lowQualScore : 11111111111111111111111 22222222222222222222222222222 1111111111111111111 2222222222222222222 1111111111111111
lowQualScore : 00000000000000000000000 3333 2 22222222222222222222222222222 3333 4 2 2 4 88888 1111111111111111111 55555555 44 2222222222 77777777 2 2 4444 333 2 22 555555555 2 22 66666666 222 11 3333 3333333 11 1 2222 3333333333 111 4 99999999999999999 11 1 1 222 1 1 4 1 222 1 1 222 77777 1 11 2 1 11 22 1 11 2 1 1 999999999999999999999999 2 1 1 11 22222 1 1 1 11111 1 1 44444 1 11 111 111 222222 11 1 11 22 1 1 3333333 33333 11 11 1 555555555555 11 1 1 1 1 22222222 44444444 1 11 5555555555 22 55555555 1 1 2222 444444444444 11 22 1 55555 22 33 1 11 6666 55 22 55 4 33 55 55555 4 4 55 1 4 1 444444 4 4 666 2222222222222222222 55 4 4 4 7777777777 4 4 4 4 4 4 4 55 4 1 1 222 44444444 1 11 1 0000000000000000 11 4444 11 2 222 1 555555 22 11 22 11 22 333 1 2222 4444444 1 333333 1 1 1 222222 222 22222222222 222 4 1 4 1 4 55 11 11 1 2 1 1 1111 22 22222 1 2 1 11 3333 444 55 2
lowQualScore : 99999999999999999999999 7777 0 22222222222222222222222222222 6 0000 0 0 0 6 6 0 22222 8888888888888888888 22222222 77 8888888888 22222222 0 0 3 2222 2 555 0 4 77 000000000 2 6 0 77 77777777 333 88 0000 5555555 88 3 8888 3333333333 999 7 0 33333333333333333 44 6 6 5 5 666 5 5 0 4 5 2 555 5 5 888 77777 5 2 88 0 5 88 00 3 3 3 33 0 0 3 3 0 000000000000000000000000 0 8 4 0 2 7 3 999 0 00 22222 4 0 99999 3 2 0 3 3 0 22222 0 0 3 44444 0 33 8 111 000 2 888888 22 3 88 00 3 3 7777777 33333 33 88 3 777777777777 88 3 3 2 3 88888888 11111111 3 88 3333333333 77 22222222 5 88 5 3333 3 222222222222 33 77 5 00000 22 55 5 88 2222 55 33 55 0 22 55 6 22222 0 0 55 5 0 5 222222 0 0 6 111 8888888888888888888 55 0 0 0 0000000000 0 0 0 0 0 0 6 0 55 0 5 7 4 4 111 22222222 2 5 88 5 5555555555555555 88 4 0000 88 6 0 4 222 2 5 4 4 777777 44 4 1 6 6 88 00 0 7 7 88 4 4 7 88 3 0 6 555 6 1 4444 6 7 6 3 1 6 4 0000000 2 7 000000 4 3 7 1 5 5 4 7 333333 1 0 333 33333333333 000 4 0 7 0 5 0 55 3 4 55 88 3 3 88 5 2 3 3 7 8 4 3 3 3 9999 00 22222 3 8 5 7 33 44 1111 111 00 4 0
lowQualScore : ....................... .... . ............................. . .... . . . . . . ..... ................... ........ .. .......... ........ . . . .... . ... . . .. ......... . . . .. ........ ... .. .... ....... .. . .... .......... ... . . ................. .. . . . . ... . . . . . . ... . . ... ..... . . .. . . .. .. . . . .. . . . . . ........................ . . . . . . . ... . .. ..... . . ..... . . . . . . ..... . . . ..... . .. . ... ... . ...... .. . .. .. . . ....... ..... .. .. . ............ .. . . . . ........ ........ . .. .......... .. ........ . .. . .... . ............ .. .. . ..... .. .. . .. .... .. .. .. . .. .. . ..... . . .. . . . ...... . . . ... ................... .. . . . .......... . . . . . . . . .. . . . . . ... ........ . . .. . ................ .. . .... .. . . . ... . . . . ...... .. . . . . .. .. . . . .. . . . .. . . . ... . . .... . . . . . . . ....... . . ...... . . . . . . . . ...... . . ... ........... ... . . . . . . .. . . .. .. . . .. . . . . . . . . . . .... .. ..... . . . . .. .. .... ... .. . .
lowQualScore : 77777777777777777777777 3333 0 00000000000000000000000000000 0 5555 0 0 0 0 0 0 00000 0000000000000000000 00000000 55 5555555555 55555555 0 0 0 5555 5 000 0 0 55 000000000 5 0 0 55 00000000 333 33 7777 7777777 33 3 3333 3333333333 777 3 0 33333333333333333 00 7 7 5 5 555 5 0 0 0 5 5 000 5 5 000 00000 0 5 55 0 5 55 77 3 2 2 88 0 0 2 2 0 555555555555555555555555 2 0 0 0 5 0 2 000 0 88 00000 2 0 88888 2 5 0 2 2 0 00000 0 0 2 55555 0 88 8 000 888 5 888888 55 3 33 00 3 3 7777777 33333 77 33 3 000000000000 33 3 3 0 3 77777777 33333333 3 33 5555555555 55 00000000 0 00 0 5555 0 555555555555 00 55 0 00000 00 55 5 55 5555 00 00 00 0 00 00 0 00000 0 0 00 0 0 0 000000 0 0 0 000 0000000000000000000 00 0 0 0 0000000000 0 0 0 0 0 0 0 0 00 0 0 0 0 0 000 55555555 5 5 00 5 5555555555555555 00 0 5555 55 0 0 0 555 5 5 0 0 555555 00 7 0 7 0 33 00 7 3 7 77 0 0 3 33 7 7 7 777 0 0 3333 7 3 7 7 0 7 7 7777777 3 7 333333 7 3 3 0 0 7 0 3 333333 0 7 777 55555555555 000 0 0 0 0 0 0 00 0 0 55 00 0 0 00 0 5 0 0 7 3 7 7 3 3 3333 77 77777 3 7 3 3 33 77 3333 333 55 0 0
consensus : ATGTAACAGGGTTTTAT------GTCG-G-ATG---A---AATAAC--NCAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATGTGATGTGGAATGATGTGGAATAGAAGAAATAATAGCAAACAAAACAAAAAAACCCTGAAATAAA-CAATAACATATAAGTTACATTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTCACAATGCTGAAATTGCTGAATTTATTTATTATCCAATTCAAAGTGAGACAAAAACTCTCCCTATTNTATATACTTTGAATTATTGTCAAAAATCAATAATANATTTACACCTAANCATACACATGACTAAGTGATACTGTATANTTGATCTATGGATAGGATAACATNATACTTCAACTTTTAATGTCAAATATTGAAATCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AA-CATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACTCTTAATATAATTTGTCCGTATAAAACATAACTCTNTATTAAAATCATATTGTGANACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGNAAATTAATAATGCAGTTTTTACAGGAGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAACGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAAATAT-GTCAAN-GTC-AGAACCT-TAAGAC--CCGTCTCCGAGANTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA----CCTAAAA-CAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGG-TTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGAAN--T-AATA-CAA-T--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTCACCTTTTGTTAAAAAATGACTTCCACGTCANNCAAAGGAAGACTTACTCCGANGAACTCTGCAAGCTTAGCGANNCCCTGAAATAGCTGCATAAATATGCTGCAATGGAAATAATTAAAANATGGAAATTAT--ACAAATTCAGGTATTATCTGATAAAAA--TTAAAGAGTGC-TTCGATGTCTCTTTTACCATT--CTTCAACTGACTAGCCATTCTACGTGA-GCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTGTTGGAAAACATAAACTTGCCATCCAACGTGGTTTCGTC-TGGT-CGAGTTGA-TCTTCGTAGATCAACATTGCTTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTC-GCATCTGGCTCTCCGACGTTAGTA-TACTTGGTCGTGACAGATGACAAGCT--CATCTAC-GTGTTACTGGTGCTGGAATCAGGATCATCAGAT-TAACATCTG-AATCTGAT-GAGAGCGTC-TCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGG-GGTACTGTGATCCTCATCCTCAGATATTGTATG--CCTCGGGTATAGGA-ATTCTCCTATATAGCTAACACCATCCGNGTCNTCAGAATCCTCTGTCTGACTTTGGATNGATACTNGATCANNTAACTCAAGTTTGNCTAGTTCCNGCTTTCTCNTCCGACCTNACTCTTGTGNGCTGGNGCTNGGTGCNGGNGAAGAAATCTTGGNTTCCAATGGGNAGAAGCAAATTCC--TGTGAAG-GTTCTGGTTCTNCCTT-CCCATCTTCTCNTTG--ACNTTATANACTGGAAC--NTGG-TGTTAGGCTGTC---CAATGACGATGTAGGGNTTATCCTCCCANTTATC--CTCAATCCTATGCTTNCCTTCGAA--TG--ACNA-TTTTCACCAA-ACTCTGTCACCTTCCTNCAAANCNACTCCCCTTATCTC-G-TGTCGTAGTNAGA-CT---TCTGTTTTCCTTGNNANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGAAATTTA-CGATGTAAGCTGAATTCGATC-AGAATGAAA--TTTNATCNANNCCAAANANCAAATCAGTGGGNAGGTTGGNCTCTCGGCCAAACATCAAANAAAANGGNGAA-AACCT-GTAGTNTCATG-NTTGT--GC-ATTGTA-TG-ATG-ACTAGCGGNCT--T-ATGTAGGCTTTCCAATT-TGNCTATTGTTC
Reference ( gi|2 ) : ATGTAACAGGGTTTTAT------G------ATG---A---AATAAC--TCAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-----------T-------------A---ATAATAGCAAACAAAACGAATAA-CCCTGAAATAAAACAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGGAAATATTACAAACAAGGGAGATAACTCTG---AAGTTTACAATGCTGAA--------------TTA--ATCCAATTCTA--T-AGACAAA--CTCTCCCT-TTATAT-TACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATGCTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCATTTA-ATGTA--AA-CATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAAATGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAA-ATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTATA-CACTATAA--TA-TATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAAATAT-GTCAAA-GT--AAAACCTATAAGGCAGTTGTCTCCAATATTACAA-CTTCTCTACTTCAAAGCTGGACAA-AGA-ATA----CCCAAAA-CAACTCACAAAACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTT----AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGAAA--T-AATA--AA-T--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC--CTTTTG-----AA-TGACTTCCATGTCATTCAAAAGAAGACTTAC-CTGATGAATTCTGCAAACTTAGCAACCTTCT--AATAGCTG-----ATATATCTCAAT-AAAATAATTAAAA----GAAATTATTTACAAATTCAGGAGTTATCTGATAAAAAATTTAAAGAGTGCCTTCGATGTCTCTTTGTCCATTTGCTTCAACTGACTAGCCATTTTAC-TGAAGCAATCAGCTTTCTGCAACCAAT-CAGGCTTCTCTTTT-CTCTGATATTGACACTT--TGTTTTTGGAAAACATAA-CTTTCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATT-CCTGTTTCCA--TCATCGTCATCAT---------CATTG-----TTGATGT--CATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTG-TCGTGACAGATGACAAGCTATCATATATTGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTT-CCTCCAGGTACTCCGCACCATTCTGATCGTCACC-AGTAATGATGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATGCTCCTATATAGCTTACACTATCTGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATCACT--------GT---CCTAGTTCCAGTTTTCTTTTGTGACCTAATTCCTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGA-TCCAATGGGTAAAAGCAAGTTCC--TGTGAAGAATCCTGGTTCTTCCTTGCCCATTTTCTCTTTG-CACCTTGTAGACTGGAAC--TTGGTTATTAGGCTGTC---TAATGATGATGTAGGGGTTATCTTCCCATTTATC--CTTGATCTTATGCTTACCTTCGAAACTG--ACTA-TTTTCACTAACACTCTGTCACCTTCATTCAATACTGCTCCCTTTACCTT-GCTGTCATAGTGAAA-TT---TCTGTTTTCCTTGGGAATTCTTGATGGCTG-TCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGTAATTTATCGATGTACGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAAGTTTGGTTCTCTGCCGAACATCAAATAATAAGGGGAA-AACCT-GTTGAATCATGAATTGT--GCAATTGTA-TGCATGTACTAATGGGTT--T-ATGTAATTTTTCCAATCGTGTTT-TTGTTC
gi|4 : ATGTAACAGGGTTTTAT------GTCGAG-ATG---A---AATAACAAT-AAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATGTGATGTGGAAT-------------AGAAATAATAGCAAACAAAACAAA-AA-CCCTGAAATAAA-TAATAACATATAAGTTACATTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTCACAATGCTGAA--------------TTA--ATCCAAT-CAA--T-AGACAAAAACTCTCC-T-TTCTAT-TACTTTG--------TCAAAAATCA-TAA-ACAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTCA-CTTT--ATATCAAAT---GA---CATGAG---ATA--CTAA---TAAAAATGCAATTATATGTA--AA-CATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTAGATATGGACAACGTACAATACAATTCAGAGGCC-ATGAGAGACTGCAAAT-ATA-AATTACACTCTTAATATA-TTTGTC-GTATAAAACATAACTCTATATTAAAATCATATTGTGATACAAAATATGGT-C-AAATTACTTT-ATAAA-AAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTT--GCTTATTAGAAATTTATATTTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TC-AATAT-GTCAAT-TTC-AAAACC--TAAGA-A--TGTCTCCAA-AATACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATC----CCTAAAA-CAACTCAC-AGACTTTTGGAGG--AAACCAGCAAACTAA-T-AAAC-ACGAGATAA-TGCAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAA-GCAACCAAT------TAGTTCGGGTA--CTTCC
gi|6 : ATGTAACAGGGTTTCAT------GTCGCAGATGTATACGTAATAAC--ACAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-----------TGATGTGGAATAGAA---ATAATAGCAAACAAAACAAAAAAACCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCAA-CAAAGGAGATAACTCTATCTGAGTTTACAATGCTGAAATTGCTGAATTTATTTATTATCCAATTCAAAGTGAGACAAAA-CTCTCCCTATTA-ATATACTTTAAATTATTGTCAAAAATCAATAATAAATTTACACCTAACCATACACATGACTAAGTGATACTGTATATTTGATCTATAGATAAGATAACATGATACTTTAACTTTTAATGTCAAATATTGAAATCATGAAGGAATA--CCATATTTAAAAATGCAATTGTATGTAGGAA-CATATTACCTAATTTTCTAATGCGCGATTAAGGCAGTTCCCATA-TGAAAGA-TGCAGTA-----------------AT-CAATTCAGAGGCCCATGAGAGAC
gi|16 : TGTAACAGGGTTTTATGTCGCAG------ATG---A---AATAAC--
gi|1 : aacTAAG---ATAGTCTGT-----AAATTGC--TTA--TGTA--AAACATA----CCAATCT----A-G-G-GAT---GACAGTCTCCATAATGAAAAA-TGCCGTA-----------------ATA-AATTCAGAG-CCCATGAAGAACTGCAAATTATATAATTACACT-T-AATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCA-ATTGTGAGACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATC-TCTCTGTGCAAATACTGGCAAATTAA--ATGCAGTTTTTACAGGAGTTTTTAC-GTTTAGCTTATTAGAAATTTATA-TTAGAATTAAGTAAATAAACTTTAAACTTACCA-GGAGAAG-TA--AATCTTAATG-TCAAATAT-GTCAAA-GT--AGA-----TAAGAC--TCTTCTCAAA-ATTCAAA-CTTCT--GCT-CAAAGCTGGACAT-AGATATA----CCAAAAA-CAACTCACAGA---CTTGGGAGGAAAACCAGCAAAACAA-TAAA-C-ACGAGAT-A-T-CAAAAA-ACAAAACC-AAT--GAAAATAGATAACT-----AAAC-CCATGG--ACTT--CCA-TATTA-A-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCTATATACTTCAA-CGCAC--GGC--AGGT-AG-TA-----A-TGACT-----ATGG--TTAC--AT-ATC---A-----AAATCTA--GA-TA-CATGTAATTCATA-AT--AC--T-AATA--AAATAAGAATTCCATAATTAAATTGATTTAATTAAATAAATCA--ATAAATTCATTAC-CTTACATTCTCCCCTCACTTTTTG-----AAATGACTTCCATGTCATTCAAAAGAA-ACTTACTCTGATGAAT-CTGCAAACTTAGCAACTCTCT--AATAGCTG-----ATATACTGCAA--AAAA-AATTAAAAA---GAAATTAT--ACAAATTCAGGTATTATCTGATAAAAA--TTAAAGAGTGC-TTCGATGTCTCTTTTACCATT--CTTCAACTGACTAGCCATTCTACGTGA-GCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTGTTGGAAAACATAAACTTGCCATCCAACGTGGTTTCGTC-TGGT-CGAGTTGA-TCTTCGTAGATCAACATTGCTTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTC-GCATCTGGCTCTCCGACGTTAGTA-TACTTGGTCGTGACAGATGACAAGCT--CATCTAC-GTGTTACTGGTGCTGGAATCAGGATCATCAGAT-TAACATCTG-AATCTGAT-GAGAGCGTC-TCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGG-GGTACTGTGATCCTCATCCTCAGATATTGTATG--CCTCGGGTATAGGA-ATTCTCCTATATAGCTAACACTATCTGAATCATCAGAATCCTCTGTCTGACTTTGGATTGATACTTGATCACTTAACTCAAGTTTGCCTAGTTCCAGTTTTCTCT--TGACCTAACTCTTGTGAGCTGGTACTGGG-GCTGGTAA------CTTAGATTCCAATGGGTAAAAGCAAATTCC--TGTGAAGAATCC-GGTTCTTCCTTGCCCATCTTCCCTTTGTCACCTTATAGACTGGAACT-TTGGTTATTAGGCTGTC---TAATGATGATGTA-GGGTTATCTT-CCATTTAT---CTTAATC-TATGCTTACCTTCGAAACTG--ACTACTTTTCACCCA-ACTCTGTCACCTTCTTTC-ATAACG-TCCCTTTACCTT-GCTTTCATAGTGAAATTT---TCTGTTTTCCTT-CGATTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGAAATTTA-CGATGTAAGCTGAATTCGATC-AGAATGAAA--TTTGATCAATGC--AAAATTAAATCAATGGGC-AGTTGGTTTCTCTGCC-AACATCAAATAATAGGGGGGA-AACCT-GTAGAATCATGAATTGT--GCAATTGTA-TG-ATG-AC-AA-GGGTT--A-ATGTA---TTTCCAAT--TGTTTATTGTTC
gi|7 : TTATTAAAAAATTAT---TATAATTA-GTAAATGAATGTTAGAATTGCCAAGGAGAAAAGA--AGTCTTACTA-TCAAATAA-GTCAAT-GT--CAAAT-TCTAAGG-----GTCTCTGAGAATACAA-CCTCTCTACTTCA--TCTGGACAA-AGC-ATG----CCTAAAT-CAACTCA-AAGACTT--GGAAGGAAAACCAACAAACCAA-TAAAAC-ACTAGAT-A-T-CAAAACTTAAAAACC-AATAGGAAACCATACAAGTTC---AACC-CCATGG--AGATCACCATT-TTAAA-CCCTAAGGCAACCAATTACTAGTAGTTCGGGTA-CTCCCTGATACACTTCAA-TGCAC--GGTC-AGGT-AGCTATTTTCA-TGACTGTATCATGGGTTTGC--ATGGTC---ATATATA--TATA--GA-TA-CATGTAATTTATA-ATAAAA--TAAATATCAA-T--GAATTCTATGAATTAATTTATT-TATTAAATAAATTA--ATAAATTCATCggatcgtcagttcctagcatggaaatgagcgtcctattaaatctattctgtcaggcccgttgcccttggaagttagggagtagttctggactttgtattcctgtcatggcatagtatctctaatgatgttgctgcagaagtggctcctgacaagtgcagttttctgtggtagtccataattggcaataaagcttgaaagatagcatctgcagtggtctttgcggtttgattccttgttggcactgccactgcatactttgtgaaagatcagtcaagataaggatattttttaatgtcccttagaagttcagggtcagtatccatgcagaccatttctaatgttggaagtagtaatgtttgacgagctttgtttctggttgtaggcgtcttaaactgatgcacctctcacattggtcaatccagttagaatataccggtgcatcttaggcatagaat
gi|8 : ctaacatAGGAGAAGAGATAGGTCTTA-TGGTCAA-TATTGTCTAATGTCAAGAACCTA--AGAC--CTGTCTCCAAAATTACAAACTTTGCT-CTTCAAATCTGGACAATATG-ATATTTACCCAAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAATTAAAACAACGAGAT-ATT-CAAAAC-TAAAAACCAAATAGGAAACTAGATAACTTTCAAAAACGCCATTGATACTTGACCA-T-TTATAGCCCTAAGGCAACCAAT------TAGTTCGGGTACCCTTCCGATATACTTCAATCGCACGTGGCCGAGGTAAG-TA-----ATTGACT-----ATAGGGTTACATAT-ATCAAAA-----A--TCTACTGAGTAGCATGTAATT-ATACATGAAGACT-AATAATAA-T--GAATTCCATAAATTAATTTATT-AATTAAATAACTCAATATAAATTC
