lowQualScore : 11
lowQualScore : 1 0 11 0 44 0 11 0 555 0 88 0 0 0 0 222 0 888 0 00 0 2222 11 0 0 111 0 0 22 0 11 1 55
lowQualScore : . . .. . .. . .. . ... . .. . . . . ... . ... . .. . .... .. . . ... . . .. . .. . ..
lowQualScore : 9 9 33 9 66 9 33 9 222 7 66 6 6 6 6 222 6 888 6 88 6 2222 11 8 8 444 8 8 11 8 11 8 66
consensus : GGAA-A-A--T-CATATTC--CC-CGAG-GGCGA-CGCC-CNNGGG-GA-AT-A-T---G-A---T-TTT--T-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TCCCCCGNACTGC
Reference ( gi|19563 ) : GGAA-A-A--T-CATATTC--CC-CAAG-GGCAA-CGCC-CGAGGG-GA-AT-A-T---G-A---T-TTT--T-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TTCCCCGAACTGC
gi|19566 : GGAA-A-A--T-CATATTC--CC-CGAG-GGCAA-CGCC-CGAGGG-GA-AT-A-T---G-A---T-TAT--T-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TTCCCAGAACTGC
gi|19569 : GAAA-A-A--T-CATATTT--CC-CGAG-GGTAA-CGCC-CGAGGG-GA-AT-A-T---G-A---T-TTT--T-C----TA--G-GTT-GAA---T-AAA-TC-ATCAT-A--TCCCCC
gi|19569 : GAAA-A-A--T-CATATTC--CC-CTCG-GGCGT-TACC-CTCGGG-AA-AT-A-T---G-A---T-TTT--T-C----
gi|19564 : GAAA-A-A--T-CATACTC--CC-CTCG-GGCGT-TGCC-CTCGGG-GA-AT-A-T---G-AA--T-TTT--T-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TCCCCCGAACTGCtaggttgaataaatcatcatatccccc
gi|19562 : GAAA-A-A--T-CATATTC--CC-CTCG-GGCGT-TGCC-CTTGGG-GA-AT-A-T---G-A---T-TTT--C-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TCCCCCTCACTGCc
gi|19562 : GGAA-A-A--T-CATATTC--CC-CAAG-GGCAA-CGCC-CGAGGG-GA-AT-A-T---G-A---T-TTT--T-C----c
gi|19603 : GAAA-A-A--T-CATATTC--CC-CGAG-Gtaggctgaataaatcttcatatccccctcactgcc
gi|19565 : GGAA-A-A--T-CATATTC--CC-CGAG-GGCAA-CGCC-CGAGGG-GA-AT-A-T---G-A---T-TAT--T-C----taggctgaataaatcttcatatcccccgaactgc
gi|19571 : GAAA-A-A--T-CATAT-------CGGG-GGCAA-CGCT-CGAGGG-GA-AT-A-T---G-A---C-TTT--C-CTA--TA--G-ACT-GAA---T-AAA-TC-ATCAT-A--TCCTCCttggcttaataaatcttcatatccccctcattacc
gi|19571 : GGAA-A-G--T-CATATTC--CC-CTCG-AGCGT-TGCC-CCCG------AT-A-T---G-A---T-TTT--T-C----
gi|19567 : GGAA-A-A--T-CATATTC--CC-CGAG-GGCAA-CGCC----------------------------------------TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TTCCCCGAACTACtatagactgaataaatcatcatatcctcc
gi|19570 : GGAA-A-G--T-CATATTC--CC-CTCG-AGCGT-TGCC-CCCG------AT-A-T---G-A---T-TTT--T-C----CA--A-ACT-GAA---T-AAA-TC-TTCAT-A--TCCACCGAACTGC
gi|19570 : GAAA-A-A--T-CATAT-------CGGG-GGCAA-CGCT-CGAGGG-GA-AT-A-T---G-A---C-TTT--C-C----c
gi|19568 : GAAA-A-A--T-CATATTC--CC-CTCG-GGCGT-TACC-CTCGGG-AA-AT-A-T---G-A---T-TTT--T-C----TA--G-GCT-GAA---T-AAA-TA-TTTAT-A--Tcaaactgaataaatcttcatatccaccgaactgcc
gi|19568 : GAAA-A-A--T-CATATTT--CC-CGAG-GGTAA-CGCC-CGAGGG-GA-AT-A-T---G-A---T-TTT--T-C----
gi|19585 : GGAA-A-A--T-CATATTC--CC-CGAG-GGCAA-CGCC-TAGGCT-GA-AT-A-taggctgaataaatatttatat
gi|19593 : GGAA-A-A--T-CATATTC--CC-CGAG-GGCAA-Ctaggctgaataaatcttcatatccccctcactgcc
gi|19587 : GAAA-A-A--T-CATATTC--CC-TGAG-GGCAA-CGCtaggctgaataaatcttcatatcaccctcactgcc
gi|19573 : GGAA-A-A--C-CATATCC--CC-CGAG-GACAA--GCT-CCAGGG-GA-AT-A-T---A-C---T-TTT--T-C----ttagctgaataaatcttaatatctccctcactgcc
gi|19573 : GAAA-A-A--G-TATATTC--CC-CTGG-AGCT--TGTC-CTCGGG-GG-AT-A-T---G-G---T-TTT--C-C----TT--G-AGT-TAA---C-AAA-TC-TTTGT----TTCCCttgagttaacaaatctttgtttccctc
gi|19574 : GAAA-A-A--T-CATATTC--CC-T------TAA----------GG-GA-AT-A-T---G-A---T-ATT--T-C----TT--G-GGT-GAA---T-AAA-TA-TCCAT-A--TCTCCCtc
gi|19582 : GGAA-A-A----AATAT----CC-CGAC-GGCAA-CGCC-CGA-GG-GA-TT-G-T---GCA---T-TTT--tcac
gi|19566 : GAATA-A--T-CATATTC--CC-CTCG-GGCGT-TGCC-CTCGGG-GA-AT-A-T---G-A---T-TTT--C-C----tacgctgaataaatcttcatacccgcctcactgcc
gi|19564 : GAA-A-AATT-CATATTC--CC-CGAG-GGCAA-CGCC-CGAGGG-GA-GT-A-T---G-A---T-TTT--T-C----taggctgaataaatcttcatattcccagaactgc
gi|19565 : GAATA-A--T-CATATTC--CC-CTCG-GGCGT-TGCC-CTCGGG-GA-AT-A-T---G-A---T-TTT--C-C----TT--G-GCT-TAA---T-AAA-TC-TTCAT-A--TCCCCCtaggctgaataaatcttcatatcccccgaactgcc
gi|19567 : GAA-G-A--T-T-TATTCAGCC-TA---GGCGT-TGCC-CTCGGG-GA-AT-A-T---G-A---T-TTT--C-C----tcattacc
gi|19577 : GAA-A-A--T-CAATTTC--CC-CGAG-GGCAA-CGCC-CGAGGG-GA-AT-A-T---G-A---T-TTT--T-atattccccgaactac
gi|19579 : GAA-G-A--T-T-TATTCAGCC-TA----GAAA-TGCC-CTTGGT-GA-AT-A-T---G-A---T-TTT--T-ttggtgaataaatcttcatcatctccctcac
gi|19580 : GAA-A-A--T-T-TATTC--CC-CGAT-GGCAA-AGTC-CGAGGG-GA-AT-A-T---G-A---G-TTT--T-atatccccctcactacc
gi|19574 : GAA-ATA--T-CATATTC--CC-T------TAA----------GG-GA-AT-A-T---G-A---T-TTT--T-C----atatctcctcactgcc
gi|19583 : AA-A-A--T-T-TATTC--CC-CGAT-GGCAA-AGTC-CGAGGG-GA-AT-A-T---G-AG--T-TTT--T-A----T---G-GCT-GAA---C-AAA-TC-TTCAT-A--TCCCCTGAACTACttgggtgaataaatatccatatctccctcac
gi|19581 : AA-A-A--T-CAATTTC--CC-CGAG-GGCAA-CGCC-CGAGGG-GA-AT-A-T---G-AT--T-TTT--T-C----TT--G-AGT-GAA---T-AGA-TC-TCCAT-A--TCTCCCc
gi|19581 : AA-A-A--T-CATATTC--CC-CTCG-GGCGT-TGCC-CTCGGG-GA-AA-T-T---G-A---T-TTT--
gi|19578 : AA-A-A--T-CATATTC--CC-GGAA-GACAT-CGAT-GGAGGG-GA-AT-A-A---A-A---C-TTT--T-C----TA--G-GCT-GAA---T-AAA-TC-GTCAT-G--Tttcttgagtgaatagatctccatatctccc
