lowQualScore : 1111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111 22222222222222222222222222222222222222222 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 444444444 1 2222222222222222222222222222222222 1 2 1 22 77777777777777777777777777 11 22222 22 111 333 44444444444444444444444444444444444444 333333 2222 22 22 2 33 1 1 8888888888 11 2 2 8888888888888888 2222 444 333 1 2 3333333333 1 2 11 22 2 66666666666666666666666 333 22222 22 2 11 2222 4 1 2 11 11 2 2222 222 77777777777777777 3 4 1 222 1111 1 444 8888888888 1 44 44444 1 11 5555 11 1 1 222 1 111 5555555555555 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 1 4444444444 1 1111 22 11 222 66666666666666666666666666666 11 11 11 666666666666666666 1 1 1 333333333333333333333333333333333333333333333333333333333333333333 1 33333 1 4 55 2222222 2 555555 66666666666666666666666666666666 1 444444 1 22 1 22 00000000000000000000000000000000000000000 33 11 1 999999999 1 55555555555555 11 1111 11 22 3 22 88888888888888888 11111 33 444 1 111 2 1 1 2 1 1 44 11 1 1 1 11 1 3333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 33333 33 1111 11 1 33 4444444444444444444444444444 1 1 11 11 11 1 111 11 1 111 1 1 1 11 11 5555555 1 2 111 444444 444444444444 22 111 2222222 444444444 333333333333 111 3333333333 1 444 33 1 222 11 1 11 4444444444444444 22222222222 111111 11 222222 111 1111 2222222222222222222222222222222222222222222222222222222222222222 1111 1111 000000000000000000000000000000000000000000000000000000000000000000 555555555555555 1 3333333 44444444444444444444444444444444444444444 22222222222222222 222222222 111111111 22 1111111 222222 11 55555555 3 222222 1111 6666666666666666 3 3
lowQualScore : 88 000000000 5 0000000000000000000000000000000000 0 99 7 3 0 22 99999999999999999999999999 00 11111 99 8 444 111 33333333333333333333333333333333333333 8 111111 2222 3 55 2 77 3 99 6 22 3 3 7777777777 88 6 1 1 7 8 7 9999999999999999 8888 8 555 777 2 3 0 0 8888888888 0 0 33 44 22 0 3 0 22222222222222222222222 666 22222 33 3 0 33 4444 0 3 77 5 3 0 88 2 33 0 7777 8 77 666 33333333333333333 8 2 0 5 888 9999 7 3 666 9999999999 3 11 11111 4 6 0 5 88 33 8 8 4444 8 8 11 6 88 0 333 2 6 444 0000000000000 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 6 0 1111111111 6 3 7777 55 44 7 333 99999999999999999999999999999 88 88 88 6 666666666666666666 3 3 3 3 222222222222222222222222222222222222222222222222222222222222222222 3 22222 3 7 0 0 55 5555555 3 666666 99999999999999999999999999999999 3 777777 0 7 3 9 11 3 00 22222222222222222222222222222222222222222 6 11 44 2 444444444 6 3 88888888888888 11 7777 8 11 8 7 33 6 0 6 55 888 99 99 88888888888888888 2 66666 77 000 2 2 0 3 666 7 0 0 0 0 8 0 3 4 00 33 6 0 0 3 0 33 2 0 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 33333 44 2222 11 3 3 22 9999999999999999999999999999 2 0 0 22 33 33 0 3 777 88 0 777 0 5 0 22 2 11 7777777 8 8 6 6 8 8 111 000000 666666666666 8 8 66 6 6 6 111 6 9999999 8 8 000000000 333333333333 666 8 8 8 8 0 8 0 8 88 8 1111111111 6 8 111 55 8 5 222 11 1 0 11 9999999999999999 1 33333333333 6 999999 00 6 77 1 555555 5 777 99 2222 3333333333333333333333333333333333333333333333333333333333333333 6 888 6 99 3 8888 6 5555 6 111111111111111111111111111111111111111111111111111111111111111111 8 777777777777777 5 8 0000000 8 33333333333333333333333333333333333333333 66666666666666666 4 888888888 44 333333333 3 3 00 44 3 3 3333333 222222 33 00000000 44 2 2 5 0 0 3 3 4 4 0 3 3 77 888888 44 1111 44 555 3 6 3 9999999999999999 777 4 7 55 4 4 4
lowQualScore : .. ......... . .................................. . .. . . . .. .......................... .. ..... .. . ... ... ...................................... . ...... .... . .. . .. . .. . .. . . .......... .. . . . . . . ................ .... . ... ... . . . . .......... . . .. .. .. . . . ....................... ... ..... .. . . .. .... . . .. . . . .. . .. . .... . .. ... ................. . . . . ... .... . . ... .......... . .. ..... . . . . .. .. . . .... . . .. . .. . ... . . ... ............. ............................................................................................................... . . .......... . . .... .. .. . ... ............................. .. .. .. . .................. . . . . .................................................................. . ..... . . . . .. ....... . ...... ................................ . ...... . . . . .. . .. ......................................... . .. .. . ......... . . .............. .. .... . .. . . .. . . . .. ... .. .. ................. . ..... .. ... . . . . ... . . . . . . . . . .. .. . . . . . .. . . ........................................................................................... ..... .. .... .. . . .. ............................ . . . .. .. .. . . ... .. . ... . . . .. . .. ....... . . . . . . ... ...... ............ . . .. . . . ... . ....... . . ......... ............ ... . . . . . . . . .. . .......... . . ... .. . . ... .. . . .. ................ . ........... . ...... .. . .. . ...... . ... .. .... ................................................................ . ... . .. . .... . .... . .................................................................. . ............... . . ....... . ......................................... ................. . ......... .. ......... . . .. .. . . ....... ...... .. ........ .. . . . . . . . . . . . . .. ...... .. .... .. ... . . . ................ ... . . .. . . .
lowQualScore : 00 555555555 5 5555555555555555555555555555555555 5 55 5 2 0 22 55555555555555555555555555 44 00000 44 0 000 000 22222222222222222222222222222222222222 0 666666 0000 2 55 0 55 2 22 7 33 3 3 7777777777 33 7 0 0 3 7 3 7777777777777777 3333 3 777 333 5 2 0 0 2222222222 0 0 88 55 55 8 2 0 22222222222222222222222 222 88888 88 2 0 88 8888 0 2 88 5 0 0 88 0 88 0 1111 3 77 777 00000000000000000 3 3 0 0 000 0000 0 3 777 0000000000 3 00 00000 0 0 8 0 66 66 0 0 2222 0 0 00 0 88 0 888 8 0 000 6666666666666 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 0 8 3333333333 0 3 7777 77 00 3 333 77777777777777777777777777777 33 33 33 7 000000000000000000 3 7 3 3 000000000000000000000000000000000000000000000000000000000000000000 3 00000 3 3 0 7 00 7777777 3 777777 33333333333333333333333333333333 3 777777 7 3 3 0 77 3 77 77777777777777777777777777777777777777777 7 77 00 0 000000000 7 3 00000000000000 00 0000 0 00 0 3 22 7 2 7 33 333 22 22 55555555555555555 5 77777 00 888 5 5 0 2 222 5 0 0 0 0 8 0 2 2 55 88 0 0 5 2 0 88 5 0 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 33333 00 3333 33 3 2 55 0000000000000000000000000000 5 0 5 55 88 88 0 2 555 88 0 555 0 5 0 55 5 00 2222222 0 0 4 0 2 0 000 666666 888888888888 0 0 11 7 7 7 777 7 1111111 0 0 222222222 666666666666 000 0 0 0 0 8 0 8 0 88 0 6666666666 0 0 222 88 0 0 888 00 2 8 00 2222222222222222 0 44444444444 7 222222 77 7 99 7 000000 7 777 22 0000 3333333333333333333333333333333333333333333333333333333333333333 7 333 7 22 5 3333 7 0000 7 555555555555555555555555555555555555555555555555555555555555555555 0 888888888888888 0 0 8888888 0 00000000000000000000000000000000000000000 44444444444444444 4 111111111 22 222222222 1 1 88 22 3 3 3333333 222222 88 11111111 22 9 9 7 6 8 6 6 0 0 0 3 3 99 444444 66 7777 66 888 3 7 6 4444444444444444 000 0 5 55 0 0 1
consensus : CATGTCAAAGTGGAAGGCA-GTTTGNTAGCAGTTATTAAGCCTTCCCAGTTGTTACTTGCCTAGGCAGTTTATTNTAGCCGTCCTTTAACCTTCC-TTAGCCT-TCCCTTTCTATTCTGGCAAA-GTGATAA-ATTA-TCATG-AAAATTAAGTC-ATGTTCAATGACA-GTTTT---TCTTTACGCCTTACCA-GTTTTCGTTAAGC-----ATGTA---CT---GG----AGCAG-TTATTTTCATAGCG-AAAAATGGTATAATGAGAT-GAAGAATAAACTNGCTTAGC-GACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTGC-TAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCA-GGTGT---TAAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAATCAATAGGAAAGTCTAATA----AT---GGGA-AA-AAAAAAAAAAAAACAACCAAGGAAAATATG-AAATTGGTAAATTAAATTATTTA--TCAA--CATTT-TTGTTTCCATTTCAGANCAACATAAATTTA--CATTTTTTT--CCCCAAACAAATT--TGGAAAAGAG---AAACT-AGTGAA--TGTTGACTAAAAT-TATGAAACAAAATTTTCATTTA-A-TTCG-AGTTGGTAA-TATATATGGTAATACAATGATA--ACATCC-CAA-TGAACTTCCAG-AGAATNATTCAAACACTCAGT-AAATG-A-TT---AAATTCCA-AC-AC--TGAAA-ATTGATGGAAACCC--AGATAA-CTGC---AGAAATTCT-TCGAAT-AAT--AAAGCTGTAAAATGT-A-T-ATATC--ATTCAA-----CTTGT-TCCAAATAATTATAGTTCCAAT----ATTACAAC-GACAA-G--CAG--TTT-AATCC--A--CG-A-----ATAAATCCAACATAC-----GGTT-CCGTCC-ATTTTTTATTCGCAG-TTCACGAACT---AGTGC-CTG-GT-CA-AAGT--TGAAA-------CA--CATTT--GT--CGCAGCTTCAT----C-TNA----GATTTCAC-TCGGCCCGNAA-AGT-CAA----AGGAT-AT---AAAACTATANTGCGC------AGT-CCT-TCATT----TCACA--AGTT-GATAA-ACA--CC-CATTT-TGGATA-ATCTACA--TGACT-CCACGAAG-AAAAGA-GC-CCTGGCAACACTCTTG------GA---AANAAA-----ATTGAAAATAAT-ACA--A-GGTTATGATAT-AATTT-ATAA-CAA-AGCTA-A-----CACGACCAATA----TTGGC-GTA-G-TGC-A-AAATGCAACATTTG-CGGGGGTCCAAATATG--TTTA--ACAT-CGGAGTG--GTTATATA----CAT--TA----AAACAACA-GAGGA--TG-AATGCGAT-TCTCACAGAATT-AAATAAA-TTAAAAA-TCAAA-CA-A-AA--ATAA--TTGAG-----TA-----TA--TAAGATCCCAACTCTAC-----ATTTTACA-TTCCATTTCAAAA-TGGACTCGGT-GTAGGA--GCCG-CGCCG-AC-GAGGGCC-TT-CGTCCCGGG-TCCTCGTCTT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATC-TAA----TACTTGAAGACGNCNCGNNCAAGTATAATAAATAATATNNCTCGNNNAATCTTCGGAAGA---A-----AN--GG--GAACG----GTCCAA-----ACAAAATCTCGCTGAGATTGAAAAATCA-TCAGTCTATGAAATACACAGTAAA-A-TA-CT-TACTCATATAACACAT---CTGGATATCC-TCTATAGAA-CAGC--AG--CT-ACATA---TAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TTTTA-CAG-CAATCAA-AGGC-GCAA-TCCTG-AAT-C-TGTC--A-AAACGCGCGCCCAT----GCT-TGCACA-G-AGTTAATC-G-TC-CTTT---TTA-TT-TAAAT-TGACGCA-TAACACA-C--CC-GATTGCTTTTTTT---AAA-CCC--GATC-G-AC-TAAA-TGACAC-G-AATATCTTTC-AAAAC-TAA-TT-GATTATAGT-TTCTGTTCC-AACGGT--ATTATGAT-ATAT-TGGTATTGAT--TTTC--CTANTTGCATTT--CTGGTT-TGAAA-------AAATTAT--AAA-----TCAAGTTG-ATT------TAAATAA-TTTA--AACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TTT--CT--TA--GTAA----T-------------AAATC-----AA------AA-A--AAAAA-AAAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCATAC--------TATA-TA-ATATA---ATATATT-------------------------G-T---AAGC-TAGCT-------G------CTTGCACTTGTCCAG-T-TTGCA-AAA-GTTAG----AT-AT-T----AGGAG----ACT----AAA-TGAAT-TGAACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTA-NACT--GCT-----A---G-TG-AAA-CT--GC-TAAG-AAT------TAACT----GC--TTATACTGAA--TTC--TTAGC-AG-TTT-ACAAGTAGTAG-T-AAAA-C-CACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAGA-A--CT--GCC--TAGC-AACTG---CTAAA-ATA-AG--CA-GTT-CATT-TTTCCTTGG
Reference ( gi|2 ) : CATGTCAAAGTGGAAGGCACGTTTGGTTGCAGTTATTAAGCCTTCCCAGTT-TTACTTTCTTAGGCAGTTT--TATAGCAGTTCTATAACCTTCCCTTAGCCT-TCT-TTTCTATTCTTGCAAAAGTAATAATATTACTCATG-AAAATCAAG-C-A-GTTCAATGGCA-GTTTT---TCTT-A-GCCTTACCAAGTT--CGT-AAGC-----A-GTA---CT--TAG----AGCAG-TTATTTTCA--GCGGAAAAATG-TA-AATGAGAT-GAGGAA--AACTGGCT-AGCCGACTGCTTAGGAA-CTGCTA-GTCCGATGTTCGCATATA--TGGTAGTGT-CTAATGAATATTCAAGGCAATACAATGAGGCTCTAAACTTG-AG-CAAATCTGCCTAGCAA----GGATTTACAATTTTTCAAACATTAAAACCCCTATTAAAATCA-G-TGT---TCAAA--AT-CTATGGAA-TAAGCAAT--ACACTATTCAA-CAATAGGAAAGTTT-ATA----ATGGGGGGA-AA-AATAATAAAAAAACAATGCAGAAAAA-ATA-AAATTGGTAAATT-AATTATTTA--TC-A--CATTTGTTGTTTTCATTTCAGAAC-ACATAAATCTA--CA-TTTTTT--CGCCATATCAATA--TGGAAAAGAGAGAAAACTAAATGGAATTGTTGACTAAATTATATGAAACAAAA-TTTAATTTA-ATTTCG-AGATTGTAA-TATAT---GTAATA----GATC-TACATCC-CAGTTGAACTTCCAG-AG--TAATTC-AACACTCAGT-AAACG-A-TTTCAAAATTCCA-AC-AC--TG-AA-ATTGATGGAAACCT--AGACAA-CTGC---AGAAATTCTATCGGAT--ATCAAAAGCTGT----TGT-A-T-ATATT--ATTC-A-----CTGGT-TC--AATAAATATATTTCCAAT----ATT-CAGCAAACAA-G--CAG--TTA-AATCC--C--CA-A-----AT-AATCC-ACATAC-----AGTTGCTGTCC-ATTTTTTATTTGCAA-TTCACAAACT---AGTGC-CTGCGTTCATAAGT--TGAAA-------CA--CATTT--GT--CGCAGCTTCAT----C-TAA----GATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGATTATTTAAAAACTGTATTGCGCTTTGCTAGT-CCT-TCATTGAAATCACAGCAGTTTGATAA-ACA-GCCTCATTT-TGGATAGATCTGCAAATGACT-CCGTGAAGGAAAAGAAGCCTTTGGCAACACTGCTG------GA--CAACAAA-----ATGAAGAATAAT-ACA--A-AATTATGGTAT-AGTTA-ATAA-CAA-AGCTAGACCCCTCACGGCCAATAGGCATTGGCAGTA-GGTGC-A-AAATGCAACATTT--TGGGGGTCCACATATAAATTTACGACAT-CGGAGTGCGGTCATAT-----CAT--TA----AAACAACA-GAGGA--TG-AATGCGAT-TCTCACAGAATT-AAATAAAGTTAAAAA-TCAAATCA-A-AA--ATAA--TTGAG-----TACTAT-TA--TAAGATCCCAACTCTAC-----ATTTTACAATTCCATTTCAAAC-TGGACTCGGT-GTAGGA--GCCGGCGCCG-AC-GAGGGCC-TT-CGTCCCGGG-TCCTCGTCCTTGGCAC--AGAAAT-CATAAATCT-CAAAAA--TATTCGTCGAGGCTTGATC-TA-----TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGA---A-----AG--GG--GAACA----GTCCAA-----ACAAA-TCTCGCTGTGATTAAAAAATCA-TCAGTCTATGAAATACAC-GTAAA-AATAACTGTACTCATATAAAACTT---CTGGATATCC-TCTAAAGAA-CAGC--AG--CT-ACATA---TAC-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCATGTTTTAACAG-CAATCAA-AGGC-GCAAGTCCTG-AAT-C-TGTT--ACAAACGCGCGCGCAT----TCTCTGCACA-G-AGTTAATC-G-TC-CTTT---TTA-TT-CAAATGTGACGCA-TAACACA-C--C--GATTGCTTTTTTT---GA--CC---GATC-G-AC-TAAA-TGACAC-G-AATATCTTTC-AAAAC-TAA-TT-GATTACAGT-TTCTGT-CC-AACGGTTAATTATGATCATAT-TGGTATTGAA--TTTC--CTATTTGCATTT--CTGA---TGAAA-------GAATTAT--TAA-----TCAAGTTG-ATT------TAGATAA-TTTA--AACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TTT--CT--TA--GT------T-------------AAATC-----AA------AA-A--AAAAA-AAAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCATAC--------TATA-TA-ATATA---ATATATT-------------------------G-T---AAGC-TAGCT-------G------CTTGCACTTGTCAAG-TGTTGCAGAAA-GTTAG----AT-AT-T----AGGAG----ACT----AAA-TGGATCTGAACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTA-ATCT--GCT-----A---G-TG-AA--CT--GC-TAAG-AAT------TAACT----GC--TTAT-CTGAAT-TTC--TTAGC-AG-TTT-ACAAGTAGTAG-T-AAAA-C-CACAAGCTGCTTGGA-A-CTG--TTAGAATA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAGA-A--C---GCCTTTAGC-AACTG---CTAAA-ATAGAG--CA-GTT-CATTCTTTCCTTGG
gi|16 : CATGTCAAAGTGGAAGGCA-GTTTGCTAGCAGTTATTAAGCC-TTCC------------------CAGTTT--TAT------TTTAGAG--TTCCCT-AACCT-TCC-ATACTCTTCTGACAAA----------TTG---GTG-GAAA-CAAG-C-A-GTTCAA-AACA-GTTTT---TCTT-A-GCTTTCCCT-GTT--TTT-AACC-----A-GTAGATCTACTGG----AGCAG-TTATTTTCA--ATG-AAAAATG-TA-AATGAGAT-GAAGAA--AACTG
gi|1 : ttaaggtgacaaaatatgtatataaagtaaacacttcccataAGTG--AGGCA-GTT--GTAGCAGTTATTAAGCCTTCCCAGTTGTTACTTGCCTAGGC-GTTTATTTTAGCCGTTCCTTA-CCTTCC-TTAGCCAATCT-TTTCTATTCTGG---AAGTAATAAAATTAC--ATTTAAAAT-AAG-CGA-ATACAGAGAGATATTTT---TCTTTA-GCCTTACCA-GTT--CGT-AAGC-----A-GTA---CT--GAG----AGCAGCTTATTTTCA--GCG-AAAAATG-TA-A-TGAGATTGAGGAA--A-CTG-CT-AGCAGACTGCTTAGGAATCTGCTAAGTC----ATTC--ATATAATTGGTAGTGT-CTAATGAATATTCA-GGCAATACAATGAGGATTTA--CTAGTAG-CAA---TGC-TAGCAATAGGAGATTTACAATTCTTCA--CATTAAAACAC-TATTAAAA-CA-G-TGTGTTCCAGA--ATACTATGGTA-TTAGCAATTAACACTATTCAA----------AGTTT-ATATCTAATGGGGAAATAATAATAAAAAAAAAACAAT-CAAAGAAA-ATATAAATTG-TAAATT-AATTATTTAGTTC-AATCATTT-TTGTT--CATTTCAGAAC-ACATAAATCTAATTA-TTTTTTTTC-CCATATCAAAAATTGGAAAAGAGA-AAAACTAA-TGAA--TGTTGACTAAATTTAATGAAACAAAAATTTCATTTAGATTTCGTCTATTGTAAGTATAT---ATAATA----CATGATACATCCACA-TTGAACTTCCAG-----TTATTC-ATC--TCAGTTAAACGCACTTTTAAAATTCCA-AC-AC--TG-AA--TTGATGCAAAACC--AGACAA-CTGC---CGAAATTCT-TCGGATCAATATAAAGCTGT----TGT-A-T-AT--T--ATTC-A-----CTAGTATC--AATAAATATTGATCCAAT----ATT-CA-CAACCAA-G--CAG--TTTTAATCC--A--CA-ATATCCAC-AATCC-AC-TAC-----AGTT-CCGTCA-TTTTTTTATT-GCA---TCACAA-CT---AGTGC-CTATGTTTCTATGT--TTAAAGTATTAACA--CATTTATGT--C-CAGCTTCAT----A-TTA----GATT-CAC-TCGGCCCGGAA-AGT-CAGC---AGGAT-AT---AAAACTATATTGTGCTT-GCTAGT-CCT-TCAT-GAAAT-ACA--AGT--GATAA-ACA--CCTCATTT-TGGATA-ATCTGCA--TGA------TGAAG-AAAAGAG---TCTGGCAACATTCTTG------GAAACAACAAA------TGAA-AATAAT-ACATTACAATTATGGTAT-ATTTATATAAACAACAGCTAGATCC-TCACG-CCA-TA-----TGGCTATA-G-TGCCA-AAATG--GCATTTG-TGGGGG-CCAAATATG---TTA--A-AT-CGGAGTG--GTTATAT-----CAT--TATTTAAAACAACAAGAGGA--TG-A-TGGAAA-TCTCACAGAATT-AAATAAA-TTAAAAA-TCAAA-CA-A-AAGAATA---TTGAGAGTCTTAATGTATAAATAAGATCACACTTCTAC-----ATTTTACA-TTCCATTTCAAA--TGGACTCGGTAGTAGGAAAGCCG-CGCCG-AC-GAGGGCC-TT-CGTCCGGAG-TCCTCGTCTT--GCAC--AAAAATTCATTAATCTTCAGAAA--TATTCGTCGAGG-TTGATC-TAA----TACTTGGAAACGGCCCAAGTCCAAATAATAAATATTATGCATCGATGAATCATCGGAAGACTCA-----AG--GGAAGACCA----GTCCAATATTAACAAAATCTCTCTGAGATTGAAAAATCA-TCAATCTATGAAATACACAGTAAACAATATCTTTACTCATATAACACAT---CTGGATATCC-TTTAAAGAA-CAGC--AG--CT-ACATA---TAC-ATC-CA---TT-CTTTG-TC-CACTGA--AACTGTCAT-TTT--ACAG-CAATCAA-A-GC-GCAA-TCCTG-AAT-CTTGTT--A-AAACGCACGC-CAT----CCT-TGCACA-G-AGTT-ATC-G-TC-CTTT---TTATTT-TAAATATGACGCA-TAACACATC--C--GA-TGCTTTTTTT---GAACCC---GATC-G-AT-TAAA-TGACAC-GCAATATCTTTCAAAAAC-TAA-TT-GA-TACATTGTTCT-T-TC-AACGGTTA--TATGA--ATAA-TTGTATTGAT--TTCC--CTA-TTG-ATTT--CTGAT--TGAA---------AATTAT--AAA-----TCAAGTTG-ATT------TAAATAA-TTTA--AACTTTGC------AATATG-TATGTTAATT-C--ATAA--ATAC-----TTT--CTTATA--GTAACGAGTATACAAAAAAGAAAAAAC-----AAAAAAAAAA-A--AAAAA-AAAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAATT-A--AA-ATTTCATACTGAAACTTTATA-TG-ATATATATATATATTAATATATTATATTATATATAATATTG-T---AAGCAAAGCTACATGTAG------CTTGCACTTGTCCAG-T-TTGC--AAA-GTTAG----AT-ATAT----AGAGG----ACC----AAG-TGGATTGAAACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTA-AACT--GCTA----A---G-TG-AAACTT--GC-TAAG-AAT------TAACT----GC--TTATACTGAA--TTC--TTAGC-AG-TTT-ACAAATAGTAGTT-AAAA-C-CACAA-CTGCTTGGA-A-CTG--TTAGGAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAGA-A--CT--GCC--TAGC-TACTG---CTAAATATA-AG--CA-GTT-TATT-TTTCCTGGGct
gi|7 : ttaaagtgtgagatatgatattgcgaacccattcTCCTTTAACCTTCC-TTAGCCT-TCCCTTTCTATTCTGGCAA--GTGATAA-ATTA-TCA-G-AAAATTAAGTC-ATGTTCA-TGGCA-GTTTT---TCTTTACGCCTTACCA-GTTTTCGTTAAGC-----ATGTA---CT---GG----AGCAG-TTATTTTCATAGCG-AAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAGC-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTGC-TAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCA-GGTGT---TAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAATCAATAGGAAAGTCTAATA----AT---GGGA-AA-AAAAAAAAAAAAACAACCAAGGAAAATATG-AAATT-GTAAATTAAATTATTTA--TCAA--CATTT-TTGTTTCC-TTTCAGACCAACAT-AATTTA--CATTTTTTT--CCCCAAACAAATT--TGGAAAAGAG---AAACT-AGTGAA--TGTTGACTAAAAT-TATGAAACAAAATTTTCATTTA-A-TTCG-AGTTGGTAA-TATATATGGTAATACAATGATA--ACATCC-CAA-TGAACTTCCAG-AGAATAATTCAAACACTCAGT--AATG-A-TT---AAATTCAA-AC-AC--TGAAA-ATTGAT-GAAACGC--AGATAA-CTGC---AGAAATTCT-TCGAAT--AT--AAAGCTGTAAAATAT-A---ATATC--ATTCAA-----CTTGT-TTCAAATAATAATA-TTCCAAC----ATTACAAC-GATAA-G--T----TT---ATCC--A--CG-A-----ATAAATCCAACATa
gi|6 : tagtttTCCTTTAACCTTCC-TTAGCCT-TCCCTTTCTATTCTGGCAA--GTGATAA-ATTA-TCA-G-AAAATTAAGTC-ATGTTCA-TGGCA-GTTTT---TCTTTACGCCTTACCA-GTTTTCGTTAAGC-----ATGTA---CT---GG----AGCAG-TTATTTTCATAGCG-AAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAGC-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTGC-TAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCA-GGTGT---TAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAATCAATAGGAAAGTCTAATA----AT---GGGA-AA-AAAAAAAAAAAAACAACCAAGGAAAATATG-AAATT-GTAAATTAAATTATTTA--TCAA--CATTT-TTGTTTCC-TTTCAGACCAACAT-AATTTA--CATTTTTTT--CCCCAAACAAATT--TGGAAAAGAG---AAACT-AGTGAA--TGTTGACTAAAAT-TATGAAACAAAATTTTCATTTA-A-TTCG-AGTTGGTAA-TATATATGGTAATACAATGATA--ACATCC-CAA-TGAACTTCCAG-AGAATAATTCAAACACTCAGT--AATG-A-TT---AAATTCAA-AC-AC--TGAAA-ATTGAT-GAAACGC--AGATAA-CTGC---AGAAATTCT-TCGAAT--AT--AAAGCTGTAAAATAT-A---ATATC--ATTCAA-----CTTGT-TTCAAATAATAATA-TTCCAAC----ATTACAAC-GATAA-G--T----TT---ATCC--A--CG-A-----ATAAATCCAACATtatcatgttttcgtgtactcatttgtatttctagtccatctctacacagacacgacgatcaaagt
gi|18 : tagtttTTAAA-C-A-GTTCCA-AACA-GTTGTGGGTTTT-A----CTACTAA--T--TGT-AAGCTGCTAA-GAA---TT--CAGTATAAGCAG-TTATTTCTA--GCAGtatcatgttttcgtgtactcatttgtatttctagtccatctctacacagacacgacgatcaaagt
gi|21 : agattatatgtatttaagcttgcatttttccagtttgcgaagtttaaattaggagtaaatagattgatcgaactgttgtcttgtgagctaaaCCCTATCAAAATCATG-TGT---AAATA--AT-CTATGGAA-TAAGCAAT--ACACTGCTCAA-CAATAGGAGAG-TT-ATA-----------GA-AA-G-----AAACAAACAACA-AGAAAAC-A-A-AAATTGTT-AATT-AATTTTTTA--TC-A--CATTC-TTA-TTTCATTTAAGAAC-ACA-AACTTTA--CA-TTTTTT--aaactgccaaataaactcttaactgctaaagataagcagtactgtttattttgccttgggta
gi|3 : gctaatatacaatttcaTCCAGGAA--TTATTC-AA-ACTCATT-AAATG-A-TT----AATTCCATACGAC--TG-AAGATTACTGGAAACCCTCAGATAAACTGCCCCAGAATCTCT-TCGAA---AT-AAAAGCTGT-----GT-AGT-ATATG--ATCC-ATATAACTTGT--C--ATCTTATAGAATTACAGTCATAATC-CAA-GAACAACGTTCAGATTTT-AGTCC--AAACATA-----AT-AATCC-ACACACTTGTCAGTT-CCGTCCTATTTTTTATGCATAG-TTCA-GAACTCTGAGTGCGCCG-ATACA-AAGTCGTGAAAT------CA--CATTT--GT--CGCAGTCTCTT----CATAATTCTGATGTCACGTCGACCCGCAA-TGCGCAAGGTAAGGATAAT---AAGACT--AATGTGC------AAT-TCT-TCATT----TCACAA-AGTT-GATAA-ACA-TCC-CATTT-TGC-TA-ATCTACA--TGACT-CCACGAAG-AAAAGA-GC---TGGCAACACT-CTG------AA--AAAGAAATAAGAATTGAAAATAAT-ACA--A------TGATATTAATTT-ATAA-CAA-AGCT--------TATAAC-AATAT-TATGGGC--TA---TG------ATGCAACATTTGTCGGGGGTCCAAATAT---TTTA--ACATACGGAGTGT--TTATATATAGTCAT--TA----AAACAACA-GAGGAGATG-AATGCGAT--CTCACAGAATTTCAATACAATAATAAA-TCCAACCA-AGAA--ATAA--TTGAG-----TA------A---GAGGTCCCAACTCTAC-----ATTTTAC--TTCCATTGCAAAAATGGACTCGGT-GTAGGA----CG-CGCCGCACCGAGGGCC-TTTCGTCCCGGGGTCCTCGTTCT--GCAC--AAAAAT-CATAA-TCT-CAAAAA--TATTCGTCGAGGCTTGATC-TA-----tc
gi|4 : cgTCC-AACACTCA-T-AA-TG-A-TT----AATTCCA-AC-ACATTG-AA-ATTGATGAACACC---AGATAATCTGC---AGAAATTCTTTCGAATTAAT--AAAGCTGT----AGTTA-TTATATTCAGTTC-A-----CTTGT-TC--AATAATTACAGGT---AT----ATT-C--CCAACAA-C--C-G--TTA-GGTTTATC--CA-A-----AT-AAATC-ACATTC-----GGTT-CCGTCC-ATTCTTT--TTGCAAGTTC-CAAACT---AGTGC-AT-----CAAAAGT--TGAAA-------CATACATTT--GTTCCGCAGCTTCATTATTC-TGA-------TTCAC-TCGGCCCGAAAGAGT-TAA----AGGA--AT--AAGAACTATGGTGCA-------AGTTCCTCTCATTT---TCACA--AGTT-GATAACACATGCC-CATTTATGGATA-ATCTACA--TGACTTCCACGTAAGAAAAGA-GCCCTAGGCCAAACTCTTGAAAAAAGA---AATAAA-----ATTGAAAATAATCACA--T-GGTTATAAT-T-AATTT-ATAA-CAA--GTTATA---------AACAATA----TTAATGGTATGGTGC-AGAAATGCAACATTT--TGGGG-TCCATAAATA--TTT--TACAT-CGGAGTG--GTTATATA----TATCTTA----AAACAACA-GAGGA--TGGAATGCGATATCTCACAGAATT-AAATAAA-TTAAAAA-TCAA--CACA-AA--ATAACCTTGAG-----TA----------AGGATCC--ACACTACTAACAATTTTACA--TCAGTTTCAAA--TGGA-TCG-T-GT-GGA--GCCGGTTCCG-CC-GAGGGCCATT-CGTCC-GGG-TCCTCGTCATTAGCAC--AAAAAT-CATTAATCT-CAAAAAAATATTCGTCGAGGCTTGATAATA-----TACTTGAAGACGTGTCCGACAAGTCCAGTAATGAATATAGCTTCGACGAATTCG-GAAGA---ACTCAGAA--GG--CGACATCGCGTCAAA-----ACAA--TTTCG---TGAG---------A-TCAGTCTATGAA-TACACAGTAAA-A-TA-CT-TACTTA------ACAT---CTGGATATCC-TCTATAGAA--AGC--AGACCT-ACATA---TAG-ATC-AAATATT-CTT-G-TCGCACTGGATGACTGTCAT--TTTA-CAG-CAATTCA-AAGC-GCAA-TCCTG-AAT-C-TGTC--A-AAACGCGCGCCAAT----GCTATGCACA-G-AGTTA--T-G-TC-TTTT---TAA-TT-TGAAT-TGACGCAATAACACA-CGCC--G--TGCTTTTTTTTTAAA--CCCGCGATCCGCAC-TAAA-TGACAA-G-AATATCTTTC-AAAACTTAA-TT-GAATATG---TTCTGT-CC-AACGGT--ATTATGAT-ATAC-T-GTATTGAT--TTGC--CTAATT-CATTT--CTGGTTTTGAAA--------AATTA---TAA-----TCAAGTTG-ATTTTTTTATAAATAATTTTA--AAC-TTGC------AATATG-TATGTTAATT-C--ATAA--ATAC-----TT----T--TA--G-------T-------------AA---------------------------------------ATA-CAT--GTAG-TACAAAATTTTCACAAA-T-A--AA-ATTTC----------------------ACA---ATATATT-------------------------G-T---AAGC-Tatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|5 : aagaagcttgtT--TA----AAACAA-A-GAGGA--TG-A-TGCGAT-CCTCGCAGAATT-AAATAAATTTAAAAAATCAAAACA-A-AA--ATAA--TTGAG-----TA------A---AAGATCCAAATCGTAC-----ATTTTACA-TTCCATTTCAAAA--GGACTTGGT-GTAGGA--GCCG-CGCCG-AC-GAGGGCCCTT-CGTCCCGGG-TCC-CGTCTT--GCACCAAAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATC-TAATAATTCGAAGACGGCGACAAGTCCAAGTATGAAATATTAAGCTTCGAGCGAAATCTTCGGAAGA---A-----ACTCAA--GAAGG----CCCCAA-----ACAAAATCTCGCTGAGATTAAAAAATCAATCAGTCTATGAAATACGCAGTAAA-A-TA-CT-TACTCATATAACA--T---CTGGATATCC-TCTATAGAAACAGC--AG--CT-ACATA---TAG-ATC-AA---TT-CTT-G-TC--ACTGA--GACTGTCAT--TTTA-CAGGCAATCAATAGGC-GCAA-TCCTG-AAT-C-TGT----CAAACG-GCGTCCAT----GCT-TGCACAAG-AGTTA-TC-GGTC-CTTT---TTA-T---GAAT-TGACGCA-TAACACA-C--CC-GAATGCTTTTTTT---GAA-CC---GATC----C-TAAA-TGACAC-G-AATATCTTTC-AAA-C-TAAATT-GAT-ATAGT-T-CTGTTCC-AACGGT--ATTATGAT-ATATATGGTATTGAT--TTTG--CTATT-GCATTT--CTGGGT-TGAAA----------TTAT--AAA-----TCAAGTTG-ATT------TAAATAA-TTTA--AACTTTGCA----AAATATGTTATGTAAT-T-C--AT----ATAC-----TTT--CT--TA--G-------T-------------AAATCAAAAAAA------AA-A--AAAAA-AAAAATC-T-TATA-AAT--GTAGTTACAAAATTT----AAA-TAA--AA-ATTTCACAA--------TATA-Ttggaatgttagaaaaactgcaaataatctcctttaaacgtgccaaagaaactgctaaaataagcagttacatttttccttgggttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|25 : gT--TA----AAACAACA-GAGGA--TG-AATGCGATATCTCACAGAATT-AAATAAA-TTAAAAA-TTAAA-CA-A-AA--GTAA--TT-AT-----TA-TAA-TA--TAAGATCCCAACTCTAC-----ATTgtaaggcttggaaactgttagaaactgccaaataatctcttaactccaaagaaactgcctaaataagcagttcattttccttggtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|29 : ATGCGAT--CTCACAGAATT-AAAGACA-TTAAA-------------------TAA--TTGAG-----CA---T-TG--TAAGATCCCAACTCTAC-----ATT
gi|3 : TAAAAAACA--GTAAA-A-TGACTGTA---AAATTAA-CTTTATCT---TATTCGCCTATCGAA-CAGCCAAG--CTTAC-TAGTCTAGGATCCAA---TTGCTTTGATC-CACT-A--GACTGTCAT-TTCTA-CAG-CAATCAA-AGGCCGCAATTCCTGTAATGC-TGTCCAATAAACGCGCGACCAT----GCATTGCACA-GTGGTTA-TC-G-G----------TA-TT-GAA------CGCA-GAAAGCA-C--CTCGAT-GCGTTTTTT---AA--CCA--GATC-G-ACGTAAAATGACAC-G-AATATCTTT--AAAAC-TAA-TTTGAT-ATAGT-T-CTGTTCC-AACGGT--ATTATGAT-ATAT-TG-TATTGAT--TTTTGTCTAATTGCACTT---TGG---TGAAACTGTTGTAAATTATATCAA-----T-AAGTTG-ATT------TAAATAA-TTTATAAACTTTGC-----AAATATT-GATGTTAA-TTC--ATAA--ATAC-----TTGG-CTA-TA--GTAAAT--T-------------AAATT-----AA------AA-A--AAAAA-AAAAATCGT-TATA-TATCAGTAGTTACAAAA--TG-G-AAA-T-ACCAATATTTC--AC--------CAC--CA-ATATA---TTTTAGG-------------------------GAT---AAGC-T
gi|26 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgttttttttttA--GACTGTCAT--TTTA-CAG-CAATCAA-AAGCAACAAAAC----AAA-A-TG-C--A-AAACGCGCGC-CATAAAAGCAGGGCACA-G-AGTT-ATCGG-TC-CTTTCTCTTA-TT-tggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|17 : ATC-G-TCTCTTT---CTT-TTGTAAAT-TGACGCA-TAACACA-C--CC-GAT-GCTTTTTCT---AA--CCC--GATC-G-AC-TAAA-TGACACTG-AATATC-TTC-AAAAC-TAA--T-GATAAAAG--TTCTGT-CCAAACGGT--ATTATGAT-ATAT-T-GTATTGTATTTTTC--CTATTTGCATTTTCCTGA---TTAAA-------AATTTAT--AAATTTGTTCAAATTGTATT------TAG--AA-TTGA--AA-TTAGCTAAAGAAATAAT-TATGTTt
gi|10 : ttCGAGTCG-ATT------TAA-------TA--AACTT-GC-----AAATATA-TATGTTAA-T-CTCATTA--AAACCAAAGTATAACT--T---GT------A-------------AGATT-----CA------TA-ATCAAATA-TAAAATC-TCTATAGCGT--TTAGTTAC-AAATTTT-T-AAA-T----AA-ATTTTATAT--------GATATTATATATA---TTATATT-------------------------A-TATAAAGC-TAGCT-------A-------TTGCACTTGTCCAGTTTTTGCA-AAA-GTT-G----A--AT-T----AGG-G----ACT----AAA-TG--CTTGAACTGCTAGAATAATAAA------TAACTGGTATCTTGTAAA--GGTAGAT-----CT-----A---GTTG-AAACTT--GC-TAAG-AA-------TAA------GC--TTATACTGAA--TTC--TTAGC-AG-TTT-ACAAGAAGTAG-T-AAAA-C-CACAA-CTGTTTGGA-A-CTG--TTAGA--A----ACTGCCAAATA--AT----CTC--AT---AAC-TGCCCAAAGC-ATTT---GCC-TTAGCAAACTG---CTAAA-ATA-AG--CA-GTT-CATT-TTTCCTTtgaaaattttc
gi|24 : TA--AACTTTAC-----AAATATG-TATGTTAA-TTC--ATATTTATAC-----TTT--AT--TACAGTAACGG-T-------------AAATC-----AA------AATA--AAAAATAAAAATC-T-TATA-CAT--GTAGTTACTAAATTTT-A-AAA-T-A--AA-ATTTCATAC--------
gi|14 : A---ATAAAT--------------------------G-C---AAGC-TAGTT-------GTGAGATCTGGCTCTTAT---G-TGTT--AAAAATGCTAGCCTTATGAT-A----ACCAGTTCCACTTTGCAAA--GAAT-TGAACTGCT----T-----ACATGTATAACTGGTATCTTGT-GA--GGTG-TACT--GCT-----A---G-TA-AAA-CT--GC-TAAG-AAA------TAACT----GC--TTATACTGAA--TTC--TTAGC-AG-TTT-ACAAGTAGTAG-T-AAAA-C-AACAA-CTGCCTGGA-A-CTG--TTAGTA-A----ACTGCCTAATA--AT----CTC--TT---AAC-TG-CCTAAGA-A--CT--GCCTATG---AACTG---CTAAA-ATA-AG--CA-GTT-CATT-TTTCCTTGG
gi|18 : ttattctaaataacttttctaactcgatcattcaataaaaaaaagtttagaattttttttttctttcattagactggaatttgcaaa-------G------CTTGCATTTTTCCAG-T-TTGC-GAAG-TTTAA----AT----T----AGGAG------T----AAA-TAGAT-TGATC-G--------------------AACTGTTGTCTTGT-GA--G-----------CT-----A--------AA--CT--GC-TA-G-AAA------TAACT----GC--TTATACTGAA--TTC--TTAGC-AG-CTT-ACAATTAGTAG-T-AAAACC-CACAA-CTGTTTGGA-A-CTG--TTTAAA-A----ACTGCCAAATA--AA----CTC--TT---AAC-TG-CTAAAGA-g
gi|8 : agattatatgtatttaaTGCACTTGTCCAG-T-TTGCA--AA-GTTAG----AT-AT-TTATTAGGA------CT----AAA-TGAAT-TGAACTGCT----T-----T------TAAAAAATATA--AT-AACTGATA-GACTCAGCTTAATAA---G-TG-AAA-CT--GC-TAAG-AAT------TAACT----GC--TTATAATGAA--TTC--TTAGC-AA-TTT-ACAAGTAGTAG-TAAAAA-C-CACAA-CTGCTTGAA-A-CTGTTTTAGAAAA----ACTGCCGAAGA--ATAA--CTCAATT---AAC-TC-CCAAAGA-A--CTTGGCC--TAGC-AACTG---CTAAA-TGATAA--CA-GTT-CATTTTTTCCTTGGtaagcagtactgtttattttgccttgggta
gi|28 : AG----AT-AT-TT---AATAC----ATT----AAAATAAAT-TGAACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTA-CACT--GCT-----A---G-TGAAA--CT--Gagttagaactctgtacagaaagttccagagactttttgttgcacatcattatcaagaagttcctgaaaaagcaatcataatgtccgtacatcttgtctgaatatatcatgtgtaggactttttagaataattgaatgggcgggacttataacttctttatttcaattcatagaagtccgtgaaaaaaccaaaggaaagtcctgtaaaatgaccactgcaggtgtagtgggaatttgcaggaccattgagccttcaagttcctacaaaagtcacacttaatggttactggttttaaggacaaaatgcagacataagaagtcctgaattatcccactgcatttagcagagaaggacggaaaaaaggagtctcatggatcttccaggaatcctaaagatagtcaagtaaagttgggaagtatttttgtggagg
gi|20 : TGAACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTA-CACT--GCT-----A---G-TG-AAA-CT--GC-GAAG-AAA------TAACT----GC--TTATACT--ATATTC--TTAGC-AG-TTT-ACATGTAGTAG-T-AAAA-C-CACAA-CTGCTTGAA-A-CTG--TTTAAA-A----ACTGCCA------------C--------------------AGA-A--CT--GCCTATAGA-AACTG---CTAAA-ATA-AG--CA-GTT-CATT-TTTCCTTAG
gi|1 : taaatTGGT----T-----T------TAACTACTAT-TTGT-AA--A------CT--GCT-----A---A--G-AA--TTCAGTATAAGCAGT------TAATT-----C--TTAG-C-AAGT-TTCACTTAGC-AG-TTT-ACgt
