lowQualScore : 22 1 11 44444444444444 11111 1 22 1 3333333333333333333 1111111111 33333333333333333333333333 1 1 1 333 2 1 1 333333333
lowQualScore : 7 1 77 55 4 5 5 66 00000000000000 2 6 888 88888 1 2 6 666 2 5 8 2 3 22 4 0 3 3 777 4444444444444444444 44 6666666666 3 55 88888888888888888888888888 5 3 3 6 6 6 5 6666 000 4 1 4 3 3 6 5 3 2 4 7 444444444
lowQualScore : . . .. .. . . . .. .............. . . ... ..... . . . ... . . . . . .. . . . . ... ................... .. .......... . .. .......................... . . . . . . . .... ... . . . . . . . . . . . .........
lowQualScore : 4 9 55 00 6 0 4 44 77777777777777 0 2 222 88888 5 9 1 555 1 1 5 4 6 66 6 5 1 1 777 2222222222222222222 11 5555555555 6 00 77777777777777777777777777 4 0 5 8 2 2 1 3333 222 0 6 4 7 0 0 0 1 6 6 6 555555555
consensus : TCTCTTTNTGCAG-A--TCTGCAAGTGGATATTTGGAGCGCTTTGAGG---CCTATGGTG--GAAAAGGAAATATCTTCNCGTAAAAACTA-GACAGAAGCATTCTCAGAAAC-TTCT--TTGTGATGTGTGCGTTCAACTCACAGAGTTNAACCTTCCTTTTCATAGAGCAGTTTTGAAACACT-CTTTTTGTAGAATCTGCAAGTGGATATTT----GGA---GCGCTTTGAGGCCT-TCGT---------TGGAAAAG--G--GAATA--TCTTCATNT-AAAA-C-TAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCGTTCAACTCACAGAGTTNA--ACCTTC-CTTTTCATAGAGCAGTTTNGAAACACTCTTTTTGTAGNATCTGCAAGTGGATATTTGGAGCGCTTTGAGG
Reference ( gi|1 ) : TCTTTTTCTGCA--A--TTTGCAAGTGGAGACTTCAAGCGCTTTGAGG---CCAAAGGCA--GAAAAGGAAATATCTTCGTATAAAAACCC-GACAGAATCATTCTCAGAAAC-TGCT--CTGTGATGTGTGCGTTCAACTCACAGAGTTTAACTTTTCTTTTCATTCAGCAGTTTGGAAACACT-CTGTTTGTAAAGTCTGCAAGTGGATATCT----TGG---CCTCTTAGAGGCCT-TCGT---------TGGAAACG--G--G--TT--TTTTCATGT-AAGG-T-TAGACAGAGGAATTCCCAGTAAC-TTCCTTGTGTTGTGTGCATTCAACTCACAGAGTTGA--ATGATT-CTTTACACAGAGCAGATTTGAGACACTCTTTTGGTGGAATTTGTAAGTGGAGAATTCAGCCGCTTTGAGG
gi|5 : TCTTTTT--ACAGTA--TCTGCAAATGGCTATTTGGAGAGCTTTGAGG---CCTATGGTG--GAAAAGGAAATCTCTTCCCATAAAAAC
gi|7 : ttgtgacgtgtgcattcaactcatggagttcaacctttcttttgattcagcagtttggaaacagTCTTTTTGTAGA--C--TCTGCAAGTGGATATTTGGAGCGCTTTGAAG---Ct
gi|16 : aagtagacagaagtgttctcagaaacttcattttgatgggtgcattccactaacaaagtacaaccttacttttatagagcagttttgaaacagTCTTTTTGTGGC--A--TTTGCAAGTGGATATTTGGATAGCTTTGAGG---
gi|2 : gtgtgtactcaactaacagagttgaaccttccttttcacagagcagtttggaaacacCTCTGTCTGTA--AAGTCTGCAAGTGATTAGTTAGACCCCTTTGAGG---CCTTCGTTG--GAAGCGGGATT-TCT-CATTTACTG-CTA-GACAGAAGAATTCTCAGTAAA-TCCT--TTGTGTTGTGTGTATTCAAC
gi|8 : tacacagaagcattctcagaaactgctttgtcatctgtgcgttcagttcacagagtttcacctttctcttcatagagcagtttggaaagaCTTTTTATAGA--A--TCTGCAAGTGGATATTTGAAGCGCTTTGAGG---CCTATTGTG--CAAAAGAAAATATATTCACATAAAAACTA-CACAGAAACATTCTCAGAAAC-TTCT--TTGTGATGTGTGC
gi|6 : gcaaacaccCTCTCTTTGCAGTA--TCTGGAAGTGGACATTTGAAGCGGTTTCAGG---CCTATGTTG--AAAAAGGA
gi|11 : ttctcagaaacttctttgggatgtttgcattgacgtcacagaggagaacatgccctttcgtagagaaggtttgaaacaCTCTTTCTGCAGTA--TCTGGAAGTGGACATTTCGAGCGCTTTCAGG---CCTATGGTG--AAAAAGGA