gi|19577 : aAA-A-A--T-CATATTC--CC-CTCG-GGCGT-TGCC-CTCGGG-GA-AA-T-T---G-A-----TTT--T-C----TT--G-G-T-GAA---T-AAA-TC-TTCATCA--TCTCCCcacc
gi|19586 : aAA-A-A--T-CATATTC--CA-CGAG-GGCAA-CGCCTCTTGGGTGA-AT-A-tcac
gi|19599 : AA-A-A--T-CATATTC--AC-CAAG-GGCAtgttgggtgaataaatcttcatatccccctcatt
gi|19579 : AA-A-A--T-CATATTC--AC-CAAG-GGCA-----------------------------------TT--T-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TCCCCCTCACTACttctaagctaaataattcatcatatcccccgaactg
gi|19582 : aAA-A-A--TGCACAATC--CCTC--G-GGCGT-TGCC--GTCGG-GA--T-A-T---T-----T-TTT--C-C----TA--C-GCT-GAA---T-AAA-TC-TTCAT-A--CCCGCCTCACTGCc
gi|19575 : AA-A-A--T-CATATTC--CC-TATA-TGCAG-CATA-TGAGGG-GA-ATAA-T---T-A---T-TTT--T-C----c
gi|19572 : AA-A-A--T-CATATTC--CC-GGAA-GACAT-CGAT-GGAGGG-GA-AT-A-A---A-A---C-TTT--T-C----tgttggaggaatacatctccatatctccctcatt
gi|19594 : AA-A-A--T-CATACTC--CC-CATG-GGCAA-Ctttaggcggaagaaatctacatatcccctcactgcc
gi|19584 : AA-T-A--T-CATGTCC--CC-CGAG-GGCAATCACC-GGAGGG-GG-AC-A-T---T-A---T-ttttggggggaatgaattttcaaatctcccttact
gi|19585 : TATTCAGCC-TA---GGCGT-TGCC-CTCGGG-GA-AT-A-T---G-A---T-TTT--C-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TCCCCCTCACTGCactgggtgggacaaagctccatgtctccctc
gi|19586 : TATTCA-CC-CAAGAGGCGT-TGCC-CTCGTG-GA-AT-A-T---G-A---T-TTT--T-G----TT--G-GGT-GAA---T-AAA-TC-TTCAT-A--TCCCCCc
gi|19589 : -GGCAA-TG-----AGGG-GA-AT-A-TGAAG-A---T-TTA--T-T----CA--G-CCT-AAA---A-GAA-----CCAT-A--CTCCTCGAtcatt
gi|19588 : cattgcccGCAC-CGTC-CT-GAG-GA-AT-AAT---G-G---T-TCT--T-T----TA--A-GCT-GAA---T-AAA-TC-TCCAT-A--TCCCTC--ATTGC
gi|19593 : GCC-CTCGGG-GA-AT-A-T---G-A---T-TTT--C-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TCACCCTCACTGCc
gi|19589 : gttGCC-CTCGAG-GA-GT-A-T---G-G---T-TCT--T-T----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TTCCCCTCATTGCc
gi|19599 : cattGCC-CTTGGT-GA-AT-A-T---G-A---T-TTT--TTC----TA--A-GCT-AAA---T-AAT-TC-ATCAT-A--TCCCCCGAACTGc
gi|19587 : tGCC-CTCAGG-GA-AT-A-T---G-A---T-TTT--T-C----TT--A-GCT-GAA---T-AAA-TC-TTAAT-A--TCTCCCTCACTGC
gi|19591 : gcgttGTC-CACGAG-GA-AT-A-T---G-G---T-TCT--T-T----TA--G-GCT-GAA---T-AAATTC-TCCAT-A--TCCCCCTCATTGCc
gi|19595 : cattGCC-CTCGAG-GA-AT-A-TT--G-G---C-TCT--T------TA--G-GCT-GAA---T-AAA-CCTTTCAT-A--CCCCCC
gi|19594 : ttGCC-CATGGG-GA-GT-A-T---G-A---TTTTT--T-T----TG--G-GGG-GAA---T-GAA-TT-TTCAA-A--TCTCCCtcattg
gi|19600 : gttGCC-CTCGGG-GG-AT-A-T---G-C---T-TTT--T-T----TTTTG-G-T-GAA---T-AAA-TC-TCTAT-A--TCTCCCttact
gi|19602 : tGCC-CTCGGG-TA-AA-A-T---T-A---T-TTT--T-C----TT--G-AGT-GAA---T-AAA-TC-GCCAT-A--TCTCCCtca
gi|19597 : GCC-TGCGAG-GA-AT-A-T---T-G---T-TGT--T-CATTTTA--ACGTT-GAA---TTGAA-TC-TTCAT-A--TCCCCCTCATTGCtcact
gi|19601 : ttGCC-CCCGTG-GA-AT-A-T---G-A---T-TTA--T-C----TT--G-AGT-GAA---T-AGA-T--TTCAT-ACCTTCCc
gi|19604 : tCC-CAAGA---A-AT-A-T---G-G---T-TTT--T-C----TT--G-GGT-GAA---T-AAA-TC-TCCAT-A--TCTCCCTCACTACttact
gi|19590 : CT-CGAGG-----AT-A-T---G-G---T-TCT--C-T----TA--C-GTT-GAA---T-AAA-TC-TTCAT-A----CCCCG
gi|19576 : cgttgccCT-CGAGGT----AT-A-T---G-G---C-TTTCTT-T----TA--G-GCT-GCA---T-AAA-TC-TCCAT-A--TCCCCCcctcattgcc
gi|19562 : gaaacatcacgttttacttgaagaccattgttcGAGGG-GG-AT-A-T---G-AAGAT-TTA--T-T----CA--G-CCT-AGG---A-AAA-TC----AT-A--TTCCCCAAcgtcattgcc
gi|19565 : gaaaaatcatattcccctcgggcgttgcccGAGGG-GG-AT-A-T---G-AAGAT-TTA--T------TA--A-GCC-AAG---G-AAA-A---TCAT-A--TTCCCCGAactgcc
gi|19585 : gaataatcatattcccctcgggcgttgcccGAGGG-GG-AT-A-T---G-AAGAT-TTA--T-T----CA--G-CCT-AGG---A-AAA-TC----AT-A--TTCCCCGAattacc
gi|19593 : tattcagcctaggcgttgcccGAGGG-TG-AT-A-T---G-AAGAT-TTA--T-T----CA--G-CCT-AGG---A-AAA-TC----AT-A--TTCCCCGAactgcc
gi|19572 : gttgcccGAGGG-GATAT-G-TA--G-A---T-TTC--T-T----CC--G-CCT-AAA---A-AAA-TC----AT-A--TTCCCGGAactgcc
gi|19564 : gaaaagttttattcccctccatcgatgtcGGG-GG-AT-A-T---G-AAGAT-TTA--T-T----CA--G-CCT-AGA---A-AAA-T---TCAT-A--TTCCCCGAactgcc
gi|19603 : gaaaaatcatactcccctcgggcgttgcccGGG-GA-AT-A-T---G-A---T-TTT--T-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TCCCCCGAACTGCgaactgcc
gi|19603 : cctcGGG-GG-AT-A-T---G-AAGAT-TTA--T-T----CA--G-CCT-AGA---A-AAA-TC----AT-A--TTCCCCGA
gi|19605 : ccGGA-GA-AT-A-T---G-G---T-TTT--T-C----TA--G-GCT-GAA---T-AAA-TC-TCCAT-G--TCCCCCgaactgc
gi|19566 : GG-GA-AT-A-T---G-AAGAT-TTA--T-T----CA--G-CCTAGAA---T-AA------TCAT-A--TTCCCC
gi|19592 : ggaaaatcatattccccgagggcaacgcccgaGA-GG-AT-A-T---G-G---T-TCT--T-T----TA--G-GCT-GAA---T-AAT-CC-TTCAT-A--TCCTCCagaactgc
gi|19596 : cattgccactG-GA-AT-A-T---G-G---T-TCT--T-T----TA--C-GTT-GAGAATT-GAA-TC-TTCAT-A--TCCCCCTCATTGCctatgcc
gi|19598 : ttgcctctgcca-GA-AC-A-T---G-G---T-TCT--T-T----TA--G-GCT-GAA---T-AAA-----TCAT-A--TCCCTCTCATTGCc
gi|19606 : tgccctcgatA-AT-T-T---G-A---T-TTT--T-C----TA--G-GCT-GAA---T-AAA-TC-ATCAT-A--TCCCTCc
gi|19607 : -AT-A-T---T-A---T-TTT--T-C----TA--G-GCT-GAA---T-AAA-TC-TTCAT-A--TCCCCCTCACTGC
Alignments
lowQualScore : 1111 11
lowQualScore : 1 1 1 1 55 1 1111 33 0 0 0 1 0 11 0 3333 22 0 111 0 0 0 0 0 22
lowQualScore : . . . . .. . .... .. . . . . . .. . .... .. . ... . . . . . ..
