lowQualScore                  :                    1                                                                 
lowQualScore                  :                 4  2  6       1 4 1   1     33   1    44444   55  3   44             
lowQualScore                  :                 .  .  .       . . .   .     ..   .    .....   ..  .   ..             
lowQualScore                  :                 0  1  6       7 6 6   6     88   6    22222   66  3   11             
consensus                     :              AAT-GCGTAAACTGCCC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
Reference ( gi|18 )           :              AAT-GCTTAGACTGCCC-CGA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
gi|10                         :              AAT-GTGTAAACTGACC-TAT-CTT-ACTTT--ATA-TCAT-----ATA--AA-TCG--AATAAAAATTGCA
gi|8                          :           tatAAT-GCGTAAACTGCCC-CAA-CTT-ACTTTA-ATA-TCAT-----ATA--AA-TCA--AATAttcattc
gi|7                          :           tatAAC-ACTTAAAATGCTC-CAA-CTT-CCTGT--ACA-TTGT-----ATA--AA-ATG--AATAAAAACTGCttactttcatttctta
gi|2                          :         tgtatAAT-GGGTAAA-TGCCC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AACATA--TGTAAAAATTtttcatt
gi|5                          :           tatAAT-ACCTAAACTATCC-CAA-CTC-ACTTT--ACA-TCGT-----ATCT-AA-ATG--AGAAAAAATTACttactttcatcctt
gi|11                         :         tgtatAAT-GCGTAATATGCCC-CAA-CGT-ACTTT--ATA-TTCT-----ATA--AA-ACG--AGAAAACATTACgttcttt
gi|13                         :             tAGT-GCGTAAGCTACCC-TAA-CCT-ACTAT--ATA-ACCT-----ATA--AA-ATG--GGTAAAAGTTGCtttcattcc
gi|27                         :              AAT-GCATAAATTGCCC-CAA-CAT-ACTTT--ATA-TCTT-----ATT--AA-Atttcatttc
gi|9                          :         tttatAATAGCATAAACTGTCA-CAC-CTT-ACTTT--TCA-TCAT-----ACA--AA-ATG--AAGAGAAAT
gi|33                         :     cgcttaatatAT-ACGTAAACTGCCC-CAG-CTT-ACTTT--ACA-Tactt
gi|17                         :             ggtttatgTAAACTGCTC-CAA-CTT-ACTTC--ATA-TCAT-----AGA--AA-ACA--TATAAAAATTGC
gi|12                         :                   cgTAAACTGCCC-CAAACTTGACTTT--ACA-TTGT-----ATAT-AA-ACA--AATAAAAATTGCAtttcatt
gi|3                          :                   tgTATACAGTTC-CAA-CTT-CCTTTGTATA-TTGT-----ATATAAA-ATG--AATAGAAATTACttcattcct
gi|1                          :               tgtaacaAAACTGCCC-CAT-CTT-ACTTT--ATA-TCAT-----ATA--AATACGA-AATAAAAATTGCAtgtcattcc
gi|4                          :              aatacgtaAAACTGCCC-CAA-CT--ACTTT--ACA-ATTT-----ATA--AA-ACA--AATAAAAATTGCAttcatgtcctta
gi|16                         :           ataaatgtgtaAAACTGTCC-CAA-CAT-ACTTT--ATA-TCGC-----ATA--AA-ACG--ttcattcct
gi|19                         : atagcggtttaaaaattgcgtaaACTGCCTGCAA-CTT-ACTTC--ATA-TCGT-----ATA--AA-ACG--AATAACAATTGCA
gi|23                         :                       aACTGTCC-AGA-TTT-ACTTT--ATA-TTGC-----ATA--AA-ACGTTTCTAAGAATTGCttcatt
gi|20                         :                         aTGCCC-CAA-CAT-ACTTT--ATA-TTGT-----ATA--AA-ATA--AATAAAAATTACt