gi|13 : CATCACT---------TCCCCTC--CTTTTATTAAAAA-TGACTTC-ACGTCAAATAAAGGAAGACTTAC-CC-AGGAACT-----AGC---GCGAAATCCTGAAATA-CTGCATAAATATGTTACAATGGAAATAA--AAAACATGGAAATTtttcatttcttctc
gi|3 : CATCATCCGTGTCTTCA---TCCTCTGT--------GGATGGA-AC-GGA-CAGA--------AT---GCTA--TCCTGCTTTCTCATCCAACTTC-TTCTTG-GTGCTGGAG-TTGGTACAGGAGAAGAAATCTTGGT-TCCAGTGGGAAGAAGCAGATTCCGATGTAAAG--TTCTGCATCTACCTT-------CTCTCCT-G--ACTTTATATACTGGAAT--GTCGATGTTAGGCAGTT---CCATGACAATGTAGGGATTATCCTCCCAACGGTC--TGCAATACTATGCTTTCCTTCAAA--TGAAACAA-TT----CTAACACTCTGTCACCAACCTCCAAAGCAACTCCTCTTGTCTT-AATGTCGTAGTTTGA-CT---TCTGTTcagtaaaatttattcctgtaaaaccatatttttaaaaga
gi|12 : CCTATGGGCAGAA-CAAAATCC--GATGGAGTGTTCTGGTTCTGTCTGTTCCATTTTCTCGCTG-AACGATGAACACTGGAACATCTGG--GTTAGGTTGACGCACAAT-CTGA--TAGGGTTCTTCCTCCCACTTATCTGCT--ATCTTGTGCTTCCCGTCGAATGTC--ACCA-CTTTCACCAAGACTCTATCCCCTTCCTGCAAATCTACTCCCCTCATTTCAG--GTCGTAG---GA-TTTGCTCTGTTTCTCTgaatctggctgttttatatggctgtgttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccattatctagtccaaacagcaaatcagtaggaagattgggctcttgaccaaacatcaaggaaaatggtgaatatcctgtggtttcatgtttgttggcattgtgctgatgtactagtggactaataatgtaggctttccaattagacttctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|7 : aATAGTAAGA-CT---TCTTTTCTCCTTGGCAATTCTcttg
gi|3 : ctaacatttattaaaaaattattataattagtaaatgaatgttTTATCTAGTCCAAACAGCAAATCAGTAGGAAGATTGGGCTCTTGACCAAACATCAAGGAAAATGGTGAATATCCT-GTGGTTTCATG-TTTGTTGGC-ATTGTGCTG-ATGTACTAGTGGACTAATAATGTAGGCTTTCCAATcaaataagtcaatgtcaaattctaagggtctctgagaatacaacctctctacttcatctggacaaagcatgcctaaatcaactcaaagacttggaaggaaaaccaacaaaccaataaaacactagatatcaaaacttaaaaaccaataggaaaccatacaagttcaaccccatggagatcaccattttaaaccctaaggcaaccaattactagtagttcgggtactccctgatacacttcaatgcacggtcaggtagctattttcatgactgtatcatgggtttgcatggtcatatatatatagatacatgtaatttataataaaataaatatcaatgaattctatgaattaatttatttattaaataaattaataaattcatc
gi|5 : catcatccgtgtcttcatcctctgtggatggaacggacagaatgctatcctgctttctcatccaacttcttcttggtgctggagttggtacaggagaagaaatcttggttccagtgggaagaagcagattccgatgtaaagttctgcatctaccttctctcctgactttatatactggaatgtcgatgttaggcagttccatgacaatgtagggattatcctcccaacggtctgcaatactatgctttccttcaaatgaaacaattctaacactctgtcaccaacctccaaagcaactcctcttgtcttaatgtcgtagtttgacttctgttgaatctggctgttttatatggctgtgttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccaAACATCATAAAGAAAGGAGAG-AATCTTGTAGTGTTATGTGTGGT--GGTATTGTA-TGTATGGACTAGCGGTCT--T-GTGTGGGCTTTCCAGTT-TGACT-TTATTtagacttctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
5 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|9 ): GATTCTTGGTTGGAACTGCTTATGGGGCAAATTGGTGAAGATGGTCTTGTATATGACAATGAAACATTGAATTCCCCTTTGAAGGCTCCAGAGTCAAAAAAAGTTCCACGCATACTAGCTCCAGGGGTTTGGAAGCTGTGGTAGATACTTACCTGGAAGCGCGTTGATTGTTTGGGGTCTTAAACTTCAGACATCTATTCGCAGCTATCTACCCCATGTGGCAATATCACTCCTCATCTTTTGGCCATAGAACCTGTCCATCACTTAAAGATGTTGTCCTTTCTCTTCCTGGATGTCCCATTTCTATTTGTGAAGATGGTCTAGATCACAGGTACAATGTCCTTTGGAACAACCACTTGGTGATTGTTCGGTCCCATTCATCAACTTGCTGTTAACCTCTTGTGAG
Unaligned ( gi|10 ): TTTCCAGTTCGCTGTTTTAGTCGTGCTGCAGTGTTCCATCATAAAAATAAGTGCCTTGTTGAATCTTTCGGAGATGCCGCTACCCATTGCAAAGTAGGGAGTGGTACGCGATTTTGAAATTCTTGCCTAGCTACAAAATCTGTTGAAGCAGCTTTCTTGTGAAGTGGGATACTTGGTCCGAGTGAATCTTTTCTATGGAGTTCATAGGGAATCACAAAGTTGTTTAAAAATGCATCTGTCGTGGTTTTTTCAGTCTAATCTCTAGTCGGGACAGCTACAATAAACTTGGTAAAGTGGTCCGTCATAACTAAAACATGGTTCGATGTAAGGTAATCCATAGATACAAGT
Unaligned ( gi|11 ): ACCCTTAGATGGTTCTGACGTCTAGTAGTCCATACATTCAAGTTGCAGTGGCTGAGTAGTAGGAATACTGTCTTGCGAAGCACTTTGGTTATTAGGCTTTTTGAACTTCATAACGGTCTTCCCATGTTGCAAGGTCATGACGCATTCTTGGCCAGTAGAATCTGTCCATTACTAGTTCTACAGTTTTCTCTCTACCCGGATGCCCCATCTTATCATGAAGAAATTCCAGTGTGGTAGCTATAACTTCTGAGGAAACAAGTACCTGTTGATGTTCCCTATCC
Unaligned ( gi|14 ): CTCTGTGGATGCCTTACCCATAGGGTAGATACAGGTATCATCTAATCTTTGGGGAACTCTGCTAATCTGACACAGTTCTTTGATGAAATTTACAAGAAAGATGTGTGTCCTG
Unaligned ( gi|15 ): CTGTCATAAGTAGCACATTTTGAATTCCACTTTTTGAAGGCTCCAGAGTAAAATAGTCCATGCATACTAGTTCCAGGGGTTGAGATGTGGTGATACTTACC
Alignments
lowQualScore : 11111111111111111111111111111 1111111111111111111
lowQualScore : 33 2222222 11 99999999999999999999999999999 1 2 11 11 1111111111111111111 4444 22222222 55555555555 11 2 4444 333 2 33 555555555 111 33 22222222 111 11 11111 11 2222 2222 1 1 11 1 77777777777777777 2 11 2 11 1 11 1 22222222222 33333 11 22222 11 22222 11 222222 1 11 11 1 1 2222222 22222 1 22 11 1 333333333333 11 1 1 1 1111 1 2222 11 1 11 11 22 55555 111 1 33 44444 1 1 222 4444 33333 22 2 22 1 2 1 1 11 1 2 2 2 1 11 333333333 22222 11 2 2 1 22 2 2 2 2 2 1 1 2 22 2 88888888888888888 11 2 222 555555 22 1 2 222 2222 333333333 111 11 11 1 333333 1 2222 3333 22222222222 11 2 2 22 1 1 1 1 22 22222222 1 2 3 11 2222 1 2
lowQualScore : 3 77 6666666 44 6 6 33333333333333333333333333333 7 7 3 3 44 44 7 0 7777777777777777777 7 4444 7 7 77777777 55555555555 44 3 1 4444 1 777 3 1 00 222222222 1 555 00 0 44444444 777 33 88888 66 3 3 33 1111 1111 3 0 0 33 3 0 00000000000000000 55 2 2 7 7 3 7 6 6 1 7 1 44 7 7 7 7 7 7 6 1 7 3 7 7 33 0 2 0 0 11 6 8 0 8 0 8 1 11111111111 22222 22 4 1 8 3 0 0 0 8 8 00000 4 99 11 8 0 0 8 8 8 8 8 8 0 33333 8 11 5 8 8 6 8 333333 8 0 33 22 0 0 6666666 55555 0 22 33 0 888888888888 33 0 0 6 0 7777 1 0 3333 33 0 33 44 22 11111 7 6 0 22 0 6 999 1 2 6 0 7 0 3333 00 6 33333 2 2 666 7 3333 22222 6 6 7 7 77 0 77 77 5 0 5 5 88 2 5 2 0 0 0 5 88 888888888 77777 88 0 0 5 77 2 0 0 0 0 0 5 5 0 77 0 3 4 0 0 11 1 6 6 4 1 7 88 7 77777777777777777 6 1 0 1 88 999 3 1 555 1 7 1 11 888888 0 11 1 2 3 0 0 1 111 2 4 1 3 4444 1 1 333333333 777 33 00 0 2 1 333 1 8 1 666666 1 0 6666 0 1 1 88 0000 00000000000 33 2 99999 7 4 0 3 0 77 1 1 22 6 1 11 0 1 2 11 6 2 1 4 1 1 0 0 1 55 11 88888888 0 0 0 00 1 1111 999 3 0 1 3
lowQualScore : . .. ....... .. . . ............................. . . . . .. .. . . ................... . .... . . ........ ........... .. . . .... . ... . . .. ......... . ... .. . ........ ... .. ..... .. . . .. .... .... . . . .. . . ................. .. . . . . . . . . . . . .. . . . . . . . . . . . . .. . . . . .. . . . . . . . ........... ..... .. . . . . . . . . . ..... . .. .. . . . . . . . . . . ..... . .. . . . . . ...... . . .. .. . . ....... ..... . .. .. . ............ .. . . . . .... . . .... .. . .. .. .. ..... . . . .. . . ... . . . . . . .... .. . ..... . . ... . .... ..... . . . . .. . .. .. . . . . .. . . . . . . . .. ......... ..... .. . . . .. . . . . . . . . . .. . . . . . .. . . . . . . .. . ................. . . . . .. ... . . ... . . . .. ...... . .. . . . . . . ... . . . . .... . . ......... ... .. .. . . . ... . . . ...... . . .... . . . .. .... ........... .. . ..... . . . . . .. . . .. . . .. . . . .. . . . . . . . . . .. .. ........ . . . .. . .... ... . . . .
lowQualScore : 2 55 0000000 33 7 7 33333333333333333333333333333 3 3 3 7 77 00 3 7 3333333333333333333 3 7777 3 3 77777777 00000000000 77 7 0 3333 0 333 3 0 33 000000000 0 333 77 7 33333333 555 88 22222 88 2 2 88 2222 2222 2 0 0 22 2 0 00000000000000000 88 5 5 3 3 3 3 7 7 0 3 0 77 3 3 3 3 3 3 7 0 3 3 3 3 22 0 0 8 8 00 0 0 8 0 8 0 0 00000000000 00000 88 6 0 0 8 8 8 6 0 0 00000 4 66 22 0 8 8 0 0 0 0 0 0 8 00000 0 00 0 0 0 0 0 000000 0 0 88 55 0 0 0000000 00000 0 55 88 0 222222222222 88 0 0 5 0 2222 0 0 8888 88 0 88 00 00 77777 3 7 7 00 7 7 777 0 0 7 7 3 7 3333 33 7 77777 0 0 000 3 0000 77777 7 7 3 3 55 0 00 55 0 0 5 5 00 5 5 5 0 0 0 0 55 000000000 55555 00 0 0 0 55 5 0 0 0 0 0 5 5 0 55 0 0 0 7 7 77 0 7 7 0 0 3 33 3 33333333333333333 7 0 7 0 77 000 7 0 000 0 3 0 77 333333 7 33 0 5 0 0 0 0 000 5 2 0 2 8888 0 0 000000000 555 88 88 8 5 0 555 2 8 0 000000 0 0 5555 2 0 0 00 0000 88888888888 88 5 33333 3 0 0 0 0 55 0 0 00 7 0 77 7 0 0 77 7 3 0 0 0 0 0 0 2 00 00 88888888 0 0 0 88 0 2222 222 2 0 0 7
consensus : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTAT-T---------T-------AATA--A---ATAATAGCAAACAAAACAAAAAAACCCTGAAAT-AAACAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGC-GACAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA----------TTA-TTA--ATCCAATTCAA--T-AGACAAAAACTCTCCCT-TTATAT-TACTTTG-----TTGTCAAAAATCAATAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTAACTTT--ATATCAAATATTGA-ATCATGA---GATA--CTA---TTAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATT-AGGCAGTCTCCATAATG-AAAAATGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACA-GAGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----AT-GGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CCTTTTG-----AAATGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-AT--ATATGCTGCAAT-GAAATAATTAAAA----GAAATT--A--TACAAATTCAGGTATTATCTGATAAAAAATTTAAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATCA----ACT-AAGT-TGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-GTTCTGGTTCTNCCT-TGCCCATTTTCTCTTTGC-A-CCTTGTANACTGGAAC-NTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCCGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGANTTG-T--G-CAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
Reference ( family-5803 ) : ATGTAACAGGGTTTTATGTCG--GATG---A---AATAACN-CAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATGTGATGTGGAATGATGTGGAATAGAAGAAATAATAGCAAACAAAACAAAAAAACCCTGAAAT-AAACAATAACATATAAGTTACATTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGC-GACAAGGGAGATAACTCTATCTGAGTTCACAATGCTGAAATTGCTGAATTTATTTATTATCCAATTCAAAGTGAGACAAAAACTCTCCCTATTNTATATACTTTGAATTATTGTCAAAAATCAATAATANATTTACACCTAANCATACACATGACTAAGTGATACTGTATANTTGATCTATGGATAGGATAACATNATACTTCAACTTTTAATGTCAAATATTGAAATCATGA---GATA--CTA---TTAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATT-AGGCAGTCTCCATAATG-AAAAATGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACTCTTAATATAATTTGTCCGTATAAAACATAACTCTNTATTAAAATCATATTGTGANACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGNAAATTAATAATGCAGTTTTTACAGGAGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAACGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AANGTCA-GAACCT-TAAGAC--CCGTCTCCGAGANTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCTAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----AT-GGG-TTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-CAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTCACCTTTTGTTAAAAAATGACTTCCACGTCANNCAAAGGAAGACTTACTCCGANGAACTCTGCAAGCTTAGCGANNCCCTGAAATAGCTGCATAAATATGCTGCAATGGAAATAATTAAAANATGGAAATT--A--TACAAATTCAGGTATTATCTGATAAAAA--TTAAAGAGTG-CTTCGATGTCTCTTTTACCATT--CTTCAACTGACTAGCCATTCTACGTG-AGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTGTTGGAAAACATAAACTTGCCATCCAACGTGGTTTCGT-CTGG-TCGAGTTG-ATCTTCGTAGATCAACATTGCTTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTC-GCATCTGGCTCTCCGACGTTAGTA-TACTTGGTCGTGACAGATGACAAGC--TCATCTA-CGTGTTACTGGTGCTGGAATCAGGATCATCAGAT-TAACATCT-GAATCTGA-TGAGAGCGTC-TCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGG-GGTACTGTGATCCTCATCCTCAGATATTGTATG--CCTCGGGTATAGGA-ATTCTCCTATATAGCTAACACCATCCGNGTCNTCAGAATCCTCTGTCTGACTTTGGATNGATACTNGATCANNTAACTCAAGTTTGNCTAGTTCCNGCTTTCTCNTCCGACCTNACTCTTGTGNGCTGGNGCTNGGTGCNGGNGAAGAAATCTTGGNTTCCAATGGGNAGAAGCAAATTCCTGTG-AAG-GTTCTGGTTCTNCCT-T-CCCATCTTCTCNTTG--A-CNTTATANACTGGAAC-NT--GG-TGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCANTTATCCTCAATCCTATGCTTNCCTTCGAA--TG--ACNA-TTTTCACCAA-ACTCTGTCACCTTCCTNCAAANCNACTCCCCTTATCTC-G-TGTCGTAGTNAGA-CT---TCTGTTT--TCCTTGNNANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGAAATTTA-CGATGTAAGCTGAATTCGATC-AGAATGAAA--TTTNATCNANNCCAAANANCAAATCAGTGGGNAGGTTGGNCTCTCGGCCAAACATCAAANAAAANGGNGAA-AACCT-GTAGTNTCATG-NTTG-T--G-C-ATTGTA-TG-ATG-ACTAGCGGNCT--T-ATGTAGGCTTTCCAATT-TGNCTATTGTTC
gi|1 : TAA---GATAGTCTG---T--AAATTGC--TTATGTA-A--AACATA----CCAATCT----A-G-G-GAT---GACAGTCTCCATAATG-AAAAATGCCGTA-----------------ATA-AATTCAGAG-CCCATGAAGAACTGCAAATTATATAATTACACT--TAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCA-ATTGTGAGACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATC-TCTCTGTGCAAATACTGGCAAATTAA--ATGCAGTTTTTACAGGAGTTTTTAC-GTTTAGCTTATTAGAAATTTATA-TTAGAATTAAGTAAATAAACTTTAAACTTACCA-GGAGAAG-TA--AATCTTAATG-TCAA-ATATGTC-AAAGT-A-GA-----TAAGAC--TCTTCTC-AAAATTCAAA-CTTCT--GCT-CAAAGCTGGACAT-AGATATA-----CCAAAAACAACTCACAG-ACTT--GGGAGGAAAACCAGCAAAACAA-TAAA-C-ACGAGAT-A-T-CAAAAA-ACAAAACC-AAT--GAAAATAGATAACT-----AAAC-CCATGG--ACTT--CCA-TATTA-A-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCTATATACTTCAA-CGCAC--GGC--AGGT-AG-TA-----A-TGACT-----AT-GG--TTAC--AT-ATC---A-----AAATCTA--GA-TA-CATGTAATTCATA-AT----ACT-AAT-A-AAATAAGAATTCCATAATTAAATTGATTTAATTAAATAAATCA--ATAAATTCATTAC-CTTACATTCTCCCCTCACTTTTTG-----AAATGACTTCCATGTCATTCAAAAGAA-ACTTACTCTGATGAA-TCTGCAAACTTAGCAACTCTCT--AATAGCTG-----ATATACTGCAA---AAAAAATTAAAAA---GAAATT--A--TACAAATTCAGGTATTATCTGATAAAAA--TTAAAGAGTG-CTTCGATGTCTCTTTTACCATT--CTTCAACTGACTAGCCATTCTACGTG-AGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTGTTGGAAAACATAAACTTGCCATCCAACGTGGTTTCGT-CTGG-TCGAGTTG-ATCTTCGTAGATCAACATTGCTTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTC-GCATCTGGCTCTCCGACGTTAGTA-TACTTGGTCGTGACAGATGACAAGC--TCATCTA-CGTGTTACTGGTGCTGGAATCAGGATCATCAGAT-TAACATCT-GAATCTGA-TGAGAGCGTC-TCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGG-GGTACTGTGATCCTCATCCTCAGATATTGTATG--CCTCGGGTATAGGA-ATTCTCCTATATAGCTAACACTATCTGAATCATCAGAATCCTCTGTCTGACTTTGGATTGATACTTGATCACTTAACTCAAGTTTGCCTAGTTCCAGTTTTCTCTT--GACCTAACTCTTGTGAGCTGGTACTGGG-GCTGGTAA------CTTAGATTCCAATGGGTAAAAGCAAATTCCTGTG-AAG-AATCCGGTTCTTCCT-TGCCCATCTTCCCTTTGTCA-CCTTATAGACTGGAACTTT--GGTTATTAGGCTGTC---TAAT--GATGATGTAGGG-TTAT-CTTCCATTTAT-CTTAAT-CTATGCTTACCTTCGAAACTG--ACTACTTTTCACCCA-ACTCTGTCACCTTCTTTCATAACG--TCCCTTTACCTT-GCTTTCATAGTGAAATTT---TCTGTTT--TCCTT-CGATTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGAAATTTA-CGATGTAAGCTGAATTCGATC-AGAATGAAA--TTTGATCAATGC--AAAATTAAATCAATGGGCA-GTTGGTTTCTCTGCC-AACATCAAATAATAGGGGGGA-AACCT-GTAGAATCATGAATTG-T--G-CAATTGTA-TG-ATG-ACAA--GGGTT--A-ATGTA---TTTCCAA-T-TGTTTATTGTTC
gi|12 : CCTATGGGCAGAA-CAAAATCCGATG-GAGTGTTCTGGTTCTGTCTGT-TCCATTTTCTCGCTG--AACGATGAACACTGGAAC-ATCTGG--GTTAGGTTGACGCACAATCTGA-----TAGGGTTCTTCCTCCCACTTATCTGCTATCTTGTGCTTCCCGTCGAA--TGTCACCA-CTTTCACCAAGACTCTATCCCCTTCCTGCAAATCTACTCCCCTCATTTC-A-GGTCGTAG---GA-TTTGCTCTGTTT--CTCTggatcgtcagttcctagcatggaaatgagcgtcctattaaatctattctgtcaggcccgttgcccttggaagttagggagtagttctggactttgtattcctgtcatggcatagtatctctaatgatgttgctgcagaagtggctcctgacaagtgcagttttctgtggtagtccataattggcaataaagcttgaaagatagcatctgcagtggtctttgcggtttgattccttgttggcactgccactgcatactttgtgaaagatcagtcaagataaggatattttttaatgtcccttagaagttcagggtcagtatccatgcagaccatttctaatgttggaagtagtaatgtttgacgagctttgtttctggttgtaggcgtcttaaactgatgcacctctcacattggtcaatccagttagaatataccggtgcatcttaggcatagaat
gi|13 : aCATCACT---------TCCCCTC--CTTTTATTAAAAA-TGACTTC-ACGTCAAATAAAGGAAGACTTACCC--AGGAACT-----AGC---GCGAAATCCTGAAATA-CTGCATAAATATGTTACAATGGAAATAA--AAAACATGGAAATTCAG--TA-AAATT----TATT-CCTG-TAAAActtg
gi|16 : TGTAACAGGGTTTTATGTCGCAGATG---A---AATAACccatatttttaaaaga