lowQualScore : 7 7 6 6 77 5 9999 33 9 8 9 7 9 22 9 1111 22 9 666 9 9 9 9 9 44
consensus : GGAA-AAT-CATATTC-CC-CGAG-GGCGN-C-GCCCTCGGGG-AATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CCTCACTGC
Reference ( family-434 ) : GGAA-AAT-CATATTC-CC-CGAG-GGCGA-C-GCCCNNGGGG-AATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CCGNACTGC
gi|19562 : GAAA-AAT-CATATTC-CC-CTCG-GGCGT-T-GCCCTTGGGG-AATA-T-GA-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CCTCACTGC
gi|19563 : GGAA-AAT-CATATTC-CC-CAAG-GGCAA-C-GCCCGAGGGG-AATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CCGAACTGCc
gi|19564 : GAAA-AAT-CATACTC-CC-CTCG-GGCGT-T-GCCCTCGGGG-AATA-T-GAAT-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CCGAACTGC
gi|19565 : GAATAAT-CATATTC-CC-CTCG-GGCGT-T-GCCCTCGGGG-AATA-T-GA-T-TTT--C-C----TT--G-GCTTAA---T-AAA-TC-TTCAT-ATCCC-CCc
gi|19566 : GGAA-AAT-CATATTC-CC-CGAG-GGCAA-C-GCCCGAGGGG-AATA-T-GA-T-TAT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CAGAACTGCtcattacc
gi|19567 : GGAA-AAT-CATATTC-CC-CGAG-GGCAA-C-GCC--------------------------------TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CCGAACTAC
gi|19568 : GAAA-AAT-CATATTC-CC-CTCG-GGCGT-T-ACCCTCGGGA-AATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TA-TTTAT-AT
gi|19569 : GAAA-AAT-CATATTT-CC-CGAG-GGTAA-C-GCCCGAGGGG-AATA-T-GA-T-TTT--T-C----TA--G-GTTGAA---T-AAA-TC-ATCAT-ATCCC-CC
gi|19570 : GGAA-AGT-CATATTC-CC-CTCG-AGCGT-T-GCCCCCG-----ATA-T-GA-T-TTT--T-C----CA--A-ACTGAA---T-AAA-TC-TTCAT-ATCCA-CCGAACTGC
gi|19571 : GAAA-AAT-CATAT------CGGG-GGCAA-C-GCTCGAGGGG-AATA-T-GA-C-TTT--C-CTA--TA--G-ACTGAA---T-AAA-TC-ATCAT-ATCCT-CCc
gi|19572 : GAAA-AGT-TTTATTC-CC-CTCC-ATCGA-T-GTCTTCCGGG-AATA-T-GA-T-TTT--T-T----TA--G-GCGGAA---G-AAA-TC-TACAT-ATCCC-CT-CACTGC
gi|19573 : GGAA-AAC-CATATCC-CC-CGAG-GACAA---GCTCCAGGGG-AATA-T-AC-T-TTT--T-C----c
gi|19573 : GAAA-AAG-TATATTC-CC-CTGG-AGCT--T-GTCCTCGGGG-GATA-T-GG-T-TTT--C-C----TT--G-AGTTAA---C-AAA-TC-TTTGT-TTCCC-TCttgagttaacaaatctttgtttccctc
gi|19574 : GAAA-AAT-CATATTC-CC-T----------------TAAGGG-AATA-T-GA-T-ATT--T-C----TT--G-GGTGAA---T-AAA-TA-TCCAT-ATCTC-CCTCAC
gi|19576 : CCTCGAGG-TATA-T-GG-C-TTTCTT-T----TA--G-GCTGCA---T-AAA-TC-TCCAT-ATCCC-CC
gi|19577 : gaaacatcacgttttacttgaagaccattgttAA-AAT-CATATTC-CC-CTCG-GGCGT-T-GCCCTCGGGG-AAAT-T-GA---TTT--T-C----TT--G-G-TGAA---T-AAA-TC-TTCATCATCTC-CCTCACcgtcattgcc
gi|19578 : aAA-AAT-CATATTC-CC-GGAA-GACAT-C-GATGGAGGGG-AATA-A-AA-C-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-GTCAT-GTCAC-C
gi|19579 : aAA-AAT-CATATTC-AC-CAAG-GGCA----------------------------TT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CCTCACTAC
gi|19580 : aGAA-AAT-T-TATTC-CC-CGAT-GGCAA-A-GTCCGAGGGG-AATA-T-GA-G-TTT--T-c
gi|19580 : GAA---T-AAA-TT-TTCAT-ATCTC-CT-CACTGCatatctcctcactgcc
gi|19581 : aaaactcatattcccctcggactttgccatcgggAA-AAT-CAATTTC-CC-CGAG-GGCAA-C-GCCCGAGGGG-AATA-T-GATT-TTT--T-C----TT--G-AGTGAA---T-AGA-TC-TCCAT-ATCTC-CCc
gi|19582 : AA-AATGCACAATC-CCTCG---GGCGT-T-GCCGTCGGG---ATA-T-T--T-TTT--C-C----TA--C-GCTGAA---T-AAA-TC-TTCAT-ACCCG-CCTCACTGC
gi|19583 : AA-AAT-T-TATTC-CC-CGAT-GGCAA-A-GTCCGAGGGG-AATA-T-GA-G-TTT--T------TAT-G-GCTGAA---C-AAA-TC-TTCAT-ATCCC-CTGAACTACc
gi|19584 : AA-TAT-CATGTCC-CC-CGAG-GGCAATC-ACCGGAGGGG-GACA-T-TA-T-c
gi|19584 : AT-AATGTCC-CC-CTCC-GGTGA-TTGCCCTCGGGGG-ACA-T-GA-T-ATT--A-C----TG--G-GTGGGA---C-AAA-GC-TCCAT-GTCTC-CCactgggtgggacaaagctccatgtctccctc
gi|19585 : GGAA-AAT-CATATTC-CC-CGAG-GGCAA-C-GCCTAGGCTG-AATA-tc
gi|19585 : -GGCGT-T-GCCCTCGGGG-AATA-T-GA-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CCTCACTGCtaggctgaataaatcttcatatccccctcactgcc
gi|19586 : tattcagcctaTATTCACC-CAAGAGGCGT-T-GCCCTCGTGG-AATA-T-GA-T-TTT--T-G----TT--G-GGTGAA---T-AAA-TC-TTCAT-ATCCC-CCc
gi|19587 : GCGT-T-GCCCTCAGGG-AATA-T-GA-T-TTT--T-C----TT--A-GCTGAA---T-AAA-TC-TTAAT-ATCTC-CCTCACTGCtcatt
gi|19588 : CCTGAGG-AATAAT-GG-T-TCT--T-T----TA--A-GCTGAA---T-AAA-TC-TCCAT-ATCCC-TC--ATTGCc
gi|19589 : gcaccgt-GCCCTCGAGG-AGTA-T-GG-T-TCT--T-T----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CCTCATTGCc
gi|19590 : catt-GCCCTCGAGG-A-TA-T-GG-T-TCT--C-T----TA--C-GTTGAA---T-AAA-TC-TTCAT-ACCCCGCCTCATTGCc
gi|19591 : cgtt-GTCCACGAGG-AATA-T-GG-T-TCT--T-T----TA--G-GCTGAA---T-AAATTC-TCCAT-ATCCC-CCTCATTGCc
gi|19592 : catt-GCCACTGAGG-A-TA-T-GG-T-TCT--T-T----TA--G-GCTGAA---T-AAT-CC-TTCAT-ATCCT-CC
gi|19593 : catt-GCCCTCGGGG-AATA-T-GA-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCAC-CCTCACTGCctatgcc
gi|19594 : gtt-GCCCATGGGG-AGTA-T-GA-TTTTT--T-T----TG--G-GGGGAA---T-GAA-TT-TTCAA-ATCTC-CCTTACTc
gi|19595 : gtt-GCCCTCGAGG-AATA-TTGG-C-TCT--T------TA--G-GCTGAA---T-AAA-CCTTTCAT-ACCCC-CCTCATTG
gi|19596 : ttGG-AATA-T-GG-T-TCT--T-T----TA--C-GTTGAGAATT-GAA-TC-TTCAT-ATCCC-CCTCATTGC
gi|19597 : ttgcctctgcca-GCCTGCGAGG-AATA-T-TG-T-TGT--T-CATTTTA--ACGTTGAA---TTGAA-TC-TTCAT-ATCCC-CCTCATTGCc
gi|19598 : tt-GCCCTCGATG-AACA-T-GG-T-TCT--T-T----TA--G-GCTGAA---T-AAA-----TCAT-ATCCC-TCTCATTGCc
gi|19599 : t-GCCCTTGGTG-AATA-T-GA-T-TTT--TTC----TA--A-GCTAAA---T-AAT-TC-ATCAT-ATCCC-CCGAACTGc
gi|19600 : t-GCCCTCGGGG-GATA-T-GC-T-TTT--T-T----TTTTG-G-TGAA---T-AAA-TC-TCTAT-ATCTC-CC
gi|19601 : t-GCCCCCGTGG-AATA-T-GA-T-TTA--T-C----TT--G-AGTGAA---T-AGA-T--TTCAT-ACCTT-CCTTACTtca
gi|19602 : t-GCCCTCGGGT-AAAA-T-TA-T-TTT--T-C----TT--G-AGTGAA---T-AAA-TC-GCCAT-ATCTC-CCTCACT
gi|19603 : CCTCGGGG-AATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CCGAACTGC
gi|19604 : GA-AATA-T-GG-T-TTT--T-C----TT--G-GGTGAA---T-AAA-TC-TCCAT-ATCTC-CCTCACTAC
gi|19605 : cccaaGGAG-AATA-T-GG-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TCCAT-GTCCC-CC
gi|19606 : -AATT-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-ATCAT-ATCCC-TC
gi|19607 : ATA-T-TA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CCTCACTGC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|19575 ): GAAAAATAATTATTCCCCTCATATGCTGCATATAGGGAATATGATTTTTGTTGGAGGAATACATCTCCATATCTCCCTCATT
Alignments
lowQualScore : 1 1 1 1 77 1 666 0 0 0 1 0 11 0 1111 33 0 111 0 0 0 0 0 11
lowQualScore : . . . . .. . ... . . . . . .. . .... .. . ... . . . . . ..