gi|19 : ttaaagtgtgagatatgatattgcgaacccattcagtgaggcagttgtagcagttattaagccttcccagttgttacttgcctaggcgtttattttagccgttccttaccttccttagccaatcttttctattctggaagtaataaaattacatttaaaataagcgaatacagagagatatttttctttagccttaccagttcgtaagcagtactgagagcagcttattttcagcgaaaaatgtaatgagattgaggaaactgctagcagactgcttaggaatctgctaagtcattcatataattggtagtgtctaatgaatattcaggcaatacaatgaggatttactagtagcaatgctagcaataggagatttacaattcttcacattaaaacactattaaaacagtgtgttccagaatactatggtattagcaattaacactattcaaagtttatatctaatggggaaataataataaaaaaaaaacaatcaaagaaaatataaattgtaaattaattatttagttcaatcatttttgttcatttcagaacacataaatctaattattttttttcccatatcaaaaattggaaaagagaaaaactaatgaatgttgactaaatttaatgaaacaaaaatttcatttagatttcgtctattgtaagtatatataatacatgatacatccacattgaacttccagttattcatctcagttaaacgcacttttaaaattccaacactgaattgatgcaaaaccagacaactgccgaaattcttcggatcaatataaagctgttgtatattattcactagtatcaataaatattgatccaatattcacaaccaagcagttttaatccacaatatccacaatccactacagttccgtcatttttttattgcatcacaactagtgcctatgtttctatgtttaaagtattaacacatttatgtccagcttcatattagattcactcggcccggaaagtcagcaggatataaaactatattgtgcttgctagtccttcatgaaatacaagtgataaacacctcattttggataatctgcatgatgaagaaaagagtctggcaacattcttggaaacaacaaatgaaaataatacattacaattatggtatatttatataaacaacagctagatcctcacgccatatggctatagtgccaaaatggcatttgtgggggccaaatatgttaaatcggagtggttatatcattatttaaaacaacaagaggatgatggaaatctcacagaattaaataaattaaaaatcaaacaaaagaatattgagagtcttaatgtataaataagatcacacttctacattttacattccatttcaaatggactcggtagtaggaaagccgcgccgacgagggccttcgtccggagtcctcgtcttgcacaaaaattcattaatcttcagaaatattcgtcgaggttgatctaatacttggaaacggcccaagtccaaataataaatattatgcatcgatgaatcatcggaagactcaagggaagaccagtccaatattaacaaaatctctctgagattgaaaaatcatcaatctatgaaatacacagtaaacaatatctttactcatataacacatctggatatcctttaaagaacagcagctacatatacatccattctttgtccactgaaactgtcattttacagcaatcaaagcgcaatcctgaatcttgttaaaacgcacgccatccttgcacagagttatcgtcctttttattttaaatatgacgcataacacatccgatgctttttttgaacccgatcgattaaatgacacgcaatatctttcaaaaactaattgatacattgttctttcaacggttatatgaataattgtattgatttccctattgatttctgattgaaaattataaatcaagttgatttaaataatttaaactttgcaatatgtatgttaattcataaatactttcttatagtaacgagtatacaaaaaagaaaaaacaaaaaaaaaaaaaaaaaaaaatcttatacatgtagttacaaaattttaaaattaaaatttcatactgaaactttatatgatatatatatatattaatatattatattatatataatattgtaagcaaagctacatgtagcttgcacttgtccagtttgcaaagttagatatatagaggaccaagtggattgaaactgcttataactggtatcttgtaag----T-----A------TA--TGGTGTCTTGT-AA--AGTG-GACT--GCT-----A---G-TG-AAA-CT--GC-TAAG-AAA------TAACT----GC--TTATACTGAA--TTC--TTAGC-AG-TTT-ACAAGTAGTAG-T-GAAA-C-CACAA-CTGCTTGAA-T-CTG--TTTAAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-TCAAAGA-A--CT--GCC--TATC-AACTG---CTAAA-ATA-AG--CA-GTT-CATT-TTTCCTTGGcaactgcttggaactgttaggaaaactgccaaataatctcttaactgccaaagaactgcctagctactgctaaatataagcagtttatttttcctggga
gi|10 : CT--TCT-----T---G-TA-AA--CT--GC-TAAG-AAT------TCAGTATAAGC--TTA---------TTC--TTAGCAAG-TTT--CAACTAGga
gi|14 : cgagtcgatttaataaacttgcaaatatatatgttaatctcattaaaaccaaagtataacttgtaagattcataatcaaatataaaatctctatagcgtttagttacaaatttttaaataaattttatatgatattatatatattatattatataaagctagctattgcacttgtccagtttttgcaaaagttgaattagggactaaatgcttgaactgctagaataataaataactggtatcttgtaaaggtagatCT--ACT-----T---G-TA-AA--CT--GC-TAAG-AAT------TCAGTATAAGCAGTTAT--------TTC--TTAGC-AGTTTT-AC---TAGCAG-T-ACAC-CTCACAAGtagtaaaaccacaactgtttggaactgttagaaactgccaaataatctcataactgcccaaagcatttgccttagcaaactgctaaaataagcagttcatttttcctt
gi|19 : ttattctaaataacttttctaactcgatcattcaataaaaaaaagtttagaattttttttttctttcattagactggaatttgcaaaaataaatgcaagctagttgtgagatctggctcttatgtgttaaaaatgctagccttatgataaccagttccactttgcaaagaattgaactgcttacatgtataactggtatCT--ACT-----T---G-TA-AA--CT--GC-TAAG-AAT------TCAGTATAAGCAGTTAT--------TTC--TTAGC-AG-TTTCACTAGCAGTtagtaaaacaacaactgcctggaactgttagtaaactgcctaataatctcttaactgcctaagaactgcctatgaactgctaaaataagcagttcatttttccttggg
gi|20 : tatatggtgtcttgtaaagtggCT--ACT-----ACATG-TA-AA--CT--GC-TAAG-AATATAGTATAA------GCAGTT-------AT-TTC--TTCGC-AG-TTTCACTAGCAGT-G-T-Atagtgaaaccacaactgcttgaatctgtttaaaaaactgccaaataatctcttaactgtcaaagaactgcctatcaactgctaaaataagcagttcatttttccttggga
gi|23 : taaattgaactgcctataactggtgtcttgtaaag-CTGAAT-T-C--TTAGC-AG-T----CAAGTAGTAG-T-AAAA-C--ACAA-CTGCTTGGA-A-CTG--TTAGAA-A----ACTGCCAAATA--AT----CTC--AT---AAC-TG-CCAAAGA-A--CT--GCCT--AGC-AACTG---CTAAA-ATA-AG--CA-GTT-CATT-TTTCCTTGGtaaaaccacaactgcttgaaactgtttaaaaactgccacagaactgcctatagaaactgctaaaataagcagttcatttttccttaggt
gi|27 : taTACC-AG-TTT-ACCC-TAGTAG-T-AAAA-C-CACA-GCTGCTTGGA-A-CTG--TTTAAA-A----ACTGCCAAATA--AT----CCC--TT---AAC-TG-CCAAAg
gi|4 : GCTTGGA-A--TG--TTAGAAAA----ACTGC-AAATA--AT----CTC--CTTTAAACGTG-CCAAAGA-A-----------------ACTG---CTAAA-ATA-AG--CA-GTTACATT-TTTCCTTGG
gi|5 : aagaagcttgttccaacactcataatgattaattccaacacattgaaattgatgaacaccagataatctgcagaaattctttcgaattaataaagctgtagttattatattcagttcacttgttcaataattacaggtatattcccaacaaccgttaggtttatccaaataaatcacattcggttccgtccattctttttgcaagttccaaactagtgcatcaaaagttgaaacatacatttgttccgcagcttcattattctgattcactcggcccgaaagagttaaaggaataagaactatggtgcaagttcctctcattttcacaagttgataacacatgcccatttatggataatctacatgacttccacgtaagaaaagagccctaggccaaactcttgaaaaaagaaataaaattgaaaataatcacatggttataattaatttataacaagttataaacaatattaatggtatggtgcagaaatgcaacattttggggtccataaatattttacatcggagtggttatatatatcttaaaacaacagaggatggaatgcgatatctcacagaattaaataaattaaaaatcaacacaaaataaccttgagtaaggatccacactactaacaattttacatcagtttcaaatggatcgtgtggagccggttccgccgagggccattcgtccgggtcctcgtcattagcacaaaaatcattaatctcaaaaaaatattcgtcgaggcttgataatatacttgaagacgtgtccgacaagtccagtaatgaatatagcttcgacgaattcggaagaactcagaaggcgacatcgcgtcaaaacaatttcgtgagatcagtctatgaatacacagtaaaatacttacttaacatctggatatcctctatagaaagcagacctacatatagatcaaatattcttgtcgcactggatgactgtcattttacagcaattcaaagcgcaatcctgaatctgtcaaaacgcgcgccaatgctatgcacagagttatgtctttttaatttgaattgacgcaataacacacgccgtgctttttttttaaacccgcgatccgcactaaatgacaagaatatctttcaaaacttaattgaatatgttctgtccaacggtattatgatatactgtattgatttgcctaattcatttctggttttgaaaaattataatcaagttgatttttttataaataattttaaacttgcaatatgtatgttaattcataaatacttttagtaaatacatgtagtacaaaattttcacaaataaaatttcacaatatattgtaaGCTTGGA-AACTG--TTAGAA------ACTGCCAAATA--AT----CTC--TT---AAC-T--CCAAAGA------------------AACTG---CCTAA-ATA-AG--CA-GTT-CAT--TTTCCTTGGgttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|3 : gttaaaacaaagaggatgatgcgatcctcgcagaattaaataaatttaaaaaatcaaaacaaaaataattgagtaaaagatccaaatcgtacattttacattccatttcaaaaggacttggtgtaggagccgcgccgacgagggcccttcgtcccgggtcccgtcttgcaccaaaaaatcattaatctcaaaaatattcgtcgaggcttgatctaataattcgaagacggcgacaagtccaagtatgaaatattaagcttcgagcgaaatcttcggaagaaactcaagaaggccccaaacaaaatctcgctgagattaaaaaatcaatcagtctatgaaatacgcagtaaaatacttactcatataacatctggatatcctctatagaaacagcagctacatatagatcaattcttgtcactgagactgtcattttacaggcaatcaataggcgcaatcctgaatctgtcaaacggcgtccatgcttgcacaagagttatcggtcctttttatgaattgacgcataacacacccgaatgctttttttgaaccgatcctaaatgacacgaatatctttcaaactaaattgatatagttctgttccaacggtattatgatatatatggtattgattttgctattgcatttctgggttgaaattataaatcaagttgatttaaataatttaaactttgcaaaatatgttatgtaattcatatactttcttagtaaatcaaaaaaaaaaaaaaaaaaaatcttataaatgtagttacaaaatttaaataaaaatttcacaatatatgtaagGCTTGGATA-CTGG-TTAGAAAAGAAAACTGCCCAATATTATAGTCCTC--TT---AAC-TGTCTATAGACA--G---G----TA---AACTGGCTCTAAG-ATA-AGCTCATGTT-CATT-TGTCCTTGGtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
7 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|9 ): AGCATTCATTTTTCGCTTCCGGTAACCCTGTAACAGAAAGTCCAAGCTTTTTGTTGCACATATACTTTTTAAATCACTATAGTTCCCTGAAAACAATATAGATGTCCTGCATTGTCTTAAATATATCATGTGTGAGACTTTAGGGAAATTTGAGGGACCTTATAACTTTTTATTTTCAATTCAGTTAAGTCCTGAAAACAAAAGAAAGTCCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTGCAGGACAAATTTGAGTCTACACAGTTTCTACAAAGTCACAACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTTCTGAATTTCCTTGCATTAGGACAGGAGAGATTAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATATGCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Unaligned ( gi|11 ): GTGCAAGACTTTTTGTTGCACATACTTTTATCAACAAGTCCTGAAAAGCAATGTAATATGTCCTACATTTTCCTGAATATATCATGTGTGAGACTTTTAGGAAATTTGAGGGACTTATAACTTTTTTTTAATTTCATCAGTAAGGTTCTGAAAACCAAAAGAAAAGTCCTGTAAAGACCTCTGCAGTGAGTAAGTGGGCCATTGTGCGAGGACATTTGAGTAATGTATTTGTCCTACAAGTTCCTAAAGTCACACTATGTTATGGGTATATTAAAGGATCAACTGCACAGGAATAAGAAGTCCTGAACTTATCCCAACTGCTAGGAGAGAGAAGTGGACTGGAAAAAGGAAGTCTGGGACTTCCAGGGATATTTCAAATTTCAACGAAGTGGGATTTATTTTTGGAGG
Unaligned ( gi|12 ): AATAAACGCATTCATTTTTCCTTGGGTAACCCTGTACAGAAAGTCCAAGACTTTTTGTTGCATCATATACTTTTTAATCACAAGTCCTGAAAAGCAATATAATGTCCTGCATTGTCTTAAATATATCATGTTGTGAGACTTTTAGGAATTTGAGGGACTTATAACTTTTTATTTCAATTCAGTAAGTCTCTGAAAACAAAAGAAAGTCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTTGCAGGACATTTGAGTCTACAAGTTCTACAAAGTCACACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTCATGAATTTCCTATGCATTAGGACAGGAGAGAAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATA
Unaligned ( gi|13 ): GCTTTTAGGACACCTCTGTACAGAAAGTCCAAGACTTTTTGTTGCACATGCTTTTATCAACAAGTCCTGAAAAGCGATGATAATGTCCTGCATTGTCCTGAATATATTCAGCTGTGAGGAACTTTTTAGGAAATTTGAGGACTTTTATTTCATCAGTAAGTCCTGAAAAACAAAAGAAAGTCCTGTAAAACCATCTGCTGTTGTAGTGGGAATTTGCAGGATATTTTGAGTAATTGTATTTTGTCCTACAAGTTGATATTCAAGGGCAAATTGCAGGAATAAGAGCCTGAATTATCCCACTGCTTAGACAGAGAGATAGTGGGACGGAAAAGGAAGTCTTCAGGATTCCAGGGATTATCCTTAAAATATTCAAGAAAGTGGGATAATTTTTTGGCAGGGA
Unaligned ( gi|15 ): AAGACAAAAGAAAATCCTGAAAAAATTAAACGACACATACATTGCCAGTCTGGTTGTTATTCGAAATTATGCAGGAATCCAATATTGATAGTTTCTTCACCAAGTTCCTACAAAGTCCATCATTTAAATGTTACTGTGCGAGTAGTTTTTAAGGACACATTAGTAAGACGAGGGATAAGTATAAGTCCCTGAAAAATAATCTAATGGAGCCACTGCTCAGATCTAGGACAGAGAGAAGTTATGAGGATATGTAGAAATAAAGTGGGAGTCCAGGGACTTCCAGAGCGATATCCTTTCAAAATATTCAGAATGACGAAGTACCTACAGTTGTGGATTTAGATTTTTG
Unaligned ( gi|22 ): ATGTTACTGGGATATTTAAGGAGAATGGCAGAATAAGAAGTCTGAATTATCCACTGCATTAGGACAAGAGACTCAGTGGACTAGGATAAAGGGAAGTTCAGACTTCCAGGGATGATTCCTTCAAATATCAGAAAGTGGGATTTATTTTTGGAGGG
Unaligned ( gi|30 ): GGGATATCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Alignments
lowQualScore : 11111111111111111111111111111111
lowQualScore : 1 33333333333333333 11 11 1111 11111 1 2 11 2 22 1 2222222 111 1111 11 111 1 1 2 1 1 2222 11 11 1 1 1 111 1 2222 222 1 11 222 111 1111 11 1 11 1 11 11 11 11 111 11 1 11 1 1 11 1 1 1 11 1 1 111111 11 2222 11 1 111 33333 3333333 1 11 22 2222222 22222222 11 11 11111111 1 33333333333 11 1 11 11 111 777777777777777777 1 1 11 1 11 11 11 111 33333 1 1 1 3333 22222222 1 5555555 1 1 44444444444 1111 11 1 33 1 1 1 11 11 1 1 1 2222 222222 1 2222222 1 333333 1 111 11 00000000000000000000000000000000 11 1111 222 222 1111 1 11 33333 1111 11 111111 111 6666666666666666666666666 11111 11 11 11 111 2 11 11 11 11 1 44444444 111111 1111111111 5555555555555555555555555 22222 11 11111 11111 22222222 11 11 11 111 1 2 1 11 22222222 111 11 111 111 1 11 111 1 111 1 1 1 222222222222222 111 11111 111111 11111 111 11111 1111 11 555555555555555555555555555555555555555555555 222222222 222 888888888888888888888888888 111 3333333 11 11 2222 22222222222222222 11111 1111 11111
lowQualScore : 6 3 7 1 22222222222222222 7 1 22 0 8 22 8 88 2222 99999 11 3 0 99 8 0 0 0 8 11 0 1111111 999 8 666 8 2222 88 666 6 5 0 0 0 0000 22 33 5 3 0 3 0 3 5 666 0 1111 4 88 8 555 0 8 66 55 8 5 0 11 111 0 5 0 444 1 7777 55 3 77 55 0 0 0 11 999 8 99 0 1 11 11 11 0 4 33 777 33 0 33 4 0 0 3 33 0 0 2 0 999 2 9 33 0 1 0 222222 1 7 3 2 44 6 5555 7 6 6 99 33 99 6 99 1 000 1 5 5 5 22222 7 77 5 1111111 5 55 5 5 2 33 55 6 6666666 99 6 88888888 88 00 66666666 5 55555555555 6 6 88 3 00 77 33 777 888888888888888888 0 0 33 0 33 33 33 2 777 55555 1 2 3 0 1 0 0 1111 22222222 0 555 6666666 0 0 66666666666 4444 33 0 77 0 0 3 0 33 33 11 0 0 0 6666 888888 0 1 6666666 0 666666 3 0 7 777 33 55555555555555555555555555555555 22 9999 2 999 3 3 444 4444 2 0 33 66666 99 4444 6 99 6 5 88 5 5 77 5 333333 111 77 1111111111111111111111111 0 44444 88 0 8 8 66 8 0 11 8 11 111 4 33 0 8 99 11 8 0 8 11 0 6 00000000 22 2 8 7 0 8 444444 7777777777 3333333333333333333333333 3 00000 22 8 99999 22222 8 11 1 99 6 66666666 1 7 6 9999 8 1 8 11 11 8 11 8 8 444 8 0 8 8 99 6 3 6 6 6 6 6 3 6 6 6 6 55 44444444 555 6 6 99 5 5 5 000 111 3 6 6 6 44 99 6 7 111 6 6 6 6 6 6 6 6 3 666 1 1 1 99 6 6 9 6 6 99 4 99 555555555555555 222 66666 5 666666 5 5 66 0 77777 5 333 77 1 77 44444 5555 5 55 666666666666666666666666666666666666666666666 555 5 77 9999 5 5 77 5 5 222222222 444 222 8 111111111111111111111111111 444 8 2222222 2 11 8 11 3 6 0000 777 5 2 5 5 33333333333333333 4 66 1 66 55555 4 8 9 4 4 4 4 4 3 3 77 4 1 6666 44 0000 44 555 3 3 3 44444 77 00000 555 77 3 44 3 3 3 3
lowQualScore : . . . . ................. . . .. . . .. . .. .... ..... .. . . .. . . . . . .. . ....... ... . ... . .... .. ... . . . . . .... .. .. . . . . . . . ... . .... . .. . ... . . .. .. . . . .. ... . . . ... . .... .. . .. .. . . . .. ... . .. . . .. .. .. . . .. ... .. . .. . . . . .. . . . . ... . . .. . . . ...... . . . . .. . .... . . . .. .. .. . .. . ... . . . . ..... . .. . ....... . .. . . . .. .. . ....... .. . ........ .. .. ........ . ........... . . .. . .. .. .. ... .................. . . .. . .. .. .. . ... ..... . . . . . . . .... ........ . ... ....... . . ........... .... .. . .. . . . . .. .. .. . . . .... ...... . . ....... . ...... . . . ... .. ................................ .. .... . ... . . ... .... . . .. ..... .. .... . .. . . .. . . .. . ...... ... .. ......................... . ..... .. . . . .. . . .. . .. ... . .. . . .. .. . . . .. . . ........ .. . . . . . ...... .......... ......................... . ..... .. . ..... ..... . .. . .. . ........ . . . .... . . . .. .. . .. . . ... . . . . .. . . . . . . . . . . . . .. ........ ... . . .. . . . ... ... . . . . .. .. . . ... . . . . . . . . . ... . . . .. . . . . . .. . .. ............... ... ..... . ...... . . .. . ..... . ... .. . .. ..... .... . .. ............................................. ... . .. .... . . .. . . ......... ... ... . ........................... ... . ....... . .. . .. . . .... ... . . . . ................. . .. . .. ..... . . . . . . . . . . .. . . .... .. .... .. ... . . . ..... .. ..... ... .. . .. . . . .
lowQualScore : 7 3 3 0 77777777777777777 3 0 88 8 0 00 2 66 6666 88888 88 6 4 66 0 8 8 0 0 00 6 6666666 222 0 888 0 2222 66 888 6 5 0 0 0 8888 55 88 5 2 0 2 2 2 5 222 0 2222 0 88 0 000 8 0 22 88 0 8 8 00 666 8 6 8 000 0 0000 66 8 22 00 8 8 6 00 666 0 00 6 0 44 44 00 8 0 88 555 88 0 88 0 0 0 2 88 0 0 5 0 000 5 2 22 0 2 0 888888 0 3 2 5 00 7 8888 3 7 7 22 00 22 7 22 4 000 7 7 7 7 11111 1 99 7 7777777 0 99 7 7 0 66 00 7 8888888 88 7 33333333 33 33 88888888 5 77777777777 7 7 33 3 00 77 00 555 555555555555555555 0 0 88 0 88 88 88 5 555 22222 0 5 2 0 0 0 0 2222 88888888 0 000 2222222 0 0 88888888888 8888 22 0 55 0 0 2 0 88 22 00 0 0 0 2222 888888 0 0 0000000 0 000000 2 0 0 555 22 55555555555555555555555555555555 55 5555 5 222 2 5 222 5555 5 0 88 88888 22 2222 7 22 7 0 66 7 7 99 7 000000 444 99 9999999999999999999999999 7 33333 88 8 0 0 22 0 8 00 0 00 888 0 00 8 0 00 00 0 8 0 00 8 0 44444444 00 2 0 6 8 6 666666 8888888888 4444444444444444444444444 8 00000 44 0 44444 66666 0 66 7 22 7 88888888 0 5 7 7777 0 4 0 00 00 0 00 0 0 000 0 6 0 0 22 7 7 7 7 7 7 7 3 7 7 7 7 88 22222222 000 7 7 33 7 7 7 000 444 3 7 7 7 88 22 7 3 777 7 7 7 7 7 7 7 7 3 222 3 7 7 22 7 7 2 7 7 22 0 22 555555555555555 777 77777 7 444444 0 7 99 4 55555 0 999 99 7 99 33333 0000 7 77 444444444444444444444444444444444444444444444 999 7 99 4444 7 7 99 7 0 222222222 777 000 0 222222222222222222222222222 000 0 5555555 5 00 0 88 8 7 8888 333 0 8 0 0 66666666666666666 4 11 0 11 66666 4 9 9 4 0 0 0 0 1 1 33 3 5 5555 22 8888 22 444 1 1 3 88888 99 88888 888 99 3 66 3 3 3 3
consensus : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTACTT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTTCC-TTAGCCTTCCCTTTCTATTCTGGCAAA-GTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACCA-GTTTTCGTTAAGC-----ATGTACT-G-GAGCAG-TTATTTTCATAGCG-AAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAGC-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTGC-TAGCAA----GGATTTACAANTTTTCACA-ATT-AAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAATGGG---AAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATTGGTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAGA---AA--CTAG-TGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TT-CGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAAT-GAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A--ATAA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-A-ATAATTATAGT-----TCCAATATT-AC-AACGA-CAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-CC----------G-AT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A--CTNAGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGAT-A-T---AA-AACTATANTGCGCTT--C-AGT-CCT-TCAT----T----T-CACA--A-GTT-GATAA-ACAT-CC-CATTT-TGGATA-ATCTGCA--TGACT-CCGCG-AAG-AAAAGA-GCCCT-GGCAACACTCTTG------GA-AACAA-A-----ATTGAAAATAAT-ACA--A-AATTATGGTAT-AATTTATA---ACAA-AGCTAGACCCC-CACGACCAATA----TTA--GGC-GTAG-TGC-A-AAATGCAACATTTG-CGGGGGTCCANATATA--TTTA--ACAT-CGGAGTG--GTTATATA----CAT--TA----AAACAACA-GAGGA--TG-AATGCGAT-TCTCACAGAATT-AAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTACA-TTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCCG-CG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGACGNNN-CAA-GTCCAAGT-ATGATAAATATTATGCNT-CGACG--AATC-TCGGAAGAA-----A--N--GGGAA---CG----GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATCA-T-CAGTCT-ATGAAATACACAGTAAA--A-T-A-C--T-TACTCATAT-AACAC-ATCTGGATATCC-TCTATAGAA-CAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TTT-A-CAG-CAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCACA-G-AGTTAATC-G-TC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-TAA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGAT-ATAT-T-GTATTG-A-TTTT--CCTA-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCATAC--------TATATAATATAT--AT-ATATT-------------------------G-TA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
Reference ( family-657 ) : CATGTCAAAGTGGAAGGCA-GTTTGNTAGCAGTTATTAAGCCTTCCCAGTTGTTACTTGCCTAGGCAGTTTATTNTAGCCGTCCTTTAACCTTCC-TTAGCCTTCCCTTTCTATTCTGGCAAA-GTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGACA-GTTTTTCTTTACGCCTTACCA-GTTTTCGTTAAGC-----ATGTACT-G-GAGCAG-TTATTTTCATAGCG-AAAAATGGTATAATGAGAT-GAAGAATAAACTNGCTTAGC-GACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTGC-TAGCAA----GGATTTACAAATTTTCACA-ATT-AA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAATGGG---AAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATTGGTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGANCAACATAAATTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAGA---AA--CTAG-TGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TT-CGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAAT-GAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAATG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A--ATAA--AG-CTGTAAA-ATGTATAT-ATC-A-TTCAACTTGT--TCCAA-ATAATTATAGT-----TCCAATATT-AC-AACGA-CAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTCGCA-GTTCACGAACT---AGTGC-CT----------G-GT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT----CTNAGATTTCAC-TCGGCCCGNAA-AGT-CAA----AGGAT-A-T---AA-AACTATANTGCGC------AGT-CCT-TCAT----T----T-CACA--A-GTT-GATAA-ACA--CC-CATTT-TGGATA-ATCTACA--TGACT-CCACG-AAG-AAAAGA-GCCCT-GGCAACACTCTTG------GA-AANAA-A-----ATTGAAAATAAT-ACA--A-GGTTATGATAT-AATTTATA---ACAA-AGCTAA------CACGACCAATA----TT---GGC-GTAG-TGC-A-AAATGCAACATTTG-CGGGGGTCCAAATATG--TTTA--ACAT-CGGAGTG--GTTATATA----CAT--TA----AAACAACA-GAGGA--TG-AATGCGAT-TCTCACAGAATT-AAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTACA-TTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCCG-CG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTT-GAAGACGNCN-C---GNNCAAGT-ATAATAAATAATATNNCT-CGNNN--AATCTTCGGAAGAA-----A--N--GGGAA---CG----GTCCAA-----ACAAAATC-TCGCTGAGAT---TGAAAAATCA-T-CAGTCT-ATGAAATACACAGTAAA--A-T-A-C--T-TACTCATAT-AACAC-ATCTGGATATCC-TCTATAGAA-CAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TTTTA-CAG-CAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCACA-G-AGTTAATC-G-TC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTAAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-TAA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGAT-ATAT-TGGTATTG-A-TTTT--CCTANTTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCATAC--------TATATAATATA---AT-ATATT-------------------------G-TA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGAAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAATTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|1 : AGTG--AGGCA-GTT--GTAGCAGTTATTAAGCCTTCCCAGTTGTTACTTGCCTAGGC-GTTTATTTTAGCCGTTCCTTA-CCTTCC-TTAGCCAATCTTTTCTATTCTGG--AA-GTAATAA-AATTA--CATTTAAAATAAGCGA-ATACAGAGAGATATTTTTCTTTA-GCCTTACCA-GTT--CGT-AAGC-----A-GTACT-GAGAGCAGCTTATTTTCA--GCG-AAAAATG---TAATGAGATTGAGGAA---ACT-GCT-AGCAGACTGCTTAGGAATCTGCTAAGT----CATTC--ATATAATTGGTAGTGT-CTAATGAATATTCA-GGCAATACAATGAGGAT-TTA-CTAGTAG-CAA---TGC-TAGCAATAGGAGATTTACAATTCTTCACA--TT-AAAA-CACTATTAAAA-CAGTGTGTTCCA-GAATACTATGGTATTA-GCAATTAACACTATTCAAAGTTTATA------TCTAATG--GGG---AAATAATAATAAAAAAAAAACAATCAAAGAAAATAT-AAATTG-TAAATTAA-TTATTTAGTTCAATCATTT-TTGTT--CATTTCAGAACA-CATAAATCTAATTATTTTTTTTCCCATATCAAAAATTGGAAAAGAGA---AAAACTAA-TGAA--TGTTGACTAAATT-TAATGAAACAAAAATTTCATTTAGATTT-CGTCTATTGTAAGTATATAT---AATACA-TGATA--CATCCACATT-GAACTTCCAG------TTATTCAT---CTCAGTTAAACGCACTTTTAAAATTCCA-AC-AC--TGAA--TTGATGCAAAA-CC--AGACAA-CTGC---CGAAATTCT-T-CGGA-TCAAT-ATAA--AG-CTGT-------TGTAT-ATT-A-TTCA-CTAGTA-TC--A-ATAAATATTGA-----TCCAATATTCAC-AAC---CAAGCAGTTTTAATCCAC-AATATCCACA--ATCCA-C-T----AC-----AGTT-CCGTCA-TTT--TTT-TATT-GCA---TCAC-AACT---AGTGC-CTATGTTTCTATG-TT-TA-AA-GT--ATTAA-CA--CATTTATGT--C-CAG---CTTCAT----ATTAGATT-CAC-TCGGCCCGGAA-AGT-CAGC---AGGAT-A-T---AA-AACTATATTGTGCTTGCT-AGT-CCT-TCATGAAAT-------ACA--A-GT--GATAA-ACA--CCTCATTT-TGGATA-ATCTGCA--TGAT------G-AAG-AAAAGA-GTC-T-GGCAACATTCTTG------GA-AACAACA-----AATGAAAATAAT-ACATTACAATTATGGTAT-A-TTTATATAAACAACAGCTAGATCCT-CACG-CCA-TA----T----GGCTATAG-TGCCA-AAATG--GCATTTG-TGGGGG-CCAAATATG--TT-A--A-AT-CGGAGTG--GTTATAT-----CAT--TATTTAAAACAACAAGAGGA--TG-A-TGGAAA-TCTCACAGAATT-AAATAAA-TT--AA-AAATCAA-A-C--AAAAGAATA---TTGAGAGTCTTAATGT---A----T-AAATAAGATCACACTTCTAC-----ATTTTACA-TTCCA-TTTC-AAA-TGGACTCGGTAGTAGGAAAGCCG-CG--CCG-A-CGAGGGCC-TTCGTCCG-GAGTCCTCGTC-TT--GCAC--AAAAATTCATTAATCTTCAGAAA--TATTCGTCGAGG-TTGATCTAATACTT-GGAAACGGCC-CAA-GTCCAA---ATAATAAATATTATGCAT-CGATG--AATCATCGGAAGACTC---A--A--GGGAAGACCA----GTCCAATATTAACAAAATC-TCTCTGAGAT---TGAAAAATCA-T-CAATCT-ATGAAATACACAGTAAACAA-T-A-TCTT-TACTCATAT-AACAC-ATCTGGATATCC-TTTAAAGAA-CAGC--AG--CT-AC--ATATAC-ATC-CA---TT-CTTTG-TC-CACTGA--AACTGTCAT-TTT-A-CAG-CAATCAA-AG--C-GCAA-TCCTG-AAT-CTTGT-TA--AAACGCACGCC--------ATCC-T-TGCACA-G-AGTTA-TC-G-TC-CTTT---TTATT-TTAAATATGACGC-ATAACACAT-C-CGAT-GC--TTTTTTTGAACC--CGAT-CG-AT-T-AAATGACAC-GCAATATCTTTCAAAAAC-TAA-TTGATACATTGTTC---TTTCAACGGT--TATATGA--ATAA-TTGTATTG-A-TTTC--CCTA-TTG-ATTT--CTGATT---GA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AA-TATG-TATGTTAA-TTC--ATAA--ATAC-----TT-T--CT-TATAGTAA---CGAGTATACAAAA-AAGAAAAAACAAAAA-AAAAAAAAAAAAAAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAATT-A--AA-ATTTCATACTGAAACTTTATATGATATATATAT-ATATTAATATATTATATTATATATAATATTG-TA---AGCAAAGCTACATGTAGCTTGCACTTGTCCAG--T-TTGC--AAAGTTAGATATAT----AGAGGACCAAG-TGGAT-TGAAACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAAACT--GCTA----AG-TGAAACTTGCTAAGAATTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAATAGTAGTT-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGGAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-TACTG---CTAAAT-ATA-AGC--A-GTT-TA-TT-TTTCCTGGG
gi|10 : ttaaagtgtgagatatgatattgcgaacccattcCGAGTCG-ATT------TAA---------TAAACTT-GC-----AAATATA-TATGTTAA-T-CTCATTA--AAACCAAAGTA-TAACT-T---GTAA----GATT---CATAA-TC---------AAAT-AT----------AAAATC-TCTATAGCGT--TTAGTTACAAATTTTT-A-AA--T-A--AA--TTTTATAT--------GATATTATATAT--ATTATATT-------------------------A-TATAAAGC-TAGCT-------A-TTGCACTTGTCCAGTTT-TTGCA-AAAGTT-GA-AT-T----AGG-GACTAAA-TG-CT-TG-AACTGCTAGAATAATAAA------TAACTGGTATCTTGTAAA--GGTAGAT----CT-----AGTTGAAACTTGCTAAGAA-TAA--GCTTATACTGAA-TTCTTAGCAGTTTACAAGAAGTAG-T-AAAA-CCACAA-CTGTTTGGA-A-CTG--TTAG--AA----ACTGCCAAATA--AT----CTC--AT---AAC-TGCCCAAAG-CATTT--GCCT-TA--GCAAACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTa
gi|14 : AAA--GAAT-TG-AACTGCT----T-----ACATGTATAACTGGTATCTTGT-GA--GGTGTACT--GCT-----AG-TAAAAC-TGCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CAACAA-CTGCCTGGA-A-CTG--TTAG-TAA----ACTGCCTAATA--AT----CTC--TT---AAC-TG-CCTAAG-AA-CT--GCC--TA--TG-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|15 : ttattctaaataacttttctaactcgatcattcaataaaaaaaagtttagaattttttttttctttcattagactggaatttgcaaaaataaatgcaagctagttgtgagatctggctcttatgtgttaaaaatgctagccttatgataaccagttccactttgc-CTGC---ATAA---TT-T-CGAA-T--A--ACAACCAGACTG-GCA-ATGTATGT-GTC-G-TTTAATTTTT--TCg
gi|16 : aagacaaaagaaaatcctCATGTCAAAGTGGAAGGCA-GTTTGCTAGCAGTTATTAAGCCTTCCCAGT------------------TTTATTTTAG-AGTTCCCTAACCTTCC-ATA-----------CTCTTCTGACAAA-TTGGTG------------GAAA--CAAG-CA-GTTCAA-AACA-GTTTTTC-TTA-GCTTTCCCT-GTTT---TTAACCAGTAGATCTACT-G-GAGCAG-TTATTTTC--AATG-AAAAAT-GTA-AATGAGAT-GAAGA--AAACT-GCTgaatccaatattgatagtttcttcaccaagttcctacaaagtccatcatttaaatgttactgtgcgagtagtttttaaggacacattagtaagacgagggataagtataagtccctgaaaaataatctaatggagccactgctcagatctaggacagagagaagttatgaggatatgtagaaataaagtgggagtccagggacttccagagcgatatcctttcaaaatattcagaatgacgaagtacctacagttgtggatttagatttttg
gi|17 : ttaaggtgacaaaatatgtatataaagtaaacacttcccataATC-G-TCTCTTT---CTTTTGT-AAAT-TGACGC-ATAACACAC-C-CGAT-GC--TTTTTCTAA-CC--CGAT-CG-AC-T-AAATGACACTG-AATATC-TTCAAAA-C-TAA--TGAT-AAAAG-TTCTGTCCAAACGGT--ATTATGAT-ATAT-T-GTATTGTATTTTT--CCTATTTGCATTTTCCTGATT--AAA-------AATTTATA--AATTTGTTCAAATTGTATT------TAG--AA-TT--GAAA-TTAGCTAAAGAAATAAT-TATGTT
gi|18 : tt-------GCTTGCATTTTTCCAG--T-TTGCG-AAGTTTAAAT---T----AGGAG--TAAA-TAGAT-TG-ATC-G--------------------AACTGTTGTCTTGT-GA--GCTAAACT--GCT-----AG---AAA------------TAACTGCTTATACTGAA-TTCTTAGCAGCTTACAATTAGTAG-T-AAAACCCACAA-CTGTTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AA----CTC--TT---AAC-TG-CTAAAG-A---T--A-----A--GC-AG-TA---CT----------------GTT-TA-TT-TTGCCTTGGtgaaaattttc
gi|19 : agattatatgtatttaa----T-----A------TA--TGGTGTCTTGT-AA--AGTGGACT--GCT-----AG-TGAAAC-TGCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-GAAA-CCACAA-CTGCTTGAA-T-CTG--TTTAAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-TCAAAG-AA-CT--GCC--TA--TC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGGgta
gi|2 : CATGTCAAAGTGGAAGGCACGTTTGGTTGCAGTTATTAAGCCTTCCCAGTT-TTACTTTCTTAGGCAGTTT--TATAGCAGTTCTATAACCTTCCCTTAGCCTTCT-TTTCTATTCTTGCAAAAGTAATAATA-TTACTCATGAAAATCAAG-CA-GTTCAATGGCA-GTTTTTCTT-A-GCCTTACCAAGTT--CGT-AAGC-----A-GTACTTA-GAGCAG-TTATTTTCA--GCGGAAAAATG-TA-AATGAGAT-GAGGAA--AACTGGCT-AGCCGACTGCTTAGGAA-CTGCTA-GTCCGATGTTCGCATATA--TGGTAGTGT-CTAATGAATATTCAAGGCAATACAATGAGGCTCTAAACTTG-AG-CAAATCTGCCTAGCAA----GGATTTACAATTTTTCAAACATT-AAAACCCCTATTAAAATCAG--TGTTCAAA--AT-CTATGGAA-TAAGCAAT--ACACTATTCAA---CAATAGGAAAGTTTA-TAATGGGGGGAAAAAT----AATAAAAAAACAATGCAGAAAAA-ATAAAATTGGTAAATTAA-TTATTTA--TCA--CATTTGTTGTTTTCATTTCAGAACA-CATAAATCTA--CATTTTTT-CGCCATAT--CAATATGGAAAAGAGAGAAAA--CTAAATGGAATTGTTGACTAAATTATA-TGAAACAAAATTT-AATTTAA--TTTCGAGA-TTGTAA-TATAT---GTAATA----GATCTACATCC-CAGTTGAACTTCCAGAG----TAATTCAA-CACTCAGT-AAACG-ATTTCA-AAATTCCA-AC-AC--TGAAA-TTGATGGAAAC-CT--AGACAA-CTGC---AGAAATTCTAT-CGGA-T--ATCA-AA--AG-CTGT-----TGTATAT-ATT-A-TTCA-CTGGT--TC--A-ATAAATATATT-----TCCAATATT--C-AGCAAACAAGCAGTTA-AATCCCCAAATA-----A---TCCA-CAT----AC-----AGTTGCTGTCC-ATT--TTT-TATTTGCA-ATTCACAAACT---AGTGC-CT----------GCGTTCATAA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT----CTAAGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGATTA-TTTAAA-AACTGTATTGCGCTTTGCTAGT-CCT-TCAT----TGAAAT-CACAGCA-GTTTGATAA-ACAGCCT-CATTT-TGGATAGATCTGCAAATGACT-CCGTG-AAGGAAAAGAAGCCTTTGGCAACACTGCTG------GACAACAA-A-----ATGAAGAATAAT-ACA--A-AATTATGGTAT-AGTTAATA---ACAA-AGCTAGACCCCTCACGGCCAATAGGCATT---GGCAGTAGGTGC-A-AAATGCAACATTT--TGGGGGTCCACATATAAATTTACGACAT-CGGAGTGCGGTCATAT-----CAT--TA----AAACAACA-GAGGA--TG-AATGCGAT-TCTCACAGAATT-AAATAAAGTT--AA-AAATCAA-ATC--AAAA--ATAA--TTGAG----------T---ACTATT-A--TAAGATCCCAACTCTAC-----ATTTTACAATTCCA-TTTC-AAACTGGACTCGGT-GTAGGA--GCCGGCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-CTTGGCAC--AGAAAT-CATAAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTA-TNNNN-NNNNNNNNNN-N---NNNNNNNN-NNNNNNNNNNNNNNNNNN-NNNNN--NNNNNNNNGAAGAA-----A--G--GGGAA---CA----GTCCAA-----ACAAA-TC-TCGCTGTGAT---TAAAAAATCA-T-CAGTCT-ATGAAATACAC-GTAAA--AAT-AAC--TGTACTCATAT-AAAAC-TTCTGGATATCC-TCTAAAGAA-CAGC--AG--CT-AC--ATATAC-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCATGTTTTAACAG-CAATCAA-AGG-C-GCAAGTCCTG-AAT-CT-GT-TAC-AAACGCGCGCG-------CATTC-TCTGCACA-G-AGTTAATC-G-TC-CTTT---TTATT-C-AAATGTGACGC-ATAACACAC-C--GATTGC--TTTTTTTGA--C--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-TAA-TTGAT-TACAGTTTCTGT-CCAACGGTTAATTATGATCATAT-TGGTATTG-A-ATTT--CCTATTTGCATTT--CTGAT--GAAA-------GAATTATT--AA-----TCAAGTTG-ATT------TAGATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GT-----TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCATAC--------TATATAATATA---AT-ATATT-------------------------G-TA---AGC-TAGCT-------GCTTGCACTTGTCAAG--TGTTGCAGAAAGTTAGATAT-T----AGGAGACTAAA-TGGATCTG-AACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAATCT--GCT-----AG-TG-AAC-TGCTAAGAATTAACTGCTTAT-CTGAATTTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAAGCTGCTTGGA-A-CTG--TTAGAATA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-C---GCCTTTA--GC-AACTG---CTAAA--ATAGAGC--A-GTT-CA-TTCTTTCCTTGGga