gi|6                          :                          TACCC-CAA-CAT-ACTTT--ATA-TCATCACATATA--AA-ACA--AATAAAAATTGCtttcattcct
gi|15                         :                         cagtgC-TGA-CGT-ACTTT--ATACTCGT-----ATG--AA-ATG--AGAAGAAATTACtttcattccttaat
gi|21                         :            tttataaagcataacctgC-CAA-CTT-ATTCT--GTA-TCAT-----ATA--AA-ATG--AGTGGAAATtt
gi|22                         :                               -CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACA--AACTAAAATcactgtcattcttt
gi|29                         :                              gctaA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACA--AAT-AGAATTGCAggtagtcatt
gi|26                         :                                 aA-TTT-ACTTT--ATA-TCAT-----ATA--AA-ACG--AATAAAttcat
9 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|14 ): TATAATGCGTAAACTATGCCAAATTTACTGTGTATCGAATAAAATGAGGAAAAGTATCTTCCA
Unaligned ( gi|24 ): CACAAAGCGTATATAGGAATTTCACAAACTACAATTTATACACTCAGT
Unaligned ( gi|25 ): AGAGCATTCTGTAGCTAACCACTGCATGAACTATTTTAGAACATAAC
Unaligned ( gi|28 ): TTATATTGTATAAAGAGAACAAAAATTACTTTCATTCCTTAAT
Unaligned ( gi|30 ): CGCGAAATTATATTATAAATTATCTAAACTTATAAAGCTAAT
Unaligned ( gi|31 ): GCGAAGCGTTTTACAAAAATGCGTAAACTGTTGGATCATACT
Unaligned ( gi|32 ): ACCGTGAGACTATATATAGATATCAACAATAAAAGTTATT
Unaligned ( gi|34 ): TCGAAATGAAAATTGATATAAAAATAACAGATTAATT
Unaligned ( gi|35 ): AAACAGCAAACTTTTAATTATTCTGGAATAAAA






Alignments
lowQualScore                  :               2       66    1  1   1   1     33   1    33333   55  3   33             
lowQualScore                  :               .       ..    .  .   .   .     ..   .    .....   ..  .   ..             
lowQualScore                  :               4       11    7  5   5   5     55   5    88888   22  1   88             
consensus                     :            AAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
Reference ( family-6132 )     :            AAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
gi|1                          :            AAT-ACGTAAAA-CTGC-CC-CAT-CTT-ACTTT--ATA-TCAT-----ATA--AATACGA-AATAAAAATTGCA
gi|10                         :            AAT-GTGTAAA--CTGA-CC-TAT-CTT-ACTTT--ATA-TCAT-----ATA--AA-TCG--AATAAAAATTGCAttcatgtcctta
gi|11                         :         tatAAT-GCGTAAT--ATGC-CC-CAA-CGT-ACTTT--ATA-TTCT-----ATA--AA-ACG--AGAAAACATTACttcattc
gi|12                         :                 tGTAAA--CTGC-CC-CAAACTTGACTTT--ACA-TTGT-----ATAT-AA-ACA--AATAAAAATTGCAtttcattcc
gi|13                         :           tAGT-GCGTAAG--CTAC-CC-TAA-CCT-ACTAT--ATA-ACCT-----ATA--AA-ATG--GGTAAAAGTTGCttcattcct
gi|14                         :            AAT-GCGTAAA--CTATGCC-AAA-TTT-ACTGT--GTA-TCGA-----ATA--AA-ATG--AGGAAAAGTtttcatttc
gi|15                         :         tatAAA-GCATAAC--CTGC-T---GA-CGT-ACTTT--ATACTCGT-----ATG--AA-ATG--AGAAGAAATTACatcttcca
gi|16                         :         tttatT-GCGTAAAAACTGT-CC-CAA-CAT-ACTTT--ATA-TCGC-----ATA--AA-ACG--tt
gi|17                         : atagcggtttaaaaatCGTAAA--CTGC-TC-CAA-CTT-ACTTC--ATA-TCAT-----AGA--AA-ACA--TATAAAAATTGC