gi|2 : aacATGTAACAGGGTTTTATG------ATG---A---AATAACT-CAAGTCCTGTTCAGGGTTC-GGGACATCTCCAATTTAT-T-----------------AATA---------ATAGCAAACAAAAC-GAATAACCCTGAAATAAAACAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATA-TACATTATTGATTTACATAGATCATTAGATCAATGGGAAATATTACAAACAAGGGAGATAACTCTG---AAGTTTACAATGCTGAA----------TTA------ATCCAATTCTA--T-AGAC--AAACTCTCCCT-TTATAT-TACT--------TTATCAAAAATC-ATAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATGCTTT-ACTTT--ATATCAA--ATTG--ATCATGA---GATA--CTA---TTAAAAATGCATTTA-ATGTA--AACATA----CCAATCT----ATG-G-GATT-AGGCAGTCTCCATAATGAAAAAATGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAA-ATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGG-TCCAAATTACTTTTATAAATAAATAACTT-ATACACTAT--AAT-ATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACA-GAGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AAAGT-A-AAACCTATAAGGCAGTTGTCTCCAATATTACAA-CTTCTCTACTTCAAAGCTGGACAA-AGA-ATA-----CCCAAAACAACTCACAAAACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTT----AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----AT-GGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--AAT-AAT-A--AAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCT--CCTTTTG------AATGACTTCCATGTCATTCAAAAGAAGACTTAC-CTGATGAATTCTGCAAACTTAGCAACCTTCT--AATAGCTG-AT--ATAT-CT-CAAT-AAAATAATTAAAA----GAAATT--ATTTACAAATTCAGGAGTTATCTGATAAAAAATTTAAAGAGTGCCTTCGATGTCTCTTTGTCCATTTGCTTCAACTGACTAGCCATTTTAC-TGAAGCAATCAGCTTTCTGCAACCAA-TCAGGCTTCTC-TTTTCTCTGATATTGACACT--TTGTTTTTGGAAAACAT-AACTTTCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATT-CCTGTTTCCA--TCATCGTCATC---------ATCATTG-----TTGA--TGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTT-GTCGTGACAGATGACAAGCTATCATATATTGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCC-TTCCTCCAGGTACTCCGCACCATTCTGATCGTCACC-AGTAATGATGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATGCTCCTATATAGCTTACACTATCTGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC-----ACT---GT---CCTAGTTCCAGTTTTCTTTTGTGACCTAATTCCTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGA-TCCAATGGGTAAAAGCAAGTTCCTGTG-AAGAATCCTGGTTCTTCCT-TGCCCATTTTCTCTTTGC-A-CCTTGTAGACTGGAAC-TT--GGTTATTAGGCTGTC---TAAT--GATGATGTAGGGGTTATCTTCCCATTTATCCTTGATCTTATGCTTACCTTCGAAACTG--ACTA-TTTTCACTAACACTCTGTCACCTTCATTCAATACTGCTCCCTTTACCTT-GCTGTCATAGTGAAA-TT---TCTGTTT--TCCTTGGGAATTCTTGATGGCTG-TCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGTAATTTATCGATGTACGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAAGTTTGGTTCTCTGCCGAACATCAAATAATAAGGGGAA-AACCT-GTTGAATCATGAATTG-T--G-CAATTGTA-TGCATGTACTAATGGGTT--T-ATGTAATTTTTCCAATCGTGTTT-TTGTTC
gi|3 : CATCATCCGTGTCTTCA---TCCTCTGT--------GGATGGA-AC-GGA-CAG-------AA---TG-CTA--TCCTGCTTTCTCATCCAACTTC-TTCTTG-GTGCTGGAG-TTGGTACAGGAGAAGAAATCTTGG-TTCCAGTGGGAAGAAGCAGATTCCGATGTAAA-GTTCTGCATCTACCT-T-C------TCTCCT-G--A-CTTTATATACTGGAAT-GTC-GA-TGTTAGGCAGTT---CCAT--GACAATGTAGGGATTATCCTCCCAACGGTCTGCAATACTATGCTTTCCTTCAAA--TGAAACAA-TTCTAAC----ACTCTGTCACCAACCTCCAAAGCAACTCCTCTTGTCTTAA-TGTCGTAGTTTGA-CT---TCTGTTGAATC--TGGCTGTTTTATATGGCTGT
gi|3 : TTATCTAGTCCAAACAGCAAATCAGTAGGAAGATTGGGCTCTTGACCAAACATCAAGGAAAATGGTGAATATCCT-GTGGTTTCATG-TTTG-TTGG-C-ATTGTGCTG-ATGTACTAGTGGACTAATAATGTAGGCTTTCCAATT-AGACTgttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccattatctagtccaaacagcaaatcagtaggaagattgggctcttgaccaaacatcaaggaaaatggtgaatatcctgtggtttcatgtttgttggcattgtgctgatgtactagtggactaataatgtaggctttccaattagacttctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|4 : catcatccgtgtcttcatcctctgtggatggaacggacagaatgctatcctgctttctcatccaacttcttcttggtgctggagttggtacaggagaagaaatcttggttccagtgggaagaagcagattccgatgtaaagttctgcatctaccttctctcctgactttatatactggaatgtcgatgttaggcagttccatgacaatgtagggattatcctcccaacggtctgcaatactatgctttccttcaaatgaaacaattctaacactctgtcaccaacctccaaagcaactcctcttgtcttaatgtcgtagtttgacttctgttgaatctggctgttttatatggctgtgttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccaATGTAACAGGGTTTTATGTCGA-GATG---A---AATAACAATAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATGTGATGTGGAAT-------------AGAAATAATAGCAAACAAAACAAAAA--CCCTGAAAT-AAATAATAACATATAAGTTACATTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGC-GACAAGGGAGATAACTCTATCTGAGTTCACAATGCTGAA--------------TTA--ATCCAAT-CAA--T-AGACAAAAACTCTCCTT--TCTAT-TACTTTG--------TCAAAAATCA-TAA-ACAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTCA-CTTT--ATATCAAAT---GA---CATGA---GATA--CTA---ATAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATT-AGGCAGTCTCCATAATG-AAAAATGCAGTAGATATGGACAACGTACAATACAATTCAGAGGCC-ATGAGAGACTGCAAAT-ATA-AATTACACTCTTAATATA-TTTGTC-GTATAAAACATAACTCTATATTAAAATCATATTGTGATACAAAATATGGT--CAAATTACTTT-ATAAA-AAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACA-GAGTTTTTACAGTT--GCTTATTAGAAATTTATATTTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TC-A-ATATGTC-AATTTCA-AAACC--TAAGA---ATGTCTCC-AAAATACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATC-----CCTAAAACAACTCACA-GACTTTTGGAGG--AAACCAGCAAACTAA-T-AAAC-ACGAGATAA-TGCAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAA-GCAACCAAT------TAGTTCGGGTA--CTTCCtctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|5 : AACATCATAAAGAAAGGAGAG-AATCTTGTAGTGTTATG-TGTGGT--GGT-ATTGTA-TGTATGGACTAGCGGTCT--T-GTGTGGGCTTTCCAGTT-TGACT-TTATT
gi|6 : tcttcccagcagtcatcacgcttgtgcattccgtcaaaggcggccactttgaataacaccctgtctccagtgcactgtgtgaattttagagtcataaagagaattttgccttgattggctaaactttgctgcagtgttggcaatgcagacttgaatcactcttcaaggttctggacatatgctaacaaactcttagtcttttcagcactgcctaacccaaatggtagattATGTAACAGGGTTTCATGTCGCAGATGTATACGTAATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-----------TGATGTGGAATAGAA---ATAATAGCAAACAAAACAAAAAAACCCTGAAAT-AAACAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGC-AACAAAGGAGATAACTCTATCTGAGTTTACAATGCTGAAATTGCTGAATTTATTTATTATCCAATTCAAAGTGAGACAAAA-CTCTCCCTATTA-ATATACTTTAAATTATTGTCAAAAATCAATAATAAATTTACACCTAACCATACACATGACTAAGTGATACTGTATATTTGATCTATAGATAAGATAACATGATACTTTAACTTTTAATGTCAAATATTGAAATCATGAAGGAATA--CCATATTTAAAAATGCAATTGTATGTAGGAACATATTACCTAATTTTCTAATGCGCGATTAAGGCAGTTCCCAT-ATG-AAAGATGCAGTA-----------------AT-CAATTCAGAGGCCCATGAGAGACttaatctggttcaagtttcccagcatagagtgcaaattctgttaaatctctctgtgatgccattacccatagggtgatacgggtcaatctaaactttgagatgcctgctatctgacgcagttctttgatgaatttacaagaaaagtttgtgtcctggtcagaatgaattattttcggaagtccgtaaagggataacgaaaatattaaaagaggcatctgctgtaatctttttttttgtagggacagcaactgcaaatatggtaaaatgatccataatgatcaggataatctgtactacacccttagatggttctgaagtctagtagtccatacatacaagttgcagtggttgagtagtagaaatactgtgttggttattaggctttttgaacttcatagcggtgtgcccatgttgcaatgtcatgacgcattcttggccagtagagtc
gi|7 : TTATTAAAAAATTAT---TATAATTA-GTAAATGAATGTTAGAATTGCCAAGGAGAAAAGA--AGTCTTACTA-TCAA-ATAAGTC-AATGTCA--AATTC-TAAGG-----GTCTCTGAGAATACAA-CCTCTCTACTTCA--TCTGGACAA-AGC-ATG-----CCTAAATCAACTCA-AAGACTT--GGAAGGAAAACCAACAAACCAA-TAAAAC-ACTAGAT-A-T-CAAAACTTAAAAACC-AATAGGAAACCATACAAGTTC---AACC-CCATGG--AGATCACCATT-TTAAA-CCCTAAGGCAACCAATTACTAGTAGTTCGGGTA-CTCCCTGATACACTTCAA-TGCAC--GGTC-AGGT-AGCTATTTTCA-TGACTGTATCAT-GGGTTTGC--ATGGTC---ATATATA--TATA--GA-TA-CATGTAATTTATA-ATAA--AATAAAT-ATCAAT--GAATTCTATGAATTAATTTATT-TATTAAATAAATTA--ATAAATTCATC
gi|8 : ctaacatAGGAGAAGAGATAGGTCTTA-TGGTCAATAT-TGTCTAATGTCAAGAACCT--AAGAC--CTGTCTCCAAAATTACAAACTTTGCT-CTTCAAATCTGGACAATATG-ATATTTACCCAAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAATTAAAACAACGAGAT-ATT-CAAAAC-TAAAAACCAAATAGGAAACTAGATAACTTTCAAAAACGCCATTGATACTTGACCA-T-TTATAGCCCTAAGGCAACCAAT------TAGTTCGGGTACCCTTCCGATATACTTCAATCGCACGTGGCCGAGGTAAG-TA-----ATTGACT-----ATAGGG-TTACATAT-ATCAAAA-----A--TCTACTGAGTAGCATGTAATT-ATACATGAAGACT-AATAA-TAAT--GAATTCCATAAATTAATTTATT-AATTAAATAACTCAATATAAATTC
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GATTCTTGGTTGGAACTGCTTATGGGGCAAATTGGTGAAGATGGTCTTGTATATGACAATGAAACATTGAATTCCCCTTTGAAGGCTCCAGAGTCAAAAAAAGTTCCACGCATACTAGCTCCAGGGGTTTGGAAGCTGTGGTAGATACTTACCTGGAAGCGCGTTGATTGTTTGGGGTCTTAAACTTCAGACATCTATTCGCAGCTATCTACCCCATGTGGCAATATCACTCCTCATCTTTTGGCCATAGAACCTGTCCATCACTTAAAGATGTTGTCCTTTCTCTTCCTGGATGTCCCATTTCTATTTGTGAAGATGGTCTAGATCACAGGTACAATGTCCTTTGGAACAACCACTTGGTGATTGTTCGGTCCCATTCATCAACTTGCTGTTAACCTCTTGTGAG
Unaligned ( gi|10 ): TTTCCAGTTCGCTGTTTTAGTCGTGCTGCAGTGTTCCATCATAAAAATAAGTGCCTTGTTGAATCTTTCGGAGATGCCGCTACCCATTGCAAAGTAGGGAGTGGTACGCGATTTTGAAATTCTTGCCTAGCTACAAAATCTGTTGAAGCAGCTTTCTTGTGAAGTGGGATACTTGGTCCGAGTGAATCTTTTCTATGGAGTTCATAGGGAATCACAAAGTTGTTTAAAAATGCATCTGTCGTGGTTTTTTCAGTCTAATCTCTAGTCGGGACAGCTACAATAAACTTGGTAAAGTGGTCCGTCATAACTAAAACATGGTTCGATGTAAGGTAATCCATAGATACAAGT
Unaligned ( gi|11 ): ACCCTTAGATGGTTCTGACGTCTAGTAGTCCATACATTCAAGTTGCAGTGGCTGAGTAGTAGGAATACTGTCTTGCGAAGCACTTTGGTTATTAGGCTTTTTGAACTTCATAACGGTCTTCCCATGTTGCAAGGTCATGACGCATTCTTGGCCAGTAGAATCTGTCCATTACTAGTTCTACAGTTTTCTCTCTACCCGGATGCCCCATCTTATCATGAAGAAATTCCAGTGTGGTAGCTATAACTTCTGAGGAAACAAGTACCTGTTGATGTTCCCTATCC
Unaligned ( gi|14 ): CTCTGTGGATGCCTTACCCATAGGGTAGATACAGGTATCATCTAATCTTTGGGGAACTCTGCTAATCTGACACAGTTCTTTGATGAAATTTACAAGAAAGATGTGTGTCCTG
Unaligned ( gi|15 ): CTGTCATAAGTAGCACATTTTGAATTCCACTTTTTGAAGGCTCCAGAGTAAAATAGTCCATGCATACTAGTTCCAGGGGTTGAGATGTGGTGATACTTACC
Alignments
lowQualScore : 1111111111111111111111 11111111111111111111
lowQualScore : 2222222 1 2 2222222222222222222222 22 1 1 11 1 00000000000000000000 2222 1 1 444444444444 2 1 2222 222 1 11 11 2222 2 11 4444444 111 11 11111 11 2222 2222 1 1 11 1 77777777777777777 1 2 2 1 11 1 11 1 22222222222 2222 22222 11 22222 11 222222 1 11 11 1 1 2222222 22222 11 1 333333333333 11 1 1 1 1111 1 2222 11 1 11 11 222 11 22 11 1 11 1 11 22 1 222 4444 222222 33333333333 1 11 1 1 1 1 11 1 1 1 1 1 11 333333333 22222 11 1 1 1 11 1 1 1 1 1 1 1 1 11 1 888888888888888 22 1 1 333333 1 111 11 11 11 111 11 11 1 1111 11 11 1 2222 111 1 111 11 1 1 1 11 1 1 1 1 11 11 1 1 11 2222 1 1
lowQualScore : 3 8 6666666 3 3 6666666666666666666666 22 3 3 44 0 3 7 55555555555555555555 7 2222 7 7 6 3 7 3 444444444444 3 3 8888 333 3 88 88 8888 3 88 7777777 777 33 88888 66 3 3 33 1111 1111 3 0 0 33 3 0 00000000000000000 55 2 2 7 7 3 7 7 6 6 7 3 7 7 3 7 7 6 7 3 7 7 33 0 0 0 11 6 8 0 8 0 8 1 11111111111 4444 3 6 8 3 0 0 0 8 8 00000 1 99 11 8 0 0 8 8 8 8 8 8 0 33333 8 11 5 8 8 6 8 333333 8 0 33 22 0 0 6666666 55555 55 33 0 888888888888 33 0 0 6 0 7777 1 0 1111 33 0 33 44 000 88 00 6 0 6 44 2 6 7 0 1 88 6 3 88 22 2 444 7 1111 333333 6 6 7 7 44444444444 5 22 88 5 5 5 5 88 1 5 1 5 5 5 5 88 888888888 77777 88 5 5 5 88 1 5 5 5 5 5 5 5 5 88 5 1 1 0 6 6 3 7 7 7 333333333333333 6 6 55 3 3 7 888888 7 7 1 2 1 0 888 1 99 0 0 3 88 0 1 1 66 22 777 33 00 0 2 1 3333 8 1 22 33 1 0 6666 0 0 1 88 222 999 0 777 33 2 6 1 5 1 5 1 5 88 6 2 2 1 1 1 0 0 0 1 22 00 33 9 0 9 9 00 0 1111 999 3 0 1 0
lowQualScore : . . ....... . . ...................... .. . . .. . . . .................... . .... . . . . . . ............ . . .... ... . .. .. .... . .. ....... ... .. ..... .. . . .. .... .... . . . .. . . ................. .. . . . . . . . . . . . . . . . . . . . . . .. . . . .. . . . . . . . ........... .... . . . . . . . . . ..... . .. .. . . . . . . . . . . ..... . .. . . . . . ...... . . .. .. . . ....... ..... .. .. . ............ .. . . . . .... . . .... .. . .. .. ... .. .. . . . .. . . . . . .. . . .. .. . ... . .... ...... . . . . ........... . .. .. . . . . .. . . . . . . . .. ......... ..... .. . . . .. . . . . . . . . . .. . . . . . . . . . . ............... . . .. . . . ...... . . . . . . ... . .. . . . .. . . . .. .. ... .. .. . . . .... . . .. .. . . .... . . . .. ... ... . ... .. . . . . . . . . .. . . . . . . . . . . .. .. .. . . . . .. . .... ... . . . .
lowQualScore : 2 8 0000000 3 3 7777777777777777777777 77 3 3 77 7 3 3 33333333333333333333 3 7777 3 3 7 3 3 3 333333333333 7 3 3333 333 3 33 33 3333 7 33 7777777 555 88 22222 88 2 2 88 2222 2222 2 0 0 22 2 0 00000000000000000 88 5 5 3 3 3 3 3 7 7 3 7 3 3 7 3 3 7 3 3 3 3 22 0 8 8 00 0 0 8 0 8 0 4 00000000000 6666 2 0 0 8 8 8 6 0 0 00000 0 66 22 0 8 8 0 0 0 0 0 0 8 00000 0 00 0 0 0 0 0 000000 0 0 88 55 0 0 0000000 00000 55 88 0 222222222222 88 0 0 5 0 2222 0 0 8888 88 0 88 00 777 33 77 7 7 7 00 0 7 3 7 0 33 7 3 33 33 0 333 3 7777 777777 7 7 3 3 33333333333 0 00 00 0 5 5 5 00 0 5 0 0 5 5 0 55 000000000 55555 00 5 0 0 55 0 5 0 0 5 5 5 5 5 00 5 0 0 7 7 7 7 3 3 3 333333333333333 7 7 33 3 3 3 333333 3 3 2 5 0 0 000 0 00 8 8 2 88 2 0 0 55 55 555 88 88 8 5 2 0000 8 0 22 88 2 0 5555 2 8 2 00 888 222 0 555 88 5 7 0 5 0 5 0 5 55 7 0 0 0 0 2 2 0 0 2 22 88 88 8 0 0 2 88 2 2222 222 2 0 0 0
consensus : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTATT----T--GAT---------A--AATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA---ATCCAATTCAA--T-AGACAAAAACTCTCCCT-TTATAT-TACT-----TTAT---CAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTAT--GTA----GACATCATACTTTA-CTTT--ATATCAAAT--TG-A-TCATGA---GATA--CTA---TTAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATT-AGGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-AT--ATAT-CTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
Reference ( family-5803 ) : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATT----T--AAT---------A--AATAATAGCAAACAAAACAAAAAAACCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTATTAATCCAATTCAA--T-AGACAAAAACTCTCCCT-TTATAT-TACT-----TTGTTGTCAAAAATCAATAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTAT--GTA----GACATCATACTTTAACTTT--ATATCAAATATTG-AATCATGA---GATA--CTA---TTAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATT-AGGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CCTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-AT--ATATGCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AACT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCCGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGANTTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
gi|1 : TAA---GATAGTCTG---T--AAATTGC--TTATGTA-A--AACATA----CCAATCT----A-G-G-GAT---GACAGTCTCCATAATGAAAAA-TGCCGTA-----------------ATA-AATTCAGAG-CCCATGAAGAACTGCAAATTATATAATTACACT-T-AATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCA-ATTGTGAGACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATC-TCTCTGTGCAAATACTGGCAAATTAA--ATGCAGTTTTTACAGGAGTTTTTAC-GTTTAGCTTATTAGAAATTTATA-TTAGAATTAAGTAAATAAACTTTAAACTTACCA-GGAGAAG-TA--AATCTTAATG-TCAA-ATATGTC-AAAGT-A-GA-----TAAGAC--TCTTCTC-AAAATTCAAA-CTTCT--GCT-CAAAGCTGGACAT-AGATATA-----CCAAAAACAACTCACAG-ACTT--GGGAGGAAAACCAGCAAAACAA-TAAA-C-ACGAGAT-A-T-CAAAAA-ACAAAACC-AAT--GAAAATAGATAACT-----AAAC-CCATGG--ACTT--CCA-TATTA-A-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCTATATACTTCAA-CGCAC--GGC--AGGT-AG-TA-----A-TGACT-----ATGG--TTAC--AT-ATC---A-----AAATCTA--GA-TA-CATGTAATTCATA-AT----ACT-AAT-A-AAATAAGAATTCCATAATTAAATTGATTTAATTAAATAAATCA--ATAAATTCATTAC-CTTACATTCTCCCCTCACTTTT--TGAAA-TGACTTCCATGTCATTCAAAAGAA-ACTTACTCTGATGAA-TCTGCAAACTTAGCAACTCTCT--AATAGCTG-AT--ATA--CTGCAA---AAAAAATTAAAAA---GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A---TT---AAAGAGTGC-TTCGATGTCTCTTTTACCATT--CTTCAACTGACTAGCCATTCTACGTGA-GCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTGTTGGAAAACATAAACTTGCCATCCAACGTGGTTTCGT-CTGG-TCGAGTTG-ATCTTCGTAGATCAACATTGCTTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTC-GCATCTGGCTCTCCGACGTTAGTA-TACTTGGTCGTGACAGATGACAAGC--TCATCTA-CGTGTTACTGGTGCTGGAATCAGGATCATCAGAT-TAACATCT-GAATCTGA-TGAGAGCGTC-TCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGG-GGTACTGTGATCCTCATCCTCAGATATTGTATG--CCTCGGGTATAGGA-ATTCTCCTATATAGCTAACACTATCTGAATCATCAGAATCCTCTGTCTGACTTTGGATTGATACTTGATCACTTAACTCAAGTTTGCCTAGTTCCAGTTTTCTCTT--GACCTAACTCTTGTGAGCTGGTACTGGG-GCTGGTAA------CTTAGATTCCAATGGGTAAAAGCAAATTCCTGTG-AAG-A-ATCCGGTTCTTCCTTGCCCATCTTCCCTTTGTCACCTTATAGACTGGAACTTT-GGTTATTAGGCTGTC---TAAT--GATGATGTAGGG-TTAT-CTTCCATTTATCT-TAAT-CTATGCTTACCTTCGAAACTG--ACTACTTTTCACCCA-ACTCTGTCACCTTCTTTCATAACG--TCCCTTTACCTT-GCTTTCATAGTGAAATTT---TCTGTTT--TCCTT-CGATTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGAAATTTA-CGATGTAAGCTGAATTCGATC-AGAATGAAA--TTTGATCAATGC--AAAATTAAATCAATGGGCA-GTTGGTTTCTCTGCC-AACATCAAATAATAGGGGGGA-AACCT-GTAGAATCATGAATTGT--GCAATTGTA-TG-ATG-ACAA--GGGTT--A-ATGTA---TTTCCAA-T-TGTTTATTGTTC