lowQualScore : 9 8 7 7 99 7 777 4 9 9 7 9 22 9 9999 33 9 666 9 9 9 9 9 33
consensus : GGAA-AAT-CATATTC-CC-CNNG-GGCGTC-GCCCTCGGGGAATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
Reference ( family-434 ) : GGAA-AAT-CATATTC-CC-CGAG-GGCGNC-GCCCTCGGGGAATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19562 : GAAA-AAT-CATATTC-CC-CTCG-GGCGTT-GCCCTTGGGGAATA-T-GA-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19563 : GGAA-AAT-CATATTC-CC-CAAG-GGCAAC-GCCCGAGGGGAATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTGCc
gi|19564 : GAAA-AAT-CATACTC-CC-CTCG-GGCGTT-GCCCTCGGGGAATA-T-GAAT-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19565 : GAATAAT-CATATTC-CC-CTCG-GGCGTT-GCCCTCGGGGAATA-T-GA-T-TTT--C-C----TT--G-GCTTAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTACc
gi|19566 : GGAA-AAT-CATATTC-CC-CGAG-GGCAAC-GCCCGAGGGGAATA-T-GA-T-TAT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CA--GAACTGCc
gi|19567 : GGAA-AAT-CATATTC-CC-CGAG-GGCAAC-GCC-------------------------------TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTAC
gi|19568 : GAAA-AAT-CATATTC-CC-CTCG-GGCGTT-ACCCTCGGGAAATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TA-TTTAT-AT
gi|19569 : GAAA-AAT-CATATTT-CC-CGAG-GGTAAC-GCCCGAGGGGAATA-T-GA-T-TTT--T-C----TA--G-GTTGAA---T-AAA-TC-ATCAT-ATCCC-CC--
gi|19570 : GGAA-AGT-CATATTC-CC-CTCG-AGCGTT-GCCCCCG----ATA-T-GA-T-TTT--T-C----CA--A-ACTGAA---T-AAA-TC-TTCAT-ATCCA-CC--GAACTGC
gi|19571 : GAAA-AAT-CATAT------CGGG-GGCAAC-GCTCGAGGGGAATA-T-GA-C-TTT--C-C----TATAG-ACTGAA---T-AAA-TC-ATCAT-ATCCT-CC--c
gi|19572 : GAAA-AGT-TTTATTC-CC-CTCC-ATCGAT-GTCTTCCGGGAATA-T-GA-T-TTT--T-T----TA--G-GCGGAA---G-AAA-TC-TACAT-AT-CC-CC--TCACTGC
gi|19573 : GAAA-AAG-TATATTC-CC-CTGG-AGC-TT-GTCCTCGGGGGATA-T-GG-T-TTT--C-C----TT--G-AGTTAA---C-AAA-TC-TTTGT-TTCCC-TC--c
gi|19574 : GAAA-AAT-CATATTC-CC-TTAA-GG--------------GAATA-T-GA-T-ATT--T-C----TT--G-GGTGAA---T-AAA-TA-TCCAT-ATCTC-CC--TCAC
gi|19576 : CCTCGAGGTATA-T-GG-C-TTTCTT-T----TA--G-GCTGCA---T-AAA-TC-TCCAT-ATCCC-CCCGTCATTGC
gi|19577 : gaaacatcacgttttacttgaagaccattgttAA-AAT-CATATTC-CC-CTCG-GGCGTT-GCCCTCGGGGAAAT-T-GA---TTT--T-C----TT--G-G-TGAA---T-AAA-TC-TTCATCATCTC-CC--TCACc
gi|19578 : aAA-AAT-CATATTC-CC-GGAA-GACATC-GATGGAGGGGAATA-A-AA-C-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-GTCAT-GTCAC-C
gi|19579 : aAA-AAT-CATATTC-AC-CAAG-GGCA--------------------------TT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTAC
gi|19580 : aGAA-AAT-T-TATTC-CC-CGAT-GGCAAA-GTCCGAGGGGAATA-T-GA-G-TTT--T-c
gi|19580 : AA-ACT-CATATTC-CC-CTCG-GACTTT-GCCATCGGG----------------------------------GAA---T-AAA-TT-TTCAT-AT-CT-CC--TCACTGCatatctcctcactgcc
gi|19581 : aAA-AAT-CAATTTC-CC-CGAG-GGCAAC-GCCCGAGGGGAATA-T-GATT-TTT--T-C----TT--G-AGTGAA---T-AGA-TC-TCCAT-ATCTC-CC--c
gi|19582 : AA-AATGCACAATC-CCTCG---GGCGTT-GCCGTCGGG--ATA-T-T--T-TTT--C-C----TA--C-GCTGAA---T-AAA-TC-TTCAT-ACCCG-CC--TCACTGC
gi|19583 : AA-AAT-T-TATTC-CC-CGAT-GGCAAA-GTCCGAGGGGAATA-T-GA-G-TTT--T------TAT-G-GCTGAA---C-AAA-TC-TTCAT-ATCCC-Cc
gi|19584 : AT-AATGTCC-CC-CTCC-GGTGATTGCCCTCGGGGGACA-T-GA-T-ATT--A-C----TG--G-GTGGGA---C-AAA-GC-TCCAT-GTCTC-CC--TCtgaactacc
gi|19585 : -GGCGTT-GCCCTCGGGGAATA-T-GA-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19586 : tattcagcctaTATTCACC-CAAGAGGCGTT-GCCCTCGTGGAATA-T-GA-T-TTT--T-G----TT--G-GGTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTc
gi|19587 : GCGTT-GCCCTCAGGGAATA-T-GA-T-TTT--T-C----TT--A-GCTGAA---T-AAA-TC-TTAAT-ATCTC-CC--TCACTGC
gi|19588 : GCACC-GTCCT-GAGGAATAAT-GG-T-TCT--T-T----TA--A-GCTGAA---T-AAA-TC-TCCAT-AT--C-CC--TCATTGCc
gi|19589 : -GCCCTCGAGGAGTA-T-GG-T-TCT--T-T----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--TCATTGCc
gi|19590 : cattCGTT-GCCCTCGAGGA-TA-T-GG-T-TCT--C-T----TA--C-GTTGAA---T-AAA-TC-TTCAT-ACCCCGCC--TCATTGCc
gi|19591 : -GTCCACGAGGAATA-T-GG-T-TCT--T-T----TA--G-GCTGAA---T-AAATTC-TCCAT-ATCCC-CC--TCATTGCc
gi|19592 : cattGAGGATA-T-GG-T-TCT--T-T----TA--G-GCTGAA---T-AAT-CC-TTCAT-ATCCT-CC--CTA-TGC
gi|19593 : cattgccactGTT-GCCCTCGGGGAATA-T-GA-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCAC-CC--TCACTGCc
gi|19594 : GTT-GCCCATGGGGAGTA-T-GA-TTTTT--T-T----TG--G-GGGGAA---T-GAA-TT-TTCAA-ATCTC-CC--TTACTc
gi|19595 : -GCCCTCGAGGAATA-TTGG-C-TCT--T------TA--G-GCTGAA---T-AAA-CCTTTCAT-ACCCC-CC--TCATTG
gi|19596 : ttGGAATA-T-GG-T-TCT--T-T----TA--C-GTTGAGAATT-GAA-TC-TTCAT-ATCCC-CC--TCATTGC
gi|19597 : ttgcctctgcca-GCCTGCGAGGAATA-T-TG-T-TGT--T-CATTTTA--ACGTTGAA---TTGAA-TC-TTCAT-ATCCC-CC--TCATTGCc
gi|19598 : tt-GCCCTCGATGAACA-T-GG-T-TCT--T-T----TA--G-GCTGAA---T-AAA-----TCAT-ATCCC-TC--TCATTGCc
gi|19599 : t-GCCCTTGGTGAATA-T-GA-T-TTT--TTC----TA--A-GCTAAA---T-AAT-TC-ATCAT-ATCCC-CC--GAACTGc
gi|19600 : t-GCCCTCGGGGGATA-T-GC-T-TTT--T-T----TTTTG-G-TGAA---T-AAA-TC-TCTAT-ATCTC-CC--TCA
gi|19601 : t-GCCCCCGTGGAATA-T-GA-T-TTA--T-C----TT--G-AGTGAA---T-AGA-T--TTCAT-ACCTT-CC--TTACT
gi|19602 : t-GCCCTCGGGTAAAA-T-TA-T-TTT--T-C----TT--G-AGTGAA---T-AAA-TC-GCCAT-ATCTC-CC--TCACT
gi|19603 : CCTCGGGGAATA-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19604 : CCCAAGAAATA-T-GG-T-TTT--T-C----TT--G-GGTGAA---T-AAA-TC-TCCAT-ATCTC-CC--TCACTAC
gi|19605 : GGAGAATA-T-GG-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TCCAT-GTCCC-CC--
gi|19606 : AATT-T-GA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-ATCAT-ATCCC-TC--
gi|19607 : ATA-T-TA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|19575 ): GAAAAATAATTATTCCCCTCATATGCTGCATATAGGGAATATGATTTTTGTTGGAGGAATACATCTCCATATCTCCCTCATT
Alignments
lowQualScore : 2 1 1 22 1 1 3 0 0 0 0 0 0 11 0 1111 33 0 111 0 0 0 0 0 11
lowQualScore : . . . .. . . . . . . . . . .. . .... .. . ... . . . . . ..
lowQualScore : 0 9 7 00 7 2 7 2 9 9 9 9 9 22 9 9999 33 9 666 9 9 9 9 9 33
consensus : GAAA-AAT-CATATTC-CCCNNG-GGCG-TTGCCCTCGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
Reference ( family-434 ) : GGAA-AAT-CATATTC-CCCNNG-GGCG-TCGCCCTCGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19562 : GAAA-AAT-CATATTC-CCCTCG-GGCG-TTGCCCTTGGGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19563 : GGAA-AAT-CATATTC-CCCAAG-GGCA-ACGCCCGAGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTGCc
gi|19564 : GAAA-AAT-CATACTC-CCCTCG-GGCG-TTGCCCTCGGGGAATA-T-GAA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19565 : GAATAAT-CATATTC-CCCTCG-GGCG-TTGCCCTCGGGGAATA-T-G-A-T-TTT--C-C----TT--G-GCTTAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTACc
gi|19566 : GGAA-AAT-CATATTC-CCCGAG-GGCA-ACGCCCGAGGGGAATA-T-G-A-T-TAT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CA--GAACTGCc
gi|19567 : GGAA-AAT-CATATTC-CCCGAG-GGCA-ACGCC--------------------------------TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTAC
gi|19568 : GAAA-AAT-CATATTC-CCCTCG-GGCG-TTACCCTCGGGAAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TA-TTTAT-AT
gi|19569 : GAAA-AAT-CATATTT-CCCGAG-GGTA-ACGCCCGAGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GTTGAA---T-AAA-TC-ATCAT-ATCCC-CC--
gi|19570 : GGAA-AGT-CATATTC-CCCTCG-AGCG-TTGCCCCCG----ATA-T-G-A-T-TTT--T-C----CA--A-ACTGAA---T-AAA-TC-TTCAT-ATCCA-CC--GAACTGC
gi|19571 : GAAA-AAT-CATAT-----CGGG-GGCA-ACGCTCGAGGGGAATA-T-G-A-C-TTT--C-C----TATAG-ACTGAA---T-AAA-TC-ATCAT-ATCCT-CC--c
gi|19572 : GAAA-AGT-TTTATTC-CCCTCC-ATCG-ATGTCTTCCGGGAATA-T-G-A-T-TTT--T-T----TA--G-GCGGAA---G-AAA-TC-TACAT-AT-CC-CC--TCACTGC
gi|19573 : GAAA-AAG-TATATTC-CCCTGG-AGC--TTGTCCTCGGGGGATA-T-G-G-T-TTT--C-C----TT--G-AGTTAA---C-AAA-TC-TTTGT-TTCCC-TC--c
gi|19574 : GAAA-AAT-CATATTC-CCTTAA-GG--------------GAATA-T-G-A-T-ATT--T-C----TT--G-GGTGAA---T-AAA-TA-TCCAT-ATCTC-CC--TCAC
gi|19576 : CCTCGAGGTATA-T-G-G-C-TTTCTT-T----TA--G-GCTGCA---T-AAA-TC-TCCAT-ATCCC-CCCGTCATTGC