gi|18                         :            AAT-GCTTAGA--CTGC-CC-CGA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCAtttcatt
gi|19                         :                     AA--CTGC-CTGCAA-CTT-ACTTC--ATA-TCGT-----ATA--AA-ACG--AATAACAATTGCA
gi|2                          :            AAT-GGGTAAA---TGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AACATA--TGTAAAAATTttcatt
gi|20                         :                       tatTGC-CC-CAA-CAT-ACTTT--ATA-TTGT-----ATA--AA-ATA--AATAAAAATTACttactttcatcctt
gi|21                         :                               C-CAA-CTT-ATTCT--GTA-TCAT-----ATA--AA-ATG--AGTGGAAATtttcattcct
gi|22                         :                                -CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACA--AACTAAAATcactgtcattcttt
gi|23                         :                 gctaAA--CTGT-CC-AGA-TTT-ACTTT--ATA-TTGC-----ATA--AA-ACGTTTCTAAGAATTGCggtagtcatt
gi|26                         :              T-GCGTAAA--GTAC-AC-ATA-TTT-ACTTT--ATA-TCAT-----ATA--AA-ACG--AATAAAt
gi|27                         :            AAT-GCATAAA--TTGC-CC-CAA-CAT-ACTTT--ATA-TCTT-----ATT--AA-A
gi|29                         :                             tttatAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACA--AAT-AGAATTGCA
gi|3                          :                 CATATA--CAGT-TC-CAA-CTT-CCTTTGTATA-TTGT-----ATATAAA-ATG--AATAGAAATTACttcat
gi|33                         :        tgtaaAT-ACGTAAA--CTGC-CC-CAG-CTT-ACTTT--ACA-Ttgtcattcc
gi|4                          :    ggtttatgAAT-GTGTAAAA-CTGC-CC-CAA-CT--ACTTT--ACA-ATTT-----ATA--AA-ACA--AATAAAAATTGCA
gi|5                          :         ataAAT-ACCTAAA--CTAT-CC-CAA-CTC-ACTTT--ACA-TCGT-----ATCT-AA-ATG--AGAAAAAATTACttcattcct
gi|6                          :                     tgtatTAC-CC-CAA-CAT-ACTTT--ATA-TCATCACATATA--AA-ACA--AATAAAAATTGCgttcttt
gi|7                          :       cagtgAAC-ACTTAAA--ATGC-TC-CAA-CTT-CCTGT--ACA-TTGT-----ATA--AA-ATG--AATAAAAACTGCtttcattccttaat
gi|8                          :       tgtatAAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTTA-ATA-TCAT-----ATA--AA-TCA--AATAtttcatt
gi|9                          :         tatAATAGCATAAA--CTGT-CA-CAC-CTT-ACTTT--TCA-TCAT-----ACA--AA-ATG--AAGAGAAATttactttcatttctta
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): CACAAAGCGTATATAGGAATTTCACAAACTACAATTTATACACTCAGT
Unaligned ( gi|25 ): AGAGCATTCTGTAGCTAACCACTGCATGAACTATTTTAGAACATAAC
Unaligned ( gi|28 ): TTATATTGTATAAAGAGAACAAAAATTACTTTCATTCCTTAAT
Unaligned ( gi|30 ): CGCGAAATTATATTATAAATTATCTAAACTTATAAAGCTAAT
Unaligned ( gi|31 ): GCGAAGCGTTTTACAAAAATGCGTAAACTGTTGGATCATACT
Unaligned ( gi|32 ): ACCGTGAGACTATATATAGATATCAACAATAAAAGTTATT
Unaligned ( gi|34 ): TCGAAATGAAAATTGATATAAAAATAACAGATTAATT
Unaligned ( gi|35 ): AAACAGCAAACTTTTAATTATTCTGGAATAAAA






Alignments
lowQualScore                  :               2       66    1  1   1   1     33   1    33333   55  3   33             
lowQualScore                  :               .       ..    .  .   .   .     ..   .    .....   ..  .   ..             
