-C-A---TTG----A-A-AA-ATTG-AAA--T--TT-T----A-CCG-T--TAAA-T----A-AAA---T-------------T-TA-A-T-A-T-TTT-TA-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31416 : tgTTTATT-A-CATTTT--CAG-CAA---GTG------A-AT-ATTG-AAA--A--TT-AT---T-CCG-T--TGAA-T----A-AA------------------T-TG-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC---AAGTG--TT-ATT
gi|31415 : tgTTTATT-A-CATTTT--CAG-CAA---GTG------A-AT-ATTG-AAA--A--TT-AT---T-CCG-T--TGAA-T----A-AA------------------T-TG-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC---AAGTG--TT-ATT
gi|31429 : tgTTTATT-A-CATTTT--CAG-C-A---GTG----A----T-ATTG-AAA--T--TT-AAATGT-CCG-T--TGAA-TT---A-GAAAATT-------------T-TG-TGT-A-T-TTT-TC-A-CATA-GTG--G--AAAAA-T---AC-AAAAGTG--TT-ATT
gi|31430 : TTTATT---CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCC-G--TGAA-T------GAA---T-------------T-TG-T-TAA-T-TTT-TCAA-C--A-GTG-TGA-AAAAA-G-A-AC-AAGTGTT--TT-ATT
gi|31431 : TTTATT-A-CATTCT---AG-C-A---GTG----A-A--T-ATTGGAAA--TA-TC-AACG-T-TTG-T--TGAG-T----A-AAA---T-------------T-TG-T-T-A-T-TTTTTC-A-C--A-GTG-TG--AAAAA-T-A-CC-AAAAGTG--TT-ATT
gi|31428 : TTTATT-A-CATTT---CAG-C-A---GTG----A-AGAT-A-TG-AAT--T--TT-A----T-CCG-T--TGAATT----A-GAA-----------------T-TG-T-T-A-T-TTT-TC-A-C--ATATG-CT--AATGA-T-A-AC-
gi|31432 : TTTATT-A-CATTTT--CAA-C-A---GTG----A-A-AT-ACTA-AAA--T--AT-A----T-CCA-T--TGAA-T----A-AAA---A-------------T-TG-A-T-G-T-TT-------C--A-GT--------AAA-T-A-AC---TAGTG--TT-ATT
gi|31433 : TTTATT-AACATTTTG-CAGTC-A---GTG----ATA-AT-ATTGTAAA--T--TT--------CCG-A--TATA-T----A-GCA---T-------------T-T----T-A-T-TTT-TC-A-C--A-GTG-TG---ACAA-T-A-AC-AACAGTGTATT-ATT
gi|31434 : TTCATC-A-TATTCT--CAA-C-A---GTA----A-A-AT-ATTG-TAT--T--TC-A----T-CCG-T--CGAA-T----A-AAA-----------------T-CG-A-T-A---TTT-TC-A-CT-A-GTG------AAAA-T-------AAAGTG--TT-
gi|31435 : TTTATT-A-CATTTT--CAA-C-A---ATG----A-A-AT-CCAG-AAA--A--TT-A----T-CGA-T--TGAA-T----A-AAA---A-------------T-TA-A-T-A---TTT-TC-A-C--A-G
gi|31436 : TTATT-A-CATTTT--TAGGC-A---GTG----A-ATAT-ATTG-AAAATT--TT-A----T-CCG-T--TGAG-T----A-AAA---T-------------T-TG-T-T-A-T-TT-------C--A-GTG-TG--AAAAA-T---AC--AAAGTG--TT-ATT
gi|31437 : TTATT---CATTTTTACAG-C-A---GTG----A-A-A--ATTG-AAA--T--TT-A----T-CAG-TGATGAA-T----A-GAA---T-------------T-TG-T-T-A-T-TTT-TC-G-C--A--TG-TG--AAAAA-T-A-AC-ATAAG-G--TTGATT
gi|31438 : TTATT-A-TATATT--TAA-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCA-T--TAAA-T----ACAAA---TTGATATTTCACCGT-TG-T-T-A---TTT-TC-A-C--A-GTG-TG---AAAA-T-A-A