gi|12 : CCTATGGGCAGAA-CAAAATCCGATG-GAGTG-TTCTGGTTCTGTCTGTTCCATTTTCTCGCTG-AACGATGAACACTGGAACATCTGG--GTTAGGTTGACGCACAATCTGA-----TAGGGTTCTTCCTCCCACTTATCTGCTATCTTGTGCTTCCCGTCGAATGTC--ACCA-CTTTCACCAAGACTCTATCCCCTTCCTGCAAATCTACTCCCCTCATTTCAG--GTCGTAG---GA-TTTGCTCTGTTT--CTCTggatcgtcagttcctagcatggaaatgagcgtcctattaaatctattctgtcaggcccgttgcccttggaagttagggagtagttctggactttgtattcctgtcatggcatagtatctctaatgatgttgctgcagaagtggctcctgacaagtgcagttttctgtggtagtccataattggcaataaagcttgaaagatagcatctgcagtggtctttgcggtttgattccttgttggcactgccactgcatactttgtgaaagatcagtcaagataaggatattttttaatgtcccttagaagttcagggtcagtatccatgcagaccatttctaatgttggaagtagtaatgtttgacgagctttgtttctggttgtaggcgtcttaaactgatgcacctctcacattggtcaatccagttagaatataccggtgcatcttaggcatagaat
gi|13 : aCATCACT---------TCCCCTC-CTTTTATTAAAAATGACTTC-ACGTCAAATAAAGGAAGACTTACCC--AGGAACT-----AGC---GCGAAATCCTGAAATA-CTGCATAAATATGTTACAATGGAAATAA--AAAACATGGAAATTCAGT--A-AAATT----TATT-CCTG-TAAAACCATATTTTTAAAAGActtg
gi|16 : TGTAACAGGGTTTTATGTCGCAGATG---A---AATAAC
gi|2 : aacATGTAACAGGGTTTTATG------ATG---A---AATAACT-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTATT----------------------AATAATAGCAAACAAAACGAATAA-CCCTGAAATAAAACAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGGAAATATTACAAACAAGGGAGATAACTCTG---AAGTTTACAATGCTGAA--------------TTA---ATCCAATTCTA--T-AGACAAA--CTCTCCCT-TTATAT-TACT-----TTAT---CAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTAT--GTA----GACATCATGCTTTA-CTTT--ATATCAAAT--TG-A-TCATGA---GATA--CTA---TTAAAAATGCATTTA-ATGTA--AACATA----CCAATCT----ATG-G-GATT-AGGCAGTCTCCATAATGAAAAAATGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAA-ATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTATA-CACTATAA--TA-TATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AAAGT-A-AAACCTATAAGGCAGTTGTCTCCAATATTACAA-CTTCTCTACTTCAAAGCTGGACAA-AGA-ATA-----CCCAAAACAACTCACAAAACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTT----AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--AAT-AAT-A--AAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-C-TTT--TGAA--TGACTTCCATGTCATTCAAAAGAAGACTTACC-TGATGAATTCTGCAAACTTAGCAACCTTCT--AATAGCTG-AT--ATAT-CT-CAAT-AAAATAATTAAAA----GAAATT--ATTTACAAATTCAGGAGTTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTGTCCATTTGCTTCAACTGACTAGCCATTTTAC-TGAAGCAATCAGCTTTCTGCAACCAAT-CAGGCTTCTCTTTT-CTCTGATATTGACACTT--TGTTTTTGGAAAACATAA-CTTTCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATT-CCTGTTTCCA--TCATCGTCATCAT---------CATTG-----TTGATGT--CATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTG-TCGTGACAGATGACAAGCTATCATATATTGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTT-CCTCCAGGTACTCCGCACCATTCTGATCGTCACCA-GTAATGATGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATGCTCCTATATAGCTTACACTATCTGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----A-CT---G-T--CCTAGTTCCAGTTTTCTTTTGTGACCTAATTCCTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGAT-CCAATGGGTAAAAGCAAGTTCCTGTG-AAG-AATCCTGGTTCTTCCTTGCCCATTTTCTCTTTG-CACCTTGTAGACTGGAACTT--GGTTATTAGGCTGTC---TAAT--GATGATGTAGGGGTTATCTTCCCATTTATCCTTGATCTTATGCTTACCTTCGAAACTG--ACTA-TTTTCACTAACACTCTGTCACCTTCATTCAATACTGCTCCCTTTACCTT-GCTGTCATAGTGAAA-TT---TCTGTTT--TCCTTGGGAATTCTTGATGGCTGT-CTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGTAATTTATCGATGTACGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAAGTTTGGTTCTCTGCCGAACATCAAATAATAAGGGGAA-AACCT-GTTGAATCATGAATTGT--GCAATTGTA-TGCATGTACTAATGGGTT--T-ATGTAATTTTTCCAATCGTGTTT-TTGTTC
gi|3 : CATCATCCGTGTCTTCA---TCCTCTGT--------GGATGGA-AC-GGA-C----AG---AA---TGC-TA--TCCTGCTTTCTCAT-CCAACTTCTTCTTG-GTGCTGGAG-TTGGTACAGGAGAAGAAATCTTGG-TTCCAGTGGGAAGAAGCAGATTCCGATGTAAA-G-TTCTGCATCTACCTT-------CTCTCCT-G--ACTTTATATACTGGAATGTC-GAT-GTTAGGCAGTT---CCAT--GACAATGTAGGGATTATCCTCCCAACGGTCTGCAATACTATGCTTTCCTTCAAA--TGAAACAA-TTCTAAC----ACTCTGTCACCAACCTCCAAAGCAACTCCTCTTGTCTT-AATGTCGTAGTTTGA-CT---TCTGTTGAATC--TGGCTGTTTTATATGGCTGT
gi|3 : TTATCTAGTCCAAACAGCAAATCAGTAGGAAGATTGGGCTCTTGACCAAACATCAAGGAAAATGGTGAATATCCT-GTGGTTTCATG-TTTGTTGGC-ATTGTGCTG-ATGTACTAGTGGACTAATAATGTAGGCTTTCCAATT-AGACT-gttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccattatctagtccaaacagcaaatcagtaggaagattgggctcttgaccaaacatcaaggaaaatggtgaatatcctgtggtttcatgtttgttggcattgtgctgatgtactagtggactaataatgtaggctttccaattagacttctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|4 : catcatccgtgtcttcatcctctgtggatggaacggacagaatgctatcctgctttctcatccaacttcttcttggtgctggagttggtacaggagaagaaatcttggttccagtgggaagaagcagattccgatgtaaagttctgcatctaccttctctcctgactttatatactggaatgtcgatgttaggcagttccatgacaatgtagggattatcctcccaacggtctgcaatactatgctttccttcaaatgaaacaattctaacactctgtcaccaacctccaaagcaactcctcttgtcttaatgtcgtagtttgacttctgttgaatctggctgttttatatggctgtgttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccaATGTAACAGGGTTTTATGTCG-AGATG---A---AATAACAATAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATG----T--GATGTGGAATAGA--AATAATAGCAAACAAAACAAAAA--CCCTGAAATAAA-TAATAACATATAAGTTACATTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTCACAATGCTGAA--------------TTA---ATCCAAT-CAA--T-AGACAAAAACTCTCC-T-TTCTAT-TACT-----TTGT---CAAAAATCA-TAA-ACAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTAT--GTA----GACATCATACTTCA-CTTT--ATATCAAAT---G-A--CATGA---GATA--CTA---ATAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATT-AGGCAGTCTCCATAATGAAAAA-TGCAGTAGATATGGACAACGTACAATACAATTCAGAGGCC-ATGAGAGACTGCAAAT-ATA-AATTACACTCTTAATATA-TTTGTC-GTATAAAACATAACTCTATATTAAAATCATATTGTGATACAAAATATGGT--CAAATTACTTT-ATAAA-AAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTT--GCTTATTAGAAATTTATATTTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TC-A-ATATGTC-AATTTCA-AAACC--TAAGAA---TGTCTCCAAAA-TACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATC-----CCTAAAACAACTCACA-GACTTTTGGAGG--AAACCAGCAAACTAA-T-AAAC-ACGAGATAA-TGCAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAA-GCAACCAAT------TAGTTCGGGTA--CTTCCctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|5 : AACATCATAAAGAAAGGAGAG-AATCTTGTAGTGTTATGTGTGGT--GGTATTGTA-TGTATGGACTAGCGGTCT--T-GTGTGGGCTTTCCAGTT-TGACT-TTATT
gi|6 : tcttcccagcagtcatcacgcttgtgcattccgtcaaaggcggccactttgaataacaccctgtctccagtgcactgtgtgaattttagagtcataaagagaattttgccttgattggctaaactttgctgcagtgttggcaatgcagacttgaatcactcttcaaggttctggacatatgctaacaaactcttagtcttttcagcactgcctaacccaaatggtagattATGTAACAGGGTTTCATGTCGCAGATGTATACGTAATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTATTGATGTGGAAT---------AGAAATAATAGCAAACAAAACAAAAAAACCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATA-TACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCAA-CAAAGGAGATAACTCTATCTGAGTTTACAATGCTGAAATTGCTGAATTTATTTATT-ATCCAATTCAAAGTGAGAC-AAAACTCTCCCTATTA-ATATACTTTAAATTATTGTCAAAAATCAATAATAAATTTACACCTAACCATACACATGACTAAGTGATACTGTATATTTGATCTATAGATAAGATAACATGATACTTTAACTTTTAATGTCAAATATTGAAATCATGAAGGAATA--CCATATTTAAAAATGCAATTGTATGTAGGAACATATTACCTAATTTTCTAATGCGCGATTAAGGCAGTTCCCAT-ATGAAAGA-TGCAGTA-----------------AT-CAATTCAGAGGCCCATGAGAGACttaatctggttcaagtttcccagcatagagtgcaaattctgttaaatctctctgtgatgccattacccatagggtgatacgggtcaatctaaactttgagatgcctgctatctgacgcagttctttgatgaatttacaagaaaagtttgtgtcctggtcagaatgaattattttcggaagtccgtaaagggataacgaaaatattaaaagaggcatctgctgtaatctttttttttgtagggacagcaactgcaaatatggtaaaatgatccataatgatcaggataatctgtactacacccttagatggttctgaagtctagtagtccatacatacaagttgcagtggttgagtagtagaaatactgtgttggttattaggctttttgaacttcatagcggtgtgcccatgttgcaatgtcatgacgcattcttggccagtagagtc
gi|7 : TTATTAAAAAATTAT---TATAATTA-GTAAATGAATGTTAGAATTGCCAAGGAGAAAAGA--AGTCTTACTA-TCAA-ATAAGTC-AATGTCA--AATTC-TAAGG-----GTCTCTGAGAATACAA-CCTCTCTACTTCA--TCTGGACAA-AGC-ATG-----CCTAAATCAACTCA-AAGACTT--GGAAGGAAAACCAACAAACCAA-TAAAAC-ACTAGAT-A-T-CAAAACTTAAAAACC-AATAGGAAACCATACAAGTTC---AACC-CCATGG--AGATCACCATT-TTAAA-CCCTAAGGCAACCAATTACTAGTAGTTCGGGTA-CTCCCTGATACACTTCAA-TGCAC--GGTC-AGGT-AGCTATTTTCA-TGACTGTATCATGGGTTTGC--ATGGTC---ATATATA--TATA--GA-TA-CATGTAATTTATA-ATAA--AATAAAT-ATCAAT--GAATTCTATGAATTAATTTATT-TATTAAATAAATTA--ATAAATTCATC
gi|8 : ctaacatAGGAGAAGAGATAGGTCTTA-TGGTCAATAT-TGTCTAATGTCAAGAACCT--AAGAC--CTGTCTCCAAAATTACAAACTTTGCT-CTTCAAATCTGGACAATATG-ATATTTACCCAAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAATTAAAACAACGAGAT-ATT-CAAAAC-TAAAAACCAAATAGGAAACTAGATAACTTTCAAAAACGCCATTGATACTTGACCA-T-TTATAGCCCTAAGGCAACCAAT------TAGTTCGGGTACCCTTCCGATATACTTCAATCGCACGTGGCCGAGGTAAG-TA-----ATTGACT-----ATAGGGTTACATAT-ATCAAAA-----A--TCTACTGAGTAGCATGTAATT-ATACATGAAGACT-AATAA-TAAT--GAATTCCATAAATTAATTTATT-AATTAAATAACTCAATATAAATTC
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GATTCTTGGTTGGAACTGCTTATGGGGCAAATTGGTGAAGATGGTCTTGTATATGACAATGAAACATTGAATTCCCCTTTGAAGGCTCCAGAGTCAAAAAAAGTTCCACGCATACTAGCTCCAGGGGTTTGGAAGCTGTGGTAGATACTTACCTGGAAGCGCGTTGATTGTTTGGGGTCTTAAACTTCAGACATCTATTCGCAGCTATCTACCCCATGTGGCAATATCACTCCTCATCTTTTGGCCATAGAACCTGTCCATCACTTAAAGATGTTGTCCTTTCTCTTCCTGGATGTCCCATTTCTATTTGTGAAGATGGTCTAGATCACAGGTACAATGTCCTTTGGAACAACCACTTGGTGATTGTTCGGTCCCATTCATCAACTTGCTGTTAACCTCTTGTGAG
Unaligned ( gi|10 ): TTTCCAGTTCGCTGTTTTAGTCGTGCTGCAGTGTTCCATCATAAAAATAAGTGCCTTGTTGAATCTTTCGGAGATGCCGCTACCCATTGCAAAGTAGGGAGTGGTACGCGATTTTGAAATTCTTGCCTAGCTACAAAATCTGTTGAAGCAGCTTTCTTGTGAAGTGGGATACTTGGTCCGAGTGAATCTTTTCTATGGAGTTCATAGGGAATCACAAAGTTGTTTAAAAATGCATCTGTCGTGGTTTTTTCAGTCTAATCTCTAGTCGGGACAGCTACAATAAACTTGGTAAAGTGGTCCGTCATAACTAAAACATGGTTCGATGTAAGGTAATCCATAGATACAAGT
Unaligned ( gi|11 ): ACCCTTAGATGGTTCTGACGTCTAGTAGTCCATACATTCAAGTTGCAGTGGCTGAGTAGTAGGAATACTGTCTTGCGAAGCACTTTGGTTATTAGGCTTTTTGAACTTCATAACGGTCTTCCCATGTTGCAAGGTCATGACGCATTCTTGGCCAGTAGAATCTGTCCATTACTAGTTCTACAGTTTTCTCTCTACCCGGATGCCCCATCTTATCATGAAGAAATTCCAGTGTGGTAGCTATAACTTCTGAGGAAACAAGTACCTGTTGATGTTCCCTATCC
Unaligned ( gi|14 ): CTCTGTGGATGCCTTACCCATAGGGTAGATACAGGTATCATCTAATCTTTGGGGAACTCTGCTAATCTGACACAGTTCTTTGATGAAATTTACAAGAAAGATGTGTGTCCTG
Unaligned ( gi|15 ): CTGTCATAAGTAGCACATTTTGAATTCCACTTTTTGAAGGCTCCAGAGTAAAATAGTCCATGCATACTAGTTCCAGGGGTTGAGATGTGGTGATACTTACC
Alignments
lowQualScore : 1111111111111
lowQualScore : 2222222 1 1 2222222222222 1 1 1 1 2 1 77777777777777 11 2222 22 1 1 44444444 1 1 2222 222 1 11 11 2222 1 11 33333333 111 11 2222 11 2222 2222 1 1 111 1 77777777777777777 1 1 1 1 11 1 11 1 22222222222 2222 22222 11 22222 11 222222 1 11 11 1 1 2222222 22222 11 1 333333333333 11 1 1 1 1111 1 2222 11 1 11 11 1 2222 1 11 1 11 33333 1111 222 4444 222222 33333333333 1 11 1 1 1 1 11 1 1 1 1 1 11 333333333 22222 11 1 1 1 11 1 1 1 1 1 1 1 1 11 1 888888888888888 22 1 1 333333 1 111 11 11 11 111 11 11 1 111 11 11 1 2222 111 1 111 11 1 1 1 11 1 1 1 1 11 11 1 1 11 2222 1 1
lowQualScore : 3 8 6666666 3 3 6666666666666 2 3 3 3 3 0 3 7 88888888888888 88 7 2222 22 6 3 3 7 88888888 3 3 8888 333 3 88 88 8888 3 88 22222222 777 33 0000 66 3 3 33 1111 1111 3 0 0 000 3 0 00000000000000000 55 2 2 7 7 3 7 7 6 6 7 3 6 7 7 3 7 7 6 7 3 7 7 33 0 0 0 11 6 8 0 8 0 8 1 11111111111 4444 3 6 8 3 0 0 0 8 8 00000 1 99 11 8 0 0 8 8 8 8 8 8 0 33333 8 11 5 8 8 6 8 333333 8 0 33 22 0 0 6666666 55555 55 33 0 888888888888 33 0 0 6 0 7777 1 0 1111 33 0 33 44 3 9999 3 6 0 6 44 2 6 7 0 1 88 6 33333 7777 444 7 1111 333333 6 6 7 7 44444444444 5 22 88 5 5 5 5 88 1 5 1 5 5 5 5 88 888888888 77777 88 5 5 5 88 1 5 5 5 5 5 5 5 5 88 5 1 1 0 6 6 3 7 7 7 333333333333333 6 6 55 3 3 7 888888 7 7 1 2 1 0 888 1 99 0 0 3 88 0 1 1 66 22 777 33 00 0 2 1 111 8 1 22 33 1 0 6666 0 0 1 88 222 999 0 777 33 2 6 1 5 1 5 1 5 88 6 2 2 1 1 1 0 0 0 1 22 11 33 9 0 9 9 00 0 1111 999 3 0 1 0
lowQualScore : . . ....... . . ............. . . . . . . . . .............. .. . .... .. . . . . ........ . . .... ... . .. .. .... . .. ........ ... .. .... .. . . .. .... .... . . . ... . . ................. .. . . . . . . . . . . . . . . . . . . . . . . .. . . . .. . . . . . . . ........... .... . . . . . . . . . ..... . .. .. . . . . . . . . . . ..... . .. . . . . . ...... . . .. .. . . ....... ..... .. .. . ............ .. . . . . .... . . .... .. . .. .. . .... . . . . .. . . . . . .. . ..... .... ... . .... ...... . . . . ........... . .. .. . . . . .. . . . . . . . .. ......... ..... .. . . . .. . . . . . . . . . .. . . . . . . . . . . ............... . . .. . . . ...... . . . . . . ... . .. . . . .. . . . .. .. ... .. .. . . . ... . . .. .. . . .... . . . .. ... ... . ... .. . . . . . . . . .. . . . . . . . . . . .. .. .. . . . . .. . .... ... . . . .
lowQualScore : 2 8 0000000 3 3 7777777777777 0 3 3 3 7 7 3 3 33333333333333 33 3 7777 77 7 3 3 3 33333333 3 3 3333 333 3 33 33 3333 3 33 33333333 555 88 8888 88 2 2 88 2222 2222 2 0 0 222 2 0 00000000000000000 88 5 5 3 3 3 3 3 7 7 3 3 7 3 3 3 3 3 7 3 3 3 3 22 0 8 8 00 0 0 8 0 8 0 4 00000000000 6666 2 0 0 8 8 8 6 0 0 00000 0 66 22 0 8 8 0 0 0 0 0 0 8 00000 0 00 0 0 0 0 0 000000 0 0 88 55 0 0 0000000 00000 55 88 0 222222222222 88 0 0 5 0 2222 0 0 8888 88 0 88 00 3 3333 3 7 7 7 00 0 7 3 7 0 33 7 33333 0000 333 3 7777 777777 7 7 3 3 33333333333 0 00 00 0 5 5 5 00 0 5 0 0 5 5 0 55 000000000 55555 00 5 0 0 55 0 5 0 0 5 5 5 5 5 00 5 0 0 7 7 7 7 3 3 3 000000000000000 7 7 33 3 3 3 333333 3 3 2 5 0 0 000 0 00 8 8 2 88 2 0 0 55 55 555 88 88 8 5 2 000 8 0 22 88 2 0 5555 2 8 2 00 888 222 0 555 88 5 7 0 5 0 5 0 5 55 7 0 0 0 0 2 2 0 0 2 22 00 88 8 0 0 2 88 2 2222 222 2 0 0 0
consensus : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTATT-GATGTGGAATAGAAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAA-CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
Reference ( family-5803 ) : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTATTTGAT---------AAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAAACTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