lowQualScore                  :               4       11    7  5   5   5     55   5    88888   22  1   88             
consensus                     :            AAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
Reference ( family-6132 )     :            AAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
gi|1                          :            AAT-ACGTAAAA-CTGC-CC-CAT-CTT-ACTTT--ATA-TCAT-----ATA--AATACGA-AATAAAAATTGCA
gi|10                         :            AAT-GTGTAAA--CTGA-CC-TAT-CTT-ACTTT--ATA-TCAT-----ATA--AA-TCG--AATAAAAATTGCAttcatgtcctta
gi|11                         :         tatAAT-GCGTAAT--ATGC-CC-CAA-CGT-ACTTT--ATA-TTCT-----ATA--AA-ACG--AGAAAACATTACttcattc
gi|12                         :                 tGTAAA--CTGC-CC-CAAACTTGACTTT--ACA-TTGT-----ATAT-AA-ACA--AATAAAAATTGCAtttcattcc
gi|13                         :           tAGT-GCGTAAG--CTAC-CC-TAA-CCT-ACTAT--ATA-ACCT-----ATA--AA-ATG--GGTAAAAGTTGCttcattcct
gi|14                         :            AAT-GCGTAAA--CTATGCC-AAA-TTT-ACTGT--GTA-TCGA-----ATA--AA-ATG--AGGAAAAGTtttcatttc
gi|15                         :         tatAAA-GCATAAC--CTGC-T---GA-CGT-ACTTT--ATACTCGT-----ATG--AA-ATG--AGAAGAAATTACatcttcca
gi|16                         :         tttatT-GCGTAAAAACTGT-CC-CAA-CAT-ACTTT--ATA-TCGC-----ATA--AA-ACG--tt
gi|17                         : atagcggtttaaaaatCGTAAA--CTGC-TC-CAA-CTT-ACTTC--ATA-TCAT-----AGA--AA-ACA--TATAAAAATTGC
gi|18                         :            AAT-GCTTAGA--CTGC-CC-CGA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCAtttcatt
gi|19                         :                     AA--CTGC-CTGCAA-CTT-ACTTC--ATA-TCGT-----ATA--AA-ACG--AATAACAATTGCA
gi|2                          :            AAT-GGGTAAA---TGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AACATA--TGTAAAAATTttcatt
gi|20                         :                       tatTGC-CC-CAA-CAT-ACTTT--ATA-TTGT-----ATA--AA-ATA--AATAAAAATTACttactttcatcctt
gi|21                         :                               C-CAA-CTT-ATTCT--GTA-TCAT-----ATA--AA-ATG--AGTGGAAATtttcattcct
gi|22                         :                                -CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACA--AACTAAAATcactgtcattcttt
gi|23                         :                 gctaAA--CTGT-CC-AGA-TTT-ACTTT--ATA-TTGC-----ATA--AA-ACGTTTCTAAGAATTGCggtagtcatt
gi|26                         :              T-GCGTAAA--GTAC-AC-ATA-TTT-ACTTT--ATA-TCAT-----ATA--AA-ACG--AATAAAt
gi|27                         :            AAT-GCATAAA--TTGC-CC-CAA-CAT-ACTTT--ATA-TCTT-----ATT--AA-A
gi|29                         :                             tttatAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACA--AAT-AGAATTGCA
gi|3                          :                 CATATA--CAGT-TC-CAA-CTT-CCTTTGTATA-TTGT-----ATATAAA-ATG--AATAGAAATTACttcat
gi|33                         :        tgtaaAT-ACGTAAA--CTGC-CC-CAG-CTT-ACTTT--ACA-Ttgtcattcc
gi|4                          :    ggtttatgAAT-GTGTAAAA-CTGC-CC-CAA-CT--ACTTT--ACA-ATTT-----ATA--AA-ACA--AATAAAAATTGCA
gi|5                          :         ataAAT-ACCTAAA--CTAT-CC-CAA-CTC-ACTTT--ACA-TCGT-----ATCT-AA-ATG--AGAAAAAATTACttcattcct
gi|6                          :                     tgtatTAC-CC-CAA-CAT-ACTTT--ATA-TCATCACATATA--AA-ACA--AATAAAAATTGCgttcttt
gi|7                          :       cagtgAAC-ACTTAAA--ATGC-TC-CAA-CTT-CCTGT--ACA-TTGT-----ATA--AA-ATG--AATAAAAACTGCtttcattccttaat
gi|8                          :       tgtatAAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTTA-ATA-TCAT-----ATA--AA-TCA--AATAtttcatt
gi|9                          :         tatAATAGCATAAA--CTGT-CA-CAC-CTT-ACTTT--TCA-TCAT-----ACA--AA-ATG--AAGAGAAATttactttcatttctta


blockSeqs                     :               A       AA    G  G   A   G     GT   C    CACAT   TA  C   TT
blockSeqs                     :               .       A     .  .   .   .     A    .    .       T   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       T   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :               .       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :                       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :                       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :                       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :                       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :                       .     .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :                             .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :                             .  .   .   .     .    .    .       .   .   . 
