lowQualScore : 11111111111111111111111111 22222222222222222222222222222222222222 111111111111111111111111111 11111111111111111111111111111111111111111111111 222222222222222222222222222222222222222222222222222222 1111111111111 11111111111111 1111111111111 111111111111111111111111 111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111 1111111111111111111111111
lowQualScore : 1 777 4 11111111111111111111111111 1 2 2 1 2 66666 22 4444444 1 444444 4 4 4 99999999999999999999999999999999999999 1 55 55 6666 2 1 555555 11 222 2 33 1 1 88888888888 5555555 4 88888888888888 1 1 111 2 2 22 000000000000000000000000000 333 22 2 22 1 2 11111111111111111111111111111111111111111111111 2 222 2 1 22 22 1 44444444 2 2 1 2 333333333333333333333333333333333333333333333333333333 33 22 3333 1111111111111 11 11111111111111 2 222 33333333333 2 3333333333333333 6666666666 666666666 2 2 3333333333333 222 222 11 2 1 222 22 22 555555 22 1 1 11 333333 1 11111 11111 1 1 888888888888888888888888 11 1 1 2 1 2 2222 1 2222 1 2 6666666 11 2 444444 22 11 1 1 1 22 111 333 3333 22 99999999999999 1 22222 1 2 666666 1 22222 1 22 333 1 44444444444444 1 222 22 1111 2 1 3333 2222 1 2 22 1 22 0000000000000 2 2 3333 777777777777777777777777 4444 44444444 33333 111 1 1 1 1 1 1 1 22222 333333333333 11 1 2222222 11 2222 1 222 000000000000000000 11 1 22222 222222 11 1 1 1111 1 1 555555555555 111 666666666666666666666666 1 2222 44444444444444444 11 666666 22222 1 33333333333333 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 222 11 1 1111 222 22222 555555555555555 2222 11 444444444444 1111 11 111 222 1 111 5555555 333 444444444 6666666666666666666666 1 4 44444 1 111 1 2 11 666666666666666 22222 11 555555555555555 1111 11 111 1111111111111111111111111 3 2222222 2222222 111 2 77777
lowQualScore : 5 000 0 6 55555555555555555555555555 0 0 0 5 0 55555 44 4 9999999 2 5 111111 0 0 0 99999999999999999999999999999999999999 7 55 55 6 1111 0 2 4 55 5 6 999999 4 77 2 999 0 00 5 4 5 55555555555 7777777 0 11111111111111 6 0 2 0 6 777 0 0 77 2 2 777777777777777777777777777 4 444 66 0 22 5 0 3 33333333333333333333333333333333333333333333333 3 0 111 77 2 0 2 5 6 3 55 2 33 6 2 3 66666666 2 2 0 0 5 0 666666666666666666666666666666666666666666666666666666 3 55 77 3333 2 66 0000000000000 99 77777777777777 4 444 0 2 555 22222222222 4 0 4444444444444444 4444444444 2 2 888888888 0 0 0000000000000 000 3 555 88 3 5 777 3 55 2 77 666666 77 4 6 0 5 33 888888 3 3 44444 88888 3 3 666666666666666666666666 4 88 6 5 7 3 8 6 5 0 3333 2 5 4444 4 5 2 0 55 5555555 99 77 0 111111 77 444 4 00 5 2 5 5 2 2 2 22 222 2 555 2 3333 33 66666666666666 5 66666 5 0 000000 2 5 2 33333 5 3 22 999 666 5 99999999999999 5 4 000 2 77 2222 7 5 6666 2 55 6 6666 4 5 0 33 2 5 2 77 8888888888888 0 0 3 5555 2 2 888888888888888888888888 0000 00000000 22222 4 3 555 1 7 5 3 3 3 3 6 2 3 2 0 0 2 3 66666 33 555555555555 8 8 11 6 77 0 3 4444444 0 11 0 4444 3 33 1 3 0 0 5 5 111 66 3 555555555555555555 22 44 0 2 0 44444 2 3 444444 22 0 0 4444 0 0 666666666666 222 333333333333333333333333 0 3 1111 1 11111111111111111 33 2 555555 2 8 22222 4 0 2 99999999999999 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 0 333 33 0 9999 222 7 3 33333 111111111111111 2222 11 444444444444 3333 5 22 444 555 5 8 0 444 6666666 666 4 444444444 3333333333333333333333 999 0 5 0 77777 0 2 777 0 7 11 8 888888888888888 8 0 8 22222 6 11 8 8 444444444444444 2 0 7777 11 8 444 3 7777777777777777777777777 3 3 6666666 3333333 444 0 4 0 5 1 55555 6
lowQualScore : . ... . . .......................... . . . . . ..... .. . ....... . . ...... . . . ...................................... . .. .. . .... . . . .. . . ...... . .. . ... . .. . . . ........... ....... . .............. . . . . . ... . . .. . . ........................... . ... .. . .. . . . ............................................... . . ... .. . . . . . . .. . .. . . . ........ . . . . . . ...................................................... . .. .. .... . .. ............. .. .............. . ... . . ... ........... . . ................ .......... . . ......... . . ............. ... . ... .. . . ... . .. . .. ...... .. . . . . .. ...... . . ..... ..... . . ........................ . .. . . . . . . . . .... . . .... . . . . .. ....... .. .. . ...... .. ... . .. . . . . . . . .. ... . ... . .... .. .............. . ..... . . ...... . . . ..... . . .. ... ... . .............. . . ... . .. .... . . .... . .. . .... . . . .. . . . .. ............. . . . .... . . ........................ .... ........ ..... . . ... . . . . . . . . . . . . . . . ..... .. ............ . . .. . .. . . ....... . .. . .... . .. . . . . . . ... .. . .................. .. .. . . . ..... . . ...... .. . . .... . . ............ ... ........................ . . .... . ................. .. . ...... . . ..... . . . .............. ................................................................................................................................................. . ... .. . .... ... . . ..... ............... .... .. ............ .... . .. ... ... . . . ... ....... ... . ......... ...................... ... . . . ..... . . ... . . .. . ............... . . . ..... . .. . . ............... . . .... .. . ... . ......................... . . ....... ....... ... . . . . . ..... .
lowQualScore : 0 000 0 0 00000000000000000000000000 5 0 0 5 0 55555 00 0 0000000 5 0 555555 0 0 0 00000000000000000000000000000000000000 0 00 00 0 0000 0 5 0 00 0 0 555555 0 55 5 000 0 55 0 0 0 00000000000 0000000 0 00000000000000 0 0 2 0 5 555 0 0 55 5 5 000000000000000000000000000 0 000 00 0 55 0 0 0 00000000000000000000000000000000000000000000000 0 0 000 00 5 0 5 5 0 0 55 5 00 0 5 0 55555555 5 5 0 0 0 0 000000000000000000000000000000000000000000000000000000 0 00 55 0000 5 55 0000000000000 00 55555555555555 0 555 0 5 000 00000000000 0 0 5555555555555555 5555555555 5 5 555555555 0 0 5555555555555 555 0 000 00 0 0 000 0 55 5 55 000000 55 0 0 5 0 33 000000 7 3 33333 77777 3 3 000000000000000000000000 7 33 7 0 7 3 3 7 0 0 5555 5 0 5555 0 0 5 0 55 0000000 00 00 0 555555 55 555 0 00 0 5 5 5 5 5 5 55 000 5 000 5 0000 00 00000000000000 0 55555 5 0 555555 5 5 5 55555 5 0 55 000 000 0 00000000000000 5 0 555 5 00 0000 5 0 5555 5 55 0 5555 0 0 0 00 5 0 5 55 5555555555555 0 0 0 5555 5 5 000000000000000000000000 5555 55555555 00000 0 7 777 0 3 0 3 3 3 3 7 5 5 5 0 0 5 2 55555 22 000000000000 8 0 00 0 44 8 2 4444444 8 00 8 7777 7 22 2 2 8 2 2 0 222 55 0 555555555555555555 55 22 2 0 0 22222 5 5 000000 22 0 0 8888 0 0 222222222222 555 555555555555555555555555 0 2 2222 2 22222222222222222 88 5 222222 5 8 00000 2 0 5 00000000000000 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 000 88 0 0000 000 0 2 88888 333333333333333 4444 00 666666666666 0000 4 88 222 888 1 0 0 000 2222222 222 0 222222222 8888888888888888888888 000 2 0 0 00000 0 0 222 0 8 00 0 444444444444444 0 8 0 00000 4 00 0 0 222222222222222 8 8 0000 00 0 000 0 4444444444444444444444444 0 2 0000000 8888888 000 8 8 8 0 2 77777 0
consensus : NCATTAAACGAGCATCA-GAGTGTTTTT---CGGTCTACAGATG---TGATTA-CACNGCGGTCCAAACGGGACATCCTGGGGTGTTAGTGGGTGCGAGATTCCGACCGGGGNTGTTGANTTNCCANCGGNTTCGGCAGCCGGGNCAAGATGAAGTTCATTTC-AATTT-CACAATAGAGGGAATAACGATGTTAAATGTAGTAGTTGTAATGATATAAATTACTGCAGTCGGAAGGA--GGTCTGTACGAGGGTTATNCTNAANNAGCGGCAAAAGAGGAATGNATGNCTTGNAGTTNCGTGCAGAACACCTCCGCCGAGNTTGAGAAGTAGAGGCT-GAAAAACAAA-CATC--CCGATTTACGTCGAGAT-TTACGATTTAAAGAGCTTGAGATTTTATG-TAGCTATTGAC-TTGATTCTGGT---GGTGAGTGGTGGGTGAAGNGNTAGTGATAGTTTTAATGGTGTAGTGCAGACNGAGATTTTAACATTGTATCAATGANGATGGTGGCACGTGNGGGNNAGGGNTGTCAAGANGGTGTGCTTTGGGTGAAAGCAC--GTGTGAGCCGANAATTGCGCANNGCANGGGCAAGCAGACTCNTTCTTGNGAGCATCCCNTGNACTTGCGCACGCGGAGAGNANAATTCGGANAGTGACTGCAGCGGCGCTNTANATGCCTGCAAGCACCGTGACCTACAGNCAATACTGTCTGGGAGAAACGAGGAATGTCTGAATTTTGAAGANTGGTGTTNNCAGGAANGACAGGGGAATCATCCTGCCAGTTTNANNACTAGGCAACCGTGCGGGAACNAGAACTGTTGGCTCAAATGTATGTGTGTNCNCGCTAGNCAGGGGTAGGTTAATGGTGCNCNTCAGNTGCTCGTGGAGGGTTGGCCGGGGTTCCAC-TGGTTCCAACGNACTGGATCACATNCAGATTGTGCTAGGTTGGAGTACCAGATGNAAACCNGACGGACATGGCCGTANCTNANCCACCAAACACCTAGATGTATCCAGGAAANANAAGGNAAGGCCGCTTNATCCCGTCAGAAAACCCCACAGAGATGGTGNTTTCTTNAATCCCGATTGANNAGGCA-A--ANC-GG-AAT-AATGGC-GCATCAAA-GGAGA-CGG-TGGAGCGGTCG---T-GCT--GACAANCCTA--GTGCCTTACGT-GCCGG-ATGGTT-CCGGGACCAGAAGTGTGCCATGCAGGGTANTCGAAGAATCTCTCAGGNTGGGAACCAACANTGGGAGANNGCAAACAGCAGACATNGGTCNNTACTGATCAGTACGNCAAGTGTGATCAGGNCNCATTTGCGAAAGANGTNTGCTCTNTCGTCGGTGTCGTANAGGGNATNGGNCAACCCGNTCGAGGGGGNGAGTCAGGATTGAGTAGCNAAGNCGTGGAGNACAAGGGAGATCGAGTGATTCTGCTGACGTTATGAATGCCGAAGAGGTAT-ATGGNCAAGAGCAGTTCGAGGNTCTCCANCCAGAGAGTGTCTGTTGGNCAGAANGAAGGGNNNTGGCTGACCCCATTNGNCCAGNNANAGCGCTGANGGCGTTCAGNNCTTNCACTCCNGGGNNNNAGAGAAAAGGTCAGCGACNGGTCGCNNCCGTCAGAGACGATACGTGANCTCTTCGCACGCATAGTACACTGGNCTGCNAGACGAGANAGGTGGAATTCTTGACGAGTTCTTCCGTCAACGAGAATCAGGCGTGTTCTNTCTGCATTGTNTNATGGTGGAAGCCTCTGCACTGATACCAGAGTGATCTCGCTCACATACTTAGCCTGGAA-G---TNTNCGACGCAAANACAGAGACTCCTGTCACGA-CTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGNTGCTGAAGCCGGCTGC-AT-TAAAGACCGTTGAAGAGTATG-ACA-AACAGATCGTCACC-------CC--ATATATGT-CCACGAAGCTGC--AAA-AGTGACACACCTGAATCGGGTCTGGG------ATAGTTACT--TTGCTGATTCACTGAAATGCAGTG-ACANTCGCAAAGCGGAGACGAGGC-TGCGGAGATGTGTGGTGGCTGCCGCNGCCAAACCAAG--AAACC--T-GCAGGAAACTGGCAGA-ACTTCCTACGAATG-GA----NAGCTACAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGGAATGG-TTT--------GACC-AGGAGG-----GAC-AAACAACT----CGCCATTACTGATGAA-GA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CATTCG-CCCCA--TGTAA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--AATGC--TCC-TCACGCAG---CCCAGAACG--NACACCGTGC-AA-ATACTCATCTA-GGG--CTNTAGACA--C------CCGATGTT-AGC-G---CTGG--C----AGT--GT-----CCCTG--TCA--CA-GGA--ANTGCAAACCAGAAAAGAC----AAACTG---GCGTGG--N--ATTCG--GAA--CAG---N-C-CGAGATTTCC-GATACCTAGCAGCAN--ATG-AAATAGCAGCTGGA-TTGGG--ACGAGAGAAGGCTCATG-CACTACCAATGTT-C-CACGCTCTCNC-TGGATGT-GACACTGTGTCTAGTTTT---AC--T-TC----TTTTGCTAGACGTGGCAAGAAG-ACTGCGCGG-GG-CAATCTGG-AC-GGTACTG-CCAG--AA-CTCGC--NG---AGGC----GCT-GCTGCTGC-TGTC----ATCTGC--ACC-GCG-TG--A--CATACCAG--ACGATGCAATG----CGCA--TCA-T---CGAGAGGT-C--GTGATCCTTT----TGTAT-ATCGAACCA-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
Reference ( gi|1 ) : ACATTACACC--CATCAAGGGTGTTTTTTTTCGTCCTA-AGATGGCCTGATTAACACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTTCAATCGCTTCGGCAGC--GACTAAGATGA-GTTCATTTCCAATTTTCACAATA-AGG--AT--CGAT------TGT-----CTG--ATTAAATATATTACTGCA--CGGAAGGAAGGGTTTGTA--ACGGTT-TCTTAAACCAGCGACAAAATAG--ATGAATGCCTTGCAGTTCT-TGC-GAACACCTCTGTCGAATTTGAGAA-TAGA--CTCAAAAAACAAAACATCACCCGATTTACGTCGAGATCTTACGATC-AAAG-GCTT---ATCTTATG-TAGCTATTAAC-TTGATTCTGGT---GGTG-GTGGT-AGT--AGGGGT--TG----------TGGTA----ATA-ACTGAGATGTTAACATTGCATCA-TGAG-ATGGTGGCAC-TGTGGA-----GCTG-CAAGAGGGTG-G--TTGAGTGAAAGCACTTGTGAAAGCCGATA-TTGCA-AAAGCAGGGGCA-GCAGACTCCTTCCTGAGGGCATCTCGTGT-CTTGCGCACAAGAAGAGCAAA--TC---AAGTGACTGTAGCAGCATTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCA-------CT-------------AATGTCTGAA------AGAA-------ACCAGGAATG-CAGAGGA--CATCCTG--AGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATCG-TTAATTATGTACCTC-GATGCTC-TGACGA--TG-CTGG--TTCCACGTG----CA-CGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTGAAGGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAAT-TAAGATAAGGCTACTTCA--CCATCAGAAAA---CACAGAG--GGTGTTCTCTTCAATCCCAATTGACCAGGCACA--AGC-AG-AAC-AATAGCTGCATCAAA-GGAGA-CGG-TGGAGCAGTTGGGCTCACT--GACAATCCTA--GTGCCTTACGTCGCAGG-AAGGTT-CTGGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTT-CAGGTTGGGAACCAACACTGG-AGACTGCAA-------ACATACGTCATTA-TGATCAG-ACGCCAAGTGTA--TAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCATAGAGGAGATGGGC-AACCCGTTCGAGGAGGGGAATCAGGAT---GTAGCCAA-AC-TGGA-AACAAGGGAGATCGCA-GATCCTGCTGACGTTATGAATGTC-AAGAGG-ATCATGGCCAAGAGCAGTTCAAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC-AAAGGCTGTGGTCGACCCCATTC-CTC-GTAACAA-GCTGAAGGTGTTCAGCACTTCCACTCCAAGGTTCCAGAACAAAGGTCAGCAAATGCTCGTCTCCGTCAAGAACGAC-CGTGAACTCTTCGCACGCAT-GTACACTG-TCTGCCAGACGAGAGA--TGGAA------AC-----CTTTCGTCA-TGAAAATCAGGCATG-TCTATCTGCATTGTCTGATGGTA------TC-------------GAGTGATCTC-CTCACATGCTTAGCTTGGAA-G---TTTCCGACGCAAGTACAGAAACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACA-AACAGATCGTCACC-------CT--AGATATGT-CCACGAAGCTGC--AAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACT--TTGCTGATTCACTGAAATGCAGTGTACACTTGCAAAGCAGAGACAAGGCTTGCGAAGATTTTTGGTGGCTGCCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGA-GCTTCCTACGAGTG-GA----AAGCTACAAGACCGAG--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGGAATAG-TTT--------CACC-AGGAG------GAC-AAACAACT----TGTCATTACTGACGAC-GA-----AGG--AGTGCTC--AGCAAGCCACTACTGCCAGGCCAGATCTGACT--C-CACTCG-TCCCA--TTTAA-CCGACTAAAGAAGCTGAAGCATTCAGATA----TGCTGTCAATGCAATCT-TCAAACAG---CCCAGAACA--GACACCATGC-AA-ATA-TCA-CTACGGG--CTATAGACA--CATCGATCCGATGTTAAG--G---CTGG--C----AGT-CGTG----CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTC---GCATGG--G--ATTCC--GAA--CAG---T-C-CGAGTTTTTC-GATAACTAGGGGCAG--ATT-GAATAGCAACTGGA-TGGGA--ACAAGAGAAGGCTCATGCCATTG-CAATGTT-TACACACTCTCACGTGAATATCGACACTGTGTCTAGTTTTTCCAC--TGTCGTAGTTTTGCTAGACGTGGCCAGAAGAACTGCGCAGTGG-CAGTCT-G-AC-GGTACTGTCCAG--AA-TTCAC--AGTCTAAGC----GCT-GCTGCTGC-TGTC----CTCTGC--ACC-GCA-TG--A--TA-ATCAGA-ACGACGCAATG----CGCA--TCA-T---CGAAAGG-----GTG--CCGTT----TG----ATCGAACTAGGCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAAATCTTCCGCAATTAAAGAAAGAACAATA
gi|2 : CATTAAACGAGCATCA-GAGTGTTTTT---CGGTCTACAGATG---TGATTA-CACAGCGGTCCAAACGGGACATTCTGGGGTGTTAGTGGGTGCGAGATTCCGACCGGGGTTGTTGATTTT-CATTGGATT-GGCAGTCGGAC-AAGATGAAGTTCATTTC-AATTT-CACAATAGAGGGAATAACGATGTTAAATGTAGTAGTTGTAATGATATAAATTACTGCAGTCGGAAGGA--GGTCTGTACGAGGGTTATATTTAAACAG-GGCAAAA-AG---TGAATGG-TTGAAGTTATGTGCAGAACAC-TCTGTCGAAATT-AGAAGTAGAGGCT-GAAAAACAAA-CATC--CCGATTTACGTCGAGAT-TTACGATTTAAAGAGCTTGAGATTTTATGGTAGGTGTGAATGTTGAAT-TGATATGGGTGAGTGGTGAGTGAAGGGTT--TG----------TGGTATAGTGTAGACTGAG-T-TTAACATTG--TCAATGAGGATGGTGG-ACGTGTGGGAT---GCTGTCAAGAGGGTGTGCTTTGAGTGAAAGCA---GTGTGAGCCGATAATTGGACAAAGCAGGGGCAAGCAGACTCCT-CTTGAG--CATCTCGTGGATTTGCGCACATAGAGAGAAAAATTCGGAAAGTGACTGTAATGGCATTGTACATGCTTGCAAGCAC-GTGACCTACAGT-A-------T---------------ATGTCTGAA------AGAA-------CACAGGAATGACAGGAGAATCATCCTG--AGTTTGAAGACT-------------GGAA-TAGAACTGTTGG--------------TGTACTTGCTAGGCAAGGATAGGTTAATAGT-CACGTCAGATGCTTGTGAAGAGTTGGCTGGGGTTCCAC-TG----CAACGGACTGGATCACATGTAGA--GT---AGATTAGAGTATCAGATAGAAACCTGA-GGACATGGTGGTAACTGAGCC--CAAACACC-AGATGTATC-AGGAAATATAAGATAAAG--GCTTAATCCCATCAGAAA----C-CAGAG--GGTGATTTCTTAAATCC-AATTGAGGAGGCA----AGCTAG-AACTAATGG----ATCAAAAGGAGAGCGGGTGGAGCGGTTG---TAACTTGAACAATCCTAAGGTGC-TTACGT-GCAGGGAAGGTTTCTGGGAC-AGAAGTGTGTCATGCAGGGTACTCGAA-AATCTTTCAGGTTGGAAAC-AACAATGGGAGAATGCAA-------ACATTAGTCCATACTGATCAGTACGC-AAGTGTGATTAGGATACATTTACGAAAGAAGTTTGCT-TGTCG-CGA-GTTGTATAGGGGATGGGCCAACCGGATCGAGAGAAGGAATCAGGATTGAATAGCCAAGACGTGGAGAACAAGGGAGATCGAGTGATTCTGCTGACGTTATGA-TGTCGAAGAGGTAT--TGGCCAAGAGCAGTTCA-GGCTTTCCACCCAGAGAATGTCTGT-GGCCAGAAAGAAAGGCTGTGG---ACCC-ATTAGCTCAGTCAAAACGC-GAAGGTGTTCAAAA-TTACACTCCT-GGTTACAGAA-AAAGGT-AGCAA-TGATAGTATCCGTCAGAGACGATACGTGAACTCTTCGCACG-ATAGTACACTGGTCTGCCA-ACGAGAGAGGTGGAA------ACG----CTTTCGTCAATGAAAATCAGGCATG-TCTATC-G-ATTGTCTGATG-TA------T--------------GAGTGATCTCGCTCACATACTTAG--TGGAA-G---TTCTCGACGAACGT-TAGAAACTCATGTC--GA--TGTA-TT-TGCTATGGATGGAG-AGC-ATCGTCCAGTTGCTGAAGCCGG-TGTGATGTAAAAACTGT-GAAGAGTAAG-GAA-AACA--TGGTCATA-------CTGAATATATGTGCCACGAAGCTGC--AAA-AGTGAC-TACATGA-TCGGGTCTGGATAGTTAGTAGTTACT--TTGCTGATTCACTGAAATGCAGT--ACACTTGCAAAGCAGAGACAAGGCTTGCGGAGATTTTTGGTGGCTACCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGA-ACTTCCTACGAGTG-GA----AAGCTACAAGACCGAA--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGAAATAT-TTT--------GACC-AGGAG------GAC-AAACAACT----TGTCATTACGGATGAA-GA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCCA--TATTA-CCA--TAAAGAAGCTGA--CATTCAGATAT---TGCTGC--ATGC-ATC--TCAAACAG---CCCAGAACA--GACACCATGC-AATAT--TCATCT--GGG--CTATAGACATGCA-----CCGATGTTAA---G---CTGG--C----AGT--GT-----CCCTG--TCA--CA-GGA--AATGC-AACCAG-AAAGAC----AAACTG---GC-TGG--G--ATTCG--GAA--CAG---TCC-CGAG-TTTTC-GATAACTAGGGGCAG--ATG-AAATAGCAACTGGA-TTGGG--ACAAGAGAAGGATCATG-CATTGCCAATGTTATACACACTCTCAC-TGAATA-CGACACTGTGTCTAG-TTTTCCACTGTGTC-TAGTTTTGCTAGACGTGGCAAGAAG-ACTGCGCAG-GG-CAGTCTGG-AC-GGTACTG-CCAG--AA-TTCAC--AG---AAGC----GTT-GCTGCTGC-AGTC----CTCTGC--ACC-GCA-TGACA--TA-A-CAG--ACGACGCAATG----CGCA--TCA-T---CGAAAGG-----TT----CGAT----TG----ATCGAACTA-GCAA-------ATGCAC--------A---C----ACAAGGCCAGGAGGAAAATCTTC