gi|31418 : ATT-A-CATTTT--TAG-C-G---GTG----A-A-AT-ATTG-AAC--T--TT-A----TCCCG-T--TGAG-T----A-AAA---T-------------C-TGCC-T-ACT-TTT-CC-A-C--A-GTG-TG--AAAAA-T-A-CCAAAAAGTG--TT-ATT
gi|31439 : tattacT-A-CATTTTT-CAG-CGA---GTGTGTAG-A-AT-ATTG-AAA--TGGTG-AG---T-CAG-T--TGAA-T----A-GAA---T-------------T-TG-T-T-A-G-T-------------GTG-TG--AAAAA-T-A-AC-AAAAGT---TT-ATT
gi|31416 : AA-T----A-ACA---C-------------T-TG-T-T-A-T-TTT--C-A-C--A-CTG-TG--AAAAA-T-A-AC-AA
gi|31415 : tgtttattacattttcagcaagtgaatattgaaaattattccgttgaataaaAA-T----A-ACA---C-------------T-TG-T-T-A-T-TTT--C-A-C--A-CTG-TG--AAAAA-T-A-AC-AA
gi|31409 : tgtttattacattttcagcaagtgaatattgaaaattattccgttgaataaa---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-CTG-TG---AAAA-T-A-AC-AAA
gi|31410 : tatttattacattttcagcagtgaaatattgaaatttatccgttgaatagaa---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-CTG-TG--AAAAA-T-A-AT-AAAagtgttatt
gi|31411 : tatttattacattttcagcagtgaaatattaaaatgtttctgttgaatagaa---T-------------T-TG-T-T-A-T-TTT--C-A-C--A-CTG-TG--AAAAA-T-A-AC-AAA--TT--TT-ATTagtgttatt
gi|31421 : tatttattacattttcagcagtaaatattgaaattcatctgttg---T-------------T-TG-T-T-A-T-TTT-TC---C--A-CTG-TG--AAAAAAT-A-AC-AAAAagtgttatt
gi|31426 : atttattacattttcagcagtgagaatattgaaatttcatccgtttgaatagaa---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-CTG-TG--AAAAA-T-A-AC-AAAagtgttat
gi|31413 : tttattacattttcagcagtgacatttttaaatttacccgttgaatcagtaaaa---T-------------T-TG-T-T-A-T-TT--TC-A-C--A-CTA-TG---AAAA-T-A-AC-AAAaatgttatt
gi|31412 : tgtttatttacatcttcagcagtggaattattgaaatttatccgttgaatagaa---T-------------T-TG-T-T-A-T-TTT-TC-A-C--A-CTG-TT--AAAAA-T-A-TT-AAA--TT--TT-ATTaagtgttatt
gi|31431 : tgtttattacattttcagcattgaaaaattgaaattttaccgtta---T-------------T-TG-G-T-A-T-TTT-TC-A-C--A-CTG-TGA-AAAAA-T-A-AC-AAAagtgttatt
gi|31427 : tttattacattctagcagtgaatattggaaatatcaacgtttgttgagtaaaa-------------T-TG-T-T-A-T-TTT--C-A-C--A-CTG-TG--AAAAA-T-A-AC-AAA--TT--TT-ATTagtgttatt
gi|31437 : tttattacattttcaggagtgaaatattgaggtttatccgtta-TG-T-T-A-T-TTT-TC-A-C--A--TG-CG--AAAAA-T-A-AC-AAA
gi|31414 : ttattcatttttacagcagtgaaaattgaaatttatcagtgatgaatagaa-T-A-T-TTT-T--A-C--A-CTG-TG--AAAAA-T-A-AC-AAAtaaggttgatt
Alignments
lowQualScore : 111111111111111
lowQualScore : 1 1 44 2 3 222 2222 2 2 1 3 11 44 1 8888 1 1 11 5555 2 111111111111111 1 1 1 1 555 1 1 1 66 1 999999 1 1 1 2 22 1
lowQualScore : . . .. . . ... .... . . . . .. .. . .... . . .. .... . ............... . . . . ... . . . .. . ...... . . . . .. .