gi|13 : tttgcgtttaagtcacagagttgaacgttccctttcatagagcaggtttcaaaccTCTTTCTGTAGAA--TCTGCAAGTGGTTACTTGGAGACCTTTGTGG---AAGATGGTG--GAAAAGGAAATGTCTTCCCGTAAAAACTA-CACAGATGCATTCTGAG
gi|4 : cagtttttaaagtgTTTTGCAGAA--TCTGCTTGAGGATATTTGGAGCTCTTTCAGG------AATTCGTTGCCAACGGGATATCT--GCACAAAA--TT-GACAGAAGCATTCTCAGAAACTTTTT--TTGGGATGTGTG
gi|9 : ctttccttttgatagagctgtcttgaaatcctgcA--A--TCTGCAAGTGGATATTTGGATAGCTTCGAGGATTTC---GTTG--GAAACGGGAATATCCTCATTTAAAATCTA-GACGGAAGCATTCTCAGAACC-TGCT--TTGTGATGTTTGCATTCAACTCACAGA
gi|10 : --TCTGCAAGTGGACATTTGGAGCGCTTT
gi|15 : gcattctcagaaacttctctgtgatgtttgtgttcaactcccagagtttcacattgcttttcatagagtagttctgaaacatgcttttcgtagtgGGATATTTGGAGCGCTTTGAGG---CCTATGGTA--GAAAAAGAAATATCTGCCTCTAAAAACCA-GACAGAAGCATTCCGAGAAAC-TTCT--TTGTGATGTTTGCATTCAc
gi|17 : GGGAATATCTTCATATAAAATCTA-GACAAAAGCATTCTCAGAATC-TTCT--TTGTGATGTTTGCAT
gi|3 : ggatatttggagacctttgaaaatttcgttggacacAACCTAGACAGAAGCATTCTCAGAA---TGTTTCCTGTGATGACTGCATTCAACTCACAGAGGTGAACAATCCTGCTGATGGAGCAGTTTTGAAACTCT-CTTTCTTTGGATTCTGCAAGTGGATATGT----GGA---CCTCTGTGAAGATT-TCGT---------TGGAAACG--G--G--TTCATCTTCA
gi|2 : -GACAGAGTCTTTCC---AAAC-TGCT--CTATGAcagaaaaactaaa
gi|12 : tacacagaagcattctcagaaactgctttgtcatctgtgcgttcagttcacagagtttcacctttctct-GACAAACTCGTTCCCAGACAC-TGCG--TAGTGATGTGTGTGTTTAACTCACAGAGTTTAACCTTTCTTTTCATACAGCATTCTGGAAACCCT-CTGTTTGTAAAGTCTGCAAGTGGATAtgtaaagtctgcaagtgattagttagacccctttgaggccttcgttggaagcgggatttctcatttactgctagacagaagaattctcagtaaatcctttgtgttgtgtgtattcaac
gi|7 : -GACAGAAGTGTTCTCAGAAAC-TTCA--TTTTGATGGGTGCATTCCACTAACAAAGTACAACCTTACTTTT-ATAGAGCAGTTTTGAAACAGT-CTTTTTGTAGACTCTGCAAGTGGATATTT----GGA---GCGCTTTGAAGC
gi|2 : aagtaACAGAAGCATTCTCAGAAAC-TGCT--TTGTCATCTGTGCGTTCAGTTCACAGAGTTTCACCTTTCTCTTCATAGAGCAGTTTGGAAAGACT-CTGTCTGTAAAGTCTGCAAGTGATTAGTT----AGA---CCCCTTTGAGGCCT-TCGT---------TGGAAGCG--G--G--AT--TTCTCATTT-ACTG-C-TAGACAGAAGAATTCTCAGTAAA-TCCTTTGTGTTGTGTGTATTCAAC
gi|14 : tacACAGAGGCATTCTCAGAAAC-TTCT--TTGTAATGTGTGTCCTCAACTAACAGTGTACAACCTATCTTTTGATACAGCACGTTGGAAACACT-CTTTTTATAGAATCTGCA
gi|10 : CATTCTCAGAAAC-TTCT--CTGTGATGTTTGTGTTCAACTCCCAGAGTTTCACATTGCTTTTCATAGAGTAGTTCTGAAACATG-CTTTTCGTAGTGTCTGCAAGTGGACAT-T----TGG---
gi|6 : gTTCTCAGAAAC-TTCT--TTGGGATGTTTGCATTGACGTCACAGAGGAGAACATGCCCTTTCGTAGAGAAGGTTTGAAACACT-CTCTTTGCAGTATCTGGAAGTGGACATTTGAAGCGG---TTTC----AGGCCT-ATGT---------TGAAAAAG--G--agcgctttc
gi|5 : TGTGACGTGTGCATTCAACTCATGGAGTTCAACCTTTCTTTTGATTCAGCAGTTTGGAAACAGT-CTTTTTACAGTATCTGCAAATGGCTATTT----GGA---GAGCTTTGAGGCCT-ATGG---------TGGAAAAG--G--a
gi|16 : tGTGTGTACTCAACTAACAGAGTTGAACCTTCCTTTTCACAGAGCAGTTTGGAAACACT-CTTTTTGTGGCATTTGCAAGTGGATAT-T----TGG---aaatctcttcccataaaaact
gi|11 : TGCGTTTAAGTCACAGAGTTGAACGTTCCCTTTCATAGAGCAGGTTTCAAACCCT-CTTTCTGCAGTATCTGGAAGTGGACATTT----CGA---GCGCTTTCAGGCCT-ATGG---------TGAAAAAG--G--atagctttgagg