gi|1 : TAAG---ATAGTCTGT-----AAATTGC--TTATGTA-A--AACATA----CCAATCT----A-G-G-GAT---GACAGTCTCCATAATGAAAAA-TGCCGTA-----------------ATA-AATTCAGAG-CCCATGAAGAACTGCAAATTATATAATTACACT-T-AATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCA-ATTGTGAGACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATC-TCTCTGTGCAAATACTGGCAAATTAA--ATGCAGTTTTTACAGGAGTTTTTAC-GTTTAGCTTATTAGAAATTTATA-TTAGAATTAAGTAAATAAACTTTAAACTTACCA-GGAGAAG-TA--AATCTTAATG-TCAA-ATATGTC-AAAGT-A-GA-----TAAGAC--TCTTCTC-AAAATTCAAA-CTTCT--GCT-CAAAGCTGGACAT-AGATATA-----CCAAAAACAACTCACAG-ACTT--GGGAGGAAAACCAGCAAAACAA-TAAA-C-ACGAGAT-A-T-CAAAAA-ACAAAACC-AAT--GAAAATAGATAACT-----AAAC-CCATGG--ACTT--CCA-TATTA-A-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCTATATACTTCAA-CGCAC--GGC--AGGT-AG-TA-----A-TGACT-----ATGG--TTAC--AT-ATC---A-----AAATCTA--GA-TA-CATGTAATTCATA-AT----ACT-AAT-A-AAATAAGAATTCCATAATTAAATTGATTTAATTAAATAAATCA--ATAAATTCATTAC-CTTACATTCTCCCCTCACTTTT--TGAAA-TGACTTCCATGTCATTCAAAAGAA-ACTTACTCTGATGAA-TCTGCAAACTTAGCAACTCTCT--AATAGCTG-----ATATA-CTGCAA---AAAAAATTAAAAA---GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A---TT---AAAGAGTGC-TTCGATGTCTCTTTTACCATT--CTTCAACTGACTAGCCATTCTACGTGA-GCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTGTTGGAAAACATAAACTTGCCATCCAACGTGGTTTCGT-CTGG-TCGAGTTG-ATCTTCGTAGATCAACATTGCTTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTC-GCATCTGGCTCTCCGACGTTAGTA-TACTTGGTCGTGACAGATGACAAGC--TCATCTA-CGTGTTACTGGTGCTGGAATCAGGATCATCAGAT-TAACATCT-GAATCTGA-TGAGAGCGTC-TCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGG-GGTACTGTGATCCTCATCCTCAGATATTGTATG--CCTCGGGTATAGGA-ATTCTCCTATATAGCTAACACTATCTGAATCATCAGAATCCTCTGTCTGACTTTGGATTGATACTTGATCACTTAACTCAAGTTTGCCTAGTTCCAGTTTTCTCTT--GACCTAACTCTTGTGAGCTGGTACTGGG-GCTGGTAA------CTTAGATTCCAATGGGTAAAAGCAAATTCCTGTG-AAG-A-ATCCGGTTCTTCCTTGCCCATCTTCCCTTTGTCACCTTATAGACTGGAACTTT-GGTTATTAGGCTGTC---TAAT--GATGATGTAGGG-TTAT-CTTCCATTTATCT-TAAT-CTATGCTTACCTTCGAAACTG--ACTACTTTTCACCCA-ACTCTGTCACCTTCTTTCATAACG--TCCCTTTACCTT-GCTTTCATAGTGAAATTT---TCTGTTT--TCCTT-CGATTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGAAATTTA-CGATGTAAGCTGAATTCGATC-AGAATGAAA--TTTGATCAATGC--AAAATTAAATCAATGGGCA-GTTGGTTTCTCTGCC-AACATCAAATAATAGGGGGGA-AACCT-GTAGAATCATGAATTGT--GCAATTGTA-TG-ATG-ACAA--GGGTT--A-ATGTA---TTTCCAA-T-TGTTTATTGTTC
gi|12 : CCTATGGGCAGAA-CAAAATCCGATG-GAGTG-TTCTGGTTCTGTCTGTTCCATTTTCTCGCTG-AACGATGAACACTGGAACATCTGG--GTTAGGTTGACGCACAATCTGA-----TAGGGTTCTTCCTCCCACTTATCTGCTATCTTGTGCTTCCCGTCGAATGTC--ACCA-CTTTCACCAAGACTCTATCCCCTTCCTGCAAATCTACTCCCCTCATTTCAG--GTCGTAG---GA-TTTGCTCTGTTT--CTCTggatcgtcagttcctagcatggaaatgagcgtcctattaaatctattctgtcaggcccgttgcccttggaagttagggagtagttctggactttgtattcctgtcatggcatagtatctctaatgatgttgctgcagaagtggctcctgacaagtgcagttttctgtggtagtccataattggcaataaagcttgaaagatagcatctgcagtggtctttgcggtttgattccttgttggcactgccactgcatactttgtgaaagatcagtcaagataaggatattttttaatgtcccttagaagttcagggtcagtatccatgcagaccatttctaatgttggaagtagtaatgtttgacgagctttgtttctggttgtaggcgtcttaaactgatgcacctctcacattggtcaatccagttagaatataccggtgcatcttaggcatagaat
gi|13 : aCATCACT---------TCCCCTC-CTTTTATTAAAAATGACTTC-ACGTCAAATAAAGGAAGACTTACCC--AGGAACT-----AGC---GCGAAATCCTGAAATA-CTGCATAAATATGT-TACAATGGAAATAA--AAAACATGGAAATTCAGT--A-AAATT----TATT-CCTG-TAAAACCATATTTTTAAAAGActtg
gi|16 : TGTAACAGGGTTTTATGTCGCAGATG---A---AATAAC
gi|2 : aacATGTAACAGGGTTTTATG------ATG---A---AATAACT-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTATT--------------AATAATAGCAAACAAAACGAATAA-CCCTGAAATAAAACAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGGAAATATTACAAACAAGGGAGATAACTCTG---AAGTTTACAATGCTGAA--------------TTA--ATCCAATTCTA--T-AGACAAA--CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATGCTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCATTTA-ATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAAATGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAA-ATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTATA-CACTATAA--TA-TATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AAAGT-A-AAACCTATAAGGCAGTTGTCTCCAATATTACAA-CTTCTCTACTTCAAAGCTGGACAA-AGA-ATA-----CCCAAAACAACTCACAAAACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTT----AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--AAT-AAT-A--AAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT----GAA-TGACTTCCATGTCATTCAAAAGAAGACTTACC-TGATGAATTCTGCAAACTTAGCAACCTTCT--AATAGCTG-----ATATATCT-CAAT-AAAATAATTAAAA----GAAATT--ATTTACAAATTCAGGAGTTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTGTCCATTTGCTTCAACTGACTAGCCATTTTAC-TGAAGCAATCAGCTTTCTGCAACCAAT-CAGGCTTCTCTTTT-CTCTGATATTGACACTT--TGTTTTTGGAAAACATAA-CTTTCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATT-CCTGTTTCCA--TCATCGTCATCAT---------CATTG-----TTGATGT--CATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTG-TCGTGACAGATGACAAGCTATCATATATTGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTT-CCTCCAGGTACTCCGCACCATTCTGATCGTCACCA-GTAATGATGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATGCTCCTATATAGCTTACACTATCTGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----A-CT---G-T--CCTAGTTCCAGTTTTCTTTTGTGACCTAATTCCTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGAT-CCAATGGGTAAAAGCAAGTTCCTGTG-AAG-AATCCTGGTTCTTCCTTGCCCATTTTCTCTTTG-CACCTTGTAGACTGGAACTT--GGTTATTAGGCTGTC---TAAT--GATGATGTAGGGGTTATCTTCCCATTTATCCTTGATCTTATGCTTACCTTCGAAACTG--ACTA-TTTTCACTAACACTCTGTCACCTTCATTCAATACTGCTCCCTTTACCTT-GCTGTCATAGTGAAA-TT---TCTGTTT--TCCTTGGGAATTCTTGATGGCTGT-CTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGTAATTTATCGATGTACGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAAGTTTGGTTCTCTGCCGAACATCAAATAATAAGGGGAA-AACCT-GTTGAATCATGAATTGT--GCAATTGTA-TGCATGTACTAATGGGTT--T-ATGTAATTTTTCCAATCGTGTTT-TTGTTC
gi|3 : CATCATCCGTGTCTTCA---TCCTCTGT--------GGATGGA-AC-GGA-C----AG---AA---TGC-TA--TCCTGCTTTCTCAT-CCAACTTCTTCTTG-GTGCTGGAG-TTGGTACAGGAGAAGAAATCTTGG-TTCCAGTGGGAAGAAGCAGATTCCGATGTAAA-G-TTCTGCATCTACCTT-------CTCTCCT-G--ACTTTATATACTGGAATGTC-GAT-GTTAGGCAGTT---CCAT--GACAATGTAGGGATTATCCTCCCAACGGTCTGCAATACTATGCTTTCCTTCAAA--TGAAACAA-TTCTAAC----ACTCTGTCACCAACCTCCAAAGCAACTCCTCTTGTCTT-AATGTCGTAGTTTGA-CT---TCTGTTGAATC--TGGCTGTTTTATATGGCTGT
gi|3 : TTATCTAGTCCAAACAGCAAATCAGTAGGAAGATTGGGCTCTTGACCAAACATCAAGGAAAATGGTGAATATCCT-GTGGTTTCATG-TTTGTTGGC-ATTGTGCTG-ATGTACTAGTGGACTAATAATGTAGGCTTTCCAATT-AGACT-gttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccattatctagtccaaacagcaaatcagtaggaagattgggctcttgaccaaacatcaaggaaaatggtgaatatcctgtggtttcatgtttgttggcattgtgctgatgtactagtggactaataatgtaggctttccaattagacttctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|4 : catcatccgtgtcttcatcctctgtggatggaacggacagaatgctatcctgctttctcatccaacttcttcttggtgctggagttggtacaggagaagaaatcttggttccagtgggaagaagcagattccgatgtaaagttctgcatctaccttctctcctgactttatatactggaatgtcgatgttaggcagttccatgacaatgtagggattatcctcccaacggtctgcaatactatgctttccttcaaatgaaacaattctaacactctgtcaccaacctccaaagcaactcctcttgtcttaatgtcgtagtttgacttctgttgaatctggctgttttatatggctgtgttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccaATGTAACAGGGTTTTATGTCG-AGATG---A---AATAACAATAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATGTGATGTGGAATAGAAATAATAGCAAACAAAAC-AAAAA-CCCTGAAATAAA-TAATAACATATAAGTTACATTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTCACAATGCTGAA--------------TTA--ATCCAAT-CAA--T-AGACAAAAACTCTCC-T-TTC-TATTACTTTG--------TCAAAAATCA-TAA-ACAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTCA-CTTT--ATATCAAAT---GA---CATGAG---ATA--CTAA---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTAGATATGGACAACGTACAATACAATTCAGAGGCC-ATGAGAGACTGCAAAT-ATA-AATTACACTCTTAATATA-TTTGTC-GTATAAAACATAACTCTATATTAAAATCATATTGTGATACAAAATATGGT-C-AAATTACTTT-ATAAA-AAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTT--GCTTATTAGAAATTTATATTTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TC-A-ATATGTC-AATTTCA-AAACC--TAAGAA---TGTCTCCAAAA-TACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATC-----CCTAAAACAACTCACA-GACTTTTGGAGG--AAACCAGCAAACTAA-T-AAAC-ACGAGATAA-TGCAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAA-GCAACCAAT------TAGTTCGGGTA--CTTCCctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|5 : AACATCATAAAGAAAGGAGAG-AATCTTGTAGTGTTATGTGTGGT--GGTATTGTA-TGTATGGACTAGCGGTCT--T-GTGTGGGCTTTCCAGTT-TGACT-TTATT
gi|6 : tcttcccagcagtcatcacgcttgtgcattccgtcaaaggcggccactttgaataacaccctgtctccagtgcactgtgtgaattttagagtcataaagagaattttgccttgattggctaaactttgctgcagtgttggcaatgcagacttgaatcactcttcaaggttctggacatatgctaacaaactcttagtcttttcagcactgcctaacccaaatggtagattATGTAACAGGGTTTCATGTCGCAGATGTATACGTAATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTATT-GATGTGGAATAGAAATAATAGCAAACAAAACAAAAAAACCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCAA-CAAAGGAGATAACTCTATCTGAGTTTACAATGCTGAAATTGCTGAATTTATTTATTATCCAATTCAAAGTGAGACAAAA-CTCTCCCTATTAATAT-ACTTTAAATTATTGTCAAAAATCAATAATAAATTTACACCTAACCATACACATGACTAAGTGATACTGTATATTTGATCTATAGATAAGATAACATGATACTTTAACTTTTAATGTCAAATATTGAAATCATGAAGGAATA--CCATATTTAAAAATGCAATTGTATGTAGGAACATATTACCTAATTTTCTAATGCGCGATTAAGGCAGTTCCCATA-TGAAAGA-TGCAGTA-----------------AT-CAATTCAGAGGCCCATGAGAGACttaatctggttcaagtttcccagcatagagtgcaaattctgttaaatctctctgtgatgccattacccatagggtgatacgggtcaatctaaactttgagatgcctgctatctgacgcagttctttgatgaatttacaagaaaagtttgtgtcctggtcagaatgaattattttcggaagtccgtaaagggataacgaaaatattaaaagaggcatctgctgtaatctttttttttgtagggacagcaactgcaaatatggtaaaatgatccataatgatcaggataatctgtactacacccttagatggttctgaagtctagtagtccatacatacaagttgcagtggttgagtagtagaaatactgtgttggttattaggctttttgaacttcatagcggtgtgcccatgttgcaatgtcatgacgcattcttggccagtagagtc
gi|7 : TTATTAAAAAATTAT---TATAATTA-GTAAATGAATGTTAGAATTGCCAAGGAGAAAAGA--AGTCTTACTA-TCAA-ATAAGTC-AATGTCA--AATTC-TAAGG-----GTCTCTGAGAATACAA-CCTCTCTACTTCA--TCTGGACAA-AGC-ATG-----CCTAAATCAACTCA-AAGACTT--GGAAGGAAAACCAACAAACCAA-TAAAAC-ACTAGAT-A-T-CAAAACTTAAAAACC-AATAGGAAACCATACAAGTTC---AACC-CCATGG--AGATCACCATT-TTAAA-CCCTAAGGCAACCAATTACTAGTAGTTCGGGTA-CTCCCTGATACACTTCAA-TGCAC--GGTC-AGGT-AGCTATTTTCA-TGACTGTATCATGGGTTTGC--ATGGTC---ATATATA--TATA--GA-TA-CATGTAATTTATA-ATAA--AATAAAT-ATCAAT--GAATTCTATGAATTAATTTATT-TATTAAATAAATTA--ATAAATTCATC
gi|8 : ctaacatAGGAGAAGAGATAGGTCTTA-TGGTCAATAT-TGTCTAATGTCAAGAACCT--AAGAC--CTGTCTCCAAAATTACAAACTTTGCT-CTTCAAATCTGGACAATATG-ATATTTACCCAAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAATTAAAACAACGAGAT-ATT-CAAAAC-TAAAAACCAAATAGGAAACTAGATAACTTTCAAAAACGCCATTGATACTTGACCA-T-TTATAGCCCTAAGGCAACCAAT------TAGTTCGGGTACCCTTCCGATATACTTCAATCGCACGTGGCCGAGGTAAG-TA-----ATTGACT-----ATAGGGTTACATAT-ATCAAAA-----A--TCTACTGAGTAGCATGTAATT-ATACATGAAGACT-AATAA-TAAT--GAATTCCATAAATTAATTTATT-AATTAAATAACTCAATATAAATTC
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GATTCTTGGTTGGAACTGCTTATGGGGCAAATTGGTGAAGATGGTCTTGTATATGACAATGAAACATTGAATTCCCCTTTGAAGGCTCCAGAGTCAAAAAAAGTTCCACGCATACTAGCTCCAGGGGTTTGGAAGCTGTGGTAGATACTTACCTGGAAGCGCGTTGATTGTTTGGGGTCTTAAACTTCAGACATCTATTCGCAGCTATCTACCCCATGTGGCAATATCACTCCTCATCTTTTGGCCATAGAACCTGTCCATCACTTAAAGATGTTGTCCTTTCTCTTCCTGGATGTCCCATTTCTATTTGTGAAGATGGTCTAGATCACAGGTACAATGTCCTTTGGAACAACCACTTGGTGATTGTTCGGTCCCATTCATCAACTTGCTGTTAACCTCTTGTGAG
Unaligned ( gi|10 ): TTTCCAGTTCGCTGTTTTAGTCGTGCTGCAGTGTTCCATCATAAAAATAAGTGCCTTGTTGAATCTTTCGGAGATGCCGCTACCCATTGCAAAGTAGGGAGTGGTACGCGATTTTGAAATTCTTGCCTAGCTACAAAATCTGTTGAAGCAGCTTTCTTGTGAAGTGGGATACTTGGTCCGAGTGAATCTTTTCTATGGAGTTCATAGGGAATCACAAAGTTGTTTAAAAATGCATCTGTCGTGGTTTTTTCAGTCTAATCTCTAGTCGGGACAGCTACAATAAACTTGGTAAAGTGGTCCGTCATAACTAAAACATGGTTCGATGTAAGGTAATCCATAGATACAAGT
Unaligned ( gi|11 ): ACCCTTAGATGGTTCTGACGTCTAGTAGTCCATACATTCAAGTTGCAGTGGCTGAGTAGTAGGAATACTGTCTTGCGAAGCACTTTGGTTATTAGGCTTTTTGAACTTCATAACGGTCTTCCCATGTTGCAAGGTCATGACGCATTCTTGGCCAGTAGAATCTGTCCATTACTAGTTCTACAGTTTTCTCTCTACCCGGATGCCCCATCTTATCATGAAGAAATTCCAGTGTGGTAGCTATAACTTCTGAGGAAACAAGTACCTGTTGATGTTCCCTATCC
Unaligned ( gi|14 ): CTCTGTGGATGCCTTACCCATAGGGTAGATACAGGTATCATCTAATCTTTGGGGAACTCTGCTAATCTGACACAGTTCTTTGATGAAATTTACAAGAAAGATGTGTGTCCTG
Unaligned ( gi|15 ): CTGTCATAAGTAGCACATTTTGAATTCCACTTTTTGAAGGCTCCAGAGTAAAATAGTCCATGCATACTAGTTCCAGGGGTTGAGATGTGGTGATACTTACC
Alignments
lowQualScore : 2222222 1 1 1 1 1 1 1 1 1 77777777777777 11 2222 22 1 1 44444444 1 1 2222 222 1 11 11 2222 1 11 33333333 111 11 2222 11 2222 2222 1 1 111 1 77777777777777777 1 1 1 1 11 1 11 1 22222222222 2222 22222 11 22222 11 222222 1 11 11 1 1 2222222 22222 11 1 333333333333 11 1 1 1 1111 1 2222 11 1 11 11 1 2222 1 11 1 11 33333 1111 222 4444 222222 33333333333 1 11 1 1 1 1 11 1 1 1 1 1 11 333333333 22222 11 1 1 1 11 1 1 1 1 1 1 1 1 11 1 888888888888888 22 1 1 333333 1 111 11 11 11 111 11 11 1 111 11 11 1 2222 111 1 111 11 1 1 1 11 1 1 1 1 11 11 1 1 11 2222 1 1
lowQualScore : 3 8 6666666 3 3 3 6 2 3 3 3 3 0 3 7 88888888888888 88 7 2222 00 6 3 3 7 88888888 3 3 8888 333 3 88 88 8888 3 88 22222222 777 33 0000 66 3 3 33 1111 1111 3 0 0 000 3 0 00000000000000000 55 2 2 7 7 3 7 7 6 6 7 3 6 7 7 3 7 7 6 7 3 7 7 33 0 0 0 11 6 8 0 8 0 8 1 11111111111 4444 3 6 8 3 0 0 0 8 8 00000 1 99 11 8 0 0 8 8 8 8 8 8 0 33333 8 11 5 8 8 6 8 333333 8 0 33 22 0 0 6666666 55555 55 33 0 888888888888 33 0 0 6 0 7777 1 0 1111 33 0 33 44 3 9999 3 6 0 6 44 2 6 7 0 1 88 6 33333 7777 444 7 1111 333333 6 6 7 7 44444444444 5 22 88 5 5 5 5 88 1 5 1 5 5 5 5 88 888888888 77777 88 5 5 5 88 1 5 5 5 5 5 5 5 5 88 5 1 1 0 6 6 3 7 7 7 333333333333333 6 6 55 3 3 7 888888 7 7 1 2 1 0 888 1 99 0 0 3 88 0 1 1 66 22 777 33 00 0 2 1 111 8 1 22 33 1 0 6666 0 0 1 88 222 999 0 777 33 2 6 1 5 1 5 1 5 88 6 2 2 1 1 1 0 0 0 1 22 11 33 9 0 9 9 00 0 1111 999 3 0 1 0
lowQualScore : . . ....... . . . . . . . . . . . . .............. .. . .... .. . . . . ........ . . .... ... . .. .. .... . .. ........ ... .. .... .. . . .. .... .... . . . ... . . ................. .. . . . . . . . . . . . . . . . . . . . . . . .. . . . .. . . . . . . . ........... .... . . . . . . . . . ..... . .. .. . . . . . . . . . . ..... . .. . . . . . ...... . . .. .. . . ....... ..... .. .. . ............ .. . . . . .... . . .... .. . .. .. . .... . . . . .. . . . . . .. . ..... .... ... . .... ...... . . . . ........... . .. .. . . . . .. . . . . . . . .. ......... ..... .. . . . .. . . . . . . . . . .. . . . . . . . . . . ............... . . .. . . . ...... . . . . . . ... . .. . . . .. . . . .. .. ... .. .. . . . ... . . .. .. . . .... . . . .. ... ... . ... .. . . . . . . . . .. . . . . . . . . . . .. .. .. . . . . .. . .... ... . . . .
lowQualScore : 2 8 0000000 3 3 3 7 0 3 3 3 3 7 3 3 33333333333333 33 3 7777 77 7 3 3 3 33333333 3 3 3333 333 3 33 33 3333 3 33 33333333 555 88 8888 88 2 2 88 2222 2222 2 0 0 222 2 0 00000000000000000 88 5 5 3 3 3 3 3 7 7 3 3 7 3 3 3 3 3 7 3 3 3 3 22 0 8 8 00 0 0 8 0 8 0 4 00000000000 6666 2 0 0 8 8 8 6 0 0 00000 0 66 22 0 8 8 0 0 0 0 0 0 8 00000 0 00 0 0 0 0 0 000000 0 0 88 55 0 0 0000000 00000 55 88 0 222222222222 88 0 0 5 0 2222 0 0 8888 88 0 88 00 3 3333 3 7 7 7 00 0 7 3 7 0 33 7 33333 0000 333 3 7777 777777 7 7 3 3 33333333333 0 00 00 0 5 5 5 00 0 5 0 0 5 5 0 55 000000000 55555 00 5 0 0 55 0 5 0 0 5 5 5 5 5 00 5 0 0 7 7 7 7 3 3 3 000000000000000 7 7 33 3 3 3 333333 3 3 2 5 0 0 000 0 00 8 8 2 88 2 0 0 55 55 555 88 88 8 5 2 000 8 0 22 88 2 0 5555 2 8 2 00 888 222 0 555 88 5 7 0 5 0 5 0 5 55 7 0 0 0 0 2 2 0 0 2 22 00 88 8 0 0 2 88 2 2222 222 2 0 0 0