blockSeqs                     :                                .   .   .     .    .    .       .   .   . 
blockSeqs                     :                                .   .   .     .    .    .       .   .     
blockSeqs                     :                                    .   .     .    .                      


blockSeqCons                  :                       **                                               **
originalCons                  :            AAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
finalCons                     :            AAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): CACAAAGCGTATATAGGAATTTCACAAACTACAATTTATACACTCAGT
Unaligned ( gi|25 ): AGAGCATTCTGTAGCTAACCACTGCATGAACTATTTTAGAACATAAC
Unaligned ( gi|28 ): TTATATTGTATAAAGAGAACAAAAATTACTTTCATTCCTTAAT
Unaligned ( gi|30 ): CGCGAAATTATATTATAAATTATCTAAACTTATAAAGCTAAT
Unaligned ( gi|31 ): GCGAAGCGTTTTACAAAAATGCGTAAACTGTTGGATCATACT
Unaligned ( gi|32 ): ACCGTGAGACTATATATAGATATCAACAATAAAAGTTATT
Unaligned ( gi|34 ): TCGAAATGAAAATTGATATAAAAATAACAGATTAATT
Unaligned ( gi|35 ): AAACAGCAAACTTTTAATTATTCTGGAATAAAA






Alignments
lowQualScore                  :               2       66    1  1   1   1     33   1    33333   55  3   33             
lowQualScore                  :               .       ..    .  .   .   .     ..   .    .....   ..  .   ..             
lowQualScore                  :               4       11    7  5   5   5     55   5    88888   22  1   88             
consensus                     :            AAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
Reference ( family-6132 )     :            AAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCA
gi|1                          :            AAT-ACGTAAAA-CTGC-CC-CAT-CTT-ACTTT--ATA-TCAT-----ATA--AATACGA-AATAAAAATTGCA
gi|10                         :            AAT-GTGTAAA--CTGA-CC-TAT-CTT-ACTTT--ATA-TCAT-----ATA--AA-TCG--AATAAAAATTGCAttcatgtcctta
gi|11                         :         tatAAT-GCGTAAT--ATGC-CC-CAA-CGT-ACTTT--ATA-TTCT-----ATA--AA-ACG--AGAAAACATTACttcattc
gi|12                         :                 tGTAAA--CTGC-CC-CAAACTTGACTTT--ACA-TTGT-----ATAT-AA-ACA--AATAAAAATTGCAtttcattcc
gi|13                         :           tAGT-GCGTAAG--CTAC-CC-TAA-CCT-ACTAT--ATA-ACCT-----ATA--AA-ATG--GGTAAAAGTTGCttcattcct
gi|14                         :            AAT-GCGTAAA--CTATGCC-AAA-TTT-ACTGT--GTA-TCGA-----ATA--AA-ATG--AGGAAAAGTtttcatttc
gi|15                         :         tatAAA-GCATAAC--CTGC-T---GA-CGT-ACTTT--ATACTCGT-----ATG--AA-ATG--AGAAGAAATTACatcttcca
gi|16                         :         tttatT-GCGTAAAAACTGT-CC-CAA-CAT-ACTTT--ATA-TCGC-----ATA--AA-ACG--tt
gi|17                         : atagcggtttaaaaatCGTAAA--CTGC-TC-CAA-CTT-ACTTC--ATA-TCAT-----AGA--AA-ACA--TATAAAAATTGC