gi|4 : ttCTTTCCTTTTGATAGAGCTGTCTTGAAATCCTGCT-TTTGCAGAATCTGCTTGAGGATATTT----GGA---GCTCTTTCAGGAAT-TCGT---------TGCCAACG--G--GA-TA--TCTGCA--C-AAAA-T-T-GACAGAAGCATTCTCAGAAACTTTTTTTGGGATGTGTGa
gi|13 : CAGTTTTTAAAGTGT-CTTTCTGTAGAATCTGCAAGTGGTTA----------------CTTGGAGACCT-TTGTGGAAGATGGTGGAAAAG--GAAA--TG--TCTTCCCGTAAAAA-C-TACACAGATGCATTC
gi|8 : AAACACC-CTTTTTATAGAATCTGCAAGTGGATATTT----GAA---GCGCTTTGAGGCCTATTG----------TGCAAAAGAAA--A--TA--TATTCACATAAAAA-C-TACACAGAAACATTCTCAGAAAC-TTCTTTGTGATGTGTGCtgag
gi|9 : gcAATCTGCAAGTGGATATTT----GGA---TAGCTTCGAGGATT-TCGT---------TGGAAACG--G--GAATA--TCCTCATTT-AAAA-TCTAGACGGAAGCATTCTCAGAACC-TGCTTTGTGATGTTTGCATTCAACTCACAGA
gi|15 : GGATATTT----GGA---GCGCTTTGAGGCCT-ATGG---------TAGAAAAA--G--AAATA--TCTGCCTCT-AAAAAC-CAGACAGAAGCATTCCGAGAAAC-TTCTTTGTGATGTTTGCATTCA
gi|17 : GGATAT-T----TGGAGACCTTT--GAAAATT-TCGT---------TGGACACG--G--GAATA--TCTTCATAT-AAAA-TCTAGACAAAAGCATTCTCAGAATC-TTCTTTGTGATGTTTGCAT
gi|2 : -TACACAGAAGCATTCTCAGAAAC-TGCTTTGTCATCTGTGCGTTCAGTTCACAGAGTTTC--ACCTTT-CTCTTCATAGAGCAGTTTGGAAAGACTCTGTCTGTAAAGTCTGCAAGTGATTAGTTAGACCCCTTTGAGG
gi|3 : -TAGACAGAAGCATTCTCAG-AATGTTTCCTGTGATGACTGCATTCAACTCACAGAGGTGA--ACAATC-CTGCTGATGGAGCAGTTTTGAAACTCTCTTTCTTTGGATTCTGCAAGTGGAccttcgttggaagcgggatttctcatttactgctagacagaagaattctcagtaaatcctttgtgttgtgtgtattcaac
gi|7 : aacc-TAGACAGAAGTGTTCTCAGAAAC-TTCATTTTGATGGGTGCATTCCACTAACAAAGTACA--ACCTTA-CTTT-TATAGAGCAGTTTTGAAACAGTCTTTTTGTAGACTCTGCAAGTGGATATTTGGAGCGCTTTGAAGtatgtggacctctgtgaagatttcgttggaaacgggttcatcttcacagaaaaactaaa
gi|14 : aagACAGAGGCATTCTCAGAAAC-TTCTTTGTAATGTGTGTCCTCAACTAACAGTGTACA--ACCTAT-CTTTTGATACAGCACGTTGGAAACACTCTTTTTATAGAATCTGCAc
gi|10 : ATTCTCAGAAAC-TTCTCTGTGATGTTTGTGTTCAACTCCCAGAGTTTC--AC-ATTGCTTTTCATAGAGTAGTTCTGAAACATGCTTTTCGTAGTGTCTGCAAGTGGACATTTGGAGCGCTTT
gi|12 : gcTTCCCAGACAC-TGCGTAGTGATGTGTGTGTTTAACTCACAGAGTTTA--ACCTTT-CTTTTCATACAGCATTCTGGAAACCCTCTGTTTGTAAAGTCTGCAAGTGGAc
gi|6 : gacaaactcgTTCTCAGAAAC-TTCTTTGGGATGTTTGCATTGACGTCACAGAGGAGAACATG-CC-CTTT-CGTAGAGAAGGTTTGAAACACTCTCTTTGCAGTATCTGGAAGTGGACATTTGAAGCGGTTTCAGGta
gi|5 : TTGTGACGTGTGCATTCAACTCATGGAGTTCA--ACCTTT-CTTTTGATTCAGCAGTTTGGAAACAGTCTTTTTACAGTATCTGCAAATGGCTATTTGGAGAGCTTTGAGGcctatgttgaaaaagga
gi|16 : GTGTGTACTCAACTAACAGAGTTGA--ACCTTC-CTTTTCACAGAGCAGTTTGGAAACACTCTTTTTGTGGCATTTGCAAGTGGATATTTGGATAGCTTTGAGGcctatggtggaaaaggaaatctcttcccataaaaact
gi|11 : TGCGTTTAAGTCACAGAGTTGA--ACGTTC-CCTTTCATAGAGCAGGTTTCAAACCCTCTTTCTGCAGTATCTGGAAGTGGACATTTCGAGCGCTTTCAGG
gi|8 : ttAAACACCCTTTTTATAGAATCTGCAAGTGGATATTTGAAGCGCTTTGAGGcctatggtgaaaaagga
Alignments
lowQualScore : 222 1 1111 1
lowQualScore : 1 666 1 7 0 555 0 1 3 5 1 4 0 5 2 0 1111 0 4 3 1 4 1 1 1 55
lowQualScore : . ... . . . ... . . . . . . . . . . .... . . . . . . . . ..