lowQualScore : 3 3 44 6 9 333 7777 6 6 3 9 88 44 3 9999 3 3 88 0000 6 333333333333333 3 3 3 3 999 3 3 3 99 3 777777 3 3 3 8 55 9
consensus : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
Reference ( family-611 ) : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31409 : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A---TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31410 : tATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTA-AAA--T--GT-T----T-CTG-T--TGAAT----A-GAA-T-------------TT-A-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31411 : tATTTATT-A-CATTTT--CAG-C-A---GT-----A-A-AT-ATTG-AAA--T--TC-A----T-CTG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31412 : tTTTATT-A-CATTTT--CAG-C-A---TTG----A-A-AA-ATTG-AAA--T--TT-T----A-CCG-T--TAAAT----A-AAA-T-------------TT-A-A-T-A-T-TTT-TA-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31413 : tgTTTATTTA-CATCTT--CAG-C-A---GTG----G-A-ATTATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A---TTT-TC-A-T--A-GTG-TG---AAAA-T-A-ACAAAAAGTG--TT-ATT
gi|31414 : tgTTTATT-A-CATTTT--TAG-C-A---GTG----A-A-AT-ATTGAAAA--T--TT-A----T-CC--T--TGAGT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-T---AAAAA-T-ATTC-AAAAGTG--TT-ATT
gi|31415 : tgTTTATT-A-CATTTT--CAG-CAA---GTG------A-AT-ATTG-AAA--A--TT-AT---T-CCG-T--TGAAT----A-AA----------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC---AAGTG--TT-ATT
gi|31416 : tgTTTATT-A-CATTTT--CAG-CAA---GTG------A-AT-ATTG-AAA--A--TT-AT---T-CCG-T--TGAAT----A-AA----------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC---AAGTG--TT-ATT
gi|31417 : tgATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAT--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-TTA-TGCTAATGA-T-A-AC-
gi|31418 : tATT-A-CATTTT--TAG-C-G---GTG----A-A-AT-ATTG-AAC--T--TT-A----TCCCG-T--TGAGT----A-AAA-T-------------CT-GCC-T-ACT-TTT-CC-A-C--A-GTG-TG--AAAAA-T-A-CCAAAAAGTG--TT-ATT
gi|31419 : tattacATTTATT-A-CATTTT--CAA-C-C---GTG----G-A-AT-ACTG-TAT--TC-TT-A----T-CCA-T--TGAAT----G-AAA-TGAA----------TA-G----------TT-TC-A-CT-A-GTG------AAAA-T-A-AC-AA
gi|31420 : tATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31421 : ATTTATT-A-CATTTT--CAG-C-A---GTG----AGA-AT-ATTG-AAA--T--TTCA----T-CCGTT--TGAAT----A-GAATT-------------TT-G-T-T-ATT-TTT-TC-A-C--A-GTG--G--AAAAA-T-A-AC-AAAAGTG--TT-AT
gi|31422 : ATTTATT-A-CATTT---CAG-C-AAAGGTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGGGT----G-AAT-T-------------CT-G-T-T-T-T-TTT-TC-ACC--A-GTGCTG--AAAAAGT-A-TC-AAAAGTG--T
gi|31423 : ATTTATT-A-CATTTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--A--TC-A----T-CCA-T--TGAAT----A-AAA------------------A-T-T-A-TATTT-TC-A-C----TTG-TG--AAAAG-TGA-AC-AA
gi|31424 : ATTTATC-A-AATTTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--T--TT-A----T-CCA-T--TGAAT----ATGAA----------------T-G-A-T-A---TTT-TC-A-CT-A-GTG------AAAA-T-A-AC-AA