gi|20 : TGAT---CACTGCG-TCCAA-CGGAACA-CTTGGGGTATTAGTGA-TGCA-----CCGACCGGG-ATGTTGAATTGC--ACCGCTTCAGCAGC--GGACAAGATg
gi|21 : tggTT-TCCTAAACGAACGGCAAAAGAAGAATGTATGCCTTACAGTTTC-TGC-AAACACC-CCGCC-AGTTTGA
gi|5 : TATG-TAGCTATTGAC-TTGATTCTGGT---
gi|3 : agaactcaccgaggcgctgctgctgctgtcatttgcaccctgcgacataccagacaatgcaatgcgcatcattcagagatcgaaacagcaaatgcacagacattaacaaggccaggaggaagaacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacatATG-TAGCTATTGGC-TTGATTTTGGT---GGTG-ATGGT-GGT--AGCGGTAGTGATAGTTTTAATGGTG----ACA-ACAGAAATTTTAACATTGTATTA-TGAT-ATAGTGGCAC-TGGGGGTAAGGGATG-CAAG-TAGTG-G--TTGGATG----CAC--------GCTGAGA-TTACG-ACTGCATGGACA-GCAGACTCGTTCTTGCGAGCATCCCTTGT-CTTGCACACGCGAAGAACACA--TC---CAGTGACTGCAGCAGCGCTCTAAAT-CCTGCAA-CACCGTG-CCTACAAACAATACTGTCTGGGAGAAACGAGGAATGTTTGAATTTTGAAGACTGGTGTTGCCAGAAAGG--AGAGGA--TATCC-GCCAGTTTCATTACTAGGCAACCGTGCGGGAACAAAAACTGTTGGCTCAAATGTATGTGTGTTCGCTC-AATTAGGAGTAG-TTAATGGTGTTCCTT-GTTGCTC-TGGAGG--TG-CCGG--T-CCAC-TGGTTCCA-CGCACTGGATCACATCCA--TTATGCTAGGT-GGA-TACTAG-TGCA--TCAGACGGACATGGCCA-ACCTC-TCCACCAAACACCTAGATATATCCAGGAAAA-GAAAGGAAGGCCACTTCA--CCGTTAAAAAACCCCACAGAGATGGTGTTTTCTTTAATCCCGATTGACAAGACACATGAAC-AG-AAT-AATGACGACATCAAG-GGAGA-CG---------------------------ACCCTA--GTGCCCTACGTGGTCGG-ATAATT-GCGGGACCAGAAAT-TGC----TAGAGTAATCGAAGAAT-TC-CAAGATGAGAACCAACACTAG-AGACGGCAAACAGCAGACATAGGTCATTA-TGATCAG-A-AACAAGTGTA--CAGGCCTCATTTGTGAAAGATGTATGCTCTCTCGTCGGTATCATAGAGAATATTGGA-AACTCACTCAAGGAGGTGAGTCAAGAT---GTAGTAAA-CC-TGGA-CACAAAG--------------CTG-TG-----ATGAATGCC-AAGAGA-AT-A-GGATAAGAGCAGTTCGAGGATCTC-AAC-AGAGAGTGTCTGTTGGACAGAAC-AAGGAAATTGGCTGACCCCATTC-ACC-AAGACAG-GCTGATGGCATTCAGCCCTTCCACTCCAGGGAGCAAGAGAAAAGGTCAGTGACAGGTCACCGCCGTCAAAAATAAT-TTTGATCTCTTTGTACGCAT-GTACATTG-GCTGCAAGATGAGATA--TGAAATTCTTGACGAGTTCTTCCGTCA-CGAGAATCAGGCGTGTTCTCT-TGCATTGTGTTATGGTGGAAGCCTCTGCACTGATACCAAAGTGAT----CTCACAT-----ACCTGGAATA---TGTATAACGCAAAAACAGAGACTTCTGTCACAACCTGTA-TTGTGCT-TG-ATGGATCAGCCATTGTCCAGATGCTAAAGATAACTGC-AT-TAAAGGCCTTTGAAGAGTATGCAC--AACAGATCGTCACCCCGTATACC--AGGTATAT-GCGCGAAGCTGT--AAACAGTATCACTCCTGAATCTGGTCTGGA------ATACTTACC--TCGCTGATTTACTGAAATGCA--GTACATATGCAAAGCGGAG--------TGCGAAGATGTGTGATGGCTGCTGCA-------------------------GGAAACTGACATA-ACTTCCTAAGAATG-GA----CGGCTTAAAAAC--AG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CTAATTGCCAGTTATCAGGGAATGA-TTT--------GACT----AG------GAC-AAGCAACT----CGCGATTGCTGATGGA-GA-----GGC--AGTTCTC--AGCAAACAACTACT-----GCCAGATCTTACC--T-TATTCGCCCCCA--TGTAA-TCA--TAAAAAAGCTGA--CAGTCAAATGC---TGCTG--AATGT--TTC-TCACGCAG---CCC--AACATTCACACCGTTC--A-ATACTCATCTA--GA--CTCTAGACA---------CTAATGTT--GT-G---CTGG--A----AGT--AT-----CCCTA--GCA--CA-GGA--TATGC-AACCAGAAGAAA-----AAATAT---GACTGG--C--ATTCG--GAA--CAG---T-TAAGAG-TTTCC-AATACCTAATAGCAC--ATG-AAATAGCACCTtcagcaaatgtagatttcaagt
gi|4 : aATG-TAGCTATTGAC-TTGATTCTGGT---t
gi|18 : tgcttggaagaagtctccgacgcaaagacagagaatcctttcacgaactgtaatttgcttgatggagcagccattgtccaggtgctgaagccagcttcatcaaagacctttgaagagtattcacaacaggtcgtcattccatatatgtccacgaaactgcgaatagtgacacacctagatctgatctgggatacttaccttcctgattcactgaaaggtagtagacagtcacagaggggacaaggcgtgctgagacgtgtggtggctgccgctgccaaaccaggaaactggcagaccttgctaccgatgtgacagcaacaagactgaaacctggttcaggttcccttctcagcagcttcatggaatggctttgacccaggggagacaaacactcgtcatttcttatggaatgccagtgctcccagcaagccacaactgccagattgacttacaattgtccatgtaaacccaccgaaaaagctgacaattggatggggttgctgcattgcctattacacaagttcccagtgtacaccatgccaaatacttatccgggaccttggacaccgatgtctggctgctggcccccagtgtcccttgcatccaggagttgcaatcatgtaagacaacctgtgttactaatttggaacaggctagaatttcagatacctagcagcaaatgaaatagcagctggatttggacgatagaaggctcatgcactaccaatgtttcacgctctcactggatgtgacactgcgtctaattatgcgagaagtggcaagaagactacatggacaaactggacggtactgcaataactcactgaggcgctgctgctgctgctgctgctgtcatttgcaccgcgtgacataccagacgatgcaatgtgcatcatcgagaggtccgtgatccttttatatgatcgaaccagcaaatgcacagacattgacaaggccaggaggaaaatattcgcaaggaagaacaatgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagatATTGAACAGG---A--ATC-GGTGAT-AATGGCTGCATCAAA-GGAAA-CGA-TGGAGCAGTCGGTCTCGCT--GACAAACCTA--GTGCCTGACGTCGCTGG-ATGGTTGCTGGtatatccagagatatcagcaaatgtagatttcaagtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|4 : GCTTGGAA-GAAGTCTCCGACGCAAAGACAGAGAATCCTTTCACGAACTGTAATT-TGCT-TG-ATGGAGCAGCCATTGTCCAGGTGCTGAAGCCAGCTTC-AT-CAAAGACCTTTGAAGAGTATT--CACAACAGGTCGTCATT-------CC--ATATATGT-CCACGAAACTGC--GAATAGTGACACACCTAGATCTGATCTGGG------ATACTTACC--TTCCTGATTCACTGAAAGGTAGTAGACAGTCACAGAG--GGGACAAGGCGTGCTGAGACGTGTGGTGGCTGCCGCTGCCAAACCA----------------GGAAACTGGCAGA-CCTTGCTACCGATGTGA----CAGCAACAAGACTGAAACCTGGTTCAGG-TT-CCCTT-CT-CAGCAG-CT------------TCATGGAATGGCTTT--------GACCCAGGGGA-----GAC-AAACA-CT----CGTCATTTCTTATG---GA-----ATGCCAGTGCTCCCAGCAAGCCACAACTGCCAG-----AT-TGACT--TACAATTG-TCC-A--TGTAAACCCACCGAAAAAGCTGA--CAATTGGATGGGGTTGCTG-CATTGC---CTATTACACAAGTTCCCAG--TG--TACACCATGCCAA-ATACTTA--TCCGGGACCT-TGGACA--C-------CGATGTCTGGCTG---CTGG--CCCCCAGT--GTC----CCTTG---CATCCA-GGA--GTTGCAA-TCATGTAAGAC----AACCT----GTGTTACTA--ATTTG--GAA--CAG---G-C-T-AGAATTTCAGATACCTAGCAGCAA--ATG-AAATAGCAGCTGGA-TTTGG--ACGATAGAAGGCTCATG-CACTACCAATGTT-T-CACGCTCTCAC-TGGATGT-GACACTGCGTCTAATT-----A--------------TGCGAGAAGTGGCAAGAAG-ACTAC---ATGGACAAACTGG-AC-GGTACTG-CAAT--AA-CTCACTGAGGCGCTGCTGCTGCT-GCTGCTGC-TGTC----ATTTGC--ACC-GCG-TG--A--CATACCAG--ACGATGCAATG----TGCA--TCA-T---CGAGAGGTCC--GTGATCCTTTTATATG----ATCGAACCA-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATATT-CGC-----AAGGAAGAACAATac
gi|12 : tGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACA-AACAGATCGTCACC-------CT--ATATATGT-CCACGAAGCTGC--AAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACT--TTGCTGATTCACTGAAATGCAgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagataccagaatcaagtcaatagctacattatatccagagatatcagcaaatgtagatttcaagtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|4 : T-CCATGAAGCTGCTGAGA-AGGGA---ACCTGAACCAGGTTT----------CAGT--CTTGTTGCTG--TCAC
gi|9 : tgcttggaagaagtctccgacgcaaagacagagaatcctttcacgaactgtaatttgcttgatggagcagccattgtccaggtgctgaagccagcttcatcaaagacctttgaagagtattcacaacaggtcgtcattccatatatgtccacgaaactgcgaatagtgacacacctagatctgatctgggatacttaccttcctgattcactgaaaggtagtagacagtcacagaggggacaaggcgtgctgagacgtgtggtggctgccgctgccaaaccaggaaactggcagaccttgctaccgatCAAGGCAGTGACGAGAC--ACGTCGAT-----GTATCTGCCGATGCCACAC--AGTAAAACC--T-GCAGAGAGCTCTCCGACGTATTCGACGAACG-GATGCCAA---ACAAGATAG-G--CTG-TTCAGGATTGCC--TGCTGCAGCAGGCT-----C------TCATGGAATGG-TTTTGTTTGAACACT-ATAAGGCGATAGACGAGACAACTTCGATACCAATACTGA-GATAGATAATGAGG--AATGCTC--AGCAAGACA-TCCT-----GCCAGATCT-ACTTAC-AATTCG-CCCCAACGTGAG-AGGACGACAGAAGCTGatggctttgacccaggggagacaaacactcgtcatttcttatggaatgccagtgctcccagcaagccacaactgccagattgacttacaattgtccatgtaaacccaccgaaaaagctgacaattggatggggttgctgcattgcctattacacaagttcccagtgtacaccatgccaaatacttatccgggaccttggacaccgatgtctggctgctggcccccagtgtcccttgcatccaggagttgcaatcatgtaagacaacctgtgttactaatttggaacaggctagaatttcagatacctagcagcaaatgaaatagcagctggatttggacgatagaaggctcatgcactaccaatgtttcacgctctcactggatgtgacactgcgtctaattatgcgagaagtggcaagaagactacatggacaaactggacggtactgcaataactcactgaggcgctgctgctgctgctgctgctgtcatttgcaccgcgtgacataccagacgatgcaatgtgcatcatcgagaggtccgtgatccttttatatgatcgaaccagcaaatgcacagacattgacaaggccaggaggaaaatattcgcaaggaagaacaatgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagataccagaatcaagtcaatagctacattatatccagagatatcagcaaatgtagatttcaagtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|6 : cattgacagtatagaagccttctgcaCA-CCA-GGA--CTGTAGACA--C--CAATGC--TGT--AG--GTGACTGGTGC----AGTTCGTGTTCGCCATGCATCA--TATGGAGTATTGCAA-CGAGAAA-GACTAGAGAACTGTGAGTATGG--ACTATTGCATGAAGACAGACGC-C-AGAATTCT----ATAACTGGTAGCAGCCATGAGAATAGCAGCTGGATTGGGACGACAAGA-AGGGC
gi|7 : cagcattaggTGG--C--ATTTG--GAG--CAG---G-C-CAGAATTTCC-TATACCTAGCAGCAC--ATG-AAATAGCAGCTGGatggtacagcggatagactcaaagtcaatgtcttcaacgtggaatgtccaccactcgttagtcaacatgtatattgctaggagagtggcagacattatctcattacgacaatgctagaagacaggtactgtacaattaacttcgcgtgaaggcagctagctgcgcatgtcatgacttgccagccagcagtggactagacacagacgatgcatgagcacgcaattcagtgggcgagaggtggtcgtgatccttttgtatatcgaaccgagcaagaataagatgtacagagatcattgacgcagggagaaaatcttgggcaaggaagacgaatgagtgcatcgctcatccctccaaacgaaggcagcgtcgttggcggaacatgtaaagagcggcaggtgtatcaagaaatggtgtgtgagcagatactgggatcccaacacacaaatcgtccgccaacaaccaactggggttggtcaaggacgtgaaggacagtacacaccttactggaccgctaccctgattgcagctcacagcgatatgagcatggttttcatgtgcaaaagcagaacagggtagtgggacg
gi|14 : tggtAATAGCAGCTGGA-TTGGG--ATGAGAGATGACTCATG-CACTACCAATGTT-C-CACGCTCTCTC-TGGAGGT-GACACTGTGTCTAG-------------------TTTTGCTTCACGTGGCAAGAAG-ACTGCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggacaatctggacggtactgccagaactcgctgaggcactgctgctgctgtcatctgcaccacgtgacataccagacgatgcaatgcgcatcatcgagaggttcgtgatccttttgtataatcgaaccagcaaatacatgtacagagacattgacaagggaagaaaatcttcgcaaggaagaacaatgagcagctcatccctccaacgaaggcagctctggaggaacatgtaaagagggcagtgtatcaaggaaatgtgtgtagtcagatactgctaccaacaccaaatcgtcctccaccaaccaactggggttggtcaag
gi|16 : aGCAGCTGGA-TTGGG--ATGAGAGAAGGCTCATA-CACTACCAATGCG-C-CACACTCTCTC-TGGATGT-GACACTGTGCCTAGTTTT---AC--T-TC-------------ATGTGGCAAGAAG-ACTGCATG--GG-CAATCT-A-Aatgggtaatctaaac
gi|7 : GA-CAATCT-GGAC-GGTACTG-CCAG--AA-CTCGC--TG---AGGC----ACT-GCTGCTGC-TGTC----ATCTGC--ACC-ACG-TG--A--CATACCAG--ACGATGCAATG----CGCA--TCA-T---CGAGAGGTTC--GTGATCCTTT----TGTATAATCGAACCA-GCAA-------ATACATGTACAGAGA---CATTGACAAG----GGAAGAAAATCTT-CGC-----AAGGAAGAACAATa
gi|6 : tggttggcatttggagcaggccagaatttcctatacctagcagcacatgaaatagcagctggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngg-G-ACAGGTACTGTACAATTAACTTCGC---GTGAAGGCA---GCTAGCTGC-GCATGTCATGACT-TGCCAGCCAGCAGTG--GACTA-GACACAGACGATGCA-TGAGCACGCAATTCAGTGGGCGAGAGGTGGTCGTGATCCTTT----TGTAT-ATCGAACCGAGCAAGAATAAGATGTAC------AGAGATCATTGACG----CAGGGAGAAAATCTTGGGCAAgagcagctcatccctccaacgaaggcagctctggaggaacatgtaaagagggcagtgtatcaaggaaatgtgtgtagtcagatactgctaccaacaccaaatcgtcctccaccaaccaactggggttggtcaag
gi|5 : cagcattaggcaccaggactgtagacaccaatgctgtaggtgactggtgcagttcgtgttcgccatgcatcatatggagtattgcaacgagaaagactagagaactgtgagtatggactattgcatgaagacagacgccagaattctataactggtagcagccatgagaatagcagctggattgggacgacaagaagggcatggtacagcggatagactcaaagtcaatgtcttcaacgtggaatgtccaccactcgttagtcaacatgtatattgctaggagagtggcagacattatctcattacgacaatgctagaaAG--AA-CTCAC--CG---AGGC----GCT-GCTGCTGC-TGTC----ATTTGC--ACC-CTG-CG--A--CATACCAG--ACAATGCAATG----CGCA--TCA-T---TCAGA----------------------G----ATCGAAACA-GCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAGAggaagacgaatgagtgcatcgctcatccctccaaacgaaggcagcgtcgttggcggaacatgtaaagagcggcaggtgtatcaagaaatggtgtgtgagcagatactgggatcccaacacacaaatcgtccgccaacaaccaactggggttggtcaaggacgtgaaggacagtacacaccttactggaccgctaccctgattgcagctcacagcgatatgagcatggttttcatgtgcaaaagcagaacagggtagtgggacg
8 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|8 ): CCATTTTAGAAGAATGTCAGTGTAATCTAGCTTCAGATGCTAGACCATATAGCATGTCAGTATTATACCTAAGACATTTACAGGACTAATTAAGCCATTCATTTTAAAGTATTGTGTTGAATCCAATTTTTGCCTAGATAATTTCCAAATACAATCACGTGACATACTGTGGTAGATAATATCAAGTTGAAATTGGTACCATTGGATTTCTTGCGCCCACCCCAACATATACATATTTAGATATTAAAATCAAGTCAATAGCAGCATTGTGTCAAGAGATAATAGCATTTGGATTTCAAGTTGCGGCCATTTTGAAATCCAATATGGCGGACTTACAGAGAGAATTTCAAGTGGCCCAATAACTGAAAATGTTCGTAACATATTAATGAATATTTGTGCCAAATTTGGTGCTTGCATACCGAATTGTACACTTCTTACAAATACCGGTATTTGGGCTAAGCCGCCCGACTAAAA
Unaligned ( gi|10 ): TGCGCTACAATGCCCCAATAAAGATACATTTAGATTCCGGAATAACTGCAATATATCCACAGATAATAGCAAATGTATATTTCAAGTAGCGGCCATTTTGAAATCCAATATGGTGGGCACTTAAAAAGAATTTCAAGAGGCGCAATATCTGAAAATGTTTGCAACATGTTAGTGTACATTTGTGCAAAATGTGGTGCTTGTATCACAAAATGCACAACAGGTTTGCTATGCTGCTCCGCTATTATAAC
Unaligned ( gi|11 ): TTGACAATACCAAGTGGTAATTGATAAAATTGGATTCTTGAACCCCTGAATCGAGTCAATATATGCATTATGCACACAGATGATAGCAAATGTAGATTTCATGTGGTTGCTATTATGAAATCCAATACAGTGGACATGTAGAATTTCAAGTGGCCCAATATTTGAAAATGTATATAATATT
Unaligned ( gi|13 ): GGCCCAATATCTGAAACATGATCGCATATTAATATACTCATTTGTACATATATTGGTGGCTGGCTAGTAGTTCACAGAAGTCATGCGCAATAGTTTGCTTATTGTCTGTTTTCGCTACTTAGTTAGAAT
Unaligned ( gi|15 ): TGGTTTCTTGCAAGAGCAAGAAAGGGTGTGAGGAGCTGCAAGTGCAAAAAGGCTGCCCTTCAATGCACAGCCCTCTGTGAATGTGAAGGGAACCGCACATGTTGATGAGCCAAGAACA
Unaligned ( gi|17 ): GCCATTTTGAAATCCAATATTGCGGACACATAGGGAAAATTTCAAGTGGCTCAATATCTGAAAAACATGTTAAAGTACATTTGTACCAAATTTGGTGCTTGTAT
Unaligned ( gi|19 ): AAAATGATCGTTTTCAACAGTATAGAGGTACATTTGTACCAAATTTGGGTGCTTGTATCACAAAATAGCGCATAATTTGCTAATGCTGTTTGCTATAT
Unaligned ( gi|22 ): CCTGTATCACAAATGCATAATTCTTTAGATTATTTGAGCTAACCCGCCCGC
Alignments
lowQualScore : 1111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111 1111111111111 11111111111111 111111111111111111111111
lowQualScore : 222 2 333 1 222 111 2 2 2 44444 22 2222222 33333 1 2 2 1 11 11 333333 22222 11 11 22 11 1 3333 222 11 11 1 11 2 2 22 1 2222 11 222222 11 1111111111111111111111111111111111111 2 22 2 44444 2 4444 2222222222 22 2 1 22 44444444 2 2 2 666666666666666666666666666666666666666666666666666666 222222 33 0000000000000 00000000000000 2 11 2 33333333333 33 33333333 333333333333333333333 333333 1 2 222 1 111 11 111 33 333 33 222 1 1 2222 1 1 1 6666666666666666 11 33333 1 2 11 4444444 2 22222 3333 22 333 3333 22 2222222 2 333333 1 222 11 1111 111 33333333333333 11 1 11 2 2 22 33 8888888888888 111 11 11 444444444444444444444444 1111 1111111 1 333 1 1 111 11 2222222 1 222222 333 22 555555555555555 11 111111 11 444444444444 333333333333333333333333 111 111 22222 11 11 22222 1111 11111 11 22222 111 1 11111 111 22 11 44444444444 222222 2222222 333333333 111 11 1111 111 1111 333333 111 111 1111 11 111 11111 99999999999999999999999 2 111 111 333333333 111 1111 111 4444444444444444444444 2222222 111111 111 1 22222
lowQualScore : 3 000 0 555 2 5 333 999 1 3 3 888 3 88888 44 1 7777777 1 6 33333 5 0 0 5 88 88 000000 66666 88 2 4 4 88 77 77 2 5 11 1 22 6 2222 1 77 1 444 44 44 0 0 6 11 6 5 77 0 0 77 3 6 1111 7 99 4 8 333333 0 0 44 3333333333333333333333333333333333333 1 7 7 3 00 6 3 1 88888 1 3 88 4444 0 7 7777 2222222222 44 22 1 3 1 7 4 0 1 44 44 0 1 1 99999999 0 0 11 1 1 3 0 3 6 3 888888888888888888888888888888888888888888888888888888 1 7 222222 7 00 1 22 4444444444444 77 44444444444444 1 888 3 1 0 0 33 3 888 1 3 1 44444444444 0 00 88888888 1 999999999999999999999 333333 1 5 0 3 1 555 6 2 6 444 44 111 1 00 0 7 666 00 1 1 6 0 22 2 777 1 2 0 0 8888 0 0 0 6 4 7777777777777777 1 33 2 00000 4 0 2 2 3 77 1 6 6 99 1 6 1 888 22 0000000 44 22 3 66666 0000 1 1 0 1 1 6 1 7 7 0 1 11 1 00 1 0 1 0 777 1 1111 44 6 6666666 6 7 7 0 3 333333 1 2 1 0 888 0 7 1 33 5555 444 6 11111111111111 7 1 0 888 1 33 4444 2 6 0 66 3 222 0 0 3 1 6 3 00 1 6 1 00 1111111111111 0 555 0 0 44 1 44 6 1 1 222222222222222222222222 9999 2222222 0 1 1 2 11 2 222 0 0 111 2 1 8 8 0 11 8 0 8 1 6666666 8 6 0 3 333333 555 1 4 0 4 44 1 3 3 0 999999999999999 3 8 8 44 11 111111 8 8 8 11 8 8 8 333333333333 8 555555555555555555555555 8 0 8 444 3 222 00000 11 11 00000 5 5555 2 8 8 8 33333 33 1 2 55555 666 0 77777 44 777 99999 2 55 6 3 11 1 77777777777 666666 8 3333333 111111111 111 11 8 1111 222 3 0 7777 1 000000 999 111 6 2222 2 00 5 2 3 000 5 6 8 66666 1 8 8 0 11111111111111111111111 8 0 6 3 6 999 99 111 0 1 111 333333333 6 6 111 99 6 6 6 6 3 6 6 4444 99 6 111 9999999999999999999999 6 6 1111111 999999 111 2 6 55555
lowQualScore : . ... . ... . . ... ... . . . ... . ..... .. . ....... . . ..... . . . . .. .. ...... ..... .. . . . .. .. .. . . .. . .. . .... . .. . ... .. .. . . . .. . . .. . . .. . . .... . .. . . ...... . . .. ..................................... . . . . .. . . . ..... . . .. .... . . .... .......... .. .. . . . . . . . .. .. . . . ........ . . .. . . . . . . . ...................................................... . . ...... . .. . .. ............. .. .............. . ... . . . . .. . ... . . . ........... . .. ........ . ..................... ...... . . . . . ... . . . ... .. ... . .. . . ... .. . . . . .. . ... . . . . .... . . . . . ................ . .. . ..... . . . . . .. . . . .. . . . ... .. ....... .. .. . ..... .... . . . . . . . . . . . .. . .. . . . . ... . .... .. . ....... . . . . . ...... . . . . ... . . . .. .... ... . .............. . . . ... . .. .... . . . .. . ... . . . . . . .. . . . .. ............. . ... . . .. . .. . . . ........................ .... ....... . . . . .. . ... . . ... . . . . . .. . . . . ....... . . . . ...... ... . . . . .. . . . . ............... . . . .. .. ...... . . . .. . . . ............ . ........................ . . . ... . ... ..... .. .. ..... . .... . . . . ..... .. . . ..... ... . ..... .. ... ..... . .. . . .. . ........... ...... . ....... ......... ... .. . .... ... . . .... . ...... ... ... . .... . .. . . . ... . . . ..... . . . . ....................... . . . . . ... .. ... . . ... ......... . . ... .. . . . . . . . .... .. . ... ...................... . . ....... ...... ... . . .....