lowQualScore : 0 000 0 7 7 333 7 0 4 6 4 0 7 4 6 5 4444 0 4 1 0 6 0 0 2 00
consensus : TCTCTTTCTGCAGAATCTGCAAGTGGATACTTGGAGCGCTTTGAGGCCGATGGTAGAAAAGGAAATATCTTCCTNTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCGTTCAACTCACAGAGTTNAACNTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGCAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAACGGGAATATCTTCACGT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCGTTCAACTCACAGAGTTNAACCTTTCTTTTCATAGAGCAGTTTNGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGANNGCTTTGAGG
Reference ( family-4391 ) : TCTCTTTNTGCAGA-TCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCTATGGTGGAAAAGGAAATATCTTCNCGTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCGTTCAACTCACAGAGTTNAACCTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAAAGGGAATATCTTCATNT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCGTTCAACTCACAGAGTTNAACCTTCCTTTTCATAGAGCAGTTTNGAAACACTCTTTTTGTAGNATCTGCAAGTGGATATTTGGAGCGCTTTGAGG
gi|1 : TCTTTTTCTGCA-A-TTTGCAAGTGGAGACTTCAAGCGCTTTGAGGCCAAAGGCAGAAAAGGAAATATCTTCGTATAAAAACCCGACAGAATCATTCTCAGAAACTGCTCTGTGATGTGTGCGTTCAACTCACAGAGTTTAACTTTTCTTTTCATTCAGCAGTTTGGAAACACTCTGTTTGTAAAGTCTGCAAGTGGATATCTTGGCCTCTTAGAGGCCT-TCGTTGGAAACGGG--TTTTTTCATGT-AAGG-TTAGACAGAGGAATTCCCAGTAAC-TTCCTTGTGTTGTGTGCATTCAACTCACAGAGTTGAATGATTCTTTACACAGAGCAGATTTGAGACACTCTTTTGGTGGAATTTGTAAGTGGAGAATTCAGCCGCTTTGAGG
gi|10 : GCATTCTCAGAAAC-TTCTCTGTGATGTTTGTGTTCAACTCCCAGAGTTTCACATTGCTTTTCATAGAGTAGTTCTGAAACATGCTTTTCGTAGTGTCTGCAAGTGGACATTTGGAGCGCTTT
gi|11 : TGCGTTTAAGTCACAGAGTTGAACGTTCCCTTTCATAGAGCAGGTTTCAAACCCTCTTTCTGCAGTATCTGGAAGTGGACATTTCGAGCGCTTTCAGGCCT-ATGGTGAAAAAGGc
gi|12 : ttGACAAACTCGTTCCCAGACAC-TGCGTAGTGATGTGTGTGTTTAACTCACAGAGTTTAACCTTTCTTTTCATACAGCATTCTGGAAACCCTCTGTTTGTAAAGTCTGCAAGTGGATAa
gi|13 : CAGTTTTTAAAGTGTCTTTCTGTAGAATCTGCAAGTGGTTACTTGGAGACCTTTGTGG
gi|13 : TCTTTCTGTAGAATCTGCAAGTGGTTACTTGGAGACCTTTGTGGAAGATGGTGGAAAAGGAAATGTCTTCCCGTAAAAACTACACAGATGCATTCTGAGaagatggtggaaaaggaaatgtcttcccgtaaaaactacacagatgcattctgag
gi|14 : cagtttttaaagtgACAGAGGCATTCTCAGAAAC-TTCTTTGTAATGTGTGTCCTCAACTAACAGTGTACAACCTATCTTTTGATACAGCACGTTGGAAACACTCTTTTTATAGAATCTGCA
gi|15 : GGATATTTGGAGCGCTTTGAGGCCTATGGTAGAAAAAGAAATATCTGCCTCTAAAAACCAGACAGAAGCATTCCGAGAAACTTCTTTGTGATGTTTGCATTCA
gi|16 : GTGTGTACTCAACTAACAGAGTTGAACCTTCCTTTTCACAGAGCAGTTTGGAAACACTCTTTTTGTGGCATTTGCAAGTGGATATTTGGATAGCTTTGAGG
gi|17 : GGATATTTGGAGACCTTTGAAAATT-TCGTTGGACACGGGAATATCTTCATAT-AAAATCTAGACAAAAGCATTCTCAGAATC-TTCTTTGTGATGTTTGCAT
gi|2 : TACACAGAAGCATTCTCAGAAACTGCTTTGTCATCTGTGCGTTCAGTTCACAGAGTTTCACCTTTCTCTTCATAGAGCAGTTTGGAAAGACTCTGTCTGTAAAGTCTGCAAGTGATTAGTTAGACCCCTTTGAGGCCT-TCGTTGGAAGCGGG-ATTTC-TCATTT-ACTG-CTAGACAGAAGAATTCTCAGTAAA-TCCTTTGTGTTGTGTGTATTCAAC
gi|3 : AACCTAGACAGAAGCATTCTCAGAATGTTTCCTGTGATGACTGCATTCAACTCACAGAGGTGAACAATCCTGCTGATGGAGCAGTTTTGAAACTCTCTTTCTTTGGATTCTGCAAGTGGATATGTGGACCTCTGTGAAGATT-TCGTTGGAAACGGGTTCATCTTCACAGAAAAA-CTAAA
gi|4 : CTTTCCTTTTGATAGAGCTGTCTTGAAATCCTGCTTTTGCAGAATCTGCTTGAGGATATTTGGAGCTCTTTCAGGAAT-TCGTTGCCAACGGG-ATATCTGCA--C-AAAA-TT-GACAGAAGCATTCTCAGAAACTTTTTTTGGGATGTGTG
gi|5 : TTGTGACGTGTGCATTCAACTCATGGAGTTCAACCTTTCTTTTGATTCAGCAGTTTGGAAACAGTCTTTTTACAGTATCTGCAAATGGCTATTTGGAGAGCTTTGAGGCCT-ATGGTGGAAAAGGAAATCTCTTCCCAT-AAAA-
gi|6 : TTCTCAGAAACTTCTTTGGGATGTTTGCATTGACGTCACAGAGGAGAACATGCCCTTTCGTAGAGAAGGTTTGAAACACTCTCTTTGCAGTATCTGGAAGTGGACATTTGAAGCGGTTTCAGGCCT-ATGTTGAAAAAGGact
gi|7 : AAGTAGACAGAAGTGTTCTCAGAAACTTCATTTTGATGGGTGCATTCCACTAACAAAGTACAACCTTACTTTT-ATAGAGCAGTTTTGAAACAGTCTTTTTGTAGACTCTGCAAGTGGATATTTGGAGCGCTTTGAAGCa
gi|8 : AAACACCCTTTTTATAGAATCTGCAAGTGGATATTTGAAGCGCTTTGAGGCCTATTG-TGCAAAAGAAAATATATTCACATAAAAA-CTACACAGAAACATTCTCAGAAAC-TTCTTTGTGATGTGTGC
gi|9 : gcAATCTGCAAGTGGATATTTGGATAGCTTCGAGGATT-TCGTTGGAAACGGGAATATCCTCATTT-AAAATCTAGACGGAAGCATTCTCAGAACC-TGCTTTGTGATGTTTGCATTCAACTCACAGA
Alignments
lowQualScore : 11 1 1111 1
lowQualScore : 88 3 1 2 1 1 0 3 0 0 4 0 2 0 5555 0 5 5 1 2 1 1 1 4 22
lowQualScore : .. . . . . . . . . . . . . . .... . . . . . . . . . ..