gi|20 : -TAAAT-TG-AACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----AG-TGAAAC-TGCGAAGAAATAACTGCTTATACTATA-TTCTTAGCAGTTTACATGTAGTAG-T-AAAA-CCACAA-CTGCTTGAA-A-CTG--TT---------------TAAA--------------------AAC-TG-CCACAG-AA-CT--GCC--TATAGA-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTAG
gi|21 : ACA-ATTTCA---CCCTATCAAAATCAT-GTGT--AAATAAT-CTATGGAA-TAAGCAAT--ACACTGCTCAA---CAATAGGAGAGTT-----ATAG---------A----AAGAAACAAACAAC--AAGAAAACA-AAAATTGTT-AATT-AATTTTTTA--TC-A-CATTC-TTATTT-CATTTAAGAAC-ACA-AACTTTA--CATTTTTTTCgt
gi|23 : gctaatatTACTGAA-TTCTTAGCAGT---CAAGTAGTAG-T-AAAA-C-ACAA-CTGCTTGGA-A-CTG--TTAGAAAA-----CTGCCAAATA--AT----CTC--AT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|24 : --TAAACTTTAC-----AAATATG-TATGTTAA-TTC--ATATTTATAC-----TT-T--AT-TACAGTAACGGTAAAT---CAAAATAA---------AAAATA-----------AAAATC-T-TATA-CAT--GTAGTTACTAAATTTT-A-AAA-T-A--AA-ATTTCATAC--------g
gi|25 : T--TA----AAACAACA-GAGGA--TG-AATGCGATATCTCACAGAATT-AAATAAA-TT--AA-AAATTAA-A-C--AAAA--GTAA--TT-AT----------TATAA----T-A--TAAGATCCCAACTCTAC-----ATT
gi|26 : A--GACTGTCAT-TTT-A-CAG-CAATCAA-AAG-CAACAA-AACAA-AA---T-G--CA--AAACGCGCGCCATAAAAGCAGG-----GCACA-G-AGTT-ATCGG-TC-CTTTCTCTTATT-T-
gi|27 : TACCAGTTTACCC-TAGTAG-T-AAAA-CCACAG-CTGCTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AT----CCC--TT---AAC-TG-CCAAA
gi|28 : AGATAT-TT---AATACATTAAAATAAAT-TG-AACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----AG-TGAAAC-TG
gi|29 : ATGCGAT--CTCACAGAATT-AAAGACA-TT--AA-A-------------------TAA--TTGAG----------C---A----TTG--TAAGATCCCAACTCTAC-----ATT
gi|3 : TCCAG-GAA--TTATTCAAAC--TCATT-AAATG-ATT----AA-TTCCATACGAC--TGAAGATTACTGGAAAC-CCTCAGATAAACTGCCCCAGAATCTCT-T-CGAAAT--A--A--A--AG-CTGTGTA---GTATATGATCCA-TATAACTTGTCATCTTATAGAATTACAGTCATAATCCAAGA---AC-AACGT-TCAG-ATTTT-AGTCCAAACATA-----ATAATCCA-CAC----ACTTGTCAGTT-CCGTCCTATT--TTT-TATGCATA-GTTCA-GAACTCTGAGTGCGCC----------G-ATACA-AA-GTCGTGAAATCA--CATTT--GT--CGCAGTCTCTTCATAA--TTCTGATGTCACGTCGACCCGCAA-TGCGCAAGGTAAGGAT-AAT---AA-GACTA--ATGTGC------AAT-TCT-TCAT----T----T-CACA--AAGTT-GATAA-ACAT-CC-CATTT-TGC-TA-ATCTACA--TGACT-CCACG-AAG-AAAAGA-GC--T-GGCAACACTCTGA------AA-AAGAA-ATAAGAATTGAAAATAAT-ACA--A------TGATATTAATTTATA---ACAA-AGCTTA------TA--AC-AATA----TTATGGGC--TA--TG------ATGCAACATTTGTCGGGGGTCCAAATAT---TTTA--ACATACGGAGTG--TTTATATATAGTCAT--TA----AAACAACA-GAGGAGATG-AATGCGAT--CTCACAGAATTTCAATACA-AT--AATAAATCCA-A-CCAAGAA--ATAA--TTGAG----------T---A------A---GAGGTCCCAACTCTAC-----ATTTTAC--TTCCA-TTGCAAAAATGGACTCGGT-GTAGGA----CG-CG--CCGCACCGAGGGCCTTTCGTCCCGGGGTCCTCGTT-CT--GCAC--AAAAAT-CA-TAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGACGCGA-CAGAGTCCTAGTAATGAGAAACATTA-GCTT-CGACG---ATC-TCGGAAGAA-----AATC--AAGAA----G----G--CGA-----CCATGGCCGTCGCTGAGATTAATAAAAAAT-A-TCCAGTCTCATGGCA---ACGGTTAA--A-T----------CTAGGAT-AA-AC-ATCTG
gi|3 : cgACAGTAAA--A-TGA-C--TGTA---AAATTAACTTTATCT---TATTCGCCTATCGAA-CAGCCAAG--CTTACTAGTCTAGGATCCAA---TTGCTTTGATC-CACT-A--GACTGTCAT-TTCTA-CAG-CAATCAA-AGGCC-GCAATTCCTGTAATGCT-GTCCAATAAACGCGCGAC-------CATGCAT-TGCACA-GTGGTT-ATC-G-----------GTATT-G-A------ACGC-AGAAAGCAC-CTCGA-TGC--GTTTTTT-AACC--AGAT-CG-ACGTAAAATGACAC-G-AATATCTTT-AAAA-C-TAATTTGA--TATAG-TTCTGTTCCAACGGT--ATTATGAT-ATAT-T-GTATTG-A-TTTTTGTCTAATTGCACTT---TGG--TGAAACTGTTGTAAATTATATCAA-----T-AAGTTG-ATT------TAAATAA-TTTATAAACTTTGC-----AAATATT-GATGTTAATT-C--ATAA--ATAC-----TTGG--CTATA--GTAAAT-TAAAT---TAAAA-AA---------AAAA-A-----------AAAATCGT-TATA-TATCAGTAGTTACAAAA--TG-G-AAA-T-ACCAATATTTC--AC--------CAC-CAATATA---TT-TTAGG-------------------------GATA---AGC-Ttttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|3 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaGCTTGGATA-CTGG-TTAGAAAAGAAAACTGCCCAATATTATAGTCCTC--TT---AAC-TG-TCTATA-GA-CA--GG---TA-----AACTGGCTCTAAG--ATA-AGCTCATGTT-CA-TT-TGTCCTTGGtggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataaAGAAGCTTGTTCCAACACTCA-T-AA-TG-ATT----AA-TTCCA-AC-ACATTGAAA-TTGATG--AACACC--AGATAATCTGC---AGAAATTCT-TTCGAA-TT-A--ATAA--AG-CTGTAGTTAT-TATAT--TC-AGTTCA-CTTGT--TC--A-ATAATTACAGG-----T---ATATT-CCCAACAA-CCGTTAGGTT-TATCCA--AATA-----A--ATC--ACAT----TC-----GGTT-CCGTCC-ATT--CTT-T--TTGCAAGTTC-CAAACT---AGTGC---------------AT-CA-AAAGT--TGAAA-CATACATTT--GTTCCGCAG---CTTCATTATTCTGA---TTCAC-TCGGCCCGAAAGAGT-TAA----AGGA--A-T---AAGAACTATGGTGCA-------AGTTCCTCTCAT----T----TTCACA--A-GTT-GATAACACATGCC-CATTTATGGATA-ATCTACA--TGACTTCCACGTAAG-AAAAGA-GCCCTAGGCCAAACTCTTGAAAAAAGA-AATAA-A-----ATTGAAAATAATCACA--T-GGTTATAAT-T-AATTTATA---ACAA--GTTA---------TAAACAATA----TTAATGGT-ATGG-TGC-AGAAATGCAACATTTT---GGGGTCCATAAATA--TTTT--ACAT-CGGAGTG--GTTATATA----TATCTTA----AAACAACA-GAGGA--TGGAATGCGATATCTCACAGAATT-AAATAAA-TT--AA-AAATCAACA-C--AAAA---TAACCTTGAG----------T---A----------AGGATCC--ACACTACTAACAATTTTACA-T--CAGTTTC-AAA-TGGA-TCG-T-GT-GGA--GCCG--GTTCCG-C-CGAGGGCCATTCGTCC--GGGTCCTCGTCATTA-GCAC--AAAAAT-CATTAATCT-CAAAAAAATATTCGTCGAGGCTTGATAATATACTT-GAAGACGTGT-C---CGACAAGT-CCAGTAATGAATATAGCTTCGACG--AAT--TCGGAAGAACTCAGA--A--GGCGA---CATCGCGTCAAA-----ACAA--TT-TCG-TGAGAT----------------CAGTCT-ATGAA-TACACAGTAAA--A-T-A-C--T-TACTTA-------AC-ATCTGGATATCC-TCTATAGAA--AGC--AGACCT-AC--ATATAG-ATC-AAATATT-CTT-G-TCGCACTGGATGACTGTCAT-TTT-A-CAG-CAATTCA-AAG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------AATGC-TATGCACA-G-AGTTA--T-G-TC-TTTT---TAATT-T-GAAT-TGACGCAATAACACACGC-CG--TGCTTTTTTTTTAAACCCGCGATCCGCAC-T-AAATGACAA-G-AATATCTTTCAAAA-CTTAA-TTGAA-TATG--TTCTG-TCCAACGGT--ATTATGAT-ATAC-T-GTATTG-A-TTTG--CCTAATT-CATTT--CTGGTTTTGAA-------AAATTAT---AA-----TCAAGTTG-ATTTTTTTATAAATAATTT--TAAAC-TTGC------AATATG-TATGTTAATT-C--ATAA--ATAC-----TT-----T-TA--GTAA-------------------------------------------------------ATA-CAT--GTAG-TACAAAATTTTCACAAA-T-A--AA-ATTTC--------------------ACA---AT-ATATT-------------------------G-TA---AGC-Tgttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : aGCTTGGA-A--TG--TTAGAAAA----ACTGC-AAATA--AT----CTC--CTTTAAACGTG-CCAAAG-AA------------------ACTG---CTAAA--ATA-AGC--A-GTTACA-TT-TTTCCTTGGtggaatgttagaaaaactgcaaataatctcctttaaacgtgccaaagaaactgctaaaataagcagttacatttttccttgggttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : aagaagcttgttccaacactcataatgattaattccaacacattgaaattgatgaacaccagataatctgcagaaattctttcgaattaataaagctgtagttattatattcagttcacttgttcaataattacaggtatattcccaacaaccgttaggtttatccaaataaatcacattcggttccgtccattctttttgcaagttccaaactagtgcatcaaaagttgaaacatacatttgttccgcagcttcattattctgattcactcggcccgaaagagttaaaggaataagaactatggtgcaagttcctctcattttcacaagttgataacacatgcccatttatggataatctacatgacttccacgtaagaaaagagccctaggccaaactcttgaaaaaagaaataaaattgaaaataatcacatggttataattaatttataacaagttataaacaatattaatggtatggtgcagaaatgcaacattttggggtccataaatattttacatcggagtggttatatatatcttaaaacaacagaggatggaatgcgatatctcacagaattaaataaattaaaaatcaacacaaaataaccttgagtaaggatccacactactaacaattttacatcagtttcaaatggatcgtgtggagccggttccgccgagggccattcgtccgggtcctcgtcattagcacaaaaatcattaatctcaaaaaaatattcgtcgaggcttgataatatacttgaagacgtgtccgacaagtccagtaatgaatatagcttcgacgaattcggaagaactcagaaggcgacatcgcgtcaaaacaatttcgtgagatcagtctatgaatacacagtaaaatacttacttaacatctggatatcctctatagaaagcagacctacatatagatcaaatattcttgtcgcactggatgactgtcattttacagcaattcaaagcgcaatcctgaatctgtcaaaacgcgcgccaatgctatgcacagagttatgtctttttaatttgaattgacgcaataacacacgccgtgctttttttttaaacccgcgatccgcactaaatgacaagaatatctttcaaaacttaattgaatatgttctgtccaacggtattatgatatactgtattgatttgcctaattcatttctggttttgaaaaattataatcaagttgatttttttataaataattttaaacttgcaatatgtatgttaattcataaatacttttagtaaatacatgtagtacaaaattttcacaaataaaatttcacaatatattgtaaT--TA----AAACAA-A-GAGGA--TG-A-TGCGAT-CCTCGCAGAATT-AAATAAA-TTTAAA-AAATCAA-AAC--AAAA--ATAA--TTGAG----------T---A------A---AAGATCCAAATCGTAC-----ATTTTACA-TTCCA-TTTC-AAAA-GGACTTGGT-GTAGGA--GCCG-CG--CCG-A-CGAGGGCCCTTCGTCCC-GGGTCC-CGTC-TT--GCACCAAAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATAATTCGAAGACGGCGACAA-GTCCAAGT-ATGA--AATATTAAGCTT-CGAGCGAAATCTTCGGAAGAA-----A--CTCAAGAA---GG----CCCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATCAAT-CAGTCT-ATGAAATACGCAGTAAA--A-T-A-C--T-TACTCATAT-AACA---TCTGGATATCC-TCTATAGAAACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTT-G-TC--ACTGA--GACTGTCAT-TTT-A-CAGGCAATCAATAGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AA-CG-GCGTC-------CATGC-T-TGCACAAG-AGTTA-TC-GGTC-CTTT---TTAT----GAAT-TGACGC-ATAACACAC-C-CGAATGC--TTTTTTTGAACC---GAT-C---C-T-AAATGACAC-G-AATATCTTTCAAA--C-TAAATTGAT--ATAGTT-CTGTTCCAACGGT--ATTATGAT-ATATATGGTATTG-A-TTTT--GCTA-TTGCATTT--CTGGGTTGAAA----------TTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGCA----AAATATGTTATGTAAT-T-C--AT----ATAC-----TT-T--CT-TA--GTAAAT-CAAAA---AAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-AAT--GTAGTTACAAAATTT----AAA-TAA--AA-ATTTCACAA--------TATATgttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : gGCTTGGA-AACTG--TTAGAAA------CTGCCAAATA--AT----CTC--TT---AAC-T--CCAAAGAAA-CT--GCC--T-----------------AA--ATA-AGC--A-GTT-CA--T-TTTCCTTGGgtaaggcttggaaactgttagaaactgccaaataatctcttaactccaaagaaactgcctaaataagcagttcattttccttggtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|6 : gttaaaacaaagaggatgatgcgatcctcgcagaattaaataaatttaaaaaatcaaaacaaaaataattgagtaaaagatccaaatcgtacattttacattccatttcaaaaggacttggtgtaggagccgcgccgacgagggcccttcgtcccgggtcccgtcttgcaccaaaaaatcattaatctcaaaaatattcgtcgaggcttgatctaataattcgaagacggcgacaagtccaagtatgaaatattaagcttcgagcgaaatcttcggaagaaactcaagaaggccccaaacaaaatctcgctgagattaaaaaatcaatcagtctatgaaatacgcagtaaaatacttactcatataacatctggatatcctctatagaaacagcagctacatatagatcaattcttgtcactgagactgtcattttacaggcaatcaataggcgcaatcctgaatctgtcaaacggcgtccatgcttgcacaagagttatcggtcctttttatgaattgacgcataacacacccgaatgctttttttgaaccgatcctaaatgacacgaatatctttcaaactaaattgatatagttctgttccaacggtattatgatatatatggtattgattttgctattgcatttctgggttgaaattataaatcaagttgatttaaataatttaaactttgcaaaatatgttatgtaattcatatactttcttagtaaatcaaaaaaaaaaaaaaaaaaaatcttataaatgtagttacaaaatttaaataaaaatttcacaatatatgtaagTAGTTTTCCTTTAACCTTCC-TTAGCCTTCCCTTTCTATTCTGGCAA--GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACCA-GTTTTCGTTAAGC-----ATGTACT-G-GAGCAG-TTATTTTCATAGCG-AAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAGC-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTGC-TAGCAA----GGATTTACAAATTTTCACA-ATT-AA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAATGGG---AAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACAT-AATTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAGA---AA--CTAG-TGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TT-CGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAAT-GAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T-----ATAA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAA-ATAATAATA-T-----TCCAACATT-AC-AACGA-TA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|7 : TAGTTTTCCTTTAACCTTCC-TTAGCCTTCCCTTTCTATTCTGGCAA--GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACCA-GTTTTCGTTAAGC-----ATGTACT-G-GAGCAG-TTATTTTCATAGCG-AAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAGC-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTGC-TAGCAA----GGATTTACAAATTTTCACA-ATT-AA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAATGGG---AAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACAT-AATTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAGA---AA--CTAG-TGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TT-CGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAAT-GAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T-----ATAA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAA-ATAATAATA-T-----TCCAACATT-AC-AACGA-TA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtctctacacagacacgacgatcaaagt
gi|8 : TGCACTTGTCCAG--T-TTGCA-AA-GTTAGATAT-TTATTAGGA--CTAAA-TGAAT-TG-AACTGCT----T-----T------TAAAAAATATA--AT-AACTGATAGACTCAGCTTAATAAG-TGAAAC-TGCTAAGAATTAACTGCTTATAATGAA-TTCTTAGCAATTTACAAGTAGTAG-TAAAAA-CCACAA-CTGCTTGAA-A-CTGTTTTAGAAAA----ACTGCCGAAGA--ATAA--CTCAATT---AAC-TC-CCAAAG-AA-CTTGGCC--TA--GC-AACTG---CTAAATGATA-A-C--A-GTT-CATTT-TTTCCTTGGtctctacacagacacgacgatcaaagt
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): AGCATTCATTTTTCGCTTCCGGTAACCCTGTAACAGAAAGTCCAAGCTTTTTGTTGCACATATACTTTTTAAATCACTATAGTTCCCTGAAAACAATATAGATGTCCTGCATTGTCTTAAATATATCATGTGTGAGACTTTAGGGAAATTTGAGGGACCTTATAACTTTTTATTTTCAATTCAGTTAAGTCCTGAAAACAAAAGAAAGTCCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTGCAGGACAAATTTGAGTCTACACAGTTTCTACAAAGTCACAACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTTCTGAATTTCCTTGCATTAGGACAGGAGAGATTAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATATGCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Unaligned ( gi|11 ): GTGCAAGACTTTTTGTTGCACATACTTTTATCAACAAGTCCTGAAAAGCAATGTAATATGTCCTACATTTTCCTGAATATATCATGTGTGAGACTTTTAGGAAATTTGAGGGACTTATAACTTTTTTTTAATTTCATCAGTAAGGTTCTGAAAACCAAAAGAAAAGTCCTGTAAAGACCTCTGCAGTGAGTAAGTGGGCCATTGTGCGAGGACATTTGAGTAATGTATTTGTCCTACAAGTTCCTAAAGTCACACTATGTTATGGGTATATTAAAGGATCAACTGCACAGGAATAAGAAGTCCTGAACTTATCCCAACTGCTAGGAGAGAGAAGTGGACTGGAAAAAGGAAGTCTGGGACTTCCAGGGATATTTCAAATTTCAACGAAGTGGGATTTATTTTTGGAGG
Unaligned ( gi|12 ): AATAAACGCATTCATTTTTCCTTGGGTAACCCTGTACAGAAAGTCCAAGACTTTTTGTTGCATCATATACTTTTTAATCACAAGTCCTGAAAAGCAATATAATGTCCTGCATTGTCTTAAATATATCATGTTGTGAGACTTTTAGGAATTTGAGGGACTTATAACTTTTTATTTCAATTCAGTAAGTCTCTGAAAACAAAAGAAAGTCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTTGCAGGACATTTGAGTCTACAAGTTCTACAAAGTCACACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTCATGAATTTCCTATGCATTAGGACAGGAGAGAAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATA
Unaligned ( gi|13 ): GCTTTTAGGACACCTCTGTACAGAAAGTCCAAGACTTTTTGTTGCACATGCTTTTATCAACAAGTCCTGAAAAGCGATGATAATGTCCTGCATTGTCCTGAATATATTCAGCTGTGAGGAACTTTTTAGGAAATTTGAGGACTTTTATTTCATCAGTAAGTCCTGAAAAACAAAAGAAAGTCCTGTAAAACCATCTGCTGTTGTAGTGGGAATTTGCAGGATATTTTGAGTAATTGTATTTTGTCCTACAAGTTGATATTCAAGGGCAAATTGCAGGAATAAGAGCCTGAATTATCCCACTGCTTAGACAGAGAGATAGTGGGACGGAAAAGGAAGTCTTCAGGATTCCAGGGATTATCCTTAAAATATTCAAGAAAGTGGGATAATTTTTTGGCAGGGA
Unaligned ( gi|22 ): ATGTTACTGGGATATTTAAGGAGAATGGCAGAATAAGAAGTCTGAATTATCCACTGCATTAGGACAAGAGACTCAGTGGACTAGGATAAAGGGAAGTTCAGACTTCCAGGGATGATTCCTTCAAATATCAGAAAGTGGGATTTATTTTTGGAGGG
Unaligned ( gi|30 ): GGGATATCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Alignments
lowQualScore : 1 444444444444444444 111 1 1111 11111 1 2 11 1 2 2222222 22 11111 11 22 1 1 1 1 2222 11 11 1 1 111 1 2222 11 222 11 1 11 222 111 1111 2 1 11 1 1 11 1 11 11 111 11 1 11 1 1 22 1 1 11 1 11 111111 11 2222 1 111 3333 2222222 222222 2222222 22222222 11 11 11111111 11 33333333333 11 1 11 111 7777777777777777777 1 1 11 1 11 11 11 111 3333 1 1 1 1 3333 22222222 1 5555555 1 1 44444444444 1111 1 1 11 1 1 1 11 11 1 1 1 222222 555555 1 2 1 333333 11 111 11 777777777777777777777777777777777 11 1111 222 222 1111 1 11 33333 1111 111 111111 111 6666666666666666666666666 11111 11 11 11 111 2 11 11 11 11 111111 222222 1 11 11 55555555555555555555555 22222 1111 11 2222222 1111 11 11 11 111 1 11111 22222222 111 22 1 111 1 11 11 1 1 1 44444444444444 111 11111 111111 11111 111 11111 1111 11 777777777777777777777 111111 33333333333333 1111 55555555555555555555555 111 44444444444444 11 1 2222 22222222222222222 11111 1111 11111
lowQualScore : 6 3 7 999999999999999999 7 77 0 8 000 1 8 0 2222 99999 11 3 0 99 8 0 0 8 0 66 11 1111111 8 8 8 11 8 22222 88 11 66 44 0 0 0 0 0000 2 22 33 66 3 0 3 0 3 5 666 0 1111 1 33 444 0 33 44 0 8 6 6 0 11 111 66 0 444 1 7777 55 3 77 5 0 0 0 11 0 8 8 99 0 0 11 0 5 11 0 1 33 777 33 0 33 1 0 0 9 33 0 1 0 999 2 9 33 0 11 222222 1 3 3 2 44 0 6 5555 7 6 6 99 44 99 6 99 1 000 1 5 5 5 1111 888 77 5 9999999 5 55 5 5 5 000000 99 6666666 99 6 88888888 88 00 66666666 00 55555555555 6 6 88 3 22 77 33 777 1111111111111111111 0 0 33 0 33 33 33 2 777 3333 55 5 0 0 0 0 1111 22222222 0 555 6666666 0 0 66666666666 4444 0 3 0 00 0 0 2 0 33 33 44 0 0 0 000000 7 333333 0 0 0 555555 33 7 777 33 333333333333333333333333333333333 22 9999 2 999 3 1 000 4444 2 0 33 66666 99 4444 6 99 6 5 333 5 5 77 5 333333 111 77 1111111111111111111111111 0 44444 88 0 8 8 66 8 0 11 8 11 111 4 33 0 8 99 11 8 0 8 11 77 7 2 8 333 888888 2 111111 2 7 1 8 00 88 33333333333333333333333 3 00000 0 3 8 4444 33 8 8 11 1 6 99 6666666 1 7 5555 6 8 1 8 11 11 8 11 8 8 444 8 0 0 8 8 99 6 6 99 6 6 6 6 3 6 6 6 77777 44444444 555 6 6 00 1 5 000 888 3 6 77 6 44 99 9 2 99 6 6 6 6 6 6 6 6 6 6 88 1 1 7 99 6 6 6 3 6 6 99 6 3 99 00000000000000 222 66666 5 666666 5 5 66 0 77777 5 333 77 1 77 44444 5555 5 55 555555555555555555555 1 5 555 666666 555 5 77 33333333333333 1111 1 5 77 5 22222222222222222222222 66 666 3 88 3 444 44444444444444 11 8 8 3 6 0000 777 5 1 5 5 33333333333333333 4 66 1 66 11111 4 4 4 4 5 4 8 4 4 3 3 77 4 1 6666 44 0000 44 555 3 3 3 44444 77 00000 555 77 3 44 3 3 3 3
lowQualScore : . . . .................. . .. . . ... . . . .... ..... .. . . .. . . . . . .. .. ....... . . . .. . ..... .. .. .. .. . . . . .... . .. .. .. . . . . . . ... . .... . .. ... . .. .. . . . . . .. ... .. . ... . .... .. . .. . . . . .. . . . .. . . .. . . .. . . .. ... .. . .. . . . . .. . . . ... . . .. . .. ...... . . . . .. . . .... . . . .. .. .. . .. . ... . . . . .... ... .. . ....... . .. . . . ...... .. ....... .. . ........ .. .. ........ .. ........... . . .. . .. .. .. ... ................... . . .. . .. .. .. . ... .... .. . . . . . .... ........ . ... ....... . . ........... .... . . . .. . . . . .. .. .. . . . ...... . ...... . . . ...... .. . ... .. ................................. .. .... . ... . . ... .... . . .. ..... .. .... . .. . . ... . . .. . ...... ... .. ......................... . ..... .. . . . .. . . .. . .. ... . .. . . .. .. . . . .. .. . . . ... ...... . ...... . . . . .. .. ....................... . ..... . . . .... .. . . .. . . .. ....... . . .... . . . . .. .. . .. . . ... . . . . . .. . . .. . . . . . . . . ..... ........ ... . . .. . . ... ... . . .. . .. .. . . .. . . . . . . . . . . .. . . . .. . . . . . . .. . . .. .............. ... ..... . ...... . . .. . ..... . ... .. . .. ..... .... . .. ..................... . . ... ...... ... . .. .............. .... . . .. . ....................... .. ... . .. . ... .............. .. . . . . .... ... . . . . ................. . .. . .. ..... . . . . . . . . . . . .. . . .... .. .... .. ... . . . ..... .. ..... ... .. . .. . . . .
lowQualScore : 7 3 3 000000000000000000 3 44 8 0 222 4 0 6 6666 88888 88 6 4 66 0 6 0 0 8 44 66 6666666 0 0 0 00 0 22222 66 00 44 00 0 0 0 0 8888 0 55 88 55 2 0 2 2 2 5 222 0 2222 0 22 111 8 00 66 6 0 0 0 8 00 666 44 8 000 0 0000 66 8 22 0 8 6 8 00 6 0 0 00 6 6 44 8 4 00 8 0 88 555 88 0 88 0 0 0 8 88 0 0 0 000 5 2 22 0 22 888888 0 2 2 5 00 7 7 8888 3 7 7 22 88 22 7 22 4 000 7 7 7 7 3333 000 99 7 6666666 0 99 7 7 0 999999 22 8888888 88 7 33333333 33 33 88888888 55 77777777777 7 7 33 3 77 77 00 555 5555555555555555555 0 0 88 0 88 88 88 5 555 8888 00 5 0 2 0 0 2222 88888888 0 000 5555555 0 0 88888888888 8888 0 2 0 88 0 0 5 0 88 22 55 0 0 0 222222 0 888888 0 0 0 000000 22 0 555 22 555555555555555555555555555555555 55 5555 5 222 2 0 888 5555 5 0 88 88888 22 2222 7 22 7 0 333 7 7 99 7 000000 444 99 9999999999999999999999999 7 33333 88 8 0 0 22 0 8 00 0 00 888 0 00 8 0 00 00 0 8 0 00 00 2 2 0 000 000000 8 222222 8 8 0 0 88 22 44444444444444444444444 8 00000 8 8 0 8888 00 0 0 66 7 7 22 8888888 0 5 7777 7 0 4 0 00 00 0 00 0 0 000 0 8 8 0 0 22 7 7 22 7 7 7 7 3 7 7 7 00000 22222222 000 7 7 55 4 7 000 000 3 7 77 7 88 22 3 5 22 7 7 7 7 7 7 7 7 7 7 33 3 7 3 22 7 7 7 3 7 7 22 7 3 22 00000000000000 777 77777 7 444444 0 7 99 4 55555 0 999 99 7 99 33333 0000 7 77 000000000000000000000 9 7 999 444444 999 7 99 66666666666666 6666 4 7 99 7 99999999999999999999999 88 999 2 88 2 000 22222222222222 00 0 0 6 7 8888 333 7 7 0 0 66666666666666666 4 11 0 11 11111 4 4 4 4 9 4 0 0 0 1 1 33 3 5 5555 22 8888 22 444 1 1 3 88888 99 88888 888 99 3 66 3 3 3 3
consensus : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATTG-TAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A-AT--AA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT-AC-AAC-GACAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-C--C----------GNT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CAC-A--AG-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-GCGNC----A-AGTCCAAGT-ATGATAAATATTA-GCTTCGA-CG-AATC-TCGGAAGAA-----A-TNGGGAA---CG----GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATAT-AA-AC-ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---T-----------------AAATCAAAA-AAAAAA-A-AAAA------TC-T-TATA-CAT--GTAGTTAC--------------AAAATTTT-A-AAAT-A--AA-ATTTCA-----------------------TACTATATNATATATAT-ATATTGTA---AGCTA-GCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TGAA-CTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----A-G-TGAAAC-T-GCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAGT-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
Reference ( family-657 ) : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATTGGTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A-AT--AA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT-AC-AAC-GACAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-C--C----------GAT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-CTNAGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---CAGT-CCT-TCAT----T----T-CAC-A--AG-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTG------GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-GNNNC----A-AGTCCAAGT-ATGATAAATATTATGCNTCGA-CG-AATC-TCGGAAGAA-----A--NGGGAA---CG----GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATAT-AACAC-ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---T-----------------AAATCAAAA-AAAAAA-A-AAAA------TC-T-TATA-CAT--GTAGTTAC--------------AAAATTTT-A-AAAT-A--AA-ATTTCA-----------------------TACTATATAATATATAT-ATATTGTA---AGCTA-GCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TGAA-CTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----A-G-TGAAAC-T-GCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAGT-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|1 : AGTG--AGGCA-GTT--GTAGCAGTTATTAAGCCTTCCCAGTTGTTAC-TTGCCTAGGC-GTTTATTTTAGCCGTTCCTTA-CCTT-CCTTAGCCAATCTTTTCTATTCTGG---AAGTAATAA-AATTA--CATTTAAAATAAGCGA-ATACAGAGAGATATTTTTCTTTA-GCCTTACC-AGTT--CGT-AAGC-----A-GTAC-TGAGAGCAGCTTATTTTCA--GC-GAAAAATG---TAATGAGATTGAGGAA---ACT-GCT-AG-CAGACTGCTTAGGAATCTGCTAAGT----CATTC--ATATAATTGGTAGTGT-CTAATGAATATTCA-GGCAATACAATGAGGAT-TTA-CTAGTAG-CAA---TG-CTAGCAATAGGAGATTTACAATTCTTCACA--TTAAAA-CACTATTAAAA-CAGTGTGTTCCA-GAATACTATGGTATTA-GCAATTAACACTATTCAAAGTTTATA------TCTAATG-----GGGAAATAATAATAAAAAAAAAACAATCAAAGAAAATAT-AAATTG-TAAATTAA-TTATTTAGTTCAATCATTT-TTGTT--CATTTCAGAACA-CATAAATCTAATTATTTTTTTTCCCATATCAAAAATTGGAAAAGAG---AAAAACT-AATGAA--TGTTGACTAAATT-TAATGAAACAAAAATTTCATTTAGATTTCGTCTATTGTAAGTATATAT---AATACA-TGATA--CATCCACAT-TGAACTTCCAG------TTATTCAT---CTCAGTTAAACGCACTTTTAAAATTCCA-AC-AC--TGAA--TTGATGCAAAA-CC--AGACAA-CTGC---CGAAATTCT-T-CGGA-TCAATAT--AA--AG-CTGT-------TGTAT-ATT-A-TTCA-CTAGT--ATC-AATA--AATATTGA-----TCCAATATTCAC-AAC---CAAGCAGTTTTAATCCAC-AATATCCACA--ATCCA-C-T----AC-----AGTT-CCGTCA-TTT--TTT-TATT-GCA---TCAC-AACT---AGTGC-C--TATGTTTCTATGTT-TA-AA-GT--ATTAA-CA--CATTTATGT--C-CAG---CTTCAT-A--TTAGATT-CAC-TCGGCCCGGAA-AGT-CAGC---AGGA-TA-T---AA-AACTATATTGTGCTTGC-TAGT-CCT-TCATGAAAT-------AC-A--AG-T-GATAA-ACAC-CT-CATTT-TGGATA-ATCTGC--ATGAT------G-AA-GAAAAG-AGTC--T-GGCAACATTCTTG------GA-AACAACAAATGAAAATAAT-ACATTACAATTATGGTA-TA-TTTATATAAACAACAGCTAGATCCT-CACG-CCA-T----AT----GGCTATA-GTGCCA-AAATG--GCATTTG-TGGGGG-CCAAATAT--GTT-A--A-AT-CGGAGT--GGTTATAT-----CAT--TATTTAAAACAACAAGAG--GATG-A-TGGAAA-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAAGAATA---TTGAGAGTCTTAATGT---A----T-AAATAAGATCACACTTCTAC-----ATTTTAC-ATTCCA-TTTC-AAA-TGGACTCGGTAGTAGGAAAGCC-GCG--CCG-A-CGAGGGCC-TTCGTCCG-GAGTCCTCGTC-TT--GCAC--AAAAATTCATTAATCTTCAGAAA--TATTCGTCGAGG-TTGATCTAATACTTGGAA-AC-GGCCC----A-AGTCCAAAT-A--ATAAATATTATGCATCGA-TG-AATCATCGGAAGACTC---A--AGGGAAGACCA----GTCCAATATTAACAAAATC-TCTCTGAGAT---TGAAAAATC-AT-CAATCT-ATGAAATACACAGT-AAACAAT-ATCTT-TACTCATAT-AACAC-ATCTGGATATCC-TTTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-CA---TT-CTTTG-TC-CACTGA--AACTGTCAT-TT-T--ACA-GCAATCAA-AG--C-GCAA-TCCTG-AAT-CTTGT-TA--AAACGCACGCC--------ATCC-T-TGCAC-AG-AGTTA-TC-GTC-CTTT---TTATT-TTAAATATGACGC-ATAACACAT-C-CGAT-GC--TTTTTTTGAACC--CGAT-CG-AT-T-AAATGACAC-GCAATATCTTTCAAAAAC-T-AA-TTGATACATTGTTC---TTTCAACGGT--TATATGAAT-A-AT-T-GTATTG-A-TTTC--CCT-A-TTG-ATTT--CTGATT---GA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AA-TATG-TATGTTAA-TTC--ATAA--ATAC-----TT-T--CT-TATAGTAA---CGAGTATACAAAAAAGAAAAAACAAAA-AAAAAA-A-AAAAAAAAAATC-T-TATA-CAT--GTAGTTACAAAATTTTAAAATTAAAATTTC-A-TACT-G--AA-ACTTTATATGATATATATATATATTAATATATTATATTATATATA--ATATTGTA---AGCAAAGCTACATGTAGCTTGCACTTGTCCAG--T-TTGCA-AA-GTTAGATATAT----AGAGGACCAAG-TGGAT-TGAAACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAAACT--GCT-----AAG-TGAAAC-TTGCTAAGAATTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAATAGTAGTTAAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGGAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-TACTG---CTAAAT-ATA-AGC--A-GTT-TA-TT-TTTCCTGGG
gi|10 : ttaaagtgtgagatatgatattgcgaacccattcCGAGTCG-ATT------TAA---------TAAACTT-GC-----AAATATA-TATGTTAA-T-CTCATTA--AAACCAAAGTA-TAACT-T---GTAA---------------------GATTCATAA-TCAAAT-ATAAAA------TC-TCTATAGCGT--TTAGTTAC--------------AAATTTTT-A-AA-T-A--AA--TTTTA-----------------------TATGATATTATATATATTATATTATATAAAGCTA-GCT-------A-TTGCACTTGTCCAGTTT-TTGCA-AAAGTT-GA-AT-T----AGG-GACTAAA-T-GCT-TGAA-CTGCTAGAATAATAAA------TAACTGGTATCTTGTAAA--GGTAGAT----CT-----A-GTTGAAACTT-GCTAAGAA-TAA--GCTTATACTGAA-TTCTTAGCAGTTTACAAGAAGTAGT-AAAA-CCACAA-CTGTTTGGA-A-CTG--TTAG--AA----ACTGCCAAATA--AT----CTC--AT---AAC-TGCCCAAAG-CATTT--GCCT-TA--GCAAACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTa
gi|14 : AAA--GAAT-TGAA-CTGCT----T-----ACATGTATAACTGGTATCTTGT-GA--GGTGTACT--GCT-----A-G-TAAAAC-T-GCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAGT-AAAA-CAACAA-CTGCCTGGA-A-CTG--TTAG-TAA----ACTGCCTAATA--AT----CTC--TT---AAC-TG-CCTAAG-AA-CT--GCC--TA--TG-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|15 : ttattctaaataacttttctaactcgatcattcaataaaaaaaagtttagaattttttttttctttcattagactggaatttgcaaaaataaatgcaagctagttgtgagatctggctcttatgtgttaaaaatgctagccttatgataaccagttccactttgc-CTGC---ATAA---TT-T-CGAA-T--A-AC--AACCAGACTG-GCA-ATGTATGT-GTC-G-TTTAATTTTT--TCg
gi|16 : aagacaaaagaaaatcctCATGTCAAAGTGGAAGGCA-GTTTGCTAGCAGTTATTAAGCCTTCCCAGT-------------------TTTATTTTAG-AGTTCCCTAACCTT-CCATA-----------CTCTTCTGAC-AAATTGGTG------------GAAA--CAAG-CA-GTTCAA-AACA-GTTTTTC-TTA-GCTTTCCC-TGTTT---TTAACCAGTAGATCTAC-TG-GAGCAG-TTATTTTC--AAT-GAAAAAT-GTA-AATGAGAT-GAAGA--AAAC-TGCTgaatccaatattgatagtttcttcaccaagttcctacaaagtccatcatttaaatgttactgtgcgagtagtttttaaggacacattagtaagacgagggataagtataagtccctgaaaaataatctaatggagccactgctcagatctaggacagagagaagttatgaggatatgtagaaataaagtgggagtccagggacttccagagcgatatcctttcaaaatattcagaatgacgaagtacctacagttgtggatttagatttttg
gi|17 : ttaaggtgacaaaatatgtatataaagtaaacacttcccataATC-GTCTCTTT---CTTTTGT-AAAT-TGACGC-ATAACACAC-C-CGAT-GC--TTTTTCT-AACC--CGAT-CG-AC-T-AAATGACACTG-AATATCTT-CAAAA-C-T-AA-T-GAT-AAAAGTT-CTGTCCAAACGGT--ATTATGA-T-ATAT-T-GTATTGTATTTTT--CCT-ATTTGCATTTTCCTGATT--AAA-------AATTTATA--AATTTGTTCAAATTGTATT------TAG--AA-TT--GAAA-TTAGCTAAAGAAATAAT-TATGTT
gi|18 : ttTATAT-GTATT-TA---AGCT---------------TGCATTTTTCCAG--T-TTGCG-AAGTTTAAAT---T----AGGAG--TAAA-TAGAT-TGAT-C-G--------------------AACTGTTGTCTTGT-GA--GCTAAACT--GCT-----A-G----------------AAATAACTGCTTATACTGAA-TTCTTAGCAGCTTACAATTAGTAGT-AAAACCCACAA-CTGTTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AA----CTC--TT---AAC-TG-CTAAAG-A---T--A-----A--GC-AG-TA---CT----------------GTT-TA-TT-TTGCCTTGGtgaaaattttc
gi|19 : agat----T-----A------TA--TGGTGTCTTGT-AA--AGTGGACT--GCT-----A-G-TGAAAC-T-GCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAGT-GAAA-CCACAA-CTGCTTGAA-T-CTG--TTTAAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-TCAAAG-AA-CT--GCC--TA--TC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGGgta
gi|2 : CATGTCAAAGTGGAAGGCACGTTTGGTTGCAGTTATTAAGCCTTCCCAGTT-TTACTTT-CTTAGGCAGTT--TTATAGCAGTTCTATAACCTTCCCTTAGCCTT-CTTTTCTATTCTTGCAAAAGTAATAATA-TTACTCATGAAAATCAAG-CA-GTTCAATGGCA-GTTTTTC-TTA-GCCTTACCAAG--TTCG-TAAGC-----A-GTACTTA-GAGCAG-TTATTTTC--AGCGGAAAAAT-GTA-AATGAGAT-GAGGA--AAACTGGC-TAGCC-GACTGCTTAGGAA-CTGCTA-GTCCGATGTTCGCATATA--TGGTAGTG-TCTAATGAATATTCAAGGCAATACAATGAGGCTCTAAACTTG-AG-CAAATCTGCCTAGCAA----GGATTTACAATTTTTCAAACATTAAAACCCCTATTAAAATCA--GTGTTCAA--AAT-CTATGG-AATAAGCAAT--ACACTATTCAA---CAATAGGAAAGTTT-ATAATGGGGGGAAAAAT----AATAAAAAAACAATGCAGAAAAA-ATAAAATTGGTAAATT-AATTATTTA--TC-A-CATTTGTTGTTTTCATTTCAGAAC-ACATAAATCTA--CA-TTTTTTCGCCATAT--CAATATGGAAAAGAGAGAAAA--CTAAATGGAATTGTTGACTAAATTATA-TGAAACAAAA-TTTAATTTAAT-TTCGAGA-TTGTAA-TATAT---GTAATA----GATCTACATCC-CAGTTGAACTTCCAGAG----TAATTC-AACACTCAGT-AAACG-ATTTCA-AAATTCCA-AC-AC--TG-AAATTGATGGAAAC-CT--AGACAA-CTGC---AGAAATTCTAT-CGGA-T----ATCAAA--AG-CTGT-----TGTATAT-ATT-A-TTC-ACTGGT--T-C-AATA--AATATATT-----TCCAATATT--C-AGCAAACAAGCAGTTA-AATCCCCAAAT------A--ATCC-ACAT----AC-----AGTTGCTGTCC-ATT--TTT-TATTTGCA-ATTCACAAACT---AGTGC-CTGC----------GTT-CATAA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT---CTAAGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGATTA-TTTAAA-AACTGTATTGCGCTTTGCTAGT-CCT-TCAT----TGAAAT-CAC-AGCAGTTTGATAA-ACAG-CCTCATTT-TGGATAGATCTGCAAATGACT-CCGTG-AAGGAAAAGAAGCCTTT-GGCAACACTGCTG------GACAACAA-AATGAAGAATAAT-ACA--A-AATTATGGTA-TAGTTAATA---ACAA-AGCTAGACCCCTCACGGCCAATAGGCATT---GGCAGTAGGTGC-A-AAATGCAACATTT--TGGGGGTCCACATATAAATTTACGACAT-CGGAGTGCGGTCATAT-----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAAGTT--AA-AAATCAA-ATC--AAAA--ATAA--TTGAG----------T---ACTATT-A--TAAGATCCCAACTCTAC-----ATTTTACAATTCCA-TTTC-AAACTGGACTCGGT-GTAGGA--GCCGGCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-CTTGGCAC--AGAAAT-CATAAATCT-CAAAAA--TATTCGTCGAGGCTTGATC---TATNNNNNNNNN-NNNNN----N-NNNNNNNNN-NNNNNNNNNNNNNNNNNNNNN-NN-NNNN-NNNGAAGAA-----A--GGGGAA---CA----GTCCAA-----AC-AAATC-TCGCTGTGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACAC-GTAAAA--ATAAC--TGTACTCATAT-AAAAC-TTCTGGATATCC-TCTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCATGTT-TTAACA-GCAATCAA-AGG-C-GCAAGTCCTG-AAT-CT-GT-TAC-AAACGCGCGCG-------CATTC-TCTGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-C-AAATGTGACGC-ATAACACA--C-CGATTGC--TTTTTTTGA--C--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TACAGTTTCTG-TCCAACGGTTAATTATGA-TCATAT-TGGTATTG-A-ATTT--CCT-ATTTGCATTT--CTGA--TGAAA-------GAATTATT--AA-----TCAAGTTG-ATT------TAGATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GT-----T-----------------AAATCAAAA-AAAAAA-A-AAAA------TC-T-TATA-CAT--GTAGTTAC--------------AAAATTTT-A-AAAT-A--AA-ATTTCA-----------------------TACTATATAATATA-AT-ATATTGTA---AGCTA-GCT-------GCTTGCACTTGTCAAG--TGTTGCAGAAAGTTAGATAT-T----AGGAGACTAAA-TGGATCTGAA-CTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAATCT--GCT-----A-G-TG-AAC-T-GCTAAGAATTAACTGCTTAT-CTGAATTTCTTAGCAGTTTACAAGTAGTAGT-AAAA-CCACAAGCTGCTTGGA-A-CTG--TTAGAATA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-C---GCCTTTA--GC-AACTG---CTAAA--ATAGAGC--A-GTT-CA-TTCTTTCCTTGGga
gi|20 : AT-TGAA-CTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----A-G-TGAAAC-T-GCGAAGAAATAACTGCTTATACTATA-TTCTTAGCAGTTTACATGTAGTAGT-AAAA-CCACAA-CTGCTTGAA-A-CTG--TT---------------TAAA--------------------AAC-TG-CCACAG-AA-CT--GCC--TATAGA-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTAG
gi|21 : taaA-CCCTATCAAAATCAT-GTGT--AAATAAT-CTATGGAA-TAAGCAAT--ACACTGCTCAA---CAATAGGAGAGTT-----AT---AG------A----AAGAAACAAACAAC--AAGAAAACA-AAAATTGTT-AATT-AATTTTTTA--TC-A-CATTC-TTATTT-CATTTAAGAAC-ACA-AACTTTA--CATTTTTTTCgt
gi|23 : gctaatatacaatttcTACTGAA-TTCTTAGCAGT---CAAGTAGTAGT-AAAA-C-ACAA-CTGCTTGGA-A-CTG--TTAGAAAA-----CTGCCAAATA--AT----CTC--AT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|24 : --TAAACTTTAC-----AAATATG-TATGTTAA-TTC--ATATTTATAC-----TT-T--AT-TACAGTAACGGT-----------------AAATCAAAATAAAAAATA-AAAA------TC-T-TATA-CAT--GTAGTTAC--------------TAAATTTT-A-AAAT-A--AA-ATTTCA-----------------------TACg
gi|25 : T--TA----AAACAACA-GAG--GATG-AATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATTAA-A-C--AAAA--GTAA--TT-AT----------TATAA----T-A--TAAGATCCCAACTCTAC-----ATT
gi|26 : A--GACTGTCAT-TT-T--ACA-GCAATCAA-AAG-CAACAA-AACAA-AA---T-G--CA--AAACGCGCGCCATAAAAGCAGG-----GCAC-AG-AGTT-ATCGGTC-CTTTCTCTTATT-T-
gi|27 : TACCAGTTTACCC-TAGTAGT-AAAA-CCACAG-CTGCTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AT----CCC--TT---AAC-TG-CCAAA
gi|28 : AGATAT-TT---AATACATTAAAATAAAT-TGAA-CTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----A-G-TGAAAC-T-G
gi|29 : ATGCGAT--CTCACAGAA-TTAAAGACA-TT--AA-A-------------------TAA--TTGAG----------C---A----TTG--TAAGATCCCAACTCTAC-----ATT
gi|3 : TCCAG-GAA--TTATTCAAAC--TCATT-AAATG-ATT----AA-TTCCATACGAC--TGAAGATTACTGGAAAC-CCTCAGATAAACTGCCCCAGAATCTCT-T-CGAAAT--A-A----A--AG-CTGTGTA---GTATATGATCCA-TATAACTTGTCATCT-TATAGAATTACAGTCATAATCCAAGA---AC-AAC-GTTCAG-ATTTT-AGTCCAAACATA-----ATAATCCA-CAC----ACTTGTCAGTT-CCGTCCTATT--TTT-TATGCATA-GTTCA-GAACTCTGAGTGCGC--C----------GATACA-AA-GTCGTGAAATCA--CATTT--GT--CGCAGTCTCTTCAT-AATTCTGATGTCACGTCGACCCGCAA-TGCGCAAGGTAAGGA-TAAT---AA-GACTA--ATGTGC------AAT-TCT-TCAT----T----T-CACAA--AG-TTGATAA-ACAT-CC-CATTT-T-GCTA-ATCTAC--ATGACT-CCACG-AA-GAAAAG-AG---CT-GGCAACACTC-TGAAAAA-GA-AATAAGAATTGAAAATAAT-ACA--------ATGATATTAATTTATA---ACAA-AGCT--------TATAA-CAAT----ATTATGGGC--TA--TG------ATGCAACATTTGTCGGGGGTCCAAATAT---TTTA--ACATACGGAGT--GTTTATATATAGTCAT--TA----AAACAACA-GAGGAGATG-AATGCGA--TCTCACAGAATTTCAATACA-AT--AATAAATCCA-A-CCAAGAA--ATAA--TTGAG----------T---A------A---GAGGTCCCAACTCTAC-----ATTTTAC--TTCCA-TTGCAAAAATGGACTCGGT-GTAGGA----C-GCG--CCGCACCGAGGGCCTTTCGTCCCGGGGTCCTCGTT-CT--GCAC--AAAAAT-CA-TAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-GCGAC----AGAGTCCTAGTAATGAGAAACATTA-GCTTCGA-CG--ATC-TCGGAAGAA-----AATCAAGAA----G----G--CGA-----CCATGGCCGTCGCTGAGATTAATAAAAAAT--ATCCAGTCTCATGGCA---ACGGT-TAA--AT---------CTAGGAT-AA-AC-ATCTG
gi|3 : cgACAGT-AAA--ATGAC--TGTA---AAATTAACTTTATCT---TATTCGCCTATCG-AACAGCCAAG--CTTACTAGTCTAGGATCCAA---TTGCTTTGATC-CACT-A--GACTGTCAT-TTCT--ACA-GCAATCAA-AGGCC-GCAATTCCTGTAATGCT-GTCCAATAAACGCGCGAC-------CATGCAT-TGCAC-AGTGGTT-ATC-G----------GTATT-G-A------ACGC-AGAAAGCAC-CTCGA-TGC--GTTTTTT-AACC--AGAT-CG-ACGTAAAATGACAC-G-AATATCTTT-AAAA-C-T-AATTTGA--TATAG-TTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTTTGTCTAA-TTGCACTT---TGG--TGAAACTGTTGTAAATTATATCAA-----T-AAGTTG-ATT------TAAATAA-TTTATAAACTTTGC-----AAATATT-GATGTTAATT-C--ATAA--ATAC-----TTGG--CTATA--GTAAAT-T-----------------AAATTAAAA-AAAAAA-A-AAAA------TCGT-TATA-TATCAGTAGTTAC--------------AAAA--TG-G-AAAT-ACCAATATTTC-------------------------ACCAC-CAATATATtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|3 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaGCTTGGATA-CTGG-TTAGAAAAGAAAACTGCCCAATATTATAGTCCTC--TT---AAC-TG-TCTATA-GA-CA--GG---TA-----AACTGGCTCTAAG--ATA-AGCTCATGTT-CA-TT-TGTCCTTGGtttagggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataaAGAAGCTTGTTCCAACACTCA-T-AA-TG-ATT----AA-TTCCA-AC-ACATTGAAA-TTGATG--AACACC--AGATAATCTGC---AGAAATTCT-TTCGAA-TT-A-AT--AA--AG-CTGTAGTTAT-TATAT--TC-AGTTCA-CTTGT--TC--AATA--ATTACAGG-----T---ATATT-CCCAAC-AACCGTTAGGTT-TATCCA--AATA-----A--ATC--ACAT----TC-----GGTT-CCGTCC-ATT--CTT-T--TTGCAAGTTC-CAAACT---AGTGC----------------AT-CA-AAAGT--TGAAA-CATACATTT--GTTCCGCAG---CTTCATTA-TTCTGATT-CAC-TCGGCCCGAAAGAGT-TAA----AGGA--A-T---AAGAACTATGGTGCA-------AGTTCCTCTCAT----T----TTCAC-A--AG-TTGATAACACATGCC-CATTTATGGATA-ATCTAC--ATGACTTCCACGTAA-GAAAAG-AGCC-CTAGGCCAAACTCTTGAAAAAAGA-AATAA-AATTGAAAATAATCACA--T-GGTTATAAT--TAATTTATA---ACAA--GTTATA---------AACAAT----ATTAATGGT-ATG-GTGC-AGAAATGCAACATTTT---GGGGTCCATAAAT--ATTTT--ACAT-CGGAGT--GGTTATATA----TATCTTA----AAACAACA-GAG--GATGGAATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATCAACA-C--AAAA---TAACCTTGAG----------T---A----------AGGATCC--ACACTACTAACAATTTTAC-AT--CAGTTTC-AAA-TGGA-TCG-T-GT-GGA--GCC-G-GTTCCG-C-CGAGGGCCATTCGTCC--GGGTCCTCGTCATTA-GCAC--AAAAAT-CATTAATCT-CAAAAAAATATTCGTCGAGGCTTGATAATATACTT-GAAGAC-GTGTCCGACA-AGTCCA-GT-A--ATGAATAT-A-GCTTCGA-CG-AAT--TCGGAAGAACTCAGA--AGGCGA---CATCGCGTCAAA-----ACAA--TT-TCG-TGAGAT----------------CAGTCT-ATGAA-TACACAGT-AAA--AT-AC--T-TACTTA-------AC-ATCTGGATATCC-TCTATAG-AA-AGC--AGACCT-AC--ATATAG-ATC-AAATATT-CTT-G-TCGCACTGGATGACTGTCAT-TT-T--ACA-GCAATTCA-AAG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------AATGC-TATGCAC-AG-AGTTA--T-GTC-TTTT---TAATT-T-GAAT-TGACGCAATAACACACGC-CG--TGCTTTTTTTTTAAACCCGCGATCCGCAC-T-AAATGACAA-G-AATATCTTTCAAAA-CTT-AA-TTGAA-TATG--TTCTG-TCCAACGGT--ATTATGA-T-ATAC-T-GTATTG-A-TTTG--CCT-A-ATTCATTT--CTGGTTTTGAA-------AAATTAT---AA-----TCAAGTTG-ATTTTTTTATAAATAATTT--TAAAC-TTGC------AATATG-TATGTTAATT-C--ATAA--ATAC-----TT-----T-TA--GTAA--------------------------------------------------------ATA-CAT--GTAG-TAC--------------AAAATTTTCACAAAT-A--AA-ATTTCA-----------------------CA-------------AT-ATATTGTA---AGCTgttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : aGCTTGGA-A--TG--TTAGAAAA----ACTGC-AAATA--AT----CTC--CTTTAAACGTG-CCAAAG-AA------------------ACTG---CTAAA--ATA-AGC--A-GTTACA-TT-TTTCCTTGGtggaatgttagaaaaactgcaaataatctcctttaaacgtgccaaagaaactgctaaaataagcagttacatttttccttgggttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : aagaagcttgttccaacactcataatgattaattccaacacattgaaattgatgaacaccagataatctgcagaaattctttcgaattaataaagctgtagttattatattcagttcacttgttcaataattacaggtatattcccaacaaccgttaggtttatccaaataaatcacattcggttccgtccattctttttgcaagttccaaactagtgcatcaaaagttgaaacatacatttgttccgcagcttcattattctgattcactcggcccgaaagagttaaaggaataagaactatggtgcaagttcctctcattttcacaagttgataacacatgcccatttatggataatctacatgacttccacgtaagaaaagagccctaggccaaactcttgaaaaaagaaataaaattgaaaataatcacatggttataattaatttataacaagttataaacaatattaatggtatggtgcagaaatgcaacattttggggtccataaatattttacatcggagtggttatatatatcttaaaacaacagaggatggaatgcgatatctcacagaattaaataaattaaaaatcaacacaaaataaccttgagtaaggatccacactactaacaattttacatcagtttcaaatggatcgtgtggagccggttccgccgagggccattcgtccgggtcctcgtcattagcacaaaaatcattaatctcaaaaaaatattcgtcgaggcttgataatatacttgaagacgtgtccgacaagtccagtaatgaatatagcttcgacgaattcggaagaactcagaaggcgacatcgcgtcaaaacaatttcgtgagatcagtctatgaatacacagtaaaatacttacttaacatctggatatcctctatagaaagcagacctacatatagatcaaatattcttgtcgcactggatgactgtcattttacagcaattcaaagcgcaatcctgaatctgtcaaaacgcgcgccaatgctatgcacagagttatgtctttttaatttgaattgacgcaataacacacgccgtgctttttttttaaacccgcgatccgcactaaatgacaagaatatctttcaaaacttaattgaatatgttctgtccaacggtattatgatatactgtattgatttgcctaattcatttctggttttgaaaaattataatcaagttgatttttttataaataattttaaacttgcaatatgtatgttaattcataaatacttttagtaaatacatgtagtacaaaattttcacaaataaaatttcacaatatattgtaaT--TA----AAACAA-A-GAG--GATG-A-TGCGAT-CCTCGCAGAA-TTAAATAAA-TTTAAA-AAATCAA-AAC--AAAA--ATAA--TTGAG----------T---A------A---AAGATCCAAATCGTAC-----ATTTTAC-ATTCCA-TTTC-AAAA-GGACTTGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCCCTTCGTCCC-GGGTCC-CGTC-TT--GCACCAAAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATAATTCGAAGACGGCGAC----A-AGTCCAAGT-ATG--AAATATTAAGCTTCGAGCGAAATCTTCGGAAGAA-----ACTCAAGAA---GG----CCCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATCAAT-CAGTCT-ATGAAATACGCAGT-AAA--AT-AC--T-TACTCATAT-A--AC-ATCTGGATATCC-TCTATAGAAACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-C-TTG-T--CACTGA--GACTGTCAT-TT-T--ACAGGCAATCAATAGG-C-GCAA-TCCTG-AAT-CT-GT-C---AAACG-GCGTC-------CATGC-T-TGCACAAG-AGTT-ATCGGTC-CTTT---TTA---T-GAAT-TGACGC-ATAACACAC-C-CGAATGC--TTTTTTTGAA-C--CGAT-C---C-T-AAATGACAC-G-AATATCTTTC-AAA-C-TAAA-TTGA--TATAG-TTCTGTTCCAACGGT--ATTATGA-T-ATATATGGTATTG-A-TTTT--GCT-A-TTGCATTT--CTGGGTTG----------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGCA----AAATATGTTATGTAAT-T-C--AT----ATAC-----TT-T--CT-TA--GTAAAT-C-----------------AAAAAAAAA-AAAAAA-A-AAAA------TC-T-TATA-AAT--GTAGTTAC--------------AAAATTT----AAATAA--AA-ATTTCA-----------------------CAATATATgttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : gGCTTGGA-AACTG--TTAGAAA------CTGCCAAATA--AT----CTC--TT---AAC-T--CCAAAGAAA-CT--GCC--T-----------------AA--ATA-AGC--A-GTT-CA--T-TTTCCTTGGgtaaggcttggaaactgttagaaactgccaaataatctcttaactccaaagaaactgcctaaataagcagttcattttccttggtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|6 : gttaaaacaaagaggatgatgcgatcctcgcagaattaaataaatttaaaaaatcaaaacaaaaataattgagtaaaagatccaaatcgtacattttacattccatttcaaaaggacttggtgtaggagccgcgccgacgagggcccttcgtcccgggtcccgtcttgcaccaaaaaatcattaatctcaaaaatattcgtcgaggcttgatctaataattcgaagacggcgacaagtccaagtatgaaatattaagcttcgagcgaaatcttcggaagaaactcaagaaggccccaaacaaaatctcgctgagattaaaaaatcaatcagtctatgaaatacgcagtaaaatacttactcatataacatctggatatcctctatagaaacagcagctacatatagatcaattcttgtcactgagactgtcattttacaggcaatcaataggcgcaatcctgaatctgtcaaacggcgtccatgcttgcacaagagttatcggtcctttttatgaattgacgcataacacacccgaatgctttttttgaaccgatcctaaatgacacgaatatctttcaaactaaattgatatagttctgttccaacggtattatgatatatatggtattgattttgctattgcatttctgggttgaaattataaatcaagttgatttaaataatttaaactttgcaaaatatgttatgtaattcatatactttcttagtaaatcaaaaaaaaaaaaaaaaaaaatcttataaatgtagttacaaaatttaaataaaaatttcacaatatatgtaagTAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATTG-TAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT-AC-AAC-GATA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|7 : TAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATTG-TAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT-AC-AAC-GATA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtctctacacagacacgacgatcaaagt
gi|8 : TGCACTTGTCCAG--T-TTGCA-AA-GTTAGATAT-TTATTAGGA--CTAAA-TGAAT-TGAA-CTGCT----T-----T------TAAAAAATATA--AT-AACTGATAGACTCAGCTTAATAA-G-TGAAAC-T-GCTAAGAATTAACTGCTTATAATGAA-TTCTTAGCAATTTACAAGTAGTAGTAAAAA-CCACAA-CTGCTTGAA-A-CTGTTTTAGAAAA----ACTGCCGAAGA--ATAA--CTCAATT---AAC-TC-CCAAAG-AA-CTTGGCC--TA--GC-AACTG---CTAAATGATA-A-C--A-GTT-CATTT-TTTCCTTGGtctctacacagacacgacgatcaaagt
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): AGCATTCATTTTTCGCTTCCGGTAACCCTGTAACAGAAAGTCCAAGCTTTTTGTTGCACATATACTTTTTAAATCACTATAGTTCCCTGAAAACAATATAGATGTCCTGCATTGTCTTAAATATATCATGTGTGAGACTTTAGGGAAATTTGAGGGACCTTATAACTTTTTATTTTCAATTCAGTTAAGTCCTGAAAACAAAAGAAAGTCCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTGCAGGACAAATTTGAGTCTACACAGTTTCTACAAAGTCACAACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTTCTGAATTTCCTTGCATTAGGACAGGAGAGATTAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATATGCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Unaligned ( gi|11 ): GTGCAAGACTTTTTGTTGCACATACTTTTATCAACAAGTCCTGAAAAGCAATGTAATATGTCCTACATTTTCCTGAATATATCATGTGTGAGACTTTTAGGAAATTTGAGGGACTTATAACTTTTTTTTAATTTCATCAGTAAGGTTCTGAAAACCAAAAGAAAAGTCCTGTAAAGACCTCTGCAGTGAGTAAGTGGGCCATTGTGCGAGGACATTTGAGTAATGTATTTGTCCTACAAGTTCCTAAAGTCACACTATGTTATGGGTATATTAAAGGATCAACTGCACAGGAATAAGAAGTCCTGAACTTATCCCAACTGCTAGGAGAGAGAAGTGGACTGGAAAAAGGAAGTCTGGGACTTCCAGGGATATTTCAAATTTCAACGAAGTGGGATTTATTTTTGGAGG
Unaligned ( gi|12 ): AATAAACGCATTCATTTTTCCTTGGGTAACCCTGTACAGAAAGTCCAAGACTTTTTGTTGCATCATATACTTTTTAATCACAAGTCCTGAAAAGCAATATAATGTCCTGCATTGTCTTAAATATATCATGTTGTGAGACTTTTAGGAATTTGAGGGACTTATAACTTTTTATTTCAATTCAGTAAGTCTCTGAAAACAAAAGAAAGTCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTTGCAGGACATTTGAGTCTACAAGTTCTACAAAGTCACACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTCATGAATTTCCTATGCATTAGGACAGGAGAGAAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATA
Unaligned ( gi|13 ): GCTTTTAGGACACCTCTGTACAGAAAGTCCAAGACTTTTTGTTGCACATGCTTTTATCAACAAGTCCTGAAAAGCGATGATAATGTCCTGCATTGTCCTGAATATATTCAGCTGTGAGGAACTTTTTAGGAAATTTGAGGACTTTTATTTCATCAGTAAGTCCTGAAAAACAAAAGAAAGTCCTGTAAAACCATCTGCTGTTGTAGTGGGAATTTGCAGGATATTTTGAGTAATTGTATTTTGTCCTACAAGTTGATATTCAAGGGCAAATTGCAGGAATAAGAGCCTGAATTATCCCACTGCTTAGACAGAGAGATAGTGGGACGGAAAAGGAAGTCTTCAGGATTCCAGGGATTATCCTTAAAATATTCAAGAAAGTGGGATAATTTTTTGGCAGGGA
Unaligned ( gi|22 ): ATGTTACTGGGATATTTAAGGAGAATGGCAGAATAAGAAGTCTGAATTATCCACTGCATTAGGACAAGAGACTCAGTGGACTAGGATAAAGGGAAGTTCAGACTTCCAGGGATGATTCCTTCAAATATCAGAAAGTGGGATTTATTTTTGGAGGG
Unaligned ( gi|30 ): GGGATATCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Alignments
lowQualScore : 1 444444444444444444 111 1 1111 11111 1 2 11 1 2 2222222 22 11111 11 22 1 1 1 1 2222 11 11 1 1 111 1 2222 11 222 11 1 11 222 111 1111 1 11 1 1 11 1 11 11 111 11 1 11 1 1 22 1 1 11 1 11 111111 11 2222 1 111 3333 2222222 222222 2222222 22222222 11 11 11111111 11 33333333333 11 1 11 111 777777777777777 1 1 1 11 1 11 11 11 111 222 1 1 1 1 3333 22222222 1 4444444 1 1 44444444444 1111 1 1 11 1 1 1 11 11 1 1 1 22222 22222 1 1 333333 11 111 11 777777777777777777777777777777777 11 1111 222 222 1111 1 11 33333 1111 111 111111 111 6666666666666666666666666 11111 11 11 11 111 2 11 11 11 11 111111 222222 1111 11 11 22222222 4444444444 22222 1111 11 2222222 1111 111 11 11 11 111 1 11111 22222222 111 22 1 111 1 11 11 1 1 1 44444444444444 111 11111 111111 11111 111 11111 1111 11 777777777777777777777 111111 33333333333333 1111 55555555555555555555555 111 44444444444444 11 1 2222 22222222222222222 11111 1111 11111
lowQualScore : 6 3 7 999999999999999999 7 77 0 8 000 1 8 0 2222 99999 11 3 0 99 8 0 0 8 0 66 11 1111111 8 8 8 11 8 22222 88 11 66 44 0 0 0 0 0000 2 22 33 66 3 0 3 0 3 5 666 0 1111 1 33 444 0 33 44 0 8 6 6 0 11 111 66 0 444 1 7777 55 3 77 8 0 0 11 0 8 8 99 0 0 11 0 5 11 0 1 33 777 33 0 33 1 0 0 9 33 0 1 0 999 2 9 33 0 11 222222 1 3 3 2 44 0 6 5555 7 6 6 99 44 99 6 99 1 000 1 5 5 5 1111 888 77 5 9999999 5 55 5 5 5 000000 99 6666666 99 6 88888888 88 00 66666666 00 55555555555 6 6 88 3 22 77 33 777 000000000000000 1 0 0 0 33 0 33 33 33 2 777 333 99 5 0 0 0 0 1111 22222222 0 555 9999999 0 0 66666666666 4444 0 3 0 00 0 0 3 0 33 33 44 0 0 0 66666 7 7 22222 0 3 0 555555 33 7 777 33 333333333333333333333333333333333 22 9999 2 999 3 1 000 4444 2 0 33 66666 99 4444 6 99 6 5 333 5 5 77 5 333333 111 77 1111111111111111111111111 0 44444 88 0 8 8 66 8 0 11 8 11 111 4 33 0 8 99 11 8 0 8 11 6 0 7 2 777777 1 8 2 111111 1111 8 00 88 8 33333333 9999999999 3 00000 0 3 8 4444 33 8 8 11 1 6 99 6666666 1 7 5555 111 8 1 8 11 11 8 11 8 8 444 8 0 0 8 8 99 6 6 99 6 6 6 6 3 6 6 6 77777 44444444 555 6 6 00 1 5 000 888 3 6 77 6 44 99 9 2 99 6 6 6 6 6 6 6 6 6 6 88 1 1 7 99 6 6 6 3 6 6 99 6 3 99 00000000000000 222 66666 5 666666 5 5 66 0 77777 5 333 77 1 77 44444 5555 5 55 555555555555555555555 1 5 555 666666 555 5 77 33333333333333 1111 1 5 77 5 88888888888888888888888 9999999 3 88 3 444 44444444444444 11 8 8 3 6 0000 777 5 1 5 5 33333333333333333 4 66 1 66 11111 4 4 4 4 5 4 8 4 4 3 3 77 4 1 6666 44 0000 44 555 3 3 3 44444 77 00000 555 77 3 44 3 3 3 3
lowQualScore : . . . .................. . .. . . ... . . . .... ..... .. . . .. . . . . . .. .. ....... . . . .. . ..... .. .. .. .. . . . . .... . .. .. .. . . . . . . ... . .... . .. ... . .. .. . . . . . .. ... .. . ... . .... .. . .. . . . .. . . . .. . . .. . . .. . . .. ... .. . .. . . . . .. . . . ... . . .. . .. ...... . . . . .. . . .... . . . .. .. .. . .. . ... . . . . .... ... .. . ....... . .. . . . ...... .. ....... .. . ........ .. .. ........ .. ........... . . .. . .. .. .. ... ............... . . . . .. . .. .. .. . ... ... .. . . . . . .... ........ . ... ....... . . ........... .... . . . .. . . . . .. .. .. . . . ..... . . ..... . . . ...... .. . ... .. ................................. .. .... . ... . . ... .... . . .. ..... .. .... . .. . . ... . . .. . ...... ... .. ......................... . ..... .. . . . .. . . .. . .. ... . .. . . .. .. . . . .. . . . . ...... . . . ...... .... . .. .. . ........ .......... . ..... . . . .... .. . . .. . . .. ....... . . .... ... . . . .. .. . .. . . ... . . . . . .. . . .. . . . . . . . . ..... ........ ... . . .. . . ... ... . . .. . .. .. . . .. . . . . . . . . . . .. . . . .. . . . . . . .. . . .. .............. ... ..... . ...... . . .. . ..... . ... .. . .. ..... .... . .. ..................... . . ... ...... ... . .. .............. .... . . .. . ....................... ....... . .. . ... .............. .. . . . . .... ... . . . . ................. . .. . .. ..... . . . . . . . . . . . .. . . .... .. .... .. ... . . . ..... .. ..... ... .. . .. . . . .
lowQualScore : 7 3 3 000000000000000000 3 44 8 0 222 4 0 6 6666 88888 88 6 4 66 0 6 0 0 8 44 66 6666666 0 0 0 00 0 22222 66 00 44 00 0 0 0 0 8888 0 55 88 55 2 0 2 2 2 5 222 0 2222 0 22 111 8 00 66 6 0 0 0 8 00 666 44 8 000 0 0000 66 8 22 0 6 8 00 6 0 0 00 6 6 44 8 4 00 8 0 88 555 88 0 88 0 0 0 8 88 0 0 0 000 5 2 22 0 22 888888 0 2 2 5 00 7 7 8888 3 7 7 22 88 22 7 22 4 000 7 7 7 7 3333 000 99 7 6666666 0 99 7 7 0 999999 22 8888888 88 7 33333333 33 33 88888888 55 77777777777 7 7 33 3 77 77 00 555 222222222222222 0 0 0 0 88 0 88 88 88 5 555 222 88 5 0 2 0 0 2222 88888888 0 000 0000000 0 0 88888888888 8888 0 2 0 88 0 0 2 0 88 22 55 0 0 0 22222 0 0 55555 0 2 0 000000 22 0 555 22 555555555555555555555555555555555 55 5555 5 222 2 0 888 5555 5 0 88 88888 22 2222 7 22 7 0 333 7 7 99 7 000000 444 99 9999999999999999999999999 7 33333 88 8 0 0 22 0 8 00 0 00 888 0 00 8 0 00 00 0 8 0 00 0 8 2 2 222222 0 0 8 222222 8888 0 88 22 0 22222222 4444444444 8 00000 8 8 0 8888 00 0 0 66 7 7 22 8888888 0 5 8888 777 0 4 0 00 00 0 00 0 0 000 0 8 8 0 0 22 7 7 22 7 7 7 7 3 7 7 7 00000 22222222 000 7 7 55 4 7 000 000 3 7 77 7 88 22 3 5 22 7 7 7 7 7 7 7 7 7 7 33 3 7 3 22 7 7 7 3 7 7 22 7 3 22 00000000000000 777 77777 7 444444 0 7 99 4 55555 0 999 99 7 99 33333 0000 7 77 000000000000000000000 9 7 999 444444 999 7 99 66666666666666 6666 4 7 99 7 66666666666666666666666 6666666 2 88 2 000 22222222222222 00 0 0 6 7 8888 333 7 7 0 0 66666666666666666 4 11 0 11 11111 4 4 4 4 9 4 0 0 0 1 1 33 3 5 5555 22 8888 22 444 1 1 3 88888 99 88888 888 99 3 66 3 3 3 3
consensus : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A-AT--AA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT-AC-AAC-GACAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-C--C----------GNT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACA-AGTCCAAGT-ATGATAAATATT-A-GCTTCGA-CG-AATC-TCGGAAG-A---AA-TCGGGAAG------CG-GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATAT-AA-AC---ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---T-----------------AAATCAAAA-AAAAAA-A-AAAA------TC-T-TATA-CAT--GTAGTTAC--------------AAAATTTT-A-AAAT-A--AA-ATTTCA-----------------------CACTATATTATATATA-TATATTGT---AAGCTA-GCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TGAA-CTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----A-G-TGAAAC-T-GCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAGT-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
Reference ( family-657 ) : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A-AT--AA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT-AC-AAC-GACAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-C--C----------GNT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGNCA-AGTCCAAGT-ATGATAAATATT-A-GCTTCGA-CG-AATC-TCGGAAG-A---AA-TNGGGAA-------CG-GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATAT-AA-AC---ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---T-----------------AAATCAAAA-AAAAAA-A-AAAA------TC-T-TATA-CAT--GTAGTTAC--------------AAAATTTT-A-AAAT-A--AA-ATTTCA-----------------------TACTATATNATATATA-TATATTGT---AAGCTA-GCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TGAA-CTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----A-G-TGAAAC-T-GCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAGT-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|1 : AGTG--AGGCA-GTT--GTAGCAGTTATTAAGCCTTCCCAGTTGTTAC-TTGCCTAGGC-GTTTATTTTAGCCGTTCCTTA-CCTT-CCTTAGCCAATCTTTTCTATTCTGG---AAGTAATAA-AATTA--CATTTAAAATAAGCGA-ATACAGAGAGATATTTTTCTTTA-GCCTTACC-AGTT--CGT-AAGC-----A-GTAC-TGAGAGCAGCTTATTTTCA--GC-GAAAAATG---TAATGAGATTGAGGAA---ACT-GCT-AG-CAGACTGCTTAGGAATCTGCTAAGT----CATTC--ATATAATTGGTAGTGT-CTAATGAATATTCA-GGCAATACAATGAGGAT-TTA-CTAGTAG-CAA---TG-CTAGCAATAGGAGATTTACAATTCTTCACA--TTAAAA-CACTATTAAAA-CAGTGTGTTCCA-GAATACTATGGTATTA-GCAATTAACACTATTCAAAGTTTATA------TCTAATG-----GGGAAATAATAATAAAAAAAAAACAATCAAAGAAAATAT-AAATT-GTAAATTAA-TTATTTAGTTCAATCATTT-TTGTT--CATTTCAGAACA-CATAAATCTAATTATTTTTTTTCCCATATCAAAAATTGGAAAAGAG---AAAAACT-AATGAA--TGTTGACTAAATT-TAATGAAACAAAAATTTCATTTAGATTTCGTCTATTGTAAGTATATAT---AATACA-TGATA--CATCCACAT-TGAACTTCCAG------TTATTCAT---CTCAGTTAAACGCACTTTTAAAATTCCA-AC-AC--TGAA--TTGATGCAAAA-CC--AGACAA-CTGC---CGAAATTCT-T-CGGA-TCAATAT--AA--AG-CTGT-------TGTAT-ATT-A-TTCA-CTAGT--ATC-AATA--AATATTGA-----TCCAATATTCAC-AAC---CAAGCAGTTTTAATCCAC-AATATCCACA--ATCCA-C-T----AC-----AGTT-CCGTCA-TTT--TTT-TATT-GCA---TCAC-AACT---AGTGC-C--TATGTTTCTATGTT-TA-AA-GT--ATTAA-CA--CATTTATGT--C-CAG---CTTCAT-A-TT-AGATT-CAC-TCGGCCCGGAA-AGT-CAGC---AGGA-TA-T---AA-AACTATATTGTGCTTGC-TAGT-CCT-TCATGAAAT-------ACA--A-G-T-GATAA-ACAC-CT-CATTT-TGGATA-ATCTGC--ATGAT------G-AA-GAAAAG-AGTC--T-GGCAACATTCTTGGAAAC----AACAA-A--TGAAAATAAT-ACATTACAATTATGGTA-TA-TTTATATAAACAACAGCTAGATCCT-CACG-CCA-T----AT----GGCTATA-GTGCCA-AAATG--GCATTTG-TGGGGG-CCAAATAT--GTT-A--A-AT-CGGAGT--GGTTATAT-----CAT--TATTTAAAACAACAAGAG--GATG-A-TGGAAA-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAAGAATA---TTGAGAGTCTTAATGT---A----T-AAATAAGATCACACTTCTAC-----ATTTTAC-ATTCCA-TTTC-AAA-TGGACTCGGTAGTAGGAAAGCC-GCG--CCG-A-CGAGGGCC-TTCGTCCG-GAGTCCTCGTC-TT--GCAC--AAAAATTCATTAATCTTCAGAAA--TATTCGTCGAGG-TTGATCTAATACTTGGAA-AC-G----GCCCA-AGTCCAAAT-A--ATAAATATT-ATGCATCGA-TG-AATCATCGGAAG-ACTCAA---GGGAAGAC----CA-GTCCAATATTAACAAAATC-TCTCTGAGAT---TGAAAAATC-AT-CAATCT-ATGAAATACACAGT-AAACAAT-ATCTT-TACTCATAT-AACAC---ATCTGGATATCC-TTTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-CA---TT-CTTTG-TC-CACTGA--AACTGTCAT-TT-T--ACA-GCAATCAA-AG--C-GCAA-TCCTG-AAT-CTTGT-TA--AAACGCACGCC--------ATCC-T-TGCAC-AG-AGTTA-TC-GTC-CTTT---TTATT-TTAAATATGACGC-ATAACACAT-C-CGAT-GC--TTTTTTTGAACC--CGAT-CG-AT-T-AAATGACAC-GCAATATCTTTCAAAAAC-T-AA-TTGATACATTGTTC---TTTCAACGGT--TATATGAAT-A-AT-T-GTATTG-A-TTTC--CCT-A-TTG-ATTT--CTGATT---GA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AA-TATG-TATGTTAA-TTC--ATAA--ATAC-----TT-T--CT-TATAGTAA---CGAGTATACAAAAAAGAAAAAACAAAA-AAAAAA-A-AAAAAAAAAATC-T-TATA-CAT--GTAGTTACAAAATTTTAAAATTAAAATTTC-A-TACT-G--AA-ACTTTATATGATATATATATATATTAATATATTATATTATATATA--ATATTGT---AAGCAAAGCTACATGTAGCTTGCACTTGTCCAG--T-TTGCA-AA-GTTAGATATAT----AGAGGACCAAG-TGGAT-TGAAACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAAACT--GCT-----AAG-TGAAAC-TTGCTAAGAATTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAATAGTAGTTAAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGGAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-TACTG---CTAAAT-ATA-AGC--A-GTT-TA-TT-TTTCCTGGG
gi|10 : ttaaagtgtgagatatgatattgcgaacccattcCGAGTCG-ATT------TAA---------TAAACTT-GC-----AAATATA-TATGTTAA-T-CTCATTA--AAACCAAAGTA-TAACT-T---GTAA---------------------GATTCATAA-TCAAAT-ATAAAA------TC-TCTATAGCGT--TTAGTTAC--------------AAATTTTT-A-AA-T-A--AA--TTTTA-----------------------TATGATATTATATATATTATATTATATAAAGCTA-GCT-------A-TTGCACTTGTCCAGTTT-TTGCA-AAAGTT-GA-AT-T----AGG-GACTAAA-T-GCT-TGAA-CTGCTAGAATAATAAA------TAACTGGTATCTTGTAAA--GGTAGAT----CT-----A-GTTGAAACTT-GCTAAGAA-TAA--GCTTATACTGAA-TTCTTAGCAGTTTACAAGAAGTAGT-AAAA-CCACAA-CTGTTTGGA-A-CTG--TTAG--AA----ACTGCCAAATA--AT----CTC--AT---AAC-TGCCCAAAG-CATTT--GCCT-TA--GCAAACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTa
gi|14 : AAA--GAAT-TGAA-CTGCT----T-----ACATGTATAACTGGTATCTTGT-GA--GGTGTACT--GCT-----A-G-TAAAAC-T-GCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAGT-AAAA-CAACAA-CTGCCTGGA-A-CTG--TTAG-TAA----ACTGCCTAATA--AT----CTC--TT---AAC-TG-CCTAAG-AA-CT--GCC--TA--TG-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|15 : ttattctaaataacttttctaactcgatcattcaataaaaaaaagtttagaattttttttttctttcattagactggaatttgcaaaaataaatgcaagctagttgtgagatctggctcttatgtgttaaaaatgctagccttatgataaccagttccactttgc-CTGC---ATAA---TT-T-CGAA-T--A-AC--AACCAGACTG-GCA-ATGTATGT-GTC-G-TTTAATTTTT--TCg
gi|16 : aagacaaaagaaaatcctCATGTCAAAGTGGAAGGCA-GTTTGCTAGCAGTTATTAAGCCTTCCCAGT-------------------TTTATTTTAG-AGTTCCCTAACCTT-CCATA-----------CTCTTCTGAC-AAATTGGTG------------GAAA--CAAG-CA-GTTCAA-AACA-GTTTTTC-TTA-GCTTTCCC-TGTTT---TTAACCAGTAGATCTAC-TG-GAGCAG-TTATTTTC--AAT-GAAAAAT-GTA-AATGAGAT-GAAGA--AAAC-TGCTgaatccaatattgatagtttcttcaccaagttcctacaaagtccatcatttaaatgttactgtgcgagtagtttttaaggacacattagtaagacgagggataagtataagtccctgaaaaataatctaatggagccactgctcagatctaggacagagagaagttatgaggatatgtagaaataaagtgggagtccagggacttccagagcgatatcctttcaaaatattcagaatgacgaagtacctacagttgtggatttagatttttg
gi|17 : ttaaggtgacaaaatatgtatataaagtaaacacttcccataATC-GTCTCTTT---CTTTTGT-AAAT-TGACGC-ATAACACAC-C-CGAT-GC--TTTTTCT-AACC--CGAT-CG-AC-T-AAATGACACTG-AATATCTT-CAAAA-C-T-AA-T-GAT-AAAAGTT-CTGTCCAAACGGT--ATTATGA-T-ATAT-T-GTATTGTATTTTT--CCT-ATTTGCATTTTCCTGATT--AAA-------AATTTATA--AATTTGTTCAAATTGTATT------TAG--AA-TT--GAAA-TTAGCTAAAGAAATAAT-TATGTT
gi|18 : ttTATA-TGTATT-T---AAGCT---------------TGCATTTTTCCAG--T-TTGCG-AAGTTTAAAT---T----AGGAG--TAAA-TAGAT-TGAT-C-G--------------------AACTGTTGTCTTGT-GA--GCTAAACT--GCT-----A-G----------------AAATAACTGCTTATACTGAA-TTCTTAGCAGCTTACAATTAGTAGT-AAAACCCACAA-CTGTTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AA----CTC--TT---AAC-TG-CTAAAG-A---T--A-----A--GC-AG-TA---CT----------------GTT-TA-TT-TTGCCTTGGtgaaaattttc