gi|31425 : ATTTATT-A-CGATTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--T--TC-A----T-CCA-C--TGAAT----A-AAA-A-------------TG-A-T-A-A-T-TTT----A-CT-A-GTG------AAAA-T-A-AC-
gi|31426 : TTTATT-A-CATTTT--CAG-C-A---GTG----A-C-AT-TTTT-AAA--T--TT-A----C-CCG-T--TGAATCAGTA-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAATG--TT-ATT
gi|31427 : TTTATT-A-CATTTT--CAG-G-A---GTG----A-A-AT-ATTG-AGG--T--TT-A----T-CCG-T--TAAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC-AA
gi|31428 : TTTATT-A-CATTT---CAG-C-A---GTG----A-AGAT-A-TG-AAT--T--TT-A----T-CCG-T--TGAAT----T-AGA-A-------------TT-G-T-T-A-T-TTT-TC-A-C--ATATG-CT--AATGA-T-A-AC-
gi|31429 : TTTATT-A-CATTTT--CAG-C-A---GTG----A----T-ATTG-AAA--T--TT-AAATGT-CCG-T--TGAATTAG-A-AAA-T-------------TTTG-TGT-A-T-TTT-TC-A-CATA-GTG--G--AAAAA-T---AC-AAAAGTG--TT-ATT
gi|31430 : TTTATT---CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCC-G--TGAAT------GAA-T-------------TT-G-T-TAA-T-TTT-TCAA-C--A-GTG-TGA-AAAAA-G-A-AC-AAGTGTT--TT-ATT
gi|31431 : TTTATT-A-CATTCT---AG-C-A---GTG----A-A--T-ATTGGAAA--TA-TC-AACG-T-TTG-T--TGAGT----A-AAA-T-------------TT-G-T-T-A-T-TTTTTC-A-C--A-GTG-TG--AAAAA-T-A-CC-AAAAGTG--TT-ATT
gi|31432 : TTTATT-A-CATTTT--CAA-C-A---GTG----A-A-AT-ACTA-AAA--T--AT-A----T-CCA-T--TGAAT----A-AAA-A-------------TT-G-A-T-G-T-TT-------C--A-GT--------AAA-T-A-AC---TAGTG--TT-ATT
gi|31433 : TTTATT-AACATTTTG-CAGTC-A---GTG----ATA-AT-ATTGTAAA--T--TT--------CCG-A--TATAT----A-GCA-T-------------TT-----T-A-T-TTT-TC-A-C--A-GTG-TG---ACAA-T-A-AC-AACAGTGTATT-ATT
gi|31434 : TTCATC-A-TATTCT--CAA-C-A---GTA----A-A-AT-ATTG-TAT--T--TC-A----T-CCG-T--CGAAT----A-AAA---------------TC-G-A-T-A---TTT-TC-A-CT-A-GTG------AAAA-T-------AAAGTG--TT-
gi|31435 : TTTATT-A-CATTTT--CAA-C-A---ATG----A-A-AT-CCAG-AAA--A--TT-A----T-CGA-T--TGAAT----A-AAA-A-------------TT-A-A-T-A---TTT-TC-A-C--A-G
gi|31436 : TTATT-A-CATTTT--TAGGC-A---GTG----A-ATAT-ATTG-AAAATT--TT-A----T-CCG-T--TGAGT----A-AAA-T-------------TT-G-T-T-A-T-TT-------C--A-GTG-TG--AAAAA-T---AC--AAAGTG--TT-ATT
gi|31437 : TTATT---CATTTTTACAG-C-A---GTG----A-A-A--ATTG-AAA--T--TT-A----T-CAG-TGATGAAT----A-GAA-T-------------TT-G-T-T-A-T-TTT-TC-G-C--A--TG-TG--AAAAA-T-A-AC-ATAAG-G--TTGATT
gi|31438 : TTATT-A-TATATT--TAA-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCA-T--TAAAT----ACAAA-TTGATATTTCACCGTT-G-T-T-A---TTT-TC-A-C--A-GTG-TG---AAAA-T-A-A
gi|31439 : T-A-CATTTTT-CAG-CGA---GTGTGTAG-A-AT-ATTG-AAA--TGGTG-AG---T-CAG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A-G-T-------------GTG-TG--AAAAA-T-A-AC-AAAAGT---TT-ATT
Alignments
lowQualScore : 111111111111111
lowQualScore : 1 1 44 2 3 222 2222 2 2 1 3 11 44 1 8888 1 1 11 5555 2 111111111111111 1 1 1 1 555 1 1 1 66 1 999999 1 1 1 2 22 1
lowQualScore : . . .. . . ... .... . . . . .. .. . .... . . .. .... . ............... . . . . ... . . . .. . ...... . . . . .. .