lowQualScore : 00 7 0 5 0 0 9 9 5 4 0 7 6 5 8888 0 0 0 0 5 0 0 0 7 00
consensus : TCTCTTTCTGCAGAATCTGCAAGTGGATACTTGGAGCGCTTTGAGGCCGATGGTAGAAAAGGAAATATCTTCCTNTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTNTGCGTTCAACTCACAGAGTTNAACNTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAACGGGAATATCTTCAC-GT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCATTCAACTCACAGAGTTNAACCTTTCTTTTCACANAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATANTTGGANAGCTTTGAGG
Reference ( family-4391 ) : TCTCTTTCTGCAGAATCTGCAAGTGGATACTTGGAGCGCTTTGAGGCCGATGGTAGAAAAGGAAATATCTTCCTNTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCGTTCAACTCACAGAGTTNAACNTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGCAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAACGGGAATATCTTCAC-GT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCGTTCAACTCACAGAGTTNAACCTTTCTTTTCATAGAGCAGTTTNGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGANNGCTTTGAGG
gi|1 : TCTTTTTCTGCA--ATTTGCAAGTGGAGACTTCAAGCGCTTTGAGGCCAAAGGCAGAAAAGGAAATATCTTCGTATAAAAACCCGACAGAATCATTCTCAGAAACTGCTCTGTGATGTGTGCGTTCAACTCACAGAGTTTAACTTTTCTTTTCATTCAGCAGTTTGGAAACACTCTGTTTGTAAAGTCTGCAAGTGGATATCTTGGCCTCTTAGAGGCCT-TCGTTGGAAACGGG--TTTTTTCAT-GT-AAGG-TTAGACAGAGGAATTCCCAGTAAC-TTCCTTGTGTTGTGTGCATTCAACTCACAGAGTTGAATGATTCTTTACACAGAGCAGATTTGAGACACTCTTTTGGTGGAATTTGTAAGTGGAGAATTCAGCCGCTTTGAGG
gi|10 : GCATTCTCAGAAACTTCTCTGTGATGTTTGTGTTCAACTCCCAGAGTTTCACATTGCTTTTCATAGAGTAGTTCTGAAACATGCTTTTCGTAGTGTCTGCAAGTGGACATTTGGAGCGCTTT
gi|11 : TGCGTTTAAGTCACAGAGTTGAACGTTCCCTTTCATAGAGCAGGTTTCAAACCCTCTTTCTGCAGTATCTGGAAGTGGACATTTCGAGCGCTTTCAGGCCT-ATGGTGAAAAAGGc
gi|12 : ttGACAAACTCGTTCCCAGACAC-TGCGTAGTGATGTGTGTGTTTAACTCACAGAGTTTAACCTTTCTTTTCATACAGCATTCTGGAAACCCTCTGTTTGTAAAGTCTGCAAGTGGATAa
gi|13 : CAGTTTTTAAAGTGTCTTTCTGTAGAATCTGCAAGTGGTTACTTGGAGACCTTTGTGG
gi|13 : TCTTTCTGTAGAATCTGCAAGTGGTTACTTGGAGACCTTTGTGGAAGATGGTGGAAAAGGAAATGTCTTCCCGTAAAAACTACACAGATGCATTCTGAGaagatggtggaaaaggaaatgtcttcccgtaaaaactacacagatgcattctgag
gi|14 : cagtttttaaagtgACAGAGGCATTCTCAGAAAC-TTCTTTGTAATGTGTGTCCTCAACTAACAGTGTACAACCTATCTTTTGATACAGCACGTTGGAAACACTCTTTTTATAGAATCTGCA
gi|15 : GGATATTTGGAGCGCTTTGAGGCCTATGGTAGAAAAAGAAATATCTGCCTCTAAAAACCAGACAGAAGCATTCCGAGAAACTTCTTTGTGATGTTTGCATTCA
gi|16 : GTGTGTACTCAACTAACAGAGTTGAACCTTCCTTTTCACAGAGCAGTTTGGAAACACTCTTTTTGTGGCATTTGCAAGTGGATATTTGGATAGCTTTGAGG
gi|17 : GGATATTTGGAGACCTTTGAAAATT-TCGTTGGACACGGGAATATCTTCAT-AT-AAAATCTAGACAAAAGCATTCTCAGAATC-TTCTTTGTGATGTTTGCAT
gi|2 : TACACAGAAGCATTCTCAGAAACTGCTTTGTCATCTGTGCGTTCAGTTCACAGAGTTTCACCTTTCTCTTCATAGAGCAGTTTGGAAAGACTCTGTCTGTAAAGTCTGCAAGTGATTAGTTAGACCCCTTTGAGGCCT-TCGTTGGAAGCGGG-ATTTC-TCAT-TT-ACTG-CTAGACAGAAGAATTCTCAGTAAA-TCCTTTGTGTTGTGTGTATTCAAC
gi|3 : AACCTAGACAGAAGCATTCTCAGAATGTTTCCTGTGATGACTGCATTCAACTCACAGAGGTGAACAATCCTGCTGATGGAGCAGTTTTGAAACTCTCTTTCTTTGGATTCTGCAAGTGGATATGTGGACCTCTGTGAAGATT-TCGTTGGAAACGGGTTCATCTTCACAGA-AAAA-CTAAA
gi|4 : CTTTCCTTTTGATAGAGCTGTCTTGAAATCCTGCTTTTGCAGAATCTGCTTGAGGATATTTGGAGCTCTTTCAGGAAT-TCGTTGCCAACGGG-ATATCTGCAC----AAAA-TT-GACAGAAGCATTCTCAGAAACTTTTTTTGGGATGTGTG
gi|5 : TTGTGACGTGTGCATTCAACTCATGGAGTTCAACCTTTCTTTTGATTCAGCAGTTTGGAAACAGTCTTTTTACAGTATCTGCAAATGGCTATTTGGAGAGCTTTGAGGCCT-ATGGTGGAAAAGGAAATCTCTTCCC-AT-AAAA-
gi|6 : TTCTCAGAAACTTCTTTGGGATGTTTGCATTGACGTCACAGAGGAGAACATGCCCTTTCGTAGAGAAGGTTTGAAACACTCTCTTTGCAGTATCTGGAAGTGGACATTTGAAGCGGTTTCAGGCCT-ATGTTGAAAAAGGact
gi|7 : AAGTAGACAGAAGTGTTCTCAGAAACTTCATTTTGATGGGTGCATTCCACTAACAAAGTACAACCTTACTTTT-ATAGAGCAGTTTTGAAACAGTCTTTTTGTAGACTCTGCAAGTGGATATTTGGAGCGCTTTGAAGCa
gi|8 : AAACACCCTTTTTATAGAATCTGCAAGTGGATATTTGAAGCGCTTTGAGGCCTATTG-TGCAAAAGAAAATATATTCAC-ATAAAAA-CTACACAGAAACATTCTCAGAAAC-TTCTTTGTGATGTGTGC
gi|9 : gcAATCTGCAAGTGGATATTTGGATAGCTTCGAGGATT-TCGTTGGAAACGGGAATATCCTCAT-TT-AAAATCTAGACGGAAGCATTCTCAGAACC-TGCTTTGTGATGTTTGCATTCAACTCACAGA
Alignments
lowQualScore : 11 1 1111 1
lowQualScore : 88 3 1 1 1 1 0 3 0 0 4 0 2 0 5555 0 5 1 1 1 1 1 1
lowQualScore : .. . . . . . . . . . . . . . .... . . . . . . . .
