lowQualScore                  :                                 1111                                                                         1                
lowQualScore                  :                                 7777                                   11       5555 5555 2222               0          1     
lowQualScore                  :                                 ....                                   ..       .... .... ....               .          .     
lowQualScore                  :                                 0000                                   77       2222 2222 6666               8          3     
consensus                     :                      AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
Reference ( gi|34912 )        :                      AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCCTAATGGATCT-AGAAA
gi|34911                      :                      AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCCTAATGGATCT-AGAAA
gi|34923                      :                      AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----TATAGA----ACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34922                      :                      AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----TATAGA----ACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34916                      :                      AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34915                      :                      AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34914                      :                      AGTTTTGACTA----ACCAGTCTTTGAATCATAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34913                      :                      AGTTTTGACTA----ACCAGTCTTTGAATCATAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34921                      :                      AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGACTATAT----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34920                      :                      AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGACTATAT----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34929                      :                      AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACAAATCTTTGAATCGTAATGGATCTAAGAAA
gi|34928                      :                      AGTTTAGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAA
gi|34925                      :                      AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34919                      :                      AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34918                      :                      AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34917                      :                      AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34927                      :                      AGTTTTGACTATATAACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTAGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34926                      :                      AGTTTTGACTATATAACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTAGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34930                      :                      AGTTTAGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----A-CAATCTTTGAATCATACTGGATCT-AGAAA
gi|34931                      :                      AGGTTTGACTA----ACCAATCTTTGAATCGTAACGGATCTAGAAATGAGTTTTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAA
gi|34924                      :                      AGCTTTGACTA----ACTAGTCTTTGAATCCTAACGGATCTAGAAATGAG--GTTTGAC----T----A----ACCAATCTTTGAATCGTAACGGATCT-AGAAA
gi|34909                      :                      AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34908                      :                      AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34907                      :                      AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34932                      :                      AGTTTTGACTA----ACCAATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34910                      :                      AGTGTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACTAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34933                      :                      AGTTTTGACTA----AC-AATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34935                      :                      AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAA
gi|34937                      : ccagtaacggatctagaaatgAGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAA
gi|34936                      :          gatctagaaatgAGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAA
gi|34934                      :            gatctagaaatgTTTTGACTA----ACCAATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34935                      :                                                    GTAACGGATCTAGAAATGAG--TTTTGAC----T----ATAGAACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34937                      :                                                       ccaGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34936                      :                                                          GATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34932                      :                                                                      AG--TTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAA
gi|34933                      :                                                                      AG--TTTTGAC----T----A----AC-AATCTTTGAATCATACTGGATCT-AGAAAagagttttgactaaccagtctttgaatc
gi|34934                      :                                                                        --TTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAAagagttttgactaaccagtctttgaatc





Alignments
lowQualScore                  :            1111                                                                                          
lowQualScore                  :            5555                                   11       5555 5555 2222                          1     
lowQualScore                  :            ....                                   ..       .... .... ....                          .     
lowQualScore                  :            2222                                   88       5555 5555 7777                          4     
consensus                     : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
Reference ( family-603 )      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34907                      : AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34908                      : AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34909                      : AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34910                      : AGTGTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACTAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34911                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCCTAATGGATCT-AGAAA
gi|34912                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCCTAATGGATCT-AGAAA
gi|34913                      : AGTTTTGACTA----ACCAGTCTTTGAATCATAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34914                      : AGTTTTGACTA----ACCAGTCTTTGAATCATAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34915                      : AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34916                      : AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34917                      : AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34918                      : AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34919                      : AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34920                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGACTATAT----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34921                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGACTATAT----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34922                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----TATAGA----ACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34923                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----TATAGA----ACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34924                      : AGCTTTGACTA----ACTAGTCTTTGAATCCTAACGGATCTAGAAATGAG--GTTTGAC----T----A----ACCAATCTTTGAATCGTAACGGATCT-AGAAA
gi|34925                      : AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34926                      : AGTTTTGACTATATAACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTAGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34927                      : AGTTTTGACTATATAACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTAGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34928                      : AGTTTAGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAA
gi|34929                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACAAATCTTTGAATCGTAATGGATCTAAGAAA
gi|34930                      : AGTTTAGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----A-CAATCTTTGAATCATACTGGATCT-AGAAA
gi|34931                      : AGGTTTGACTA----ACCAATCTTTGAATCGTAACGGATCTAGAAATGAGTTTTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAA
gi|34932                      : AGTTTTGACTA----ACCAATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34933                      : AGTTTTGACTA----AC-AATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34934                      :   TTTTGACTA----ACCAATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34935                      :                               GTAACGGATCTAGAAATGAG--TTTTGAC----T----ATAGAACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34936                      :                                  ccaGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34937                      :                                     GATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA





Alignments
lowQualScore                  :            1111                                                                                          
lowQualScore                  :            5555                                   11       5555 5555 2222                          1     
lowQualScore                  :            ....                                   ..       .... .... ....                          .     
lowQualScore                  :            2222                                   88       5555 5555 7777                          4     
consensus                     : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
Reference ( family-603 )      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34907                      : AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34908                      : AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34909                      : AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34910                      : AGTGTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACTAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34911                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCCTAATGGATCT-AGAAA
gi|34912                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCCTAATGGATCT-AGAAA
gi|34913                      : AGTTTTGACTA----ACCAGTCTTTGAATCATAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34914                      : AGTTTTGACTA----ACCAGTCTTTGAATCATAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34915                      : AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34916                      : AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34917                      : AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34918                      : AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34919                      : AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34920                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGACTATAT----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34921                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGACTATAT----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34922                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----TATAGA----ACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34923                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----TATAGA----ACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34924                      : AGCTTTGACTA----ACTAGTCTTTGAATCCTAACGGATCTAGAAATGAG--GTTTGAC----T----A----ACCAATCTTTGAATCGTAACGGATCT-AGAAA
gi|34925                      : AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34926                      : AGTTTTGACTATATAACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTAGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34927                      : AGTTTTGACTATATAACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTAGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34928                      : AGTTTAGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAA
gi|34929                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACAAATCTTTGAATCGTAATGGATCTAAGAAA
gi|34930                      : AGTTTAGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----A-CAATCTTTGAATCATACTGGATCT-AGAAA
gi|34931                      : AGGTTTGACTA----ACCAATCTTTGAATCGTAACGGATCTAGAAATGAGTTTTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAA
gi|34932                      : AGTTTTGACTA----ACCAATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34933                      : AGTTTTGACTA----AC-AATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34934                      :   TTTTGACTA----ACCAATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34935                      :                               GTAACGGATCTAGAAATGAG--TTTTGAC----T----ATAGAACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34936                      :                                  ccaGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34937                      :                                     GATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA


blockSeqs                     :            TAGA                                   TT       TATA ATAG TAGA                          A
blockSeqs                     :            TAGA                                   .        TATA ATAG .                             .
blockSeqs                     :            TAGA                                   .        .    .    .                             .
blockSeqs                     :            TATA                                   .        .    .    .                             .
blockSeqs                     :            TATA                                   .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :            .                                      .        .    .    .                             .
blockSeqs                     :                                                   .        .    .    .                              
blockSeqs                     :                                                   .        .    .    .                              
blockSeqs                     :                                                   .        .    .    .                              


blockSeqCons                  : 
originalCons                  : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
finalCons                     : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA





Alignments
lowQualScore                  :            1111                                                                                          
lowQualScore                  :            5555                                   11       5555 5555 2222                          1     
lowQualScore                  :            ....                                   ..       .... .... ....                          .     
lowQualScore                  :            2222                                   88       5555 5555 7777                          4     
consensus                     : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
Reference ( family-603 )      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34907                      : AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34908                      : AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34909                      : AGTTTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACCAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34910                      : AGTGTTGACTA----ACCAGTCATTGA-----------TCTAGAAATGAG--CTTTGAC----T----A----ACTAGTCTTTGAATCCTAACGGATCT-AGAAA
gi|34911                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCCTAATGGATCT-AGAAA
gi|34912                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCCTAATGGATCT-AGAAA
gi|34913                      : AGTTTTGACTA----ACCAGTCTTTGAATCATAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34914                      : AGTTTTGACTA----ACCAGTCTTTGAATCATAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34915                      : AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34916                      : AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34917                      : AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34918                      : AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34919                      : AGTTTTGACTATAGAACCAGTCTTTGAATCGTAATGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34920                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGACTATAT----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34921                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGACTATAT----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34922                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----TATAGA----ACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34923                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----TATAGA----ACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34924                      : AGCTTTGACTA----ACTAGTCTTTGAATCCTAACGGATCTAGAAATGAG--GTTTGAC----T----A----ACCAATCTTTGAATCGTAACGGATCT-AGAAA
gi|34925                      : AGCTTTGACTA----ACCAGTCTTTGAATCCTAACGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCATAATGGATCT-AGAAA
gi|34926                      : AGTTTTGACTATATAACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTAGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34927                      : AGTTTTGACTATATAACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTAGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34928                      : AGTTTAGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAA
gi|34929                      : AGTTTTGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----ACAAATCTTTGAATCGTAATGGATCTAAGAAA
gi|34930                      : AGTTTAGACTA----ACCAGTCTTTGAATCGTAACGGATCTAGAAATGAG--TTTTGAC----T----A----A-CAATCTTTGAATCATACTGGATCT-AGAAA
gi|34931                      : AGGTTTGACTA----ACCAATCTTTGAATCGTAACGGATCTAGAAATGAGTTTTTTGAC----T----A----ACCAATCTTTGAATCATACTGGATCT-AGAAA
gi|34932                      : AGTTTTGACTA----ACCAATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34933                      : AGTTTTGACTA----AC-AATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34934                      :   TTTTGACTA----ACCAATCTTTGAATCATACTGGATCTAGAAAAGAG--TTTTGAC----T----A----ACCAGTCTTTGAATC
gi|34935                      :                               GTAACGGATCTAGAAATGAG--TTTTGAC----T----ATAGAACCAGTCTTTGAATCGTAATGGATCT-AGAAA
gi|34936                      :                                  ccaGATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA
gi|34937                      :                                     GATCTAGAAATGAG--TTTTGAC----T----A----ACCAGTCTTTGAATCGTAACGGATCT-AGAAA