lowQualScore : 0 555 0 000 5 0 333 777 0 3 7 777 3 33333 33 0 3333333 0 7 00000 5 0 0 0 00 55 000000 55555 55 5 0 0 00 55 55 5 5 77 0 00 7 7777 0 77 0 333 00 00 7 7 7 77 7 0 55 0 0 55 3 7 7777 3 00 7 0 000000 8 8 00 0000000000000000000000000000000000000 0 3 3 7 77 7 3 0 33333 0 7 33 0000 7 3 7777 7777777777 00 00 0 7 0 3 0 7 0 77 33 7 0 0 77777777 7 7 33 0 0 3 7 3 7 7 000000000000000000000000000000000000000000000000000000 0 3 333333 3 00 0 00 7777777777777 77 77777777777777 0 333 7 0 7 7 33 7 333 0 7 0 33333333333 7 00 77777777 0 777777777777777777777 777777 0 0 7 7 0 777 7 3 7 333 77 000 0 33 7 3 777 77 0 0 7 7 00 5 555 0 0 0 0 8888 0 0 0 5 2 2222222222222222 0 88 5 55555 0 0 5 5 3 33 0 7 7 33 0 7 0 777 00 0000000 77 00 3 00000 3333 0 0 7 0 0 7 0 3 3 7 0 77 0 77 0 7 0 7 333 0 0000 33 7 3333333 7 3 3 7 3 777777 0 0 0 7 000 7 3 0 00 0000 333 7 77777777777777 3 0 7 777 0 00 0000 0 7 7 00 7 777 7 7 7 0 7 7 77 0 7 0 00 7777777777777 7 333 7 7 77 0 00 7 0 0 333333333333333333333333 0000 3333333 0 0 0 5 88 5 555 0 0 000 5 0 0 0 8 88 0 8 0 4 0000000 0 0 8 8 000000 000 0 6 8 6 88 4 2 8 6 222222222222222 6 0 0 88 00 444444 0 0 0 00 0 0 0 000000000000 0 666666666666666666666666 0 8 0 000 8 444 00000 00 00 00000 0 4444 2 0 0 0 22222 88 0 0 00000 888 0 22222 55 555 55555 0 55 5 2 88 0 66666666666 888888 0 0000000 222222222 666 00 0 2222 222 8 8 0000 0 000000 333 777 7 7777 2 22 2 5 7 222 7 7 0 22222 0 0 0 8 44444444444444444444444 0 3 7 2 7 222 22 777 7 0 777 333333333 7 7 777 22 7 7 7 7 2 7 7 2222 22 7 777 8888888888888888888888 7 7 7777777 222222 777 5 0 00000
consensus : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTCCANC-GCTTCGGCAGC--GGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA-AG-AATGAATGCCTTGCAGTT-C-TGCAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGAT-TTACGATTTA--AAGAGCTT-GGATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTGG-T--AGGGGT-GTGGTAGT-----TGGTG----GCAGACTGAGATTTTAACATTGTATCA-TGA-GATGGTGGCAC-TGTGGG-----GCTG-CAAGAGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTGCG-AAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATA----CT-------------AATGTCTGAA------AGAA-------NCCAGGAATGACAGGGGAATCATCCTG--AGTTTGAAGACT-------------GGAACTAGAACTGTTGG-------------GTGTTCTTTC-AGGCAAGGATAGGTTAATNGTGTACCTC-GATGCTC-TGGA-GGT--GCCGG--TTCCACTGGT-CC-ACGGACTGGATCACATGTAGATTAT--TAGATTAGA-TACCAG-TGCA-ACCTGA-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCGATTGANNAGGCAC--AANCAG-AA-TAATGGCTG-CATC-AAAGGAGA-C-GGTGGAGCGGTCG----C-GCTCG--GACAATCCTA--GTGCCTTACGTCGC-NGGANGG-TTNCGGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGGGAGACTGCAAACA----ACATANGTCATTA-TGATCAG-ACG-CAAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGG-CAACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAG-C-TGGA-AACAAGGGAGATCG-G-GATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-A-CCAGAGAATGTCTGTTGGACAGAACGAAGGGCTGTGGCCGACCCCATTCGCC-AGT-ACAA-GCTGAAGGCGTTCAGCACTTCCACTCCAGGGTTCCAGAGAAAAGGTCAGCGA-TGNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCAACGAAAATCAGGCGTGTTCTATCTGCATTGTCTGATGGTG------TC--------TAC--GAGTGATCTC-CTCACATACTTAGCCTGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGA-C-TGTA-TT-TGCT-T-GATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATG-ACA-AACA-GATCGTCACCCCATA-------TATGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGG------GATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCATCTA-GGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAG-NC-CGAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CACTACCAATGT--TC-CACGCTCTCAC-TGGATGT-GACACTGTGTCTAGTTTT-C-ACTG--TC----TTTTGCTAGACGTGGCAAGAAG-ACTGCGTAG-GGCAATCTGGAC-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
Reference ( family-3946 ) : NCATTAAACGAGCATCA-GAGTGTTTTT---CGGTCTACAGATG---TGATTA-CACNGCGGTCCAAACGGGACATCCTGGGGTGTTAGTGGGTGCGAGATTCCGACCGGGGNTGTTGANTTNCCANCGGNTTCGGCAGCCGGGNCAAGATGAAGTTCATTTC-AATTT-CACAATAGAGGGAATAACGATGTTAAATGTAGTAGTTGTAATGATATAAATTACTGCAGTCGGAAGGA--GGTCTGTACGAGGGTTATNCTNAANNAGCGGCAAAAGAGGAATGNATGNCTTGNAGTTNCGTGCAGAACACCTCCGCCGAGNTTGAGAAGTAGAGGCT-GAAAAACAAA-CATC--CCGATTTACGTCGAGAT-TTACGATTTA--AAGAGCTTGAGATTTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTGGGTGAAGNGNTAGTGATAGTTTTAATGGTGTAGTGCAGACNGAGATTTTAACATTGTATCAATGANGATGGTGGCACGTGNGGGNNAGGGNTGTCAAGANGGTGTGCTTTGGGTGAAAGCACGTGTGA--GCCGANAATTGCGCANNGCANGGGCAAGCAGACTCNTTCTTGNGAGCATCCCNTGNACTTGCGCACGCGGAGAGNANAATTCGGANAGTGACTGCAGCGGCGCTNTANATGCCTGCAAGCACCGTGACCTACAGNCAATACTGTCTGGGAGAAACGAGGAATGTCTGAATTTTGAAGANTGGTGTTNNCAGGAANGACAGGGGAATCATCCTGCCAGTTTNANNACTAGGCAACCGTGCGGGAACNAGAACTGTTGGCTCAAATGTATGTGTGTNCNCGCTAGNCAGGGGTAGGTTAATGGTGCNCNTCAGNTGCTCGTGGAGGGTTGGCCGGGGTTCCACTGGTTCCAACGNACTGGATCACATNCAGATTGTGCTAGGTTGGAGTACCAGATGNAAACCNGACGGACATGGCCGTANCTNANCCACCAAACACCTAGATGTATCCAGGAAANANAAGGNAAGGCCGCTTNATCCCGTCAGAAAACCCCACAGAGATGGTGNTTTCTTNAATCCCGATTGANNAGGCA---AANCGG-AA-TAATGGC-G-CATC-AAAGGAGA-C-GGTGGAGCGGTCG----T-GCT----GACAANCCTA--GTGCCTTACGT-GC-CGGATGG-TTCCGGGACCAGAAGTGTGCCATGCAGGGTANTCGAAGAATCTCTCAGGNTGGGAACCAACANTGGGAGANNGCAAACAGCAGACATNGGTCNNTACTGATCAGTACGNCAAGTGTGATCAGGNCNCATTTGCGAAAGANGTNTGCTCTNTCGTCGGTGTCGTANAGGGNATNGGNCAACCCGNTCGAGGGGGNGAGTCAGGATTGAGTAGCNAAGNCGTGGAGNACAAGGGAGATCGAGTGATTCTGCTGACGTTATGAATGCCGAAGAGGTAT-ATGGNCAAGAGCAGTTCGAGGNTCTCCANCCAGAGAGTGTCTGTTGGNCAGAANGAAGGGNNNTGGCTGACCCCATTNGNCCAGNNANAGCGCTGANGGCGTTCAGNNCTTNCACTCCNGGGNNNNAGAGAAAAGGTCAGCGACNGGTCGCNNCCGTCAGAGACGATACGTGANCTCTTCGCACGCATAGTACACTGGNCTGCNAGACGAGANAGGTGGAATTCTTGACGAGTTCTTCCGTCAACGAGAATCAGGCGTGTTCTNTCTGCATTGTNTNATGGTGGAAGCCTCTGCACTGATACCAGAGTGATCTCGCTCACATACTTAGCCTGGAA-GTNTNCGACGCAAANACAGAGACTCCTGTCACGA-C-TGTA-TT-TGCT-T-GATGGAGCAGCCATCGTCCAGNTGCTGAAGCCGGCTGC-AT-TAAAGACCGTTGAAGAGTATG-ACA-AACA-GATCGTCACCCCATA-------TATGT-CCACGAAGCTGCAAA-AGTGACACACCTGAATCGGGTCTGG------GATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACANTCGCAAAGCGGAGACGAGGC-TGCGGAGATGTGTGGTGGCTGCCGCNGCCAAACCAAG--AAACC--T-GCAGGAAACTGGCAGAACT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---CCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CATTCG-CCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--AAT-GC--TCCTCACGCAG---CCCAGAACGNACACCGTGC-AAATACTCATCTA-GGGCTNTAGACAC------C--CGATGT-TAGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--ANTGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAG-NC-CGAGA-TTTCCGATACCTAGCAGCAN--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CACTACCAATGT--TC-CACGCTCTCNC-TGGATGT-GACACTGTGTCTAGTTTT---ACT---TC----TTTTGCTAGACGTGGCAAGAAG-ACTGCGCGG-GGCAATCTGGAC-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGATGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
gi|1 : CATTACACC--CATCAAGGGTGTTTTTTTTCGTCCTA-AGATGGCCTGATTAACACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTTCAATCGCTTCGGCAGC--GACTAAGATGA-GTTCATTTCCAATTTTCACAATA-AGG--AT--CGAT------TGT-----CTG--ATTAAATATATTACTGCA--CGGAAGGAAGGGTTTGTA--ACGGTT-TCTTAAACCAGCGACAAAATAG--ATGAATGCCTTGCAGTT-CTTGC-GAACACCTCTGTCGAATTTGAGAA-TAGA--CTCAAAAAACAAAACATCACCCGATTTACGTCGAGATCTTACGATC-A--AAG-GCTT---ATCTTATG-TAGCTAT------TAACTTGATTCTGGTGGTG-GTGGTAG-T--AGGGGTTGTGGTAAT-----------------AACTGAGATGTTAACATTGCATCA-TGA-GATGGTGGCAC-TGTGGA-----GCTG-CAAGAGGGTG-G--TTGAGTGAAAGCACTTGTGAAAGCCGATA-TTGCA-AAAGCAGGGGCA-GCAGACTCCTTCCTGAGGGCATCTCGTGT-CTTGCGCACAAGAAGAGCAAA--TC---AAGTGACTGTAGCAGCATTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCA-------CT-------------AATGTCTGAA------AGAA-------ACCAGGAATG-CAGAGGA--CATCCTG--AGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATCG-TTAATTATGTACCTC-GATGCTC-TG-ACGAT--GCTGG--TTCCAC--GTGC--ACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTGAAGGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAAT-TAAGATAAGGCTACTTCA--CCATCAGAAAAC---ACAGAG--GGTGTTCTCTTCAATCCCAATTGACCAGGCAC--AAGCAG-AA-CAATAGCTG-CATC-AAAGGAGA-C-GGTGGAGCAGTTG----G-GCTCACTGACAATCCTA--GTGCCTTACGTCGC-AGGAAGG-TTCTGGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCT-TCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TACGTCATTA-TGATCAG-ACGCCAAGTGT-AT-AGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCATAGAGGAGATGGG-CAACCCGTTCGAGGAGGGGAATCAGGAT---GTAGCCAAAC--TGGA-AACAAGGGAGATCGCA-GATCCTGCTGACGTTATGAATGTC-AAGAGG-ATCATGGCCAAGAGCAGTTCAAGGCTTTC--ACCAGAGAATGTCTGTTGGACAGAACAAAGG-CTGTGGTCGACCCCATTCCTC--GTAACAA-GCTGAAGGTGTTCAGCACTTCCACTCCAAGGTTCCAGAACAAAGGTCAGCAAATGCTCGTCTCCGTCAAGAACGAC-CGTGAACTCTTCGCACGCAT-GTACACTG-TCTGCCAGACGAGAGA--TGGAA------AC-----CTTTCGTCA-TGAAAATCAGGCATGT-CTATCTGCATTGTCTGATGGTA------TC-------------GAGTGATCTC-CTCACATGCTTAGCTTGGAA-GTTTCCGACGCAAGTACAGAAACTCCTGTCACGA-CCTGTA-TT-TGCT-T-GATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACA-AACA-GATCGTCACCCTAGA-------TATGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGG------GATAGTTACTTTGCTGATTCACTGAAATGCAGT-GTACACTTGCAAAGCAGAGACAAGGCTTGCGAAGATTTTTGGTGGCTGCCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAGCT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAG--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGGAATAG-TTT-----CA---CC-AGGA-G-----GACAA-ACAACT-TG---TCATTACTGACGA-CGA-----AGG--AGTGCTC--AGCAAGCCACTACTGCCAGGCCAGATCTGACT--C-CACTCG-TCCC-ATTT-AA-CCGACTAAAGAAGCTGAAGCATTCAGAT-A---TGCTGTCAAT-GCAATCTTCAAACAG---CCCAGAACAGACACCATGC-AAATA-TCA-CTACGGGCTATAGACACATCGATC--CGATGT-TAAG-G-CTGG--C----AGTC---GTG--CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTC---GCATGGG--ATT---CCGA-ACAG-TC-CGAGT-TTTTCGATAACTAGGGGCAG--ATTG-AATAGCAACTGGATGGGAACAA-GAGAAGGCTCATGCCATTG-CAATGT--TTACACACTCTCACGTGAATATCGACACTGTGTCTAGTTTTTCCACTG--TCGTAGTTTTGCTAGACGTGGCCAGAAGAACTGCGCAGTGGCAGTCT-GAC-GGTACTGTC-CAG--AATT---CACAGTCTAAGC---------GCT-GCTGCTGC-TGTCCT---CTGC--ACC-GC-ATG-AT-A-AT-CAGAACGACGCAATG----CGCA--TCA-T---CGAAAGG------GTG--CCGTTTG----ATCGAACT-AGGCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAAATCTTCCGCAATTAAAGAAAGAACAAT
gi|12 : aGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACA-AACA-GATCGTCACCCTATA-------TATGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGG------GATAGTTACTTTGCTGATTCACTGAAATGCAa
gi|14 : A-AATAGCAGCTGGATTGGGATGA-GAGATGACTCATG-CACTACCAATGT--TC-CACGCTCTCTC-TGGAGGT-GACACTGTGTCTAGTTTT---GCT---TC-------------ACGTGGCAAGAAG-ACTGCAT-G-GGTAATCTAAAC-
gi|16 : GCAGCTGGATTGGGATGA-GAGAAGGCTCATA-CACTACCAATGC--GC-CACACTCTCTC-TGGATGT-GACACTGTGCCTAGTTTT---ACT---TC-------------ATGTGGCAAGAAG-ACTGCAT-G-GGCAATCT
gi|18 : ATTGAACAGG-----AATCGGTGA-TAATGGCTG-CATC-AAAGGAAA-C-GATGGAGCAGTCGGTCTC-GCT----GACAAACCTA--GTGCCTGACGTCGC-TGGATGG-TTGCTGGACaaa
gi|2 : CATTAAACGAGCATCA-GAGTGTTTTT---CGGTCTACAGATG---TGATTA-CACAGCGGTCCAAACGGGACATTCTGGGGTGTTAGTGGGTGCGAGATTCCGACCGGGGTTGTTGATTTTC-ATTGGATT-GGCAGTCGG-ACAAGATGAAGTTCATTTC-AATTT-CACAATAGAGGGAATAACGATGTTAAATGTAGTAGTTGTAATGATATAAATTACTGCAGTCGGAAGGA--GGTCTGTACGAGGGTTATATTTAAACAG-GGCAAAA----AGTGAATGG-TTGAAGTTATGTGCAGAACAC-TCTGTCGAAATT-AGAAGTAGAGGCT-GAAAAACAAA-CATC--CCGATTTACGTCGAGAT-TTACGATTTA--AAGAGCTTGAGATTTTATGGTAGGTGTGAATGTTGAATTGAT-ATGG--GTGAGTGGTGAGTGAAGGGTT--TG----------TGGTATAGTGTAGACTGAG--TTTAACATTGT--CAATGAGGATGGTGG-ACGTGTGGGAT---GCTGTCAAGAGGGTGTGCTTTGAGTGAAAGCA-GTGTGA--GCCGATAATTGGACAAAGCAGGGGCAAGCAGACTCCT-CTTG--AGCATCTCGTGGATTTGCGCACATAGAGAGAAAAATTCGGAAAGTGACTGTAATGGCATTGTACATGCTTGCAAGCAC-GTGACCTACAGT--ATA---------------------TGTCTGAA------AGAA-------CACAGGAATGACAGGAGAATCATCCTG--AGTTTGAAGACT-------------GGAA-TAGAACTGTTG--------------GTGTACTTGCTAGGCAAGGATAGGTTAATAGT-CACGTCAGATGCTTGTGAAGAGTTGGCTGGGGTTCCACTG----CAACGGACTGGATCACATGTAGA--G---TAGATTAGAGTATCAGATAGAAACCTGA-GGACATGGTGGTAACTGAGC--CCAAACACC-AGATGTAT-CAGGAAATATAAGATAAAG--GCTTAATCCCATCAG-AAAC----CAGAG--GGTGATTTCTTAAAT-CCAATTGAGGAGGCA---AGCTAG-AACTAATGG-----ATCAAAAGGAGAGCGGGTGGAGCGGTTG----TAACTTG--AACAATCCTAAGGTG-CTTACGT-GCAGGGAAGGTTTCTGGGA-CAGAAGTGTGTCATGCAGGGTACTCGAA-AATCTTTCAGGTTGGAAA-CAACAATGGGAGAATGCAA-------ACATTAGTCCATACTGATCAGTACG-CAAGTGTGATTAGGATACATTTACGAAAGAAGTTTGCT-TGTCG-CGA-GTTGTATAGGGGATGGGCCAACCGGATCGAGAGAAGGAATCAGGATTGAATAGCCAAGACGTGGAGAACAAGGGAGATCGAGTGATTCTGCTGACGTTATG-ATGTCGAAGAGGTAT--TGGCCAAGAGCAGTTC-AGGCTTTCCACCCAGAGAATGTCTG-TGGCCAGAAAGAAAGGCTGTG---GA-CCCATTAGCTCAGTCAAAACGC-GAAGGTGTTCAAAA-TTACACTCCT-GGTTACAGA-AAAAGGT-AGCAA-TGATAGTATCCGTCAGAGACGATACGTGAACTCTTCGCACG-ATAGTACACTGGTCTGCCA-ACGAGAGAGGTGGAA------ACG----CTTTCGTCAATGAAAATCAGGCATG-TCTATC-G-ATTGTCTGATG-------------------TAT--GAGTGATCTCGCTCACATACTTAG--TGGAA-GTTCTCGACG-AACGTTAGAAACTCATGT--CGA---TGTA-TT-TGCTATGGATGGAG-AG-CATCGTCCAGTTGCTGAAGCCGG-TGTGATGTAAAAACTG-TGAAGAGTAAG-GAA-AACATGGTCAT-ACTGAATA-------TATGTGCCACGAAGCTGCAAA-AGTGAC-TACATG-ATCGGGTCTGGATAGTTAGTAGTTACTTTGCTGATTCACTGAAATGCAGT---ACACTTGCAAAGCAGAGACAAGGCTTGCGGAGATTTTTGGTGGCTACCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAACT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAA--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGAAATAT-TTT-----GA---CC-AGGA-G-----GACAA-ACAACT-TG---TCATTACGGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATAT-TA-CCA--TAAAGAAGCTGA--CATTCAGATAT---TGCTG--CAT-GC--ATCTCAAACAG---CCCAGAACAGACACCATGC--AATATTCATCT--GGGCTATAGACATGCA---C--CGATGT-TAA--G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGC-AACCAG-AAAGAC----AAACTG---GC-TGGG--ATT---CGGA-ACAGTCC-CGAG--TTTTCGATAACTAGGGGCAG--ATGA-AATAGCAACTGGATTGGGACAA-GAGAAGGATCATG-CATTGCCAATGTTATA-CACACTCTCAC-TGAATAC-GACACTGTGTCTAGTTTTCC-ACTGTGTCTAG-TTTTGCTAGACGTGGCAAGAAG-ACTGCGCAG-GGCAGTCTGGAC-GGTACTG-C-CAG--AATT---CACAG---AAGC---------GTT-GCTGCTGC-AGTCCT---CTGC--ACC-GC-ATG-AC-ATAA-CAG-ACGACGCAATG----CGCA--TCA-T---CGAAAGG-T---T-CGA-----TTG----ATCGAACT-A-GCAA-------ATGCAC--------A---C----ACAAGGCCAGGAGGAAAATCTT-CG
gi|20 : G---TGAT---CACTGCG-TCCAA-CGGAACA-CTTGGGGTATTAGTGA-TGCA-----CCGACCGGG-ATGTTGAATTG-CACC-GCTTCAGCAGC--GGACAAGAT
gi|21 : tgTCCTAAACGAACGGCAAAAGAAGAATGTATGCCTTACAGTTTC-TGCA-AACACC-CCGCC-AGTTTGA
gi|3 : ttATG-TAGCTAT------TGGCTTGATTTTGGTGGTGA-TGGTGG-T--AGCGGTAGTGATAGTTTTAATGGTG----ACA-ACAGAAATTTTAACATTGTATTA-TGAT-ATAGTGGCAC-TGGGGGTAAGGGATG-CAAG-TAGTG-G--TTGGATG----CACGC-TGA--G------ATTACG-ACTGCATGGACA-GCAGACTCGTTCTTGCGAGCATCCCTTGT-CTTGCACACGCGAAGAACACA--TC---CAGTGACTGCAGCAGCGCTCTAAAT-CCTGCAA-CACCGTG-CCTACAAACAATACTGTCTGGGAGAAACGAGGAATGTTTGAATTTTGAAGACTGGTGTTGCCAGAAAGGAGAGG---AT-ATCC-GCCAGTTTCATTACTAGGCAACCGTGCGGGAACAAAAACTGTTGGCTCAAATGTATGTGTGTTCGCTC-AATTAGGAGTA-GTTAATGGTGTTCCTT-GTTGCTC-TGGA-GGT--GCCGG---TCCACTGGTTCC-ACGCACTGGATCACATCC--ATTATGCTAGG-TGGA-TACTAG-TGC--ATCAGACGGACATGGCCA-ACCTC-TCCACCAAACACCTAGATATATCCAGGAAAAGAAAGG-AAGGCCACTTCA--CCGTTAAAAAACCCCACAGAGATGGTGTTTTCTTTAATCCCGATTGACAAGACACATGAACAG-AA-TAATGAC-GACATC-AAGGGAGA-C-G-----------------------------ACCCTA--GTGCCCTACGTGGT-CGGATAA-TTGCGGGACCAGAAAT-TGC----TAGAGTAATCGAAGAAT-TC-CAAGATGAGAACCAACACT-AGAGACGGCAAACAGCAGACATAGGTCATTA-TGATCAGAA--ACAAGTGTA--CAGGCCTCATTTGTGAAAGATGTATGCTCTCTCGTCGGTATCATAGAGAATATTGGA-AACTCACTCAAGGAGGTGAGTCAAGAT---GTAGTAAA--CCTGGA-CACAAAG--------------CTG-TG-----ATGAATGCC-AAGAGA-AT-A-GGATAAGAGCAGTTCGAGGATCTCAA--CAGAGAGTGTCTGTTGGACAGAAC-AAGGAAATTGGCTGACCCCATTCACCAAG--ACAG-GCTGATGGCATTCAGCCCTTCCACTCCAGGGAGCAAGAGAAAAGGTCAGTGACAGGTCACCGCCGTCAAAAATAAT-TTTGATCTCTTTGTACGCAT-GTACATTGG-CTGCAAGATGAGATA--TGAAATTCTTGACGAGTTCTTCCGTC-ACGAGAATCAGGCGTGTTCTCT-TGCATTGTGTTATGGTGGAAGCCTCTGCACTGATACCAAAGTGAT----CTCACATA-----CCTGGAATATGTATAACGCAAAAACAGAGACTTCTGTCACAACC-TGTA-TTGTGCT-T-GATGGATCAGCCATTGTCCAGATGCTAAAGATAACTGC-AT-TAAAGGCCTTTGAAGAGTATG--CACAACA-GATCGTCACCCCGTATACCAGGTATAT-GCGCGAAGCTGTAAACAGTATCACTCCTGAATCTGGTCTGG------AATACTTACCTCGCTGATTTACTGAAATGCAGT---ACATATGCAAAGCGGAG--------TGCGAAGATGTGTGATGGCTG----------------------C--T-GCAGGAAACTGACATAACT-TCCTAAGAATG-GACGGCTT--AAAAAC--AG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CTAATTGCCAGTTATCAGGGAATGA-TTT-----GA---CT-A----G-----GACAA-GCAACT-CG---CGATTGCTGATGG-AGA-----GGC--AGTTCTC--AGCAAACAACTACT-----GCCAGATCTTACC--T-TATTCGCCCCC-ATGT-AA-TCA--TAAAAAAGCTGA--CAGTCAAATGC---TGCTG--AAT-GT--TTCTCACGCAG---CCCAACATTCACACCGTTC--AATACTCATCTA--GACTCTAGACA-------C--TAATGT-T-GT-G-CTGG--A----AGT----AT---CCCTA--GCA--CA-GGA--TATGC-AACCAGAAGAAAA----AATATG---AC-TGGC--ATT---CGGA-ACAG-T--TAAGAGTTTCCAATACCTAATAGCAC--ATGA-AATAGCACCT
gi|4 : aGAA-GTCTCCGACGCAAAGACAGAGAATCCTTTCACGAAC-TGTAATT-TGCT-T-GATGGAGCAGCCATTGTCCAGGTGCTGAAGCCAGCTTC-AT-CAAAGACCTTTGAAGAGTATTCACA-A-CA-GGTCGTCATTCCATA-------TATGT-CCACGAAACTGCGAATAGTGACACACCTAGATCTGATCTGG------GATACTTACCTTCCTGATTCACTGAAAGGTAGTAG-ACAGTCACAGAG--GGGACAAGGCGTGCTGAGACGTGTGGTGGCTGCCGCTGCCAAACCA----------------GGAAACTGGCAGACCT-TGCTACCGATGTGACAGCAA--CAAGACTGAAACCTGGTTCAGG-TT-CCCTT-CT-CAGCAG-CT------------TCATGGAATGGCTTT-----GA---CCCAGGGGA-----GACAA-ACA-CT-CG---TCATTTCTTATG---GA-----ATGCCAGTGCTCCCAGCAAGCCACAACT-----GCCAGAT-TGACT--TACAATTG-TCC--ATGT-AAACCCACCGAAAAAGCTGA--CAATTGGATGGGGTTGCTG--CATTGC--CTATTACACAAGTTCCCAG--TGTACACCATGCCAAATACTTATCCG-GGACCTTGGACAC------C---GATGTCTGGCTG-CTGG--CCCCCAGT----GT---CCCTT--GCATCCA-GGA--GTTGCAA-TCATGTAAGAC----AACCTG----TGTTACTAATT---TGGA-ACAG-GC-TAGAA-TTTCAGATACCTAGCAGCAA--ATGA-AATAGCAGCTGGATTTGGACGA-TAGAAGGCTCATG-CACTACCAATGT--TT-CACGCTCTCAC-TGGATGT-GACACTGCGTCTAA--TT---A--------------TGCGAGAAGTGGCAAGAAG-ACTACAT-G-GACAAACTGGAC-GGTACTG-C-AAT--AACT---CACTG---AGGCGCTGCTGCTGCT-GCTGCTGC-TGTCAT---TTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGATGCAATG----TGCA--TCA-T---CGAGAGG-TC--CGTGATCCTTTTATATGATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATATT-CGC-----AAGGAAGAACAATt
gi|4 : tgcttggaaTTGAAAT-CTAC-ATTTGCTGATATCTCTGGATATAATG-TAGCTAT------TGACTTGATTCTGGTgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagataccagaatcaagtcaatagctacattatatccagagatatcagcaaatgtagatttcaagtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : tgcttggaagaagtctccgacgcaaagacagagaatcctttcacgaactgtaatttgcttgatggagcagccattgtccaggtgctgaagccagcttcatcaaagacctttgaagagtattcacaacaggtcgtcattccatatatgtccacgaaactgcgaatagtgacacacctagatctgatctgggatacttaccttcctgattcactgaaaggtagtagacagtcacagaggggacaaggcgtgctgagacgtgtggtggctgccgctgccaaaccaggaaactggcagaccttgctaccgatgtgacagcaacaagactgaaacctggttcaggttcccttctcagcagcttcatggaatggctttgacccaggggagacaaacactcgtcatttcttatggaatgccagtgctcccagcaagccacaactgccagattgacttacaattgtccatgtaaacccaccgaaaaagctgacaattggatggggttgctgcattgcctattacacaagttcccagtgtacaccatgccaaatacttatccgggaccttggacaccgatgtctggctgctggcccccagtgtcccttgcatccaggagttgcaatcatgtaagacaacctgtgttactaatttggaacaggctagaatttcagatacctagcagcaaatgaaatagcagctggatttggacgatagaaggctcatgcactaccaatgtttcacgctctcactggatgtgacactgcgtctaattatgcgagaagtggcaagaagactacatggacaaactggacggtactgcaataactcactgaggcgctgctgctgctgctgctgctgtcatttgcaccgcgtgacataccagacgatgcaatgtgcatcatcgagaggtccgtgatccttttatatgatcgaaccagcaaatgcacagacattgacaaggccaggaggaaaatattcgcaaggaagaacaatgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagatAG--AACT---CACCG---AGGC---------GCT-GCTGCTGC-TGTCAT---TTGC--ACC-CT-GCG-AC-ATAC-CAG-ACAATGCAATG----CGCA--TCA-T---TCAGAG-----------------------ATCGAAAC-A-GCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAGAgtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : TATG-TAGCTAT------TGACTTGATTCTGGTacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacataccagaatcaagtcaatagctacatatcagcaaatgtagatttcaagt
gi|6 : agaactcaccgaggcgctgctgctgctgtcatttgcaccctgcgacataccagacaatgcaatgcgcatcattcagagatcgaaacagcaaatgcacagacattaacaaggccaggaggaagaacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacatCCA-GGACTGTAGACAC------CAATGCTGT-AGGT-GACTGGTGC----AGTTCGTGTTCGCCATGCATCA--TATGGAGTATTGCAA-CGAGAAA-GACTAGAGAACTGTGAGTATGGACTATTGCATGAAGACAG-ACGCCAGA-ATTCT-ATAACTGGTAGCAGCCATGAGAATAGCAGCTGGATTGGGACGACAAGAAGGtcagcaaatgtagatttcaagt
gi|6 : cagcattaggcaGACAGGTACTG-TACAATTAACTTCGCGTGA---AGGCA--------GCTAGCTGC-GCATGTCATGACTTGCCAGCCAGCAGTGGACTAGACACAG-ACGATGCA-TGAGCACGCAATTCAGTGGGCGAGAGG-TGGTCGTGATCCTTTTGTAT-ATCGAACCGA-GCAAGAATAAGATGTAC------AGAGATCATTGACG----CAGGGAGAAAATCTTGGGC-----AAGGAAGAgcatggtacagcggatagactcaaagtcaatgtcttcaacgtggaatgtccaccactcgttagtcaacatgtatattgctaggagagtggcagacattatctcattacgacaatgctagaagacaggtactgtacaattaacttcgcgtgaaggcagctagctgcgcatgtcatgacttgccagccagcagtggactagacacagacgatgcatgagcacgcaattcagtgggcgagaggtggtcgtgatccttttgtatatcgaaccgagcaagaataagatgtacagagatcattgacgcagggagaaaatcttgggcaaggaagacgaatgagtgcatcgctcatccctccaaacgaaggcagcgtcgttggcggaacatgtaaagagcggcaggtgtatcaagaaatggtgtgtgagcagatactgggatcccaacacacaaatcgtccgccaacaaccaactggggttggtcaaggacgtgaaggacagtacacaccttactggaccgctaccctgattgcagctcacagcgatatgagcatggttttcatgtgcaaaagcagaacagggtagtgggacg
gi|7 : cagcattaggcaccaggactgtagacaccaatgctgtaggtgactggtgcagttcgtgttcgccatgcatcatatggagtattgcaacgagaaagactagagaactgtgagtatggactattgcatgaagacagacgccagaattctataactggtagcagccatgagaatagcagctggattgggacgacaagaagggcatggtacagcggatagactcaaagtcaatgtcttcaacgtggaatgtccaccactcgttagtcaacatgtatattgctaggagagtggcagacattatctcattacgacaatgctagaaTGGC--ATT---TGGA-GCAG-GC-CAGAA-TTTCCTATACCTAGCAGCAC--ATGA-AATAGCAGCTGGcgaatgagtgcatcgctcatccctccaaacgaaggcagcgtcgttggcggaacatgtaaagagcggcaggtgtatcaagaaatggtgtgtgagcagatactgggatcccaacacacaaatcgtccgccaacaaccaactggggttggtcaaggacgtgaaggacagtacacaccttactggaccgctaccctgattgcagctcacagcgatatgagcatggttttcatgtgcaaaagcagaacagggtagtgggacg
gi|7 : tggtGG-GACAATCTGGAC-GGTACTG-C-CAG--AACT---CGCTG---AGGC---------ACT-GCTGCTGC-TGTCAT---CTGC--ACC-AC-GTG-AC-ATAC-CAG-ACGATGCAATG----CGCA--TCA-T---CGAGAGGTT---CGTGATCCTTTTGTATAATCGAACC-A-GCAA-------ATACATGTACAGAGA---CATTGACAAG----GGAAGAAAATCTT-CGC-----AAGGAAGAACAATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggacaatctggacggtactgccagaactcgctgaggcactgctgctgctgtcatctgcaccacgtgacataccagacgatgcaatgcgcatcatcgagaggttcgtgatccttttgtataatcgaaccagcaaatacatgtacagagacattgacaagggaagaaaatcttcgcaaggaagaacaatgagcagctcatccctccaacgaaggcagctctggaggaacatgtaaagagggcagtgtatcaaggaaatgtgtgtagtcagatactgctaccaacaccaaatcgtcctccaccaaccaactggggttggtcaag
gi|9 : tggttggcatttggagcaggccagaatttcctatacctagcagcacatgaaatagcagctggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACAAGGCAGTGACGAGAC--ACGTCGATGTAT-----CTGCCGATGCCACAC--AGTAAAACC--T-GCAGAGAGCTCTCCGACGTATTCGACGAACG-GAT-GCCAAACAAGATAG-G--CTG-TTCAGGATTGCC--TGCTGCAGCAGGCT-----C------TCATGGAATGG-TTTTGTTTGAACACT-ATAAGGCGATAGACGAGACAACTTCGATACCAATACTGA-GATAGATAATGAGG--AATGCTC--AGCAAGACA-TCCT-----GCCAGATCT-ACTTAC-AATTCG-CCCCAACGTGAG-AGGACGACAGAAGCTGgagcagctcatccctccaacgaaggcagctctggaggaacatgtaaagagggcagtgtatcaaggaaatgtgtgtagtcagatactgctaccaacaccaaatcgtcctccaccaaccaactggggttggtcaag
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CCATTTTAGAAGAATGTCAGTGTAATCTAGCTTCAGATGCTAGACCATATAGCATGTCAGTATTATACCTAAGACATTTACAGGACTAATTAAGCCATTCATTTTAAAGTATTGTGTTGAATCCAATTTTTGCCTAGATAATTTCCAAATACAATCACGTGACATACTGTGGTAGATAATATCAAGTTGAAATTGGTACCATTGGATTTCTTGCGCCCACCCCAACATATACATATTTAGATATTAAAATCAAGTCAATAGCAGCATTGTGTCAAGAGATAATAGCATTTGGATTTCAAGTTGCGGCCATTTTGAAATCCAATATGGCGGACTTACAGAGAGAATTTCAAGTGGCCCAATAACTGAAAATGTTCGTAACATATTAATGAATATTTGTGCCAAATTTGGTGCTTGCATACCGAATTGTACACTTCTTACAAATACCGGTATTTGGGCTAAGCCGCCCGACTAAAA
Unaligned ( gi|10 ): TGCGCTACAATGCCCCAATAAAGATACATTTAGATTCCGGAATAACTGCAATATATCCACAGATAATAGCAAATGTATATTTCAAGTAGCGGCCATTTTGAAATCCAATATGGTGGGCACTTAAAAAGAATTTCAAGAGGCGCAATATCTGAAAATGTTTGCAACATGTTAGTGTACATTTGTGCAAAATGTGGTGCTTGTATCACAAAATGCACAACAGGTTTGCTATGCTGCTCCGCTATTATAAC
Unaligned ( gi|11 ): TTGACAATACCAAGTGGTAATTGATAAAATTGGATTCTTGAACCCCTGAATCGAGTCAATATATGCATTATGCACACAGATGATAGCAAATGTAGATTTCATGTGGTTGCTATTATGAAATCCAATACAGTGGACATGTAGAATTTCAAGTGGCCCAATATTTGAAAATGTATATAATATT
Unaligned ( gi|13 ): GGCCCAATATCTGAAACATGATCGCATATTAATATACTCATTTGTACATATATTGGTGGCTGGCTAGTAGTTCACAGAAGTCATGCGCAATAGTTTGCTTATTGTCTGTTTTCGCTACTTAGTTAGAAT
Unaligned ( gi|15 ): TGGTTTCTTGCAAGAGCAAGAAAGGGTGTGAGGAGCTGCAAGTGCAAAAAGGCTGCCCTTCAATGCACAGCCCTCTGTGAATGTGAAGGGAACCGCACATGTTGATGAGCCAAGAACA
Unaligned ( gi|17 ): GCCATTTTGAAATCCAATATTGCGGACACATAGGGAAAATTTCAAGTGGCTCAATATCTGAAAAACATGTTAAAGTACATTTGTACCAAATTTGGTGCTTGTAT
Unaligned ( gi|19 ): AAAATGATCGTTTTCAACAGTATAGAGGTACATTTGTACCAAATTTGGGTGCTTGTATCACAAAATAGCGCATAATTTGCTAATGCTGTTTGCTATAT
Unaligned ( gi|22 ): CCTGTATCACAAATGCATAATTCTTTAGATTATTTGAGCTAACCCGCCCGC
Alignments
lowQualScore : 111111111111111111111111 1111111111111111111111111
lowQualScore : 111 1 222 1 222 111 1 1 1 2222 1 2222 1 1 1 1 1 11 11 333333 22222 11 11 11 11 1 22222 1 2222222 11 1 11 1 1 11 1 1 444444444444444 111 222222 11 1 1 44 8888888888888888 1 1 1 55555 1 1 2222 1111 11 2222 1 33 1 11 222 1 1 1 111111111111111111111111 555555555555555555 11 22 7777777777777 99999999999999 1 2 1 1 11 222 22222 11 4444 2 1 111 2 2 1 1 1 1 111 11 3333 11 11 1 1 1 1 11 555555555555 11 1 1 1 11 2 6666666 1 1 1 3333 1 222 2222 1 44444444 1 1 222 1 1 1 1 11 2222222222222 11 1 222 1 1 11 11 5555555555555 22 2 11 1111111111111111111111111 22 222222 1 333 1 1 1 1 1 1 2222222 1 222222 333 1 555555555555555 11 111111 11 444444444444 22222 111 33333333 111 111 22222 11 11 22222 1111 11111 11 22222 111 1 111 111 11 44444444444 222222 2222222 333333333 111 11 1111 2 1 1111 333333 111 111 11111111 111 1 111111111111 1111 1 11 77777777777777777777777 111 333333 111 111 111 333333333 111 1111 111 4444444444444444444444 2222222 111111 111 1 22222
lowQualScore : 1 999 5 111 1 5 333 999 3 3 3 7 3 8888 6 3 8888 3 5 5 5 5 88 88 000000 66666 88 1 1 1 88 88 77 1 5 6 55555 6 3 5555555 44 0 6 6 5 77 5 5 88 0 5 222222222222222 111 8 333333 0 0 44 3 3 55 6666666666666666 7 7 3 3 6 3 11111 3 3 6 1111 7 2222 88 7777777 0000 3 7 33 3 11 88 333 0 0 3 3 6 3 000000000000000000000000 333333333333333333 44 0 00 7 3333333333333 6 66666666666666 3 3 1 6 3 3 88 3 333 7 44444 00 1111 3 3 777 3 6 3 3 7 2 6 2 7 111 88 0 7 0000 88 1 77 22 2 8 33 1 0 0 555 0 0 66 4 111111111111 1 33 2 8 1 0 1 1 0 6 3 7 6 6 99 6 3 5555555 1 3 3 3 0000 0 6 7 7 0 3 1 333 0000 3 6 00000000 6 6 7 3 3 888 2 3 3 7 0 2 6 55 6 3 6666666666666 7 0 6 11 2 6 0 222 1 3 6 3 44 6 88 4444444444444 44 0 3 44 6 3333333333333333333333333 00 222222 0 0 0 2 11 3 222 0 0 0 0 2 1 8 8 0 6 0 8 1 6666666 8 6 0 0 333333 555 0 0 0 1 1 8 0 666666666666666 1 8 8 44 11 111111 8 8 8 11 8 8 8 333333333333 8 00000 444 8 33333333 8 0 8 444 3 222 00000 11 11 00000 5 5555 1 8 8 8 33333 33 1 2 55555 444 0 555 0 1 777 99999 33 3 6 3 8 3 1 77777777777 666666 8 3333333 111111111 111 11 8 1111 0 0 0 7777 1 000000 999 111 6 1 22222222 5 1 1 000 5 5 1 666666666666 6666 5 1 5 33 66666666666666666666666 1 77 5 000 0 111111 5 5 3 111 6 999 99 111 0 1 111 333333333 6 6 111 99 6 6 6 6 3 6 6 0 4444 99 6 111 9999999999999999999999 6 6 1111111 999999 111 2 6 55555
lowQualScore : . ... . ... . . ... ... . . . . . .... . . .... . . . . . .. .. ...... ..... .. . . . .. .. .. . . . ..... . . ....... .. . . . . .. . . .. . . ............... ... . ...... . . .. . . .. ................ . . . . . . ..... . . . .... . .... .. ....... .... . . .. . .. .. ... . . . . . . ........................ .................. .. . .. . ............. . .............. . . . . . . .. . ... . ..... .. .... . . ... . . . . . . . . . ... .. . . .... .. . .. .. . . .. . . . ... . . .. . ............ . .. . . . . . . . . . . . . .. . . ....... . . . . .... . . . . . . . ... .... . . ........ . . . . . ... . . . . . . . .. . . ............. . . . .. . . . ... . . . . .. . .. ............. .. . . .. . ......................... .. ...... . . . . .. . ... . . . . . . . . . . . . . ....... . . . . ...... ... . . . . . . . ............... . . . .. .. ...... . . . .. . . . ............ . ..... ... . ........ . . . ... . ... ..... .. .. ..... . .... . . . . ..... .. . . ..... ... . ... . . ... ..... .. . . . . . . ........... ...... . ....... ......... ... .. . .... . . . .... . ...... ... ... . . ........ . . . ... . . . ............ .... . . . .. ....................... . .. . ... . ...... . . . ... . ... .. ... . . ... ......... . . ... .. . . . . . . . . .... .. . ... ...................... . . ....... ...... ... . . .....