consensus : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAA-CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
Reference ( family-5803 ) : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAA-CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
gi|1 : TAAG---ATAGTCTGT-----AAATTGC--TTATGTA-A--AACATA----CCAATCT----A-G-G-GAT---GACAGTCTCCATAATGAAAAA-TGCCGTA-----------------ATA-AATTCAGAG-CCCATGAAGAACTGCAAATTATATAATTACACT-T-AATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCA-ATTGTGAGACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATC-TCTCTGTGCAAATACTGGCAAATTAA--ATGCAGTTTTTACAGGAGTTTTTAC-GTTTAGCTTATTAGAAATTTATA-TTAGAATTAAGTAAATAAACTTTAAACTTACCA-GGAGAAG-TA--AATCTTAATG-TCAA-ATATGTC-AAAGT-A-GA-----TAAGAC--TCTTCTC-AAAATTCAAA-CTTCT--GCT-CAAAGCTGGACAT-AGATATA-----CCAAAAACAACTCACAG-ACTT--GGGAGGAAAACCAGCAAAACAA-TAAA-C-ACGAGAT-A-T-CAAAAA-ACAAAACC-AAT--GAAAATAGATAACT-----AAAC-CCATGG--ACTT--CCA-TATTA-A-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCTATATACTTCAA-CGCAC--GGC--AGGT-AG-TA-----A-TGACT-----ATGG--TTAC--AT-ATC---A-----AAATCTA--GA-TA-CATGTAATTCATA-AT----ACT-AAT-A-AAATAAGAATTCCATAATTAAATTGATTTAATTAAATAAATCA--ATAAATTCATTAC-CTTACATTCTCCCCTCACTTTT--TGAAA-TGACTTCCATGTCATTCAAAAGAA-ACTTACTCTGATGAA-TCTGCAAACTTAGCAACTCTCT--AATAGCTG-----ATATA-CTGCAA---AAAAAATTAAAAA---GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A---TT---AAAGAGTGC-TTCGATGTCTCTTTTACCATT--CTTCAACTGACTAGCCATTCTACGTGA-GCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTGTTGGAAAACATAAACTTGCCATCCAACGTGGTTTCGT-CTGG-TCGAGTTG-ATCTTCGTAGATCAACATTGCTTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTC-GCATCTGGCTCTCCGACGTTAGTA-TACTTGGTCGTGACAGATGACAAGC--TCATCTA-CGTGTTACTGGTGCTGGAATCAGGATCATCAGAT-TAACATCT-GAATCTGA-TGAGAGCGTC-TCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGG-GGTACTGTGATCCTCATCCTCAGATATTGTATG--CCTCGGGTATAGGA-ATTCTCCTATATAGCTAACACTATCTGAATCATCAGAATCCTCTGTCTGACTTTGGATTGATACTTGATCACTTAACTCAAGTTTGCCTAGTTCCAGTTTTCTCTT--GACCTAACTCTTGTGAGCTGGTACTGGG-GCTGGTAA------CTTAGATTCCAATGGGTAAAAGCAAATTCCTGTG-AAG-A-ATCCGGTTCTTCCTTGCCCATCTTCCCTTTGTCACCTTATAGACTGGAACTTT-GGTTATTAGGCTGTC---TAAT--GATGATGTAGGG-TTAT-CTTCCATTTATCT-TAAT-CTATGCTTACCTTCGAAACTG--ACTACTTTTCACCCA-ACTCTGTCACCTTCTTTCATAACG--TCCCTTTACCTT-GCTTTCATAGTGAAATTT---TCTGTTT--TCCTT-CGATTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGAAATTTA-CGATGTAAGCTGAATTCGATC-AGAATGAAA--TTTGATCAATGC--AAAATTAAATCAATGGGCA-GTTGGTTTCTCTGCC-AACATCAAATAATAGGGGGGA-AACCT-GTAGAATCATGAATTGT--GCAATTGTA-TG-ATG-ACAA--GGGTT--A-ATGTA---TTTCCAA-T-TGTTTATTGTTC
gi|12 : CCTATGGGCAGAA-CAAAATCCGATG-GAGTG-TTCTGGTTCTGTCTGTTCCATTTTCTCGCTG-AACGATGAACACTGGAACATCTGG--GTTAGGTTGACGCACAATCTGA-----TAGGGTTCTTCCTCCCACTTATCTGCTATCTTGTGCTTCCCGTCGAATGTC--ACCA-CTTTCACCAAGACTCTATCCCCTTCCTGCAAATCTACTCCCCTCATTTCAG--GTCGTAG---GA-TTTGCTCTGTTT--CTCTggatcgtcagttcctagcatggaaatgagcgtcctattaaatctattctgtcaggcccgttgcccttggaagttagggagtagttctggactttgtattcctgtcatggcatagtatctctaatgatgttgctgcagaagtggctcctgacaagtgcagttttctgtggtagtccataattggcaataaagcttgaaagatagcatctgcagtggtctttgcggtttgattccttgttggcactgccactgcatactttgtgaaagatcagtcaagataaggatattttttaatgtcccttagaagttcagggtcagtatccatgcagaccatttctaatgttggaagtagtaatgtttgacgagctttgtttctggttgtaggcgtcttaaactgatgcacctctcacattggtcaatccagttagaatataccggtgcatcttaggcatagaat
gi|13 : aCATCACT---------TCCCCTC-CTTTTATTAAAAATGACTTC-ACGTCAAATAAAGGAAGACTTACCC--AGGAACT-----AGC---GCGAAATCCTGAAATA-CTGCATAAATATGT-TACAATGGAAATAA--AAAACATGGAAATTCAGT--A-AAATT----TATT-CCTG-TAAAACCATATTTTTAAAAGActtg
gi|16 : TGTAACAGGGTTTTATGTCGCAGATG---A---AATAAC
gi|2 : aacATGTAACAGGGTTTTATG------ATG---A---AATAACT-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-T-------------AATAATAGCAAACAAAACGAATAA-CCCTGAAATAAAACAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGGAAATATTACAAACAAGGGAGATAACTCTG---AAGTTTACAATGCTGAA--------------TTA--ATCCAATTCTA--T-AGACAAA--CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATGCTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCATTTA-ATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAAATGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAA-ATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTATA-CACTATAA--TA-TATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AAAGT-A-AAACCTATAAGGCAGTTGTCTCCAATATTACAA-CTTCTCTACTTCAAAGCTGGACAA-AGA-ATA-----CCCAAAACAACTCACAAAACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTT----AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--AAT-AAT-A--AAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT----GAA-TGACTTCCATGTCATTCAAAAGAAGACTTACC-TGATGAATTCTGCAAACTTAGCAACCTTCT--AATAGCTG-----ATATATCT-CAAT-AAAATAATTAAAA----GAAATT--ATTTACAAATTCAGGAGTTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTGTCCATTTGCTTCAACTGACTAGCCATTTTAC-TGAAGCAATCAGCTTTCTGCAACCAAT-CAGGCTTCTCTTTT-CTCTGATATTGACACTT--TGTTTTTGGAAAACATAA-CTTTCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATT-CCTGTTTCCA--TCATCGTCATCAT---------CATTG-----TTGATGT--CATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTG-TCGTGACAGATGACAAGCTATCATATATTGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTT-CCTCCAGGTACTCCGCACCATTCTGATCGTCACCA-GTAATGATGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATGCTCCTATATAGCTTACACTATCTGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----A-CT---G-T--CCTAGTTCCAGTTTTCTTTTGTGACCTAATTCCTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGAT-CCAATGGGTAAAAGCAAGTTCCTGTG-AAG-AATCCTGGTTCTTCCTTGCCCATTTTCTCTTTG-CACCTTGTAGACTGGAACTT--GGTTATTAGGCTGTC---TAAT--GATGATGTAGGGGTTATCTTCCCATTTATCCTTGATCTTATGCTTACCTTCGAAACTG--ACTA-TTTTCACTAACACTCTGTCACCTTCATTCAATACTGCTCCCTTTACCTT-GCTGTCATAGTGAAA-TT---TCTGTTT--TCCTTGGGAATTCTTGATGGCTGT-CTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGTAATTTATCGATGTACGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAAGTTTGGTTCTCTGCCGAACATCAAATAATAAGGGGAA-AACCT-GTTGAATCATGAATTGT--GCAATTGTA-TGCATGTACTAATGGGTT--T-ATGTAATTTTTCCAATCGTGTTT-TTGTTC
gi|3 : CATCATCCGTGTCTTCA---TCCTCTGT--------GGATGGA-AC-GGA-C----AG---AA---TGC-TA--TCCTGCTTTCTCAT-CCAACTTCTTCTTG-GTGCTGGAG-TTGGTACAGGAGAAGAAATCTTGG-TTCCAGTGGGAAGAAGCAGATTCCGATGTAAA-G-TTCTGCATCTACCTT-------CTCTCCT-G--ACTTTATATACTGGAATGTC-GAT-GTTAGGCAGTT---CCAT--GACAATGTAGGGATTATCCTCCCAACGGTCTGCAATACTATGCTTTCCTTCAAA--TGAAACAA-TTCTAAC----ACTCTGTCACCAACCTCCAAAGCAACTCCTCTTGTCTT-AATGTCGTAGTTTGA-CT---TCTGTTGAATC--TGGCTGTTTTATATGGCTGT
gi|3 : TTATCTAGTCCAAACAGCAAATCAGTAGGAAGATTGGGCTCTTGACCAAACATCAAGGAAAATGGTGAATATCCT-GTGGTTTCATG-TTTGTTGGC-ATTGTGCTG-ATGTACTAGTGGACTAATAATGTAGGCTTTCCAATT-AGACT-gttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccattatctagtccaaacagcaaatcagtaggaagattgggctcttgaccaaacatcaaggaaaatggtgaatatcctgtggtttcatgtttgttggcattgtgctgatgtactagtggactaataatgtaggctttccaattagacttctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|4 : catcatccgtgtcttcatcctctgtggatggaacggacagaatgctatcctgctttctcatccaacttcttcttggtgctggagttggtacaggagaagaaatcttggttccagtgggaagaagcagattccgatgtaaagttctgcatctaccttctctcctgactttatatactggaatgtcgatgttaggcagttccatgacaatgtagggattatcctcccaacggtctgcaatactatgctttccttcaaatgaaacaattctaacactctgtcaccaacctccaaagcaactcctcttgtcttaatgtcgtagtttgacttctgttgaatctggctgttttatatggctgtgttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccaATGTAACAGGGTTTTATGTCG-AGATG---A---AATAACAATAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATGTGATGTGGAATAGAAATAATAGCAAACAAAAC-AAAAA-CCCTGAAATAAA-TAATAACATATAAGTTACATTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTCACAATGCTGAA--------------TTA--ATCCAAT-CAA--T-AGACAAAAACTCTCC-T-TTC-TATTACTTTG--------TCAAAAATCA-TAA-ACAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTCA-CTTT--ATATCAAAT---GA---CATGAG---ATA--CTAA---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTAGATATGGACAACGTACAATACAATTCAGAGGCC-ATGAGAGACTGCAAAT-ATA-AATTACACTCTTAATATA-TTTGTC-GTATAAAACATAACTCTATATTAAAATCATATTGTGATACAAAATATGGT-C-AAATTACTTT-ATAAA-AAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTT--GCTTATTAGAAATTTATATTTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TC-A-ATATGTC-AATTTCA-AAACC--TAAGAA---TGTCTCCAAAA-TACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATC-----CCTAAAACAACTCACA-GACTTTTGGAGG--AAACCAGCAAACTAA-T-AAAC-ACGAGATAA-TGCAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAA-GCAACCAAT------TAGTTCGGGTA--CTTCCctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|5 : AACATCATAAAGAAAGGAGAG-AATCTTGTAGTGTTATGTGTGGT--GGTATTGTA-TGTATGGACTAGCGGTCT--T-GTGTGGGCTTTCCAGTT-TGACT-TTATT
gi|6 : tcttcccagcagtcatcacgcttgtgcattccgtcaaaggcggccactttgaataacaccctgtctccagtgcactgtgtgaattttagagtcataaagagaattttgccttgattggctaaactttgctgcagtgttggcaatgcagacttgaatcactcttcaaggttctggacatatgctaacaaactcttagtcttttcagcactgcctaacccaaatggtagattATGTAACAGGGTTTCATGTCGCAGATGTATACGTAATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACAAAAAAACCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCAA-CAAAGGAGATAACTCTATCTGAGTTTACAATGCTGAAATTGCTGAATTTATTTATTATCCAATTCAAAGTGAGACAAAA-CTCTCCCTATTAATAT-ACTTTAAATTATTGTCAAAAATCAATAATAAATTTACACCTAACCATACACATGACTAAGTGATACTGTATATTTGATCTATAGATAAGATAACATGATACTTTAACTTTTAATGTCAAATATTGAAATCATGAAGGAATA--CCATATTTAAAAATGCAATTGTATGTAGGAACATATTACCTAATTTTCTAATGCGCGATTAAGGCAGTTCCCATA-TGAAAGA-TGCAGTA-----------------AT-CAATTCAGAGGCCCATGAGAGACttaatctggttcaagtttcccagcatagagtgcaaattctgttaaatctctctgtgatgccattacccatagggtgatacgggtcaatctaaactttgagatgcctgctatctgacgcagttctttgatgaatttacaagaaaagtttgtgtcctggtcagaatgaattattttcggaagtccgtaaagggataacgaaaatattaaaagaggcatctgctgtaatctttttttttgtagggacagcaactgcaaatatggtaaaatgatccataatgatcaggataatctgtactacacccttagatggttctgaagtctagtagtccatacatacaagttgcagtggttgagtagtagaaatactgtgttggttattaggctttttgaacttcatagcggtgtgcccatgttgcaatgtcatgacgcattcttggccagtagagtc
gi|7 : TTATTAAAAAATTAT---TATAATTA-GTAAATGAATGTTAGAATTGCCAAGGAGAAAAGA--AGTCTTACTA-TCAA-ATAAGTC-AATGTCA--AATTC-TAAGG-----GTCTCTGAGAATACAA-CCTCTCTACTTCA--TCTGGACAA-AGC-ATG-----CCTAAATCAACTCA-AAGACTT--GGAAGGAAAACCAACAAACCAA-TAAAAC-ACTAGAT-A-T-CAAAACTTAAAAACC-AATAGGAAACCATACAAGTTC---AACC-CCATGG--AGATCACCATT-TTAAA-CCCTAAGGCAACCAATTACTAGTAGTTCGGGTA-CTCCCTGATACACTTCAA-TGCAC--GGTC-AGGT-AGCTATTTTCA-TGACTGTATCATGGGTTTGC--ATGGTC---ATATATA--TATA--GA-TA-CATGTAATTTATA-ATAA--AATAAAT-ATCAAT--GAATTCTATGAATTAATTTATT-TATTAAATAAATTA--ATAAATTCATC
gi|8 : ctaacatAGGAGAAGAGATAGGTCTTA-TGGTCAATAT-TGTCTAATGTCAAGAACCT--AAGAC--CTGTCTCCAAAATTACAAACTTTGCT-CTTCAAATCTGGACAATATG-ATATTTACCCAAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAATTAAAACAACGAGAT-ATT-CAAAAC-TAAAAACCAAATAGGAAACTAGATAACTTTCAAAAACGCCATTGATACTTGACCA-T-TTATAGCCCTAAGGCAACCAAT------TAGTTCGGGTACCCTTCCGATATACTTCAATCGCACGTGGCCGAGGTAAG-TA-----ATTGACT-----ATAGGGTTACATAT-ATCAAAA-----A--TCTACTGAGTAGCATGTAATT-ATACATGAAGACT-AATAA-TAAT--GAATTCCATAAATTAATTTATT-AATTAAATAACTCAATATAAATTC
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GATTCTTGGTTGGAACTGCTTATGGGGCAAATTGGTGAAGATGGTCTTGTATATGACAATGAAACATTGAATTCCCCTTTGAAGGCTCCAGAGTCAAAAAAAGTTCCACGCATACTAGCTCCAGGGGTTTGGAAGCTGTGGTAGATACTTACCTGGAAGCGCGTTGATTGTTTGGGGTCTTAAACTTCAGACATCTATTCGCAGCTATCTACCCCATGTGGCAATATCACTCCTCATCTTTTGGCCATAGAACCTGTCCATCACTTAAAGATGTTGTCCTTTCTCTTCCTGGATGTCCCATTTCTATTTGTGAAGATGGTCTAGATCACAGGTACAATGTCCTTTGGAACAACCACTTGGTGATTGTTCGGTCCCATTCATCAACTTGCTGTTAACCTCTTGTGAG
Unaligned ( gi|10 ): TTTCCAGTTCGCTGTTTTAGTCGTGCTGCAGTGTTCCATCATAAAAATAAGTGCCTTGTTGAATCTTTCGGAGATGCCGCTACCCATTGCAAAGTAGGGAGTGGTACGCGATTTTGAAATTCTTGCCTAGCTACAAAATCTGTTGAAGCAGCTTTCTTGTGAAGTGGGATACTTGGTCCGAGTGAATCTTTTCTATGGAGTTCATAGGGAATCACAAAGTTGTTTAAAAATGCATCTGTCGTGGTTTTTTCAGTCTAATCTCTAGTCGGGACAGCTACAATAAACTTGGTAAAGTGGTCCGTCATAACTAAAACATGGTTCGATGTAAGGTAATCCATAGATACAAGT
Unaligned ( gi|11 ): ACCCTTAGATGGTTCTGACGTCTAGTAGTCCATACATTCAAGTTGCAGTGGCTGAGTAGTAGGAATACTGTCTTGCGAAGCACTTTGGTTATTAGGCTTTTTGAACTTCATAACGGTCTTCCCATGTTGCAAGGTCATGACGCATTCTTGGCCAGTAGAATCTGTCCATTACTAGTTCTACAGTTTTCTCTCTACCCGGATGCCCCATCTTATCATGAAGAAATTCCAGTGTGGTAGCTATAACTTCTGAGGAAACAAGTACCTGTTGATGTTCCCTATCC
Unaligned ( gi|14 ): CTCTGTGGATGCCTTACCCATAGGGTAGATACAGGTATCATCTAATCTTTGGGGAACTCTGCTAATCTGACACAGTTCTTTGATGAAATTTACAAGAAAGATGTGTGTCCTG
Unaligned ( gi|15 ): CTGTCATAAGTAGCACATTTTGAATTCCACTTTTTGAAGGCTCCAGAGTAAAATAGTCCATGCATACTAGTTCCAGGGGTTGAGATGTGGTGATACTTACC
Alignments
lowQualScore : 2222222 1 1 1 1 1 1 1 1 1 77777777777777 11 2222 22 1 1 44444444 1 1 2222 222 1 11 11 2222 1 11 33333333 111 11 2222 11 2222 2222 1 1 111 1 77777777777777777 1 1 1 1 11 1 11 1 22222222222 2222 22222 11 22222 11 222222 1 11 11 1 1 2222222 22222 11 1 333333333333 11 1 1 1 1111 1 2222 11 1 11 11 1 2222 1 11 1 11 33333 1111 222 4444 222222 33333333333 1 11 1 1 1 1 11 1 1 1 1 1 11 333333333 22222 11 1 1 1 11 1 1 1 1 1 1 1 1 11 1 888888888888888 22 1 1 333333 1 111 11 11 11 111 11 11 1 111 11 11 1 2222 111 1 111 11 1 1 1 11 1 1 1 1 11 11 1 1 11 2222 1 1
lowQualScore : 3 8 6666666 3 3 3 6 2 3 3 3 3 0 3 7 88888888888888 88 7 2222 00 6 3 3 7 88888888 3 3 8888 333 3 88 88 8888 3 88 22222222 777 33 0000 66 3 3 33 1111 1111 3 0 0 000 3 0 00000000000000000 55 2 2 7 7 3 7 7 6 6 7 3 6 7 7 3 7 7 6 7 3 7 7 33 0 0 0 11 6 8 0 8 0 8 1 11111111111 4444 3 6 8 3 0 0 0 8 8 00000 1 99 11 8 0 0 8 8 8 8 8 8 0 33333 8 11 5 8 8 6 8 333333 8 0 33 22 0 0 6666666 55555 55 33 0 888888888888 33 0 0 6 0 7777 1 0 1111 33 0 33 44 3 9999 3 6 0 6 44 2 6 7 0 1 88 6 33333 7777 444 7 1111 333333 6 6 7 7 44444444444 5 22 88 5 5 5 5 88 1 5 1 5 5 5 5 88 888888888 77777 88 5 5 5 88 1 5 5 5 5 5 5 5 5 88 5 1 1 0 6 6 3 7 7 7 333333333333333 6 6 55 3 3 7 888888 7 7 1 2 1 0 888 1 99 0 0 3 88 0 1 1 66 22 777 33 00 0 2 1 111 8 1 22 33 1 0 6666 0 0 1 88 222 999 0 777 33 2 6 1 5 1 5 1 5 88 6 2 2 1 1 1 0 0 0 1 22 11 33 9 0 9 9 00 0 1111 999 3 0 1 0
lowQualScore : . . ....... . . . . . . . . . . . . .............. .. . .... .. . . . . ........ . . .... ... . .. .. .... . .. ........ ... .. .... .. . . .. .... .... . . . ... . . ................. .. . . . . . . . . . . . . . . . . . . . . . . .. . . . .. . . . . . . . ........... .... . . . . . . . . . ..... . .. .. . . . . . . . . . . ..... . .. . . . . . ...... . . .. .. . . ....... ..... .. .. . ............ .. . . . . .... . . .... .. . .. .. . .... . . . . .. . . . . . .. . ..... .... ... . .... ...... . . . . ........... . .. .. . . . . .. . . . . . . . .. ......... ..... .. . . . .. . . . . . . . . . .. . . . . . . . . . . ............... . . .. . . . ...... . . . . . . ... . .. . . . .. . . . .. .. ... .. .. . . . ... . . .. .. . . .... . . . .. ... ... . ... .. . . . . . . . . .. . . . . . . . . . . .. .. .. . . . . .. . .... ... . . . .