lowQualScore : 00 7 0 0 0 0 9 9 5 4 0 7 6 5 8888 0 0 0 0 0 0 0 0
consensus : TCTCTTTCTGCAGAATCTGCAAGTGGATACTTGGAGCGCTTTGAGGCCGATGGTAGAAAAGGAAATATCTTCCTNTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTNTGCGTTCAACTCACAGAGTTNAACNTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAACGGGAATATCTTCAC-GT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCATTCAACTCACAGAGTTNAACCTTTCTTTTCACANAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATANTTGGANAGCTTTGAGG
Reference ( family-4391 ) : TCTCTTTCTGCAGAATCTGCAAGTGGATACTTGGAGCGCTTTGAGGCCGATGGTAGAAAAGGAAATATCTTCCTNTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTNTGCGTTCAACTCACAGAGTTNAACNTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAACGGGAATATCTTCAC-GT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCATTCAACTCACAGAGTTNAACCTTTCTTTTCACANAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATANTTGGANAGCTTTGAGG
gi|1 : TCTTTTTCTGCA--ATTTGCAAGTGGAGACTTCAAGCGCTTTGAGGCCAAAGGCAGAAAAGGAAATATCTTCGTATAAAAACCCGACAGAATCATTCTCAGAAACTGCTCTGTGATGTGTGCGTTCAACTCACAGAGTTTAACTTTTCTTTTCATTCAGCAGTTTGGAAACACTCTGTTTGTAAAGTCTGCAAGTGGATATCTTGGCCTCTTAGAGGCCT-TCGTTGGAAACGGG--TTTTTTCAT-GT-AAGG-TTAGACAGAGGAATTCCCAGTAAC-TTCCTTGTGTTGTGTGCATTCAACTCACAGAGTTGAATGATTCTTTACACAGAGCAGATTTGAGACACTCTTTTGGTGGAATTTGTAAGTGGAGAATTCAGCCGCTTTGAGG
gi|10 : GCATTCTCAGAAACTTCTCTGTGATGTTTGTGTTCAACTCCCAGAGTTTCACATTGCTTTTCATAGAGTAGTTCTGAAACATGCTTTTCGTAGTGTCTGCAAGTGGACATTTGGAGCGCTTT
gi|11 : TTTGCGTTTAAGTCACAGAGTTGAACGTTCCCTTTCATAGAGCAGGTTTCAAACCCTCTTTCTGCAGTATCTGGAAGTGGACATTTCGAGCGCTTTCAGGCCT-ATGGTGAAAAAGGc
gi|12 : GACAAACTCGTTCCCAGACAC-TGCGTAGTGATGTGTGTGTTTAACTCACAGAGTTTAACCTTTCTTTTCATACAGCATTCTGGAAACCCTCTGTTTGTAAAGTCTGCAAGTGGATAa
gi|13 : CAGTTTTTAAAGTGTCTTTCTGTAGAATCTGCAAGTGGTTACTTGGAGACCTTTGTGG
gi|13 : TCTTTCTGTAGAATCTGCAAGTGGTTACTTGGAGACCTTTGTGGAAGATGGTGGAAAAGGAAATGTCTTCCCGTAAAAACTACACAGATGCATTCTGAGaagatggtggaaaaggaaatgtcttcccgtaaaaactacacagatgcattctgag
gi|14 : cagtttttaaagtgACAGAGGCATTCTCAGAAAC-TTCTTTGTAATGTGTGTCCTCAACTAACAGTGTACAACCTATCTTTTGATACAGCACGTTGGAAACACTCTTTTTATAGAATCTGCA
gi|15 : GGATATTTGGAGCGCTTTGAGGCCTATGGTAGAAAAAGAAATATCTGCCTCTAAAAACCAGACAGAAGCATTCCGAGAAACTTCTTTGTGATGTTTGCATTCA
gi|16 : GTGTGTACTCAACTAACAGAGTTGAACCTTCCTTTTCACAGAGCAGTTTGGAAACACTCTTTTTGTGGCATTTGCAAGTGGATATTTGGATAGCTTTGAGG
gi|17 : GGATATTTGGAGACCTTTGAAAATT-TCGTTGGACACGGGAATATCTTCAT-AT-AAAATCTAGACAAAAGCATTCTCAGAATC-TTCTTTGTGATGTTTGCAT
gi|2 : TACACAGAAGCATTCTCAGAAACTGCTTTGTCATCTGTGCGTTCAGTTCACAGAGTTTCACCTTTCTCTTCATAGAGCAGTTTGGAAAGACTCTGTCTGTAAAGTCTGCAAGTGATTAGTTAGACCCCTTTGAGGCCT-TCGTTGGAAGCGGG-ATTTC-TCAT-TT-ACTG-CTAGACAGAAGAATTCTCAGTAAA-TCCTTTGTGTTGTGTGTATTCAAC