lowQualScore : 0 000 5 555 0 0 333 777 7 3 3 3 3 3333 7 3 7777 3 5 0 5 0 00 55 000000 55555 55 0 0 0 00 00 55 0 5 7 77777 7 3 7777777 00 7 7 7 0 55 0 5 00 0 0 888888888888888 222 0 000000 8 8 00 3 3 00 0000000000000000 3 3 3 3 7 3 77777 3 3 7 7777 3 3333 33 7777777 3333 3 3 33 3 77 33 333 7 7 3 3 7 3 000000000000000000000000 777777777777777777 00 7 77 3 3333333333333 7 77777777777777 3 3 0 7 3 3 33 7 333 3 77777 77 0000 7 3 777 7 7 3 3 3 0 7 0 3 000 33 7 3 7777 33 0 33 00 5 8 88 0 0 0 888 0 0 55 2 222222222222 2 88 5 8 0 0 0 0 0 7 3 3 7 7 33 7 3 7777777 0 3 3 3 3333 7 7 3 3 7 3 0 333 3333 3 7 77777777 7 7 3 3 3 000 0 3 3 3 7 0 7 77 7 7 0000000000000 3 7 7 00 0 7 7 777 0 3 7 3 00 7 33 3333333333333 33 7 7 00 7 7777777777777777777777777 00 333333 0 8 2 5 00 2 555 0 0 0 0 5 0 0 0 8 0 6 0 4 0000000 0 0 8 8 000000 000 2 8 4 4 0 8 6 444444444444444 0 0 0 88 00 444444 0 0 0 00 0 0 0 000000000000 0 00000 000 0 22222222 0 8 0 000 8 444 00000 00 00 00000 0 4444 4 0 0 0 22222 88 0 0 00000 888 0 000 2 0 555 55555 22 2 5 2 0 8 0 66666666666 444444 0 0000000 222222222 666 00 0 6666 8 4 6 0000 0 000000 333 777 7 0 33333333 2 0 0 222 7 7 4 666666666666 1111 7 4 7 66 99999999999999999999999 0 99 7 000 7 333333 7 7 7 777 7 222 22 777 7 0 777 333333333 7 7 777 22 7 7 7 7 2 7 7 7 2222 22 7 777 8888888888888888888888 7 7 7777777 222222 777 5 0 00000
consensus : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC-AN-CGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGAT-CTACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT-AGGGGTT-GTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-T-GCA-CCTGA-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCGGN-CTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACGC-AAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAACGAAGGGCTGTGGCCGACCCCATTCGC-CAGTA-CAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGCGA-C-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGT-CTATCTGCATTGTCTGATGGTG------TCTGCG----------AGTGATCTC-CTCACATACTTAG-CTGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGA-CCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCATCCG-GGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT-A----G-GGCAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
Reference ( family-3946 ) : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTCCAN-CGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGAATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGAT-TTACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT-AGGGGT--GTGGTAGTT-----GGTGGCAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGGGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG-------------GTGTTCTTTC-AGGCAAGGATAGGTTAATNGTGTACCTC-GATGCTC-TG--GAGGTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGATTAT--TAGATTAGA-TACCAG-T-GCAACCTGA-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCGATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCGCG-CTCG--GACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGGGAGACTGCAAACA----ACATANGTCATTA-TGATCAG-ACGC-AAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAG-C-TGGA-AACAAGGGAGATCG-GG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAACGAAGGGCTGTGGCCGACCCCATTCGC-CAGTA-CAA---GCTGAAGGCGTTCAGCACTTCCACTCCAGGGTTCCAGAGAAAAGGTCAGCGA-T-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCAACGAAAATCAGGCGTGTTCTATCTGCATTGTCTGATGGTG------TCTACG----------AGTGATCTC-CTCACATACTTAGCCTGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGA-C-TGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATG-ACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCATCTA-GGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGTGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT-A----G-GGCAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
gi|1 : CATTACACC--CATCAAGGGTGTTTTTTTTCGTCCTA-AGATGGCCTGATTAACACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTTCAATCGCTTCGGCAG-CGACTAAGATGA-GTTCATTTCCAATTTTCACAATA-AGG--AT--CGAT------TGT-----CTG--ATTAAATATATTACTGCA--CGGAAGGAAGGGTTTGTA--ACGGTT-TCTTAAACCAGCGACAAAA--TAGATGAATGCCTTGCAG-TTCTTG--C-GAACACCTCTGTCGAATTTGAGAA-TAGA--CTCAAAAAACAAAACATCACCCGATTTACGTCGAGATCTTACGATC-A--AAG-GCT-T---ATCTTATG-TAGCTAT------TAACTTGATTCTGGTGGTG-GTGGTA-GT-AGGGGTT-GTGGTAAT-------------AACTGAGATGTTAACATTGCATCA-TGAG-ATGGTGGCAC-TGTGGA-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACTTGTGAAAGCCGATA-TTG--CAAAAGCAGGGGCA-GCAGACTCCTTCCTGAGGGCATCTCGTGT-CTTGCGCACAAGAAGAGCAAA--TC---AAGTGACTGTAGCAGCATTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCA---CT-----------------AATGTCTGAA------AGAAA-------CCAGGAATG-CAGAGGA---CATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATCG-TTAATTATGTACCTC-GATGCTC-TG--ACGATGCT---GGTTCCAC--GT-GCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-T-GCA-CCTGAAGGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAAT-TAAGATAAGGCTACTTCA--CCATCAGAAAAC---ACAGAG--GGTGTTCTCTTCAATCCCAATTGACCAGGCACA--AGCAG-AA-CAATAGCTGCATCAAA-GGAGA-CGG-TGGAGCAGTTGGG-CTCACTGACAATCCTA--GTGCCTTACGTCGCAGG-AAGGTTCT-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCT-TCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TACGTCATTA-TGATCAG-ACGCCAAGTGT-AT-AGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCATAGAGGAGATGGGC-AACCCGTTCGAGGAGGGGAATCAGGAT---GTAGCCAAA-C-TGGA-AACAAGGGAGATCGCAG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-ATCATGGCCAAGAGCAGTTCAAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAACAAAGG-CTGTGGTCGACCCCATTCCT-C-GTAACAA---GCTGAAGGTGTTCAGCACTTCCACTCCAAGGTTCCAGAACAAAGGTCAGCAAAT-GCTCGTCTCCGTCAAGAACGAC-CGTGAACTCTTCGCACGCAT-GTACACTG-TCTGCCAGACGAGAGA--TGGAA------AC-----CTTTCGTCA-TGAAAATCAGGCATGT-CTATCTGCATTGTCTGATGGTA------TC---G----------AGTGATCTC-CTCACATGCTTAGCTTGGAA-GTTTCCGACGCAAGTACAGAAACTCCTGTCACGA-CCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTAGATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-GTACACTTGCAAAGCAGAGACAAGGCTTGCGAAGATTTTTGGTGGCTGCCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAGCT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAG--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATAG-TTT-----CA---CC-AGGA-G-----GACAA-ACAACT-TG---TCATTACTGACGA-CGA-----AGG--AGTGCTC--AGCAAGCCACTACTGCCAGGCCAGATCTGACT--C-CACTCG-TCCC-ATTT-AA-CCGACTAAAGAAGCTGAAGCATTCAGAT-A---TGCTGTCAAT-GCAATCTTCAAACAG---CCCAGAACAGACACCATGC-AAATA-TCA-CTACGGGCTATAGACACATCGATC--CGATGT-TAAG-G-CTGG--C----AGTC---GTG--CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTC---GCATGGG--ATT---CCGA-ACAGTC-C-GAGT-TTTTCGATAACTAGGGGCAG--ATTG-AATAGCAACTGGATGGGAACAA-GAGAAGGCTCATGCCAT------TG----CAATGTTTA-CACACTCTCA-CGTGAA-TATC-GACACTGTGTCTAGTTTTTCC-ACTGT--CGTAGT---TTTGCTAGACG--TGGCCAGAAGAACTG---CGC-A----GTGGCAGT-CT-GA---C-GGTACTGTC-CAG--AATT---CACAGTCTAAGC---------GCT-GCTGCTGC-TGTCCT---CTGC--ACC-GC-ATG-AT-A-AT-CAGAACGACGCAATG----CGCA--TCA-T---CGAAAGG------GTG--CCGTTTG----ATCGAACT-AGGCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAAATCTTCCGCAATTAAAGAAAGAACAAT
gi|12 : aGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAa
gi|14 : A-AATAGCAGCTGGATTGGGATGA-GAGATGACTCATG-CAC------TA---CCAATGTTC--CACGCTCTCT-C-TGGA-GGT--GACACTGTGTCTAG--------------------T---TTTGCTTCACG--TGGCAAGAAG-ACTG---CAT------G-GGTAAT-CTAAA---C-
gi|16 : GCAGCTGGATTGGGATGA-GAGAAGGCTCATA-CAC------TA---CCAATGCGC--CACACTCTCT-C-TGGA-TGT--GACACTGTGCCTAGTTTT----ACT-T--C----------------ATG--TGGCAAGAAG-ACTG---CAT------G-GGCAAT-CT
gi|18 : ATTGAACAGG---A--ATCGGTGA-TAATGGCTGCATCAAA-GGAAA-CGA-TGGAGCAGTCGGT-CTCGCTGACAAACCTA--GTGCCTGACGTCGCTGG-ATGGTTGC-TGGACaaa
gi|2 : CATTAAACGAGCATCA-GAGTGTTTTT---CGGTCTACAGATG---TGATTA-CACAGCGGTCCAAACGGGACATTCTGGGGTGTTAGTGGGTGCGAGATTCCGACCGGGGTTGTTGATTTTC-AT-TGGATTGGCAGTCGGACAAGATGAAGTTCATTTC-AATTT-CACAATAGAGGGAATAACGATGTTAAATGTAGTAGTTGTAATGATATAAATTACTGCAGTCGGAAGGA--GGTCTGTACGAGGGTTATATTTAAACAG-GGCAAAA--AG--TGAATGG-TTGAAG-TTAT-GTGCAGAACAC-TCTGTCGAAATT-AGAAGTAGAGGCT-GAAAAACAAA-CATC--CCGATTTACGTCGAGAT-TTACGATTTA--AAGAGCT-TGAGATTTTATGGTAGGTGTGAATGTTGAATTGAT-ATGG--GTGAGTGGTGAGTGAAGGGTTTGTGGTA--T-----AGTG-TAGACTGAG--TTTAACATTGT--CAATGAGGATGGTGG-ACGTGTGGGAT---GCTGTCAAG-AGGGTGTGCTTTGAGTGAAAGCA-GTGTGA--GCCGATAATTGGAC-AAAGCAGGGGCAAGCAGACTCCT-CTTG--AGCATCTCGTGGATTTGCGCACATAGAGAGAAAAATTCGGAAAGTGACTGTAATGGCATTGTACATGCTTGCAAGCAC-GTGACCTACAGT--ATA---------------------TGTCTGAA------AGAAC-------ACAGGAATGACAGGAGA-ATCATCCTGAGTTTGAAGACT-------------GGAA-TAGAACTGTTGG--------------TGTACTTGCTAGGCAAGGATAGGTTAATAGT-CACGTCAGATGCTTGTGAAGAGTTGGCTGGGGTTCCACTG---CAACGGACTGGATCACATGTAGAGTA-----GATTAGAGTATCAGATAGAAACCTGA-GGACATGGTGGTAACTGAGCC--CAAACACC-AGATGTATC-AGGAAATATAAGATAAAG--GCTTAATCCCATCAGAAA-C----CAGAG--GGTGATTTCTTAAATCC-AATTGAGGAGGCA-A--GCTAG-AACTAATGG----ATCAAAAGGAGAGCGGGTGGAGCGGTTGTAACTTG--AACAATCCTAAGGTGC-TTACGT-GCAGGGAAGGTTTCTGGGAC-AGAAGTGTGTCATGCAGGGTACTCGAA-AATCTTTCAGGTTGGAAAC-AACAATGGGAGAATGCAAACA-------TTAGTCCATACTGATCAGTACGC-AAGTGTGATTAGGATACATTTACGAAAGAAGTTTGCT-TGTCG-CGA-GTTGTATAGGGGATGGGCCAACCGGATCGAGAGAAGGAATCAGGATTGAATAGCCAAGACGTGGAGAACAAGGGAGATCG-AGTGATTCTGCTGACGTTATGA-TGTCGAAGAGGTAT--TGGCCAAGAGCAGTTC-AGGCTTTCCACCCAGAGAATGTCTGT-GGCCAGAAAGAAAGGCTGTGG---ACCC-ATTAGCTCAGT--CAAAACGC-GAAGGTGTTCAAAA-TTACACTCC-TGGTTACAGA-AAAAGGT-AGCAA-T-GATAGTATCCGTCAGAGACGATACGTGAACTCTTCGCACG-ATAGTACACTGGTCTGCCA-ACGAGAGAGGTGGAA------ACG----CTTTCGTCAATGAAAATCAGGCATGT-CTATC-G-ATTGTCTGATG-----------TATG----------AGTGATCTCGCTCACATACTTAG--TGGAA-GTTCTCGACG-AACGTTAGAAACTCATGTC--GA---TGTA-TT-TGCTATGGATGGAG-AGC-ATCGTCCAGTTGCTGAAGCCGG-TGTGATGTAAAAACTGT-GAAGAGTAAG-GAAAACATGGTCAT-ACTGAATATA-------TGTGCCACGAAGCTGCAAA-AGTGAC-TACATGA-TCGGGTCTGGATAGTTAGTAGTTACTTTGCTGATTCACTGAAATGCAGT---ACACTTGCAAAGCAGAGACAAGGCTTGCGGAGATTTTTGGTGGCTACCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAACT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAA--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGAAATAT-TTT-----GA---CC-AGGAGG------ACAA-ACAACT-TG---TCATTACGGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATAT-TA-CCA--TAAAGAAGCTGA--CATTCAGATAT---TGCTG--CAT-GC--ATCTCAAACAG---CCCAGAACAGACACCATGC-AA-TATTCATCTG-GG-CTATAGACATGCA---C--CGATGT-TAA--G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAA-CCAGAAA-GAC----AAACTG---GC-TGGG--ATT---CGGA-ACAGTC-CCGAG--TTTTCGATAACTAGGGGCAG--ATGA-AATAGCAACTGGATTGGGACAA-GAGAAGGATCATG-CAT------TG---CCAATGTTATACACACTCTCA-C-TGAA-TAC--GACACTGTGTCTAGTTTT--CCACTGTGTC----TAGTTTTGCTAGACG--TGGCAAGAAG-ACTG---CGC-A----G-GGCAGT-CTGGA---C-GGTACTG-C-CAG--AATT---CACAG---AAGC---------GTT-GCTGCTGC-AGTCCT---CTGC--ACC-GC-ATG-AC-ATAA-CAG-ACGACGCAATG----CGCA--TCA-T---CGAAAGG-T---T-CGAT-----TG----ATCGAACT-A-GCAA-------ATGCAC------A-----CA----CAAGGCCAGGAGGAAAATCTT-CG
gi|20 : G---TGAT---CACTGCG-TCCAA-CGGAACACTT-GGGGTATTAGTGA-TGCA----CC-GACCGGG-ATGTTGAATTGC-AC-CGCTTCAGCAG-CGGACAAGAT
gi|21 : tgTCCTAAACGAACGGCAAAAGAAGAATGTATGCCTTACAGTTTCT-G--CA-AACACC-CCGCC-AGTTTGA
gi|3 : ttATG-TAGCTAT------TGGCTTGATTTTGGTGGTGA-TGGTG-GT-AGCGGTA-GTGATAGTTTTAATGGTGACA-ACAGAAATTTTAACATTGTATTA-TGAT-ATAGTGGCAC-TGGGGGTAAGGGATG-CAAGTAG--TG-G--TTGGATG----CACGC-TGA--G------ATTA--CGACTGCATGGACA-GCAGACTCGTTCTTGCGAGCATCCCTTGT-CTTGCACACGCGAAGAACACA--TC---CAGTGACTGCAGCAGCGCTCTAAAT-CCTGCAA-CACCGTG-CCTACAAACAATACTGTCTGGGAGAAACGAGGAATGTTTGAATTTTGAAGACTGGTGTTGCCAGAAAGGA--GAGGATATCCGCC--AGTTTCATTACTAGGCAACCGTGCGGGAACAAAAACTGTTGGCTCAAATGTATGTGTGTTCGCTC-AATTAGGAGTAG-TTAATGGTGTTCCTT-GTTGCTC-TG--GAGGTGCC---GGT-CCACTGGTTCCACGCACTGGATCACATCCA--TTATGCTAGGT-GGA-TACTAG-T-GCA-TCAGACGGACATGGCCA-ACCTC-TCCACCAAACACCTAGATATATCCAGGAAAAGAAAGG-AAGGCCACTTCA--CCGTTAAAAAACCCCACAGAGATGGTGTTTTCTTTAATCCCGATTGACAAGACACATGAACAG-AA-TAATGACGACATCAAG-GGAGA-CG--------------------------ACCCTA--GTGCCCTACGTGGTCGG-ATAATTGC-GGGACCAGAAAT-TGCTA----GAGTAATCGAAGAAT-TC-CAAGATGAGAACCAACACTAG-AGACGGCAAACAGCAGACATAGGTCATTA-TGATCAG-AAAC-AAGTGTA--CAGGCCTCATTTGTGAAAGATGTATGCTCTCTCGTCGGTATCATAGAGAATATTGGA-AACTCACTCAAGGAGGTGAGTCAAGAT---GTAGTAAAC-C-TGGA-CACAAAG---------------CTG-TGA-----TGAATGCC-AAGAGA-AT-A-GGATAAGAGCAGTTCGAGGATCTC-AAC-AGAGAGTGTCTGTTGGACAGAACAAGGAAAT-TGGCTGACCCCATTCAC-CAAGA-CAG---GCTGATGGCATTCAGCCCTTCCACTCCAGGGAGCAAGAGAAAAGGTCAGTGA-CAGGTCACCGCCGTCAAAAATAAT-TTTGATCTCTTTGTACGCAT-GTACATTGG-CTGCAAGATGAGATA--TGAAATTCTTGACGAGTTCTTCCGTCA-CGAGAATCAGGCGTGTTCTCT-TGCATTGTGTTATGGTGGAAGCCTCTGCACTGATACCAAAGTGATCTC----ACATAC-----CTGGAATATGTATAACGCAAAAACAGAGACTTCTGTCACAA-CCTGTA-TTGTGCT-TG-ATGGATCAGCCATTGTCCAGATGCTAAAGATAACTGC-AT-TAAAGGCCTTTGAAGAGTATGCACAA-CA-GATCGTCACCCCGTATACCAGGTATAT-GCGCGAAGCTGTAAACAGTATCACTCCTGAATCTGGTCTGGA------ATACTTACCTCGCTGATTTACTGAAATGCAGT---ACATATGCAAAGCGGAG--------TGCGAAGATGTGTGATGGCTGCTGC-------------------------AGGAAACTGACATAACT-TCCTAAGAATG-GACGGCTT--AAAAAC--AG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CTAATTGCCAGTTATCAGGGAATGA-TTT-----GA---CT-AGGA---------CAA-GCAACT-CG---CGATTGCTGATGG-AGA-----GGC--AGTTCTC--AGCAAACAACTACT-----GCCAGATCTTACC--T-TATTCGCCCCC-ATGT-AA-TCA--TAAAAAAGCTGA--CAGTCAAATGC---TGCTG--AAT-GT--TTCTCACGCAG---CCCAACATTCACACCGTTC--AATACTCATCTA--GACTCTAGACA-------C--TAATGT-T-GT-G-CTGG--A----AGT----AT---CCCTA--GCA--CA-GGA--TATGC-AACCAGAAGAAAA----AATATG---AC-TGGC--ATT---CGGA-ACAGT--T-AAGAGTTTCCAATACCTAATAGCAC--ATGA-AATAGCACCT
gi|4 : aGAA-GTCTCCGACGCAAAGACAGAGAATCCTTTCACGAAC-TGTAATT-TGCT-TG-ATGGAGCAGCCATTGTCCAGGTGCTGAAGCCAGCTTC-AT-CAAAGACCTTTGAAGAGTATTCACAA-CA-GGTCGTCATTCCATATA-------TGT-CCACGAAACTGCGAATAGTGACACACCTAGATCTGATCTGGG------ATACTTACCTTCCTGATTCACTGAAAGGTAGTAG-ACAGTCACAGAG--GGGACAAGGCGTGCTGAGACGTGTGGTGGCTGCCGCTGCCAAACCA----------------GGAAACTGGCAGACCT-TGCTACCGATGTGACAGCAA--CAAGACTGAAACCTGGTTCAGG-TT-CCCTT-CT-CAGCAG-CT------------TCATGGAATGGCTTT-----GA---CCCAGGGGA-----GACAA-ACA-CT-CG---TCATTTCTTATG---GA-----ATGCCAGTGCTCCCAGCAAGCCACAACT-----GCCAGAT-TGACT--TACAATTG-TCC--ATGT-AAACCCACCGAAAAAGCTGA--CAATTGGATGGGGTTGCTG--CATTGC--CTATTACACAAGTTCCCAG--TGTACACCATGCCAAATACTTATCCG-GGACCTTGGACAC------C---GATGTCTGGCTG-CTGG--CCCCCAGT----GT---CCCTT--GCATCCA-GGA--GTTGCAA-TCATGTAAGAC----AACCTG----TGTTACTAATT---TGGA-ACAGGC-T-AGAA-TTTCAGATACCTAGCAGCAA--ATGA-AATAGCAGCTGGATTTGGACGA-TAGAAGGCTCATG-CAC------TA---CCAATGTTT--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAATT------A-----------------TGCGAGAAG--TGGCAAGAAG-ACTA---CAT------G-GACAAA-CTGGA---C-GGTACTG-C-AAT--AACT---CACTG---AGGCGCTGCTGCTGCT-GCTGCTGC-TGTCAT---TTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGATGCAATG----TGCA--TCA-T---CGAGAGG-TC--CGTGATCCTTTTATATGATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATATT-CGC-----AAGGAAGAACAATt
gi|4 : tgcttggaaTTGAAAT-CTAC-ATTTGCTGATATCTCTG-GATATAATG-TAGCTAT------TGACTTGATTCTGGTgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagataccagaatcaagtcaatagctacattatatccagagatatcagcaaatgtagatttcaagtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : tgcttggaagaagtctccgacgcaaagacagagaatcctttcacgaactgtaatttgcttgatggagcagccattgtccaggtgctgaagccagcttcatcaaagacctttgaagagtattcacaacaggtcgtcattccatatatgtccacgaaactgcgaatagtgacacacctagatctgatctgggatacttaccttcctgattcactgaaaggtagtagacagtcacagaggggacaaggcgtgctgagacgtgtggtggctgccgctgccaaaccaggaaactggcagaccttgctaccgatgtgacagcaacaagactgaaacctggttcaggttcccttctcagcagcttcatggaatggctttgacccaggggagacaaacactcgtcatttcttatggaatgccagtgctcccagcaagccacaactgccagattgacttacaattgtccatgtaaacccaccgaaaaagctgacaattggatggggttgctgcattgcctattacacaagttcccagtgtacaccatgccaaatacttatccgggaccttggacaccgatgtctggctgctggcccccagtgtcccttgcatccaggagttgcaatcatgtaagacaacctgtgttactaatttggaacaggctagaatttcagatacctagcagcaaatgaaatagcagctggatttggacgatagaaggctcatgcactaccaatgtttcacgctctcactggatgtgacactgcgtctaattatgcgagaagtggcaagaagactacatggacaaactggacggtactgcaataactcactgaggcgctgctgctgctgctgctgctgtcatttgcaccgcgtgacataccagacgatgcaatgtgcatcatcgagaggtccgtgatccttttatatgatcgaaccagcaaatgcacagacattgacaaggccaggaggaaaatattcgcaaggaagaacaatgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagatAG--AACT---CACCG---AGGC---------GCT-GCTGCTGC-TGTCAT---TTGC--ACC-CT-GCG-AC-ATAC-CAG-ACAATGCAATG----CGCA--TCA-T---TCAGAG-----------------------ATCGAAAC-A-GCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAGAgtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : TTGAAAT-CTAC-ATTT-------GCT----GAT---ATG-TAGCTAT------TGACTTGATTCTGGTacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacataccagaatcaagtcaatagctacatatcagcaaatgtagatttcaagt
gi|6 : agaactcaccgaggcgctgctgctgctgtcatttgcaccctgcgacataccagacaatgcaatgcgcatcattcagagatcgaaacagcaaatgcacagacattaacaaggccaggaggaagaacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacatCCA-GGACTGTAGACAC------CAATGCTGT-AGGT-GACTGGTGC----AGTTCGTGTTCGCCATGCATCA--TATGGAGTATTGCAA-CGAGAAA-GACTAGAGAACTGTGAGTATGGACTATTGCATGAAGACAGACGC-CAGA-ATTCT-ATAACTGGTAGCAGCCATGAGAATAGCAGCTGGATTGGGACGACAAGAAGGG-CATGGTACAGCGGATAGACTCAAAGT-C--AATGTCTTCAACGTGGAATGTCCACCACT-CGT-TAGTCAA--C-A-TGT--A----T---ATTGCTAGGAGAGTGGCAG--AC-ATTATCTCATTA----C-GACAATGCTAGAAGACAGGTACTG-TACAATTAACTTCGCGTGA---AGGCA--------GCTAGCTGC-GCATGTCATGACTTGCCAGCCAGCAGTGGACTAGACACAG-ACGATGCA-TGAGCACGCAATTCAGTGGGCGAGAGG-TGGTCGTGATCCTTTTGTAT-ATCGAACCGA-GCAAGAATAAGATGTAC------AGAGATCATTGACG----CAGGGAGAAAATCTTGGGC-----AAGGAAGAgt