gi|19577 : gaaacatcacgttttacttgaagaccattgttAA-AAT-CATATTC-CCCTCG-GGCG-TTGCCCTCGGGGAAAT-T-G-A---TTT--T-C----TT--G-G-TGAA---T-AAA-TC-TTCATCATCTC-CC--TCACc
gi|19578 : aAA-AAT-CATATTC-CCGGAA-GACA-TCGATGGAGGGGAATA-A-A-A-C-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-GTCAT-GTCAC-C
gi|19579 : aAA-AAT-CATATTC-ACCAAG-GGCA-T--------------------------T--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTAC
gi|19580 : aAA-ACT-CATATTC-CCCTCG-GACT-TTGCCATCGGG-----------------------------------GAA---T-AAA-TT-TTCAT-AT-CT-CC--TCACTGCc
gi|19581 : aAA-AAT-CAATTTC-CCCGAG-GGCA-ACGCCCGAGGGGAATA-T-G-ATT-TTT--T-C----TT--G-AGTGAA---T-AGA-TC-TCCAT-ATCTC-CC--c
gi|19582 : AA-AATGCACAATC-CC-TCG-GGCG-TTGCCGTCGGG--ATA-T-T---T-TTT--C-C----TA--C-GCTGAA---T-AAA-TC-TTCAT-ACCCG-CC--TCACTGC
gi|19583 : AA-AAT-T-TATTC-CCCGAT-GGCA-AAGTCCGAGGGGAATA-T-G-A-G-TTT--T------TAT-G-GCTGAA---C-AAA-TC-TTCAT-ATCCC-Cc
gi|19584 : AT-AATGTCC-CCCTCC-GGTGATTGCCCTCGGGGGACA-T-G-A-T-ATT--A-C----TG--G-GTGGGA---C-AAA-GC-TCCAT-GTCTC-CC--TCtgaactacc
gi|19585 : TATTC-AGCCTA-GGCG-TTGCCCTCGGGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19586 : TATTCACCCAAGAGGCG-TTGCCCTCGTGGAATA-T-G-A-T-TTT--T-G----TT--G-GGTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTc
gi|19587 : GCG-TTGCCCTCAGGGAATA-T-G-A-T-TTT--T-C----TT--A-GCTGAA---T-AAA-TC-TTAAT-ATCTC-CC--TCACTGC
gi|19588 : GCA-CCGTCCT-GAGGAATAAT-G-G-T-TCT--T-T----TA--A-GCTGAA---T-AAA-TC-TCCAT-AT--C-CC--TCATTGCc
gi|19589 : CA-TTGCCCTCGAGGAGTA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--TCATTGCc
gi|19590 : CG-TTGCCCTCGAGGA-TA-T-G-G-T-TCT--C-T----TA--C-GTTGAA---T-AAA-TC-TTCAT-ACCCCGCC--TCATTGCc
gi|19591 : CA-TTGTCCACGAGGAATA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAATTC-TCCAT-ATCCC-CC--TCATTGCc
gi|19592 : CA-TTGCCACTGAGGA-TA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAT-CC-TTCAT-ATCCT-CC--CTA-TGC
gi|19593 : G-TTGCCCTCGGGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCAC-CC--TCACTGCc
gi|19594 : G-TTGCCCATGGGGAGTA-T-G-A-TTTTT--T-T----TG--G-GGGGAA---T-GAA-TT-TTCAA-ATCTC-CC--TTACTc
gi|19595 : -TTGCCCTCGAGGAATA-TTG-G-C-TCT--T------TA--G-GCTGAA---T-AAA-CCTTTCAT-ACCCC-CC--TCATTG
gi|19596 : GGAATA-T-G-G-T-TCT--T-T----TA--C-GTTGAGAATT-GAA-TC-TTCAT-ATCCC-CC--TCATTGC
gi|19597 : ttgcctctgcca-TTGCCTGCGAGGAATA-T-T-G-T-TGT--T-CATTTTA--ACGTTGAA---TTGAA-TC-TTCAT-ATCCC-CC--TCATTGCc
gi|19598 : GCCCTCGATGAACA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-----TCAT-ATCCC-TC--TCATTGCc
gi|19599 : tGCCCTTGGTGAATA-T-G-A-T-TTT--TTC----TA--A-GCTAAA---T-AAT-TC-ATCAT-ATCCC-CC--GAACTGc
gi|19600 : tGCCCTCGGGGGATA-T-G-C-T-TTT--T-T----TTTTG-G-TGAA---T-AAA-TC-TCTAT-ATCTC-CC--TCA
gi|19601 : tGCCCCCGTGGAATA-T-G-A-T-TTA--T-C----TT--G-AGTGAA---T-AGA-T--TTCAT-ACCTT-CC--TTACT
gi|19602 : tGCCCTCGGGTAAAA-T-T-A-T-TTT--T-C----TT--G-AGTGAA---T-AAA-TC-GCCAT-ATCTC-CC--TCACT
gi|19603 : CCTCGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19604 : CCCAAGAAATA-T-G-G-T-TTT--T-C----TT--G-GGTGAA---T-AAA-TC-TCCAT-ATCTC-CC--TCACTAC
gi|19605 : GGAGAATA-T-G-G-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TCCAT-GTCCC-CC--
gi|19606 : AATT-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-ATCAT-ATCCC-TC--
gi|19607 : ATA-T-T-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|19575 ): GAAAAATAATTATTCCCCTCATATGCTGCATATAGGGAATATGATTTTTGTTGGAGGAATACATCTCCATATCTCCCTCATT
Alignments
lowQualScore : 1 1 1 22 1 222 1 1 0 0 0 0 0 0 0 11 0 1111 33 0 111 0 0 0 0 0 11
lowQualScore : . . . .. . ... . . . . . . . . . .. . .... .. . ... . . . . . ..
lowQualScore : 7 6 6 00 6 333 1 0 9 9 9 9 9 9 9 22 9 9999 33 9 666 9 9 9 9 9 33
consensus : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
Reference ( family-434 ) : GAAAAAT-CAT-ATTC-CCCNNG-GG---CG-TTGC-C-CT-CGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19562 : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-TGGGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19563 : GGAAAAT-CAT-ATTC-CCCAAG-GG---CA-ACGC-C-CG-AGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTGCc
gi|19564 : GAAAAAT-CAT-ACTC-CCCTCG-GG---CG-TTGC-C-CT-CGGGGAATA-T-GAA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19565 : GAATAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CGGGGAATA-T-G-A-T-TTT--C-C----TT--G-GCTTAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTACc
gi|19566 : GGAAAAT-CAT-ATTC-CCCGAG-GG---CA-ACGC-C-CG-AGGGGAATA-T-G-A-T-TAT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CA--GAACTGCc
gi|19567 : GGAAAAT-CAT-ATTC-CCCGAG-GG---CA-ACGC-C----------------------------------TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTAC
gi|19568 : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTAC-C-CT-CGGGAAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TA-TTTAT-AT
gi|19569 : GAAAAAT-CAT-ATTT-CCCGAG-GG---TA-ACGC-C-CG-AGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GTTGAA---T-AAA-TC-ATCAT-ATCCC-CC--
gi|19570 : GGAAAGT-CAT-ATTC-CCCTCG-AG---CG-TTGC-C-CC-CG----ATA-T-G-A-T-TTT--T-C----CA--A-ACTGAA---T-AAA-TC-TTCAT-ATCCA-CC--GAACTGC
gi|19571 : GAAAAAT-CAT-AT-----CGGG-GG---CA-ACGC-T-CG-AGGGGAATA-T-G-A-C-TTT--C-C----TATAG-ACTGAA---T-AAA-TC-ATCAT-ATCCT-CC--c
gi|19572 : GAAAAGT-TTT-ATTC-CCCTCC-AT---CG-ATGT-C-TT-CCGGGAATA-T-G-A-T-TTT--T-T----TA--G-GCGGAA---G-AAA-TC-TACAT-AT-CC-CC--TCACTGC
gi|19573 : GAAAAAG-TAT-ATTC-CCCTGG-AG---C--TTGT-C-CT-CGGGGGATA-T-G-G-T-TTT--C-C----TT--G-AGTTAA---C-AAA-TC-TTTGT-TTCCC-TC--c
gi|19574 : GAAAAAT-CAT-ATTC-CCTTAA-GG--------------------GAATA-T-G-A-T-ATT--T-C----TT--G-GGTGAA---T-AAA-TA-TCCAT-ATCTC-CC--TCAC
gi|19575 : GAAAAAT-AATTATTC-CCCTCA-TA---TG-CTGC-A-TA-TAGGGAATA-T-G-A-T-TTT--T-G----TT--G-GAGGAA---T-ACA-TC-TCCAT-ATCTC-CC--TCATT
gi|19576 : GAAACAT-CAC-GTTT-TACTTG-AAGACCA-TTGTTC-CT-CGAGGTATA-T-G-G-C-TTTCTT-T----TA--G-GCTGCA---T-AAA-TC-TCCAT-ATCCC-CCCGTCATTGC
gi|19577 : AAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CGGGGAAAT-T-G-A---TTT--T-C----TT--G-G-TGAA---T-AAA-TC-TTCATCATCTC-CC--TCACc
gi|19578 : GAAAAGT-TTT-ATTC-CCCTCC-AT---CG-ATGT-C-TT-CCGGGAATA-T-G-A-T-TTT--T-
gi|19579 : AAAAAT-CAT-ATTC-ACCAAG-GG---CA-TT-------------------------------T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTACtaggctgaataaatcgtcatgtcacc
gi|19580 : AAAACT-CAT-ATTC-CCCTCG-GA---CT-TTGC-C-AT-CGGG-----------------------------------GAA---T-AAA-TT-TTCAT-AT-CT-CC--TCACTGCc
gi|19581 : AAAAT-CAA-TTTC-CCCGAG-GG---CA-ACGC-C-CG-AGGGGAATA-T-G-ATT-TTT--T-C----TT--G-AGTGAA---T-AGA-TC-TCCAT-ATCTC-CC--c
gi|19582 : AAAATGCAC-AATC-CC-TCG-GG---CG-TTGC-C-GT-CGGG--ATA-T-T---T-TTT--C-C----TA--C-GCTGAA---T-AAA-TC-TTCAT-ACCCG-CC--TCACTGC
gi|19583 : AAAAT-T-T-ATTC-CCCGAT-GG---CA-AAGT-C-CG-AGGGGAATA-T-G-A-G-TTT--T------TAT-G-GCTGAA---C-AAA-TC-TTCAT-ATCCC-Cc
gi|19584 : AT-AAT-GTCC-CCCTCC-GG---TGATTGC-C-CT-CGGGGGACA-T-G-A-T-ATT--A-C----TG--G-GTGGGA---C-AAA-GC-TCCAT-GTCTC-CC--TCtgaactacc
gi|19585 : T-ATTC-AGCCTA-GG---CG-TTGC-C-CT-CGGGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19586 : T-ATTCACCCAAGAGG---CG-TTGC-C-CT-CGTGGAATA-T-G-A-T-TTT--T-G----TT--G-GGTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTc
gi|19587 : G---CG-TTGC-C-CT-CAGGGAATA-T-G-A-T-TTT--T-C----TT--A-GCTGAA---T-AAA-TC-TTAAT-ATCTC-CC--TCACTGC
gi|19588 : G---CA-CCGT-C-CT--GAGGAATAAT-G-G-T-TCT--T-T----TA--A-GCTGAA---T-AAA-TC-TCCAT-AT--C-CC--TCATTGCc
gi|19589 : ---CA-TTGC-C-CT-CGAGGAGTA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--TCATTGCc
gi|19590 : ---CG-TTGC-C-CT-CGAGGA-TA-T-G-G-T-TCT--C-T----TA--C-GTTGAA---T-AAA-TC-TTCAT-ACCCCGCC--TCATTGCc
gi|19591 : ---CA-TTGT-C-CA-CGAGGAATA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAATTC-TCCAT-ATCCC-CC--TCATTGCc