lowQualScore : 2 8 0000000 3 3 3 7 0 3 3 3 3 7 3 3 33333333333333 33 3 7777 77 7 3 3 3 33333333 3 3 3333 333 3 33 33 3333 3 33 33333333 555 88 8888 88 2 2 88 2222 2222 2 0 0 222 2 0 00000000000000000 88 5 5 3 3 3 3 3 7 7 3 3 7 3 3 3 3 3 7 3 3 3 3 22 0 8 8 00 0 0 8 0 8 0 4 00000000000 6666 2 0 0 8 8 8 6 0 0 00000 0 66 22 0 8 8 0 0 0 0 0 0 8 00000 0 00 0 0 0 0 0 000000 0 0 88 55 0 0 0000000 00000 55 88 0 222222222222 88 0 0 5 0 2222 0 0 8888 88 0 88 00 3 3333 3 7 7 7 00 0 7 3 7 0 33 7 33333 0000 333 3 7777 777777 7 7 3 3 33333333333 0 00 00 0 5 5 5 00 0 5 0 0 5 5 0 55 000000000 55555 00 5 0 0 55 0 5 0 0 5 5 5 5 5 00 5 0 0 7 7 7 7 3 3 3 000000000000000 7 7 33 3 3 3 333333 3 3 2 5 0 0 000 0 00 8 8 2 88 2 0 0 55 55 555 88 88 8 5 2 000 8 0 22 88 2 0 5555 2 8 2 00 888 222 0 555 88 5 7 0 5 0 5 0 5 55 7 0 0 0 0 2 2 0 0 2 22 00 88 8 0 0 2 88 2 2222 222 2 0 0 0
consensus : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAA-CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
Reference ( family-5803 ) : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAA-CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
gi|1 : TAAG---ATAGTCTGT-----AAATTGC--TTATGTA-A--AACATA----CCAATCT----A-G-G-GAT---GACAGTCTCCATAATGAAAAA-TGCCGTA-----------------ATA-AATTCAGAG-CCCATGAAGAACTGCAAATTATATAATTACACT-T-AATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCA-ATTGTGAGACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATC-TCTCTGTGCAAATACTGGCAAATTAA--ATGCAGTTTTTACAGGAGTTTTTAC-GTTTAGCTTATTAGAAATTTATA-TTAGAATTAAGTAAATAAACTTTAAACTTACCA-GGAGAAG-TA--AATCTTAATG-TCAA-ATATGTC-AAAGT-A-GA-----TAAGAC--TCTTCTC-AAAATTCAAA-CTTCT--GCT-CAAAGCTGGACAT-AGATATA-----CCAAAAACAACTCACAG-ACTT--GGGAGGAAAACCAGCAAAACAA-TAAA-C-ACGAGAT-A-T-CAAAAA-ACAAAACC-AAT--GAAAATAGATAACT-----AAAC-CCATGG--ACTT--CCA-TATTA-A-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCTATATACTTCAA-CGCAC--GGC--AGGT-AG-TA-----A-TGACT-----ATGG--TTAC--AT-ATC---A-----AAATCTA--GA-TA-CATGTAATTCATA-AT----ACT-AAT-A-AAATAAGAATTCCATAATTAAATTGATTTAATTAAATAAATCA--ATAAATTCATTAC-CTTACATTCTCCCCTCACTTTT--TGAAA-TGACTTCCATGTCATTCAAAAGAA-ACTTACTCTGATGAA-TCTGCAAACTTAGCAACTCTCT--AATAGCTG-----ATATA-CTGCAA---AAAAAATTAAAAA---GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A---TT---AAAGAGTGC-TTCGATGTCTCTTTTACCATT--CTTCAACTGACTAGCCATTCTACGTGA-GCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTGTTGGAAAACATAAACTTGCCATCCAACGTGGTTTCGT-CTGG-TCGAGTTG-ATCTTCGTAGATCAACATTGCTTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTC-GCATCTGGCTCTCCGACGTTAGTA-TACTTGGTCGTGACAGATGACAAGC--TCATCTA-CGTGTTACTGGTGCTGGAATCAGGATCATCAGAT-TAACATCT-GAATCTGA-TGAGAGCGTC-TCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGG-GGTACTGTGATCCTCATCCTCAGATATTGTATG--CCTCGGGTATAGGA-ATTCTCCTATATAGCTAACACTATCTGAATCATCAGAATCCTCTGTCTGACTTTGGATTGATACTTGATCACTTAACTCAAGTTTGCCTAGTTCCAGTTTTCTCTT--GACCTAACTCTTGTGAGCTGGTACTGGG-GCTGGTAA------CTTAGATTCCAATGGGTAAAAGCAAATTCCTGTG-AAG-A-ATCCGGTTCTTCCTTGCCCATCTTCCCTTTGTCACCTTATAGACTGGAACTTT-GGTTATTAGGCTGTC---TAAT--GATGATGTAGGG-TTAT-CTTCCATTTATCT-TAAT-CTATGCTTACCTTCGAAACTG--ACTACTTTTCACCCA-ACTCTGTCACCTTCTTTCATAACG--TCCCTTTACCTT-GCTTTCATAGTGAAATTT---TCTGTTT--TCCTT-CGATTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGAAATTTA-CGATGTAAGCTGAATTCGATC-AGAATGAAA--TTTGATCAATGC--AAAATTAAATCAATGGGCA-GTTGGTTTCTCTGCC-AACATCAAATAATAGGGGGGA-AACCT-GTAGAATCATGAATTGT--GCAATTGTA-TG-ATG-ACAA--GGGTT--A-ATGTA---TTTCCAA-T-TGTTTATTGTTC
gi|12 : CCTATGGGCAGAA-CAAAATCCGATG-GAGTG-TTCTGGTTCTGTCTGTTCCATTTTCTCGCTG-AACGATGAACACTGGAACATCTGG--GTTAGGTTGACGCACAATCTGA-----TAGGGTTCTTCCTCCCACTTATCTGCTATCTTGTGCTTCCCGTCGAATGTC--ACCA-CTTTCACCAAGACTCTATCCCCTTCCTGCAAATCTACTCCCCTCATTTCAG--GTCGTAG---GA-TTTGCTCTGTTT--CTCTggatcgtcagttcctagcatggaaatgagcgtcctattaaatctattctgtcaggcccgttgcccttggaagttagggagtagttctggactttgtattcctgtcatggcatagtatctctaatgatgttgctgcagaagtggctcctgacaagtgcagttttctgtggtagtccataattggcaataaagcttgaaagatagcatctgcagtggtctttgcggtttgattccttgttggcactgccactgcatactttgtgaaagatcagtcaagataaggatattttttaatgtcccttagaagttcagggtcagtatccatgcagaccatttctaatgttggaagtagtaatgtttgacgagctttgtttctggttgtaggcgtcttaaactgatgcacctctcacattggtcaatccagttagaatataccggtgcatcttaggcatagaat
gi|13 : aCATCACT---------TCCCCTC-CTTTTATTAAAAATGACTTC-ACGTCAAATAAAGGAAGACTTACCC--AGGAACT-----AGC---GCGAAATCCTGAAATA-CTGCATAAATATGT-TACAATGGAAATAA--AAAACATGGAAATTCAGT--A-AAATT----TATT-CCTG-TAAAACCATATTTTTAAAAGActtg
gi|16 : TGTAACAGGGTTTTATGTCGCAGATG---A---AATAAC
gi|2 : aacATGTAACAGGGTTTTATG------ATG---A---AATAACT-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-T-------------AATAATAGCAAACAAAACGAATAA-CCCTGAAATAAAACAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGGAAATATTACAAACAAGGGAGATAACTCTG---AAGTTTACAATGCTGAA--------------TTA--ATCCAATTCTA--T-AGACAAA--CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATGCTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCATTTA-ATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAAATGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAA-ATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTATA-CACTATAA--TA-TATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AAAGT-A-AAACCTATAAGGCAGTTGTCTCCAATATTACAA-CTTCTCTACTTCAAAGCTGGACAA-AGA-ATA-----CCCAAAACAACTCACAAAACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTT----AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--AAT-AAT-A--AAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT----GAA-TGACTTCCATGTCATTCAAAAGAAGACTTACC-TGATGAATTCTGCAAACTTAGCAACCTTCT--AATAGCTG-----ATATATCT-CAAT-AAAATAATTAAAA----GAAATT--ATTTACAAATTCAGGAGTTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTGTCCATTTGCTTCAACTGACTAGCCATTTTAC-TGAAGCAATCAGCTTTCTGCAACCAAT-CAGGCTTCTCTTTT-CTCTGATATTGACACTT--TGTTTTTGGAAAACATAA-CTTTCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATT-CCTGTTTCCA--TCATCGTCATCAT---------CATTG-----TTGATGT--CATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTG-TCGTGACAGATGACAAGCTATCATATATTGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTT-CCTCCAGGTACTCCGCACCATTCTGATCGTCACCA-GTAATGATGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATGCTCCTATATAGCTTACACTATCTGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----A-CT---G-T--CCTAGTTCCAGTTTTCTTTTGTGACCTAATTCCTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGAT-CCAATGGGTAAAAGCAAGTTCCTGTG-AAG-AATCCTGGTTCTTCCTTGCCCATTTTCTCTTTG-CACCTTGTAGACTGGAACTT--GGTTATTAGGCTGTC---TAAT--GATGATGTAGGGGTTATCTTCCCATTTATCCTTGATCTTATGCTTACCTTCGAAACTG--ACTA-TTTTCACTAACACTCTGTCACCTTCATTCAATACTGCTCCCTTTACCTT-GCTGTCATAGTGAAA-TT---TCTGTTT--TCCTTGGGAATTCTTGATGGCTGT-CTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGTAATTTATCGATGTACGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAAGTTTGGTTCTCTGCCGAACATCAAATAATAAGGGGAA-AACCT-GTTGAATCATGAATTGT--GCAATTGTA-TGCATGTACTAATGGGTT--T-ATGTAATTTTTCCAATCGTGTTT-TTGTTC
gi|3 : CATCATCCGTGTCTTCA---TCCTCTGT--------GGATGGA-AC-GGA-C----AG---AA---TGC-TA--TCCTGCTTTCTCAT-CCAACTTCTTCTTG-GTGCTGGAG-TTGGTACAGGAGAAGAAATCTTGG-TTCCAGTGGGAAGAAGCAGATTCCGATGTAAA-G-TTCTGCATCTACCTT-------CTCTCCT-G--ACTTTATATACTGGAATGTC-GAT-GTTAGGCAGTT---CCAT--GACAATGTAGGGATTATCCTCCCAACGGTCTGCAATACTATGCTTTCCTTCAAA--TGAAACAA-TTCTAAC----ACTCTGTCACCAACCTCCAAAGCAACTCCTCTTGTCTT-AATGTCGTAGTTTGA-CT---TCTGTTGAATC--TGGCTGTTTTATATGGCTGT
gi|3 : TTATCTAGTCCAAACAGCAAATCAGTAGGAAGATTGGGCTCTTGACCAAACATCAAGGAAAATGGTGAATATCCT-GTGGTTTCATG-TTTGTTGGC-ATTGTGCTG-ATGTACTAGTGGACTAATAATGTAGGCTTTCCAATT-AGACT-gttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccattatctagtccaaacagcaaatcagtaggaagattgggctcttgaccaaacatcaaggaaaatggtgaatatcctgtggtttcatgtttgttggcattgtgctgatgtactagtggactaataatgtaggctttccaattagacttctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|4 : catcatccgtgtcttcatcctctgtggatggaacggacagaatgctatcctgctttctcatccaacttcttcttggtgctggagttggtacaggagaagaaatcttggttccagtgggaagaagcagattccgatgtaaagttctgcatctaccttctctcctgactttatatactggaatgtcgatgttaggcagttccatgacaatgtagggattatcctcccaacggtctgcaatactatgctttccttcaaatgaaacaattctaacactctgtcaccaacctccaaagcaactcctcttgtcttaatgtcgtagtttgacttctgttgaatctggctgttttatatggctgtgttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccaATGTAACAGGGTTTTATGTCG-AGATG---A---AATAACAATAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATGTGATGTGGAATAGAAATAATAGCAAACAAAAC-AAAAA-CCCTGAAATAAA-TAATAACATATAAGTTACATTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTCACAATGCTGAA--------------TTA--ATCCAAT-CAA--T-AGACAAAAACTCTCC-T-TTC-TATTACTTTG--------TCAAAAATCA-TAA-ACAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTCA-CTTT--ATATCAAAT---GA---CATGAG---ATA--CTAA---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTAGATATGGACAACGTACAATACAATTCAGAGGCC-ATGAGAGACTGCAAAT-ATA-AATTACACTCTTAATATA-TTTGTC-GTATAAAACATAACTCTATATTAAAATCATATTGTGATACAAAATATGGT-C-AAATTACTTT-ATAAA-AAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTT--GCTTATTAGAAATTTATATTTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TC-A-ATATGTC-AATTTCA-AAACC--TAAGAA---TGTCTCCAAAA-TACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATC-----CCTAAAACAACTCACA-GACTTTTGGAGG--AAACCAGCAAACTAA-T-AAAC-ACGAGATAA-TGCAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAA-GCAACCAAT------TAGTTCGGGTA--CTTCCctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|5 : AACATCATAAAGAAAGGAGAG-AATCTTGTAGTGTTATGTGTGGT--GGTATTGTA-TGTATGGACTAGCGGTCT--T-GTGTGGGCTTTCCAGTT-TGACT-TTATT
gi|6 : tcttcccagcagtcatcacgcttgtgcattccgtcaaaggcggccactttgaataacaccctgtctccagtgcactgtgtgaattttagagtcataaagagaattttgccttgattggctaaactttgctgcagtgttggcaatgcagacttgaatcactcttcaaggttctggacatatgctaacaaactcttagtcttttcagcactgcctaacccaaatggtagattATGTAACAGGGTTTCATGTCGCAGATGTATACGTAATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACAAAAAAACCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCAA-CAAAGGAGATAACTCTATCTGAGTTTACAATGCTGAAATTGCTGAATTTATTTATTATCCAATTCAAAGTGAGACAAAA-CTCTCCCTATTAATAT-ACTTTAAATTATTGTCAAAAATCAATAATAAATTTACACCTAACCATACACATGACTAAGTGATACTGTATATTTGATCTATAGATAAGATAACATGATACTTTAACTTTTAATGTCAAATATTGAAATCATGAAGGAATA--CCATATTTAAAAATGCAATTGTATGTAGGAACATATTACCTAATTTTCTAATGCGCGATTAAGGCAGTTCCCATA-TGAAAGA-TGCAGTA-----------------AT-CAATTCAGAGGCCCATGAGAGACttaatctggttcaagtttcccagcatagagtgcaaattctgttaaatctctctgtgatgccattacccatagggtgatacgggtcaatctaaactttgagatgcctgctatctgacgcagttctttgatgaatttacaagaaaagtttgtgtcctggtcagaatgaattattttcggaagtccgtaaagggataacgaaaatattaaaagaggcatctgctgtaatctttttttttgtagggacagcaactgcaaatatggtaaaatgatccataatgatcaggataatctgtactacacccttagatggttctgaagtctagtagtccatacatacaagttgcagtggttgagtagtagaaatactgtgttggttattaggctttttgaacttcatagcggtgtgcccatgttgcaatgtcatgacgcattcttggccagtagagtc
gi|7 : TTATTAAAAAATTAT---TATAATTA-GTAAATGAATGTTAGAATTGCCAAGGAGAAAAGA--AGTCTTACTA-TCAA-ATAAGTC-AATGTCA--AATTC-TAAGG-----GTCTCTGAGAATACAA-CCTCTCTACTTCA--TCTGGACAA-AGC-ATG-----CCTAAATCAACTCA-AAGACTT--GGAAGGAAAACCAACAAACCAA-TAAAAC-ACTAGAT-A-T-CAAAACTTAAAAACC-AATAGGAAACCATACAAGTTC---AACC-CCATGG--AGATCACCATT-TTAAA-CCCTAAGGCAACCAATTACTAGTAGTTCGGGTA-CTCCCTGATACACTTCAA-TGCAC--GGTC-AGGT-AGCTATTTTCA-TGACTGTATCATGGGTTTGC--ATGGTC---ATATATA--TATA--GA-TA-CATGTAATTTATA-ATAA--AATAAAT-ATCAAT--GAATTCTATGAATTAATTTATT-TATTAAATAAATTA--ATAAATTCATC
gi|8 : ctaacatAGGAGAAGAGATAGGTCTTA-TGGTCAATAT-TGTCTAATGTCAAGAACCT--AAGAC--CTGTCTCCAAAATTACAAACTTTGCT-CTTCAAATCTGGACAATATG-ATATTTACCCAAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAATTAAAACAACGAGAT-ATT-CAAAAC-TAAAAACCAAATAGGAAACTAGATAACTTTCAAAAACGCCATTGATACTTGACCA-T-TTATAGCCCTAAGGCAACCAAT------TAGTTCGGGTACCCTTCCGATATACTTCAATCGCACGTGGCCGAGGTAAG-TA-----ATTGACT-----ATAGGGTTACATAT-ATCAAAA-----A--TCTACTGAGTAGCATGTAATT-ATACATGAAGACT-AATAA-TAAT--GAATTCCATAAATTAATTTATT-AATTAAATAACTCAATATAAATTC
blockSeqs : T C TATACGT A G G G A A . A T . T ATTGCTGAATTTAT TT T AGTG AA C A A T AATTATTG A T TTAC TAC G TG GA GATA A TA ATTGAAAT GGA . ATTT AT T T GG TTAC TCTA T C C TAA A A GATATGGACAACGTACA AC G C T T C T A C C T . C T T A A A C T . A T AT . TA C G T T A AAAACCTAT CAGT C T A A T . TTTAC C AA TT T A A T G T A TTCAA G AT G T . T G TACTAG C T GT CG A C TTTTCA GTATC GT AT G ATATATA CT G G C C GAAG A A ATC . . AT TC . ATTA A C G C C C T A GA G CATAA TTA TGG T CATG CAGT C C A A CCATATTTTTA C GT TG . A . . . T . T C T A . . . . . T G . TA A T G G T A . . A CT T G T G C C T T T ACTGT C G GT . . T AGAAAT A T C G G T TG G TT T A C A CT TT GCA CT TG T C C GCT C C TG AA C . CAAG T TA AG TGA . TGC AA C G A . T T C T AT C A G T T A T T T AA AA TG A C C T AT AATA ATT T G T .
blockSeqs : T . A . . . G . . . . . . T . . . T A . . . . . . . . . . . . . . . GA . . T AA T T . . . T . . TA A . . AC G C . . . T . . . T . . . . . . . C T . A . A . . . . . . T CAAGAACCT CC C A . A . . . T AG TT . . . . . . . TC . . G . . T . . . . . C . . AT . GT . . AAAAA . . . T . GA A . AAT . . . T . . . . G T T . . C . . . TCT TA . . ATTT . . . . AATTT . . . . . . AGAAT . . C . . T . . . T G T . AA T GC T C G T C T . . CA G C T TTG C A AC . T . TAAC A TG GC TTT . . . C G G C G A G A T . . G TT TG . T . T T GT T GGC T . A .
blockSeqs : . . A . . T AA . T . . . T . . TA . . . C G . . . . . . . . T CAAAACCT A T T . A . . . T GG TT . . . . . . . TC . . C . . A . . . . . C . . A . GG . . AA . . . . . AA C . A . . . A . G . G A . . . T G . . . . . A C A GCA A T . . A . . G AA AA . . . . . A A A . . A TG T . . . . G GC T GGC T . A .
blockSeqs : . . . . . T CAAATTCT . C . . . . . . A G . . . . . . . . T . . G . . T . . .
blockSeqCons : CAAAACCT*** C*** AG TT TC***
originalCons : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAA-CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCA-GAACCT-TAAGAC--TTGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
finalCons : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAA-CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCAAAACCT---AAGAC---TGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAAGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GATTCTTGGTTGGAACTGCTTATGGGGCAAATTGGTGAAGATGGTCTTGTATATGACAATGAAACATTGAATTCCCCTTTGAAGGCTCCAGAGTCAAAAAAAGTTCCACGCATACTAGCTCCAGGGGTTTGGAAGCTGTGGTAGATACTTACCTGGAAGCGCGTTGATTGTTTGGGGTCTTAAACTTCAGACATCTATTCGCAGCTATCTACCCCATGTGGCAATATCACTCCTCATCTTTTGGCCATAGAACCTGTCCATCACTTAAAGATGTTGTCCTTTCTCTTCCTGGATGTCCCATTTCTATTTGTGAAGATGGTCTAGATCACAGGTACAATGTCCTTTGGAACAACCACTTGGTGATTGTTCGGTCCCATTCATCAACTTGCTGTTAACCTCTTGTGAG
Unaligned ( gi|10 ): TTTCCAGTTCGCTGTTTTAGTCGTGCTGCAGTGTTCCATCATAAAAATAAGTGCCTTGTTGAATCTTTCGGAGATGCCGCTACCCATTGCAAAGTAGGGAGTGGTACGCGATTTTGAAATTCTTGCCTAGCTACAAAATCTGTTGAAGCAGCTTTCTTGTGAAGTGGGATACTTGGTCCGAGTGAATCTTTTCTATGGAGTTCATAGGGAATCACAAAGTTGTTTAAAAATGCATCTGTCGTGGTTTTTTCAGTCTAATCTCTAGTCGGGACAGCTACAATAAACTTGGTAAAGTGGTCCGTCATAACTAAAACATGGTTCGATGTAAGGTAATCCATAGATACAAGT
Unaligned ( gi|11 ): ACCCTTAGATGGTTCTGACGTCTAGTAGTCCATACATTCAAGTTGCAGTGGCTGAGTAGTAGGAATACTGTCTTGCGAAGCACTTTGGTTATTAGGCTTTTTGAACTTCATAACGGTCTTCCCATGTTGCAAGGTCATGACGCATTCTTGGCCAGTAGAATCTGTCCATTACTAGTTCTACAGTTTTCTCTCTACCCGGATGCCCCATCTTATCATGAAGAAATTCCAGTGTGGTAGCTATAACTTCTGAGGAAACAAGTACCTGTTGATGTTCCCTATCC
Unaligned ( gi|14 ): CTCTGTGGATGCCTTACCCATAGGGTAGATACAGGTATCATCTAATCTTTGGGGAACTCTGCTAATCTGACACAGTTCTTTGATGAAATTTACAAGAAAGATGTGTGTCCTG
Unaligned ( gi|15 ): CTGTCATAAGTAGCACATTTTGAATTCCACTTTTTGAAGGCTCCAGAGTAAAATAGTCCATGCATACTAGTTCCAGGGGTTGAGATGTGGTGATACTTACC
Alignments
lowQualScore : 2222222 1 1 1 1 1 1 1 1 1 77777777777777 11 2222 22 1 1 44444444 1 1 2222 222 1 11 11 2222 1 11 33333333 111 11 2222 11 2222 2222 1 1 111 1 77777777777777777 1 1 1 1 11 1 11 1 1 11 2222 22222 11 22222 11 222222 1 11 11 1 1 2222222 22222 11 1 333333333333 11 1 1 1 1111 1 2222 11 1 11 11 1 2222 1 11 1 11 33333 1111 222 4444 222222 33333333333 1 11 1 1 1 1 11 1 1 1 1 1 11 333333333 22222 11 1 1 1 11 1 1 1 1 1 1 1 1 11 1 888888888888888 22 1 1 333333 1 111 11 11 11 111 11 11 1 111 11 11 1 2222 111 1 111 11 1 1 1 11 1 1 1 1 11 11 1 1 11 2222 1 1
lowQualScore : 3 8 6666666 3 3 3 6 2 3 3 3 3 0 3 7 88888888888888 88 7 2222 00 6 3 3 7 88888888 3 3 8888 333 3 88 88 8888 3 88 22222222 777 33 0000 66 3 3 33 1111 1111 3 0 0 000 3 0 00000000000000000 55 2 2 7 7 3 7 7 6 6 7 3 6 7 7 3 7 7 6 7 3 7 7 33 0 0 0 11 6 8 0 8 0 8 1 0 8 3 11 7777 6 8 3 0 0 0 8 8 00000 1 44 11 8 0 0 8 8 8 8 8 8 0 33333 8 11 5 8 8 6 8 333333 8 0 33 22 0 0 6666666 55555 55 33 0 888888888888 33 0 0 6 0 7777 1 0 1111 33 0 33 44 3 9999 3 6 0 6 44 2 6 7 0 1 88 6 33333 7777 444 7 1111 333333 6 6 7 7 44444444444 5 22 88 5 5 5 5 88 1 5 1 5 5 5 5 88 888888888 77777 88 5 5 5 88 1 5 5 5 5 5 5 5 5 88 5 1 1 0 6 6 3 7 7 7 333333333333333 6 6 55 3 3 7 888888 7 7 1 2 1 0 888 1 99 0 0 3 88 0 1 1 66 22 777 33 00 0 2 1 111 8 1 22 33 1 0 6666 0 0 1 88 222 999 0 777 33 2 6 1 5 1 5 1 5 88 6 2 2 1 1 1 0 0 0 1 22 11 33 9 0 9 9 00 0 1111 999 3 0 1 0
lowQualScore : . . ....... . . . . . . . . . . . . .............. .. . .... .. . . . . ........ . . .... ... . .. .. .... . .. ........ ... .. .... .. . . .. .... .... . . . ... . . ................. .. . . . . . . . . . . . . . . . . . . . . . . .. . . . .. . . . . . . . . . . .. .... . . . . . . . . ..... . .. .. . . . . . . . . . . ..... . .. . . . . . ...... . . .. .. . . ....... ..... .. .. . ............ .. . . . . .... . . .... .. . .. .. . .... . . . . .. . . . . . .. . ..... .... ... . .... ...... . . . . ........... . .. .. . . . . .. . . . . . . . .. ......... ..... .. . . . .. . . . . . . . . . .. . . . . . . . . . . ............... . . .. . . . ...... . . . . . . ... . .. . . . .. . . . .. .. ... .. .. . . . ... . . .. .. . . .... . . . .. ... ... . ... .. . . . . . . . . .. . . . . . . . . . . .. .. .. . . . . .. . .... ... . . . .