gi|7 : cagcattaggcaTGGC--ATT---TGGA-GCAGGC-C-AGAA-TTTCCTATACCTAGCAGCAC--ATGA-AATAGCAGCTGGNNNNNNNNNN-NNNNNNNNNNNNN-NNN------NN---NNNNNNNNN--NNNNNNNNNN-N-NNNN-NNN--NNNNNNNNNNNNNNNNNN--N-NNNNN--N----N---NNNNNNNNNNN--NNNNNNNNNN-NNNN---NNN-NNNNGG-GACAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCTG---AGGC---------ACT-GCTGCTGC-TGTCAT---CTGC--ACC-AC-GTG-AC-ATAC-CAG-ACGATGCAATG----CGCA--TCA-T---CGAGAGGTT---CGTGATCCTTTTGTATAATCGAACC-A-GCAA-------ATACATGTACAGAGA---CATTGACAAG----GGAAGAAAATCTT-CGC-----AAGGAAGAACAATcgaatgagtgcatcgctcatccctccaaacgaaggcagcgtcgttggcggaacatgtaaagagcggcaggtgtatcaagaaatggtgtgtgagcagatactgggatcccaacacacaaatcgtccgccaacaaccaactggggttggtcaaggacgtgaaggacagtacacaccttactggaccgctaccctgattgcagctcacagcgatatgagcatggttttcatgtgcaaaagcagaacagggtagtgggacg
gi|9 : tggtCACAAGGCAGTGACGAGAC--ACGTCGATGTAT-----CTGCCGATGCCACAC--AGTAAAACC--T-GCAGAGAGCTCTCCGACGTATTCGACGAACG-GAT-GCCAAACAAGATAG-G--CTG-TTCAGGATTGCC--TGCTGCAGCAGGCT------C-----TCATGGAATGG-TTTTGTTTGAACACT-ATAAGGCGATAGACGAGACAACTTCGATACCAATACTGA-GATAGATAATGAGG--AATGCTC--AGCAAGACA-TCCT-----GCCAGATCT-ACTTAC-AATTCG-CCCCAACGTGAG-AGGACGACAGAAGCTGgagcagctcatccctccaacgaaggcagctctggaggaacatgtaaagagggcagtgtatcaaggaaatgtgtgtagtcagatactgctaccaacaccaaatcgtcctccaccaaccaactggggttggtcaag
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CCATTTTAGAAGAATGTCAGTGTAATCTAGCTTCAGATGCTAGACCATATAGCATGTCAGTATTATACCTAAGACATTTACAGGACTAATTAAGCCATTCATTTTAAAGTATTGTGTTGAATCCAATTTTTGCCTAGATAATTTCCAAATACAATCACGTGACATACTGTGGTAGATAATATCAAGTTGAAATTGGTACCATTGGATTTCTTGCGCCCACCCCAACATATACATATTTAGATATTAAAATCAAGTCAATAGCAGCATTGTGTCAAGAGATAATAGCATTTGGATTTCAAGTTGCGGCCATTTTGAAATCCAATATGGCGGACTTACAGAGAGAATTTCAAGTGGCCCAATAACTGAAAATGTTCGTAACATATTAATGAATATTTGTGCCAAATTTGGTGCTTGCATACCGAATTGTACACTTCTTACAAATACCGGTATTTGGGCTAAGCCGCCCGACTAAAA
Unaligned ( gi|10 ): TGCGCTACAATGCCCCAATAAAGATACATTTAGATTCCGGAATAACTGCAATATATCCACAGATAATAGCAAATGTATATTTCAAGTAGCGGCCATTTTGAAATCCAATATGGTGGGCACTTAAAAAGAATTTCAAGAGGCGCAATATCTGAAAATGTTTGCAACATGTTAGTGTACATTTGTGCAAAATGTGGTGCTTGTATCACAAAATGCACAACAGGTTTGCTATGCTGCTCCGCTATTATAAC
Unaligned ( gi|11 ): TTGACAATACCAAGTGGTAATTGATAAAATTGGATTCTTGAACCCCTGAATCGAGTCAATATATGCATTATGCACACAGATGATAGCAAATGTAGATTTCATGTGGTTGCTATTATGAAATCCAATACAGTGGACATGTAGAATTTCAAGTGGCCCAATATTTGAAAATGTATATAATATT
Unaligned ( gi|13 ): GGCCCAATATCTGAAACATGATCGCATATTAATATACTCATTTGTACATATATTGGTGGCTGGCTAGTAGTTCACAGAAGTCATGCGCAATAGTTTGCTTATTGTCTGTTTTCGCTACTTAGTTAGAAT
Unaligned ( gi|15 ): TGGTTTCTTGCAAGAGCAAGAAAGGGTGTGAGGAGCTGCAAGTGCAAAAAGGCTGCCCTTCAATGCACAGCCCTCTGTGAATGTGAAGGGAACCGCACATGTTGATGAGCCAAGAACA
Unaligned ( gi|17 ): GCCATTTTGAAATCCAATATTGCGGACACATAGGGAAAATTTCAAGTGGCTCAATATCTGAAAAACATGTTAAAGTACATTTGTACCAAATTTGGTGCTTGTAT
Unaligned ( gi|19 ): AAAATGATCGTTTTCAACAGTATAGAGGTACATTTGTACCAAATTTGGGTGCTTGTATCACAAAATAGCGCATAATTTGCTAATGCTGTTTGCTATAT
Unaligned ( gi|22 ): CCTGTATCACAAATGCATAATTCTTTAGATTATTTGAGCTAACCCGCCCGC
Alignments
lowQualScore : 111111111111111111111111 111111111111111111111111
lowQualScore : 111 1 222 1 222 111 1 1 1 2222 1 11 1 1 1 1 1 11 11 333333 22222 11 11 11 11 1 22222 1 2222222 11 1 11 1 1 11 1 1 444444444444444 111 222222 11 1 11 7777777777777777 1 1 1 55555 1 1 2222 1111 11 2222 1 33 1 11 222 1 1 1 111111111111111111111111 555555555555555555 11 22 7777777777777 77777777777777 1 1 1 1 11 222 22222 222222222 1 1 1 11 111 1 1 1 1 111 11 3333 11 11 1 1 1 1 11 222222222222 11 1 1 1 11 1 4444444 1 1 1 3333 1 222 1111 1 33333333 1 1 222 1 1 1 1 11 222222222222222 1 11111 1 1 11 5555555555555 11 22 111111111111111111111111 1111 222222 1 1 1 1 1 1 2222222 1 222222 333 1 555555555555555 11 111111 11 444444444444 222222222222222222222222 111 111 22222 11 11 22222 1111 11111 11 22222 111 1 111 111 11 1 1 44444444444 222222 2222222 333333333 111 11 1111 2 1 1111 333333 111 111 11111111 111 1 111111111111 1111 1 11 77777777777777777777777 111 333333 111 111 111 333333333 111 1111 111 4444444444444444444444 2222222 111111 111 1 22222
lowQualScore : 1 999 5 111 1 5 333 999 3 3 3 7 3 8888 6 3 88 1 3 5 5 5 5 88 88 000000 66666 88 1 1 1 88 88 77 1 5 6 55555 6 3 5555555 44 0 6 6 5 77 5 5 88 0 5 222222222222222 111 8 333333 0 0 44 3 88 9999999999999999 7 7 3 3 6 3 11111 3 3 6 1111 7 2222 88 7777777 0000 3 7 33 3 11 88 333 0 0 3 3 6 3 000000000000000000000000 333333333333333333 44 00 7 3333333333333 6 88888888888888 3 3 1 6 3 3 88 1 333 7 44444 777777777 3 3 3 88 777 3 3 7 2 6 2 7 111 88 0 7 0000 88 1 6 22 2 8 33 1 0 0 555 0 0 66 4 111111111111 1 33 2 8 1 0 1 1 0 6 3 7 6 6 99 6 3 3333333 1 3 3 3 0000 0 6 7 7 0 3 1 333 7777 3 6 00000000 6 6 7 3 3 888 2 3 3 7 2 0 6 55 6 555555555555555 7 0 6 88 2 6 99999 1 3 6 3 6 7 6 88 4444444444444 44 0 6 00 6 888888888888888888888888 7777 333333 0 0 0 2 11 3 8 0 0 0 0 2 1 8 8 0 5 0 0 8 1 6666666 8 6 0 0 333333 555 0 0 0 1 1 3 0 666666666666666 1 8 8 44 11 111111 8 8 8 11 8 8 8 333333333333 8 555555555555555555555555 8 0 8 444 3 222 00000 11 11 00000 5 5555 1 8 8 8 33333 33 1 2 55555 444 0 555 0 1 777 99999 33 3 6 0 3 0 1 77777777777 666666 8 3333333 111111111 111 11 8 1111 0 0 0 7777 1 000000 999 111 6 1 22222222 5 1 1 000 5 5 1 666666666666 6666 5 1 5 33 0 66666666666666666666666 1 77 5 000 0 111111 5 5 3 111 6 999 99 111 0 1 111 333333333 6 6 111 99 6 6 6 6 3 6 6 0 4444 99 6 111 9999999999999999999999 6 6 1111111 999999 111 2 6 55555
lowQualScore : . ... . ... . . ... ... . . . . . .... . . .. . . . . . . .. .. ...... ..... .. . . . .. .. .. . . . ..... . . ....... .. . . . . .. . . .. . . ............... ... . ...... . . .. . .. ................ . . . . . . ..... . . . .... . .... .. ....... .... . . .. . .. .. ... . . . . . . ........................ .................. .. .. . ............. . .............. . . . . . . .. . ... . ..... ......... . . . .. ... . . . . . . . ... .. . . .... .. . . .. . . .. . . . ... . . .. . ............ . .. . . . . . . . . . . . . .. . . ....... . . . . .... . . . . . . . ... .... . . ........ . . . . . ... . . . . . . . .. . ............... . . . .. . . ..... . . . . . . . .. ............. .. . . .. . ........................ .... ...... . . . . .. . . . . . . . . . . . . . . . . ....... . . . . ...... ... . . . . . . . ............... . . . .. .. ...... . . . .. . . . ............ . ........................ . . . ... . ... ..... .. .. ..... . .... . . . . ..... .. . . ..... ... . ... . . ... ..... .. . . . . . . ........... ...... . ....... ......... ... .. . .... . . . .... . ...... ... ... . . ........ . . . ... . . . ............ .... . . . .. . ....................... . .. . ... . ...... . . . ... . ... .. ... . . ... ......... . . ... .. . . . . . . . . .... .. . ... ...................... . . ....... ...... ... . . .....
lowQualScore : 0 000 5 555 0 0 333 777 7 3 3 3 3 3333 7 3 33 0 3 5 0 5 0 00 55 000000 55555 55 0 0 0 00 00 55 0 5 7 33333 7 3 7777777 00 7 7 7 0 55 0 5 00 0 0 888888888888888 222 0 000000 8 8 00 3 33 0000000000000000 3 3 3 3 7 3 77777 3 3 7 7777 3 3333 33 7777777 3333 3 3 33 3 77 33 333 7 7 3 3 7 3 000000000000000000000000 777777777777777777 00 77 3 3333333333333 7 33333333333333 3 3 0 7 3 3 33 0 333 3 77777 000000000 3 3 3 33 777 3 3 3 0 7 0 3 000 33 7 3 7777 33 0 7 00 5 8 88 0 0 0 888 0 0 55 2 000000000000 2 88 5 8 0 0 0 0 0 7 3 3 7 7 33 7 3 3333333 0 3 3 3 3333 7 7 3 3 7 3 0 333 7777 3 7 77777777 7 7 3 3 3 000 0 3 3 3 0 7 7 77 7 000000000000000 3 7 7 33 0 7 00000 0 3 7 3 7 3 7 33 3333333333333 00 7 7 77 7 000000000000000000000000 3333 777777 0 8 2 5 00 2 8 0 0 0 0 5 0 0 0 8 0 8 8 0 4 0000000 0 0 8 8 000000 000 2 8 4 4 0 8 6 444444444444444 0 0 0 88 00 444444 0 0 0 00 0 0 0 000000000000 0 666666666666666666666666 0 8 0 000 8 444 00000 00 00 00000 0 4444 4 0 0 0 22222 88 0 0 00000 888 0 000 2 0 555 55555 22 2 5 0 2 6 0 66666666666 444444 0 0000000 222222222 666 00 0 6666 8 4 6 0000 0 000000 333 777 7 0 33333333 2 0 0 222 7 7 4 666666666666 1111 7 4 7 66 7 99999999999999999999999 0 99 7 000 7 333333 7 7 7 777 7 222 22 777 7 0 777 333333333 7 7 777 22 7 7 7 7 2 7 7 7 2222 22 7 777 8888888888888888888888 7 7 7777777 222222 777 5 0 00000
consensus : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ATCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTG-A-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACG-CAAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAACGAAAGGCTGTGGCCGACCCCATTCGC-CAGT-ACAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGC-GAC-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGTCTATC-TGCATTGTCTGATGGTG------T-TGC----------GAGTGATCTC-CTCACATACTTAGC-TGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATA-------TATGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT-A----G-GGCAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
Reference ( family-3946 ) : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ANCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTG-A-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACG-CAAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAACGAAGGGCTGTGGCCGACCCCATTCGC-CAGT-ACAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGC-GAC-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGTCTATC-TGCATTGTCTGATGGTG------TCTGC----------GAGTGATCTC-CTCACATACTTAGC-TGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATA-------TATGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT-A----G-GGCAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
gi|1 : CATTACACC--CATCAAGGGTGTTTTTTTTCGTCCTA-AGATGGCCTGATTAACACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTTCAATCGCTTCGGCAG-CGACTAAGATGA-GTTCATTTCCAATTTTCACAATA-AGG--AT--CGAT------TGT-----CTG--ATTAAATATATTACTGCA--CGGAAGGAAGGGTTTGTA--ACGGTT-TCTTAAACCAGCGACAAAA--TAGATGAATGCCTTGCAG-TTCTTG--C-GAACACCTCTGTCGAATTTGAGAA-TAGA--CTCAAAAAACAAAACATCACCCGATTTACGTCGAGATCTTACGATC-A--AAG-GCT-T---ATCTTATG-TAGCTAT------TAACTTGATTCTGGTGGTG-GTGGTA-GT--AGGGGTTGTGGTAAT-------------AACTGAGATGTTAACATTGCATCA-TGAG-ATGGTGGCAC-TGTGGA-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACTTGTGAAAGCCGATA-TTG--CAAAAGCAGGGGCA-GCAGACTCCTTCCTGAGGGCATCTCGTGT-CTTGCGCACAAGAAGAGCAAA--TC---AAGTGACTGTAGCAGCATTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCA---CT-----------------AATGTCTGAA------AGAAA-------CCAGGAATG-CAGAGGA---CATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATCG-TTAATTATGTACCTC-GATGCTC-TG--ACGATGCT---GGTTCCAC--GT-GCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTGAA-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAAT-TAAGATAAGGCTACTTCA--CCATCAGAAAAC---ACAGAG--GGTGTTCTCTTCAATCCCAATTGACCAGGCACA--AGCAG-AA-CAATAGCTGCATCAAA-GGAGA-CGG-TGGAGCAGTTG-GGCTCACTGACAATCCTA--GTGCCTTACGTCGCAGG-AAGGTTCT-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCT-TCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TACGTCATTA-TGATCAG-ACGCCAAGTGT-AT-AGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCATAGAGGAGATGGGC-AACCCGTTCGAGGAGGGGAATCAGGAT---GTAGCCAAA-C-TGGA-AACAAGGGAGATCGCAG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-ATCATGGCCAAGAGCAGTTCAAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC-AAAGGCTGTGGTCGACCCCATTC-C-TCGTAACAA---GCTGAAGGTGTTCAGCACTTCCACTCCAAGGTTCCAGAACAAAGGTCAGCAAAT-GCTCGTCTCCGTCAAGAACGAC-CGTGAACTCTTCGCACGCAT-GTACACT-GTCTGCCAGACGAGAGA--TGGAA------AC-----CTTTCGTCA-TGAAAATCAGGCATGTCTATC-TGCATTGTCTGATGGTA------T---C----------GAGTGATCTC-CTCACATGCTTAGCTTGGAA-GTTTCCGACGCAAGTACAGAAACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTAGA-------TATGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-GTACACTTGCAAAGCAGAGACAAGGCTTGCGAAGATTTTTGGTGGCTGCCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAGCT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAG--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGGAATAG-TTT-----CA---CC-AGGA-G-----GACAA-ACAACT-TG---TCATTACTGACGA-CGA-----AGG--AGTGCTC--AGCAAGCCACTACTGCCAGGCCAGATCTGACT--C-CACTCG-TCCC-ATTT-AA-CCGACTAAAGAAGCTGAAGCATTCAGAT-A---TGCTGTCAAT-GCAATCTTCAAACAG---CCCAGAACAGACACCATGC-AAATA-TCACTACGGG-CTATAGACACATCGATC--CGATGT-TAAG-G-CTGG--C----AGTC---GTG--CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTC---GCATGGG--ATT---CCGA-ACAGTC-C-GAGT-TTTTCGATAACTAGGGGCAG--ATTG-AATAGCAACTGGATGGGAACAA-GAGAAGGCTCATGCCAT------TG----CAATGTTTA-CACACTCTCA-CGTGAA-TATC-GACACTGTGTCTAGTTTTTCC-ACTGT--CGTAGT---TTTGCTAGACG--TGGCCAGAAGAACTG---CGC-A----GTGGCAGT-CT-GA---C-GGTACTGTC-CAG--AATT---CACAGTCTAAGC---------GCT-GCTGCTGC-TGTCCT---CTGC--ACC-GC-ATG-AT-A-AT-CAGAACGACGCAATG----CGCA--TCA-T---CGAAAGG------GTG--CCGTTTG----ATCGAACT-AGGCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAAATCTTCCGCAATTAAAGAAAGAACAAT
gi|12 : aGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTATA-------TATGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAa
gi|14 : A-AATAGCAGCTGGATTGGGATGA-GAGATGACTCATG-CAC------TA---CCAATGTTC--CACGCTCTCT-C-TGGA-GGT--GACACTGTGTCTAG--------------------T---TTTGCTTCACG--TGGCAAGAAG-ACTG---CAT------G-GGTAAT-CTAAA---C-
gi|16 : GCAGCTGGATTGGGATGA-GAGAAGGCTCATA-CAC------TA---CCAATGCGC--CACACTCTCT-C-TGGA-TGT--GACACTGTGCCTAGTTTT----ACT-T--C----------------ATG--TGGCAAGAAG-ACTG---CAT------G-GGCAAT-CT
gi|18 : ATTGAACAGG---A--ATCGGTGA-TAATGGCTGCATCAAA-GGAAA-CGA-TGGAGCAGTCG-GTCTCGCTGACAAACCTA--GTGCCTGACGTCGCTGG-ATGGTTGC-TGGACaaa
gi|2 : CATTAAACGAGCATCA-GAGTGTTTTT---CGGTCTACAGATG---TGATTA-CACAGCGGTCCAAACGGGACATTCTGGGGTGTTAGTGGGTGCGAGATTCCGACCGGGGTTGTTGATTTTC--ATTGGATTGGCAGTCGGACAAGATGAAGTTCATTTC-AATTT-CACAATAGAGGGAATAACGATGTTAAATGTAGTAGTTGTAATGATATAAATTACTGCAGTCGGAAGGA--GGTCTGTACGAGGGTTATATTTAAACAG-GGCAAAA--AG--TGAATGG-TTGAAG-TTAT-GTGCAGAACAC-TCTGTCGAAATT-AGAAGTAGAGGCT-GAAAAACAAA-CATC--CCGATTTACGTCGAGATTT-ACGATTTA--AAGAGCT-TGAGATTTTATGGTAGGTGTGAATGTTGAATTGAT-ATGG--GTGAGTGGTGAGTGAAGGGTTTGTGGTA--T-----AGTG-TAGACTGAG--TTTAACATTGT--CAATGAGGATGGTGG-ACGTGTGGGAT---GCTGTCAAG-AGGGTGTGCTTTGAGTGAAAGCA-GTGTGA--GCCGATAATTGGAC-AAAGCAGGGGCAAGCAGACTCCT-CTTG--AGCATCTCGTGGATTTGCGCACATAGAGAGAAAAATTCGGAAAGTGACTGTAATGGCATTGTACATGCTTGCAAGCAC-GTGACCTACAGT--ATA---------------------TGTCTGAA------AGAAC-------ACAGGAATGACAGGAGA-ATCATCCTGAGTTTGAAGACT-------------GGAA-TAGAACTGTTGG--------------TGTACTTGCTAGGCAAGGATAGGTTAATAGT-CACGTCAGATGCTTGTGAAGAGTTGGCTGGGGTTCCACTG---CAACGGACTGGATCACATGTAGA--GT---AGATTAGAGTATCAGATAGAAACCTG-A-GGACATGGTGGTAACTGAGCC--CAAACACC-AGATGTATC-AGGAAATATAAGATAAAG--GCTTAATCCCATCAGAAA-C----CAGAG--GGTGATTTCTTAAATCC-AATTGAGGAGGCA-A--GCTAG-AACTAATGG----ATCAAAAGGAGAGCGGGTGGAGCGGTTGTAACTTG--AACAATCCTAAGGTGC-TTACGT-GCAGGGAAGGTTTCTGGGAC-AGAAGTGTGTCATGCAGGGTACTCGAA-AATCTTTCAGGTTGGAAAC-AACAATGGGAGAATGCAAACA-------TTAGTCCATACTGATCAGTACG-CAAGTGTGATTAGGATACATTTACGAAAGAAGTTTGCT-TGTCG-CGA-GTTGTATAGGGGATGGGCCAACCGGATCGAGAGAAGGAATCAGGATTGAATAGCCAAGACGTGGAGAACAAGGGAGATCG-AGTGATTCTGCTGACGTTATGA-TGTCGAAGAGGTAT--TGGCCAAGAGCAGTTC-AGGCTTTCCACCCAGAGAATGTCTGT-GGCCAGAAAGAAAGGCTGTGG---ACCC-ATTAGCTCAGT--CAAAACGC-GAAGGTGTTCAAAA-TTACACTCC-TGGTTACAGA-AAAAGGT-AGC-AAT-GATAGTATCCGTCAGAGACGATACGTGAACTCTTCGCACG-ATAGTACACTGGTCTGCCA-ACGAGAGAGGTGGAA------ACG----CTTTCGTCAATGAAAATCAGGCATGTCTATC--G-ATTGTCTGATG-----------TAT----------GAGTGATCTCGCTCACATACTTAG--TGGAA-GTTCTCGACG-AACGTTAGAAACTCATGTC--GA--TGTA-TT-TGCTATGGATGGAG-AGC-ATCGTCCAGTTGCTGAAGCCGG-TGTGATGTAAAAACTGT-GAAGAGTAAGGA-AAACATGGTCAT-ACTGAATA-------TATGTGCCACGAAGCTGCAAA-AGTGAC-TACATGA-TCGGGTCTGGATAGTTAGTAGTTACTTTGCTGATTCACTGAAATGCAGT---ACACTTGCAAAGCAGAGACAAGGCTTGCGGAGATTTTTGGTGGCTACCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAACT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAA--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT-----C------TCATGAAATAT-TTT-----GA---CC-AGGAGG------ACAA-ACAACT-TG---TCATTACGGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATAT-TA-CCA--TAAAGAAGCTGA--CATTCAGATAT---TGCTG--CAT-GC--ATCTCAAACAG---CCCAGAACAGACACCATGC-AA-TATTCA-TCTGGG-CTATAGACATGCA---C--CGATGT-TAA--G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAA-CCAGAAA-GAC----AAACTG---GC-TGGG--ATT---CGGA-ACAGTC-CCGAG--TTTTCGATAACTAGGGGCAG--ATGA-AATAGCAACTGGATTGGGACAA-GAGAAGGATCATG-CAT------TG---CCAATGTTATACACACTCTCA-C-TGAA-TAC--GACACTGTGTCTAGTTTT--CCACTGTGTC----TAGTTTTGCTAGACG--TGGCAAGAAG-ACTG---CGC-A----G-GGCAGT-CTGGA---C-GGTACTG-C-CAG--AATT---CACAG---AAGC---------GTT-GCTGCTGC-AGTCCT---CTGC--ACC-GC-ATG-AC-ATAA-CAG-ACGACGCAATG----CGCA--TCA-T---CGAAAGG-T---T-CGAT-----TG----ATCGAACT-A-GCAA-------ATGCAC------A-----CA----CAAGGCCAGGAGGAAAATCTT-CG
gi|20 : G---TGAT---CACTGCG-TCCAA-CGGAACACTT-GGGGTATTAGTGA-TGCA----CC-GACCGGG-ATGTTGAATTGC--ACCGCTTCAGCAG-CGGACAAGAT
gi|21 : tgTCCTAAACGAACGGCAAAAGAAGAATGTATGCCTTACAGTTTCT-G--CA-AACACC-CCGCC-AGTTTGA