gi|3 : AACCTAGACAGAAGCATTCTCAGAATGTTTCCTGTGATGACTGCATTCAACTCACAGAGGTGAACAATCCTGCTGATGGAGCAGTTTTGAAACTCTCTTTCTTTGGATTCTGCAAGTGGATATGTGGACCTCTGTGAAGATT-TCGTTGGAAACGGGTTCATCTTCACAGA-AAAA-CTAAA
gi|4 : CTTTCCTTTTGATAGAGCTGTCTTGAAATCCTGCTTTTGCAGAATCTGCTTGAGGATATTTGGAGCTCTTTCAGGAAT-TCGTTGCCAACGGG-ATATCTGCAC----AAAA-TT-GACAGAAGCATTCTCAGAAACTTTTTTTGGGATGTGTG
gi|5 : TTGTGACGTGTGCATTCAACTCATGGAGTTCAACCTTTCTTTTGATTCAGCAGTTTGGAAACAGTCTTTTTACAGTATCTGCAAATGGCTATTTGGAGAGCTTTGAGGCCT-ATGGTGGAAAAGGAAATCTCTTCCC-AT-AAAA-
gi|6 : TTCTCAGAAACTTCTTTGGGATGTTTGCATTGACGTCACAGAGGAGAACATGCCCTTTCGTAGAGAAGGTTTGAAACACTCTCTTTGCAGTATCTGGAAGTGGACATTTGAAGCGGTTTCAGGCCT-ATGTTGAAAAAGGact
gi|7 : AAGTAGACAGAAGTGTTCTCAGAAACTTCATTTTGATGGGTGCATTCCACTAACAAAGTACAACCTTACTTTT-ATAGAGCAGTTTTGAAACAGTCTTTTTGTAGACTCTGCAAGTGGATATTTGGAGCGCTTTGAAGCa
gi|8 : AAACACCCTTTTTATAGAATCTGCAAGTGGATATTTGAAGCGCTTTGAGGCCTATTG-TGCAAAAGAAAATATATTCAC-ATAAAAA-CTACACAGAAACATTCTCAGAAAC-TTCTTTGTGATGTGTGC
gi|9 : gcAATCTGCAAGTGGATATTTGGATAGCTTCGAGGATT-TCGTTGGAAACGGGAATATCCTCAT-TT-AAAATCTAGACGGAAGCATTCTCAGAACC-TGCTTTGTGATGTTTGCATTCAACTCACAGA
blockSeqs : GA G G T T A C A A AGA T T T C T C C G
blockSeqs : T C T G G C . T ATA T . C C T T T T
blockSeqs : T T C C . A AT . . G G G A
blockSeqs : G G A G . A TT . . T A
blockSeqs : C C T G . A AT . .
blockSeqs : G G C G . . TT . .
blockSeqs : T C A C . . . . .
blockSeqs : G C . .
blockSeqs : .
blockSeqCons :
originalCons : TCTCTTTCTGCAGAATCTGCAAGTGGATACTTGGAGCGCTTTGAGGCCGATGGTAGAAAAGGAAATATCTTCCTNTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTNTGCGTTCAACTCACAGAGTTNAACNTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAACGGGAATATCTTCAC-GT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCATTCAACTCACAGAGTTNAACCTTTCTTTTCACANAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATANTTGGANAGCTTTGAGG
finalCons : TCTCTTTCTGCAGAATCTGCAAGTGGATACTTGGAGCGCTTTGAGGCCGATGGTAGAAAAGGAAATATCTTCCTNTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTNTGCGTTCAACTCACAGAGTTNAACNTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAACGGGAATATCTTCAC-GT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCATTCAACTCACAGAGTTNAACCTTTCTTTTCACANAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATANTTGGANAGCTTTGAGG
Alignments
lowQualScore : 11 1 1111 1
lowQualScore : 88 3 1 1 1 1 0 3 0 0 4 0 2 0 5555 0 5 1 1 1 1 1 1
lowQualScore : .. . . . . . . . . . . . . . .... . . . . . . . .