gi|19592 : ---CA-TTGC-C-AC-TGAGGA-TA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAT-CC-TTCAT-ATCCT-CC--CTA-TGC
gi|19593 : G-TTGC-C-CT-CGGGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCAC-CC--TCACTGCc
gi|19594 : G-TTGC-C-CA-TGGGGAGTA-T-G-A-TTTTT--T-T----TG--G-GGGGAA---T-GAA-TT-TTCAA-ATCTC-CC--TTACTc
gi|19595 : -TTGC-C-CT-CGAGGAATA-TTG-G-C-TCT--T------TA--G-GCTGAA---T-AAA-CCTTTCAT-ACCCC-CC--TCATTG
gi|19596 : -TTGC-CTCTGCCAGGAATA-T-G-G-T-TCT--T-T----TA--C-GTTGAGAATT-GAA-TC-TTCAT-ATCCC-CC--TCATTGC
gi|19597 : -TTGC-C-TG-CGAGGAATA-T-T-G-T-TGT--T-CATTTTA--ACGTTGAA---TTGAA-TC-TTCAT-ATCCC-CC--TCATTGCc
gi|19598 : TGC-C-CT-CGATGAACA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-----TCAT-ATCCC-TC--TCATTGCc
gi|19599 : TGC-C-CT-TGGTGAATA-T-G-A-T-TTT--TTC----TA--A-GCTAAA---T-AAT-TC-ATCAT-ATCCC-CC--GAACTGc
gi|19600 : TGC-C-CT-CGGGGGATA-T-G-C-T-TTT--T-T----TTTTG-G-TGAA---T-AAA-TC-TCTAT-ATCTC-CC--TCA
gi|19601 : TGC-C-CC-CGTGGAATA-T-G-A-T-TTA--T-C----TT--G-AGTGAA---T-AGA-T--TTCAT-ACCTT-CC--TTACT
gi|19602 : GC-C-CT-CGGGTAAAA-T-T-A-T-TTT--T-C----TT--G-AGTGAA---T-AAA-TC-GCCAT-ATCTC-CC--TCACT
gi|19603 : -C-CT-CGGGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19604 : -CC-CAAGAAATA-T-G-G-T-TTT--T-C----TT--G-GGTGAA---T-AAA-TC-TCCAT-ATCTC-CC--TCACTAC
gi|19605 : GGAGAATA-T-G-G-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TCCAT-GTCCC-CC--
gi|19606 : AATT-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-ATCAT-ATCCC-TC--
gi|19607 : ATA-T-T-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
Alignments
lowQualScore : 1 1 1 11 1 222 1 0 0 0 11 0 0 0 0 0 11 0 1111 33 0 111 0 0 0 0 0 11
lowQualScore : . . . .. . ... . . . . .. . . . . . .. . .... .. . ... . . . . . ..
lowQualScore : 7 5 5 99 5 222 1 9 9 9 22 9 9 9 9 9 22 9 9999 33 9 666 9 9 9 9 9 33
consensus : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
Reference ( family-434 ) : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19562 : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-TG--GGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19563 : GGAAAAT-CAT-ATTC-CCCAAG-GG---CA-ACGC-C-CG-AG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTGCc
gi|19564 : GAAAAAT-CAT-ACTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-GAA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19565 : GAATAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--C-C----TT--G-GCTTAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTACc
gi|19566 : GGAAAAT-CAT-ATTC-CCCGAG-GG---CA-ACGC-C-CG-AG--GGGAATA-T-G-A-T-TAT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CA--GAACTGCc
gi|19567 : GGAAAAT-CAT-ATTC-CCCGAG-GG---CA-ACGC-C------------------------------------TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTAC
gi|19568 : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTAC-C-CT-CG--GGAAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TA-TTTAT-AT
gi|19569 : GAAAAAT-CAT-ATTT-CCCGAG-GG---TA-ACGC-C-CG-AG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GTTGAA---T-AAA-TC-ATCAT-ATCCC-CC--
gi|19570 : GGAAAGT-CAT-ATTC-CCCTCG-AG---CG-TTGC-C-CC-CG------ATA-T-G-A-T-TTT--T-C----CA--A-ACTGAA---T-AAA-TC-TTCAT-ATCCA-CC--GAACTGC
gi|19571 : GAAAAAT-CAT-AT-------CG-GG---GG-CAAC-G-CT-CGAGGGGAATA-T-G-A-C-TTT--C-C----TATAG-ACTGAA---T-AAA-TC-ATCAT-ATCCT-CC--c
gi|19572 : GAAAAGT-TTT-ATTC-CCCTCC-AT---CG-ATGT-C-TT-CC--GGGAATA-T-G-A-T-TTT--T-T----TA--G-GCGGAA---G-AAA-TC-TACAT-AT-CC-CC--TCACTGC
gi|19573 : GAAAAAG-TAT-ATTC-CCCTGG-AG---C--TTGT-C-CT-CG--GGGGATA-T-G-G-T-TTT--C-C----TT--G-AGTTAA---C-AAA-TC-TTTGT-TTCCC-TC--c
gi|19574 : GAAAAAT-CAT-ATTC-CC-------------TTA--------A--GGGAATA-T-G-A-T-ATT--T-C----TT--G-GGTGAA---T-AAA-TA-TCCAT-ATCTC-CC--TCAC
gi|19575 : GAAAAAT-AATTATTC-CCCTCA-TA---TG-CTGC-A-TA-TA--GGGAATA-T-G-A-T-TTT--T-G----TT--G-GAGGAA---T-ACA-TC-TCCAT-ATCTC-CC--TCATT
gi|19576 : GAAACAT-CAC-GTTT-TACTTG-AAGACCA-TTGTTC-CT-CG--AGGTATA-T-G-G-C-TTTCTT-T----TA--G-GCTGCA---T-AAA-TC-TCCAT-ATCCC-CCCGTCATTGC
gi|19577 : AAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAAAT-T-G-A---TTT--T-C----TT--G-G-TGAA---T-AAA-TC-TTCATCATCTC-CC--TCACc
gi|19578 : GAAAAGT-TTT-ATTC-CCCTCC-AT---CG-ATGT-C-TT-CC--GGGAATA-T-G-A-T-TTT--T-
gi|19579 : AAAAAT-CAT-ATTC-ACCAAG-GG---CA-TT---------------------------------T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTACtaggctgaataaatcgtcatgtcacc
gi|19580 : AAAACT-CAT-ATTC-CCCTCG-GA---CT-TTGC-C-AT-CG--GG-----------------------------------GAA---T-AAA-TT-TTCAT-AT-CT-CC--TCACTGCc
gi|19581 : AAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAAAT-T-G-A-T-TTT--c
gi|19581 : AAAAT-CAA-TTTC-CCCGAG-GG---CA-ACGC-C-CG-AG--GGGAATA-T-G-ATT-TTT--T-C----TT--G-AGTGAA---T-AGA-TC-TCCAT-ATCTC-CC--tcttgagtgaatagatctccatatctccc
gi|19582 : AAAATGCAC-AATC-CC-TCG-GG---CG-TTGC-C-GT-CG--GG--ATA-T-T---T-TTT--C-C----TA--C-GCTGAA---T-AAA-TC-TTCAT-ACCCG-CC--TCACTGC
gi|19583 : AAAAT-T-T-ATTC-CCCGAT-GG---CA-AAGT-C-CG-AG--GGGAATA-T-G-A-G-TTT--T------TAT-G-GCTGAA---C-AAA-TC-TTCAT-ATCCC-Cc
gi|19584 : AT-AAT-GTCC-CCCTCC-GG---TGATTGC-C-CT-CG--GGGGACA-T-G-A-T-ATT--A-C----TG--G-GTGGGA---C-AAA-GC-TCCAT-GTCTC-CC--TCtgaactacc
gi|19585 : T-ATTC-AGCCTA-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19586 : T-ATTCACCCAAGAGG---CG-TTGC-C-CT-CG--TGGAATA-T-G-A-T-TTT--T-G----TT--G-GGTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTc
gi|19587 : G---CG-TTGC-C-CT-CA--GGGAATA-T-G-A-T-TTT--T-C----TT--A-GCTGAA---T-AAA-TC-TTAAT-ATCTC-CC--TCACTGC
gi|19588 : G---CA-CCGT-C-CT--G--AGGAATAAT-G-G-T-TCT--T-T----TA--A-GCTGAA---T-AAA-TC-TCCAT-AT--C-CC--TCATTGCc
gi|19589 : ---CA-TTGC-C-CT-CG--AGGAGTA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--TCATTGCc
gi|19590 : ---CG-TTGC-C-CT-CG--AGGA-TA-T-G-G-T-TCT--C-T----TA--C-GTTGAA---T-AAA-TC-TTCAT-ACCCCGCC--TCATTGCc
gi|19591 : ---CA-TTGT-C-CA-CG--AGGAATA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAATTC-TCCAT-ATCCC-CC--TCATTGCc
gi|19592 : ---CA-TTGC-C-AC-TG--AGGA-TA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAT-CC-TTCAT-ATCCT-CC--CTA-TGC
gi|19593 : G-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCAC-CC--TCACTGCc
gi|19594 : G-TTGC-C-CA-TG--GGGAGTA-T-G-A-TTTTT--T-T----TG--G-GGGGAA---T-GAA-TT-TTCAA-ATCTC-CC--TTACTc
gi|19595 : -TTGC-C-CT-CG--AGGAATA-TTG-G-C-TCT--T------TA--G-GCTGAA---T-AAA-CCTTTCAT-ACCCC-CC--TCATTG
gi|19596 : -TTGC-CTCTGCC--AGGAATA-T-G-G-T-TCT--T-T----TA--C-GTTGAGAATT-GAA-TC-TTCAT-ATCCC-CC--TCATTGC
gi|19597 : -TTGC-C-TG-CG--AGGAATA-T-T-G-T-TGT--T-CATTTTA--ACGTTGAA---TTGAA-TC-TTCAT-ATCCC-CC--TCATTGCc
gi|19598 : TGC-C-CT-CG--ATGAACA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-----TCAT-ATCCC-TC--TCATTGCc
gi|19599 : TGC-C-CT-TG--GTGAATA-T-G-A-T-TTT--TTC----TA--A-GCTAAA---T-AAT-TC-ATCAT-ATCCC-CC--GAACTGc
gi|19600 : TGC-C-CT-CG--GGGGATA-T-G-C-T-TTT--T-T----TTTTG-G-TGAA---T-AAA-TC-TCTAT-ATCTC-CC--TCA
gi|19601 : TGC-C-CC-CG--TGGAATA-T-G-A-T-TTA--T-C----TT--G-AGTGAA---T-AGA-T--TTCAT-ACCTT-CC--TTACT
gi|19602 : GC-C-CT-CG--GGTAAAA-T-T-A-T-TTT--T-C----TT--G-AGTGAA---T-AAA-TC-GCCAT-ATCTC-CC--TCACT
gi|19603 : -C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19604 : -CC-CA--AGAAATA-T-G-G-T-TTT--T-C----TT--G-GGTGAA---T-AAA-TC-TCCAT-ATCTC-CC--TCACTAC
gi|19605 : G--GAGAATA-T-G-G-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TCCAT-GTCCC-CC--
gi|19606 : AATT-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-ATCAT-ATCCC-TC--
gi|19607 : ATA-T-T-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
Alignments
lowQualScore : 1 1 1 11 1 222 1 0 0 0 11 0 0 0 0 0 11 0 1111 33 0 111 0 0 0 0 0 11
lowQualScore : . . . .. . ... . . . . .. . . . . . .. . .... .. . ... . . . . . ..