gi|3 : ttATG-TAGCTAT------TGGCTTGATTTTGGTGGTGA-TGGTG-GT--AGCGGTAGTGATAGTTTTAATGGTGACA-ACAGAAATTTTAACATTGTATTA-TGAT-ATAGTGGCAC-TGGGGGTAAGGGATG-CAAGTAG--TG-G--TTGGATG----CACGC-TGA--G------ATTA--CGACTGCATGGACA-GCAGACTCGTTCTTGCGAGCATCCCTTGT-CTTGCACACGCGAAGAACACA--TC---CAGTGACTGCAGCAGCGCTCTAAAT-CCTGCAA-CACCGTG-CCTACAAACAATACTGTCTGGGAGAAACGAGGAATGTTTGAATTTTGAAGACTGGTGTTGCCAGAAAGGA--GAGGATATCCGCC--AGTTTCATTACTAGGCAACCGTGCGGGAACAAAAACTGTTGGCTCAAATGTATGTGTGTTCGCTC-AATTAGGAGTAG-TTAATGGTGTTCCTT-GTTGCTC-TG--GAGGTGCC---GGT-CCACTGGTTCCACGCACTGGATCACATCCA--TTATGCTAGGT-GGA-TACTAG-TGCA--TCAG-ACGGACATGGCCA-ACCTC-TCCACCAAACACCTAGATATATCCAGGAAAAGAAAGG-AAGGCCACTTCA--CCGTTAAAAAACCCCACAGAGATGGTGTTTTCTTTAATCCCGATTGACAAGACACATGAACAG-AA-TAATGACGACATCAAG-GGAGA-CG--------------------------ACCCTA--GTGCCCTACGTGGTCGG-ATAATTGC-GGGACCAGAAAT-TGCTA----GAGTAATCGAAGAAT-TC-CAAGATGAGAACCAACACTAG-AGACGGCAAACAGCAGACATAGGTCATTA-TGATCAG-AAA-CAAGTGTA--CAGGCCTCATTTGTGAAAGATGTATGCTCTCTCGTCGGTATCATAGAGAATATTGGA-AACTCACTCAAGGAGGTGAGTCAAGAT---GTAGTAAAC-C-TGGA-CACAAAG---------------CTG-TGA-----TGAATGCC-AAGAGA-AT-A-GGATAAGAGCAGTTCGAGGATCTC-AAC-AGAGAGTGTCTGTTGGACAGAACAAGGAAAT-TGGCTGACCCCATTCAC-CAAG-ACAG---GCTGATGGCATTCAGCCCTTCCACTCCAGGGAGCAAGAGAAAAGGTCAGT-GACAGGTCACCGCCGTCAAAAATAAT-TTTGATCTCTTTGTACGCAT-GTACATTGG-CTGCAAGATGAGATA--TGAAATTCTTGACGAGTTCTTCCGTCA-CGAGAATCAGGCGTGT-TCTCTTGCATTGTGTTATGGTGGAAGCCTCTGCACTGATACCAAAGTGAT----CTCACATAC----C-TGGAATATGTATAACGCAAAAACAGAGACTTCTGTCACAACCTGTA-TTGTGCT-TG-ATGGATCAGCCATTGTCCAGATGCTAAAGATAACTGC-AT-TAAAGGCCTTTGAAGAGTATGCAC-AACA-GATCGTCACCCCGTATACCAGGTATAT-GCGCGAAGCTGTAAACAGTATCACTCCTGAATCTGGTCTGGA------ATACTTACCTCGCTGATTTACTGAAATGCAGT---ACATATGCAAAGCGGAG--------TGCGAAGATGTGTGATGGCTGCT-------------------------GCAGGAAACTGACATAACT-TCCTAAGAATG-GACGGCTT--AAAAAC--AG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CTAATTGCCAGTTATCAGGGAATGA-TTT-----GA---CT-A----G-----GACAA-GCAACT-CG---CGATTGCTGATGG-AGA-----GGC--AGTTCTC--AGCAAACAACTACT-----GCCAGATCTTACC--T-TATTCGCCCCC-ATGT-AA-TCA--TAAAAAAGCTGA--CAGTCAAATGC---TGCTG--AAT-GT--TTCTCACGCAG---CCCAACATTCACACCGTTC--AATACTCA-TCT-AGACTCTAGACA-------C--TAATGT-T-GT-G-CTGG--A----AGT----AT---CCCTA--GCA--CA-GGA--TATGC-AACCAGAAGAAAA----AATATG---AC-TGGC--ATT---CGGA-ACAGT--T-AAGAGTTTCCAATACCTAATAGCAC--ATGA-AATAGCACCT
gi|4 : aGAA-GTCTCCGACGCAAAGACAGAGAATCCTTTCACGAACTGTAATT-TGCT-TG-ATGGAGCAGCCATTGTCCAGGTGCTGAAGCCAGCTTC-AT-CAAAGACCTTTGAAGAGTATTCACAA-CA-GGTCGTCATTCCATA-------TATGT-CCACGAAACTGCGAATAGTGACACACCTAGATCTGATCTGGG------ATACTTACCTTCCTGATTCACTGAAAGGTAGTAG-ACAGTCACAGAG--GGGACAAGGCGTGCTGAGACGTGTGGTGGCTGCCGCTGCCAAACCA----------------GGAAACTGGCAGACCT-TGCTACCGATGTGACAGCAA--CAAGACTGAAACCTGGTTCAGG-TT-CCCTT-CT-CAGCAG-CT------------TCATGGAATGGCTTT-----GA---CCCAGGGGA-----GACAA-ACA-CT-CG---TCATTTCTTATG---GA-----ATGCCAGTGCTCCCAGCAAGCCACAACT-----GCCAGAT-TGACT--TACAATTG-TCC--ATGT-AAACCCACCGAAAAAGCTGA--CAATTGGATGGGGTTGCTG--CATTGC--CTATTACACAAGTTCCCAG--TGTACACCATGCCAAATACTTA-TCCGGGACCTTGGACAC------C---GATGTCTGGCTG-CTGG--CCCCCAGT----GT---CCCTT--GCATCCA-GGA--GTTGCAA-TCATGTAAGAC----AACCTG----TGTTACTAATT---TGGA-ACAGGC-T-AGAA-TTTCAGATACCTAGCAGCAA--ATGA-AATAGCAGCTGGATTTGGACGA-TAGAAGGCTCATG-CAC------TA---CCAATGTTT--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAATT------A-----------------TGCGAGAAG--TGGCAAGAAG-ACTA---CAT------G-GACAAA-CTGGA---C-GGTACTG-C-AAT--AACT---CACTG---AGGCGCTGCTGCTGCT-GCTGCTGC-TGTCAT---TTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGATGCAATG----TGCA--TCA-T---CGAGAGG-TC--CGTGATCCTTTTATATGATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATATT-CGC-----AAGGAAGAACAATt
gi|4 : tgcttggaaTTGAAATCT-AC-ATTTGCTGATATCTCTG-GATATAATG-TAGCTAT------TGACTTGATTCTGGTgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagataccagaatcaagtcaatagctacattatatccagagatatcagcaaatgtagatttcaagtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : tgcttggaagaagtctccgacgcaaagacagagaatcctttcacgaactgtaatttgcttgatggagcagccattgtccaggtgctgaagccagcttcatcaaagacctttgaagagtattcacaacaggtcgtcattccatatatgtccacgaaactgcgaatagtgacacacctagatctgatctgggatacttaccttcctgattcactgaaaggtagtagacagtcacagaggggacaaggcgtgctgagacgtgtggtggctgccgctgccaaaccaggaaactggcagaccttgctaccgatgtgacagcaacaagactgaaacctggttcaggttcccttctcagcagcttcatggaatggctttgacccaggggagacaaacactcgtcatttcttatggaatgccagtgctcccagcaagccacaactgccagattgacttacaattgtccatgtaaacccaccgaaaaagctgacaattggatggggttgctgcattgcctattacacaagttcccagtgtacaccatgccaaatacttatccgggaccttggacaccgatgtctggctgctggcccccagtgtcccttgcatccaggagttgcaatcatgtaagacaacctgtgttactaatttggaacaggctagaatttcagatacctagcagcaaatgaaatagcagctggatttggacgatagaaggctcatgcactaccaatgtttcacgctctcactggatgtgacactgcgtctaattatgcgagaagtggcaagaagactacatggacaaactggacggtactgcaataactcactgaggcgctgctgctgctgctgctgctgtcatttgcaccgcgtgacataccagacgatgcaatgtgcatcatcgagaggtccgtgatccttttatatgatcgaaccagcaaatgcacagacattgacaaggccaggaggaaaatattcgcaaggaagaacaatgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagatAG--AACT---CACCG---AGGC---------GCT-GCTGCTGC-TGTCAT---TTGC--ACC-CT-GCG-AC-ATAC-CAG-ACAATGCAATG----CGCA--TCA-T---TCAGAG-----------------------ATCGAAAC-A-GCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAGAgtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : TTGAAATCT-AC-ATTT-------GCT----GAT---ATG-TAGCTAT------TGACTTGATTCTGGTacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacataccagaatcaagtcaatagctacatatcagcaaatgtagatttcaagt
gi|6 : agaactcaccgaggcgctgctgctgctgtcatttgcaccctgcgacataccagacaatgcaatgcgcatcattcagagatcgaaacagcaaatgcacagacattaacaaggccaggaggaagaacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacatCCAGGACTGTAGACAC------CAATGCTGT-AGGT-GACTGGTGC----AGTTCGTGTTCGCCATGCATCA--TATGGAGTATTGCAA-CGAGAAA-GACTAGAGAACTGTGAGTATGGACTATTGCATGAAGACAGACGC-CAGA-ATTCT-ATAACTGGTAGCAGCCATGAGAATAGCAGCTGGATTGGGACGACAAGAAGGG-CATGGTACAGCGGATAGACTCAAAGT-C--AATGTCTTCAACGTGGAATGTCCACCACT-CGT-TAGTCAA--C-A-TGT--A----T---ATTGCTAGGAGAGTGGCAG--AC-ATTATCTCATTA----C-GACAATGCTAGAAGACAGGTACTG-TACAATTAACTTCGCGTGA---AGGCA--------GCTAGCTGC-GCATGTCATGACTTGCCAGCCAGCAGTGGACTAGACACAG-ACGATGCA-TGAGCACGCAATTCAGTGGGCGAGAGG-TGGTCGTGATCCTTTTGTAT-ATCGAACCGA-GCAAGAATAAGATGTAC------AGAGATCATTGACG----CAGGGAGAAAATCTTGGGC-----AAGGAAGAgt
gi|7 : cagcattaggcaTGGC--ATT---TGGA-GCAGGC-C-AGAA-TTTCCTATACCTAGCAGCAC--ATGA-AATAGCAGCTGGNNNNNNNNNN-NNNNNNNNNNNNN-NNN------NN---NNNNNNNNN--NNNNNNNNNN-N-NNNN-NNN--NNNNNNNNNNNNNNNNNN--N-NNNNN--N----N---NNNNNNNNNNN--NNNNNNNNNN-NNNN---NNN-NNNNGG-GACAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCTG---AGGC---------ACT-GCTGCTGC-TGTCAT---CTGC--ACC-AC-GTG-AC-ATAC-CAG-ACGATGCAATG----CGCA--TCA-T---CGAGAGGTT---CGTGATCCTTTTGTATAATCGAACC-A-GCAA-------ATACATGTACAGAGA---CATTGACAAG----GGAAGAAAATCTT-CGC-----AAGGAAGAACAATcgaatgagtgcatcgctcatccctccaaacgaaggcagcgtcgttggcggaacatgtaaagagcggcaggtgtatcaagaaatggtgtgtgagcagatactgggatcccaacacacaaatcgtccgccaacaaccaactggggttggtcaaggacgtgaaggacagtacacaccttactggaccgctaccctgattgcagctcacagcgatatgagcatggttttcatgtgcaaaagcagaacagggtagtgggacg
gi|9 : tggtCACAAGGCAGTGACGAGAC--ACGTCGATGTAT-----CTGCCGATGCCACAC--AGTAAAACC--T-GCAGAGAGCTCTCCGACGTATTCGACGAACG-GAT-GCCAAACAAGATAG-G--CTG-TTCAGGATTGCC--TGCTGCAGCAGGCT-----C------TCATGGAATGG-TTTTGTTTGAACACT-ATAAGGCGATAGACGAGACAACTTCGATACCAATACTGA-GATAGATAATGAGG--AATGCTC--AGCAAGACA-TCCT-----GCCAGATCT-ACTTAC-AATTCG-CCCCAACGTGAG-AGGACGACAGAAGCTGgagcagctcatccctccaacgaaggcagctctggaggaacatgtaaagagggcagtgtatcaaggaaatgtgtgtagtcagatactgctaccaacaccaaatcgtcctccaccaaccaactggggttggtcaag
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CCATTTTAGAAGAATGTCAGTGTAATCTAGCTTCAGATGCTAGACCATATAGCATGTCAGTATTATACCTAAGACATTTACAGGACTAATTAAGCCATTCATTTTAAAGTATTGTGTTGAATCCAATTTTTGCCTAGATAATTTCCAAATACAATCACGTGACATACTGTGGTAGATAATATCAAGTTGAAATTGGTACCATTGGATTTCTTGCGCCCACCCCAACATATACATATTTAGATATTAAAATCAAGTCAATAGCAGCATTGTGTCAAGAGATAATAGCATTTGGATTTCAAGTTGCGGCCATTTTGAAATCCAATATGGCGGACTTACAGAGAGAATTTCAAGTGGCCCAATAACTGAAAATGTTCGTAACATATTAATGAATATTTGTGCCAAATTTGGTGCTTGCATACCGAATTGTACACTTCTTACAAATACCGGTATTTGGGCTAAGCCGCCCGACTAAAA
Unaligned ( gi|10 ): TGCGCTACAATGCCCCAATAAAGATACATTTAGATTCCGGAATAACTGCAATATATCCACAGATAATAGCAAATGTATATTTCAAGTAGCGGCCATTTTGAAATCCAATATGGTGGGCACTTAAAAAGAATTTCAAGAGGCGCAATATCTGAAAATGTTTGCAACATGTTAGTGTACATTTGTGCAAAATGTGGTGCTTGTATCACAAAATGCACAACAGGTTTGCTATGCTGCTCCGCTATTATAAC
Unaligned ( gi|11 ): TTGACAATACCAAGTGGTAATTGATAAAATTGGATTCTTGAACCCCTGAATCGAGTCAATATATGCATTATGCACACAGATGATAGCAAATGTAGATTTCATGTGGTTGCTATTATGAAATCCAATACAGTGGACATGTAGAATTTCAAGTGGCCCAATATTTGAAAATGTATATAATATT
Unaligned ( gi|13 ): GGCCCAATATCTGAAACATGATCGCATATTAATATACTCATTTGTACATATATTGGTGGCTGGCTAGTAGTTCACAGAAGTCATGCGCAATAGTTTGCTTATTGTCTGTTTTCGCTACTTAGTTAGAAT
Unaligned ( gi|15 ): TGGTTTCTTGCAAGAGCAAGAAAGGGTGTGAGGAGCTGCAAGTGCAAAAAGGCTGCCCTTCAATGCACAGCCCTCTGTGAATGTGAAGGGAACCGCACATGTTGATGAGCCAAGAACA
Unaligned ( gi|17 ): GCCATTTTGAAATCCAATATTGCGGACACATAGGGAAAATTTCAAGTGGCTCAATATCTGAAAAACATGTTAAAGTACATTTGTACCAAATTTGGTGCTTGTAT
Unaligned ( gi|19 ): AAAATGATCGTTTTCAACAGTATAGAGGTACATTTGTACCAAATTTGGGTGCTTGTATCACAAAATAGCGCATAATTTGCTAATGCTGTTTGCTATAT
Unaligned ( gi|22 ): CCTGTATCACAAATGCATAATTCTTTAGATTATTTGAGCTAACCCGCCCGC
Alignments
lowQualScore : 111111111111111111111111 1111111111111111111111111
lowQualScore : 111 1 222 1 222 111 1 1 1 2222 1 11 1 1 1 1 1 11 11 333333 22222 11 11 11 11 1 22222 1 2222222 11 1 11 1 1 11 1 1 444444444444444 111 222222 11 1 11 7777777777777777 1 1 1 55555 1 1 2222 1111 11 2222 1 33 1 11 222 1 1 1 111111111111111111111111 555555555555555555 11 22 7777777777777 77777777777777 1 1 1 1 11 222 22222 222222222 1 1 1 11 111 1 1 1 1 111 11 3333 11 11 1 1 1 1 11 222222222222 11 1 1 1 11 1 4444444 1 1 1 3333 1 222 1111 1 33333333 1 1 222 1 1 1 3333 11 222222222222222 1 11111 1 1 11 5555555555555 11 1 11 1111111111111111111111111 22 222222 1 1 1 1 1 1 1 2222222 1 222222 333 1 555555555555555 11 111111 11 444444444444 22222 111 33333333 111 111 22222 11 11 22222 1111 11111 11 22222 111 1 111 111 11 1 1 44444444444 222222 2222222 333333333 111 11 1111 2 1 1111 333333 111 111 11111111 111 1 111111111111 1111 1 11 77777777777777777777777 111 333333 111 111 111 333333333 111 1111 111 4444444444444444444444 2222222 111111 111 1 22222
lowQualScore : 1 999 5 111 1 5 333 999 3 3 3 7 3 8888 6 3 88 3 5 5 5 5 88 88 000000 66666 88 1 1 1 88 88 77 1 5 6 55555 6 3 5555555 44 0 6 6 5 77 5 5 88 0 5 222222222222222 111 8 333333 0 0 44 3 88 9999999999999999 7 7 3 3 6 3 11111 3 3 6 1111 7 2222 88 7777777 0000 3 7 33 3 11 88 333 0 0 3 3 6 3 000000000000000000000000 333333333333333333 44 00 7 3333333333333 6 88888888888888 3 3 1 6 3 3 88 1 333 7 44444 777777777 3 3 3 88 777 3 3 7 2 6 2 7 111 88 0 7 0000 88 1 6 22 2 8 33 1 0 0 555 0 0 66 4 111111111111 1 33 2 8 1 0 1 1 0 6 3 7 6 6 99 6 3 3333333 1 3 3 3 0000 0 6 7 7 0 3 1 333 7777 3 6 00000000 6 6 7 3 3 888 2 3 3 7 0000 6 6 55 6 555555555555555 7 0 6 88 2 6 99999 1 3 6 3 6 7 6 88 4444444444444 44 0 3 44 6 6666666666666666666666666 00 333333 0 0 0 2 11 3 8 0 0 0 0 2 1 8 8 0 5 0 8 1 6666666 8 6 0 0 333333 555 0 0 0 1 1 8 0 666666666666666 1 8 8 44 11 111111 8 8 8 11 8 8 8 333333333333 8 00000 444 8 33333333 8 0 8 444 3 222 00000 11 11 00000 5 5555 1 8 8 8 33333 33 1 2 55555 444 0 555 0 1 777 99999 33 3 6 0 3 0 1 77777777777 666666 8 3333333 111111111 111 11 8 1111 0 0 0 7777 1 000000 999 111 6 1 22222222 5 1 1 000 5 5 1 666666666666 6666 5 1 5 33 0 66666666666666666666666 1 77 5 000 0 111111 5 5 3 111 6 999 99 111 0 1 111 333333333 6 6 111 99 6 6 6 6 3 6 6 0 4444 99 6 111 9999999999999999999999 6 6 1111111 999999 111 2 6 55555
lowQualScore : . ... . ... . . ... ... . . . . . .... . . .. . . . . . .. .. ...... ..... .. . . . .. .. .. . . . ..... . . ....... .. . . . . .. . . .. . . ............... ... . ...... . . .. . .. ................ . . . . . . ..... . . . .... . .... .. ....... .... . . .. . .. .. ... . . . . . . ........................ .................. .. .. . ............. . .............. . . . . . . .. . ... . ..... ......... . . . .. ... . . . . . . . ... .. . . .... .. . . .. . . .. . . . ... . . .. . ............ . .. . . . . . . . . . . . . .. . . ....... . . . . .... . . . . . . . ... .... . . ........ . . . . . ... . . . . .... . . .. . ............... . . . .. . . ..... . . . . . . . .. ............. .. . . .. . ......................... .. ...... . . . . .. . . . . . . . . . . . . . . . ....... . . . . ...... ... . . . . . . . ............... . . . .. .. ...... . . . .. . . . ............ . ..... ... . ........ . . . ... . ... ..... .. .. ..... . .... . . . . ..... .. . . ..... ... . ... . . ... ..... .. . . . . . . ........... ...... . ....... ......... ... .. . .... . . . .... . ...... ... ... . . ........ . . . ... . . . ............ .... . . . .. . ....................... . .. . ... . ...... . . . ... . ... .. ... . . ... ......... . . ... .. . . . . . . . . .... .. . ... ...................... . . ....... ...... ... . . .....
lowQualScore : 0 000 5 555 0 0 333 777 7 3 3 3 3 3333 7 3 33 3 5 0 5 0 00 55 000000 55555 55 0 0 0 00 00 55 0 5 7 33333 7 3 7777777 00 7 7 7 0 55 0 5 00 0 0 888888888888888 222 0 000000 8 8 00 3 33 0000000000000000 3 3 3 3 7 3 77777 3 3 7 7777 3 3333 33 7777777 3333 3 3 33 3 77 33 333 7 7 3 3 7 3 000000000000000000000000 777777777777777777 00 77 3 3333333333333 7 33333333333333 3 3 0 7 3 3 33 0 333 3 77777 000000000 3 3 3 33 777 3 3 3 0 7 0 3 000 33 7 3 7777 33 0 7 00 5 8 88 0 0 0 888 0 0 55 2 000000000000 2 88 5 8 0 0 0 0 0 7 3 3 7 7 33 7 3 3333333 0 3 3 3 3333 7 7 3 3 7 3 0 333 7777 3 7 77777777 7 7 3 3 3 000 0 3 3 3 0000 7 7 77 7 000000000000000 3 7 7 33 0 7 00000 0 3 7 3 7 3 7 33 3333333333333 00 7 3 00 7 7777777777777777777777777 00 777777 0 8 2 5 00 2 8 0 0 0 0 5 0 0 0 8 0 6 0 4 0000000 0 0 8 8 000000 000 2 8 4 4 0 8 6 444444444444444 0 0 0 88 00 444444 0 0 0 00 0 0 0 000000000000 0 00000 000 0 22222222 0 8 0 000 8 444 00000 00 00 00000 0 4444 4 0 0 0 22222 88 0 0 00000 888 0 000 2 0 555 55555 22 2 5 0 2 6 0 66666666666 444444 0 0000000 222222222 666 00 0 6666 8 4 6 0000 0 000000 333 777 7 0 33333333 2 0 0 222 7 7 4 666666666666 1111 7 4 7 66 7 99999999999999999999999 0 99 7 000 7 333333 7 7 7 777 7 222 22 777 7 0 777 333333333 7 7 777 22 7 7 7 7 2 7 7 7 2222 22 7 777 8888888888888888888888 7 7 7777777 222222 777 5 0 00000
consensus : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ATCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTG-A-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACG-CAAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC---GAAAGGCTGTGGCCGACCCCATTCGC-CAGT-ACAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGC-GAC-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGT-CTATCTGCATTGTCTGATGGTG-------CTGCG----------AGTGATCTC-CTCACATACTTAGC-TGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT-A----G-GGCAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
Reference ( family-3946 ) : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ATCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTG-A-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACG-CAAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC---GAAAGGCTGTGGCCGACCCCATTCGC-CAGT-ACAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGC-GAC-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGT-CTATCTGCATTGTCTGATGGTG-------TTGCG----------AGTGATCTC-CTCACATACTTAGC-TGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT-A----G-GGCAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
gi|1 : CATTACACC--CATCAAGGGTGTTTTTTTTCGTCCTA-AGATGGCCTGATTAACACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTTCAATCGCTTCGGCAG-CGACTAAGATGA-GTTCATTTCCAATTTTCACAATA-AGG--AT--CGAT------TGT-----CTG--ATTAAATATATTACTGCA--CGGAAGGAAGGGTTTGTA--ACGGTT-TCTTAAACCAGCGACAAAA--TAGATGAATGCCTTGCAG-TTCTTG--C-GAACACCTCTGTCGAATTTGAGAA-TAGA--CTCAAAAAACAAAACATCACCCGATTTACGTCGAGATCTTACGATC-A--AAG-GCT-T---ATCTTATG-TAGCTAT------TAACTTGATTCTGGTGGTG-GTGGTA-GT--AGGGGTTGTGGTAAT-------------AACTGAGATGTTAACATTGCATCA-TGAG-ATGGTGGCAC-TGTGGA-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACTTGTGAAAGCCGATA-TTG--CAAAAGCAGGGGCA-GCAGACTCCTTCCTGAGGGCATCTCGTGT-CTTGCGCACAAGAAGAGCAAA--TC---AAGTGACTGTAGCAGCATTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCA---CT-----------------AATGTCTGAA------AGAAA-------CCAGGAATG-CAGAGGA---CATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATCG-TTAATTATGTACCTC-GATGCTC-TG--ACGATGCT---GGTTCCAC--GT-GCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTGAA-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAAT-TAAGATAAGGCTACTTCA--CCATCAGAAAAC---ACAGAG--GGTGTTCTCTTCAATCCCAATTGACCAGGCACA--AGCAG-AA-CAATAGCTGCATCAAA-GGAGA-CGG-TGGAGCAGTTG-GGCTCACTGACAATCCTA--GTGCCTTACGTCGCAGG-AAGGTTCT-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCT-TCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TACGTCATTA-TGATCAG-ACGCCAAGTGT-AT-AGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCATAGAGGAGATGGGC-AACCCGTTCGAGGAGGGGAATCAGGAT---GTAGCCAAA-C-TGGA-AACAAGGGAGATCGCAG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-ATCATGGCCAAGAGCAGTTCAAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC----AAAGGCTGTGGTCGACCCCATTC-C-TCGTAACAA---GCTGAAGGTGTTCAGCACTTCCACTCCAAGGTTCCAGAACAAAGGTCAGCAAAT-GCTCGTCTCCGTCAAGAACGAC-CGTGAACTCTTCGCACGCAT-GTACACT-GTCTGCCAGACGAGAGA--TGGAA------AC-----CTTTCGTCA-TGAAAATCAGGCATGT-CTATCTGCATTGTCTGATGGTA-------T--CG----------AGTGATCTC-CTCACATGCTTAGCTTGGAA-GTTTCCGACGCAAGTACAGAAACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTAGATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-GTACACTTGCAAAGCAGAGACAAGGCTTGCGAAGATTTTTGGTGGCTGCCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAGCT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAG--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATAG-TTT-----CA---CC-AGGA-G-----GACAA-ACAACT-TG---TCATTACTGACGA-CGA-----AGG--AGTGCTC--AGCAAGCCACTACTGCCAGGCCAGATCTGACT--C-CACTCG-TCCC-ATTT-AA-CCGACTAAAGAAGCTGAAGCATTCAGAT-A---TGCTGTCAAT-GCAATCTTCAAACAG---CCCAGAACAGACACCATGC-AAATA-TCACTACGGG-CTATAGACACATCGATC--CGATGT-TAAG-G-CTGG--C----AGTC---GTG--CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTC---GCATGGG--ATT---CCGA-ACAGTC-C-GAGT-TTTTCGATAACTAGGGGCAG--ATTG-AATAGCAACTGGATGGGAACAA-GAGAAGGCTCATGCCAT------TG----CAATGTTTA-CACACTCTCA-CGTGAA-TATC-GACACTGTGTCTAGTTTTTCC-ACTGT--CGTAGT---TTTGCTAGACG--TGGCCAGAAGAACTG---CGC-A----GTGGCAGT-CT-GA---C-GGTACTGTC-CAG--AATT---CACAGTCTAAGC---------GCT-GCTGCTGC-TGTCCT---CTGC--ACC-GC-ATG-AT-A-AT-CAGAACGACGCAATG----CGCA--TCA-T---CGAAAGG------GTG--CCGTTTG----ATCGAACT-AGGCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAAATCTTCCGCAATTAAAGAAAGAACAAT