lowQualScore : 3 3 44 6 9 333 7777 6 6 3 9 88 44 3 9999 3 3 88 0000 6 333333333333333 3 3 3 3 999 3 3 3 99 3 777777 3 3 3 8 55 9
consensus : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
Reference ( family-611 ) : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31409 : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A---TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31410 : tATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTA-AAA--T--GT-T----T-CTG-T--TGAAT----A-GAA-T-------------TT-A-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31411 : tATTTATT-A-CATTTT--CAG-C-A---GT-----A-A-AT-ATTG-AAA--T--TC-A----T-CTG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31412 : tTTTATT-A-CATTTT--CAG-C-A---TTG----A-A-AA-ATTG-AAA--T--TT-T----A-CCG-T--TAAAT----A-AAA-T-------------TT-A-A-T-A-T-TTT-TA-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31413 : tgTTTATTTA-CATCTT--CAG-C-A---GTG----G-A-ATTATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A---TTT-TC-A-T--A-GTG-TG---AAAA-T-A-ACAAAAAGTG--TT-ATT
gi|31414 : tgTTTATT-A-CATTTT--TAG-C-A---GTG----A-A-AT-ATTGAAAA--T--TT-A----T-CC--T--TGAGT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-T---AAAAA-T-ATTC-AAAAGTG--TT-ATT
gi|31415 : tgTTTATT-A-CATTTT--CAG-CAA---GTG------A-AT-ATTG-AAA--A--TT-AT---T-CCG-T--TGAAT----A-AA----------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC---AAGTG--TT-ATT
gi|31416 : tgTTTATT-A-CATTTT--CAG-CAA---GTG------A-AT-ATTG-AAA--A--TT-AT---T-CCG-T--TGAAT----A-AA----------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC---AAGTG--TT-ATT
gi|31417 : tgATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAT--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-TTA-TGCTAATGA-T-A-AC-
gi|31418 : tATT-A-CATTTT--TAG-C-G---GTG----A-A-AT-ATTG-AAC--T--TT-A----TCCCG-T--TGAGT----A-AAA-T-------------CT-GCC-T-ACT-TTT-CC-A-C--A-GTG-TG--AAAAA-T-A-CCAAAAAGTG--TT-ATT
gi|31419 : tattacATTTATT-A-CATTTT--CAA-C-C---GTG----G-A-AT-ACTG-TAT--TC-TT-A----T-CCA-T--TGAAT----G-AAA-TGAA----------TA-G----------TT-TC-A-CT-A-GTG------AAAA-T-A-AC-AA
gi|31420 : tATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31421 : ATTTATT-A-CATTTT--CAG-C-A---GTG----AGA-AT-ATTG-AAA--T--TTCA----T-CCGTT--TGAAT----A-GAATT-------------TT-G-T-T-ATT-TTT-TC-A-C--A-GTG--G--AAAAA-T-A-AC-AAAAGTG--TT-AT
gi|31422 : ATTTATT-A-CATTT---CAG-C-AAAGGTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGGGT----G-AAT-T-------------CT-G-T-T-T-T-TTT-TC-ACC--A-GTGCTG--AAAAAGT-A-TC-AAAAGTG--T
gi|31423 : ATTTATT-A-CATTTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--A--TC-A----T-CCA-T--TGAAT----A-AAA------------------A-T-T-A-TATTT-TC-A-C----TTG-TG--AAAAG-TGA-AC-AA
gi|31424 : ATTTATC-A-AATTTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--T--TT-A----T-CCA-T--TGAAT----ATGAA----------------T-G-A-T-A---TTT-TC-A-CT-A-GTG------AAAA-T-A-AC-AA
gi|31425 : ATTTATT-A-CGATTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--T--TC-A----T-CCA-C--TGAAT----A-AAA-A-------------TG-A-T-A-A-T-TTT----A-CT-A-GTG------AAAA-T-A-AC-
gi|31426 : TTTATT-A-CATTTT--CAG-C-A---GTG----A-C-AT-TTTT-AAA--T--TT-A----C-CCG-T--TGAATCAGTA-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAATG--TT-ATT
gi|31427 : TTTATT-A-CATTTT--CAG-G-A---GTG----A-A-AT-ATTG-AGG--T--TT-A----T-CCG-T--TAAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC-AA
gi|31428 : TTTATT-A-CATTT---CAG-C-A---GTG----A-AGAT-A-TG-AAT--T--TT-A----T-CCG-T--TGAAT----T-AGA-A-------------TT-G-T-T-A-T-TTT-TC-A-C--ATATG-CT--AATGA-T-A-AC-
gi|31429 : TTTATT-A-CATTTT--CAG-C-A---GTG----A----T-ATTG-AAA--T--TT-AAATGT-CCG-T--TGAATTAG-A-AAA-T-------------TTTG-TGT-A-T-TTT-TC-A-CATA-GTG--G--AAAAA-T---AC-AAAAGTG--TT-ATT