lowQualScore : 7 5 5 99 5 222 1 9 9 9 22 9 9 9 9 9 22 9 9999 33 9 666 9 9 9 9 9 33
consensus : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
Reference ( family-434 ) : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19562 : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-TG--GGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19563 : GGAAAAT-CAT-ATTC-CCCAAG-GG---CA-ACGC-C-CG-AG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTGCc
gi|19564 : GAAAAAT-CAT-ACTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-GAA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19565 : GAATAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--C-C----TT--G-GCTTAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTACc
gi|19566 : GGAAAAT-CAT-ATTC-CCCGAG-GG---CA-ACGC-C-CG-AG--GGGAATA-T-G-A-T-TAT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CA--GAACTGCc
gi|19567 : GGAAAAT-CAT-ATTC-CCCGAG-GG---CA-ACGC-C------------------------------------TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTAC
gi|19568 : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTAC-C-CT-CG--GGAAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TA-TTTAT-AT
gi|19569 : GAAAAAT-CAT-ATTT-CCCGAG-GG---TA-ACGC-C-CG-AG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GTTGAA---T-AAA-TC-ATCAT-ATCCC-CC--
gi|19570 : GGAAAGT-CAT-ATTC-CCCTCG-AG---CG-TTGC-C-CC-CG------ATA-T-G-A-T-TTT--T-C----CA--A-ACTGAA---T-AAA-TC-TTCAT-ATCCA-CC--GAACTGC
gi|19571 : GAAAAAT-CAT-AT-------CG-GG---GG-CAAC-G-CT-CGAGGGGAATA-T-G-A-C-TTT--C-C----TATAG-ACTGAA---T-AAA-TC-ATCAT-ATCCT-CC--c
gi|19572 : GAAAAGT-TTT-ATTC-CCCTCC-AT---CG-ATGT-C-TT-CC--GGGAATA-T-G-A-T-TTT--T-T----TA--G-GCGGAA---G-AAA-TC-TACAT-AT-CC-CC--TCACTGC
gi|19573 : GAAAAAG-TAT-ATTC-CCCTGG-AG---C--TTGT-C-CT-CG--GGGGATA-T-G-G-T-TTT--C-C----TT--G-AGTTAA---C-AAA-TC-TTTGT-TTCCC-TC--c
gi|19574 : GAAAAAT-CAT-ATTC-CC-------------TTA--------A--GGGAATA-T-G-A-T-ATT--T-C----TT--G-GGTGAA---T-AAA-TA-TCCAT-ATCTC-CC--TCAC
gi|19575 : GAAAAAT-AATTATTC-CCCTCA-TA---TG-CTGC-A-TA-TA--GGGAATA-T-G-A-T-TTT--T-G----TT--G-GAGGAA---T-ACA-TC-TCCAT-ATCTC-CC--TCATT
gi|19576 : GAAACAT-CAC-GTTT-TACTTG-AAGACCA-TTGTTC-CT-CG--AGGTATA-T-G-G-C-TTTCTT-T----TA--G-GCTGCA---T-AAA-TC-TCCAT-ATCCC-CCCGTCATTGC
gi|19577 : AAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAAAT-T-G-A---TTT--T-C----TT--G-G-TGAA---T-AAA-TC-TTCATCATCTC-CC--TCACc
gi|19578 : GAAAAGT-TTT-ATTC-CCCTCC-AT---CG-ATGT-C-TT-CC--GGGAATA-T-G-A-T-TTT--T-
gi|19579 : AAAAAT-CAT-ATTC-ACCAAG-GG---CA-TT---------------------------------T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTACtaggctgaataaatcgtcatgtcacc
gi|19580 : AAAACT-CAT-ATTC-CCCTCG-GA---CT-TTGC-C-AT-CG--GG-----------------------------------GAA---T-AAA-TT-TTCAT-AT-CT-CC--TCACTGCc
gi|19581 : AAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAAAT-T-G-A-T-TTT--c
gi|19581 : AAAAT-CAA-TTTC-CCCGAG-GG---CA-ACGC-C-CG-AG--GGGAATA-T-G-ATT-TTT--T-C----TT--G-AGTGAA---T-AGA-TC-TCCAT-ATCTC-CC--tcttgagtgaatagatctccatatctccc
gi|19582 : AAAATGCAC-AATC-CC-TCG-GG---CG-TTGC-C-GT-CG--GG--ATA-T-T---T-TTT--C-C----TA--C-GCTGAA---T-AAA-TC-TTCAT-ACCCG-CC--TCACTGC
gi|19583 : AAAAT-T-T-ATTC-CCCGAT-GG---CA-AAGT-C-CG-AG--GGGAATA-T-G-A-G-TTT--T------TAT-G-GCTGAA---C-AAA-TC-TTCAT-ATCCC-Cc
gi|19584 : AT-AAT-GTCC-CCCTCC-GG---TGATTGC-C-CT-CG--GGGGACA-T-G-A-T-ATT--A-C----TG--G-GTGGGA---C-AAA-GC-TCCAT-GTCTC-CC--TCtgaactacc
gi|19585 : T-ATTC-AGCCTA-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19586 : T-ATTCACCCAAGAGG---CG-TTGC-C-CT-CG--TGGAATA-T-G-A-T-TTT--T-G----TT--G-GGTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTc
gi|19587 : G---CG-TTGC-C-CT-CA--GGGAATA-T-G-A-T-TTT--T-C----TT--A-GCTGAA---T-AAA-TC-TTAAT-ATCTC-CC--TCACTGC
gi|19588 : G---CA-CCGT-C-CT--G--AGGAATAAT-G-G-T-TCT--T-T----TA--A-GCTGAA---T-AAA-TC-TCCAT-AT--C-CC--TCATTGCc
gi|19589 : ---CA-TTGC-C-CT-CG--AGGAGTA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--TCATTGCc
gi|19590 : ---CG-TTGC-C-CT-CG--AGGA-TA-T-G-G-T-TCT--C-T----TA--C-GTTGAA---T-AAA-TC-TTCAT-ACCCCGCC--TCATTGCc
gi|19591 : ---CA-TTGT-C-CA-CG--AGGAATA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAATTC-TCCAT-ATCCC-CC--TCATTGCc
gi|19592 : ---CA-TTGC-C-AC-TG--AGGA-TA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAT-CC-TTCAT-ATCCT-CC--CTA-TGC
gi|19593 : G-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCAC-CC--TCACTGCc
gi|19594 : G-TTGC-C-CA-TG--GGGAGTA-T-G-A-TTTTT--T-T----TG--G-GGGGAA---T-GAA-TT-TTCAA-ATCTC-CC--TTACTc
gi|19595 : -TTGC-C-CT-CG--AGGAATA-TTG-G-C-TCT--T------TA--G-GCTGAA---T-AAA-CCTTTCAT-ACCCC-CC--TCATTG
gi|19596 : -TTGC-CTCTGCC--AGGAATA-T-G-G-T-TCT--T-T----TA--C-GTTGAGAATT-GAA-TC-TTCAT-ATCCC-CC--TCATTGC
gi|19597 : -TTGC-C-TG-CG--AGGAATA-T-T-G-T-TGT--T-CATTTTA--ACGTTGAA---TTGAA-TC-TTCAT-ATCCC-CC--TCATTGCc
gi|19598 : TGC-C-CT-CG--ATGAACA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-----TCAT-ATCCC-TC--TCATTGCc
gi|19599 : TGC-C-CT-TG--GTGAATA-T-G-A-T-TTT--TTC----TA--A-GCTAAA---T-AAT-TC-ATCAT-ATCCC-CC--GAACTGc
gi|19600 : TGC-C-CT-CG--GGGGATA-T-G-C-T-TTT--T-T----TTTTG-G-TGAA---T-AAA-TC-TCTAT-ATCTC-CC--TCA
gi|19601 : TGC-C-CC-CG--TGGAATA-T-G-A-T-TTA--T-C----TT--G-AGTGAA---T-AGA-T--TTCAT-ACCTT-CC--TTACT
gi|19602 : GC-C-CT-CG--GGTAAAA-T-T-A-T-TTT--T-C----TT--G-AGTGAA---T-AAA-TC-GCCAT-ATCTC-CC--TCACT
gi|19603 : -C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19604 : -CC-CA--AGAAATA-T-G-G-T-TTT--T-C----TT--G-GGTGAA---T-AAA-TC-TCCAT-ATCTC-CC--TCACTAC
gi|19605 : G--GAGAATA-T-G-G-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TCCAT-GTCCC-CC--
gi|19606 : AATT-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-ATCAT-ATCCC-TC--
gi|19607 : ATA-T-T-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
blockSeqs : G T A AA A GAC A AG CT ATTT TA AAT CG
blockSeqs : . . . TC . . . . . . TT . .
blockSeqs : . . . TC . . . . . . T . .
blockSeqs : . . . GA . . . . . . . . .
blockSeqs : . . . GA . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . GA . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . TG . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . TT . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . AA . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . GA . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . GA . . . . . . . . .
blockSeqs : . . . TC . . . . . . . . .
blockSeqs : . . . CT . . . . . . . . .
blockSeqs : . . . AA . . . . . . . . .
blockSeqs : . . C . . . . . . . . .