gi|12 : aGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAa
gi|14 : A-AATAGCAGCTGGATTGGGATGA-GAGATGACTCATG-CAC------TA---CCAATGTTC--CACGCTCTCT-C-TGGA-GGT--GACACTGTGTCTAG--------------------T---TTTGCTTCACG--TGGCAAGAAG-ACTG---CAT------G-GGTAAT-CTAAA---C-
gi|16 : GCAGCTGGATTGGGATGA-GAGAAGGCTCATA-CAC------TA---CCAATGCGC--CACACTCTCT-C-TGGA-TGT--GACACTGTGCCTAGTTTT----ACT-T--C----------------ATG--TGGCAAGAAG-ACTG---CAT------G-GGCAAT-CT
gi|18 : ATTGAACAGG---A--ATCGGTGA-TAATGGCTGCATCAAA-GGAAA-CGA-TGGAGCAGTCG-GTCTCGCTGACAAACCTA--GTGCCTGACGTCGCTGG-ATGGTTGC-TGGACaaa
gi|2 : CATTAAACGAGCATCA-GAGTGTTTTT---CGGTCTACAGATG---TGATTA-CACAGCGGTCCAAACGGGACATTCTGGGGTGTTAGTGGGTGCGAGATTCCGACCGGGGTTGTTGATTTTC--ATTGGATTGGCAGTCGGACAAGATGAAGTTCATTTC-AATTT-CACAATAGAGGGAATAACGATGTTAAATGTAGTAGTTGTAATGATATAAATTACTGCAGTCGGAAGGA--GGTCTGTACGAGGGTTATATTTAAACAG-GGCAAAA--AG--TGAATGG-TTGAAG-TTAT-GTGCAGAACAC-TCTGTCGAAATT-AGAAGTAGAGGCT-GAAAAACAAA-CATC--CCGATTTACGTCGAGATTT-ACGATTTA--AAGAGCT-TGAGATTTTATGGTAGGTGTGAATGTTGAATTGAT-ATGG--GTGAGTGGTGAGTGAAGGGTTTGTGGTA--T-----AGTG-TAGACTGAG--TTTAACATTGT--CAATGAGGATGGTGG-ACGTGTGGGAT---GCTGTCAAG-AGGGTGTGCTTTGAGTGAAAGCA-GTGTGA--GCCGATAATTGGAC-AAAGCAGGGGCAAGCAGACTCCT-CTTG--AGCATCTCGTGGATTTGCGCACATAGAGAGAAAAATTCGGAAAGTGACTGTAATGGCATTGTACATGCTTGCAAGCAC-GTGACCTACAGT--ATA---------------------TGTCTGAA------AGAAC-------ACAGGAATGACAGGAGA-ATCATCCTGAGTTTGAAGACT-------------GGAA-TAGAACTGTTGG--------------TGTACTTGCTAGGCAAGGATAGGTTAATAGT-CACGTCAGATGCTTGTGAAGAGTTGGCTGGGGTTCCACTG---CAACGGACTGGATCACATGTAGA--GT---AGATTAGAGTATCAGATAGAAACCTG-A-GGACATGGTGGTAACTGAGCC--CAAACACC-AGATGTATC-AGGAAATATAAGATAAAG--GCTTAATCCCATCAGAAA-C----CAGAG--GGTGATTTCTTAAATCC-AATTGAGGAGGCA-A--GCTAG-AACTAATGG----ATCAAAAGGAGAGCGGGTGGAGCGGTTGTAACTTG--AACAATCCTAAGGTGC-TTACGT-GCAGGGAAGGTTTCTGGGAC-AGAAGTGTGTCATGCAGGGTACTCGAA-AATCTTTCAGGTTGGAAAC-AACAATGGGAGAATGCAAACA-------TTAGTCCATACTGATCAGTACG-CAAGTGTGATTAGGATACATTTACGAAAGAAGTTTGCT-TGTCG-CGA-GTTGTATAGGGGATGGGCCAACCGGATCGAGAGAAGGAATCAGGATTGAATAGCCAAGACGTGGAGAACAAGGGAGATCG-AGTGATTCTGCTGACGTTATGA-TGTCGAAGAGGTAT--TGGCCAAGAGCAGTTC-AGGCTTTCCACCCAGAGAATGTCTGT-GGCCAGAAA---GAAAGGCTGTGG---ACCC-ATTAGCTCAGT--CAAAACGC-GAAGGTGTTCAAAA-TTACACTCC-TGGTTACAGA-AAAAGGT-AGC-AAT-GATAGTATCCGTCAGAGACGATACGTGAACTCTTCGCACG-ATAGTACACTGGTCTGCCA-ACGAGAGAGGTGGAA------ACG----CTTTCGTCAATGAAAATCAGGCATGT-CTATC-G-ATTGTCTGATG-----------TATG----------AGTGATCTCGCTCACATACTTAG--TGGAA-GTTCTCGACG-AACGTTAGAAACTCATGTC--GA--TGTA-TT-TGCTATGGATGGAG-AGC-ATCGTCCAGTTGCTGAAGCCGG-TGTGATGTAAAAACTGT-GAAGAGTAAGGA-AAACATGGTCAT-ACTGAATATA-------TGTGCCACGAAGCTGCAAA-AGTGAC-TACATGA-TCGGGTCTGGATAGTTAGTAGTTACTTTGCTGATTCACTGAAATGCAGT---ACACTTGCAAAGCAGAGACAAGGCTTGCGGAGATTTTTGGTGGCTACCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAACT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAA--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGAAATAT-TTT-----GA---CC-AGGAGG------ACAA-ACAACT-TG---TCATTACGGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATAT-TA-CCA--TAAAGAAGCTGA--CATTCAGATAT---TGCTG--CAT-GC--ATCTCAAACAG---CCCAGAACAGACACCATGC-AA-TATTCA-TCTGGG-CTATAGACATGCA---C--CGATGT-TAA--G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAA-CCAGAAA-GAC----AAACTG---GC-TGGG--ATT---CGGA-ACAGTC-CCGAG--TTTTCGATAACTAGGGGCAG--ATGA-AATAGCAACTGGATTGGGACAA-GAGAAGGATCATG-CAT------TG---CCAATGTTATACACACTCTCA-C-TGAA-TAC--GACACTGTGTCTAGTTTT--CCACTGTGTC----TAGTTTTGCTAGACG--TGGCAAGAAG-ACTG---CGC-A----G-GGCAGT-CTGGA---C-GGTACTG-C-CAG--AATT---CACAG---AAGC---------GTT-GCTGCTGC-AGTCCT---CTGC--ACC-GC-ATG-AC-ATAA-CAG-ACGACGCAATG----CGCA--TCA-T---CGAAAGG-T---T-CGAT-----TG----ATCGAACT-A-GCAA-------ATGCAC------A-----CA----CAAGGCCAGGAGGAAAATCTT-CG
gi|20 : G---TGAT---CACTGCG-TCCAA-CGGAACACTT-GGGGTATTAGTGA-TGCA----CC-GACCGGG-ATGTTGAATTGC--ACCGCTTCAGCAG-CGGACAAGAT
gi|21 : tgTCCTAAACGAACGGCAAAAGAAGAATGTATGCCTTACAGTTTCT-G--CA-AACACC-CCGCC-AGTTTGA
gi|3 : ttATG-TAGCTAT------TGGCTTGATTTTGGTGGTGA-TGGTG-GT--AGCGGTAGTGATAGTTTTAATGGTGACA-ACAGAAATTTTAACATTGTATTA-TGAT-ATAGTGGCAC-TGGGGGTAAGGGATG-CAAGTAG--TG-G--TTGGATG----CACGC-TGA--G------ATTA--CGACTGCATGGACA-GCAGACTCGTTCTTGCGAGCATCCCTTGT-CTTGCACACGCGAAGAACACA--TC---CAGTGACTGCAGCAGCGCTCTAAAT-CCTGCAA-CACCGTG-CCTACAAACAATACTGTCTGGGAGAAACGAGGAATGTTTGAATTTTGAAGACTGGTGTTGCCAGAAAGGA--GAGGATATCCGCC--AGTTTCATTACTAGGCAACCGTGCGGGAACAAAAACTGTTGGCTCAAATGTATGTGTGTTCGCTC-AATTAGGAGTAG-TTAATGGTGTTCCTT-GTTGCTC-TG--GAGGTGCC---GGT-CCACTGGTTCCACGCACTGGATCACATCCA--TTATGCTAGGT-GGA-TACTAG-TGCA--TCAG-ACGGACATGGCCA-ACCTC-TCCACCAAACACCTAGATATATCCAGGAAAAGAAAGG-AAGGCCACTTCA--CCGTTAAAAAACCCCACAGAGATGGTGTTTTCTTTAATCCCGATTGACAAGACACATGAACAG-AA-TAATGACGACATCAAG-GGAGA-CG--------------------------ACCCTA--GTGCCCTACGTGGTCGG-ATAATTGC-GGGACCAGAAAT-TGCTA----GAGTAATCGAAGAAT-TC-CAAGATGAGAACCAACACTAG-AGACGGCAAACAGCAGACATAGGTCATTA-TGATCAG-AAA-CAAGTGTA--CAGGCCTCATTTGTGAAAGATGTATGCTCTCTCGTCGGTATCATAGAGAATATTGGA-AACTCACTCAAGGAGGTGAGTCAAGAT---GTAGTAAAC-C-TGGA-CACAAAG---------------CTG-TGA-----TGAATGCC-AAGAGA-AT-A-GGATAAGAGCAGTTCGAGGATCTC-AAC-AGAGAGTGTCTGTTGGACAGAACAAGGAAA---T-TGGCTGACCCCATTCAC-CAAG-ACAG---GCTGATGGCATTCAGCCCTTCCACTCCAGGGAGCAAGAGAAAAGGTCAGT-GACAGGTCACCGCCGTCAAAAATAAT-TTTGATCTCTTTGTACGCAT-GTACATTGG-CTGCAAGATGAGATA--TGAAATTCTTGACGAGTTCTTCCGTCA-CGAGAATCAGGCGTGTTCTCT-TGCATTGTGTTATGGTGGAAGCCTCTGCACTGATACCAAAGTGATCTC----ACATAC----C-TGGAATATGTATAACGCAAAAACAGAGACTTCTGTCACAACCTGTA-TTGTGCT-TG-ATGGATCAGCCATTGTCCAGATGCTAAAGATAACTGC-AT-TAAAGGCCTTTGAAGAGTATGCACAA-CA-GATCGTCACCCCGTATACCAGGTATAT-GCGCGAAGCTGTAAACAGTATCACTCCTGAATCTGGTCTGGA------ATACTTACCTCGCTGATTTACTGAAATGCAGT---ACATATGCAAAGCGGAG--------TGCGAAGATGTGTGATGGCTGCTGC-------------------------AGGAAACTGACATAACT-TCCTAAGAATG-GACGGCTT--AAAAAC--AG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CTAATTGCCAGTTATCAGGGAATGA-TTT-----GA---CT-AGGA---------CAA-GCAACT-CG---CGATTGCTGATGG-AGA-----GGC--AGTTCTC--AGCAAACAACTACT-----GCCAGATCTTACC--T-TATTCGCCCCC-ATGT-AA-TCA--TAAAAAAGCTGA--CAGTCAAATGC---TGCTG--AAT-GT--TTCTCACGCAG---CCCAACATTCACACCGTTC--AATACTCA-TCT-AGACTCTAGACA-------C--TAATGT-T-GT-G-CTGG--A----AGT----AT---CCCTA--GCA--CA-GGA--TATGC-AACCAGAAGAAAA----AATATG---AC-TGGC--ATT---CGGA-ACAGT--T-AAGAGTTTCCAATACCTAATAGCAC--ATGA-AATAGCACCT
gi|4 : aGAA-GTCTCCGACGCAAAGACAGAGAATCCTTTCACGAACTGTAATT-TGCT-TG-ATGGAGCAGCCATTGTCCAGGTGCTGAAGCCAGCTTC-AT-CAAAGACCTTTGAAGAGTATTCACAA-CA-GGTCGTCATTCCATATA-------TGT-CCACGAAACTGCGAATAGTGACACACCTAGATCTGATCTGGG------ATACTTACCTTCCTGATTCACTGAAAGGTAGTAG-ACAGTCACAGAG--GGGACAAGGCGTGCTGAGACGTGTGGTGGCTGCCGCTGCCAAACCA----------------GGAAACTGGCAGACCT-TGCTACCGATGTGACAGCAA--CAAGACTGAAACCTGGTTCAGG-TT-CCCTT-CT-CAGCAG-CT------------TCATGGAATGGCTTT-----GA---CCCAGGGGA-----GACAA-ACA-CT-CG---TCATTTCTTATG---GA-----ATGCCAGTGCTCCCAGCAAGCCACAACT-----GCCAGAT-TGACT--TACAATTG-TCC--ATGT-AAACCCACCGAAAAAGCTGA--CAATTGGATGGGGTTGCTG--CATTGC--CTATTACACAAGTTCCCAG--TGTACACCATGCCAAATACTTA-TCCGGGACCTTGGACAC------C---GATGTCTGGCTG-CTGG--CCCCCAGT----GT---CCCTT--GCATCCA-GGA--GTTGCAA-TCATGTAAGAC----AACCTG----TGTTACTAATT---TGGA-ACAGGC-T-AGAA-TTTCAGATACCTAGCAGCAA--ATGA-AATAGCAGCTGGATTTGGACGA-TAGAAGGCTCATG-CAC------TA---CCAATGTTT--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAATT------A-----------------TGCGAGAAG--TGGCAAGAAG-ACTA---CAT------G-GACAAA-CTGGA---C-GGTACTG-C-AAT--AACT---CACTG---AGGCGCTGCTGCTGCT-GCTGCTGC-TGTCAT---TTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGATGCAATG----TGCA--TCA-T---CGAGAGG-TC--CGTGATCCTTTTATATGATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATATT-CGC-----AAGGAAGAACAATt
gi|4 : tgcttggaaTTGAAATCT-AC-ATTTGCTGATATCTCTG-GATATAATG-TAGCTAT------TGACTTGATTCTGGTgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagataccagaatcaagtcaatagctacattatatccagagatatcagcaaatgtagatttcaagtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : tgcttggaagaagtctccgacgcaaagacagagaatcctttcacgaactgtaatttgcttgatggagcagccattgtccaggtgctgaagccagcttcatcaaagacctttgaagagtattcacaacaggtcgtcattccatatatgtccacgaaactgcgaatagtgacacacctagatctgatctgggatacttaccttcctgattcactgaaaggtagtagacagtcacagaggggacaaggcgtgctgagacgtgtggtggctgccgctgccaaaccaggaaactggcagaccttgctaccgatgtgacagcaacaagactgaaacctggttcaggttcccttctcagcagcttcatggaatggctttgacccaggggagacaaacactcgtcatttcttatggaatgccagtgctcccagcaagccacaactgccagattgacttacaattgtccatgtaaacccaccgaaaaagctgacaattggatggggttgctgcattgcctattacacaagttcccagtgtacaccatgccaaatacttatccgggaccttggacaccgatgtctggctgctggcccccagtgtcccttgcatccaggagttgcaatcatgtaagacaacctgtgttactaatttggaacaggctagaatttcagatacctagcagcaaatgaaatagcagctggatttggacgatagaaggctcatgcactaccaatgtttcacgctctcactggatgtgacactgcgtctaattatgcgagaagtggcaagaagactacatggacaaactggacggtactgcaataactcactgaggcgctgctgctgctgctgctgctgtcatttgcaccgcgtgacataccagacgatgcaatgtgcatcatcgagaggtccgtgatccttttatatgatcgaaccagcaaatgcacagacattgacaaggccaggaggaaaatattcgcaaggaagaacaatgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagatAG--AACT---CACCG---AGGC---------GCT-GCTGCTGC-TGTCAT---TTGC--ACC-CT-GCG-AC-ATAC-CAG-ACAATGCAATG----CGCA--TCA-T---TCAGAG-----------------------ATCGAAAC-A-GCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAGAgtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : TTGAAATCT-AC-ATTT-------GCT----GAT---ATG-TAGCTAT------TGACTTGATTCTGGTacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacataccagaatcaagtcaatagctacatatcagcaaatgtagatttcaagt
gi|6 : agaactcaccgaggcgctgctgctgctgtcatttgcaccctgcgacataccagacaatgcaatgcgcatcattcagagatcgaaacagcaaatgcacagacattaacaaggccaggaggaagaacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacatCCAGGACTGTAGACAC------CAATGCTGT-AGGT-GACTGGTGC----AGTTCGTGTTCGCCATGCATCA--TATGGAGTATTGCAA-CGAGAAA-GACTAGAGAACTGTGAGTATGGACTATTGCATGAAGACAGACGC-CAGA-ATTCT-ATAACTGGTAGCAGCCATGAGAATAGCAGCTGGATTGGGACGACAAGAAGGG-CATGGTACAGCGGATAGACTCAAAGT-C--AATGTCTTCAACGTGGAATGTCCACCACT-CGT-TAGTCAA--C-A-TGT--A----T---ATTGCTAGGAGAGTGGCAG--AC-ATTATCTCATTA----C-GACAATGCTAGAAGACAGGTACTG-TACAATTAACTTCGCGTGA---AGGCA--------GCTAGCTGC-GCATGTCATGACTTGCCAGCCAGCAGTGGACTAGACACAG-ACGATGCA-TGAGCACGCAATTCAGTGGGCGAGAGG-TGGTCGTGATCCTTTTGTAT-ATCGAACCGA-GCAAGAATAAGATGTAC------AGAGATCATTGACG----CAGGGAGAAAATCTTGGGC-----AAGGAAGAgt
gi|7 : cagcattaggcaTGGC--ATT---TGGA-GCAGGC-C-AGAA-TTTCCTATACCTAGCAGCAC--ATGA-AATAGCAGCTGGNNNNNNNNNN-NNNNNNNNNNNNN-NNN------NN---NNNNNNNNN--NNNNNNNNNN-N-NNNN-NNN--NNNNNNNNNNNNNNNNNN--N-NNNNN--N----N---NNNNNNNNNNN--NNNNNNNNNN-NNNN---NNN-NNNNGG-GACAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCTG---AGGC---------ACT-GCTGCTGC-TGTCAT---CTGC--ACC-AC-GTG-AC-ATAC-CAG-ACGATGCAATG----CGCA--TCA-T---CGAGAGGTT---CGTGATCCTTTTGTATAATCGAACC-A-GCAA-------ATACATGTACAGAGA---CATTGACAAG----GGAAGAAAATCTT-CGC-----AAGGAAGAACAATcgaatgagtgcatcgctcatccctccaaacgaaggcagcgtcgttggcggaacatgtaaagagcggcaggtgtatcaagaaatggtgtgtgagcagatactgggatcccaacacacaaatcgtccgccaacaaccaactggggttggtcaaggacgtgaaggacagtacacaccttactggaccgctaccctgattgcagctcacagcgatatgagcatggttttcatgtgcaaaagcagaacagggtagtgggacg
gi|9 : tggtCACAAGGCAGTGACGAGAC--ACGTCGATGTAT-----CTGCCGATGCCACAC--AGTAAAACC--T-GCAGAGAGCTCTCCGACGTATTCGACGAACG-GAT-GCCAAACAAGATAG-G--CTG-TTCAGGATTGCC--TGCTGCAGCAGGCT------C-----TCATGGAATGG-TTTTGTTTGAACACT-ATAAGGCGATAGACGAGACAACTTCGATACCAATACTGA-GATAGATAATGAGG--AATGCTC--AGCAAGACA-TCCT-----GCCAGATCT-ACTTAC-AATTCG-CCCCAACGTGAG-AGGACGACAGAAGCTGgagcagctcatccctccaacgaaggcagctctggaggaacatgtaaagagggcagtgtatcaaggaaatgtgtgtagtcagatactgctaccaacaccaaatcgtcctccaccaaccaactggggttggtcaag
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CCATTTTAGAAGAATGTCAGTGTAATCTAGCTTCAGATGCTAGACCATATAGCATGTCAGTATTATACCTAAGACATTTACAGGACTAATTAAGCCATTCATTTTAAAGTATTGTGTTGAATCCAATTTTTGCCTAGATAATTTCCAAATACAATCACGTGACATACTGTGGTAGATAATATCAAGTTGAAATTGGTACCATTGGATTTCTTGCGCCCACCCCAACATATACATATTTAGATATTAAAATCAAGTCAATAGCAGCATTGTGTCAAGAGATAATAGCATTTGGATTTCAAGTTGCGGCCATTTTGAAATCCAATATGGCGGACTTACAGAGAGAATTTCAAGTGGCCCAATAACTGAAAATGTTCGTAACATATTAATGAATATTTGTGCCAAATTTGGTGCTTGCATACCGAATTGTACACTTCTTACAAATACCGGTATTTGGGCTAAGCCGCCCGACTAAAA
Unaligned ( gi|10 ): TGCGCTACAATGCCCCAATAAAGATACATTTAGATTCCGGAATAACTGCAATATATCCACAGATAATAGCAAATGTATATTTCAAGTAGCGGCCATTTTGAAATCCAATATGGTGGGCACTTAAAAAGAATTTCAAGAGGCGCAATATCTGAAAATGTTTGCAACATGTTAGTGTACATTTGTGCAAAATGTGGTGCTTGTATCACAAAATGCACAACAGGTTTGCTATGCTGCTCCGCTATTATAAC
Unaligned ( gi|11 ): TTGACAATACCAAGTGGTAATTGATAAAATTGGATTCTTGAACCCCTGAATCGAGTCAATATATGCATTATGCACACAGATGATAGCAAATGTAGATTTCATGTGGTTGCTATTATGAAATCCAATACAGTGGACATGTAGAATTTCAAGTGGCCCAATATTTGAAAATGTATATAATATT
Unaligned ( gi|13 ): GGCCCAATATCTGAAACATGATCGCATATTAATATACTCATTTGTACATATATTGGTGGCTGGCTAGTAGTTCACAGAAGTCATGCGCAATAGTTTGCTTATTGTCTGTTTTCGCTACTTAGTTAGAAT
Unaligned ( gi|15 ): TGGTTTCTTGCAAGAGCAAGAAAGGGTGTGAGGAGCTGCAAGTGCAAAAAGGCTGCCCTTCAATGCACAGCCCTCTGTGAATGTGAAGGGAACCGCACATGTTGATGAGCCAAGAACA
Unaligned ( gi|17 ): GCCATTTTGAAATCCAATATTGCGGACACATAGGGAAAATTTCAAGTGGCTCAATATCTGAAAAACATGTTAAAGTACATTTGTACCAAATTTGGTGCTTGTAT
Unaligned ( gi|19 ): AAAATGATCGTTTTCAACAGTATAGAGGTACATTTGTACCAAATTTGGGTGCTTGTATCACAAAATAGCGCATAATTTGCTAATGCTGTTTGCTATAT
Unaligned ( gi|22 ): CCTGTATCACAAATGCATAATTCTTTAGATTATTTGAGCTAACCCGCCCGC
Alignments
lowQualScore : 111111111111111111111111 1111111111111111111111111
lowQualScore : 111 1 222 1 222 111 1 1 1 2222 1 11 1 1 1 1 1 11 11 333333 22222 11 11 11 11 1 22222 1 2222222 11 1 11 1 1 11 1 1 444444444444444 111 222222 11 1 11 7777777777777777 1 1 1 55555 1 1 2222 1111 11 2222 1 33 1 11 222 1 1 1 111111111111111111111111 555555555555555555 11 22 7777777777777 77777777777777 1 1 1 1 11 222 22222 222222222 1 1 1 11 111 1 1 1 1 111 11 3333 11 11 1 1 1 1 11 222222222222 11 1 1 1 11 1 4444444 1 1 1 3333 1 222 1111 1 33333333 1 1 222 1 1 1 3333 11 222222222222222 1 11111 1 1 11 5555555555555 11 1 11 1111111111111111111111111 22 222222 1 1 1 1 1 1 1 2222222 1 222222 333 1 555555555555555 11 111111 11 444444444444 22222 111 33333333 111 111 22222 11 11 22222 1111 11111 11 22222 111 1 111 111 11 1 1 44444444444 222222 2222222 333333333 111 11 1111 2 1 1111 333333 111 111 11111111 111 1 111111111111 1111 1 11 77777777777777777777777 111 333333 111 111 111 333333333 111 1111 111 4444444444444444444444 2222222 111111 111 1 22222
lowQualScore : 1 999 5 111 1 5 333 999 3 3 3 7 3 8888 6 3 88 3 5 5 5 5 88 88 000000 66666 88 1 1 1 88 88 77 1 5 6 55555 6 3 5555555 44 0 6 6 5 77 5 5 88 0 5 222222222222222 111 8 333333 0 0 44 3 88 9999999999999999 7 7 3 3 6 3 11111 3 3 6 1111 7 2222 88 7777777 0000 3 7 33 3 11 88 333 0 0 3 3 6 3 000000000000000000000000 333333333333333333 44 00 7 3333333333333 6 88888888888888 3 3 1 6 3 3 88 1 333 7 44444 777777777 3 3 3 88 777 3 3 7 2 6 2 7 111 88 0 7 0000 88 1 6 22 2 8 33 1 0 0 555 0 0 66 4 111111111111 1 33 2 8 1 0 1 1 0 6 3 7 6 6 99 6 3 3333333 1 3 3 3 0000 0 6 7 7 0 3 1 333 7777 3 6 00000000 6 6 7 3 3 888 2 3 3 7 0000 6 6 55 6 555555555555555 7 0 6 88 2 6 99999 1 3 6 3 6 7 6 88 4444444444444 44 0 3 44 6 6666666666666666666666666 00 333333 0 0 0 2 11 3 8 0 0 0 0 2 1 8 8 0 5 0 8 1 6666666 8 6 0 0 333333 555 0 0 0 1 1 8 0 666666666666666 1 8 8 44 11 111111 8 8 8 11 8 8 8 333333333333 8 00000 444 8 33333333 8 0 8 444 3 222 00000 11 11 00000 5 5555 1 8 8 8 33333 33 1 2 55555 444 0 555 0 1 777 99999 33 3 6 0 3 0 1 77777777777 666666 8 3333333 111111111 111 11 8 1111 0 0 0 7777 1 000000 999 111 6 1 22222222 5 1 1 000 5 5 1 666666666666 6666 5 1 5 33 0 66666666666666666666666 1 77 5 000 0 111111 5 5 3 111 6 999 99 111 0 1 111 333333333 6 6 111 99 6 6 6 6 3 6 6 0 4444 99 6 111 9999999999999999999999 6 6 1111111 999999 111 2 6 55555
lowQualScore : . ... . ... . . ... ... . . . . . .... . . .. . . . . . .. .. ...... ..... .. . . . .. .. .. . . . ..... . . ....... .. . . . . .. . . .. . . ............... ... . ...... . . .. . .. ................ . . . . . . ..... . . . .... . .... .. ....... .... . . .. . .. .. ... . . . . . . ........................ .................. .. .. . ............. . .............. . . . . . . .. . ... . ..... ......... . . . .. ... . . . . . . . ... .. . . .... .. . . .. . . .. . . . ... . . .. . ............ . .. . . . . . . . . . . . . .. . . ....... . . . . .... . . . . . . . ... .... . . ........ . . . . . ... . . . . .... . . .. . ............... . . . .. . . ..... . . . . . . . .. ............. .. . . .. . ......................... .. ...... . . . . .. . . . . . . . . . . . . . . . ....... . . . . ...... ... . . . . . . . ............... . . . .. .. ...... . . . .. . . . ............ . ..... ... . ........ . . . ... . ... ..... .. .. ..... . .... . . . . ..... .. . . ..... ... . ... . . ... ..... .. . . . . . . ........... ...... . ....... ......... ... .. . .... . . . .... . ...... ... ... . . ........ . . . ... . . . ............ .... . . . .. . ....................... . .. . ... . ...... . . . ... . ... .. ... . . ... ......... . . ... .. . . . . . . . . .... .. . ... ...................... . . ....... ...... ... . . .....