gi|31430 : TTTATT---CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCC-G--TGAAT------GAA-T-------------TT-G-T-TAA-T-TTT-TCAA-C--A-GTG-TGA-AAAAA-G-A-AC-AAGTGTT--TT-ATT
gi|31431 : TTTATT-A-CATTCT---AG-C-A---GTG----A-A--T-ATTGGAAA--TA-TC-AACG-T-TTG-T--TGAGT----A-AAA-T-------------TT-G-T-T-A-T-TTTTTC-A-C--A-GTG-TG--AAAAA-T-A-CC-AAAAGTG--TT-ATT
gi|31432 : TTTATT-A-CATTTT--CAA-C-A---GTG----A-A-AT-ACTA-AAA--T--AT-A----T-CCA-T--TGAAT----A-AAA-A-------------TT-G-A-T-G-T-TT-------C--A-GT--------AAA-T-A-AC---TAGTG--TT-ATT
gi|31433 : TTTATT-AACATTTTG-CAGTC-A---GTG----ATA-AT-ATTGTAAA--T--TT--------CCG-A--TATAT----A-GCA-T-------------TT-----T-A-T-TTT-TC-A-C--A-GTG-TG---ACAA-T-A-AC-AACAGTGTATT-ATT
gi|31434 : TTCATC-A-TATTCT--CAA-C-A---GTA----A-A-AT-ATTG-TAT--T--TC-A----T-CCG-T--CGAAT----A-AAA---------------TC-G-A-T-A---TTT-TC-A-CT-A-GTG------AAAA-T-------AAAGTG--TT-
gi|31435 : TTTATT-A-CATTTT--CAA-C-A---ATG----A-A-AT-CCAG-AAA--A--TT-A----T-CGA-T--TGAAT----A-AAA-A-------------TT-A-A-T-A---TTT-TC-A-C--A-G
gi|31436 : TTATT-A-CATTTT--TAGGC-A---GTG----A-ATAT-ATTG-AAAATT--TT-A----T-CCG-T--TGAGT----A-AAA-T-------------TT-G-T-T-A-T-TT-------C--A-GTG-TG--AAAAA-T---AC--AAAGTG--TT-ATT
gi|31437 : TTATT---CATTTTTACAG-C-A---GTG----A-A-A--ATTG-AAA--T--TT-A----T-CAG-TGATGAAT----A-GAA-T-------------TT-G-T-T-A-T-TTT-TC-G-C--A--TG-TG--AAAAA-T-A-AC-ATAAG-G--TTGATT
gi|31438 : TTATT-A-TATATT--TAA-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCA-T--TAAAT----ACAAA-TTGATATTTCACCGTT-G-T-T-A---TTT-TC-A-C--A-GTG-TG---AAAA-T-A-A
gi|31439 : T-A-CATTTTT-CAG-CGA---GTGTGTAG-A-AT-ATTG-AAA--TGGTG-AG---T-CAG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A-G-T-------------GTG-TG--AAAAA-T-A-AC-AAAAGT---TT-ATT
blockSeqs : T A TA T A AAG TGTA G G T A AT GG C AATG C T GA CAGT T TTGATATTTCACCG T C G A CT T A C AT T TGCTA G G T A TA G
blockSeqs : . . G G A . . T T . G . C . ACG . . . TAG C TGAA . . . . TT . . . T . CTGA . . . A . .
blockSeqs : . . T . G . . . . . T . A . T . . . . . TT . . . . TA . . . T . TGAA . . . . . .
blockSeqs : . . . . . . . . . . . . . . T . . . . . T . . . . T . . . T . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . G . . . . . T . . . . T . . . T . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . CTA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . A . . . . T . . . . . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TGA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TG . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . A . . . . T . . . . . TG . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TG . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TG . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . A . . . . T . . . . . GA . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TG . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . A . . . . T . . . . . GA . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . T . . . . . TG . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . G . . . . . TG . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqCons : T**
originalCons : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
finalCons : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-AAA-T-------------TT-G-T-T-AT--TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
Alignments
lowQualScore : 111111111111111
lowQualScore : 1 1 44 2 3 222 2222 2 2 1 3 11 44 1 8888 1 1 11 5555 2 111111111111111 1 1 1 1 555 1 1 1 66 1 999999 1 1 1 2 22 1
lowQualScore : . . .. . . ... .... . . . . .. .. . .... . . .. .... . ............... . . . . ... . . . .. . ...... . . . . .. .