lowQualScore : 2 8 0000000 3 3 3 7 0 3 3 3 3 7 3 3 33333333333333 33 3 7777 77 7 3 3 3 33333333 3 3 3333 333 3 33 33 3333 3 33 33333333 555 88 8888 88 2 2 88 2222 2222 2 0 0 222 2 0 00000000000000000 88 5 5 3 3 3 3 3 7 7 3 3 7 3 3 3 3 3 7 3 3 3 3 22 0 8 8 00 0 0 8 0 8 0 4 0 0 2 00 0000 0 0 8 8 8 6 0 0 00000 0 66 22 0 8 8 0 0 0 0 0 0 8 00000 0 00 0 0 0 0 0 000000 0 0 88 55 0 0 0000000 00000 55 88 0 222222222222 88 0 0 5 0 2222 0 0 8888 88 0 88 00 3 3333 3 7 7 7 00 0 7 3 7 0 33 7 33333 0000 333 3 7777 777777 7 7 3 3 33333333333 0 00 00 0 5 5 5 00 0 5 0 0 5 5 0 55 000000000 55555 00 5 0 0 55 0 5 0 0 5 5 5 5 5 00 5 0 0 7 7 7 7 3 3 3 000000000000000 7 7 33 3 3 3 333333 3 3 2 5 0 0 000 0 00 8 8 2 88 2 0 0 55 55 555 88 88 8 5 2 000 8 0 22 88 2 0 5555 2 8 2 00 888 222 0 555 88 5 7 0 5 0 5 0 5 55 7 0 0 0 0 2 2 0 0 2 22 00 88 8 0 0 2 88 2 2222 222 2 0 0 0
consensus : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAA-CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCAA-AACCTA--AGAC---TGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAAGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
Reference ( family-5803 ) : ATGTAACAGGGTTTTATGTCGCAGATG---A---AATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACGAAAAA-CCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTTACAATGCTGAA--------------TTA--ATCCAATTCAA--T-AGACAAAA-CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AATGTCAA-AACCTA--AGAC---TGTCTCCAAAATTACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATA-----CCNAAAACAACTCACAAGACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--ANT-AAT-A-NAAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT--TGAAA-TGACTTCCACGTCATTCAAAAGAAGACTTACCCTGATGAACTCTGCAAACTTAGCGACNTTCT--AATAGCTG-----ATATATCTGCAAT-GAAATAATTAAAA----GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTNNCCATTTGCTTCAACTGACTAGCCATTCTACGTGAAGCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTNTTGGAAAACATAAACTTNCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATTGCCTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTGGTCGTGACAGATGACAAGCTATCATNTATCGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATNCTCCTATATAGCTNACACTATCCGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----AGCT-AAG-TTGCCTAGTTCCAGTTTTCTCTT-CGACCTAATTCTTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGATTCCAATGGGTAGAAGCAAATTCCNGTG-AAG-G-TTCTGGTTCTNCCTTGCCCATTTTCTCTTTG-CACCTTGTANACTGGAACNTC-GGTTGTTAGGCTGTC---CAAT--GACGATGTAGGGNTTATCCTCCCATTTATCTGCGATCCTATGCTTNCCTTCGAAACTG--ACTA-TTTTCACCAA-ACTCTGTCACCTTCCTTCAAAACNACTCCCCTTACCTT-GCTGTCGTAGTGAGA-TT---TCTGTTT--TCCTTGGGANTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGNAATTTATCGATGTANGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAGGTTGGGTTCTCTGCCGAACATCAAANAANAAGGGGAA-AACCT-GTAGNATCATGAATTGT--GCAATTGTA-TGCATGTACTAGCGGGCT--T-ATGTAGGCTTTCCAATT-TGNCT-TTGTTC
gi|1 : TAAG---ATAGTCTGT-----AAATTGC--TTATGTA-A--AACATA----CCAATCT----A-G-G-GAT---GACAGTCTCCATAATGAAAAA-TGCCGTA-----------------ATA-AATTCAGAG-CCCATGAAGAACTGCAAATTATATAATTACACT-T-AATATAATTTGTCCGTATAAAACATAACTCTTTATTAAAATCA-ATTGTGAGACAAAATATGGTTCCAAATTACTTTTATAAATAAATAACTTAAA-CACTATAAAATAATATCTGTCTCACAAATTAATCATC-TCTCTGTGCAAATACTGGCAAATTAA--ATGCAGTTTTTACAGGAGTTTTTAC-GTTTAGCTTATTAGAAATTTATA-TTAGAATTAAGTAAATAAACTTTAAACTTACCA-GGAGAAG-TA--AATCTTAATG-TCAA-ATATGTC-AAAGT--A-GA--TA--AGAC---TCTTCTCAAAATTCAAA-CTTCT--GCT-CAAAGCTGGACAT-AGATATA-----CCAAAAACAACTCACA-GACTT--GGGAGGAAAACCAGCAAAACAA-TAAA-C-ACGAGAT-A-T-CAAAAA-ACAAAACC-AAT--GAAAATAGATAACT-----AAAC-CCATGG--ACTT--CCA-TATTA-A-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCTATATACTTCAA-CGCAC--GGC--AGGT-AG-TA-----A-TGACT-----ATGG--TTAC--AT-ATC---A-----AAATCTA--GA-TA-CATGTAATTCATA-AT----ACT-AAT-A-AAATAAGAATTCCATAATTAAATTGATTTAATTAAATAAATCA--ATAAATTCATTAC-CTTACATTCTCCCCTCACTTTT--TGAAA-TGACTTCCATGTCATTCAAAAGAA-ACTTACTCTGATGAA-TCTGCAAACTTAGCAACTCTCT--AATAGCTG-----ATATA-CTGCAA---AAAAAATTAAAAA---GAAATT--AT--ACAAATTCAGGTATTATCTGATAAAA--A---TT---AAAGAGTGC-TTCGATGTCTCTTTTACCATT--CTTCAACTGACTAGCCATTCTACGTGA-GCAATCAGCTTTCTGCAACCAATTCAGGCTTCTCTTTTTCTCTGATATTGACACTTCTTGTTGTTGGAAAACATAAACTTGCCATCCAACGTGGTTTCGT-CTGG-TCGAGTTG-ATCTTCGTAGATCAACATTGCTTGTTTCCAATCCATCGTCATCATTCTCTCTATCATCGATTTTTTGATGTGTCATCAACATCAGCAGCAGCCATTTC-GCATCTGGCTCTCCGACGTTAGTA-TACTTGGTCGTGACAGATGACAAGC--TCATCTA-CGTGTTACTGGTGCTGGAATCAGGATCATCAGAT-TAACATCT-GAATCTGA-TGAGAGCGTC-TCTCCTGATCCTTTCCTCCAGGTACTCCGCACCATTCTGATCGTCACCAAGTAATGGTGG-GGTACTGTGATCCTCATCCTCAGATATTGTATG--CCTCGGGTATAGGA-ATTCTCCTATATAGCTAACACTATCTGAATCATCAGAATCCTCTGTCTGACTTTGGATTGATACTTGATCACTTAACTCAAGTTTGCCTAGTTCCAGTTTTCTCTT--GACCTAACTCTTGTGAGCTGGTACTGGG-GCTGGTAA------CTTAGATTCCAATGGGTAAAAGCAAATTCCTGTG-AAG-A-ATCCGGTTCTTCCTTGCCCATCTTCCCTTTGTCACCTTATAGACTGGAACTTT-GGTTATTAGGCTGTC---TAAT--GATGATGTAGGG-TTAT-CTTCCATTTATCT-TAAT-CTATGCTTACCTTCGAAACTG--ACTACTTTTCACCCA-ACTCTGTCACCTTCTTTCATAACG--TCCCTTTACCTT-GCTTTCATAGTGAAATTT---TCTGTTT--TCCTT-CGATTTCTTGATGGCTGTTCTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGAAATTTA-CGATGTAAGCTGAATTCGATC-AGAATGAAA--TTTGATCAATGC--AAAATTAAATCAATGGGCA-GTTGGTTTCTCTGCC-AACATCAAATAATAGGGGGGA-AACCT-GTAGAATCATGAATTGT--GCAATTGTA-TG-ATG-ACAA--GGGTT--A-ATGTA---TTTCCAA-T-TGTTTATTGTTC
gi|12 : CCTATGGGCAGAA-CAAAATCCGATG-GAGTG-TTCTGGTTCTGTCTGTTCCATTTTCTCGCTG-AACGATGAACACTGGAACATCTGG--GTTAGGTTGACGCACAATCTGA-----TAGGGTTCTTCCTCCCACTTATCTGCTATCTTGTGCTTCCCGTCGAATGTC--ACCA-CTTTCACCAAGACTCTATCCCCTTCCTGCAAATCTACTCCCCTCATTTCAG--GTCGTAG---GA-TTTGCTCTGTTT--CTCTggatcgtcagttcctagcatggaaatgagcgtcctattaaatctattctgtcaggcccgttgcccttggaagttagggagtagttctggactttgtattcctgtcatggcatagtatctctaatgatgttgctgcagaagtggctcctgacaagtgcagttttctgtggtagtccataattggcaataaagcttgaaagatagcatctgcagtggtctttgcggtttgattccttgttggcactgccactgcatactttgtgaaagatcagtcaagataaggatattttttaatgtcccttagaagttcagggtcagtatccatgcagaccatttctaatgttggaagtagtaatgtttgacgagctttgtttctggttgtaggcgtcttaaactgatgcacctctcacattggtcaatccagttagaatataccggtgcatcttaggcatagaat
gi|13 : aCATCACT---------TCCCCTC-CTTTTATTAAAAATGACTTC-ACGTCAAATAAAGGAAGACTTACCC--AGGAACT-----AGC---GCGAAATCCTGAAATA-CTGCATAAATATGT-TACAATGGAAATAA--AAAACATGGAAATTCAGT--A-AAATT----TATT-CCTG-TAAAACCATATTTTTAAAAGActtg
gi|16 : TGTAACAGGGTTTTATGTCGCAGATG---A---AATAAC
gi|2 : aacATGTAACAGGGTTTTATG------ATG---A---AATAACT-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-T-------------AATAATAGCAAACAAAACGAATAA-CCCTGAAATAAAACAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGGAAATATTACAAACAAGGGAGATAACTCTG---AAGTTTACAATGCTGAA--------------TTA--ATCCAATTCTA--T-AGACAAA--CTCTCCCT-TTA-TATTACTTTA--------TCAAAAATCA-TAA-AAAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATGCTTTA-CTTT--ATATCAAAT--TGA--TCATGAG---ATA--CTAT---TAAAAATGCATTTA-ATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAAATGCAGTA-----------------ATACAATTCAGAGGCCCATGAGAGACTGCAAATTATATAATTACACT-TTAATATAATTTGTCCGTATAAAA-ATAACTCTTTATTAAAATCATATTGTGAGACAAAATATGGT-CCAAATTACTTTTATAAATAAATAACTTATA-CACTATAA--TA-TATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTTTAGCTTATTAGAAATTTATA-TTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TCAA-ATATGTC-AAAGT-AA-AACCTATAAGGCAGTTGTCTCCAATATTACAA-CTTCTCTACTTCAAAGCTGGACAA-AGA-ATA-----CCCAAAACAACTCACAAAACTTTTGGAGGGAAAACCAGCAAACCAA-TAAAAC-ACGAGAT-A-T-CAAAAC-TAAAAACC-AATAGGAAACTAGATAACTT----AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAAGGCAACCAAT------TAGTTCGGGTA-CCTTCCGATATACTTCAA-CGCAC--GGCC-AGGT-AG-TA-----A-TGACT-----ATGGGTTTAC--AT-ATC---A-----A--TCTA--GA-TA-CATGTAATTCATA-ATGA--AAT-AAT-A--AAT--GAATTCCATAAATTAATTTATT-AATTAAATAAATCA--ATAAATTCATCACTCTTACATTCTCCCCTC-CTTTT----GAA-TGACTTCCATGTCATTCAAAAGAAGACTTACC-TGATGAATTCTGCAAACTTAGCAACCTTCT--AATAGCTG-----ATATATCT-CAAT-AAAATAATTAAAA----GAAATT--ATTTACAAATTCAGGAGTTATCTGATAAAA--A-ATTT---AAAGAGTGCCTTCGATGTCTCTTTGTCCATTTGCTTCAACTGACTAGCCATTTTAC-TGAAGCAATCAGCTTTCTGCAACCAAT-CAGGCTTCTCTTTT-CTCTGATATTGACACTT--TGTTTTTGGAAAACATAA-CTTTCCATCCAACGTGGTTTCGTCCTGGTTCGAGTTGAATCTTCGTAGATCAACATT-CCTGTTTCCA--TCATCGTCATCAT---------CATTG-----TTGATGT--CATCAACATCAGCAGCAGCCATTTCTGCATCTGGCTCTCCGACGTTAGTAGTACTTG-TCGTGACAGATGACAAGCTATCATATATTGTGTTACTGGTGCTGGAATCAGGATCATCAGATGTAACATCTGGAATCTGATTGAGAGCGTCATCTCCTGATCCTT-CCTCCAGGTACTCCGCACCATTCTGATCGTCACCA-GTAATGATGGAGGTACTGTGATCCTCATCCTCAGATATTGTATGCTCCTCGGGTATAGGATATGCTCCTATATAGCTTACACTATCTGAATCATCAGAATCCTCTGTCTGACTCTGGATGGATACTGGATC----A-CT---G-T--CCTAGTTCCAGTTTTCTTTTGTGACCTAATTCCTG-GAGCTGGTA-TGGGTGCTGGTAA------CTTAGAT-CCAATGGGTAAAAGCAAGTTCCTGTG-AAG-AATCCTGGTTCTTCCTTGCCCATTTTCTCTTTG-CACCTTGTAGACTGGAACTT--GGTTATTAGGCTGTC---TAAT--GATGATGTAGGGGTTATCTTCCCATTTATCCTTGATCTTATGCTTACCTTCGAAACTG--ACTA-TTTTCACTAACACTCTGTCACCTTCATTCAATACTGCTCCCTTTACCTT-GCTGTCATAGTGAAA-TT---TCTGTTT--TCCTTGGGAATTCTTGATGGCTGT-CTCTGCTAAATGGTAAGCATCCTTAAGTTTCTTCTGTAATTTATCGATGTACGCTGAATTCGATCTAGAATGAAAATTTTTATCAATGCCAAAAATTAAATCAATGGGCAAGTTTGGTTCTCTGCCGAACATCAAATAATAAGGGGAA-AACCT-GTTGAATCATGAATTGT--GCAATTGTA-TGCATGTACTAATGGGTT--T-ATGTAATTTTTCCAATCGTGTTT-TTGTTC
gi|3 : CATCATCCGTGTCTTCA---TCCTCTGT--------GGATGGA-AC-GGA-C----AG---AA---TGC-TA--TCCTGCTTTCTCAT-CCAACTTCTTCTTG-GTGCTGGAG-TTGGTACAGGAGAAGAAATCTTGG-TTCCAGTGGGAAGAAGCAGATTCCGATGTAAA-G-TTCTGCATCTACCTT-------CTCTCCT-G--ACTTTATATACTGGAATGTC-GAT-GTTAGGCAGTT---CCAT--GACAATGTAGGGATTATCCTCCCAACGGTCTGCAATACTATGCTTTCCTTCAAA--TGAAACAA-TTCTAAC----ACTCTGTCACCAACCTCCAAAGCAACTCCTCTTGTCTT-AATGTCGTAGTTTGA-CT---TCTGTTGAATC--TGGCTGTTTTATATGGCTGT
gi|3 : TTATCTAGTCCAAACAGCAAATCAGTAGGAAGATTGGGCTCTTGACCAAACATCAAGGAAAATGGTGAATATCCT-GTGGTTTCATG-TTTGTTGGC-ATTGTGCTG-ATGTACTAGTGGACTAATAATGTAGGCTTTCCAATT-AGACT-gttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccattatctagtccaaacagcaaatcagtaggaagattgggctcttgaccaaacatcaaggaaaatggtgaatatcctgtggtttcatgtttgttggcattgtgctgatgtactagtggactaataatgtaggctttccaattagacttctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|4 : catcatccgtgtcttcatcctctgtggatggaacggacagaatgctatcctgctttctcatccaacttcttcttggtgctggagttggtacaggagaagaaatcttggttccagtgggaagaagcagattccgatgtaaagttctgcatctaccttctctcctgactttatatactggaatgtcgatgttaggcagttccatgacaatgtagggattatcctcccaacggtctgcaatactatgctttccttcaaatgaaacaattctaacactctgtcaccaacctccaaagcaactcctcttgtcttaatgtcgtagtttgacttctgttgaatctggctgttttatatggctgtgttggcaacttcatatgcttttgtcagtcgctgtctaaggttatctacatacatatgcagtcatattccttaccttctcgccaATGTAACAGGGTTTTATGTCG-AGATG---A---AATAACAATAAGTCCTGTTCAGGGTTCGGGGACATCTCCAATTTATGTGATGTGGAATAGAAATAATAGCAAACAAAAC-AAAAA-CCCTGAAATAAA-TAATAACATATAAGTTACATTATGCCTAAAATAACAAATCACATATTACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCGA-CAAGGGAGATAACTCTATCTGAGTTCACAATGCTGAA--------------TTA--ATCCAAT-CAA--T-AGACAAAAACTCTCC-T-TTC-TATTACTTTG--------TCAAAAATCA-TAA-ACAT----ACCTAAGCA---ACATGACTAAGTGATACT-TATAAT--ATCTATG--TAG----ACATCATACTTCA-CTTT--ATATCAAAT---GA---CATGAG---ATA--CTAA---TAAAAATGCAATTATATGTA--AACATA----CCAATCT----ATG-G-GATTA-GGCAGTCTCCATAATGAAAAA-TGCAGTAGATATGGACAACGTACAATACAATTCAGAGGCC-ATGAGAGACTGCAAAT-ATA-AATTACACTCTTAATATA-TTTGTC-GTATAAAACATAACTCTATATTAAAATCATATTGTGATACAAAATATGGT-C-AAATTACTTT-ATAAA-AAATAACTTAAAACACTATAAAATAATATCTGTCTCACAAATTAATCATCCTCTCTGTGCAAATACTGGGAAATTAATAATGCAGTTTTTACAG-AGTTTTTACAGTT--GCTTATTAGAAATTTATATTTAGAATTA-GTAAATAAATGTTAAACTTACCAAGGAGAAGAGA--AGTCTTA-TG-TC-A-ATATGTC-AATTTCAA-AACCTA--AGAA---TGTCTCCAAAA-TACAA-CTTCTCTACTTCAAATCTGGACAA-AGA-ATC-----CCTAAAACAACTCAC-AGACTTTTGGAGG--AAACCAGCAAACTAA-T-AAAC-ACGAGATAA-TGCAAAAC-TAAAAACC-AATAGGAAACTAGATAACTTC---AAAC-CCATGG--ACTTGACCA-T-TTATA-CCCTAA-GCAACCAAT------TAGTTCGGGTA--CTTCCctggtcctgttgcagagttccaatcttggaaatgagtgtgcgtttgaatctttctgtaataccgttgcccagtggatgatacggggttgtcctggatttggaaattcctgttatgaataaagttcttgtataagtttactgaaaaaaatagctccttggtcggaatgaattttatttttctttgaaagtcaataagggataataaaatggttaaataaggcatcggcagttgttctagcagtctgattcttggttggaactgctatgacaaacttggtgaaatgatctgtcataagtagcacattttgaattccaccttttcaaggcttcagagtcaaatagtccatgcatactagctccaggggttgaggtgtggtgatacttaccatggaagcacgttgattgtttagggtcttaaacttctaacatatcgcaactatctatctatgtggcaataccactcctcatctttggtcaataaaatcagtcgatcactaaatattttgttctctttcttctaggatatcccattctattgtgaatatannnnnnnnnnnnnnnnnnnnnnnnnatgaagattgtctagtattcacaggtaatatgtctttgaactaccattggatgaatgtttcagtcttctctactgtgtaacatcttgtga
gi|5 : AACATCATAAAGAAAGGAGAG-AATCTTGTAGTGTTATGTGTGGT--GGTATTGTA-TGTATGGACTAGCGGTCT--T-GTGTGGGCTTTCCAGTT-TGACT-TTATT
gi|6 : tcttcccagcagtcatcacgcttgtgcattccgtcaaaggcggccactttgaataacaccctgtctccagtgcactgtgtgaattttagagtcataaagagaattttgccttgattggctaaactttgctgcagtgttggcaatgcagacttgaatcactcttcaaggttctggacatatgctaacaaactcttagtcttttcagcactgcctaacccaaatggtagattATGTAACAGGGTTTCATGTCGCAGATGTATACGTAATAACA-CAAGTCCTGTTCAGGGTTCGGG-ACATCTCCAATTTAT-TGATGTGGAATAGAAATAATAGCAAACAAAACAAAAAAACCCTGAAATAAA-CAATAACATATAAGTTAC-TTATGCCTAAAATAACAAATCACATAT-ACATTATTGATTTACATAGATCATTAGATCAATGGAAAATATTGCAA-CAAAGGAGATAACTCTATCTGAGTTTACAATGCTGAAATTGCTGAATTTATTTATTATCCAATTCAAAGTGAGACAAAA-CTCTCCCTATTAATAT-ACTTTAAATTATTGTCAAAAATCAATAATAAATTTACACCTAACCATACACATGACTAAGTGATACTGTATATTTGATCTATAGATAAGATAACATGATACTTTAACTTTTAATGTCAAATATTGAAATCATGAAGGAATA--CCATATTTAAAAATGCAATTGTATGTAGGAACATATTACCTAATTTTCTAATGCGCGATTAAGGCAGTTCCCATA-TGAAAGA-TGCAGTA-----------------AT-CAATTCAGAGGCCCATGAGAGACttaatctggttcaagtttcccagcatagagtgcaaattctgttaaatctctctgtgatgccattacccatagggtgatacgggtcaatctaaactttgagatgcctgctatctgacgcagttctttgatgaatttacaagaaaagtttgtgtcctggtcagaatgaattattttcggaagtccgtaaagggataacgaaaatattaaaagaggcatctgctgtaatctttttttttgtagggacagcaactgcaaatatggtaaaatgatccataatgatcaggataatctgtactacacccttagatggttctgaagtctagtagtccatacatacaagttgcagtggttgagtagtagaaatactgtgttggttattaggctttttgaacttcatagcggtgtgcccatgttgcaatgtcatgacgcattcttggccagtagagtc
gi|7 : TTATTAAAAAATTAT---TATAATTA-GTAAATGAATGTTAGAATTGCCAAGGAGAAAAGA--AGTCTTACTA-TCAA-ATAAGTC-AATGTCAA-ATTCTA--AGG-----GTCTCTGAGAATACAA-CCTCTCTACTTCA--TCTGGACAA-AGC-ATG-----CCTAAATCAACTCA-AAGACTT--GGAAGGAAAACCAACAAACCAA-TAAAAC-ACTAGAT-A-T-CAAAACTTAAAAACC-AATAGGAAACCATACAAGTTC---AACC-CCATGG--AGATCACCATT-TTAAA-CCCTAAGGCAACCAATTACTAGTAGTTCGGGTA-CTCCCTGATACACTTCAA-TGCAC--GGTC-AGGT-AGCTATTTTCA-TGACTGTATCATGGGTTTGC--ATGGTC---ATATATA--TATA--GA-TA-CATGTAATTTATA-ATAA--AATAAAT-ATCAAT--GAATTCTATGAATTAATTTATT-TATTAAATAAATTA--ATAAATTCATC
gi|8 : ctaacatAGGAGAAGAGATAGGTCTTA-TGGTCAATAT-TGTCTAATGTCAAGAACCTA--AGACC--TGTCTCCAAAATTACAAACTTTGCT-CTTCAAATCTGGACAATATG-ATATTTACCCAAAAACAACTCACAGGACTTTTGGAGGGAAAACCAGCAAACCAATTAAAACAACGAGAT-ATT-CAAAAC-TAAAAACCAAATAGGAAACTAGATAACTTTCAAAAACGCCATTGATACTTGACCA-T-TTATAGCCCTAAGGCAACCAAT------TAGTTCGGGTACCCTTCCGATATACTTCAATCGCACGTGGCCGAGGTAAG-TA-----ATTGACT-----ATAGGGTTACATAT-ATCAAAA-----A--TCTACTGAGTAGCATGTAATT-ATACATGAAGACT-AATAA-TAAT--GAATTCCATAAATTAATTTATT-AATTAAATAACTCAATATAAATTC
5 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GATTCTTGGTTGGAACTGCTTATGGGGCAAATTGGTGAAGATGGTCTTGTATATGACAATGAAACATTGAATTCCCCTTTGAAGGCTCCAGAGTCAAAAAAAGTTCCACGCATACTAGCTCCAGGGGTTTGGAAGCTGTGGTAGATACTTACCTGGAAGCGCGTTGATTGTTTGGGGTCTTAAACTTCAGACATCTATTCGCAGCTATCTACCCCATGTGGCAATATCACTCCTCATCTTTTGGCCATAGAACCTGTCCATCACTTAAAGATGTTGTCCTTTCTCTTCCTGGATGTCCCATTTCTATTTGTGAAGATGGTCTAGATCACAGGTACAATGTCCTTTGGAACAACCACTTGGTGATTGTTCGGTCCCATTCATCAACTTGCTGTTAACCTCTTGTGAG
Unaligned ( gi|10 ): TTTCCAGTTCGCTGTTTTAGTCGTGCTGCAGTGTTCCATCATAAAAATAAGTGCCTTGTTGAATCTTTCGGAGATGCCGCTACCCATTGCAAAGTAGGGAGTGGTACGCGATTTTGAAATTCTTGCCTAGCTACAAAATCTGTTGAAGCAGCTTTCTTGTGAAGTGGGATACTTGGTCCGAGTGAATCTTTTCTATGGAGTTCATAGGGAATCACAAAGTTGTTTAAAAATGCATCTGTCGTGGTTTTTTCAGTCTAATCTCTAGTCGGGACAGCTACAATAAACTTGGTAAAGTGGTCCGTCATAACTAAAACATGGTTCGATGTAAGGTAATCCATAGATACAAGT
Unaligned ( gi|11 ): ACCCTTAGATGGTTCTGACGTCTAGTAGTCCATACATTCAAGTTGCAGTGGCTGAGTAGTAGGAATACTGTCTTGCGAAGCACTTTGGTTATTAGGCTTTTTGAACTTCATAACGGTCTTCCCATGTTGCAAGGTCATGACGCATTCTTGGCCAGTAGAATCTGTCCATTACTAGTTCTACAGTTTTCTCTCTACCCGGATGCCCCATCTTATCATGAAGAAATTCCAGTGTGGTAGCTATAACTTCTGAGGAAACAAGTACCTGTTGATGTTCCCTATCC
Unaligned ( gi|14 ): CTCTGTGGATGCCTTACCCATAGGGTAGATACAGGTATCATCTAATCTTTGGGGAACTCTGCTAATCTGACACAGTTCTTTGATGAAATTTACAAGAAAGATGTGTGTCCTG
Unaligned ( gi|15 ): CTGTCATAAGTAGCACATTTTGAATTCCACTTTTTGAAGGCTCCAGAGTAAAATAGTCCATGCATACTAGTTCCAGGGGTTGAGATGTGGTGATACTTACC