gi|19 : agat----T-----A------TA--TGGTGTCTTGT-AA--AGTGGACT--GCT-----A-G-TGAAAC-T-GCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAGT-GAAA-CCACAA-CTGCTTGAA-T-CTG--TTTAAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-TCAAAG-AA-CT--GCC--TA--TC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGGgta
gi|2 : CATGTCAAAGTGGAAGGCACGTTTGGTTGCAGTTATTAAGCCTTCCCAGTT-TTACTTT-CTTAGGCAGTT--TTATAGCAGTTCTATAACCTTCCCTTAGCCTT-CTTTTCTATTCTTGCAAAAGTAATAATA-TTACTCATGAAAATCAAG-CA-GTTCAATGGCA-GTTTTTC-TTA-GCCTTACCAAG--TTCG-TAAGC-----A-GTACTTA-GAGCAG-TTATTTTC--AGCGGAAAAAT-GTA-AATGAGAT-GAGGA--AAACTGGC-TAGCC-GACTGCTTAGGAA-CTGCTA-GTCCGATGTTCGCATATA--TGGTAGTG-TCTAATGAATATTCAAGGCAATACAATGAGGCTCTAAACTTG-AG-CAAATCTGCCTAGCAA----GGATTTACAATTTTTCAAACATTAAAACCCCTATTAAAATCA--GTGTTCAA--AAT-CTATGG-AATAAGCAAT--ACACTATTCAA---CAATAGGAAAGTTT-ATAATGGGGGGAAAAAT----AATAAAAAAACAATGCAGAAAAA-ATAAAATTGGTAAATT-AATTATTTA--TC-A-CATTTGTTGTTTTCATTTCAGAAC-ACATAAATCTA--CA-TTTTTTCGCCATAT--CAATATGGAAAAGAGAGAAAA--CTAAATGGAATTGTTGACTAAATTATA-TGAAACAAAA-TTTAATTTAAT-TTCGAGA-TTGTAA-TATAT---GTAATA----GATCTACATCC-CAGTTGAACTTCCAGAG----TAATTC-AACACTCAGT-AAACG-ATTTCA-AAATTCCA-AC-AC--TG-AAATTGATGGAAAC-CT--AGACAA-CTGC---AGAAATTCTAT-CGGA-T----ATCAAA--AG-CTGT-----TGTATAT-ATT-A-TTC-ACTGGT--T-C-AATA--AATATATT-----TCCAATATT--C-AGCAAACAAGCAGTTA-AATCCCCAAAT------A--ATCC-ACAT----AC-----AGTTGCTGTCC-ATT--TTT-TATTTGCA-ATTCACAAACT---AGTGC-CTGC----------GTT-CATAA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT---CTAAGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGATTA-TTTAAA-AACTGTATTGCGCTTTGCTAGT-CCT-TCAT----TGAAAT-CACAGCA-GTTTGATAA-ACAG-CCTCATTT-TGGATAGATCTGCAAATGACT-CCGTG-AAGGAAAAGAAGCCTTT-GGCAACACTGCTG------GACAACAA-AATGAAGAATAAT-ACA--A-AATTATGGTA-TAGTTAATA---ACAA-AGCTAGACCCCTCACGGCCAATAGGCATT---GGCAGTAGGTGC-A-AAATGCAACATTT--TGGGGGTCCACATATAAATTTACGACAT-CGGAGTGCGGTCATAT-----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAAGTT--AA-AAATCAA-ATC--AAAA--ATAA--TTGAG----------T---ACTATT-A--TAAGATCCCAACTCTAC-----ATTTTACAATTCCA-TTTC-AAACTGGACTCGGT-GTAGGA--GCCGGCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-CTTGGCAC--AGAAAT-CATAAATCT-CAAAAA--TATTCGTCGAGGCTTGATCT-AT-NNNNNNNNNN-N----NNNNN-NNNNNNNNN-NNNNNNNNNNNN-N-NNNNNNN-NN-NNNN-NNNGAAG-A---AA--GGGGAA-------CA-GTCCAA-----AC-AAATC-TCGCTGTGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACAC-GTAAAA--ATAAC--TGTACTCATATAAA-AC---TTCTGGATATCC-TCTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCATGTT-TTAACA-GCAATCAA-AGG-C-GCAAGTCCTG-AAT-CT-GT-TAC-AAACGCGCGCG-------CATTC-TCTGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-C-AAATGTGACGC-ATAACACA--C-CGATTGC--TTTTTTTGA--C--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TACAGTTTCTG-TCCAACGGTTAATTATGA-TCATAT-TGGTATTG-A-ATTT--CCT-ATTTGCATTT--CTGA--TGAAA-------GAATTATT--AA-----TCAAGTTG-ATT------TAGATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GT-----T-----------------AAATCAAAA-AAAAAA-A-AAAA------TC-T-TATA-CAT--GTAGTTAC--------------AAAATTTT-A-AAAT-A--AA-ATTTCA-----------------------TACTATATAATATA-A-TATATTGT---AAGCTA-GCT-------GCTTGCACTTGTCAAG--TGTTGCAGAAAGTTAGATAT-T----AGGAGACTAAA-TGGATCTGAA-CTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAATCT--GCT-----A-G-TG-AAC-T-GCTAAGAATTAACTGCTTAT-CTGAATTTCTTAGCAGTTTACAAGTAGTAGT-AAAA-CCACAAGCTGCTTGGA-A-CTG--TTAGAATA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-C---GCCTTTA--GC-AACTG---CTAAA--ATAGAGC--A-GTT-CA-TTCTTTCCTTGGga
gi|20 : AT-TGAA-CTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----A-G-TGAAAC-T-GCGAAGAAATAACTGCTTATACTATA-TTCTTAGCAGTTTACATGTAGTAGT-AAAA-CCACAA-CTGCTTGAA-A-CTG--TT---------------TAAA--------------------AAC-TG-CCACAG-AA-CT--GCC--TATAGA-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTAG
gi|21 : taaA-CCCTATCAAAATCAT-GTGT--AAATAAT-CTATGGAA-TAAGCAAT--ACACTGCTCAA---CAATAGGAGAGTT-----AT---AG------A----AAGAAACAAACAAC--AAGAAAACA-AAAATT-GTTAATT-AATTTTTTA--TC-A-CATTC-TTATTT-CATTTAAGAAC-ACA-AACTTTA--CATTTTTTTCgt
gi|23 : gctaatatacaatttcTACTGAA-TTCTTAGCAGT---CAAGTAGTAGT-AAAA-C-ACAA-CTGCTTGGA-A-CTG--TTAGAAAA-----CTGCCAAATA--AT----CTC--AT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|24 : --TAAACTTTAC-----AAATATG-TATGTTAA-TTC--ATATTTATAC-----TT-T--AT-TACAGTAACGGT-----------------AAATCAAAATAAAAAATA-AAAA------TC-T-TATA-CAT--GTAGTTAC--------------TAAATTTT-A-AAAT-A--AA-ATTTCA-----------------------TACg
gi|25 : T--TA----AAACAACA-GAG--GATG-AATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATTAA-A-C--AAAA--GTAA--TT-AT----------TATAA----T-A--TAAGATCCCAACTCTAC-----ATT
gi|26 : A--GACTGTCAT-TT-T--ACA-GCAATCAA-AAG-CAACAA-AACAA-AA---T-G--CA--AAACGCGCGCCATAAAAGCAGG-----GCAC-AG-AGTT-ATCGGTC-CTTTCTCTTATT-T-
gi|27 : TACCAGTTTACCC-TAGTAGT-AAAA-CCACAG-CTGCTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AT----CCC--TT---AAC-TG-CCAAA
gi|28 : AGATAT-TT---AATACATTAAAATAAAT-TGAA-CTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----A-G-TGAAAC-T-G
gi|29 : ATGCGAT--CTCACAGAA-TTAAAGACA-TT--AA-A-------------------TAA--TTGAG----------C---A----TTG--TAAGATCCCAACTCTAC-----ATT
gi|3 : TCCAG-GAA--TTATTCAAAC--TCATT-AAATG-ATT----AA-TTCCATACGAC--TGAAGATTACTGGAAAC-CCTCAGATAAACTGCCCCAGAATCTCT-T-CGAAAT--A-A----A--AG-CTGTGTA---GTATATGATCCA-TATAACTTGTCATCT-TATAGAATTACAGTCATAATCCAAGA---AC-AAC-GTTCAG-ATTTT-AGTCCAAACATA-----ATAATCCA-CAC----ACTTGTCAGTT-CCGTCCTATT--TTT-TATGCATA-GTTCA-GAACTCTGAGTGCGC--C----------GATACA-AA-GTCGTGAAATCA--CATTT--GT--CGCAGTCTCTTCAT-AATTCTGATGTCACGTCGACCCGCAA-TGCGCAAGGTAAGGA-TAAT---AA-GACTA--ATGTGC------AAT-TCT-TCAT----T----T-CACA--AAG-TTGATAA-ACAT-CC-CATTT-TGC-TA-ATCTAC--ATGACT-CCACG-AA-GAAAAG-AGC---T-GGCAACACTC-TGAAAAA-GA-AATAAGAATTGAAAATAAT-ACA--------ATGATATTAATTTATA---ACAA-AGCT--------TATAA-CAAT----ATTATGGGC--TA--TG------ATGCAACATTTGTCGGGGGTCCAAATAT---TTTA--ACATACGGAGT--GTTTATATATAGTCAT--TA----AAACAACA-GAGGAGATG-AATGCGA--TCTCACAGAATTTCAATACA-AT--AATAAATCCA-A-CCAAGAA--ATAA--TTGAG----------T---A------A---GAGGTCCCAACTCTAC-----ATTTTAC--TTCCA-TTGCAAAAATGGACTCGGT-GTAGGA----C-GCG--CCGCACCGAGGGCCTTTCGTCCCGGGGTCCTCGTT-CT--GCAC--AAAAAT-CA-TAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACAGAGTCCTAGTAATGAGAAACATT-A-GCTTCGA-CG--ATC-TCGGAAGAA---AA-TCAAGAA--------G-G--CGA-----CCATGGCCGTCGCTGAGATTAATAAAAAAT--ATCCAGTCTCATGGCA---ACGGT-TAA--AT---------CTAGGAT-AA-AC---ATCTG
gi|3 : cgACAGT-AAA--ATGAC--TGTA---AAAT-TA-ACTTTATCT---TATTCGCCTATCG-AACAGCCAAG--CTTACTAGTCTAGGATCCAA---TTGCTTTGATC-CACT-A--GACTGTCAT-TTCT--ACA-GCAATCAA-AGGCC-GCAATTCCTGTAATGCT-GTCCAATAAACGCGCGAC-------CATGCAT-TGCAC-AGTGGTT-ATC-G----------GTATT-G-A------ACGC-AGAAAGCAC-CTCGA-TGC--GTTTTTT-AACC--AGAT-CG-ACGTAAAATGACAC-G-AATATCTTT-AAAA-C-T-AATTTGA--TATAG-TTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTTTGTCTAA-TTGCACTT---TGG--TGAAACTGTTGTAAATTATATCAA-----T-AAGTTG-ATT------TAAATAA-TTTATAAACTTTGC-----AAATATT-GATGTTAATT-C--ATAA--ATAC-----TTGG--CTATA--GTAAAT-T-----------------AAATTAAAA-AAAAAA-A-AAAA------TCGT-TATA-TATCAGTAGTTAC--------------AAAA--TG-G-AAAT-ACCAATATTTCAC----------------------CACCA----ATATATtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|3 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaGCTTGGATA-CTGG-TTAGAAAAGAAAACTGCCCAATATTATAGTCCTC--TT---AAC-TG-TCTATA-GA-CA--GG---TA-----AACTGGCTCTAAG--ATA-AGCTCATGTT-CA-TT-TGTCCTTGGtttagggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataaAGAAGCTTGTTCCAACACTCA-T-AA-TG-ATT----AA-TTCCA-AC-ACATTGAAA-TTGATG--AACACC--AGATAATCTGC---AGAAATTCT-TTCGAA-TT-A-AT--AA--AG-CTGTAGTTAT-TATAT--TC-AGTTCA-CTTGT--TC--AATA--ATTACAGG-----T---ATATT-CCCAAC-AACCGTTAGGTT-TATCCA--AATA-----A--ATC--ACAT----TC-----GGTT-CCGTCC-ATT--CTT-T--TTGCAAGTTC-CAAACT---AGTGC----------------AT-CA-AAAGT--TGAAA-CATACATTT--GTTCCGCAG---CTTCATTA-TTCTGATT-CAC-TCGGCCCGAAAGAGT-TAA----AGGA--A-T---AAGAACTATGGTGCA-------AGTTCCTCTCAT----T----TTCACA--A-G-TTGATAACACATGCC-CATTTATGGATA-ATCTAC--ATGACTTCCACGTAA-GAAAAG-AGCC-CTAGGCCAAACTCTTGAAAAAAGA-AATAA-AATTGAAAATAATCACA--T-GGTTATAAT--TAATTTATA---ACAA--GTTATA---------AACAAT----ATTAATGGT-ATG-GTGC-AGAAATGCAACATTTT---GGGGTCCATAAAT--ATTTT--ACAT-CGGAGT--GGTTATATA----TATCTTA----AAACAACA-GAG--GATGGAATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATCAACA-C--AAAA---TAACCTTGAG----------T---A----------AGGATCC--ACACTACTAACAATTTTAC-AT--CAGTTTC-AAA-TGGA-TCG-T-GT-GGA--GCC-G-GTTCCG-C-CGAGGGCCATTCGTCC--GGGTCCTCGTCATTA-GCAC--AAAAAT-CATTAATCT-CAAAAAAATATTCGTCGAGGCTTGATAATATACTT-GAAGAC-GTGTCCGACA-AGTCCA-GT-A--ATGAATAT--A-GCTTCGA-CG-AAT--TCGGAAG-A---AC-TCAGAAGGCGACATCGCGTCAAA-----ACAA--TT-TCG-TGAGAT----------------CAGTCT-ATGAA-TACACAGT-AAA--AT-AC--T-TACTTA-------AC---ATCTGGATATCC-TCTATAG-AA-AGC--AGACCT-AC--ATATAG-ATC-AAATATT-CTT-G-TCGCACTGGATGACTGTCAT-TT-T--ACA-GCAATTCA-AAG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------AATGC-TATGCAC-AG-AGTTA--T-GTC-TTTT---TAATT-T-GAAT-TGACGCAATAACACACGC-CG--TGCTTTTTTTTTAAACCCGCGATCCGCAC-T-AAATGACAA-G-AATATCTTTCAAAA-CTT-AA-TTGAA-TATG--TTCTG-TCCAACGGT--ATTATGA-T-ATAC-T-GTATTG-A-TTTG--CCT-A-ATTCATTT--CTGGTTTTGAA-------AAATTAT---AA-----TCAAGTTG-ATTTTTTTATAAATAATTT--TAAAC-TTGC------AATATG-TATGTTAATT-C--ATAA--ATAC-----TT-----T-TA--GTAA--------------------------------------------------------ATA-CAT--GTAG-TAC--------------AAAATTTTCACAAAT-A--AA-ATTTCA-----------------------CA-------------A-TATATTGT---AAGCTgttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : aGCTTGGA-A--TG--TTAGAAAA----ACTGC-AAATA--AT----CTC--CTTTAAACGTG-CCAAAG-AA------------------ACTG---CTAAA--ATA-AGC--A-GTTACA-TT-TTTCCTTGGtggaatgttagaaaaactgcaaataatctcctttaaacgtgccaaagaaactgctaaaataagcagttacatttttccttgggttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : aagaagcttgttccaacactcataatgattaattccaacacattgaaattgatgaacaccagataatctgcagaaattctttcgaattaataaagctgtagttattatattcagttcacttgttcaataattacaggtatattcccaacaaccgttaggtttatccaaataaatcacattcggttccgtccattctttttgcaagttccaaactagtgcatcaaaagttgaaacatacatttgttccgcagcttcattattctgattcactcggcccgaaagagttaaaggaataagaactatggtgcaagttcctctcattttcacaagttgataacacatgcccatttatggataatctacatgacttccacgtaagaaaagagccctaggccaaactcttgaaaaaagaaataaaattgaaaataatcacatggttataattaatttataacaagttataaacaatattaatggtatggtgcagaaatgcaacattttggggtccataaatattttacatcggagtggttatatatatcttaaaacaacagaggatggaatgcgatatctcacagaattaaataaattaaaaatcaacacaaaataaccttgagtaaggatccacactactaacaattttacatcagtttcaaatggatcgtgtggagccggttccgccgagggccattcgtccgggtcctcgtcattagcacaaaaatcattaatctcaaaaaaatattcgtcgaggcttgataatatacttgaagacgtgtccgacaagtccagtaatgaatatagcttcgacgaattcggaagaactcagaaggcgacatcgcgtcaaaacaatttcgtgagatcagtctatgaatacacagtaaaatacttacttaacatctggatatcctctatagaaagcagacctacatatagatcaaatattcttgtcgcactggatgactgtcattttacagcaattcaaagcgcaatcctgaatctgtcaaaacgcgcgccaatgctatgcacagagttatgtctttttaatttgaattgacgcaataacacacgccgtgctttttttttaaacccgcgatccgcactaaatgacaagaatatctttcaaaacttaattgaatatgttctgtccaacggtattatgatatactgtattgatttgcctaattcatttctggttttgaaaaattataatcaagttgatttttttataaataattttaaacttgcaatatgtatgttaattcataaatacttttagtaaatacatgtagtacaaaattttcacaaataaaatttcacaatatattgtaaT--TA----AAACAA-A-GAG--GATG-A-TGCGAT-CCTCGCAGAA-TTAAATAAA-TTTAAA-AAATCAA-AAC--AAAA--ATAA--TTGAG----------T---A------A---AAGATCCAAATCGTAC-----ATTTTAC-ATTCCA-TTTC-AAAA-GGACTTGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCCCTTCGTCCC-GGGTCC-CGTC-TT--GCACCAAAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATAATTCGAAGACGG----CGACA-AGTCCAAGT-ATG--AAATATTAA-GCTTCGAGCGAAATCTTCGGAAG-A---AACTCAAGAA-------GG-CCCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATCAAT-CAGTCT-ATGAAATACGCAGT-AAA--AT-AC--T-TACTCATAT--A-AC---ATCTGGATATCC-TCTATAGAAACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-C-TTG-T--CACTGA--GACTGTCAT-TT-T--ACAGGCAATCAATAGG-C-GCAA-TCCTG-AAT-CT-GT-C---AAACG-GCGTC-------CATGC-T-TGCACAAG-AGTT-ATCGGTC-CTTT---TTA---T-GAAT-TGACGC-ATAACACAC-C-CGAATGC--TTTTTTTGAA-C--CGAT-C---C-T-AAATGACAC-G-AATATCTTTC-AAA-C-TAAA-TTGA--TATAG-TTCTGTTCCAACGGT--ATTATGA-T-ATATATGGTATTG-A-TTTT--GCT-A-TTGCATTT--CTGGGTTG----------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGCA----AAATATGTTATGTAAT-T-C--AT----ATAC-----TT-T--CT-TA--GTAAAT-C-----------------AAAAAAAAA-AAAAAA-A-AAAA------TC-T-TATA-AAT--GTAGTTAC--------------AAAATTT----AAATAA--AA-ATTTCA-----------------------CAATATATgttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : gGCTTGGA-AACTG--TTAGAAA------CTGCCAAATA--AT----CTC--TT---AAC-T--CCAAAGAAA-CT--GCC--T-----------------AA--ATA-AGC--A-GTT-CA--T-TTTCCTTGGgtaaggcttggaaactgttagaaactgccaaataatctcttaactccaaagaaactgcctaaataagcagttcattttccttggtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|6 : gttaaaacaaagaggatgatgcgatcctcgcagaattaaataaatttaaaaaatcaaaacaaaaataattgagtaaaagatccaaatcgtacattttacattccatttcaaaaggacttggtgtaggagccgcgccgacgagggcccttcgtcccgggtcccgtcttgcaccaaaaaatcattaatctcaaaaatattcgtcgaggcttgatctaataattcgaagacggcgacaagtccaagtatgaaatattaagcttcgagcgaaatcttcggaagaaactcaagaaggccccaaacaaaatctcgctgagattaaaaaatcaatcagtctatgaaatacgcagtaaaatacttactcatataacatctggatatcctctatagaaacagcagctacatatagatcaattcttgtcactgagactgtcattttacaggcaatcaataggcgcaatcctgaatctgtcaaacggcgtccatgcttgcacaagagttatcggtcctttttatgaattgacgcataacacacccgaatgctttttttgaaccgatcctaaatgacacgaatatctttcaaactaaattgatatagttctgttccaacggtattatgatatatatggtattgattttgctattgcatttctgggttgaaattataaatcaagttgatttaaataatttaaactttgcaaaatatgttatgtaattcatatactttcttagtaaatcaaaaaaaaaaaaaaaaaaaatcttataaatgtagttacaaaatttaaataaaaatttcacaatatatgtaagTAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT-AC-AAC-GATA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|7 : TAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT-AC-AAC-GATA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtctctacacagacacgacgatcaaagt
gi|8 : TGCACTTGTCCAG--T-TTGCA-AA-GTTAGATAT-TTATTAGGA--CTAAA-TGAAT-TGAA-CTGCT----T-----T------TAAAAAATATA--AT-AACTGATAGACTCAGCTTAATAA-G-TGAAAC-T-GCTAAGAATTAACTGCTTATAATGAA-TTCTTAGCAATTTACAAGTAGTAGTAAAAA-CCACAA-CTGCTTGAA-A-CTGTTTTAGAAAA----ACTGCCGAAGA--ATAA--CTCAATT---AAC-TC-CCAAAG-AA-CTTGGCC--TA--GC-AACTG---CTAAATGATA-A-C--A-GTT-CATTT-TTTCCTTGGtctctacacagacacgacgatcaaagt
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): AGCATTCATTTTTCGCTTCCGGTAACCCTGTAACAGAAAGTCCAAGCTTTTTGTTGCACATATACTTTTTAAATCACTATAGTTCCCTGAAAACAATATAGATGTCCTGCATTGTCTTAAATATATCATGTGTGAGACTTTAGGGAAATTTGAGGGACCTTATAACTTTTTATTTTCAATTCAGTTAAGTCCTGAAAACAAAAGAAAGTCCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTGCAGGACAAATTTGAGTCTACACAGTTTCTACAAAGTCACAACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTTCTGAATTTCCTTGCATTAGGACAGGAGAGATTAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATATGCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Unaligned ( gi|11 ): GTGCAAGACTTTTTGTTGCACATACTTTTATCAACAAGTCCTGAAAAGCAATGTAATATGTCCTACATTTTCCTGAATATATCATGTGTGAGACTTTTAGGAAATTTGAGGGACTTATAACTTTTTTTTAATTTCATCAGTAAGGTTCTGAAAACCAAAAGAAAAGTCCTGTAAAGACCTCTGCAGTGAGTAAGTGGGCCATTGTGCGAGGACATTTGAGTAATGTATTTGTCCTACAAGTTCCTAAAGTCACACTATGTTATGGGTATATTAAAGGATCAACTGCACAGGAATAAGAAGTCCTGAACTTATCCCAACTGCTAGGAGAGAGAAGTGGACTGGAAAAAGGAAGTCTGGGACTTCCAGGGATATTTCAAATTTCAACGAAGTGGGATTTATTTTTGGAGG
Unaligned ( gi|12 ): AATAAACGCATTCATTTTTCCTTGGGTAACCCTGTACAGAAAGTCCAAGACTTTTTGTTGCATCATATACTTTTTAATCACAAGTCCTGAAAAGCAATATAATGTCCTGCATTGTCTTAAATATATCATGTTGTGAGACTTTTAGGAATTTGAGGGACTTATAACTTTTTATTTCAATTCAGTAAGTCTCTGAAAACAAAAGAAAGTCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTTGCAGGACATTTGAGTCTACAAGTTCTACAAAGTCACACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTCATGAATTTCCTATGCATTAGGACAGGAGAGAAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATA
Unaligned ( gi|13 ): GCTTTTAGGACACCTCTGTACAGAAAGTCCAAGACTTTTTGTTGCACATGCTTTTATCAACAAGTCCTGAAAAGCGATGATAATGTCCTGCATTGTCCTGAATATATTCAGCTGTGAGGAACTTTTTAGGAAATTTGAGGACTTTTATTTCATCAGTAAGTCCTGAAAAACAAAAGAAAGTCCTGTAAAACCATCTGCTGTTGTAGTGGGAATTTGCAGGATATTTTGAGTAATTGTATTTTGTCCTACAAGTTGATATTCAAGGGCAAATTGCAGGAATAAGAGCCTGAATTATCCCACTGCTTAGACAGAGAGATAGTGGGACGGAAAAGGAAGTCTTCAGGATTCCAGGGATTATCCTTAAAATATTCAAGAAAGTGGGATAATTTTTTGGCAGGGA
Unaligned ( gi|22 ): ATGTTACTGGGATATTTAAGGAGAATGGCAGAATAAGAAGTCTGAATTATCCACTGCATTAGGACAAGAGACTCAGTGGACTAGGATAAAGGGAAGTTCAGACTTCCAGGGATGATTCCTTCAAATATCAGAAAGTGGGATTTATTTTTGGAGGG
Unaligned ( gi|30 ): GGGATATCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111
lowQualScore : 1 444444444444444444 111 1 1111 11111 1 2 11 1 2 2222222 22 11111 11 22 1 1 1 1 2222 11 11 1 1 111 1 2222 11 222 11 1 11 222 111 1111 1 11 1 1 11 1 11 11 111 11 1 11 1 1 22 1 1 11 1 11 111111 11 2222 1 111 3333 2222222 222222 2222222 22222222 11 11 11111111 11 33333333333 11 1 11 111 777777777777777 1 1 1 11 1 11 11 11 111 222 1 1 1 1 3333 22222222 1 4444444 1 1 44444444444 1111 1 1 11 1 1 1 11 11 1 1 1 22222 22222 1 1 333333 11 111 11 777777777777777777777777777777777 11 1111 222 222 1111 1 11 33333 1111 111 111111 111 6666666666666666666666666 11111 11 11 11 111 2 11 11 11 11 111111 222222 1111 11 11 1111111 444444444444 22222 1111 11 2222222 1111 111 11 11 11 111 1 11111 22222222 111 22 1 111 1 11 11 1 1 1 44444444444444 111 11111 111111 11111 111 11111 1111 11 555555555555555555555555555555555555555555555 33333333 1 1111111111111111111111111111111111111111111111111 11 11 2222 22222222222222222 11111 1111 11111
lowQualScore : 6 3 7 999999999999999999 7 77 0 8 000 1 8 0 2222 99999 11 3 0 99 8 0 0 8 0 66 11 1111111 8 8 8 11 8 22222 88 11 66 44 0 0 0 0 0000 2 22 33 66 3 0 3 0 3 5 666 0 1111 1 33 444 0 33 44 0 8 6 6 0 11 111 66 0 444 1 7777 55 3 77 8 0 0 11 0 8 8 99 0 0 11 0 5 11 0 1 33 777 33 0 33 1 0 0 9 33 0 1 0 999 2 9 33 0 11 222222 1 3 3 2 44 0 6 5555 7 6 6 99 44 99 6 99 1 000 1 5 5 5 1111 888 77 5 9999999 5 55 5 5 5 000000 99 6666666 99 6 88888888 88 00 66666666 00 55555555555 6 6 88 3 22 77 33 777 000000000000000 1 0 0 0 33 0 33 33 33 2 777 333 99 5 0 0 0 0 1111 22222222 0 555 9999999 0 0 66666666666 4444 0 3 0 00 0 0 3 0 33 33 44 0 0 0 66666 7 7 22222 0 3 0 555555 33 7 777 33 333333333333333333333333333333333 22 9999 2 999 3 1 000 4444 2 0 33 66666 99 4444 6 99 6 5 333 5 5 77 5 333333 111 77 1111111111111111111111111 0 44444 88 0 8 8 66 8 0 11 8 11 111 4 33 0 8 99 11 8 0 8 11 6 0 7 2 777777 8 2 111111 1111 8 00 88 8 9999999 888888888888 00000 0 3 8 4444 33 8 8 11 1 6 99 6666666 1 7 5555 111 8 1 8 11 11 8 11 8 8 444 8 0 0 8 8 99 6 6 99 6 6 6 6 3 6 6 6 77777 44444444 555 6 6 00 1 5 000 888 3 6 77 6 44 99 9 2 99 6 6 6 6 6 6 6 6 6 6 88 1 1 7 99 6 6 6 3 6 6 99 6 3 99 00000000000000 222 66666 5 666666 5 5 66 0 77777 5 333 77 1 77 44444 5555 5 55 666666666666666666666666666666666666666666666 555 5 77 9999 5 5 77 5 5 00000000 99 3 0 8888888888888888888888888888888888888888888888888 11 8 11 3 6 0000 777 5 1 5 5 33333333333333333 4 66 1 66 55555 4 8 5 4 4 4 4 4 3 3 77 4 1 6666 44 0000 44 555 3 3 3 44444 77 00000 555 77 3 44 3 3 3 3
lowQualScore : . . . .................. . .. . . ... . . . .... ..... .. . . .. . . . . . .. .. ....... . . . .. . ..... .. .. .. .. . . . . .... . .. .. .. . . . . . . ... . .... . .. ... . .. .. . . . . . .. ... .. . ... . .... .. . .. . . . .. . . . .. . . .. . . .. . . .. ... .. . .. . . . . .. . . . ... . . .. . .. ...... . . . . .. . . .... . . . .. .. .. . .. . ... . . . . .... ... .. . ....... . .. . . . ...... .. ....... .. . ........ .. .. ........ .. ........... . . .. . .. .. .. ... ............... . . . . .. . .. .. .. . ... ... .. . . . . . .... ........ . ... ....... . . ........... .... . . . .. . . . . .. .. .. . . . ..... . . ..... . . . ...... .. . ... .. ................................. .. .... . ... . . ... .... . . .. ..... .. .... . .. . . ... . . .. . ...... ... .. ......................... . ..... .. . . . .. . . .. . .. ... . .. . . .. .. . . . .. . . . . ...... . . ...... .... . .. .. . ....... ............ ..... . . . .... .. . . .. . . .. ....... . . .... ... . . . .. .. . .. . . ... . . . . . .. . . .. . . . . . . . . ..... ........ ... . . .. . . ... ... . . .. . .. .. . . .. . . . . . . . . . . .. . . . .. . . . . . . .. . . .. .............. ... ..... . ...... . . .. . ..... . ... .. . .. ..... .... . .. ............................................. ... . .. .... . . .. . . ........ .. . . ................................................. .. . .. . . .... ... . . . . ................. . .. . .. ..... . . . . . . . . . . .. . . .... .. .... .. ... . . . ..... .. ..... ... .. . .. . . . .
lowQualScore : 7 3 3 000000000000000000 3 44 8 0 222 4 0 6 6666 88888 88 6 4 66 0 6 0 0 8 44 66 6666666 0 0 0 00 0 22222 66 00 44 00 0 0 0 0 8888 0 55 88 55 2 0 2 2 2 5 222 0 2222 0 22 111 8 00 66 6 0 0 0 8 00 666 44 8 000 0 0000 66 8 22 0 6 8 00 6 0 0 00 6 6 44 8 4 00 8 0 88 555 88 0 88 0 0 0 8 88 0 0 0 000 5 2 22 0 22 888888 0 2 2 5 00 7 7 8888 3 7 7 22 88 22 7 22 4 000 7 7 7 7 3333 000 99 7 6666666 0 99 7 7 0 999999 22 8888888 88 7 33333333 33 33 88888888 55 77777777777 7 7 33 3 77 77 00 555 222222222222222 0 0 0 0 88 0 88 88 88 5 555 222 88 5 0 2 0 0 2222 88888888 0 000 0000000 0 0 88888888888 8888 0 2 0 88 0 0 2 0 88 22 55 0 0 0 22222 0 0 55555 0 2 0 000000 22 0 555 22 555555555555555555555555555555555 55 5555 5 222 2 0 888 5555 5 0 88 88888 22 2222 7 22 7 0 333 7 7 99 7 000000 444 99 9999999999999999999999999 7 33333 88 8 0 0 22 0 8 00 0 00 888 0 00 8 0 00 00 0 8 0 00 0 8 2 2 222222 0 8 222222 8888 0 88 22 0 4444444 444444444444 00000 8 8 0 8888 00 0 0 66 7 7 22 8888888 0 5 8888 777 0 4 0 00 00 0 00 0 0 000 0 8 8 0 0 22 7 7 22 7 7 7 7 3 7 7 7 00000 22222222 000 7 7 55 4 7 000 000 3 7 77 7 88 22 3 5 22 7 7 7 7 7 7 7 7 7 7 33 3 7 3 22 7 7 7 3 7 7 22 7 3 22 00000000000000 777 77777 7 444444 0 7 99 4 55555 0 999 99 7 99 33333 0000 7 77 444444444444444444444444444444444444444444444 999 7 99 4444 7 7 99 7 7 77777777 22 2 0 8888888888888888888888888888888888888888888888888 00 0 88 8 7 8888 333 7 7 0 0 66666666666666666 4 11 0 11 66666 4 9 9 4 0 0 0 0 1 1 33 3 5 5555 22 8888 22 444 1 1 3 88888 99 88888 888 99 3 66 3 3 3 3
consensus : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A-AT--AA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT-AC-AAC-GACAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-C--C----------GNT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACA-AGTCCAAGT-ATGATAAATATT-A-GCTTCGA-CG-AATC-TCGGAAG-A---AA-TCGGGAAG--CG-------GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATAT-AA-AC---ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-CAC--------TATAT--TATATATAT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
Reference ( family-657 ) : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A-AT--AA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT-AC-AAC-GACAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-C--C----------GNT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACA-AGTCCAAGT-ATGATAAATATT-A-GCTTCGA-CG-AATC-TCGGAAG-A---AA-TCGGGAAG--CG-------GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATAT-AA-AC---ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-CAC--------TATAT--TATATATAT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|1 : AGTG--AGGCA-GTT--GTAGCAGTTATTAAGCCTTCCCAGTTGTTAC-TTGCCTAGGC-GTTTATTTTAGCCGTTCCTTA-CCTT-CCTTAGCCAATCTTTTCTATTCTGG---AAGTAATAA-AATTA--CATTTAAAATAAGCGA-ATACAGAGAGATATTTTTCTTTA-GCCTTACC-AGTT--CGT-AAGC-----A-GTAC-TGAGAGCAGCTTATTTTCA--GC-GAAAAATG---TAATGAGATTGAGGAA---ACT-GCT-AG-CAGACTGCTTAGGAATCTGCTAAGT----CATTC--ATATAATTGGTAGTGT-CTAATGAATATTCA-GGCAATACAATGAGGAT-TTA-CTAGTAG-CAA---TG-CTAGCAATAGGAGATTTACAATTCTTCACA--TTAAAA-CACTATTAAAA-CAGTGTGTTCCA-GAATACTATGGTATTA-GCAATTAACACTATTCAAAGTTTATA------TCTAATG-----GGGAAATAATAATAAAAAAAAAACAATCAAAGAAAATAT-AAATT-GTAAATTAA-TTATTTAGTTCAATCATTT-TTGTT--CATTTCAGAACA-CATAAATCTAATTATTTTTTTTCCCATATCAAAAATTGGAAAAGAG---AAAAACT-AATGAA--TGTTGACTAAATT-TAATGAAACAAAAATTTCATTTAGATTTCGTCTATTGTAAGTATATAT---AATACA-TGATA--CATCCACAT-TGAACTTCCAG------TTATTCAT---CTCAGTTAAACGCACTTTTAAAATTCCA-AC-AC--TGAA--TTGATGCAAAA-CC--AGACAA-CTGC---CGAAATTCT-T-CGGA-TCAATAT--AA--AG-CTGT-------TGTAT-ATT-A-TTCA-CTAGT--ATC-AATA--AATATTGA-----TCCAATATTCAC-AAC---CAAGCAGTTTTAATCCAC-AATATCCACA--ATCCA-C-T----AC-----AGTT-CCGTCA-TTT--TTT-TATT-GCA---TCAC-AACT---AGTGC-C--TATGTTTCTATGTT-TA-AA-GT--ATTAA-CA--CATTTATGT--C-CAG---CTTCAT-A-TT-AGATT-CAC-TCGGCCCGGAA-AGT-CAGC---AGGA-TA-T---AA-AACTATATTGTGCTTGC-TAGT-CCT-TCATGAAAT-------ACA--A-G-T-GATAA-ACAC-CT-CATTT-TGGATA-ATCTGC--ATGAT------G-AA-GAAAAG-AGTC--T-GGCAACATTCTTGGAAAC----AACAA-A--TGAAAATAAT-ACATTACAATTATGGTA-TA-TTTATATAAACAACAGCTAGATCCT-CACG-CCA-T----AT----GGCTATA-GTGCCA-AAATG--GCATTTG-TGGGGG-CCAAATAT--GTT-A--A-AT-CGGAGT--GGTTATAT-----CAT--TATTTAAAACAACAAGAG--GATG-A-TGGAAA-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAAGAATA---TTGAGAGTCTTAATGT---A----T-AAATAAGATCACACTTCTAC-----ATTTTAC-ATTCCA-TTTC-AAA-TGGACTCGGTAGTAGGAAAGCC-GCG--CCG-A-CGAGGGCC-TTCGTCCG-GAGTCCTCGTC-TT--GCAC--AAAAATTCATTAATCTTCAGAAA--TATTCGTCGAGG-TTGATCTAATACTTGGAA-AC-G----GCCCA-AGTCCAAAT-A--ATAAATATT-ATGCATCGA-TG-AATCATCGGAAG-ACTCAA---GGGAAGACCA-------GTCCAATATTAACAAAATC-TCTCTGAGAT---TGAAAAATC-AT-CAATCT-ATGAAATACACAGT-AAACAAT-ATCTT-TACTCATAT-AACAC---ATCTGGATATCC-TTTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-CA---TT-CTTTG-TC-CACTGA--AACTGTCAT-TT-T--ACA-GCAATCAA-AG--C-GCAA-TCCTG-AAT-CTTGT-TA--AAACGCACGCC--------ATCC-T-TGCAC-AG-AGTTA-TC-GTC-CTTT---TTATT-TTAAATATGACGC-ATAACACAT-C-CGAT-GC--TTTTTTTGAACC--CGAT-CG-AT-T-AAATGACAC-GCAATATCTTTCAAAAAC-T-AA-TTGATACATTGTTC---TTTCAACGGT--TATATGAAT-A-AT-T-GTATTG-A-TTTC--CCT-A-TTG-ATTT--CTGATT---GA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AA-TATG-TATGTTAA-TTC--ATAA--ATAC-----TT-T--CT-TATAGTAA---CGAGTATACAAAA-AAGAAAAAACAAAAA-AAAAAAAAAAAAAAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAATT-A--AA-ATTTCA-TACTGAAACTTTATATGATATATATAT-ATATTAATATATTATATTATATATAATATTGTA---AGCAAAGCTACATGTAGCTTGCACTTGTCCAG--T-TTGC--AAAGTTAGATATAT----AGAGGACCAAG-TGGAT-TGAAACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAAACT--GCTA----AG-TGAAACTTGCTAAGAATTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAATAGTAGTT-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGGAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-TACTG---CTAAAT-ATA-AGC--A-GTT-TA-TT-TTTCCTGGG
gi|10 : ttaaagtgtgagatatgatattgcgaacccattcCGAGTCG-ATT------TAA---------TAAACTT-GC-----AAATATA-TATGTTAA-T-CTCATTA--AAACCAAAGTA-TAACT-T---GTAA----GATT---CATAA-TC---------AAAT-AT----------AAAATC-TCTATAGCGT--TTAGTTACAAATTTTT-A-AA--T-A--AA--TTTTA-TAT--------GATAT--TATATATATTATATT-------------------------ATATAAAGC-TAGCT-------A-TTGCACTTGTCCAGTTT-TTGCA-AAAGTT-GA-AT-T----AGG-GACTAAA-T-GCT-TG-AACTGCTAGAATAATAAA------TAACTGGTATCTTGTAAA--GGTAGAT----CT-----AGTTGAAACTTGCTAAGAA-TAA--GCTTATACTGAA-TTCTTAGCAGTTTACAAGAAGTAG-T-AAAA-CCACAA-CTGTTTGGA-A-CTG--TTAG--AA----ACTGCCAAATA--AT----CTC--AT---AAC-TGCCCAAAG-CATTT--GCCT-TA--GCAAACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTa
gi|14 : AAA--GAAT-TG-AACTGCT----T-----ACATGTATAACTGGTATCTTGT-GA--GGTGTACT--GCT-----AG-TAAAAC-TGCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CAACAA-CTGCCTGGA-A-CTG--TTAG-TAA----ACTGCCTAATA--AT----CTC--TT---AAC-TG-CCTAAG-AA-CT--GCC--TA--TG-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|15 : ttattctaaataacttttctaactcgatcattcaataaaaaaaagtttagaattttttttttctttcattagactggaatttgcaaaaataaatgcaagctagttgtgagatctggctcttatgtgttaaaaatgctagccttatgataaccagttccactttgc-CTGC---ATAA---TT-T-CGAA-T--A-AC--AACCAGACTG-GCA-ATGTATGT-GTC-G-TTTAATTTTT--TCg
gi|16 : aagacaaaagaaaatcctCATGTCAAAGTGGAAGGCA-GTTTGCTAGCAGTTATTAAGCCTTCCCAGT-------------------TTTATTTTAG-AGTTCCCTAACCTT-CCATA-----------CTCTTCTGAC-AAATTGGTG------------GAAA--CAAG-CA-GTTCAA-AACA-GTTTTTC-TTA-GCTTTCCC-TGTTT---TTAACCAGTAGATCTAC-TG-GAGCAG-TTATTTTC--AAT-GAAAAAT-GTA-AATGAGAT-GAAGA--AAAC-TGCTgaatccaatattgatagtttcttcaccaagttcctacaaagtccatcatttaaatgttactgtgcgagtagtttttaaggacacattagtaagacgagggataagtataagtccctgaaaaataatctaatggagccactgctcagatctaggacagagagaagttatgaggatatgtagaaataaagtgggagtccagggacttccagagcgatatcctttcaaaatattcagaatgacgaagtacctacagttgtggatttagatttttg
gi|17 : ttaaggtgacaaaatatgtatataaagtaaacacttcccataATC-GTCTCTTT---CTTTTGT-AAAT-TGACGC-ATAACACAC-C-CGAT-GC--TTTTTCT-AACC--CGAT-CG-AC-T-AAATGACACTG-AATATCTT-CAAAA-C-T-AA-T-GAT-AAAAGTT-CTGTCCAAACGGT--ATTATGA-T-ATAT-T-GTATTGTATTTTT--CCT-ATTTGCATTTTCCTGATT--AAA-------AATTTATA--AATTTGTTCAAATTGTATT------TAG--AA-TT--GAAA-TTAGCTAAAGAAATAAT-TATGTT
gi|18 : ttTATAT-GTATT--------------------------TA---AGC-T--------------TGCATTTTTCCAG--T-TTGCG-AAGTTTAAAT---T----AGGAG--TAAA-TAGAT-TG-ATC-G--------------------AACTGTTGTCTTGT-GA--GCTAAACT--GCT-----AG---------------AAATAACTGCTTATACTGAA-TTCTTAGCAGCTTACAATTAGTAG-T-AAAACCCACAA-CTGTTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AA----CTC--TT---AAC-TG-CTAAAG-A---T--A-----A--GC-AG-TA---CT----------------GTT-TA-TT-TTGCCTTGGtgaaaattttc
gi|19 : agat----T-----A------TA--TGGTGTCTTGT-AA--AGTGGACT--GCT-----AG-TGAAAC-TGCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-GAAA-CCACAA-CTGCTTGAA-T-CTG--TTTAAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-TCAAAG-AA-CT--GCC--TA--TC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGGgta
gi|2 : CATGTCAAAGTGGAAGGCACGTTTGGTTGCAGTTATTAAGCCTTCCCAGTT-TTACTTT-CTTAGGCAGTT--TTATAGCAGTTCTATAACCTTCCCTTAGCCTT-CTTTTCTATTCTTGCAAAAGTAATAATA-TTACTCATGAAAATCAAG-CA-GTTCAATGGCA-GTTTTTC-TTA-GCCTTACCAAG--TTCG-TAAGC-----A-GTACTTA-GAGCAG-TTATTTTC--AGCGGAAAAAT-GTA-AATGAGAT-GAGGA--AAACTGGC-TAGCC-GACTGCTTAGGAA-CTGCTA-GTCCGATGTTCGCATATA--TGGTAGTG-TCTAATGAATATTCAAGGCAATACAATGAGGCTCTAAACTTG-AG-CAAATCTGCCTAGCAA----GGATTTACAATTTTTCAAACATTAAAACCCCTATTAAAATCA--GTGTTCAA--AAT-CTATGG-AATAAGCAAT--ACACTATTCAA---CAATAGGAAAGTTT-ATAATGGGGGGAAAAAT----AATAAAAAAACAATGCAGAAAAA-ATAAAATTGGTAAATT-AATTATTTA--TC-A-CATTTGTTGTTTTCATTTCAGAAC-ACATAAATCTA--CA-TTTTTTCGCCATAT--CAATATGGAAAAGAGAGAAAA--CTAAATGGAATTGTTGACTAAATTATA-TGAAACAAAA-TTTAATTTAAT-TTCGAGA-TTGTAA-TATAT---GTAATA----GATCTACATCC-CAGTTGAACTTCCAGAG----TAATTC-AACACTCAGT-AAACG-ATTTCA-AAATTCCA-AC-AC--TG-AAATTGATGGAAAC-CT--AGACAA-CTGC---AGAAATTCTAT-CGGA-T----ATCAAA--AG-CTGT-----TGTATAT-ATT-A-TTC-ACTGGT--T-C-AATA--AATATATT-----TCCAATATT--C-AGCAAACAAGCAGTTA-AATCCCCAAAT------A--ATCC-ACAT----AC-----AGTTGCTGTCC-ATT--TTT-TATTTGCA-ATTCACAAACT---AGTGC-CTGC----------GTT-CATAA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT---CTAAGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGATTA-TTTAAA-AACTGTATTGCGCTTTGCTAGT-CCT-TCAT----TGAAAT-CACAGCA-GTTTGATAA-ACAG-CCTCATTT-TGGATAGATCTGCAAATGACT-CCGTG-AAGGAAAAGAAGCCTTT-GGCAACACTGCTG------GACAACAA-AATGAAGAATAAT-ACA--A-AATTATGGTA-TAGTTAATA---ACAA-AGCTAGACCCCTCACGGCCAATAGGCATT---GGCAGTAGGTGC-A-AAATGCAACATTT--TGGGGGTCCACATATAAATTTACGACAT-CGGAGTGCGGTCATAT-----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAAGTT--AA-AAATCAA-ATC--AAAA--ATAA--TTGAG----------T---ACTATT-A--TAAGATCCCAACTCTAC-----ATTTTACAATTCCA-TTTC-AAACTGGACTCGGT-GTAGGA--GCCGGCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-CTTGGCAC--AGAAAT-CATAAATCT-CAAAAA--TATTCGTCGAGGCTTGATCT-AT-NNNNNNNNNN-N----NNNNN-NNNNNNNNN-NNNNNNNNNNNN-N-NNNNNNN-NN-NNNN-NNNGAAG-A---AA---GGGGAA--CA-------GTCCAA-----AC-AAATC-TCGCTGTGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACAC-GTAAAA--ATAAC--TGTACTCATATAAA-AC---TTCTGGATATCC-TCTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCATGTT-TTAACA-GCAATCAA-AGG-C-GCAAGTCCTG-AAT-CT-GT-TAC-AAACGCGCGCG-------CATTC-TCTGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-C-AAATGTGACGC-ATAACACA--C-CGATTGC--TTTTTTTGA--C--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TACAGTTTCTG-TCCAACGGTTAATTATGA-TCATAT-TGGTATTG-A-ATTT--CCT-ATTTGCATTT--CTGA--TGAAA-------GAATTATT--AA-----TCAAGTTG-ATT------TAGATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GT-----TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-TAC--------TATAT--AATATA-AT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCAAG--TGTTGCAGAAAGTTAGATAT-T----AGGAGACTAAA-TGGATCTG-AACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAATCT--GCT-----AG-TG-AAC-TGCTAAGAATTAACTGCTTAT-CTGAATTTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAAGCTGCTTGGA-A-CTG--TTAGAATA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-C---GCCTTTA--GC-AACTG---CTAAA--ATAGAGC--A-GTT-CA-TTCTTTCCTTGGga
gi|20 : AT-TG-AACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----AG-TGAAAC-TGCGAAGAAATAACTGCTTATACTATA-TTCTTAGCAGTTTACATGTAGTAG-T-AAAA-CCACAA-CTGCTTGAA-A-CTG--TT---------------TAAA--------------------AAC-TG-CCACAG-AA-CT--GCC--TATAGA-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTAG
gi|21 : taaA-CCCTATCAAAATCAT-GTGT--AAATAAT-CTATGGAA-TAAGCAAT--ACACTGCTCAA---CAATAGGAGAGTT-----AT---AG------A----AAGAAACAAACAAC--AAGAAAACA-AAAATT-GTTAATT-AATTTTTTA--TC-A-CATTC-TTATTT-CATTTAAGAAC-ACA-AACTTTA--CATTTTTTTCgt
gi|23 : gctaatatacaatttcTACTGAA-TTCTTAGCAGT---CAAGTAGTAG-T-AAAA-C-ACAA-CTGCTTGGA-A-CTG--TTAGAAAA-----CTGCCAAATA--AT----CTC--AT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|24 : --TAAACTTTAC-----AAATATG-TATGTTAA-TTC--ATATTTATAC-----TT-T--AT-TACAGTAACGGTAAAT---CAAAATAA---------AAAATA-----------AAAATC-T-TATA-CAT--GTAGTTACTAAATTTT-A-AAA-T-A--AA-ATTTCA-TAC--------g
gi|25 : T--TA----AAACAACA-GAG--GATG-AATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATTAA-A-C--AAAA--GTAA--TT-AT----------TATAA----T-A--TAAGATCCCAACTCTAC-----ATT
gi|26 : A--GACTGTCAT-TT-T--ACA-GCAATCAA-AAG-CAACAA-AACAA-AA---T-G--CA--AAACGCGCGCCATAAAAGCAGG-----GCAC-AG-AGTT-ATCGGTC-CTTTCTCTTATT-T-
gi|27 : TACCAGTTTACCC-TAGTAG-T-AAAA-CCACAG-CTGCTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AT----CCC--TT---AAC-TG-CCAAA
gi|28 : AGATAT-TT---AATACATTAAAATAAAT-TG-AACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----AG-TGAAAC-TG
gi|29 : ATGCGAT--CTCACAGAA-TTAAAGACA-TT--AA-A-------------------TAA--TTGAG----------C---A----TTG--TAAGATCCCAACTCTAC-----ATT
gi|3 : TCCAG-GAA--TTATTCAAAC--TCATT-AAATG-ATT----AA-TTCCATACGAC--TGAAGATTACTGGAAAC-CCTCAGATAAACTGCCCCAGAATCTCT-T-CGAAAT--A-A----A--AG-CTGTGTA---GTATATGATCCA-TATAACTTGTCATCT-TATAGAATTACAGTCATAATCCAAGA---AC-AAC-GTTCAG-ATTTT-AGTCCAAACATA-----ATAATCCA-CAC----ACTTGTCAGTT-CCGTCCTATT--TTT-TATGCATA-GTTCA-GAACTCTGAGTGCGC--C----------GATACA-AA-GTCGTGAAATCA--CATTT--GT--CGCAGTCTCTTCAT-AATTCTGATGTCACGTCGACCCGCAA-TGCGCAAGGTAAGGA-TAAT---AA-GACTA--ATGTGC------AAT-TCT-TCAT----T----T-CACA--AAG-TTGATAA-ACAT-CC-CATTT-TGC-TA-ATCTAC--ATGACT-CCACG-AA-GAAAAG-AGC---T-GGCAACACTC-TGAAAAA-GA-AATAAGAATTGAAAATAAT-ACA--------ATGATATTAATTTATA---ACAA-AGCT--------TATAA-CAAT----ATTATGGGC--TA--TG------ATGCAACATTTGTCGGGGGTCCAAATAT---TTTA--ACATACGGAGT--GTTTATATATAGTCAT--TA----AAACAACA-GAGGAGATG-AATGCGA--TCTCACAGAATTTCAATACA-AT--AATAAATCCA-A-CCAAGAA--ATAA--TTGAG----------T---A------A---GAGGTCCCAACTCTAC-----ATTTTAC--TTCCA-TTGCAAAAATGGACTCGGT-GTAGGA----C-GCG--CCGCACCGAGGGCCTTTCGTCCCGGGGTCCTCGTT-CT--GCAC--AAAAAT-CA-TAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACAGAGTCCTAGTAATGAGAAACATT-A-GCTTCGA-CG--ATC-TCGGAAGAA---AA-TCAAGAAG---G----------CGA-----CCATGGCCGTCGCTGAGATTAATAAAAAAT--ATCCAGTCTCATGGCA---ACGGT-TAA--AT---------CTAGGAT-AA-AC---ATCTG
gi|3 : cgACAGT-AAA--ATGAC--TGTA---AAAT-TA-ACTTTATCT---TATTCGCCTATCG-AACAGCCAAG--CTTACTAGTCTAGGATCCAA---TTGCTTTGATC-CACT-A--GACTGTCAT-TTCT--ACA-GCAATCAA-AGGCC-GCAATTCCTGTAATGCT-GTCCAATAAACGCGCGAC-------CATGCAT-TGCAC-AGTGGTT-ATC-G----------GTATT-G-A------ACGC-AGAAAGCAC-CTCGA-TGC--GTTTTTT-AACC--AGAT-CG-ACGTAAAATGACAC-G-AATATCTTT-AAAA-C-T-AATTTGA--TATAG-TTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTTTGTCTAA-TTGCACTT---TGG--TGAAACTGTTGTAAATTATATCAA-----T-AAGTTG-ATT------TAAATAA-TTTATAAACTTTGC-----AAATATT-GATGTTAATT-C--ATAA--ATAC-----TTGG--CTATA--GTAAAT-TAAAT---TAAAA-AA---------AAAA-A-----------AAAATCGT-TATA-TATCAGTAGTTACAAAA--TG-G-AAA-T-ACCAATATTTCACCACCAA-----TATAT--TTTAtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|3 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaGCTTGGATA-CTGG-TTAGAAAAGAAAACTGCCCAATATTATAGTCCTC--TT---AAC-TG-TCTATA-GA-CA--GG---TA-----AACTGGCTCTAAG--ATA-AGCTCATGTT-CA-TT-TGTCCTTGGgggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataaAGAAGCTTGTTCCAACACTCA-T-AA-TG-ATT----AA-TTCCA-AC-ACATTGAAA-TTGATG--AACACC--AGATAATCTGC---AGAAATTCT-TTCGAA-TT-A-AT--AA--AG-CTGTAGTTAT-TATAT--TC-AGTTCA-CTTGT--TC--AATA--ATTACAGG-----T---ATATT-CCCAAC-AACCGTTAGGTT-TATCCA--AATA-----A--ATC--ACAT----TC-----GGTT-CCGTCC-ATT--CTT-T--TTGCAAGTTC-CAAACT---AGTGC----------------AT-CA-AAAGT--TGAAA-CATACATTT--GTTCCGCAG---CTTCATTA-TTCTGATT-CAC-TCGGCCCGAAAGAGT-TAA----AGGA--A-T---AAGAACTATGGTGCA-------AGTTCCTCTCAT----T----TTCACA--A-G-TTGATAACACATGCC-CATTTATGGATA-ATCTAC--ATGACTTCCACGTAA-GAAAAG-AGCC-CTAGGCCAAACTCTTGAAAAAAGA-AATAA-AATTGAAAATAATCACA--T-GGTTATAAT--TAATTTATA---ACAA--GTTATA---------AACAAT----ATTAATGGT-ATG-GTGC-AGAAATGCAACATTTT---GGGGTCCATAAAT--ATTTT--ACAT-CGGAGT--GGTTATATA----TATCTTA----AAACAACA-GAG--GATGGAATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATCAACA-C--AAAA---TAACCTTGAG----------T---A----------AGGATCC--ACACTACTAACAATTTTAC-AT--CAGTTTC-AAA-TGGA-TCG-T-GT-GGA--GCC-G-GTTCCG-C-CGAGGGCCATTCGTCC--GGGTCCTCGTCATTA-GCAC--AAAAAT-CATTAATCT-CAAAAAAATATTCGTCGAGGCTTGATAATATACTT-GAAGAC-GTGTCCGACA-AGTCCA-GT-A--ATGAATAT--A-GCTTCGA-CG-AAT--TCGGAAG-A---AC-TCAGAAGG--CGACATCGCGTCAAA-----ACAA--TT-TCG-TGAGAT----------------CAGTCT-ATGAA-TACACAGT-AAA--AT-AC--T-TACTTA-------AC---ATCTGGATATCC-TCTATAG-AA-AGC--AGACCT-AC--ATATAG-ATC-AAATATT-CTT-G-TCGCACTGGATGACTGTCAT-TT-T--ACA-GCAATTCA-AAG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------AATGC-TATGCAC-AG-AGTTA--T-GTC-TTTT---TAATT-T-GAAT-TGACGCAATAACACACGC-CG--TGCTTTTTTTTTAAACCCGCGATCCGCAC-T-AAATGACAA-G-AATATCTTTCAAAA-CTT-AA-TTGAA-TATG--TTCTG-TCCAACGGT--ATTATGA-T-ATAC-T-GTATTG-A-TTTG--CCT-A-ATTCATTT--CTGGTTTTGAA-------AAATTAT---AA-----TCAAGTTG-ATTTTTTTATAAATAATTT--TAAAC-TTGC------AATATG-TATGTTAATT-C--ATAA--ATAC-----TT-----T-TA--GTAA-------------------------------------------------------ATA-CAT--GTAG-TACAAAATTTTCACAAA-T-A--AA-ATTTCA-CAA--------TATAT--TGTAgttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : aGCTTGGA-A--TG--TTAGAAAA----ACTGC-AAATA--AT----CTC--CTTTAAACGTG-CCAAAG-AA------------------ACTG---CTAAA--ATA-AGC--A-GTTACA-TT-TTTCCTTGGagcttggaatgttagaaaaactgcaaataatctcctttaaacgtgccaaagaaactgctaaaataagcagttacatttttccttgggttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : aagaagcttgttccaacactcataatgattaattccaacacattgaaattgatgaacaccagataatctgcagaaattctttcgaattaataaagctgtagttattatattcagttcacttgttcaataattacaggtatattcccaacaaccgttaggtttatccaaataaatcacattcggttccgtccattctttttgcaagttccaaactagtgcatcaaaagttgaaacatacatttgttccgcagcttcattattctgattcactcggcccgaaagagttaaaggaataagaactatggtgcaagttcctctcattttcacaagttgataacacatgcccatttatggataatctacatgacttccacgtaagaaaagagccctaggccaaactcttgaaaaaagaaataaaattgaaaataatcacatggttataattaatttataacaagttataaacaatattaatggtatggtgcagaaatgcaacattttggggtccataaatattttacatcggagtggttatatatatcttaaaacaacagaggatggaatgcgatatctcacagaattaaataaattaaaaatcaacacaaaataaccttgagtaaggatccacactactaacaattttacatcagtttcaaatggatcgtgtggagccggttccgccgagggccattcgtccgggtcctcgtcattagcacaaaaatcattaatctcaaaaaaatattcgtcgaggcttgataatatacttgaagacgtgtccgacaagtccagtaatgaatatagcttcgacgaattcggaagaactcagaaggcgacatcgcgtcaaaacaatttcgtgagatcagtctatgaatacacagtaaaatacttacttaacatctggatatcctctatagaaagcagacctacatatagatcaaatattcttgtcgcactggatgactgtcattttacagcaattcaaagcgcaatcctgaatctgtcaaaacgcgcgccaatgctatgcacagagttatgtctttttaatttgaattgacgcaataacacacgccgtgctttttttttaaacccgcgatccgcactaaatgacaagaatatctttcaaaacttaattgaatatgttctgtccaacggtattatgatatactgtattgatttgcctaattcatttctggttttgaaaaattataatcaagttgatttttttataaataattttaaacttgcaatatgtatgttaattcataaatacttttagtaaatacatgtagtacaaaattttcacaaataaaatttcacaatatattgtaaT--TA----AAACAA-A-GAG--GATG-A-TGCGAT-CCTCGCAGAA-TTAAATAAA-TTTAAA-AAATCAA-AAC--AAAA--ATAA--TTGAG----------T---A------A---AAGATCCAAATCGTAC-----ATTTTAC-ATTCCA-TTTC-AAAA-GGACTTGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCCCTTCGTCCC-GGGTCC-CGTC-TT--GCACCAAAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATAATTCGAAGACGG----CGACA-AGTCCAAGT-ATG--AAATATTAA-GCTTCGAGCGAAATCTTCGGAAG-A---AACTCAAGAAG---G-------CCCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATCAAT-CAGTCT-ATGAAATACGCAGT-AAA--AT-AC--T-TACTCATAT--A-AC---ATCTGGATATCC-TCTATAGAAACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-C-TTG-T--CACTGA--GACTGTCAT-TT-T--ACAGGCAATCAATAGG-C-GCAA-TCCTG-AAT-CT-GT-C---AAACG-GCGTC-------CATGC-T-TGCACAAG-AGTT-ATCGGTC-CTTT---TTA---T-GAAT-TGACGC-ATAACACAC-C-CGAATGC--TTTTTTTGAA-C--CGAT-C---C-T-AAATGACAC-G-AATATCTTTC-AAA-C-TAAA-TTGA--TATAG-TTCTGTTCCAACGGT--ATTATGA-T-ATATATGGTATTG-A-TTTT--GCT-A-TTGCATTT--CTGGGTTG----------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGCA----AAATATGTTATGTAAT-T-C--AT----ATAC-----TT-T--CT-TA--GTAAAT-CAAAA---AAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-AAT--GTAGTTACAAAATTT----AAA-TAA--AA-ATTTCA-CAA--------TATAT--gttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : gGCTTGGA-AACTG--TTAGAAA------CTGCCAAATA--AT----CTC--TT---AAC-T--CCAAAGAAA-CT--GCC--T-----------------AA--ATA-AGC--A-GTT-CA--T-TTTCCTTGGgtaaggcttggaaactgttagaaactgccaaataatctcttaactccaaagaaactgcctaaataagcagttcattttccttggtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|6 : gttaaaacaaagaggatgatgcgatcctcgcagaattaaataaatttaaaaaatcaaaacaaaaataattgagtaaaagatccaaatcgtacattttacattccatttcaaaaggacttggtgtaggagccgcgccgacgagggcccttcgtcccgggtcccgtcttgcaccaaaaaatcattaatctcaaaaatattcgtcgaggcttgatctaataattcgaagacggcgacaagtccaagtatgaaatattaagcttcgagcgaaatcttcggaagaaactcaagaaggccccaaacaaaatctcgctgagattaaaaaatcaatcagtctatgaaatacgcagtaaaatacttactcatataacatctggatatcctctatagaaacagcagctacatatagatcaattcttgtcactgagactgtcattttacaggcaatcaataggcgcaatcctgaatctgtcaaacggcgtccatgcttgcacaagagttatcggtcctttttatgaattgacgcataacacacccgaatgctttttttgaaccgatcctaaatgacacgaatatctttcaaactaaattgatatagttctgttccaacggtattatgatatatatggtattgattttgctattgcatttctgggttgaaattataaatcaagttgatttaaataatttaaactttgcaaaatatgttatgtaattcatatactttcttagtaaatcaaaaaaaaaaaaaaaaaaaatcttataaatgtagttacaaaatttaaataaaaatttcacaatatatgtaagTAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT-AC-AAC-GATA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|7 : TAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT-AC-AAC-GATA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtctctacacagacacgacgatcaaagt
gi|8 : TGCACTTGTCCAG--T-TTGCA-AA-GTTAGATAT-TTATTAGGA--CTAAA-TGAAT-TG-AACTGCT----T-----T------TAAAAAATATA--AT-AACTGATAGACTCAGCTTAATAAG-TGAAAC-TGCTAAGAATTAACTGCTTATAATGAA-TTCTTAGCAATTTACAAGTAGTAG-TAAAAA-CCACAA-CTGCTTGAA-A-CTGTTTTAGAAAA----ACTGCCGAAGA--ATAA--CTCAATT---AAC-TC-CCAAAG-AA-CTTGGCC--TA--GC-AACTG---CTAAATGATA-A-C--A-GTT-CATTT-TTTCCTTGGtctctacacagacacgacgatcaaagt
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): AGCATTCATTTTTCGCTTCCGGTAACCCTGTAACAGAAAGTCCAAGCTTTTTGTTGCACATATACTTTTTAAATCACTATAGTTCCCTGAAAACAATATAGATGTCCTGCATTGTCTTAAATATATCATGTGTGAGACTTTAGGGAAATTTGAGGGACCTTATAACTTTTTATTTTCAATTCAGTTAAGTCCTGAAAACAAAAGAAAGTCCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTGCAGGACAAATTTGAGTCTACACAGTTTCTACAAAGTCACAACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTTCTGAATTTCCTTGCATTAGGACAGGAGAGATTAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATATGCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Unaligned ( gi|11 ): GTGCAAGACTTTTTGTTGCACATACTTTTATCAACAAGTCCTGAAAAGCAATGTAATATGTCCTACATTTTCCTGAATATATCATGTGTGAGACTTTTAGGAAATTTGAGGGACTTATAACTTTTTTTTAATTTCATCAGTAAGGTTCTGAAAACCAAAAGAAAAGTCCTGTAAAGACCTCTGCAGTGAGTAAGTGGGCCATTGTGCGAGGACATTTGAGTAATGTATTTGTCCTACAAGTTCCTAAAGTCACACTATGTTATGGGTATATTAAAGGATCAACTGCACAGGAATAAGAAGTCCTGAACTTATCCCAACTGCTAGGAGAGAGAAGTGGACTGGAAAAAGGAAGTCTGGGACTTCCAGGGATATTTCAAATTTCAACGAAGTGGGATTTATTTTTGGAGG
Unaligned ( gi|12 ): AATAAACGCATTCATTTTTCCTTGGGTAACCCTGTACAGAAAGTCCAAGACTTTTTGTTGCATCATATACTTTTTAATCACAAGTCCTGAAAAGCAATATAATGTCCTGCATTGTCTTAAATATATCATGTTGTGAGACTTTTAGGAATTTGAGGGACTTATAACTTTTTATTTCAATTCAGTAAGTCTCTGAAAACAAAAGAAAGTCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTTGCAGGACATTTGAGTCTACAAGTTCTACAAAGTCACACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTCATGAATTTCCTATGCATTAGGACAGGAGAGAAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATA
Unaligned ( gi|13 ): GCTTTTAGGACACCTCTGTACAGAAAGTCCAAGACTTTTTGTTGCACATGCTTTTATCAACAAGTCCTGAAAAGCGATGATAATGTCCTGCATTGTCCTGAATATATTCAGCTGTGAGGAACTTTTTAGGAAATTTGAGGACTTTTATTTCATCAGTAAGTCCTGAAAAACAAAAGAAAGTCCTGTAAAACCATCTGCTGTTGTAGTGGGAATTTGCAGGATATTTTGAGTAATTGTATTTTGTCCTACAAGTTGATATTCAAGGGCAAATTGCAGGAATAAGAGCCTGAATTATCCCACTGCTTAGACAGAGAGATAGTGGGACGGAAAAGGAAGTCTTCAGGATTCCAGGGATTATCCTTAAAATATTCAAGAAAGTGGGATAATTTTTTGGCAGGGA
Unaligned ( gi|22 ): ATGTTACTGGGATATTTAAGGAGAATGGCAGAATAAGAAGTCTGAATTATCCACTGCATTAGGACAAGAGACTCAGTGGACTAGGATAAAGGGAAGTTCAGACTTCCAGGGATGATTCCTTCAAATATCAGAAAGTGGGATTTATTTTTGGAGGG
Unaligned ( gi|30 ): GGGATATCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111
lowQualScore : 1 444444444444444444 111 1 1111 11111 1 2 11 1 2 2222222 22 11111 11 22 1 1 1 1 2222 11 11 1 1 111 1 2222 11 222 11 1 11 222 111 1111 1 11 1 1 11 1 11 11 111 11 1 11 1 1 22 1 1 11 1 11 111111 11 2222 1 111 3333 2222222 222222 2222222 22222222 11 11 11111111 11 33333333333 11 1 11 111 777777777777777 1 1 1 11 1 11 11 11 111 222 1 1 1 1 3333 22222222 1 4444444 1 1 44444444444 1111 1 1 11 1 1 1 11 11 1 1 1 22222 22222 1 1 333333 11 111 11 777777777777777777777777777777777 11 1111 222 222 1111 1 11 33333 1111 111 111111 111 6666666666666666666666666 11111 11 11 11 111 2 11 11 11 11 111111 222222 1111 11 11 1111111 444444444444 22222 1111 11 2222222 1111 111 11 11 11 111 1 11111 22222222 111 22 1 111 1 11 11 1 1 1 44444444444444 111 11111 111111 11111 111 11111 1111 11 555555555555555555555555555555555555555555555 33333333 1 1111111111111111111111111111111111111111111111111 11 11 2222 22222222222222222 11111 1111 11111
lowQualScore : 6 3 7 999999999999999999 7 77 0 8 000 1 8 0 2222 99999 11 3 0 99 8 0 0 8 0 66 11 1111111 8 8 8 11 8 22222 88 11 66 44 0 0 0 0 0000 2 22 33 66 3 0 3 0 3 5 666 0 1111 1 33 444 0 33 44 0 8 6 6 0 11 111 66 0 444 1 7777 55 3 77 8 0 0 11 0 8 8 99 0 0 11 0 5 11 0 1 33 777 33 0 33 1 0 0 9 33 0 1 0 999 2 9 33 0 11 222222 1 3 3 2 44 0 6 5555 7 6 6 99 44 99 6 99 1 000 1 5 5 5 1111 888 77 5 9999999 5 55 5 5 5 000000 99 6666666 99 6 88888888 88 00 66666666 00 55555555555 6 6 88 3 22 77 33 777 000000000000000 1 0 0 0 33 0 33 33 33 2 777 333 99 5 0 0 0 0 1111 22222222 0 555 9999999 0 0 66666666666 4444 0 3 0 00 0 0 3 0 33 33 44 0 0 0 66666 7 7 22222 0 3 0 555555 33 7 777 33 333333333333333333333333333333333 22 9999 2 999 3 1 000 4444 2 0 33 66666 99 4444 6 99 6 5 333 5 5 77 5 333333 111 77 1111111111111111111111111 0 44444 88 0 8 8 66 8 0 11 8 11 111 4 33 0 8 99 11 8 0 8 11 6 0 7 2 777777 8 2 111111 1111 8 00 88 8 9999999 888888888888 00000 0 3 8 4444 33 8 8 11 1 6 99 6666666 1 7 5555 111 8 1 8 11 11 8 11 8 8 444 8 0 0 8 8 99 6 6 99 6 6 6 6 3 6 6 6 77777 44444444 555 6 6 00 1 5 000 888 3 6 77 6 44 99 9 2 99 6 6 6 6 6 6 6 6 6 6 88 1 1 7 99 6 6 6 3 6 6 99 6 3 99 00000000000000 222 66666 5 666666 5 5 66 0 77777 5 333 77 1 77 44444 5555 5 55 666666666666666666666666666666666666666666666 555 5 77 9999 5 5 77 5 5 00000000 99 3 0 8888888888888888888888888888888888888888888888888 11 8 11 3 6 0000 777 5 1 5 5 33333333333333333 4 66 1 66 55555 4 8 5 4 4 4 4 4 3 3 77 4 1 6666 44 0000 44 555 3 3 3 44444 77 00000 555 77 3 44 3 3 3 3
lowQualScore : . . . .................. . .. . . ... . . . .... ..... .. . . .. . . . . . .. .. ....... . . . .. . ..... .. .. .. .. . . . . .... . .. .. .. . . . . . . ... . .... . .. ... . .. .. . . . . . .. ... .. . ... . .... .. . .. . . . .. . . . .. . . .. . . .. . . .. ... .. . .. . . . . .. . . . ... . . .. . .. ...... . . . . .. . . .... . . . .. .. .. . .. . ... . . . . .... ... .. . ....... . .. . . . ...... .. ....... .. . ........ .. .. ........ .. ........... . . .. . .. .. .. ... ............... . . . . .. . .. .. .. . ... ... .. . . . . . .... ........ . ... ....... . . ........... .... . . . .. . . . . .. .. .. . . . ..... . . ..... . . . ...... .. . ... .. ................................. .. .... . ... . . ... .... . . .. ..... .. .... . .. . . ... . . .. . ...... ... .. ......................... . ..... .. . . . .. . . .. . .. ... . .. . . .. .. . . . .. . . . . ...... . . ...... .... . .. .. . ....... ............ ..... . . . .... .. . . .. . . .. ....... . . .... ... . . . .. .. . .. . . ... . . . . . .. . . .. . . . . . . . . ..... ........ ... . . .. . . ... ... . . .. . .. .. . . .. . . . . . . . . . . .. . . . .. . . . . . . .. . . .. .............. ... ..... . ...... . . .. . ..... . ... .. . .. ..... .... . .. ............................................. ... . .. .... . . .. . . ........ .. . . ................................................. .. . .. . . .... ... . . . . ................. . .. . .. ..... . . . . . . . . . . .. . . .... .. .... .. ... . . . ..... .. ..... ... .. . .. . . . .
lowQualScore : 7 3 3 000000000000000000 3 44 8 0 222 4 0 6 6666 88888 88 6 4 66 0 6 0 0 8 44 66 6666666 0 0 0 00 0 22222 66 00 44 00 0 0 0 0 8888 0 55 88 55 2 0 2 2 2 5 222 0 2222 0 22 111 8 00 66 6 0 0 0 8 00 666 44 8 000 0 0000 66 8 22 0 6 8 00 6 0 0 00 6 6 44 8 4 00 8 0 88 555 88 0 88 0 0 0 8 88 0 0 0 000 5 2 22 0 22 888888 0 2 2 5 00 7 7 8888 3 7 7 22 88 22 7 22 4 000 7 7 7 7 3333 000 99 7 6666666 0 99 7 7 0 999999 22 8888888 88 7 33333333 33 33 88888888 55 77777777777 7 7 33 3 77 77 00 555 222222222222222 0 0 0 0 88 0 88 88 88 5 555 222 88 5 0 2 0 0 2222 88888888 0 000 0000000 0 0 88888888888 8888 0 2 0 88 0 0 2 0 88 22 55 0 0 0 22222 0 0 55555 0 2 0 000000 22 0 555 22 555555555555555555555555555555555 55 5555 5 222 2 0 888 5555 5 0 88 88888 22 2222 7 22 7 0 333 7 7 99 7 000000 444 99 9999999999999999999999999 7 33333 88 8 0 0 22 0 8 00 0 00 888 0 00 8 0 00 00 0 8 0 00 0 8 2 2 222222 0 8 222222 8888 0 88 22 0 4444444 444444444444 00000 8 8 0 8888 00 0 0 66 7 7 22 8888888 0 5 8888 777 0 4 0 00 00 0 00 0 0 000 0 8 8 0 0 22 7 7 22 7 7 7 7 3 7 7 7 00000 22222222 000 7 7 55 4 7 000 000 3 7 77 7 88 22 3 5 22 7 7 7 7 7 7 7 7 7 7 33 3 7 3 22 7 7 7 3 7 7 22 7 3 22 00000000000000 777 77777 7 444444 0 7 99 4 55555 0 999 99 7 99 33333 0000 7 77 444444444444444444444444444444444444444444444 999 7 99 4444 7 7 99 7 7 77777777 22 2 0 8888888888888888888888888888888888888888888888888 00 0 88 8 7 8888 333 7 7 0 0 66666666666666666 4 11 0 11 66666 4 9 9 4 0 0 0 0 1 1 33 3 5 5555 22 8888 22 444 1 1 3 88888 99 88888 888 99 3 66 3 3 3 3
consensus : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A-AT--AA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT-AC-AAC-GACAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-C--C----------GNT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACA-AGTCCAAGT-ATGATAAATATT-A-GCTTCGA-CG-AATC-TCGGAAG-A---AA-TCGGGAAG--CG-------GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATAT-AA-AC---ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-CAC--------TATAT--TATATATAT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
Reference ( family-657 ) : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A-AT--AA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT-AC-AAC-GACAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-C--C----------GNT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACA-AGTCCAAGT-ATGATAAATATT-A-GCTTCGA-CG-AATC-TCGGAAG-A---AA-TCGGGAAG--CG-------GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATAT-AA-AC---ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-CAC--------TATAT--TATATATAT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|1 : AGTG--AGGCA-GTT--GTAGCAGTTATTAAGCCTTCCCAGTTGTTAC-TTGCCTAGGC-GTTTATTTTAGCCGTTCCTTA-CCTT-CCTTAGCCAATCTTTTCTATTCTGG---AAGTAATAA-AATTA--CATTTAAAATAAGCGA-ATACAGAGAGATATTTTTCTTTA-GCCTTACC-AGTT--CGT-AAGC-----A-GTAC-TGAGAGCAGCTTATTTTCA--GC-GAAAAATG---TAATGAGATTGAGGAA---ACT-GCT-AG-CAGACTGCTTAGGAATCTGCTAAGT----CATTC--ATATAATTGGTAGTGT-CTAATGAATATTCA-GGCAATACAATGAGGAT-TTA-CTAGTAG-CAA---TG-CTAGCAATAGGAGATTTACAATTCTTCACA--TTAAAA-CACTATTAAAA-CAGTGTGTTCCA-GAATACTATGGTATTA-GCAATTAACACTATTCAAAGTTTATA------TCTAATG-----GGGAAATAATAATAAAAAAAAAACAATCAAAGAAAATAT-AAATT-GTAAATTAA-TTATTTAGTTCAATCATTT-TTGTT--CATTTCAGAACA-CATAAATCTAATTATTTTTTTTCCCATATCAAAAATTGGAAAAGAG---AAAAACT-AATGAA--TGTTGACTAAATT-TAATGAAACAAAAATTTCATTTAGATTTCGTCTATTGTAAGTATATAT---AATACA-TGATA--CATCCACAT-TGAACTTCCAG------TTATTCAT---CTCAGTTAAACGCACTTTTAAAATTCCA-AC-AC--TGAA--TTGATGCAAAA-CC--AGACAA-CTGC---CGAAATTCT-T-CGGA-TCAATAT--AA--AG-CTGT-------TGTAT-ATT-A-TTCA-CTAGT--ATC-AATA--AATATTGA-----TCCAATATTCAC-AAC---CAAGCAGTTTTAATCCAC-AATATCCACA--ATCCA-C-T----AC-----AGTT-CCGTCA-TTT--TTT-TATT-GCA---TCAC-AACT---AGTGC-C--TATGTTTCTATGTT-TA-AA-GT--ATTAA-CA--CATTTATGT--C-CAG---CTTCAT-A-TT-AGATT-CAC-TCGGCCCGGAA-AGT-CAGC---AGGA-TA-T---AA-AACTATATTGTGCTTGC-TAGT-CCT-TCATGAAAT-------ACA--A-G-T-GATAA-ACAC-CT-CATTT-TGGATA-ATCTGC--ATGAT------G-AA-GAAAAG-AGTC--T-GGCAACATTCTTGGAAAC----AACAA-A--TGAAAATAAT-ACATTACAATTATGGTA-TA-TTTATATAAACAACAGCTAGATCCT-CACG-CCA-T----AT----GGCTATA-GTGCCA-AAATG--GCATTTG-TGGGGG-CCAAATAT--GTT-A--A-AT-CGGAGT--GGTTATAT-----CAT--TATTTAAAACAACAAGAG--GATG-A-TGGAAA-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAAGAATA---TTGAGAGTCTTAATGT---A----T-AAATAAGATCACACTTCTAC-----ATTTTAC-ATTCCA-TTTC-AAA-TGGACTCGGTAGTAGGAAAGCC-GCG--CCG-A-CGAGGGCC-TTCGTCCG-GAGTCCTCGTC-TT--GCAC--AAAAATTCATTAATCTTCAGAAA--TATTCGTCGAGG-TTGATCTAATACTTGGAA-AC-G----GCCCA-AGTCCAAAT-A--ATAAATATT-ATGCATCGA-TG-AATCATCGGAAG-ACTCAA---GGGAAGACCA-------GTCCAATATTAACAAAATC-TCTCTGAGAT---TGAAAAATC-AT-CAATCT-ATGAAATACACAGT-AAACAAT-ATCTT-TACTCATAT-AACAC---ATCTGGATATCC-TTTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-CA---TT-CTTTG-TC-CACTGA--AACTGTCAT-TT-T--ACA-GCAATCAA-AG--C-GCAA-TCCTG-AAT-CTTGT-TA--AAACGCACGCC--------ATCC-T-TGCAC-AG-AGTTA-TC-GTC-CTTT---TTATT-TTAAATATGACGC-ATAACACAT-C-CGAT-GC--TTTTTTTGAACC--CGAT-CG-AT-T-AAATGACAC-GCAATATCTTTCAAAAAC-T-AA-TTGATACATTGTTC---TTTCAACGGT--TATATGAAT-A-AT-T-GTATTG-A-TTTC--CCT-A-TTG-ATTT--CTGATT---GA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AA-TATG-TATGTTAA-TTC--ATAA--ATAC-----TT-T--CT-TATAGTAA---CGAGTATACAAAA-AAGAAAAAACAAAAA-AAAAAAAAAAAAAAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAATT-A--AA-ATTTCA-TACTGAAACTTTATATGATATATATAT-ATATTAATATATTATATTATATATAATATTGTA---AGCAAAGCTACATGTAGCTTGCACTTGTCCAG--T-TTGC--AAAGTTAGATATAT----AGAGGACCAAG-TGGAT-TGAAACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAAACT--GCTA----AG-TGAAACTTGCTAAGAATTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAATAGTAGTT-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGGAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-TACTG---CTAAAT-ATA-AGC--A-GTT-TA-TT-TTTCCTGGG
gi|10 : ttaaagtgtgagatatgatattgcgaacccattcCGAGTCG-ATT------TAA---------TAAACTT-GC-----AAATATA-TATGTTAA-T-CTCATTA--AAACCAAAGTA-TAACT-T---GTAA----GATT---CATAA-TC---------AAAT-AT----------AAAATC-TCTATAGCGT--TTAGTTACAAATTTTT-A-AA--T-A--AA--TTTTA-TAT--------GATAT--TATATATATTATATT-------------------------ATATAAAGC-TAGCT-------A-TTGCACTTGTCCAGTTT-TTGCA-AAAGTT-GA-AT-T----AGG-GACTAAA-T-GCT-TG-AACTGCTAGAATAATAAA------TAACTGGTATCTTGTAAA--GGTAGAT----CT-----AGTTGAAACTTGCTAAGAA-TAA--GCTTATACTGAA-TTCTTAGCAGTTTACAAGAAGTAG-T-AAAA-CCACAA-CTGTTTGGA-A-CTG--TTAG--AA----ACTGCCAAATA--AT----CTC--AT---AAC-TGCCCAAAG-CATTT--GCCT-TA--GCAAACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTa
gi|14 : AAA--GAAT-TG-AACTGCT----T-----ACATGTATAACTGGTATCTTGT-GA--GGTGTACT--GCT-----AG-TAAAAC-TGCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CAACAA-CTGCCTGGA-A-CTG--TTAG-TAA----ACTGCCTAATA--AT----CTC--TT---AAC-TG-CCTAAG-AA-CT--GCC--TA--TG-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|15 : ttattctaaataacttttctaactcgatcattcaataaaaaaaagtttagaattttttttttctttcattagactggaatttgcaaaaataaatgcaagctagttgtgagatctggctcttatgtgttaaaaatgctagccttatgataaccagttccactttgc-CTGC---ATAA---TT-T-CGAA-T--A-AC--AACCAGACTG-GCA-ATGTATGT-GTC-G-TTTAATTTTT--TCg
gi|16 : aagacaaaagaaaatcctCATGTCAAAGTGGAAGGCA-GTTTGCTAGCAGTTATTAAGCCTTCCCAGT-------------------TTTATTTTAG-AGTTCCCTAACCTT-CCATA-----------CTCTTCTGAC-AAATTGGTG------------GAAA--CAAG-CA-GTTCAA-AACA-GTTTTTC-TTA-GCTTTCCC-TGTTT---TTAACCAGTAGATCTAC-TG-GAGCAG-TTATTTTC--AAT-GAAAAAT-GTA-AATGAGAT-GAAGA--AAAC-TGCTgaatccaatattgatagtttcttcaccaagttcctacaaagtccatcatttaaatgttactgtgcgagtagtttttaaggacacattagtaagacgagggataagtataagtccctgaaaaataatctaatggagccactgctcagatctaggacagagagaagttatgaggatatgtagaaataaagtgggagtccagggacttccagagcgatatcctttcaaaatattcagaatgacgaagtacctacagttgtggatttagatttttg
gi|17 : ttaaggtgacaaaatatgtatataaagtaaacacttcccataATC-GTCTCTTT---CTTTTGT-AAAT-TGACGC-ATAACACAC-C-CGAT-GC--TTTTTCT-AACC--CGAT-CG-AC-T-AAATGACACTG-AATATCTT-CAAAA-C-T-AA-T-GAT-AAAAGTT-CTGTCCAAACGGT--ATTATGA-T-ATAT-T-GTATTGTATTTTT--CCT-ATTTGCATTTTCCTGATT--AAA-------AATTTATA--AATTTGTTCAAATTGTATT------TAG--AA-TT--GAAA-TTAGCTAAAGAAATAAT-TATGTT
gi|18 : ttTATAT-GTATT--------------------------TA---AGC-T--------------TGCATTTTTCCAG--T-TTGCG-AAGTTTAAAT---T----AGGAG--TAAA-TAGAT-TG-ATC-G--------------------AACTGTTGTCTTGT-GA--GCTAAACT--GCT-----AG---------------AAATAACTGCTTATACTGAA-TTCTTAGCAGCTTACAATTAGTAG-T-AAAACCCACAA-CTGTTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AA----CTC--TT---AAC-TG-CTAAAG-A---T--A-----A--GC-AG-TA---CT----------------GTT-TA-TT-TTGCCTTGGtgaaaattttc
gi|19 : agat----T-----A------TA--TGGTGTCTTGT-AA--AGTGGACT--GCT-----AG-TGAAAC-TGCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-GAAA-CCACAA-CTGCTTGAA-T-CTG--TTTAAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-TCAAAG-AA-CT--GCC--TA--TC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGGgta
gi|2 : CATGTCAAAGTGGAAGGCACGTTTGGTTGCAGTTATTAAGCCTTCCCAGTT-TTACTTT-CTTAGGCAGTT--TTATAGCAGTTCTATAACCTTCCCTTAGCCTT-CTTTTCTATTCTTGCAAAAGTAATAATA-TTACTCATGAAAATCAAG-CA-GTTCAATGGCA-GTTTTTC-TTA-GCCTTACCAAG--TTCG-TAAGC-----A-GTACTTA-GAGCAG-TTATTTTC--AGCGGAAAAAT-GTA-AATGAGAT-GAGGA--AAACTGGC-TAGCC-GACTGCTTAGGAA-CTGCTA-GTCCGATGTTCGCATATA--TGGTAGTG-TCTAATGAATATTCAAGGCAATACAATGAGGCTCTAAACTTG-AG-CAAATCTGCCTAGCAA----GGATTTACAATTTTTCAAACATTAAAACCCCTATTAAAATCA--GTGTTCAA--AAT-CTATGG-AATAAGCAAT--ACACTATTCAA---CAATAGGAAAGTTT-ATAATGGGGGGAAAAAT----AATAAAAAAACAATGCAGAAAAA-ATAAAATTGGTAAATT-AATTATTTA--TC-A-CATTTGTTGTTTTCATTTCAGAAC-ACATAAATCTA--CA-TTTTTTCGCCATAT--CAATATGGAAAAGAGAGAAAA--CTAAATGGAATTGTTGACTAAATTATA-TGAAACAAAA-TTTAATTTAAT-TTCGAGA-TTGTAA-TATAT---GTAATA----GATCTACATCC-CAGTTGAACTTCCAGAG----TAATTC-AACACTCAGT-AAACG-ATTTCA-AAATTCCA-AC-AC--TG-AAATTGATGGAAAC-CT--AGACAA-CTGC---AGAAATTCTAT-CGGA-T----ATCAAA--AG-CTGT-----TGTATAT-ATT-A-TTC-ACTGGT--T-C-AATA--AATATATT-----TCCAATATT--C-AGCAAACAAGCAGTTA-AATCCCCAAAT------A--ATCC-ACAT----AC-----AGTTGCTGTCC-ATT--TTT-TATTTGCA-ATTCACAAACT---AGTGC-CTGC----------GTT-CATAA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT---CTAAGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGATTA-TTTAAA-AACTGTATTGCGCTTTGCTAGT-CCT-TCAT----TGAAAT-CACAGCA-GTTTGATAA-ACAG-CCTCATTT-TGGATAGATCTGCAAATGACT-CCGTG-AAGGAAAAGAAGCCTTT-GGCAACACTGCTG------GACAACAA-AATGAAGAATAAT-ACA--A-AATTATGGTA-TAGTTAATA---ACAA-AGCTAGACCCCTCACGGCCAATAGGCATT---GGCAGTAGGTGC-A-AAATGCAACATTT--TGGGGGTCCACATATAAATTTACGACAT-CGGAGTGCGGTCATAT-----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAAGTT--AA-AAATCAA-ATC--AAAA--ATAA--TTGAG----------T---ACTATT-A--TAAGATCCCAACTCTAC-----ATTTTACAATTCCA-TTTC-AAACTGGACTCGGT-GTAGGA--GCCGGCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-CTTGGCAC--AGAAAT-CATAAATCT-CAAAAA--TATTCGTCGAGGCTTGATCT-AT-NNNNNNNNNN-N----NNNNN-NNNNNNNNN-NNNNNNNNNNNN-N-NNNNNNN-NN-NNNN-NNNGAAG-A---AA---GGGGAA--CA-------GTCCAA-----AC-AAATC-TCGCTGTGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACAC-GTAAAA--ATAAC--TGTACTCATATAAA-AC---TTCTGGATATCC-TCTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCATGTT-TTAACA-GCAATCAA-AGG-C-GCAAGTCCTG-AAT-CT-GT-TAC-AAACGCGCGCG-------CATTC-TCTGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-C-AAATGTGACGC-ATAACACA--C-CGATTGC--TTTTTTTGA--C--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TACAGTTTCTG-TCCAACGGTTAATTATGA-TCATAT-TGGTATTG-A-ATTT--CCT-ATTTGCATTT--CTGA--TGAAA-------GAATTATT--AA-----TCAAGTTG-ATT------TAGATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GT-----TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-TAC--------TATAT--AATATA-AT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCAAG--TGTTGCAGAAAGTTAGATAT-T----AGGAGACTAAA-TGGATCTG-AACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAATCT--GCT-----AG-TG-AAC-TGCTAAGAATTAACTGCTTAT-CTGAATTTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAAGCTGCTTGGA-A-CTG--TTAGAATA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-C---GCCTTTA--GC-AACTG---CTAAA--ATAGAGC--A-GTT-CA-TTCTTTCCTTGGga
gi|20 : AT-TG-AACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----AG-TGAAAC-TGCGAAGAAATAACTGCTTATACTATA-TTCTTAGCAGTTTACATGTAGTAG-T-AAAA-CCACAA-CTGCTTGAA-A-CTG--TT---------------TAAA--------------------AAC-TG-CCACAG-AA-CT--GCC--TATAGA-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTAG
gi|21 : taaA-CCCTATCAAAATCAT-GTGT--AAATAAT-CTATGGAA-TAAGCAAT--ACACTGCTCAA---CAATAGGAGAGTT-----AT---AG------A----AAGAAACAAACAAC--AAGAAAACA-AAAATT-GTTAATT-AATTTTTTA--TC-A-CATTC-TTATTT-CATTTAAGAAC-ACA-AACTTTA--CATTTTTTTCgt
gi|23 : gctaatatacaatttcTACTGAA-TTCTTAGCAGT---CAAGTAGTAG-T-AAAA-C-ACAA-CTGCTTGGA-A-CTG--TTAGAAAA-----CTGCCAAATA--AT----CTC--AT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|24 : --TAAACTTTAC-----AAATATG-TATGTTAA-TTC--ATATTTATAC-----TT-T--AT-TACAGTAACGGTAAAT---CAAAATAA---------AAAATA-----------AAAATC-T-TATA-CAT--GTAGTTACTAAATTTT-A-AAA-T-A--AA-ATTTCA-TAC--------g
gi|25 : T--TA----AAACAACA-GAG--GATG-AATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATTAA-A-C--AAAA--GTAA--TT-AT----------TATAA----T-A--TAAGATCCCAACTCTAC-----ATT
gi|26 : A--GACTGTCAT-TT-T--ACA-GCAATCAA-AAG-CAACAA-AACAA-AA---T-G--CA--AAACGCGCGCCATAAAAGCAGG-----GCAC-AG-AGTT-ATCGGTC-CTTTCTCTTATT-T-
gi|27 : TACCAGTTTACCC-TAGTAG-T-AAAA-CCACAG-CTGCTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AT----CCC--TT---AAC-TG-CCAAA
gi|28 : AGATAT-TT---AATACATTAAAATAAAT-TG-AACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----AG-TGAAAC-TG
gi|29 : ATGCGAT--CTCACAGAA-TTAAAGACA-TT--AA-A-------------------TAA--TTGAG----------C---A----TTG--TAAGATCCCAACTCTAC-----ATT
gi|3 : TCCAG-GAA--TTATTCAAAC--TCATT-AAATG-ATT----AA-TTCCATACGAC--TGAAGATTACTGGAAAC-CCTCAGATAAACTGCCCCAGAATCTCT-T-CGAAAT--A-A----A--AG-CTGTGTA---GTATATGATCCA-TATAACTTGTCATCT-TATAGAATTACAGTCATAATCCAAGA---AC-AAC-GTTCAG-ATTTT-AGTCCAAACATA-----ATAATCCA-CAC----ACTTGTCAGTT-CCGTCCTATT--TTT-TATGCATA-GTTCA-GAACTCTGAGTGCGC--C----------GATACA-AA-GTCGTGAAATCA--CATTT--GT--CGCAGTCTCTTCAT-AATTCTGATGTCACGTCGACCCGCAA-TGCGCAAGGTAAGGA-TAAT---AA-GACTA--ATGTGC------AAT-TCT-TCAT----T----T-CACA--AAG-TTGATAA-ACAT-CC-CATTT-TGC-TA-ATCTAC--ATGACT-CCACG-AA-GAAAAG-AGC---T-GGCAACACTC-TGAAAAA-GA-AATAAGAATTGAAAATAAT-ACA--------ATGATATTAATTTATA---ACAA-AGCT--------TATAA-CAAT----ATTATGGGC--TA--TG------ATGCAACATTTGTCGGGGGTCCAAATAT---TTTA--ACATACGGAGT--GTTTATATATAGTCAT--TA----AAACAACA-GAGGAGATG-AATGCGA--TCTCACAGAATTTCAATACA-AT--AATAAATCCA-A-CCAAGAA--ATAA--TTGAG----------T---A------A---GAGGTCCCAACTCTAC-----ATTTTAC--TTCCA-TTGCAAAAATGGACTCGGT-GTAGGA----C-GCG--CCGCACCGAGGGCCTTTCGTCCCGGGGTCCTCGTT-CT--GCAC--AAAAAT-CA-TAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACAGAGTCCTAGTAATGAGAAACATT-A-GCTTCGA-CG--ATC-TCGGAAGAA---AA-TCAAGAAG---G----------CGA-----CCATGGCCGTCGCTGAGATTAATAAAAAAT--ATCCAGTCTCATGGCA---ACGGT-TAA--AT---------CTAGGAT-AA-AC---ATCTG
gi|3 : cgACAGT-AAA--ATGAC--TGTA---AAAT-TA-ACTTTATCT---TATTCGCCTATCG-AACAGCCAAG--CTTACTAGTCTAGGATCCAA---TTGCTTTGATC-CACT-A--GACTGTCAT-TTCT--ACA-GCAATCAA-AGGCC-GCAATTCCTGTAATGCT-GTCCAATAAACGCGCGAC-------CATGCAT-TGCAC-AGTGGTT-ATC-G----------GTATT-G-A------ACGC-AGAAAGCAC-CTCGA-TGC--GTTTTTT-AACC--AGAT-CG-ACGTAAAATGACAC-G-AATATCTTT-AAAA-C-T-AATTTGA--TATAG-TTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTTTGTCTAA-TTGCACTT---TGG--TGAAACTGTTGTAAATTATATCAA-----T-AAGTTG-ATT------TAAATAA-TTTATAAACTTTGC-----AAATATT-GATGTTAATT-C--ATAA--ATAC-----TTGG--CTATA--GTAAAT-TAAAT---TAAAA-AA---------AAAA-A-----------AAAATCGT-TATA-TATCAGTAGTTACAAAA--TG-G-AAA-T-ACCAATATTTCACCACCAA-----TATAT--TTTAtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|3 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaGCTTGGATA-CTGG-TTAGAAAAGAAAACTGCCCAATATTATAGTCCTC--TT---AAC-TG-TCTATA-GA-CA--GG---TA-----AACTGGCTCTAAG--ATA-AGCTCATGTT-CA-TT-TGTCCTTGGgggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataaAGAAGCTTGTTCCAACACTCA-T-AA-TG-ATT----AA-TTCCA-AC-ACATTGAAA-TTGATG--AACACC--AGATAATCTGC---AGAAATTCT-TTCGAA-TT-A-AT--AA--AG-CTGTAGTTAT-TATAT--TC-AGTTCA-CTTGT--TC--AATA--ATTACAGG-----T---ATATT-CCCAAC-AACCGTTAGGTT-TATCCA--AATA-----A--ATC--ACAT----TC-----GGTT-CCGTCC-ATT--CTT-T--TTGCAAGTTC-CAAACT---AGTGC----------------AT-CA-AAAGT--TGAAA-CATACATTT--GTTCCGCAG---CTTCATTA-TTCTGATT-CAC-TCGGCCCGAAAGAGT-TAA----AGGA--A-T---AAGAACTATGGTGCA-------AGTTCCTCTCAT----T----TTCACA--A-G-TTGATAACACATGCC-CATTTATGGATA-ATCTAC--ATGACTTCCACGTAA-GAAAAG-AGCC-CTAGGCCAAACTCTTGAAAAAAGA-AATAA-AATTGAAAATAATCACA--T-GGTTATAAT--TAATTTATA---ACAA--GTTATA---------AACAAT----ATTAATGGT-ATG-GTGC-AGAAATGCAACATTTT---GGGGTCCATAAAT--ATTTT--ACAT-CGGAGT--GGTTATATA----TATCTTA----AAACAACA-GAG--GATGGAATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATCAACA-C--AAAA---TAACCTTGAG----------T---A----------AGGATCC--ACACTACTAACAATTTTAC-AT--CAGTTTC-AAA-TGGA-TCG-T-GT-GGA--GCC-G-GTTCCG-C-CGAGGGCCATTCGTCC--GGGTCCTCGTCATTA-GCAC--AAAAAT-CATTAATCT-CAAAAAAATATTCGTCGAGGCTTGATAATATACTT-GAAGAC-GTGTCCGACA-AGTCCA-GT-A--ATGAATAT--A-GCTTCGA-CG-AAT--TCGGAAG-A---AC-TCAGAAGG--CGACATCGCGTCAAA-----ACAA--TT-TCG-TGAGAT----------------CAGTCT-ATGAA-TACACAGT-AAA--AT-AC--T-TACTTA-------AC---ATCTGGATATCC-TCTATAG-AA-AGC--AGACCT-AC--ATATAG-ATC-AAATATT-CTT-G-TCGCACTGGATGACTGTCAT-TT-T--ACA-GCAATTCA-AAG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------AATGC-TATGCAC-AG-AGTTA--T-GTC-TTTT---TAATT-T-GAAT-TGACGCAATAACACACGC-CG--TGCTTTTTTTTTAAACCCGCGATCCGCAC-T-AAATGACAA-G-AATATCTTTCAAAA-CTT-AA-TTGAA-TATG--TTCTG-TCCAACGGT--ATTATGA-T-ATAC-T-GTATTG-A-TTTG--CCT-A-ATTCATTT--CTGGTTTTGAA-------AAATTAT---AA-----TCAAGTTG-ATTTTTTTATAAATAATTT--TAAAC-TTGC------AATATG-TATGTTAATT-C--ATAA--ATAC-----TT-----T-TA--GTAA-------------------------------------------------------ATA-CAT--GTAG-TACAAAATTTTCACAAA-T-A--AA-ATTTCA-CAA--------TATAT--TGTAgttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : aGCTTGGA-A--TG--TTAGAAAA----ACTGC-AAATA--AT----CTC--CTTTAAACGTG-CCAAAG-AA------------------ACTG---CTAAA--ATA-AGC--A-GTTACA-TT-TTTCCTTGGagcttggaatgttagaaaaactgcaaataatctcctttaaacgtgccaaagaaactgctaaaataagcagttacatttttccttgggttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : aagaagcttgttccaacactcataatgattaattccaacacattgaaattgatgaacaccagataatctgcagaaattctttcgaattaataaagctgtagttattatattcagttcacttgttcaataattacaggtatattcccaacaaccgttaggtttatccaaataaatcacattcggttccgtccattctttttgcaagttccaaactagtgcatcaaaagttgaaacatacatttgttccgcagcttcattattctgattcactcggcccgaaagagttaaaggaataagaactatggtgcaagttcctctcattttcacaagttgataacacatgcccatttatggataatctacatgacttccacgtaagaaaagagccctaggccaaactcttgaaaaaagaaataaaattgaaaataatcacatggttataattaatttataacaagttataaacaatattaatggtatggtgcagaaatgcaacattttggggtccataaatattttacatcggagtggttatatatatcttaaaacaacagaggatggaatgcgatatctcacagaattaaataaattaaaaatcaacacaaaataaccttgagtaaggatccacactactaacaattttacatcagtttcaaatggatcgtgtggagccggttccgccgagggccattcgtccgggtcctcgtcattagcacaaaaatcattaatctcaaaaaaatattcgtcgaggcttgataatatacttgaagacgtgtccgacaagtccagtaatgaatatagcttcgacgaattcggaagaactcagaaggcgacatcgcgtcaaaacaatttcgtgagatcagtctatgaatacacagtaaaatacttacttaacatctggatatcctctatagaaagcagacctacatatagatcaaatattcttgtcgcactggatgactgtcattttacagcaattcaaagcgcaatcctgaatctgtcaaaacgcgcgccaatgctatgcacagagttatgtctttttaatttgaattgacgcaataacacacgccgtgctttttttttaaacccgcgatccgcactaaatgacaagaatatctttcaaaacttaattgaatatgttctgtccaacggtattatgatatactgtattgatttgcctaattcatttctggttttgaaaaattataatcaagttgatttttttataaataattttaaacttgcaatatgtatgttaattcataaatacttttagtaaatacatgtagtacaaaattttcacaaataaaatttcacaatatattgtaaT--TA----AAACAA-A-GAG--GATG-A-TGCGAT-CCTCGCAGAA-TTAAATAAA-TTTAAA-AAATCAA-AAC--AAAA--ATAA--TTGAG----------T---A------A---AAGATCCAAATCGTAC-----ATTTTAC-ATTCCA-TTTC-AAAA-GGACTTGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCCCTTCGTCCC-GGGTCC-CGTC-TT--GCACCAAAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATAATTCGAAGACGG----CGACA-AGTCCAAGT-ATG--AAATATTAA-GCTTCGAGCGAAATCTTCGGAAG-A---AACTCAAGAAG---G-------CCCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATCAAT-CAGTCT-ATGAAATACGCAGT-AAA--AT-AC--T-TACTCATAT--A-AC---ATCTGGATATCC-TCTATAGAAACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-C-TTG-T--CACTGA--GACTGTCAT-TT-T--ACAGGCAATCAATAGG-C-GCAA-TCCTG-AAT-CT-GT-C---AAACG-GCGTC-------CATGC-T-TGCACAAG-AGTT-ATCGGTC-CTTT---TTA---T-GAAT-TGACGC-ATAACACAC-C-CGAATGC--TTTTTTTGAA-C--CGAT-C---C-T-AAATGACAC-G-AATATCTTTC-AAA-C-TAAA-TTGA--TATAG-TTCTGTTCCAACGGT--ATTATGA-T-ATATATGGTATTG-A-TTTT--GCT-A-TTGCATTT--CTGGGTTG----------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGCA----AAATATGTTATGTAAT-T-C--AT----ATAC-----TT-T--CT-TA--GTAAAT-CAAAA---AAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-AAT--GTAGTTACAAAATTT----AAA-TAA--AA-ATTTCA-CAA--------TATAT--gttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : gGCTTGGA-AACTG--TTAGAAA------CTGCCAAATA--AT----CTC--TT---AAC-T--CCAAAGAAA-CT--GCC--T-----------------AA--ATA-AGC--A-GTT-CA--T-TTTCCTTGGgtaaggcttggaaactgttagaaactgccaaataatctcttaactccaaagaaactgcctaaataagcagttcattttccttggtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|6 : gttaaaacaaagaggatgatgcgatcctcgcagaattaaataaatttaaaaaatcaaaacaaaaataattgagtaaaagatccaaatcgtacattttacattccatttcaaaaggacttggtgtaggagccgcgccgacgagggcccttcgtcccgggtcccgtcttgcaccaaaaaatcattaatctcaaaaatattcgtcgaggcttgatctaataattcgaagacggcgacaagtccaagtatgaaatattaagcttcgagcgaaatcttcggaagaaactcaagaaggccccaaacaaaatctcgctgagattaaaaaatcaatcagtctatgaaatacgcagtaaaatacttactcatataacatctggatatcctctatagaaacagcagctacatatagatcaattcttgtcactgagactgtcattttacaggcaatcaataggcgcaatcctgaatctgtcaaacggcgtccatgcttgcacaagagttatcggtcctttttatgaattgacgcataacacacccgaatgctttttttgaaccgatcctaaatgacacgaatatctttcaaactaaattgatatagttctgttccaacggtattatgatatatatggtattgattttgctattgcatttctgggttgaaattataaatcaagttgatttaaataatttaaactttgcaaaatatgttatgtaattcatatactttcttagtaaatcaaaaaaaaaaaaaaaaaaaatcttataaatgtagttacaaaatttaaataaaaatttcacaatatatgtaagTAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT-AC-AAC-GATA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|7 : TAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTCA-TGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAGT--AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-GAAAC-GC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AA--AG-CTGTAAA-ATATA-AT-ATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT-AC-AAC-GATA---AGTTT--ATCCACGAATA-----A--ATCCAACATTATCAT-----GTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtctctacacagacacgacgatcaaagt
gi|8 : TGCACTTGTCCAG--T-TTGCA-AA-GTTAGATAT-TTATTAGGA--CTAAA-TGAAT-TG-AACTGCT----T-----T------TAAAAAATATA--AT-AACTGATAGACTCAGCTTAATAAG-TGAAAC-TGCTAAGAATTAACTGCTTATAATGAA-TTCTTAGCAATTTACAAGTAGTAG-TAAAAA-CCACAA-CTGCTTGAA-A-CTGTTTTAGAAAA----ACTGCCGAAGA--ATAA--CTCAATT---AAC-TC-CCAAAG-AA-CTTGGCC--TA--GC-AACTG---CTAAATGATA-A-C--A-GTT-CATTT-TTTCCTTGGtctctacacagacacgacgatcaaagt
blockSeqs : G C T TTTACTTTCTTAGGCA T CA C TTC T A A ATA CTCAT AT T T AT . T C A TT TT AGTAGAT T . . AT G GGTAT T AT TG TT C . . . CCGA G GC . TT A C A T T ATC C . T CA AAC T TC A . A A . T TA GGG A . GC C TA G A . A . G TT A AA A . T . AGA . A AT T A . T T . T . ATG C A TA . GT AGAAGC A A A G A . TCA A T G AT AA GG A TC A CCC A A T A TA TCA CC A GCAATG T GA C G A CATCT GA GTCATAA A C AAACAAGC A CA ATA AA ACTTGTC G T CA G TG AG CA CTG CTGC T A T A CG T TA . TC G TCT AA AA T G G G GGTA TTATTTA G TAT CTTTGCT T C TGAAAT GCA T T C TG T A A G AA TT GT T G A CTTT C A AAGA G A C AAA AT G . A AGACCCCTCACGGCCAATAGGCATTGGCAG GG CAG C GTC T C AAA TACG C A GC ATAGT CT . . GA G A TAT T G TA T ACCA A CC TACTATTAT TAACA AA G A CT . . G TT CAC T CG A TG CA . . AA A N N GTGTC G N AATGAG TAA G AA CT A AACT CGACATCGCG . A G TAAT CA C C AT G A . AACTG C T AAA TTT G A A CA AC T TA G C ATA G A G AT G C TA G T C A G T G . CCAAT ATAAAAGC TC A T AA G T CTC GT G A CG T TT TT G C CG C C G A T . . T A T T T T T TA . C A G T T TG A T TC TGAAACTGTTGT ATC TTTGT T TTTTTA A T TA TAAAG T TT TC T TT CAAAG TAA A CA CGGTAAATCAAAATAAAAAATA TC G CA TCAC . A CC T C CAA . T T ATATAAAGCTAGCTA TT G AG A . TATT AGA A G C . AGAATAATAAA A CT G CA TAATA T T A T . A C G T A TT A A GAAA TT AGTC AA TTA G C A CTTG TT TAGA GCT TG G TC T A T C
blockSeqs : G . T . . TT . TTC C . A AA TCA AT T T A . T C . TT TT AT . . . AT . GGTAT T AT TT TT . . . . A A C . TT A . A T T C . . A A . G TA A . A A . T TA . A . CA T TG . A . A . . TC A AA C . A . . . . . A . . T . . G . ATG C A A . A AGAA T C A T A . . A . . . GA GG . . T . T . . . A C . . AGTTAT T G . . A TTCA . TT C . AACCGTT A AA A AA TATCAT . . CA G CA A CA . GCC A . . . . . . . . G . TA CT T . . . . TAAT . TGG C . . TTT AA . T . G . . A . . T AC . . . CCTA T A GAC . A . TGG A A . A ATAAACAATATTAATGGTA G CA C T T A A TA C . . A . . . . . A TAT . . . . ATC G . TATAATAT . A . . AT . . . . A A C . A . . . . T C G GG . A NNNNN NN . N N . AAT CAG . G . T C . . AT A . . GACTG A G AA . . T . . . . . . . . . . . . . . . . . . . T . . . TAC C AT . . A G . . C . . C . AT . A C . . . . . . . . . . . T T T T . . . . G . . . . T . TTTTGAA A . . . A . . A . TT . A . . GG . . ATTAAATTAAAAAAAAAAA GT . . TA . . . . . . . T . GTAAGCTAGCTGC . . A G . T ACA . A . . TACATGTA . . T . . . . A . . . . . . . G A A . . AA . . . . . TTT T GCA . . . . . . . .
blockSeqs : TT . TT C . . AA TCA AT . . T . . . . TT TT AT . . . . . GTA . . TT T . . . . A A C . T A . A . . C . . A A . G TA A . A A . . T . A . CA T TG . . . . . . TC . A . . A . . . . . A . . . . . G . . . . A . A AGAA T A A G A . . A . . . AA G . . . . A . . . A T . . AAAATA T A . . A TTCA . GG A . GTTCAG T CG A A TATCAT . . . . TG G G . . A . . . . . . . . G . . CT . . . . . AT . A . . . TT A . T . T . . . . . T AC . . . T . . AGA . A . . . A . . TATAACAATATTATGGGC . . C T T T . TT C . . . . . . . . A TT . . . . CAC A . CATTGT . A . . T . . . . C C C . . . . . . A C G N . A AAT TA . A C . ACT GC . A . T . . . A A . . ACT T A TA . . T . . . . . . . . . . . . . . . . . . . . . . . CA C TA . . A . . . T . . C . T . G C . . . . . . . . . . . A . T T . . . . . . . . . . . TTAAA T . . . A . . . . TT . A . . T . . ATCAAAAAAAAAAAAAAAA T . . TA . . . . . . . . . TAAGCT . . G A . . GA . G . . TA . . A . . . . A . . . . . . . . T A . . . . . . . . CT . TG . . . . . . . .
blockSeqs : A . . . . . . . . . . T . . . . T T A . . . . . GTA . . T . . . . . . . . . . . . . . A . . . . . . T . A . . GAA A A A G . . . . . . . AA G . . . . A . . . . T . . AAAATA T A . . A TC . T A . GATA . CG A A AC . . . . TC G . . . . . A TC . . . . AAC A . TAA . . . . A . . . . A . . . . . . . . . . G G . . ATG A . . . . AA G . . . . . . . T A . . ACT C T A . . T . . . . . . . . . . . . . . . . . . . . . . . CA A T . . A . . . G . . C . T . . . . . . . . . . . . . . . . T . . . . . . . . . . . . TGAAA A . . . A . . . . T . A . . T . . GATTCATAATCAAATAT T . . TA . . . . . . . . . A . . . AG . A . . TA . . G . . . . T . . . . . . . . A A . . . . . . . . CT . GC . . . . . . . .
blockSeqs : AG A . . . . . . . . . . A G . . . . A . . . . T . . GTAG . A . . A TC . T . . GATA . . A A TC . . . . TC G . . . . . A T . . . . AC . . TAA . . . . . . . . . . . . . . . . . . . . . C C . . . A . . . T . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTTG . . . . . . . . . T . A . . T . . TAAATCAAAAAAAAAAA T . . GG . . . . . . . . . A . G . . TA . . A . . . . A . . . . . . . . A A . . . . . . . . CT . TC . . . . . . . .
blockSeqs : . . . . . . . . . . TG . . . . . . T . . . . . . . TA . . . . T . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . TA . . C . . . . T . . . . . . . . A A . . . . . . . . CT . GC . . . . . . . .
blockSeqs : . . . . . TT . . C . . . . . . . . . . . . . A A . . . . . . . . CA . GC . . . . . . . .
blockSeqs : . . . G . . . . . . . . . . . . A A . . . . . . . . CT . GC . . . . . . . .
blockSeqs : . . . . . . . A A . . . . . . . . T . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . C . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqCons : AA** T* TT TT AT***** ** GTA** ** ** TT G* ** *** **** TG ** TC ** AGAA** A* **** AA G* A*** AAAATA* TCC*** A* GATA**** A* CG A******* TGTCAC***** TN G* **** TAT AC**** A** TATTAT******************* T* ** TA** C* AAT**** CGG********* ***** C* ** A*** C******* TN* T** T* TNAAA********* ** GTAAATCAAAAAAAAAAA*************************** ******** ** A* AGA ***** **
originalCons : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTCAATGGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA--TCAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGT-AAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATGGAAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T--A-AT--AA--AG-CTGTANA-ATGTATAT-ATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT-AC-AAC-GACAAGCAGTTT-AATCCACGAATA-----A--ATCCAACAT----AC-----GGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-C--C----------GNT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAA-TT--AA-AAATCAA-A-C--AAAA--ATAA--TTGAG----------T---A----T-A--TAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAATGGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACA-AGTCCAAGT-ATGATAAATATT-A-GCTTCGA-CG-AATC-TCGGAAG-A---AA-TCGGGAAG--CG-------GTCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATAT-AA-AC---ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCC-------CATGC-T-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATT-T-AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTTTGAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAA---TAAAT---CAAAA-AA---------AAAA-A-----------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-CAC--------TATAT--TATATATAT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
finalCons : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAAA--TTA-TCATGAAAATTAAGTCATGTTCAT-GGCA-GTTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGCAT-----GTAC-TG-GAGCAG-TTATTTTC--AGC-GAAAAATGTA--AATGAGA--GAAGA--AAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA---CAATAGGAAAGTCTAATAAT---GGGAAAAAA----AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-TA-TGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAGTA-AACG-ATT----AAATTCCA-AC-AC--TGAAAATTGATG-AAAC-CC--AGATAA-CTGC---AGAAATTCT-T-CGAA-TA---AT--AA--AG-CTGTAAAATA-TATAT-ATC-A-TTCAACTTGTTCC---AATA--ATTATAGT-----TCCAATATTA-C-AACGATA----AGTTTA-ATCCACGAATAA-------ATCCAACATTGTCAC-----GGTT-CCGTCC-ATT--TTT-TATTTNCAG-TTCACGAACT---AGTGC-C--C----------GNT-CA-AA-GT--TGAAA-CA--CATTT--GT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTATA---ACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTGC-A-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CAT--TA----AAACAACA-GAG--GATG-AATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATCAAAC----AAAAA--TAA--TTGAGTATTAT-------------------AAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC-AAAT-GGACTCGGT-GTAGGA--GCC-GCG--CCG-A-CGAGGGCC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAAT-CATTAATCT-CAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACA-AGTCCAAGT-ATGATAAATATTA--GCTTCGA-CG-AATC-TCGGAAG-AAAT----CGGGAAGCGG---------TCCAA-----ACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AAA--AT-AC--T-TACTCATATA---AC---ATCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGG-C-GCAA-TCCTG-AAT-CT-GT-CA--AAACGCGCGCCC-------ATGCTN-TGCAC-AG-AGTTAATC-GTC-CTTT---TTATTT--AAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-T-AAATGACAC-G-AATATCTTTCAAAA-C-T-AA-TTGAT-TATAGTTTCTGTTCCAACGGT--ATTATGA-T-ATAT-T-GTATTG-A-TTTT--CCT-A-TTGCATTT--CTGGTNAAA---------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TT--TAAACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT-TA--GTAAGTAAATCAAAAAAAAAAA---------------------------AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-CAC--------TATAT--TATATATAT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
6 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): AGCATTCATTTTTCGCTTCCGGTAACCCTGTAACAGAAAGTCCAAGCTTTTTGTTGCACATATACTTTTTAAATCACTATAGTTCCCTGAAAACAATATAGATGTCCTGCATTGTCTTAAATATATCATGTGTGAGACTTTAGGGAAATTTGAGGGACCTTATAACTTTTTATTTTCAATTCAGTTAAGTCCTGAAAACAAAAGAAAGTCCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTGCAGGACAAATTTGAGTCTACACAGTTTCTACAAAGTCACAACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTTCTGAATTTCCTTGCATTAGGACAGGAGAGATTAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATATGCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Unaligned ( gi|11 ): GTGCAAGACTTTTTGTTGCACATACTTTTATCAACAAGTCCTGAAAAGCAATGTAATATGTCCTACATTTTCCTGAATATATCATGTGTGAGACTTTTAGGAAATTTGAGGGACTTATAACTTTTTTTTAATTTCATCAGTAAGGTTCTGAAAACCAAAAGAAAAGTCCTGTAAAGACCTCTGCAGTGAGTAAGTGGGCCATTGTGCGAGGACATTTGAGTAATGTATTTGTCCTACAAGTTCCTAAAGTCACACTATGTTATGGGTATATTAAAGGATCAACTGCACAGGAATAAGAAGTCCTGAACTTATCCCAACTGCTAGGAGAGAGAAGTGGACTGGAAAAAGGAAGTCTGGGACTTCCAGGGATATTTCAAATTTCAACGAAGTGGGATTTATTTTTGGAGG
Unaligned ( gi|12 ): AATAAACGCATTCATTTTTCCTTGGGTAACCCTGTACAGAAAGTCCAAGACTTTTTGTTGCATCATATACTTTTTAATCACAAGTCCTGAAAAGCAATATAATGTCCTGCATTGTCTTAAATATATCATGTTGTGAGACTTTTAGGAATTTGAGGGACTTATAACTTTTTATTTCAATTCAGTAAGTCTCTGAAAACAAAAGAAAGTCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTTGCAGGACATTTGAGTCTACAAGTTCTACAAAGTCACACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTCATGAATTTCCTATGCATTAGGACAGGAGAGAAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATA
Unaligned ( gi|13 ): GCTTTTAGGACACCTCTGTACAGAAAGTCCAAGACTTTTTGTTGCACATGCTTTTATCAACAAGTCCTGAAAAGCGATGATAATGTCCTGCATTGTCCTGAATATATTCAGCTGTGAGGAACTTTTTAGGAAATTTGAGGACTTTTATTTCATCAGTAAGTCCTGAAAAACAAAAGAAAGTCCTGTAAAACCATCTGCTGTTGTAGTGGGAATTTGCAGGATATTTTGAGTAATTGTATTTTGTCCTACAAGTTGATATTCAAGGGCAAATTGCAGGAATAAGAGCCTGAATTATCCCACTGCTTAGACAGAGAGATAGTGGGACGGAAAAGGAAGTCTTCAGGATTCCAGGGATTATCCTTAAAATATTCAAGAAAGTGGGATAATTTTTTGGCAGGGA
Unaligned ( gi|22 ): ATGTTACTGGGATATTTAAGGAGAATGGCAGAATAAGAAGTCTGAATTATCCACTGCATTAGGACAAGAGACTCAGTGGACTAGGATAAAGGGAAGTTCAGACTTCCAGGGATGATTCCTTCAAATATCAGAAAGTGGGATTTATTTTTGGAGGG
Unaligned ( gi|30 ): GGGATATCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111
lowQualScore : 1 1 555555555555555555 111 1 1111 11111 1 2 111 1 2 2222222 22 1 1 22 22 1 1 1 1 2222 11 11 1 1 111 1 2222 11 222 11 1 11 1 1111111 111 1111 1 11 1 1 11 1 11 11 111 11 1 11 111 22 1 1 111 11 11 1 11 111111 2222 1 1 111 3333 222222 111 222222 2222222 3333 111 2222 11 11111111 111111 11 1 11 111 7777777777777 1 1 1 11 1 11 11 11 111 222 1 1 1 3333 22222222 1 4444444 1 1 44444444444 1111111 1 11 1 1 1 11 1 1 1 1 222222 22222 1 1 333333 11 111 11 777777777777777777777777777777777 11 1111 222 2222 11 1 11 33333 1111111 1 111 444444444444444 11111 11 11 11 111 1 11 11 11 11 111111 111111111 1111 11 11 1111111 555555555555555555555 1111 11 2222222 1111 111111 11 11 11 111 1 2222 1 11111111 22 1 111 1 11 111 1 2 22222222222222 111 11111 111111 222222 1 11111 11111111 3333333333 5555555555555555555555 33333333 1 1111111111111111111111111111111111111111111111111 11 11 2222 22222222222222222 11111 1111 11111
lowQualScore : 6 3 7 3 888888888888888888 77 0 8 000 1 8 0 2222 99999 11 3 0 8 1 444 0 0 8 0 66 11 1111111 8 8 8 22 8 6 6 0 77 22 0 3 44 0 0 0 0 0000 2 22 33 66 3 0 3 0 3 5 666 0 1111 1 33 444 0 33 44 0 8 6 6 0 11 6 7777777 444 7777 8 55 3 77 8 0 0 11 0 8 8 99 0 0 11 0 5 11 0 1 33 777 33 0 33 1 111 9 33 0 1 0 555 11 99 0 11 222222 1 3 3 99 7 0 6 5555 7 6 6 99 7 6 3 99 3 111 6 6 6 8888 99 999999 222 6 6 7 555555 99 6666666 0000 6 111 3333 99 00 66666666 99 999999 3 6 6 88 3 3 1 77 33 777 0000000000000 1 0 0 0 33 0 33 33 33 2 777 333 99 333 0 0 0 0 1111 22222222 0 555 9999999 0 0 66666666666 8888888 0 00 0 0 3 0 33 2 0 4 0 0 0 000000 7 7 22222 0 3 0 555555 33 3 777 33 333333333333333333333333333333333 22 9999 2 999 3 1 4444 33 2 0 33 66666 4444444 6 99 6 2 5 5 77 5 5 555 77 77 3 77 77 000 999999999999999 0 44444 88 0 8 11 8 8 0 11 8 11 111 8 6 33 0 8 99 11 8 0 8 11 6 0 7 2 777777 8 222222222 1111 8 00 88 8 9999999 111111111111111111111 0 3 8 4444 33 8 8 11 1 6 99 6666666 777 3333 111111 8 1 8 11 11 8 11 8 8 444 8 0 0 8 8 99 6 6 99 6 6 3 3 888 6 777 1111 3 66666666 6 6 00 1 5 000 5 5 3 6 77 6 44 99 9 2 99 6 6 6 6 6 6 6 6 6 6 666 3 9 7 99 6 6 6 3 6 6 99 0 99 6 33333333333333 222 66666 5 666666 5 5 66 0 000000 5 7 5 77 1 77 44444 66666666 77 0000000000 5 5 2222222222222222222222 555 5 77 9999 5 5 77 5 5 00000000 99 3 0 8888888888888888888888888888888888888888888888888 11 8 11 3 6 0000 777 5 1 5 5 33333333333333333 4 66 1 66 55555 4 8 5 4 4 4 4 4 3 3 77 4 1 6666 44 0000 44 555 3 3 3 44444 77 00000 555 77 3 44 3 3 3 3
lowQualScore : . . . . .................. .. . . ... . . . .... ..... .. . . . . ... . . . . .. .. ....... . . . .. . . . . .. .. . . .. . . . . .... . .. .. .. . . . . . . ... . .... . .. ... . .. .. . . . . . .. . ....... ... .... . .. . .. . . . .. . . . .. . . .. . . .. . . .. ... .. . .. . ... . .. . . . ... .. .. . .. ...... . . . .. . . . .... . . . .. . . . .. . ... . . . .... .. ...... ... . . . ...... .. ....... .... . ... .... .. .. ........ .. ...... . . . .. . . . .. .. ... ............. . . . . .. . .. .. .. . ... ... .. ... . . . . .... ........ . ... ....... . . ........... ....... . .. . . . . .. . . . . . . ...... . . ..... . . . ...... .. . ... .. ................................. .. .... . ... . . .... .. . . .. ..... ....... . .. . . . . .. . . ... .. .. . .. .. ... ............... . ..... .. . . .. . . . .. . .. ... . . .. . . .. .. . . . .. . . . . ...... . ......... .... . .. .. . ....... ..................... . . . .... .. . . .. . . .. ....... ... .... ...... . . . .. .. . .. . . ... . . . . . .. . . .. . . . . ... . ... .... . ........ . . .. . . ... . . . . .. . .. .. . . .. . . . . . . . . . . ... . . . .. . . . . . . .. . .. . .............. ... ..... . ...... . . .. . ...... . . . .. . .. ..... ........ .. .......... . . ...................... ... . .. .... . . .. . . ........ .. . . ................................................. .. . .. . . .... ... . . . . ................. . .. . .. ..... . . . . . . . . . . .. . . .... .. .... .. ... . . . ..... .. ..... ... .. . .. . . . .