lowQualScore : 3 3 44 6 9 333 7777 6 6 3 9 88 44 3 9999 3 3 88 0000 6 333333333333333 3 3 3 3 999 3 3 3 99 3 777777 3 3 3 8 55 9
consensus : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
Reference ( family-611 ) : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31409 : ATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A---TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31410 : tATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTA-AAA--T--GT-T----T-CTG-T--TGAAT----A-GAA-T-------------TT-A-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31411 : tATTTATT-A-CATTTT--CAG-C-A---GT-----A-A-AT-ATTG-AAA--T--TC-A----T-CTG-T--TGAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31412 : tTTTATT-A-CATTTT--CAG-C-A---TTG----A-A-AA-ATTG-AAA--T--TT-T----A-CCG-T--TAAAT----A-AAA-T-------------TT-A-A-T-A-T-TTT-TA-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31413 : tgTTTATTTA-CATCTT--CAG-C-A---GTG----G-A-ATTATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A---TTT-TC-A-T--A-GTG-TG---AAAA-T-A-ACAAAAAGTG--TT-ATT
gi|31414 : tgTTTATT-A-CATTTT--TAG-C-A---GTG----A-A-AT-ATTGAAAA--T--TT-A----T-CC--T--TGAGT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-T---AAAAA-T-ATTC-AAAAGTG--TT-ATT
gi|31415 : tgTTTATT-A-CATTTT--CAG-CAA---GTG------A-AT-ATTG-AAA--A--TT-AT---T-CCG-T--TGAAT----A-AA----------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC---AAGTG--TT-ATT
gi|31416 : tgTTTATT-A-CATTTT--CAG-CAA---GTG------A-AT-ATTG-AAA--A--TT-AT---T-CCG-T--TGAAT----A-AA----------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC---AAGTG--TT-ATT
gi|31417 : tgATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAT--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-TTA-TGCTAATGA-T-A-AC-
gi|31418 : tATT-A-CATTTT--TAG-C-G---GTG----A-A-AT-ATTG-AAC--T--TT-A----TCCCG-T--TGAGT----A-AAA-T-------------CT-GCC-T-ACT-TTT-CC-A-C--A-GTG-TG--AAAAA-T-A-CCAAAAAGTG--TT-ATT
gi|31419 : tattacATTTATT-A-CATTTT--CAA-C-C---GTG----G-A-AT-ACTG-TAT--TC-TT-A----T-CCA-T--TGAAT----G-AAA-TGAA----------TA-G----------TT-TC-A-CT-A-GTG------AAAA-T-A-AC-AA
gi|31420 : tATTTATT-A-CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAGTG--TT-ATT
gi|31421 : ATTTATT-A-CATTTT--CAG-C-A---GTG----AGA-AT-ATTG-AAA--T--TTCA----T-CCGTT--TGAAT----A-GAATT-------------TT-G-T-T-ATT-TTT-TC-A-C--A-GTG--G--AAAAA-T-A-AC-AAAAGTG--TT-AT
gi|31422 : ATTTATT-A-CATTT---CAG-C-AAAGGTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCG-T--TGGGT----G-AAT-T-------------CT-G-T-T-T-T-TTT-TC-ACC--A-GTGCTG--AAAAAGT-A-TC-AAAAGTG--T
gi|31423 : ATTTATT-A-CATTTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--A--TC-A----T-CCA-T--TGAAT----A-AAA------------------A-T-T-A-TATTT-TC-A-C----TTG-TG--AAAAG-TGA-AC-AA