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blockSeqs : . . . . . . .
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blockSeqs : . . . . .
blockSeqs : .
blockSeqs : .
blockSeqCons :
originalCons : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
finalCons : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
Alignments
lowQualScore : 1 1 1 11 1 222 1 0 0 0 11 0 0 0 0 0 11 0 1111 33 0 111 0 0 0 0 0 11
lowQualScore : . . . .. . ... . . . . .. . . . . . .. . .... .. . ... . . . . . ..
lowQualScore : 7 5 5 99 5 222 1 9 9 9 22 9 9 9 9 9 22 9 9999 33 9 666 9 9 9 9 9 33
consensus : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
Reference ( family-434 ) : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19562 : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-TG--GGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19563 : GGAAAAT-CAT-ATTC-CCCAAG-GG---CA-ACGC-C-CG-AG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTGCc
gi|19564 : GAAAAAT-CAT-ACTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-GAA-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19565 : GAATAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--C-C----TT--G-GCTTAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTACc
gi|19566 : GGAAAAT-CAT-ATTC-CCCGAG-GG---CA-ACGC-C-CG-AG--GGGAATA-T-G-A-T-TAT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CA--GAACTGCc
gi|19567 : GGAAAAT-CAT-ATTC-CCCGAG-GG---CA-ACGC-C------------------------------------TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--GAACTAC
gi|19568 : GAAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTAC-C-CT-CG--GGAAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TA-TTTAT-AT
gi|19569 : GAAAAAT-CAT-ATTT-CCCGAG-GG---TA-ACGC-C-CG-AG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GTTGAA---T-AAA-TC-ATCAT-ATCCC-CC--
gi|19570 : GGAAAGT-CAT-ATTC-CCCTCG-AG---CG-TTGC-C-CC-CG------ATA-T-G-A-T-TTT--T-C----CA--A-ACTGAA---T-AAA-TC-TTCAT-ATCCA-CC--GAACTGC
gi|19571 : GAAAAAT-CAT-AT-------CG-GG---GG-CAAC-G-CT-CGAGGGGAATA-T-G-A-C-TTT--C-C----TATAG-ACTGAA---T-AAA-TC-ATCAT-ATCCT-CC--c
gi|19572 : GAAAAGT-TTT-ATTC-CCCTCC-AT---CG-ATGT-C-TT-CC--GGGAATA-T-G-A-T-TTT--T-T----TA--G-GCGGAA---G-AAA-TC-TACAT-AT-CC-CC--TCACTGC
gi|19573 : GAAAAAG-TAT-ATTC-CCCTGG-AG---C--TTGT-C-CT-CG--GGGGATA-T-G-G-T-TTT--C-C----TT--G-AGTTAA---C-AAA-TC-TTTGT-TTCCC-TC--c
gi|19574 : GAAAAAT-CAT-ATTC-CC-------------TTA--------A--GGGAATA-T-G-A-T-ATT--T-C----TT--G-GGTGAA---T-AAA-TA-TCCAT-ATCTC-CC--TCAC
gi|19575 : GAAAAAT-AATTATTC-CCCTCA-TA---TG-CTGC-A-TA-TA--GGGAATA-T-G-A-T-TTT--T-G----TT--G-GAGGAA---T-ACA-TC-TCCAT-ATCTC-CC--TCATT
gi|19576 : GAAACAT-CAC-GTTT-TACTTG-AAGACCA-TTGTTC-CT-CG--AGGTATA-T-G-G-C-TTTCTT-T----TA--G-GCTGCA---T-AAA-TC-TCCAT-ATCCC-CCCGTCATTGC
gi|19577 : AAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAAAT-T-G-A---TTT--T-C----TT--G-G-TGAA---T-AAA-TC-TTCATCATCTC-CC--TCACc
gi|19578 : GAAAAGT-TTT-ATTC-CCCTCC-AT---CG-ATGT-C-TT-CC--GGGAATA-T-G-A-T-TTT--T-
gi|19579 : AAAAAT-CAT-ATTC-ACCAAG-GG---CA-TT---------------------------------T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTACtaggctgaataaatcgtcatgtcacc
gi|19580 : AAAACT-CAT-ATTC-CCCTCG-GA---CT-TTGC-C-AT-CG--GG-----------------------------------GAA---T-AAA-TT-TTCAT-AT-CT-CC--TCACTGCc
gi|19581 : AAAAAT-CAT-ATTC-CCCTCG-GG---CG-TTGC-C-CT-CG--GGGAAAT-T-G-A-T-TTT--c
gi|19581 : AAAAT-CAA-TTTC-CCCGAG-GG---CA-ACGC-C-CG-AG--GGGAATA-T-G-ATT-TTT--T-C----TT--G-AGTGAA---T-AGA-TC-TCCAT-ATCTC-CC--tcttgagtgaatagatctccatatctccc
gi|19582 : AAAATGCAC-AATC-CC-TCG-GG---CG-TTGC-C-GT-CG--GG--ATA-T-T---T-TTT--C-C----TA--C-GCTGAA---T-AAA-TC-TTCAT-ACCCG-CC--TCACTGC
gi|19583 : AAAAT-T-T-ATTC-CCCGAT-GG---CA-AAGT-C-CG-AG--GGGAATA-T-G-A-G-TTT--T------TAT-G-GCTGAA---C-AAA-TC-TTCAT-ATCCC-Cc
gi|19584 : AT-AAT-GTCC-CCCTCC-GG---TGATTGC-C-CT-CG--GGGGACA-T-G-A-T-ATT--A-C----TG--G-GTGGGA---C-AAA-GC-TCCAT-GTCTC-CC--TCtgaactacc
gi|19585 : T-ATTC-AGCCTA-GG---CG-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC
gi|19586 : T-ATTCACCCAAGAGG---CG-TTGC-C-CT-CG--TGGAATA-T-G-A-T-TTT--T-G----TT--G-GGTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCATTc
gi|19587 : G---CG-TTGC-C-CT-CA--GGGAATA-T-G-A-T-TTT--T-C----TT--A-GCTGAA---T-AAA-TC-TTAAT-ATCTC-CC--TCACTGC
gi|19588 : G---CA-CCGT-C-CT--G--AGGAATAAT-G-G-T-TCT--T-T----TA--A-GCTGAA---T-AAA-TC-TCCAT-AT--C-CC--TCATTGCc
gi|19589 : ---CA-TTGC-C-CT-CG--AGGAGTA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATTCC-CC--TCATTGCc
gi|19590 : ---CG-TTGC-C-CT-CG--AGGA-TA-T-G-G-T-TCT--C-T----TA--C-GTTGAA---T-AAA-TC-TTCAT-ACCCCGCC--TCATTGCc
gi|19591 : ---CA-TTGT-C-CA-CG--AGGAATA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAATTC-TCCAT-ATCCC-CC--TCATTGCc
gi|19592 : ---CA-TTGC-C-AC-TG--AGGA-TA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAT-CC-TTCAT-ATCCT-CC--CTA-TGC
gi|19593 : G-TTGC-C-CT-CG--GGGAATA-T-G-A-T-TTT--C-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCAC-CC--TCACTGCc
gi|19594 : G-TTGC-C-CA-TG--GGGAGTA-T-G-A-TTTTT--T-T----TG--G-GGGGAA---T-GAA-TT-TTCAA-ATCTC-CC--TTACTc
gi|19595 : -TTGC-C-CT-CG--AGGAATA-TTG-G-C-TCT--T------TA--G-GCTGAA---T-AAA-CCTTTCAT-ACCCC-CC--TCATTG
gi|19596 : -TTGC-CTCTGCC--AGGAATA-T-G-G-T-TCT--T-T----TA--C-GTTGAGAATT-GAA-TC-TTCAT-ATCCC-CC--TCATTGC
gi|19597 : -TTGC-C-TG-CG--AGGAATA-T-T-G-T-TGT--T-CATTTTA--ACGTTGAA---TTGAA-TC-TTCAT-ATCCC-CC--TCATTGCc
gi|19598 : TGC-C-CT-CG--ATGAACA-T-G-G-T-TCT--T-T----TA--G-GCTGAA---T-AAA-----TCAT-ATCCC-TC--TCATTGCc
gi|19599 : TGC-C-CT-TG--GTGAATA-T-G-A-T-TTT--TTC----TA--A-GCTAAA---T-AAT-TC-ATCAT-ATCCC-CC--GAACTGc
gi|19600 : TGC-C-CT-CG--GGGGATA-T-G-C-T-TTT--T-T----TTTTG-G-TGAA---T-AAA-TC-TCTAT-ATCTC-CC--TCA
gi|19601 : TGC-C-CC-CG--TGGAATA-T-G-A-T-TTA--T-C----TT--G-AGTGAA---T-AGA-T--TTCAT-ACCTT-CC--TTACT
gi|19602 : GC-C-CT-CG--GGTAAAA-T-T-A-T-TTT--T-C----TT--G-AGTGAA---T-AAA-TC-GCCAT-ATCTC-CC--TCACT
gi|19603 : -C-CT-CG--GGGAATA-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--GAACTGC
gi|19604 : -CC-CA--AGAAATA-T-G-G-T-TTT--T-C----TT--G-GGTGAA---T-AAA-TC-TCCAT-ATCTC-CC--TCACTAC
gi|19605 : G--GAGAATA-T-G-G-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TCCAT-GTCCC-CC--
gi|19606 : AATT-T-G-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-ATCAT-ATCCC-TC--
gi|19607 : ATA-T-T-A-T-TTT--T-C----TA--G-GCTGAA---T-AAA-TC-TTCAT-ATCCC-CC--TCACTGC