gi|18                         :            AAT-GCTTAGA--CTGC-CC-CGA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACG--AATAAAAATTGCAtttcatt
gi|19                         :                     AA--CTGC-CTGCAA-CTT-ACTTC--ATA-TCGT-----ATA--AA-ACG--AATAACAATTGCA
gi|2                          :            AAT-GGGTAAA---TGC-CC-CAA-CTT-ACTTT--ATA-TCGT-----ATA--AACATA--TGTAAAAATTttcatt
gi|20                         :                       tatTGC-CC-CAA-CAT-ACTTT--ATA-TTGT-----ATA--AA-ATA--AATAAAAATTACttactttcatcctt
gi|21                         :                               C-CAA-CTT-ATTCT--GTA-TCAT-----ATA--AA-ATG--AGTGGAAATtttcattcct
gi|22                         :                                -CAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACA--AACTAAAATcactgtcattcttt
gi|23                         :                 gctaAA--CTGT-CC-AGA-TTT-ACTTT--ATA-TTGC-----ATA--AA-ACGTTTCTAAGAATTGCggtagtcatt
gi|26                         :              T-GCGTAAA--GTAC-AC-ATA-TTT-ACTTT--ATA-TCAT-----ATA--AA-ACG--AATAAAt
gi|27                         :            AAT-GCATAAA--TTGC-CC-CAA-CAT-ACTTT--ATA-TCTT-----ATT--AA-A
gi|29                         :                             tttatAA-CTT-ACTTT--ATA-TCGT-----ATA--AA-ACA--AAT-AGAATTGCA
gi|3                          :                 CATATA--CAGT-TC-CAA-CTT-CCTTTGTATA-TTGT-----ATATAAA-ATG--AATAGAAATTACttcat
gi|33                         :        tgtaaAT-ACGTAAA--CTGC-CC-CAG-CTT-ACTTT--ACA-Ttgtcattcc
gi|4                          :    ggtttatgAAT-GTGTAAAA-CTGC-CC-CAA-CT--ACTTT--ACA-ATTT-----ATA--AA-ACA--AATAAAAATTGCA
gi|5                          :         ataAAT-ACCTAAA--CTAT-CC-CAA-CTC-ACTTT--ACA-TCGT-----ATCT-AA-ATG--AGAAAAAATTACttcattcct
gi|6                          :                     tgtatTAC-CC-CAA-CAT-ACTTT--ATA-TCATCACATATA--AA-ACA--AATAAAAATTGCgttcttt
gi|7                          :       cagtgAAC-ACTTAAA--ATGC-TC-CAA-CTT-CCTGT--ACA-TTGT-----ATA--AA-ATG--AATAAAAACTGCtttcattccttaat
gi|8                          :       tgtatAAT-GCGTAAA--CTGC-CC-CAA-CTT-ACTTTA-ATA-TCAT-----ATA--AA-TCA--AATAtttcatt
gi|9                          :         tatAATAGCATAAA--CTGT-CA-CAC-CTT-ACTTT--TCA-TCAT-----ACA--AA-ATG--AAGAGAAATttactttcatttctta
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): CACAAAGCGTATATAGGAATTTCACAAACTACAATTTATACACTCAGT
Unaligned ( gi|25 ): AGAGCATTCTGTAGCTAACCACTGCATGAACTATTTTAGAACATAAC
Unaligned ( gi|28 ): TTATATTGTATAAAGAGAACAAAAATTACTTTCATTCCTTAAT
Unaligned ( gi|30 ): CGCGAAATTATATTATAAATTATCTAAACTTATAAAGCTAAT
Unaligned ( gi|31 ): GCGAAGCGTTTTACAAAAATGCGTAAACTGTTGGATCATACT
Unaligned ( gi|32 ): ACCGTGAGACTATATATAGATATCAACAATAAAAGTTATT
Unaligned ( gi|34 ): TCGAAATGAAAATTGATATAAAAATAACAGATTAATT
Unaligned ( gi|35 ): AAACAGCAAACTTTTAATTATTCTGGAATAAAA