gi|31424 : ATTTATC-A-AATTTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--T--TT-A----T-CCA-T--TGAAT----ATGAA----------------T-G-A-T-A---TTT-TC-A-CT-A-GTG------AAAA-T-A-AC-AA
gi|31425 : ATTTATT-A-CGATTT--CAA-C-A---GTG----A-A-AT-ACTG-TAT--T--TC-A----T-CCA-C--TGAAT----A-AAA-A-------------TG-A-T-A-A-T-TTT----A-CT-A-GTG------AAAA-T-A-AC-
gi|31426 : TTTATT-A-CATTTT--CAG-C-A---GTG----A-C-AT-TTTT-AAA--T--TT-A----C-CCG-T--TGAATCAGTA-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG--AAAAA-T-A-AC-AAAAATG--TT-ATT
gi|31427 : TTTATT-A-CATTTT--CAG-G-A---GTG----A-A-AT-ATTG-AGG--T--TT-A----T-CCG-T--TAAAT----A-AAA-T-------------TT-G-T-T-A-T-TTT-TC-A-C--A-GTG-TG---AAAA-T-A-AC-AA
gi|31428 : TTTATT-A-CATTT---CAG-C-A---GTG----A-AGAT-A-TG-AAT--T--TT-A----T-CCG-T--TGAAT----T-AGA-A-------------TT-G-T-T-A-T-TTT-TC-A-C--ATATG-CT--AATGA-T-A-AC-
gi|31429 : TTTATT-A-CATTTT--CAG-C-A---GTG----A----T-ATTG-AAA--T--TT-AAATGT-CCG-T--TGAATTAG-A-AAA-T-------------TTTG-TGT-A-T-TTT-TC-A-CATA-GTG--G--AAAAA-T---AC-AAAAGTG--TT-ATT
gi|31430 : TTTATT---CATTTT--CAG-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCC-G--TGAAT------GAA-T-------------TT-G-T-TAA-T-TTT-TCAA-C--A-GTG-TGA-AAAAA-G-A-AC-AAGTGTT--TT-ATT
gi|31431 : TTTATT-A-CATTCT---AG-C-A---GTG----A-A--T-ATTGGAAA--TA-TC-AACG-T-TTG-T--TGAGT----A-AAA-T-------------TT-G-T-T-A-T-TTTTTC-A-C--A-GTG-TG--AAAAA-T-A-CC-AAAAGTG--TT-ATT
gi|31432 : TTTATT-A-CATTTT--CAA-C-A---GTG----A-A-AT-ACTA-AAA--T--AT-A----T-CCA-T--TGAAT----A-AAA-A-------------TT-G-A-T-G-T-TT-------C--A-GT--------AAA-T-A-AC---TAGTG--TT-ATT
gi|31433 : TTTATT-AACATTTTG-CAGTC-A---GTG----ATA-AT-ATTGTAAA--T--TT--------CCG-A--TATAT----A-GCA-T-------------TT-----T-A-T-TTT-TC-A-C--A-GTG-TG---ACAA-T-A-AC-AACAGTGTATT-ATT
gi|31434 : TTCATC-A-TATTCT--CAA-C-A---GTA----A-A-AT-ATTG-TAT--T--TC-A----T-CCG-T--CGAAT----A-AAA---------------TC-G-A-T-A---TTT-TC-A-CT-A-GTG------AAAA-T-------AAAGTG--TT-
gi|31435 : TTTATT-A-CATTTT--CAA-C-A---ATG----A-A-AT-CCAG-AAA--A--TT-A----T-CGA-T--TGAAT----A-AAA-A-------------TT-A-A-T-A---TTT-TC-A-C--A-G
gi|31436 : TTATT-A-CATTTT--TAGGC-A---GTG----A-ATAT-ATTG-AAAATT--TT-A----T-CCG-T--TGAGT----A-AAA-T-------------TT-G-T-T-A-T-TT-------C--A-GTG-TG--AAAAA-T---AC--AAAGTG--TT-ATT
gi|31437 : TTATT---CATTTTTACAG-C-A---GTG----A-A-A--ATTG-AAA--T--TT-A----T-CAG-TGATGAAT----A-GAA-T-------------TT-G-T-T-A-T-TTT-TC-G-C--A--TG-TG--AAAAA-T-A-AC-ATAAG-G--TTGATT
gi|31438 : TTATT-A-TATATT--TAA-C-A---GTG----A-A-AT-ATTG-AAA--T--TT-A----T-CCA-T--TAAAT----ACAAA-TTGATATTTCACCGTT-G-T-T-A---TTT-TC-A-C--A-GTG-TG---AAAA-T-A-A
gi|31439 : T-A-CATTTTT-CAG-CGA---GTGTGTAG-A-AT-ATTG-AAA--TGGTG-AG---T-CAG-T--TGAAT----A-GAA-T-------------TT-G-T-T-A-G-T-------------GTG-TG--AAAAA-T-A-AC-AAAAGT---TT-ATT