lowQualScore : 7 3 3 3 333333333333333333 44 8 0 222 4 0 6 6666 88888 88 6 4 0 0 000 6 0 0 8 44 66 6666666 0 0 0 00 0 0 0 8 00 00 8 8 00 0 0 0 0 8888 0 55 88 55 2 0 2 2 2 5 222 0 2222 0 22 111 8 00 66 6 0 0 0 8 00 0 0000000 000 0000 0 66 8 22 0 6 8 00 6 0 0 00 6 6 44 8 4 00 8 0 88 555 88 0 88 0 000 8 88 0 0 0 000 88 22 0 22 888888 0 2 5 22 3 7 7 8888 3 7 7 22 3 7 3 22 3 777 7 7 7 0000 22 777777 222 7 7 3 222222 22 8888888 0000 7 333 3333 00 33 88888888 88 333333 7 7 7 33 3 2 0 77 00 555 2222222222222 0 0 0 0 88 0 88 88 88 5 555 222 88 555 0 2 0 0 2222 88888888 0 000 0000000 0 0 88888888888 0000000 0 88 0 0 2 0 88 5 0 2 0 0 0 222222 0 0 55555 0 2 0 000000 22 2 555 22 555555555555555555555555555555555 55 5555 5 222 2 0 0000 88 5 0 88 88888 3333333 7 22 7 0 7 7 99 7 7 999 99 99 6 99 99 000 000000000000000 7 33333 88 8 0 00 0 0 8 00 0 00 888 0 0 00 8 0 00 00 0 8 0 00 0 8 2 2 222222 0 444444444 8888 0 88 22 0 4444444 222222222222222222222 8 8 0 8888 00 0 0 66 7 7 22 8888888 555 5555 888888 0 4 0 00 00 0 00 0 0 000 0 8 8 0 0 22 7 7 22 7 7 7 3 777 7 555 7777 5 22222222 7 7 55 4 7 000 7 7 3 7 77 7 88 22 3 5 22 7 7 7 7 7 7 7 7 7 7 222 2 8 3 22 7 7 7 3 7 7 22 0 22 7 77777777777777 777 77777 7 444444 0 7 99 4 888888 0 1 7 99 7 99 33333 77777777 99 4444444444 1 7 3333333333333333333333 999 7 99 4444 7 7 99 7 7 77777777 22 2 0 8888888888888888888888888888888888888888888888888 00 0 88 8 7 8888 333 7 7 0 0 66666666666666666 4 11 0 11 66666 4 9 9 4 0 0 0 0 1 1 33 3 5 5555 22 8888 22 444 1 1 3 88888 99 88888 888 99 3 66 3 3 3 3
consensus : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTT--TTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTC-ATGGCAG---TTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGAT-GAAGAATAAACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAATCAATAGGAAAGTTTA-AT--AAT---GGGAAAA----AA-AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-T-ATGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAG-TAAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGAT-G-AAACCC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T-A--AT--AAAGCTGTA---A-TATATATATC-A-TTCAACTTGT--TTC-AATA--ATTATAGT-----TCCAATATTC---AC-AAC-GATAAG----TTTAATCCACGAATA-----A--ATCCA-ACA-TTATCACGGTT-CCGTCC-ATT--TTT-TATTTGCA-GTTCACGAACT---AGTGC-CTG--------CGNT-CA-AA-GT--TGAAA-CA--CATT--TGT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTAT---AACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTG-CA-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CA----T--TAAAACAAC-AGAG--GATG-AATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATC-AA-A-C--AAA--AATAA--TT--GAG---TAT--T---------ATAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC--AAA-TGGACTCGGT-GTAGG--AGCC-GCG--CCG-A-CGAGGG-CC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAA-TCATTAATC-TCAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACA-AGTCCAAGT-ATGATAAATATT-A-GCTTCGA-CG-AATC-TCGGAAG-A---AA-TCGGGAAG--CG-------GTCCA-----AACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AA--AAT-A--CT-TACTCATAT-A--AC---A--TCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGGC-GCAA-T-CCTG-AAT-C-TGTC--A-AAACGCGCGCCCAT----GCT-TGCAC-AG-AGTTAATC-GTC-CTTT---TTA-TT-TAAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-TAAA-TGACAC-G-AATATCTTTC-AAAAC-T-AATT-GAT-TATAGTTTCTGTTCCAACGGT--ATTATGAT-AT-AT-T-GTATTG-A-TTTTC--CTA-TTGCATTT--CT-GG--TTAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TTTA--AACTTTGC-----AAATATG-TATGTTAATT-C--ATAA--ATAC-----TT-T--CT--TA--GTA---A--G-T-AAATCAAAA-AAAAAA--------------------A-AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-CAC--------TATAT--TATATATAT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
Reference ( family-657 ) : CATGTCAAAGTGGAAGGCA-GTTTGGTAGCAGTTATTAAGCCTTCCCAGTT-TTAC-TT-CCTAGGC-GTTTATTTTAGCNGTTCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AAAGTGATAA-A-TTA-TCATGAAAATTAAGTCATGTTC-ATGGCAG---TTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCA--GC-GAAAAATG-TA-AATGAGA--GAAGAA--AACTTGCTTAG-C-GACTGCTTAGGAA-CTGCTA-GT---ACGTTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAANTTTTCACA-ATTAAAA-CCCTATTAAAATCAG-GTGTTNAAAGAAT-CTATGGAAATAAGCAAT--ACACTGCTCAA-CAATAGGAAAGTCTA-AT--AAT---GGGAAAA----AA-AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCCATTTCAGAACAACATAAATTTA--CATTTTTTTCCCCANAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAANT-T-ATGAAACAAAATTTTCATTTAA--TTCGAGT-TNGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TNATTCAAACACTCAG-TAAACG-ATT----AAATTCCA-AC-AC--TGAAAATTGAT-G-AAACCC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T-A--AT--AAAGCTGTAA--AATATATATATC-A-TTCAACTTGT--TCC-AATA--ATTATAGT-----TCCAATATT----AC-AAC-GATAAG----TTTAATCCACGAATA-----A--ATCCA-ACA-TTGTCACGGTT-CCGTCC-ATT--TTT-TATTTNCA-GTTCACGAACT---AGTGC-C----------CGNT-CA-AA-GT--TGAAA-CA--CATT--TGT--CGCAG---CTTCAT-A-TTCNGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGA-TA-T---AA-AACTATANTGCGCTT---TAGT-CCT-TCAT----T----T-CACA--A-G-TTGATAA-ACAT-CC-CATTT-TGGATA-ATCTGC--ATGACT-CCGCG-AA-GAAAAG-AGCC-CT-GGCAACACTCTTGAAAAA-GA-AACAA-AATTGAAAATAAT-ACA--A-AATTATGGTA-TAATTTAT---AACAA-AGCTAGACCCC-CACGACCAAT----ATTA--GGC-GTA-GTG-CA-AAATGCAACATTTG-CGGGGGTCCANATAT--ATTTA--ACAT-CGGAGT--GGTTATATA----CA----T--TAAAACAAC-AGAG--GATG-AATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATC-AA-A-C--AAA--AATAA--TT--GAG---TAT--T---------ATAAGATCCCAACTCTAC-----ATTTTAC-ATTCCA-TTTC--AAA-TGGACTCGGT-GTAGG--AGCC-GCG--CCG-A-CGAGGG-CC-TTCGTCCC-GGGTCCTCGTC-TT--GCAC--AAAAA-TCATTAATC-TCAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACA-AGTCCAAGT-ATGATAAATATT-A-GCTTCGA-CG-AATC-TCGGAAG-A---AA-TCGGGAAG--CG-------GTCCA-----AACAAAATC-TCGCTGAGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACACAGT-AA--AAT-A--CT-TACTCATAT-A--AC---A--TCTGGATATCC-TCTATAG-AACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCAT-TT-T--ACA-GCAATCAA-AGGC-GCAA-T-CCTG-AAT-C-TGTC--A-AAACGCGCGCCCAT----GCTNTGCAC-AG-AGTTAATC-GTC-CTTT---TTA-TT-TAAAT-TGACGC-ATAACACAC-C-CGATTGC--TTTTTTTGAACC--CGAT-CG-AC-TAAA-TGACAC-G-AATATCTTTC-AAAAC-T-AATT-GAT-TATAGTTTCTGTTCCAACGGT--ATTATGAT-AT-AT-T-GTATTG-A-TTTTC--CTA-TTGCATTT--CT-GG--TNAAA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TTTA--AACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT--TA--GTA---A--G-T-AAATCAAAA-AAAAAA--------------------A-AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-CAC--------TATAT--TATATATAT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCCAG--T-TTGCA-AAAGTTAGATAT-T----AGGAGACTAAA-TGGAT-TG-AACTGCT----T-----A------TAACTGGTGTCTTGT-AA--GGTANACT--GCT-----AG-TGAAAC-TGCTAAGAANTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|1 : AGTG--AGGCA-GTT--GTAGCAGTTATTAAGCCTTCCCAGTTGTTAC-TTGCCTAGGC-GTTTATTTTAGCCGTTCCTTA-CCTT-CCTTAGCCAATCTTTTCTATTCTGG---AAGTAATAA-AATTA--CATTTAAAATAAGCGA-ATAC-AGAG-AGATATTTTTCTTTA-GCCTTACC-AGTT--CGT-AAGC-----A-GTAC-TGAGAGCAGCTTATTTTCA--GC-GAAAAATG-TA-A-TGAGATTGAGGAA--A--CTGCT-AG-CAGACTGCTTAGGAATCTGCTAAGT----CATTC--ATATAATTGGTAGTGT-CTAATGAATATTCA-GGCAATACAATGAGGAT-TTA-CTAGTAG-CAA---TG-CTAGCAATAGGAGATTTACAATTCTTCACA--TTAAAA-CACTATTAAAA-CAGTGTGTTCCA-GAATACTATGGTATTA-GCAATTAACACTATTCAA----------AGTTTATATCTAAT---GGGGAAATAATAATAAAAAAAAAACAATCAAAGAAAATAT-AAATT-GTAAATTAA-TTATTTAGTTCAATCATTT-TTGTT--CATTTCAGAACA-CATAAATCTAATTATTTTTTTTCCCATATCAAAAATTGGAAAAGAG---AAAAACT-AATGAA--TGTTGACTAAATT-TAATGAAACAAAAATTTCATTTAGATTTCGTCTATTGTAAGTATATA---TAATAC-ATGAT--ACATCCACAT-TGAACTTCCAG------TTATTCA---TCTCAGTTAAACGCACTTTTAAAATTCCA-AC-AC--TG--AATTGAT-GCAAAACC--AGACAA-CTGC---CGAAATTCT-T-CGGA-TCAATAT--AAAGCTGT--------TGTATATT-A-TTC-ACTAGT--ATC-AATA--AATATTGA-----TCCAATATTC---AC-AAC---CAAGCAGTTTTAATCCAC-AATATCCACA--ATCCA--------CTACAGTT-CCGTCA-TTT--TTT-TA-TTGCA---TCAC-AACT---AGTGC-CTATGTTTCTATGTT-TA-AA-GT--ATTAA-CA--CATTTATGT--C-CAG---CTTCAT-A-TT-AGA-TTCAC-TCGGCCCGGAA-AGT-CAGC---AGGA-TA-T---AA-AACTATATTGTGCTTGC-TAGT-CCT-TCATGAAAT-------ACA--A-G--TGATAA-ACAC-CT-CATTT-TGGATA-ATCTGC--ATGA------TG-AA-GAAAAG-AG-T-CT-GGCAACATTCTTGGAAA---C-AACAA-A--TGAAAATAAT-ACATTACAATTATGGTA-T-ATTTATATAAACAACAGCTAGATCCT-CACG-CC-AT----AT----GGCTATA-GTGCCA-AAATG--GCATTTG-TGGGGG-CCAAATAT--G-TTA--A-AT-CGGAGT--GGTTATAT-----CATTATT--TAAAACAACAAGAG--GATG--ATG-GAAATCTCACAGAA-TTAAATAAA-TT--AA-AAATC-AA-A-C--AAAAGAAT-A--TTGAGAG---TCT--TAATGTATAAATAAGATCACACTTCTAC-----ATTTTAC-ATTCCA-TTTC--AAA-TGGACTCGGTAGTAGGAAAGCC-GCG--CCG-A-CGAGGG-CC-TTCGTCCG-GAGTCCTCGTC-TT--GCAC--AAAAATTCATTAATCTTCAGAAA--TATTCGTCGAGG-TTGATCTAATACTTGGAA-AC-G----GCCCA-AGTCCAA---ATAATAAATATT-ATGCATCGA-TG-AATCATCGGAAG-ACTCAA---GGGAAGACCA-------GTCCAATATTAACAAAATC-TCTCTGAGAT---TGAAAAATC-AT-CAATCT-ATGAAATACACAGT-AAACAAT-ATCTT-TACTCATAT-AACAC---A--TCTGGATATCC-TTTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-CA---TT-CTTTG-TC-CACTGA--AACTGTCAT-TT-T--ACA-GCAATCAA-A-GC-GCAA-T-CCTG-AAT-CTTGTT--A-AAACGCACG-CCAT----CCT-TGCAC-AG-AGTT-ATC-GTC-CTTT---TTATTT-TAAATATGACGC-ATAACACAT-C-CGA-TGC--TTTTTTTGAACC--CGAT-CG-AT-TAAA-TGACAC-GCAATATCTTTCAAAAAC-T-AATT-GATACATTGTTC---TTTCAACGGT--TATATGA--ATAAT-T-GTATTG-A-TTTCC--CTA-TTG-ATTT--CT-GA--TT-GA-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TTTA--AACTTTGC------AATATG-TATGTTAATT-C--ATAA--ATAC-----TT-T--CTTATA--GTAACGA--G-T-ATA-CAAAA-AAGAAAAAACAAAAAAAAAAAAAAAAA-AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAATT-A--AA-ATTTCA-TACTGAAACTTTATATGATATATATAT-ATATTAATATATTATATTATATATAATATTGTA---AGCAAAGCTACATGTAGCTTGCACTTGTCCAG--T-TTGC--AAAGTTAGATATAT----AGAGGACCAAG-TGGAT-TGAAACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAAACT--GCTA----AG-TGAAACTTGCTAAGAATTAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAATAGTAGTT-AAAA-CCACAA-CTGCTTGGA-A-CTG--TTAGGAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-TACTG---CTAAAT-ATA-AGC--A-GTT-TA-TT-TTTCCTGGG
gi|10 : ttaaagtgtgagatatgatattgcgaacccattcCGAGTCG-ATT------TAA-------TA--AACTT-GC-----AAATATA-TATGTTAA-T-CTCATTA--AAACCAAAGTA-TAACT--T---GTA---A--G----ATTCATAA-TCAAAT--------------------ATAAAATC-TCTATAGCGT--TTAGTTACAAATTTTT-A-AA--T-A--AA--TTTTA-TAT--------GATAT--TATATATATTATATT-------------------------ATATAAAGC-TAGCT-------A-TTGCACTTGTCCAGTTT-TTGCA-AAAGTT-GA-AT-T----AGG-GACTAAA-T-GCT-TG-AACTGCTAGAATAATAAA------TAACTGGTATCTTGTAAA--GGTAGAT----CT-----AGTTGAAACTTGCTAAGAA-TAA--GCTTATACTGAA-TTCTTAGCAGTTTACAAGAAGTAG-T-AAAA-CCACAA-CTGTTTGGA-A-CTG--TTAG--AA----ACTGCCAAATA--AT----CTC--AT---AAC-TGCCCAAAG-CATTT--GCCT-TA--GCAAACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTa
gi|14 : AAA--GAAT-TG-AACTGCT----T-----ACATGTATAACTGGTATCTTGT-GA--GGTGTACT--GCT-----AG-TAAAAC-TGCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CAACAA-CTGCCTGGA-A-CTG--TTAG-TAA----ACTGCCTAATA--AT----CTC--TT---AAC-TG-CCTAAG-AA-CT--GCC--TA--TG-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|16 : ttattctaaataacttttctaactcgatcattcaataaaaaaaagtttagaattttttttttctttcattagactggaatttgcaaaaataaatgcaagctagttgtgagatctggctcttatgtgttaaaaatgctagccttatgataaccagttccactttgcCATGTCAAAGTGGAAGGCA-GTTTGCTAGCAGTTATTAAGCCTTCCCAGTT-TTA------------------TTTTAG-AGTTCCCTAACCTT-CCATA-----------CTCTTCTGAC-AAATTGGTG------------GAAA--CAAG-CA-GTTC-AAAACAG---TTTTTC-TTA-GCTTTCCC-TGTTT---TTAACCAGTAGATCTAC-TG-GAGCAG-TTATTTTCA--AT-GAAAAATG-TA-AATGAGAT-GAAGAA--AAC-TGCTg
gi|17 : ttaaggtgacaaaatatgtatataaagtaaacacttcccataATC-GTCTCTTT---CTT-TTGTAAAT-TGACGC-ATAACACAC-C-CGAT-GC--TTTTTCT-AACC--CGAT-CG-AC-TAAA-TGACACTG-AATATCTT-C-AAAAC-T-AAT--GAT-AAAAGTT-CTGTCCAAACGGT--ATTATGAT-AT-AT-T-GTATTGTATTTTTC--CTATTTGCATTTTCCT-GA--TTAAA-------AATTTATA--AATTTGTTCAAATTGTATT------TAG--AA-TTGA--AA-TTAGCTAAAGAAATAAT-TATGTT
gi|18 : ttTATAT-GTATT--------------------------TA---AGC-T--------------TGCATTTTTCCAG--T-TTGCG-AAGTTTAAAT---T----AGGAG--TAAA-TAGAT-TG-ATC-G--------------------AACTGTTGTCTTGT-GA--GCTAAACT--GCT-----AG---------------AAATAACTGCTTATACTGAA-TTCTTAGCAGCTTACAATTAGTAG-T-AAAACCCACAA-CTGTTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AA----CTC--TT---AAC-TG-CTAAAG-A---T--A-----A--GC-AG-TA---CT----------------GTT-TA-TT-TTGCCTTGGtgaaaattttc
gi|19 : agat----T-----A------TA--TGGTGTCTTGT-AA--AGTGGACT--GCT-----AG-TGAAAC-TGCTAAGAAATAACTGCTTATACTGAA-TTCTTAGCAGTTTACAAGTAGTAG-T-GAAA-CCACAA-CTGCTTGAA-T-CTG--TTTAAAAA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-TCAAAG-AA-CT--GCC--TA--TC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGGgta
gi|2 : CATGTCAAAGTGGAAGGCACGTTTGGTTGCAGTTATTAAGCCTTCCCAGTT-TTACTTT-CTTAGGCAGTT--TTATAGCAGTTCTATAACCTTCCCTTAGCCTT-CTTTTCTATTCTTGCAAAAGTAATAATA-TTACTCATGAAAATCAAG-CA-GTTCAATGGCAG---TTTTTC-TTA-GCCTTACCAAG--TTCG-TAAGC-----A-GTACTTA-GAGCAG-TTATTTTCA--GCGGAAAAATG-TA-AATGAGAT-GAGGAA--AACTGGC-TAGCC-GACTGCTTAGGAA-CTGCTA-GTCCGATGTTCGCATATA--TGGTAGTG-TCTAATGAATATTCAAGGCAATACAATGAGGCTCTAAACTTG-AG-CAAATCTGCCTAGCAA----GGATTTACAATTTTTCAAACATTAAAACCCCTATTAAAATCA--GTGTTCAA--AAT-CTATGG-AATAAGCAAT--ACACTATTCAA-CAATAGGAAAGTTT--AT--AATGGGGGGAAAA----AT-AATAAAAAAACAATGCAGAAAAA-ATAAAATTGGTAAATT-AATTATTTA--TC-A-CATTTGTTGTTTTCATTTCAGAAC-ACATAAATCTA--CA-TTTTTTCGCCATAT--CAATATGGAAAAGAGAGAAAA--CTAAATGGAATTGTTGACTAAATTAT-ATGAAACAAAA-TTTAATTTAAT-TTCGAGA-TTGTAA-TATAT---GTAATA----GATCTACATCC-CAGTTGAACTTCCAGAG----TAATTC-AACACTCAG-TAAACG-ATTTCA-AAATTCCA-AC-AC--TG-AAATTGATGG-AAACCT--AGACAA-CTGC---AGAAATTCTAT-CGGA-T----ATCAAAAGCTGT------TGTATATATT-A-TTC-ACTGGT--T-C-AATA--AATATATT-----TCCAATATTCA--GCAAAC-AAGCAG----TTAAATCCCCAAAT------A--ATCC--ACA-T----ACAGTTGCTGTCC-ATT--TTT-TATTTGCA-ATTCACAAACT---AGTGC-CTG--------CGTT-CATAA-GT--TGAAA-CA--CATT--TGT--CGCAG---CTTCAT---CTAAGATTTCAC-TCGGCCCGGAA-AGT-CAG----AGGATTA-TTTAAA-AACTGTATTGCGCTTTGCTAGT-CCT-TCAT----TGAAAT-CACAGCA-GTTTGATAA-ACAG-CCTCATTT-TGGATAGATCTGCAAATGACT-CCGTG-AAGGAAAAGAAGCCTTT-GGCAACACTGCTG------GACAACAA-AATGAAGAATAAT-ACA--A-AATTATGGTA-TAGTTAAT---AACAA-AGCTAGACCCCTCACGGCCAATAGGCATT---GGCAGTAGGTG-CA-AAATGCAACATTT--TGGGGGTCCACATATAAATTTACGACAT-CGGAGTGCGGTCATAT-----CA----T--TAAAACAAC-AGAG--GATG-AATGCGAT-TCTCACAGAA-TTAAATAAAGTT--AA-AAATC-AA-ATC--AAA--AATAA--TT--GAGTACTAT--T---------ATAAGATCCCAACTCTAC-----ATTTTACAATTCCA-TTTC--AAACTGGACTCGGT-GTAGG--AGCCGGCG--CCG-A-CGAGGG-CC-TTCGTCCC-GGGTCCTCGTC-CTTGGCAC--AGAAA-TCATAAATC-TCAAAAA--TATTCGTCGAGGCTTGATCT-AT-NNNNNNNNNN-N----NNNNN-NNNNNNNNN-NNNNNNNNNNNN-N-NNNNNNN-NN-NNNN-NNNGAAG-A---AA---GGGGAA--CA-------GTCCA-----AAC-AAATC-TCGCTGTGAT---TAAAAAATC-AT-CAGTCT-ATGAAATACAC-GTAAA--AATAA--CTGTACTCATAT-A--AA---ACTTCTGGATATCC-TCTAAAG-AACAGC--AG--CT-AC--ATATAC-ATC-AA---TT-CTTTG-TC-CACTGA--GACTGTCATGTT-TTAACA-GCAATCAA-AGGC-GCAAGT-CCTG-AAT-C-TGTT--ACAAACGCGCGCGCAT----TCTCTGCAC-AG-AGTTAATC-GTC-CTTT---TTA-TT-CAAATGTGACGC-ATAACACA--C-CGATTGC--TTTTTTTGA--C--CGAT-CG-AC-TAAA-TGACAC-G-AATATCTTTC-AAAAC-T-AATT-GAT-TACAGTTTCTG-TCCAACGGTTAATTATGATCAT-AT-TGGTATTG-A-ATTTC--CTATTTGCATTT--CT-GA--TGAAA-------GAATTATT--AA-----TCAAGTTG-ATT------TAGATAA-TTTA--AACTTTGC-----AAATATG-TATGTTAA-T-C--ATAA--ATAC-----TT-T--CT--TA--GT---------T-AAATCAAAA-AAAAAA--------------------A-AAAATC-T-TATA-CAT--GTAGTTACAAAATTTT-A-AAA-T-A--AA-ATTTCA-TAC--------TATAT--AATATA-AT-ATATT-------------------------GTA---AGC-TAGCT-------GCTTGCACTTGTCAAG--TGTTGCAGAAAGTTAGATAT-T----AGGAGACTAAA-TGGATCTG-AACTGCT----T-----A------TAACTGGTATCTTGT-AA--GGTAATCT--GCT-----AG-TG-AAC-TGCTAAGAATTAACTGCTTAT-CTGAATTTCTTAGCAGTTTACAAGTAGTAG-T-AAAA-CCACAAGCTGCTTGGA-A-CTG--TTAGAATA----ACTGCCAAATA--AT----CTC--TT---AAC-TG-CCAAAG-AA-C---GCCTTTA--GC-AACTG---CTAAA--ATAGAGC--A-GTT-CA-TTCTTTCCTTGGga
gi|20 : AT-TG-AACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----AG-TGAAAC-TGCGAAGAAATAACTGCTTATACTATA-TTCTTAGCAGTTTACATGTAGTAG-T-AAAA-CCACAA-CTGCTTGAA-A-CTG--TT---------------TAAA--------------------AAC-TG-CCACAG-AA-CT--GCC--TATAGA-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTAG
gi|21 : taaA-CCCTATCAAAATCAT-GTGT--AAATAAT-CTATGGAA-TAAGCAAT--ACACTGCTCAA-CAATAGGAGAGTT--------AT---AG----------A-AAGAAACAAACAAC--AAGAAAACA-AAAATT-GTTAATT-AATTTTTTA--TC-A-CATTC-TTATTT-CATTTAAGAAC-ACA-AACTTTA--CATTTTTTTCgt
gi|23 : gctaatatacaatttcTACTGAA-TTCTTAGCAGT---CAAGTAGTAG-T-AAAA-C-ACAA-CTGCTTGGA-A-CTG--TTAGAAAA-----CTGCCAAATA--AT----CTC--AT---AAC-TG-CCAAAG-AA-CT--GCC--TA--GC-AACTG---CTAAA--ATA-AGC--A-GTT-CA-TT-TTTCCTTGG
gi|24 : TA--AACTTTAC-----AAATATG-TATGTTAA-TTC--ATATTTATAC-----TT-T--AT--TACAGTA---ACGG-T-AAATCAAAATAAAAAAT-------------------A-AAAATC-T-TATA-CAT--GTAGTTACTAAATTTT-A-AAA-T-A--AA-ATTTCA-TAC--------g
gi|25 : ----T--TAAAACAAC-AGAG--GATG-AATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATT-AA-A-C--AAA--AGTAA--TT---AT---TATAAT---------ATAAGATCCCAACTCTAC-----ATT
gi|26 : A--GACTGTCAT-TT-T--ACA-GCAATCAA-AAGCAACAA-A-ACAA-AA----TG-C--A-AAACGCGCG-CCATAAAAGCAGGGCAC-AG-AGTT-ATCGGTC-CTTTCTCTTA-TT-T
gi|27 : TACCAGTTTACCC-TAGTAG-T-AAAA-CCACAG-CTGCTTGGA-A-CTG--TT-TAAAA----ACTGCCAAATA--AT----CCC--TT---AAC-TG-CCAAA
gi|28 : AGATAT-TT---AATACATTAAAATAAAT-TG-AACTGCC----T-----A------TAACTGGTGTCTTGT-AA--AGTACACT--GCT-----AG-TGAAAC-TG
gi|29 : ATGCGAT--CTCACAGAA-TTAAAGACA-TT--AA-A--------------------TAA--TT--GAG---CAT--T---------GTAAGATCCCAACTCTAC-----ATT
gi|3 : TCCAG-GAA--TTATTCAAAC--TCAT-TAAATG-ATT----AA-TTCCATACGAC--TGAAGATTACT-GGAAACCCTCAGATAAACTGCCCCAGAATCTCT-T-CGAAAT-A--A----AAGCTGTGT--AGTATATG-ATCCA-TATAACTTGTCATCT-TATAGAATTACAGTCATAATCCAAGA------AC-AAC-GTTCAGAT--TTTAGTCCAAACATA-----ATAATCCACACACTTGTCA--GTT-CCGTCCTATT--TTT-TATGCATA-GTTCA-GAACTCTGAGTGCGC----------CGATACA-AA-GTCGTGAAATCA--CATT--TGT--CGCAGTCTCTTCAT-AATTCTGATGTCACGTCGACCCGCAA-TGCGCAAGGTAAGGA-TAAT---AA-GACTA--ATGTGC------AAT-TCT-TCAT----T----T-CACA--AAG-TTGATAA-ACAT-CC-CATTT-TGC-TA-ATCTAC--ATGACT-CCACG-AA-GAAAAG-AGC---T-GGCAACACTC-TGAAAAA-GA-AATAAGAATTGAAAATAAT-ACA--------ATGATATTAATTTAT---AACAA-AGCT--------TATAA-CAAT----ATTATGGGC--TA--TG------ATGCAACATTTGTCGGGGGTCCAAATAT---TTTA--ACATACGGAGT--GTTTATATATAGTCA----T--TAAAACAAC-AGAGGAGATG-AATGCG--ATCTCACAGAATTTCAATACA-AT--AATAAATC-CA-A-CCAAGA--AATAA--TT--GAG---TA-------------A-GAGGTCCCAACTCTAC-----ATTTTAC--TTCCA-TTGCAAAAA-TGGACTCGGT-GTAGG--A--C-GCG--CCGCACCGAGGG-CCTTTCGTCCCGGGGTCCTCGTT-CT--GCAC--AAAAA-TCA-TAATC-TCAAAAA--TATTCGTCGAGGCTTGATCTAATACTTCGAAGAC-G----CGACAGAGTCCTAGTAATGAGAAACATT-A-GCTTCGA-CG--ATC-TCGGAAGAA---AA-TCAAGAAG---G----------CG-----ACCATGGCCGTCGCTGAGATTAATAAAAAAT--ATCCAGTCTCATGGCA---ACGGT-TA--AAT---------CTAGGATAA--AC---A--TCTG
gi|3 : cgACAGT-AA--AATGA--CTGTA---AAATTA--ACTTTA--TCT---TATTCGCCTATCG-AACAGCCAAG--CTTACTAGTCTAGGATCCAA---TTGCTTTGATC-CACT-A--GACTGTCAT-TTCT--ACA-GCAATCAA-AGGCCGCAA-TTCCTGTAATGC-TGTCCAATAAACGCGCGACCAT----GCATTGCAC-AGTGGTTA-TC-GG----------TA-TT-GAA------CGC-AGAAAGCAC-CTCGAT-GC--GTTTTTT-AACC--AGAT-CG-ACGTAAAATGACAC-G-AATATCTTT--AAAAC-T-AATTTGAT--ATAGTT-CTGTTCCAACGGT--ATTATGAT-AT-AT-T-GTATTG-A-TTTTTGTCTAATTGCACTT---T-GG--TGAAACTGTTGTAAATTATATCAA-----T-AAGTTG-ATT------TAAATAA-TTTATAAACTTTGC-----AAATATT-GATGTTAATT-C--ATAA--ATAC-----TTGG--CTA-TA--GTA---A--ATT-AAATTAAAA-AAAAAA--------------------A-AAAATCGT-TATA-TATCAGTAGTTACAAAA--TG-G-AAA-T-ACCAATATTTCACCACCAA-----TATAT--TTTAtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|3 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaGCTTGGATA-CTGG-TTAGAAAAGAAAACTGCCCAATATTATAGTCCTC--TT---AAC-TG-TCTATA-GA-CA--GG---TA-----AACTGGCTCTAAG--ATA-AGCTCATGTT-CA-TT-TGTCCTTGGgggataagcttggatactggttagaaaagaaaactgcccaatattatagtcctcttaactgtctatagacaggtaaactggctctaagataagctcatgttcatttgtccttgggttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : cgtccaggaattattcaaactcattaaatgattaattccatacgactgaagattactggaaaccctcagataaactgccccagaatctcttcgaaataaaagctgtgtagtatatgatccatataacttgtcatcttatagaattacagtcataatccaagaacaacgttcagattttagtccaaacataataatccacacacttgtcagttccgtcctattttttatgcatagttcagaactctgagtgcgccgatacaaagtcgtgaaatcacatttgtcgcagtctcttcataattctgatgtcacgtcgacccgcaatgcgcaaggtaaggataataagactaatgtgcaattcttcatttcacaaagttgataaacatcccattttgctaatctacatgactccacgaagaaaagagctggcaacactctgaaaaagaaataagaattgaaaataatacaatgatattaatttataacaaagcttataacaatattatgggctatgatgcaacatttgtcgggggtccaaatattttaacatacggagtgtttatatatagtcattaaaacaacagaggagatgaatgcgatctcacagaatttcaatacaataataaatccaaccaagaaataattgagtaagaggtcccaactctacattttacttccattgcaaaaatggactcggtgtaggacgcgccgcaccgagggcctttcgtcccggggtcctcgttctgcacaaaaatcataatctcaaaaatattcgtcgaggcttgatctaatacttcgaagacgcgacagagtcctagtaatgagaaacattagcttcgacgatctcggaagaaaatcaagaaggcgaccatggccgtcgctgagattaataaaaaatatccagtctcatggcaacggttaaatctaggataaacatctgtttttttttttaaaaaacagtaaaatgactgtaaaattaactttatcttattcgcctatcgaacagccaagcttactagtctaggatccaattgctttgatccactagactgtcatttctacagcaatcaaaggccgcaattcctgtaatgctgtccaataaacgcgcgaccatgcattgcacagtggttatcggtattgaacgcagaaagcacctcgatgcgttttttaaccagatcgacgtaaaatgacacgaatatctttaaaactaatttgatatagttctgttccaacggtattatgatatattgtattgatttttgtctaattgcactttggtgaaactgttgtaaattatatcaataagttgatttaaataatttataaactttgcaaatattgatgttaattcataaatacttggctatagtaaattaaattaaaaaaaaaaaaaaatcgttatatatcagtagttacaaaatggaaataccaatatttcaccaccaatatattttagggataaAGAAGCTTGTTCCAACACTCA--TAA-TG-ATT----AA-TTCCA-AC-ACATTGAAA-TTGAT-G-AACACC--AGATAATCTGC---AGAAATTCT-TTCGAA-TTA--AT--AAAGCTGTAGTTATTATAT---TC-AGTTCA-CTTGT--TC--AATA--ATTACAGG-----T---ATATTCCCAAC-AACCGTTAGG----TTTA-TCCA--AATA-----A--ATC---ACA-TT----CGGTT-CCGTCC-ATT--CTT-T--TTGCAAGTTC-CAAACT---AGTGC--------------AT-CA-AAAGT--TGAAA-CATACATT--TGTTCCGCAG---CTTCATTA-TTCTGATT-CAC-TCGGCCCGAAAGAGT-TAA----AGGA--A-T---AAGAACTATGGTGCA-------AGTTCCTCTCAT----T----TTCACA--A-G-TTGATAACACATGCC-CATTTATGGATA-ATCTAC--ATGACTTCCACGTAA-GAAAAG-AGCC-CTAGGCCAAACTCTTGAAAAAAGA-AATAA-AATTGAAAATAATCACA--T-GGTTATAAT--TAATTTAT---AACAA--GTTATA---------AACAAT----ATTAATGGT-ATG-GTG-CAGAAATGCAACATTTT---GGGGTCCATAAAT--ATTTT--ACAT-CGGAGT--GGTTATATA----TA----TCTTAAAACAAC-AGAG--GATGGAATGCGATATCTCACAGAA-TTAAATAAA-TT--AA-AAATC-AACA-C--AAA--A-TAACCTT--GAG---TA---------------AGGATCC--ACACTACTAACAATTTTAC-AT--CAGTTTC--AAA-TGGA-TCG-T-GT-GG--AGCC-G-GTTCCG-C-CGAGGG-CCATTCGTCC--GGGTCCTCGTCATTA-GCAC--AAAAA-TCATTAATC-TCAAAAAAATATTCGTCGAGGCTTGATAATATACTT-GAAGAC-GTGTCCGACA-AGTCCA-GT-A--ATGAATAT--A-GCTTCGA-CG-AAT--TCGGAAG-A---AC-TCAGAAGG--CGACATCGCGTCAA-----AACAA--TT-TCG-TGAGAT----------------CAGTCT-ATGAA-TACACAGT-AA--AAT-A--CT-TACT----T-A--AC---A--TCTGGATATCC-TCTATAG-AA-AGC--AGACCT-AC--ATATAG-ATC-AAATATT-CTT-G-TCGCACTGGATGACTGTCAT-TT-T--ACA-GCAATTCA-AAGC-GCAA-T-CCTG-AAT-C-TGTC--A-AAACGCGCGCCAAT----GCTATGCAC-AG-AGTTA--T-GTC-TTTT---TAA-TT-TGAAT-TGACGCAATAACACACGC-CG--TGCTTTTTTTTTAAACCCGCGATCCGCAC-TAAA-TGACAA-G-AATATCTTTC-AAAACTT-AATT-GAA-TATG--TTCTG-TCCAACGGT--ATTATGAT-AT-AC-T-GTATTG-A-TTTGC--CTA-ATTCATTT--CT-GGTTTTGAA-------AAATTAT---AA-----TCAAGTTG-ATTTTTTTATAAATAATTTTA--AAC-TTGC------AATATG-TATGTTAATT-C--ATAA--ATAC-----TT-----T--TA--GTA---A------------------------------------------------------ATA-CAT--GTAG-TACAAAATTTTCACAAA-T-A--AA-ATTTCA-CAA--------TATAT--TGTAgttaaccctagacaggaaatccagatgacttttttgttgcacatatagcgtgtttaattcaacaagtcctgaaaaagcgaatataatgtcctgcattgtccttgtatataatatcatgtgtgagactataaggaaatttgagggacttattaactttagttattgtcaattcagtaagtgcctgaaaaacaaaagaaagtcctgtaaaaccatctgcgatgtgtatgtgggaatttgcaggaacattgtgagctctcaaagtcctagcaaagtccaacttaattcgttactggattatttaatggaacacaatgcaatgcaataagaatctgagatttccacttcatctaggacagaggagagttggactggaaaaggaagtctcagtgacttacagggaatataccttcaaatattcaaagaagtggatttatttttgagggg
gi|4 : aGCTTGGA-A--TG--TTAGAAAA----ACTGC-AAATA--AT----CTC--CTTTAAACGTG-CCAAAG-AA------------------ACTG---CTAAA--ATA-AGC--A-GTTACA-TT-TTTCCTTGGagcttggaatgttagaaaaactgcaaataatctcctttaaacgtgccaaagaaactgctaaaataagcagttacatttttccttgggttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : aagaagcttgttccaacactcataatgattaattccaacacattgaaattgatgaacaccagataatctgcagaaattctttcgaattaataaagctgtagttattatattcagttcacttgttcaataattacaggtatattcccaacaaccgttaggtttatccaaataaatcacattcggttccgtccattctttttgcaagttccaaactagtgcatcaaaagttgaaacatacatttgttccgcagcttcattattctgattcactcggcccgaaagagttaaaggaataagaactatggtgcaagttcctctcattttcacaagttgataacacatgcccatttatggataatctacatgacttccacgtaagaaaagagccctaggccaaactcttgaaaaaagaaataaaattgaaaataatcacatggttataattaatttataacaagttataaacaatattaatggtatggtgcagaaatgcaacattttggggtccataaatattttacatcggagtggttatatatatcttaaaacaacagaggatggaatgcgatatctcacagaattaaataaattaaaaatcaacacaaaataaccttgagtaaggatccacactactaacaattttacatcagtttcaaatggatcgtgtggagccggttccgccgagggccattcgtccgggtcctcgtcattagcacaaaaatcattaatctcaaaaaaatattcgtcgaggcttgataatatacttgaagacgtgtccgacaagtccagtaatgaatatagcttcgacgaattcggaagaactcagaaggcgacatcgcgtcaaaacaatttcgtgagatcagtctatgaatacacagtaaaatacttacttaacatctggatatcctctatagaaagcagacctacatatagatcaaatattcttgtcgcactggatgactgtcattttacagcaattcaaagcgcaatcctgaatctgtcaaaacgcgcgccaatgctatgcacagagttatgtctttttaatttgaattgacgcaataacacacgccgtgctttttttttaaacccgcgatccgcactaaatgacaagaatatctttcaaaacttaattgaatatgttctgtccaacggtattatgatatactgtattgatttgcctaattcatttctggttttgaaaaattataatcaagttgatttttttataaataattttaaacttgcaatatgtatgttaattcataaatacttttagtaaatacatgtagtacaaaattttcacaaataaaatttcacaatatattgtaa----T--TAAAACAA--AGAG--GATG-A-TGCGAT-CCTCGCAGAA-TTAAATAAA-TTTAAA-AAATCAAA-A-C--AAA--AATAA--TT--GAG---TA-------------A-AAGATCCAAATCGTAC-----ATTTTAC-ATTCCA-TTTC--AAA-AGGACTTGGT-GTAGG--AGCC-GCG--CCG-A-CGAGGGCCC-TTCGTCCC-GGGTCC-CGTC-TT--GCACCAAAAAA-TCATTAATC-TCAAAAA--TATTCGTCGAGGCTTGATCTAATAATTCGAAGACGG----CGACA-AGTCCAAGT-ATG--AAATATTAA-GCTTCGAGCGAAATCTTCGGAAG-A---AACTCAAGAAG---G-------CCCCA-----AACAAAATC-TCGCTGAGAT---TAAAAAATCAAT-CAGTCT-ATGAAATACGCAGT-AA--AAT-A--CT-TACTCATAT-A--AC---A--TCTGGATATCC-TCTATAGAAACAGC--AG--CT-AC--ATATAG-ATC-AA---TT-C-TTG-T--CACTGA--GACTGTCAT-TT-T--ACAGGCAATCAATAGGC-GCAA-T-CCTG-AAT-C-TGTC----AAACG-GCGTCCAT----GCT-TGCACAAG-AGTT-ATCGGTC-CTTT---TTA----TGAAT-TGACGC-ATAACACAC-C-CGAATGC--TTTTTTTGAA-C--CGAT-C---C-TAAA-TGACAC-G-AATATCTTTC--AAAC-TAAATT-GA--TATAG-TTCTGTTCCAACGGT--ATTATGAT-AT-ATATGGTATTG-A-TTTTG--CTA-TTGCATTT--CTGGG--TT--G-------AAATTATA--AA-----TCAAGTTG-ATT------TAAATAA-TTTA--AACTTTGCA----AAATATGTTATGTAAT-T-C--AT----ATAC-----TT-T--CT--TA--GTA---A--A-TCAAAAAAAAA-AAAAAA--------------------A-AAAATC-T-TATA-AAT--GTAGTTACAAAATTT----AAA-TAA--AA-ATTTCA-CAA--------TATAT--gttaccctgtacagaaagttccaagactttgttgcaaacatataactcttttatcaacaagtctgaaaacaaaaagccatataatgtctgcattgtcctgatatatcatgtgtgaagacttttaggaaatttgagggacttaataactttttatttcaattcagtaagtctgaaaacaaaaagaaaagcctgtaaaaaaaccaatcatggcaagtggtcagtgggatttgcgcaggcatttgagtcctaacaagttctaaaagtcaccttaaatggttactactggcagatttaaggacaaatgcaggaataagagtactgaatatcccactgcaattaggcacagggagaaagtgggaactggaaaaggaagtctcaggacttcaggatatcctgtcaaatattcaagaaagtggcgattaatttggagggg
gi|5 : gGCTTGGA-AACTG--TTAGAAA------CTGCCAAATA--AT----CTC--TT---AAC-T--CCAAAGAAA-CT--GCC--T-----------------AA--ATA-AGC--A-GTT-CA--T-TTTCCTTGGgtaaggcttggaaactgttagaaactgccaaataatctcttaactccaaagaaactgcctaaataagcagttcattttccttggtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|6 : gttaaaacaaagaggatgatgcgatcctcgcagaattaaataaatttaaaaaatcaaaacaaaaataattgagtaaaagatccaaatcgtacattttacattccatttcaaaaggacttggtgtaggagccgcgccgacgagggcccttcgtcccgggtcccgtcttgcaccaaaaaatcattaatctcaaaaatattcgtcgaggcttgatctaataattcgaagacggcgacaagtccaagtatgaaatattaagcttcgagcgaaatcttcggaagaaactcaagaaggccccaaacaaaatctcgctgagattaaaaaatcaatcagtctatgaaatacgcagtaaaatacttactcatataacatctggatatcctctatagaaacagcagctacatatagatcaattcttgtcactgagactgtcattttacaggcaatcaataggcgcaatcctgaatctgtcaaacggcgtccatgcttgcacaagagttatcggtcctttttatgaattgacgcataacacacccgaatgctttttttgaaccgatcctaaatgacacgaatatctttcaaactaaattgatatagttctgttccaacggtattatgatatatatggtattgattttgctattgcatttctgggttgaaattataaatcaagttgatttaaataatttaaactttgcaaaatatgttatgtaattcatatactttcttagtaaatcaaaaaaaaaaaaaaaaaaaatcttataaatgtagttacaaaatttaaataaaaatttcacaatatatgtaagTAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTC-ATGGCAG---TTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAATCAATAGGAAAGTCTA-AT--AAT---GGGAAAA----AA-AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-T-ATGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAG-T-AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-G-AAACGC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AAAGCTGTAA--AATATA-ATATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT----AC-AAC-GATAAG----TTT-ATCCACGAATA-----A--ATCCA-ACA-TTATCATGTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtgttaacccacctgtacagaaaagtccaagacttttgttgcaacatatactttatcaataagtcctgaataagcaatatatatgtctgcatttggtcctgaatatatcatgtgtgagacttttaggaaattgaagggacttatacttttttatttcaattcagtaagtcctgaaaacaaaagaaaagtcctgtaaaaaaccatctgcagtggtagtgggaatttggcaggacatttgagtccctaacaagttctacaaaggtcaacttaatttactgggatattttttaaggacaaatgcaggaataagaagtcctgattatcccactgcattagacaggagaagtgggactggaaaaggaagtctcaggacttcgcagggatatccttcaaatattcagaaagtgggattttattttttggaggg
gi|7 : TAGTTTTCCTTTAACCTT-CCTTAGCCTTCCCTTTCTATTCTGGC-AA-GTGATAA-A-TTA-TCA-GAAAATTAAGTCATGTTC-ATGGCAG---TTTTTCTTTACGCCTTACC-AGTTTTCGTTAAGC-----ATGTAC-TG-GAGCAG-TTATTTTCATAGC-GAAAAATGGTATAATGAGA--GAAGAATAAACTTGCTTAG-C-AACTGCTTAGGAA-CTGCTA-GT---ACATTC-CATATA--TGGTAGTGTTCTGATGGATATTCAAGGCAATACAATGAGGCT-TAAACTGGTAGTCAA--CTG-CTAGCAA----GGATTTACAAATTTTCACA-ATTAA---CCCTATTAAAATCAG-GTGTTAAAAGAAT-CTATAGAAATAAGCAAT--ACACTGCTCAATCAATAGGAAAGTCTA-AT--AAT---GGGAAAA----AA-AAAAAAAAAACAACCAAGGAAAATATGAAATT-GTAAATTAAATTATTTA--TCAA-CATTT-TTGTTTCC-TTTCAGACCAACATAA-TTTA--CATTTTTTTCCCCAAAC--AAATTTGGAAAAGAG---AAA--CT-AGTGAA--TGTTGACTAAAAT-T-ATGAAACAAAATTTTCATTTAA--TTCGAGT-TGGTAA-TATATATGGTAATACAATGATA-ACATCC-CAA-TGAACTTCCAGAGAA--TAATTCAAACACTCAG-T-AATG-ATT----AAATTCAA-AC-AC--TGAAAATTGAT-G-AAACGC--AGATAA-CTGC---AGAAATTCT-T-CGAA-T----AT--AAAGCTGTAA--AATATA-ATATC-A-TTCAACTTGT--TTCAAATA--ATAATA-T-----TCCAACATT----AC-AAC-GATAAG----TTT-ATCCACGAATA-----A--ATCCA-ACA-TTATCATGTTT-TCGTGT-ACTCATTTGTATTTCTA-GTCCAtctctacacagacacgacgatcaaagt
gi|8 : TGCACTTGTCCAG--T-TTGCA-AA-GTTAGATAT-TTATTAGGA--CTAAA-TGAAT-TG-AACTGCT----T-----T------TAAAAAATATA--AT-AACTGATAGACTCAGCTTAATAAG-TGAAAC-TGCTAAGAATTAACTGCTTATAATGAA-TTCTTAGCAATTTACAAGTAGTAG-TAAAAA-CCACAA-CTGCTTGAA-A-CTGTTTTAGAAAA----ACTGCCGAAGA--ATAA--CTCAATT---AAC-TC-CCAAAG-AA-CTTGGCC--TA--GC-AACTG---CTAAATGATA-A-C--A-GTT-CATTT-TTTCCTTGGtctctacacagacacgacgatcaaagt
7 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): AGCATTCATTTTTCGCTTCCGGTAACCCTGTAACAGAAAGTCCAAGCTTTTTGTTGCACATATACTTTTTAAATCACTATAGTTCCCTGAAAACAATATAGATGTCCTGCATTGTCTTAAATATATCATGTGTGAGACTTTAGGGAAATTTGAGGGACCTTATAACTTTTTATTTTCAATTCAGTTAAGTCCTGAAAACAAAAGAAAGTCCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTGCAGGACAAATTTGAGTCTACACAGTTTCTACAAAGTCACAACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTTCTGAATTTCCTTGCATTAGGACAGGAGAGATTAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATATGCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG
Unaligned ( gi|11 ): GTGCAAGACTTTTTGTTGCACATACTTTTATCAACAAGTCCTGAAAAGCAATGTAATATGTCCTACATTTTCCTGAATATATCATGTGTGAGACTTTTAGGAAATTTGAGGGACTTATAACTTTTTTTTAATTTCATCAGTAAGGTTCTGAAAACCAAAAGAAAAGTCCTGTAAAGACCTCTGCAGTGAGTAAGTGGGCCATTGTGCGAGGACATTTGAGTAATGTATTTGTCCTACAAGTTCCTAAAGTCACACTATGTTATGGGTATATTAAAGGATCAACTGCACAGGAATAAGAAGTCCTGAACTTATCCCAACTGCTAGGAGAGAGAAGTGGACTGGAAAAAGGAAGTCTGGGACTTCCAGGGATATTTCAAATTTCAACGAAGTGGGATTTATTTTTGGAGG
Unaligned ( gi|12 ): AATAAACGCATTCATTTTTCCTTGGGTAACCCTGTACAGAAAGTCCAAGACTTTTTGTTGCATCATATACTTTTTAATCACAAGTCCTGAAAAGCAATATAATGTCCTGCATTGTCTTAAATATATCATGTTGTGAGACTTTTAGGAATTTGAGGGACTTATAACTTTTTATTTCAATTCAGTAAGTCTCTGAAAACAAAAGAAAGTCCTGGTAGAAAACCATCTGCAGTGGTAGTGGGAATTTGCAGGACATTTGAGTCTACAAGTTCTACAAAGTCACACTTAAATGTTACTGGGGATATTTAAGGACAATGCAGGAATAAGAAGTCATGAATTTCCTATGCATTAGGACAGGAGAGAAGTGGGACTGGAAAAGGAAGTCTCAGGACTTCCAGGGATA
Unaligned ( gi|13 ): GCTTTTAGGACACCTCTGTACAGAAAGTCCAAGACTTTTTGTTGCACATGCTTTTATCAACAAGTCCTGAAAAGCGATGATAATGTCCTGCATTGTCCTGAATATATTCAGCTGTGAGGAACTTTTTAGGAAATTTGAGGACTTTTATTTCATCAGTAAGTCCTGAAAAACAAAAGAAAGTCCTGTAAAACCATCTGCTGTTGTAGTGGGAATTTGCAGGATATTTTGAGTAATTGTATTTTGTCCTACAAGTTGATATTCAAGGGCAAATTGCAGGAATAAGAGCCTGAATTATCCCACTGCTTAGACAGAGAGATAGTGGGACGGAAAAGGAAGTCTTCAGGATTCCAGGGATTATCCTTAAAATATTCAAGAAAGTGGGATAATTTTTTGGCAGGGA
Unaligned ( gi|15 ): AAGACAAAAGAAAATCCTGAAAAAATTAAACGACACATACATTGCCAGTCTGGTTGTTATTCGAAATTATGCAGGAATCCAATATTGATAGTTTCTTCACCAAGTTCCTACAAAGTCCATCATTTAAATGTTACTGTGCGAGTAGTTTTTAAGGACACATTAGTAAGACGAGGGATAAGTATAAGTCCCTGAAAAATAATCTAATGGAGCCACTGCTCAGATCTAGGACAGAGAGAAGTTATGAGGATATGTAGAAATAAAGTGGGAGTCCAGGGACTTCCAGAGCGATATCCTTTCAAAATATTCAGAATGACGAAGTACCTACAGTTGTGGATTTAGATTTTTG
Unaligned ( gi|22 ): ATGTTACTGGGATATTTAAGGAGAATGGCAGAATAAGAAGTCTGAATTATCCACTGCATTAGGACAAGAGACTCAGTGGACTAGGATAAAGGGAAGTTCAGACTTCCAGGGATGATTCCTTCAAATATCAGAAAGTGGGATTTATTTTTGGAGGG
Unaligned ( gi|30 ): GGGATATCCTTCAAATATTCAAGAAAGTGGTATTTATATTTGGAGGG