lowQualScore : 00 7 0 0 0 0 9 9 5 4 0 7 6 5 8888 0 0 0 0 0 0 0 0
consensus : TCTCTTTCTGCAGAATCTGCAAGTGGATACTTGGAGCGCTTTGAGGCCGATGGTAGAAAAGGAAATATCTTCCTNTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTNTGCGTTCAACTCACAGAGTTNAACNTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAACGGGAATATCTTCAC-GT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCATTCAACTCACAGAGTTNAACCTTTCTTTTCACANAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATANTTGGANAGCTTTGAGG
Reference ( family-4391 ) : TCTCTTTCTGCAGAATCTGCAAGTGGATACTTGGAGCGCTTTGAGGCCGATGGTAGAAAAGGAAATATCTTCCTNTAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTNTGCGTTCAACTCACAGAGTTNAACNTTCCTTTTCATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCT-TCGTTGGAAACGGGAATATCTTCAC-GT-AAAA-CTAGACAGAAGCATTCTCAGAAAC-TTCTTTGTGATGTGTGCATTCAACTCACAGAGTTNAACCTTTCTTTTCACANAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATANTTGGANAGCTTTGAGG
gi|1 : TCTTTTTCTGCA--ATTTGCAAGTGGAGACTTCAAGCGCTTTGAGGCCAAAGGCAGAAAAGGAAATATCTTCGTATAAAAACCCGACAGAATCATTCTCAGAAACTGCTCTGTGATGTGTGCGTTCAACTCACAGAGTTTAACTTTTCTTTTCATTCAGCAGTTTGGAAACACTCTGTTTGTAAAGTCTGCAAGTGGATATCTTGGCCTCTTAGAGGCCT-TCGTTGGAAACGGG--TTTTTTCAT-GT-AAGG-TTAGACAGAGGAATTCCCAGTAAC-TTCCTTGTGTTGTGTGCATTCAACTCACAGAGTTGAATGATTCTTTACACAGAGCAGATTTGAGACACTCTTTTGGTGGAATTTGTAAGTGGAGAATTCAGCCGCTTTGAGG
gi|10 : GCATTCTCAGAAACTTCTCTGTGATGTTTGTGTTCAACTCCCAGAGTTTCACATTGCTTTTCATAGAGTAGTTCTGAAACATGCTTTTCGTAGTGTCTGCAAGTGGACATTTGGAGCGCTTT
gi|11 : TTTGCGTTTAAGTCACAGAGTTGAACGTTCCCTTTCATAGAGCAGGTTTCAAACCCTCTTTCTGCAGTATCTGGAAGTGGACATTTCGAGCGCTTTCAGGCCT-ATGGTGAAAAAGGc
gi|12 : GACAAACTCGTTCCCAGACAC-TGCGTAGTGATGTGTGTGTTTAACTCACAGAGTTTAACCTTTCTTTTCATACAGCATTCTGGAAACCCTCTGTTTGTAAAGTCTGCAAGTGGATAa
gi|13 : CAGTTTTTAAAGTGTCTTTCTGTAGAATCTGCAAGTGGTTACTTGGAGACCTTTGTGG
gi|13 : TCTTTCTGTAGAATCTGCAAGTGGTTACTTGGAGACCTTTGTGGAAGATGGTGGAAAAGGAAATGTCTTCCCGTAAAAACTACACAGATGCATTCTGAGaagatggtggaaaaggaaatgtcttcccgtaaaaactacacagatgcattctgag
gi|14 : cagtttttaaagtgACAGAGGCATTCTCAGAAAC-TTCTTTGTAATGTGTGTCCTCAACTAACAGTGTACAACCTATCTTTTGATACAGCACGTTGGAAACACTCTTTTTATAGAATCTGCA
gi|15 : GGATATTTGGAGCGCTTTGAGGCCTATGGTAGAAAAAGAAATATCTGCCTCTAAAAACCAGACAGAAGCATTCCGAGAAACTTCTTTGTGATGTTTGCATTCA
gi|16 : GTGTGTACTCAACTAACAGAGTTGAACCTTCCTTTTCACAGAGCAGTTTGGAAACACTCTTTTTGTGGCATTTGCAAGTGGATATTTGGATAGCTTTGAGG
gi|17 : GGATATTTGGAGACCTTTGAAAATT-TCGTTGGACACGGGAATATCTTCAT-AT-AAAATCTAGACAAAAGCATTCTCAGAATC-TTCTTTGTGATGTTTGCAT
gi|2 : TACACAGAAGCATTCTCAGAAACTGCTTTGTCATCTGTGCGTTCAGTTCACAGAGTTTCACCTTTCTCTTCATAGAGCAGTTTGGAAAGACTCTGTCTGTAAAGTCTGCAAGTGATTAGTTAGACCCCTTTGAGGCCT-TCGTTGGAAGCGGG-ATTTC-TCAT-TT-ACTG-CTAGACAGAAGAATTCTCAGTAAA-TCCTTTGTGTTGTGTGTATTCAAC
gi|3 : AACCTAGACAGAAGCATTCTCAGAATGTTTCCTGTGATGACTGCATTCAACTCACAGAGGTGAACAATCCTGCTGATGGAGCAGTTTTGAAACTCTCTTTCTTTGGATTCTGCAAGTGGATATGTGGACCTCTGTGAAGATT-TCGTTGGAAACGGGTTCATCTTCACAGA-AAAA-CTAAA
gi|4 : CTTTCCTTTTGATAGAGCTGTCTTGAAATCCTGCTTTTGCAGAATCTGCTTGAGGATATTTGGAGCTCTTTCAGGAAT-TCGTTGCCAACGGG-ATATCTGCAC----AAAA-TT-GACAGAAGCATTCTCAGAAACTTTTTTTGGGATGTGTG
gi|5 : TTGTGACGTGTGCATTCAACTCATGGAGTTCAACCTTTCTTTTGATTCAGCAGTTTGGAAACAGTCTTTTTACAGTATCTGCAAATGGCTATTTGGAGAGCTTTGAGGCCT-ATGGTGGAAAAGGAAATCTCTTCCC-AT-AAAA-
gi|6 : TTCTCAGAAACTTCTTTGGGATGTTTGCATTGACGTCACAGAGGAGAACATGCCCTTTCGTAGAGAAGGTTTGAAACACTCTCTTTGCAGTATCTGGAAGTGGACATTTGAAGCGGTTTCAGGCCT-ATGTTGAAAAAGGact
gi|7 : AAGTAGACAGAAGTGTTCTCAGAAACTTCATTTTGATGGGTGCATTCCACTAACAAAGTACAACCTTACTTTT-ATAGAGCAGTTTTGAAACAGTCTTTTTGTAGACTCTGCAAGTGGATATTTGGAGCGCTTTGAAGCa
gi|8 : AAACACCCTTTTTATAGAATCTGCAAGTGGATATTTGAAGCGCTTTGAGGCCTATTG-TGCAAAAGAAAATATATTCAC-ATAAAAA-CTACACAGAAACATTCTCAGAAAC-TTCTTTGTGATGTGTGC
gi|9 : gcAATCTGCAAGTGGATATTTGGATAGCTTCGAGGATT-TCGTTGGAAACGGGAATATCCTCAT-TT-AAAATCTAGACGGAAGCATTCTCAGAACC-TGCTTTGTGATGTTTGCATTCAACTCACAGA