lowQualScore : 0 000 5 555 0 0 333 777 7 3 3 3 3 3333 7 3 33 3 5 0 5 0 00 55 000000 55555 55 0 0 0 00 00 55 0 5 7 33333 7 3 7777777 00 7 7 7 0 55 0 5 00 0 0 888888888888888 222 0 000000 8 8 00 3 33 0000000000000000 3 3 3 3 7 3 77777 3 3 7 7777 3 3333 33 7777777 3333 3 3 33 3 77 33 333 7 7 3 3 7 3 000000000000000000000000 777777777777777777 00 77 3 3333333333333 7 33333333333333 3 3 0 7 3 3 33 0 333 3 77777 000000000 3 3 3 33 777 3 3 3 0 7 0 3 000 33 7 3 7777 33 0 7 00 5 8 88 0 0 0 888 0 0 55 2 000000000000 2 88 5 8 0 0 0 0 0 7 3 3 7 7 33 7 3 3333333 0 3 3 3 3333 7 7 3 3 7 3 0 333 7777 3 7 77777777 7 7 3 3 3 000 0 3 3 3 0000 7 7 77 7 000000000000000 3 7 7 33 0 7 00000 0 3 7 3 7 3 7 33 3333333333333 00 7 3 00 7 3333333333333333333333333 00 777777 0 8 2 5 00 2 8 0 0 0 0 5 0 0 0 8 0 6 0 4 0000000 0 0 8 8 000000 000 2 8 4 4 0 8 6 444444444444444 0 0 0 88 00 444444 0 0 0 00 0 0 0 000000000000 0 00000 000 0 22222222 0 8 0 000 8 444 00000 00 00 00000 0 4444 4 0 0 0 22222 88 0 0 00000 888 0 000 2 0 555 55555 22 2 5 0 2 6 0 66666666666 444444 0 0000000 222222222 666 00 0 6666 8 4 6 0000 0 000000 333 777 7 0 33333333 2 0 0 222 7 7 4 666666666666 1111 7 4 7 66 7 99999999999999999999999 0 99 7 000 7 333333 7 7 7 777 7 222 22 777 7 0 777 333333333 7 7 777 22 7 7 7 7 2 7 7 7 2222 22 7 777 8888888888888888888888 7 7 7777777 222222 777 5 0 00000
consensus : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ATCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTG-A-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACG-CAAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC---GAAAGGCTGTGGCCGACCCCATTCGC-CAGT-ACAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGC-GAC-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGT-CTATCTGCATTGTCTGATGGTG-------CTGCG----------AGTGATCTC-CTCACATACTTAGC-TGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT-A----G-GGCAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
Reference ( family-3946 ) : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ATCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTG-A-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACG-CAAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC---GAAAGGCTGTGGCCGACCCCATTCGC-CAGT-ACAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGC-GAC-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGT-CTATCTGCATTGTCTGATGGTG-------CTGCG----------AGTGATCTC-CTCACATACTTAGC-TGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT-A----G-GGCAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
gi|1 : CATTACACC--CATCAAGGGTGTTTTTTTTCGTCCTA-AGATGGCCTGATTAACACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTTCAATCGCTTCGGCAG-CGACTAAGATGA-GTTCATTTCCAATTTTCACAATA-AGG--AT--CGAT------TGT-----CTG--ATTAAATATATTACTGCA--CGGAAGGAAGGGTTTGTA--ACGGTT-TCTTAAACCAGCGACAAAA--TAGATGAATGCCTTGCAG-TTCTTG--C-GAACACCTCTGTCGAATTTGAGAA-TAGA--CTCAAAAAACAAAACATCACCCGATTTACGTCGAGATCTTACGATC-A--AAG-GCT-T---ATCTTATG-TAGCTAT------TAACTTGATTCTGGTGGTG-GTGGTA-GT--AGGGGTTGTGGTAAT-------------AACTGAGATGTTAACATTGCATCA-TGAG-ATGGTGGCAC-TGTGGA-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACTTGTGAAAGCCGATA-TTG--CAAAAGCAGGGGCA-GCAGACTCCTTCCTGAGGGCATCTCGTGT-CTTGCGCACAAGAAGAGCAAA--TC---AAGTGACTGTAGCAGCATTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCA---CT-----------------AATGTCTGAA------AGAAA-------CCAGGAATG-CAGAGGA---CATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATCG-TTAATTATGTACCTC-GATGCTC-TG--ACGATGCT---GGTTCCAC--GT-GCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTGAA-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAAT-TAAGATAAGGCTACTTCA--CCATCAGAAAAC---ACAGAG--GGTGTTCTCTTCAATCCCAATTGACCAGGCACA--AGCAG-AA-CAATAGCTGCATCAAA-GGAGA-CGG-TGGAGCAGTTG-GGCTCACTGACAATCCTA--GTGCCTTACGTCGCAGG-AAGGTTCT-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCT-TCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TACGTCATTA-TGATCAG-ACGCCAAGTGT-AT-AGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCATAGAGGAGATGGGC-AACCCGTTCGAGGAGGGGAATCAGGAT---GTAGCCAAA-C-TGGA-AACAAGGGAGATCGCAG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-ATCATGGCCAAGAGCAGTTCAAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC----AAAGGCTGTGGTCGACCCCATTC-C-TCGTAACAA---GCTGAAGGTGTTCAGCACTTCCACTCCAAGGTTCCAGAACAAAGGTCAGCAAAT-GCTCGTCTCCGTCAAGAACGAC-CGTGAACTCTTCGCACGCAT-GTACACT-GTCTGCCAGACGAGAGA--TGGAA------AC-----CTTTCGTCA-TGAAAATCAGGCATGT-CTATCTGCATTGTCTGATGGTA-------T--CG----------AGTGATCTC-CTCACATGCTTAGCTTGGAA-GTTTCCGACGCAAGTACAGAAACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTAGATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-GTACACTTGCAAAGCAGAGACAAGGCTTGCGAAGATTTTTGGTGGCTGCCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAGCT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAG--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATAG-TTT-----CA---CC-AGGA-G-----GACAA-ACAACT-TG---TCATTACTGACGA-CGA-----AGG--AGTGCTC--AGCAAGCCACTACTGCCAGGCCAGATCTGACT--C-CACTCG-TCCC-ATTT-AA-CCGACTAAAGAAGCTGAAGCATTCAGAT-A---TGCTGTCAAT-GCAATCTTCAAACAG---CCCAGAACAGACACCATGC-AAATA-TCACTACGGG-CTATAGACACATCGATC--CGATGT-TAAG-G-CTGG--C----AGTC---GTG--CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTC---GCATGGG--ATT---CCGA-ACAGTC-C-GAGT-TTTTCGATAACTAGGGGCAG--ATTG-AATAGCAACTGGATGGGAACAA-GAGAAGGCTCATGCCAT------TG----CAATGTTTA-CACACTCTCA-CGTGAA-TATC-GACACTGTGTCTAGTTTTTCC-ACTGT--CGTAGT---TTTGCTAGACG--TGGCCAGAAGAACTG---CGC-A----GTGGCAGT-CT-GA---C-GGTACTGTC-CAG--AATT---CACAGTCTAAGC---------GCT-GCTGCTGC-TGTCCT---CTGC--ACC-GC-ATG-AT-A-AT-CAGAACGACGCAATG----CGCA--TCA-T---CGAAAGG------GTG--CCGTTTG----ATCGAACT-AGGCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAAATCTTCCGCAATTAAAGAAAGAACAAT
gi|12 : aGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAa
gi|14 : A-AATAGCAGCTGGATTGGGATGA-GAGATGACTCATG-CAC------TA---CCAATGTTC--CACGCTCTCT-C-TGGA-GGT--GACACTGTGTCTAG--------------------T---TTTGCTTCACG--TGGCAAGAAG-ACTG---CAT------G-GGTAAT-CTAAA---C-
gi|16 : GCAGCTGGATTGGGATGA-GAGAAGGCTCATA-CAC------TA---CCAATGCGC--CACACTCTCT-C-TGGA-TGT--GACACTGTGCCTAGTTTT----ACT-T--C----------------ATG--TGGCAAGAAG-ACTG---CAT------G-GGCAAT-CT
gi|18 : ATTGAACAGG---A--ATCGGTGA-TAATGGCTGCATCAAA-GGAAA-CGA-TGGAGCAGTCG-GTCTCGCTGACAAACCTA--GTGCCTGACGTCGCTGG-ATGGTTGC-TGGACaaa
gi|2 : CATTAAACGAGCATCA-GAGTGTTTTT---CGGTCTACAGATG---TGATTA-CACAGCGGTCCAAACGGGACATTCTGGGGTGTTAGTGGGTGCGAGATTCCGACCGGGGTTGTTGATTTTC--ATTGGATTGGCAGTCGGACAAGATGAAGTTCATTTC-AATTT-CACAATAGAGGGAATAACGATGTTAAATGTAGTAGTTGTAATGATATAAATTACTGCAGTCGGAAGGA--GGTCTGTACGAGGGTTATATTTAAACAG-GGCAAAA--AG--TGAATGG-TTGAAG-TTAT-GTGCAGAACAC-TCTGTCGAAATT-AGAAGTAGAGGCT-GAAAAACAAA-CATC--CCGATTTACGTCGAGATTT-ACGATTTA--AAGAGCT-TGAGATTTTATGGTAGGTGTGAATGTTGAATTGAT-ATGG--GTGAGTGGTGAGTGAAGGGTTTGTGGTA--T-----AGTG-TAGACTGAG--TTTAACATTGT--CAATGAGGATGGTGG-ACGTGTGGGAT---GCTGTCAAG-AGGGTGTGCTTTGAGTGAAAGCA-GTGTGA--GCCGATAATTGGAC-AAAGCAGGGGCAAGCAGACTCCT-CTTG--AGCATCTCGTGGATTTGCGCACATAGAGAGAAAAATTCGGAAAGTGACTGTAATGGCATTGTACATGCTTGCAAGCAC-GTGACCTACAGT--ATA---------------------TGTCTGAA------AGAAC-------ACAGGAATGACAGGAGA-ATCATCCTGAGTTTGAAGACT-------------GGAA-TAGAACTGTTGG--------------TGTACTTGCTAGGCAAGGATAGGTTAATAGT-CACGTCAGATGCTTGTGAAGAGTTGGCTGGGGTTCCACTG---CAACGGACTGGATCACATGTAGA--GT---AGATTAGAGTATCAGATAGAAACCTG-A-GGACATGGTGGTAACTGAGCC--CAAACACC-AGATGTATC-AGGAAATATAAGATAAAG--GCTTAATCCCATCAGAAA-C----CAGAG--GGTGATTTCTTAAATCC-AATTGAGGAGGCA-A--GCTAG-AACTAATGG----ATCAAAAGGAGAGCGGGTGGAGCGGTTGTAACTTG--AACAATCCTAAGGTGC-TTACGT-GCAGGGAAGGTTTCTGGGAC-AGAAGTGTGTCATGCAGGGTACTCGAA-AATCTTTCAGGTTGGAAAC-AACAATGGGAGAATGCAAACA-------TTAGTCCATACTGATCAGTACG-CAAGTGTGATTAGGATACATTTACGAAAGAAGTTTGCT-TGTCG-CGA-GTTGTATAGGGGATGGGCCAACCGGATCGAGAGAAGGAATCAGGATTGAATAGCCAAGACGTGGAGAACAAGGGAGATCG-AGTGATTCTGCTGACGTTATGA-TGTCGAAGAGGTAT--TGGCCAAGAGCAGTTC-AGGCTTTCCACCCAGAGAATGTCTGT-GGCCAGAAA---GAAAGGCTGTGG---ACCC-ATTAGCTCAGT--CAAAACGC-GAAGGTGTTCAAAA-TTACACTCC-TGGTTACAGA-AAAAGGT-AGC-AAT-GATAGTATCCGTCAGAGACGATACGTGAACTCTTCGCACG-ATAGTACACTGGTCTGCCA-ACGAGAGAGGTGGAA------ACG----CTTTCGTCAATGAAAATCAGGCATGT-CTATC-G-ATTGTCTGATG-----------TATG----------AGTGATCTCGCTCACATACTTAG--TGGAA-GTTCTCGACG-AACGTTAGAAACTCATGTC--GA--TGTA-TT-TGCTATGGATGGAG-AGC-ATCGTCCAGTTGCTGAAGCCGG-TGTGATGTAAAAACTGT-GAAGAGTAAGGA-AAACATGGTCAT-ACTGAATATA-------TGTGCCACGAAGCTGCAAA-AGTGAC-TACATGA-TCGGGTCTGGATAGTTAGTAGTTACTTTGCTGATTCACTGAAATGCAGT---ACACTTGCAAAGCAGAGACAAGGCTTGCGGAGATTTTTGGTGGCTACCGCAGCCAAACCAAG--AAACTGGTAGCAGGAAACTGGTAGAACT-TCCTACGAGTG-GAAAGCTA--CAAGACCGAA--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGAAATAT-TTT-----GA---CC-AGGAGG------ACAA-ACAACT-TG---TCATTACGGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATAT-TA-CCA--TAAAGAAGCTGA--CATTCAGATAT---TGCTG--CAT-GC--ATCTCAAACAG---CCCAGAACAGACACCATGC-AA-TATTCA-TCTGGG-CTATAGACATGCA---C--CGATGT-TAA--G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAA-CCAGAAA-GAC----AAACTG---GC-TGGG--ATT---CGGA-ACAGTC-CCGAG--TTTTCGATAACTAGGGGCAG--ATGA-AATAGCAACTGGATTGGGACAA-GAGAAGGATCATG-CAT------TG---CCAATGTTATACACACTCTCA-C-TGAA-TAC--GACACTGTGTCTAGTTTT--CCACTGTGTC----TAGTTTTGCTAGACG--TGGCAAGAAG-ACTG---CGC-A----G-GGCAGT-CTGGA---C-GGTACTG-C-CAG--AATT---CACAG---AAGC---------GTT-GCTGCTGC-AGTCCT---CTGC--ACC-GC-ATG-AC-ATAA-CAG-ACGACGCAATG----CGCA--TCA-T---CGAAAGG-T---T-CGAT-----TG----ATCGAACT-A-GCAA-------ATGCAC------A-----CA----CAAGGCCAGGAGGAAAATCTT-CG
gi|20 : G---TGAT---CACTGCG-TCCAA-CGGAACACTT-GGGGTATTAGTGA-TGCA----CC-GACCGGG-ATGTTGAATTGC--ACCGCTTCAGCAG-CGGACAAGAT
gi|21 : tgTCCTAAACGAACGGCAAAAGAAGAATGTATGCCTTACAGTTTCT-G--CA-AACACC-CCGCC-AGTTTGA
gi|3 : ttATG-TAGCTAT------TGGCTTGATTTTGGTGGTGA-TGGTG-GT--AGCGGTAGTGATAGTTTTAATGGTGACA-ACAGAAATTTTAACATTGTATTA-TGAT-ATAGTGGCAC-TGGGGGTAAGGGATG-CAAGTAG--TG-G--TTGGATG----CACGC-TGA--G------ATTA--CGACTGCATGGACA-GCAGACTCGTTCTTGCGAGCATCCCTTGT-CTTGCACACGCGAAGAACACA--TC---CAGTGACTGCAGCAGCGCTCTAAAT-CCTGCAA-CACCGTG-CCTACAAACAATACTGTCTGGGAGAAACGAGGAATGTTTGAATTTTGAAGACTGGTGTTGCCAGAAAGGA--GAGGATATCCGCC--AGTTTCATTACTAGGCAACCGTGCGGGAACAAAAACTGTTGGCTCAAATGTATGTGTGTTCGCTC-AATTAGGAGTAG-TTAATGGTGTTCCTT-GTTGCTC-TG--GAGGTGCC---GGT-CCACTGGTTCCACGCACTGGATCACATCCA--TTATGCTAGGT-GGA-TACTAG-TGCA--TCAG-ACGGACATGGCCA-ACCTC-TCCACCAAACACCTAGATATATCCAGGAAAAGAAAGG-AAGGCCACTTCA--CCGTTAAAAAACCCCACAGAGATGGTGTTTTCTTTAATCCCGATTGACAAGACACATGAACAG-AA-TAATGACGACATCAAG-GGAGA-CG--------------------------ACCCTA--GTGCCCTACGTGGTCGG-ATAATTGC-GGGACCAGAAAT-TGCTA----GAGTAATCGAAGAAT-TC-CAAGATGAGAACCAACACTAG-AGACGGCAAACAGCAGACATAGGTCATTA-TGATCAG-AAA-CAAGTGTA--CAGGCCTCATTTGTGAAAGATGTATGCTCTCTCGTCGGTATCATAGAGAATATTGGA-AACTCACTCAAGGAGGTGAGTCAAGAT---GTAGTAAAC-C-TGGA-CACAAAG---------------CTG-TGA-----TGAATGCC-AAGAGA-AT-A-GGATAAGAGCAGTTCGAGGATCTC-AAC-AGAGAGTGTCTGTTGGACAGAACAAGGAAA---T-TGGCTGACCCCATTCAC-CAAG-ACAG---GCTGATGGCATTCAGCCCTTCCACTCCAGGGAGCAAGAGAAAAGGTCAGT-GACAGGTCACCGCCGTCAAAAATAAT-TTTGATCTCTTTGTACGCAT-GTACATTGG-CTGCAAGATGAGATA--TGAAATTCTTGACGAGTTCTTCCGTCA-CGAGAATCAGGCGTGTTCTCT-TGCATTGTGTTATGGTGGAAGCCTCTGCACTGATACCAAAGTGATCTC----ACATAC----C-TGGAATATGTATAACGCAAAAACAGAGACTTCTGTCACAACCTGTA-TTGTGCT-TG-ATGGATCAGCCATTGTCCAGATGCTAAAGATAACTGC-AT-TAAAGGCCTTTGAAGAGTATGCACAA-CA-GATCGTCACCCCGTATACCAGGTATAT-GCGCGAAGCTGTAAACAGTATCACTCCTGAATCTGGTCTGGA------ATACTTACCTCGCTGATTTACTGAAATGCAGT---ACATATGCAAAGCGGAG--------TGCGAAGATGTGTGATGGCTGCTGC-------------------------AGGAAACTGACATAACT-TCCTAAGAATG-GACGGCTT--AAAAAC--AG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CTAATTGCCAGTTATCAGGGAATGA-TTT-----GA---CT-AGGA---------CAA-GCAACT-CG---CGATTGCTGATGG-AGA-----GGC--AGTTCTC--AGCAAACAACTACT-----GCCAGATCTTACC--T-TATTCGCCCCC-ATGT-AA-TCA--TAAAAAAGCTGA--CAGTCAAATGC---TGCTG--AAT-GT--TTCTCACGCAG---CCCAACATTCACACCGTTC--AATACTCA-TCT-AGACTCTAGACA-------C--TAATGT-T-GT-G-CTGG--A----AGT----AT---CCCTA--GCA--CA-GGA--TATGC-AACCAGAAGAAAA----AATATG---AC-TGGC--ATT---CGGA-ACAGT--T-AAGAGTTTCCAATACCTAATAGCAC--ATGA-AATAGCACCT
gi|4 : aGAA-GTCTCCGACGCAAAGACAGAGAATCCTTTCACGAACTGTAATT-TGCT-TG-ATGGAGCAGCCATTGTCCAGGTGCTGAAGCCAGCTTC-AT-CAAAGACCTTTGAAGAGTATTCACAA-CA-GGTCGTCATTCCATATA-------TGT-CCACGAAACTGCGAATAGTGACACACCTAGATCTGATCTGGG------ATACTTACCTTCCTGATTCACTGAAAGGTAGTAG-ACAGTCACAGAG--GGGACAAGGCGTGCTGAGACGTGTGGTGGCTGCCGCTGCCAAACCA----------------GGAAACTGGCAGACCT-TGCTACCGATGTGACAGCAA--CAAGACTGAAACCTGGTTCAGG-TT-CCCTT-CT-CAGCAG-CT------------TCATGGAATGGCTTT-----GA---CCCAGGGGA-----GACAA-ACA-CT-CG---TCATTTCTTATG---GA-----ATGCCAGTGCTCCCAGCAAGCCACAACT-----GCCAGAT-TGACT--TACAATTG-TCC--ATGT-AAACCCACCGAAAAAGCTGA--CAATTGGATGGGGTTGCTG--CATTGC--CTATTACACAAGTTCCCAG--TGTACACCATGCCAAATACTTA-TCCGGGACCTTGGACAC------C---GATGTCTGGCTG-CTGG--CCCCCAGT----GT---CCCTT--GCATCCA-GGA--GTTGCAA-TCATGTAAGAC----AACCTG----TGTTACTAATT---TGGA-ACAGGC-T-AGAA-TTTCAGATACCTAGCAGCAA--ATGA-AATAGCAGCTGGATTTGGACGA-TAGAAGGCTCATG-CAC------TA---CCAATGTTT--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAATT------A-----------------TGCGAGAAG--TGGCAAGAAG-ACTA---CAT------G-GACAAA-CTGGA---C-GGTACTG-C-AAT--AACT---CACTG---AGGCGCTGCTGCTGCT-GCTGCTGC-TGTCAT---TTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGATGCAATG----TGCA--TCA-T---CGAGAGG-TC--CGTGATCCTTTTATATGATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATATT-CGC-----AAGGAAGAACAATt
gi|4 : tgcttggaaTTGAAATCT-AC-ATTTGCTGATATCTCTG-GATATAATG-TAGCTAT------TGACTTGATTCTGGTgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagataccagaatcaagtcaatagctacattatatccagagatatcagcaaatgtagatttcaagtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : tgcttggaagaagtctccgacgcaaagacagagaatcctttcacgaactgtaatttgcttgatggagcagccattgtccaggtgctgaagccagcttcatcaaagacctttgaagagtattcacaacaggtcgtcattccatatatgtccacgaaactgcgaatagtgacacacctagatctgatctgggatacttaccttcctgattcactgaaaggtagtagacagtcacagaggggacaaggcgtgctgagacgtgtggtggctgccgctgccaaaccaggaaactggcagaccttgctaccgatgtgacagcaacaagactgaaacctggttcaggttcccttctcagcagcttcatggaatggctttgacccaggggagacaaacactcgtcatttcttatggaatgccagtgctcccagcaagccacaactgccagattgacttacaattgtccatgtaaacccaccgaaaaagctgacaattggatggggttgctgcattgcctattacacaagttcccagtgtacaccatgccaaatacttatccgggaccttggacaccgatgtctggctgctggcccccagtgtcccttgcatccaggagttgcaatcatgtaagacaacctgtgttactaatttggaacaggctagaatttcagatacctagcagcaaatgaaatagcagctggatttggacgatagaaggctcatgcactaccaatgtttcacgctctcactggatgtgacactgcgtctaattatgcgagaagtggcaagaagactacatggacaaactggacggtactgcaataactcactgaggcgctgctgctgctgctgctgctgtcatttgcaccgcgtgacataccagacgatgcaatgtgcatcatcgagaggtccgtgatccttttatatgatcgaaccagcaaatgcacagacattgacaaggccaggaggaaaatattcgcaaggaagaacaatgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagatAG--AACT---CACCG---AGGC---------GCT-GCTGCTGC-TGTCAT---TTGC--ACC-CT-GCG-AC-ATAC-CAG-ACAATGCAATG----CGCA--TCA-T---TCAGAG-----------------------ATCGAAAC-A-GCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAGAgtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : TTGAAATCT-AC-ATTT-------GCT----GAT---ATG-TAGCTAT------TGACTTGATTCTGGTacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacataccagaatcaagtcaatagctacatatcagcaaatgtagatttcaagt
gi|6 : agaactcaccgaggcgctgctgctgctgtcatttgcaccctgcgacataccagacaatgcaatgcgcatcattcagagatcgaaacagcaaatgcacagacattaacaaggccaggaggaagaacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacatCCAGGACTGTAGACAC------CAATGCTGT-AGGT-GACTGGTGC----AGTTCGTGTTCGCCATGCATCA--TATGGAGTATTGCAA-CGAGAAA-GACTAGAGAACTGTGAGTATGGACTATTGCATGAAGACAGACGC-CAGA-ATTCT-ATAACTGGTAGCAGCCATGAGAATAGCAGCTGGATTGGGACGACAAGAAGGG-CATGGTACAGCGGATAGACTCAAAGT-C--AATGTCTTCAACGTGGAATGTCCACCACT-CGT-TAGTCAA--C-A-TGT--A----T---ATTGCTAGGAGAGTGGCAG--AC-ATTATCTCATTA----C-GACAATGCTAGAAGACAGGTACTG-TACAATTAACTTCGCGTGA---AGGCA--------GCTAGCTGC-GCATGTCATGACTTGCCAGCCAGCAGTGGACTAGACACAG-ACGATGCA-TGAGCACGCAATTCAGTGGGCGAGAGG-TGGTCGTGATCCTTTTGTAT-ATCGAACCGA-GCAAGAATAAGATGTAC------AGAGATCATTGACG----CAGGGAGAAAATCTTGGGC-----AAGGAAGAgt
gi|7 : cagcattaggcaTGGC--ATT---TGGA-GCAGGC-C-AGAA-TTTCCTATACCTAGCAGCAC--ATGA-AATAGCAGCTGGNNNNNNNNNN-NNNNNNNNNNNNN-NNN------NN---NNNNNNNNN--NNNNNNNNNN-N-NNNN-NNN--NNNNNNNNNNNNNNNNNN--N-NNNNN--N----N---NNNNNNNNNNN--NNNNNNNNNN-NNNN---NNN-NNNNGG-GACAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCTG---AGGC---------ACT-GCTGCTGC-TGTCAT---CTGC--ACC-AC-GTG-AC-ATAC-CAG-ACGATGCAATG----CGCA--TCA-T---CGAGAGGTT---CGTGATCCTTTTGTATAATCGAACC-A-GCAA-------ATACATGTACAGAGA---CATTGACAAG----GGAAGAAAATCTT-CGC-----AAGGAAGAACAATcgaatgagtgcatcgctcatccctccaaacgaaggcagcgtcgttggcggaacatgtaaagagcggcaggtgtatcaagaaatggtgtgtgagcagatactgggatcccaacacacaaatcgtccgccaacaaccaactggggttggtcaaggacgtgaaggacagtacacaccttactggaccgctaccctgattgcagctcacagcgatatgagcatggttttcatgtgcaaaagcagaacagggtagtgggacg
gi|9 : tggtCACAAGGCAGTGACGAGAC--ACGTCGATGTAT-----CTGCCGATGCCACAC--AGTAAAACC--T-GCAGAGAGCTCTCCGACGTATTCGACGAACG-GAT-GCCAAACAAGATAG-G--CTG-TTCAGGATTGCC--TGCTGCAGCAGGCT------C-----TCATGGAATGG-TTTTGTTTGAACACT-ATAAGGCGATAGACGAGACAACTTCGATACCAATACTGA-GATAGATAATGAGG--AATGCTC--AGCAAGACA-TCCT-----GCCAGATCT-ACTTAC-AATTCG-CCCCAACGTGAG-AGGACGACAGAAGCTGgagcagctcatccctccaacgaaggcagctctggaggaacatgtaaagagggcagtgtatcaaggaaatgtgtgtagtcagatactgctaccaacaccaaatcgtcctccaccaaccaactggggttggtcaag
blockSeqs : A GAG . . G C . TA A G A T G AGAT C G . T A . . G GA AA GTTAAA AGTAG TA G T A GT . CG G A C GAAGA C T GTGCAG T G G G GG . . . . G TGCTGATATCTCTG TTT G GAATGT AG A GA GTTTTAATGGTGACA A A A G C G TAAGG T T G TGCT A GTG . CCGATAA GAC A T CG A AT AT GGA G G C A CAATACTGTCTGGGAGAAACGAGG TTTTGAAGACTGGTGTTG AC TA T AGGCAACCGTGCG C CTCAAATGTATGTG T G A G A G AA T TGG T TGGTT TTATGCT T G A AA AC T A A T C A T CCA TC A CCCA AT A C AC C C TG T T C CTG A G GG A CGGTCTCGCTG A AG C C T G T G T C G T G C TT C G GCAGACA A C T . GATT C T T C A TGA GACG G G AGTGATT C C A G T T G C C T AAGG G G CT C GCTCAGTCAAAAC T C AG G C GACA A A C A G T G GG TTCTTGACGAGTT AT T C C GTGGAAGCCTCTGCACTGATACCAA GC TTAG T C CG A C A G A G C T G G G A T T CCAGGTA G C TAGTTA AG T G T A CAAGAAACTGGTA A A T AA AA TGAAAC G A G CT G G G AATTGCCAGTTA C TGTTT ACA C GGCGATAG G T ATA T ATA TAATG CC CC . G TAC C C A G ACCCA . T A GGGGT C T A A GTT AACAG CA A T . G A A TGCACC CTGGCT A CCCCC TCGTGTTCG CAT TC T GTAT A A TAGA A TGAGTA CTA GCA G T TAAGAG G A G GCC G C G AGCGGATAGACT TATA A G A CC TTCCACTGTGTCTAGTT C AG . TCT NNNNG . G A AGA A TA TT TCG A . GCTGCTGCT A A GAC CA A A G T T A . AGCA AT G GGG TGGTCGTGATCCTTTTGTAT G . GAATAAG GTACAG GAT G G .
blockSeqs : . . T . . . . . . . . . . AG . . GCA C . . . . TAAAGAGCTTGA ATA . . A . . TAGTGTAG . . . . . . AT . . . G . CGC . A CG . . . . GC . . . . . . ATA AGAAC A A . . . . . . G . . . . G . . TG GAGT . . . . A . . . . . G . G . . . . T . GG C . . C . . CGA . . A G TGTAACTTGA T . C G A . A T . . . . . . C . . . G . . . AC . . . . C . CC . . . . . . . . A . . . . G . . . . ACCAAGACAG . . T . . AAT G . . . G . . . ACG C . T . TATG . C . C AA A A . . . . C T . . C A . A . . T . . G A G T AGTAAAACCT A . . CG . CGAA . . . . . . . C . . . . GAG . . . T AA . . . . T TA T . . . AGGA . G A AT A . T C . CATTC A A C . G A C CCAAT AGGT . TGC GT T . . AA . A . T GC ACT . . T GCCAGA A C T G . . . TAC TC . . . . NNNNNNNNNNN T . . . TA . . G . . C . . T . A . . . . . . . . T . . . . . . TCCGTGATCCTTTTATATG . . . . . G . .
blockSeqs : . . TGCT . . . CA . . . A . . . . . . . . C . . . C . T G . . . AG . . . . . . . A . . C . . C . . . . . . G G T CA C . . CA . AGG . . . . . . . C . . . . GG . . . T GA . . . . G C A . . . CCA . A G GC C . C C . TGT . . C . A A T CT TAA . C AT G . . TA . . . C AC G . . G CCGAG G C C C . . . TAC GC . . . . AACATGTATA C . . . A . . G . . C . . C . . . . . . . . . . T . . . . . . TTCGTGATCCTTTTGTATA . . . . . G . .
blockSeqs : . . G . . . . . C . . . . . T A . . C . . T . AG . . . . . . . . . . . . . . . . . . . . . . . T T . . . TCA . . G CC TGT . A GT G . . GT . . . A TG C . . A TAGAA T A T A . . . TGC TT . . . . TTACTTC A . . . . . . A . . C . . G . . . . . . . . . . G . . . . . . TTCGATTG . . . . . . .
blockSeqs : C . . G CAGAA . C C C . . . TAC NN . . . . TT A . . . . . . G . . . . T . . . . . . . . . . T . . . . . . . . . . . . .
blockSeqs : . . . NNN C . . . . A N . . . . . .
blockSeqCons : C************** GAG*** GG****** ***** ANCA* CC********* TGT*** GT******* NC**** TAC********* TC** ** ****** C** *** TTCGTGATCCTTTTGTATG***
originalCons : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ATCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTG-A-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACG-CAAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC---GAAAGGCTGTGGCCGACCCCATTCGC-CAGT-ACAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGC-GAC-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGT-CTATCTGCATTGTCTGATGGTG-------CTGCG----------AGTGATCTC-CTCACATACTTAGC-TGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAG--AAACCGGTAGCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GA---CC-AGGAGG-----GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AA-CCGACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACAC------C--CGATGT-TGGC-G-CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTG---GCGTGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT-A----G-GGCAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGG-T---CGTGATCCTTTTGTAT-ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
finalCons : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ATCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTG-A-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACG-CAAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC---GAAAGGCTGTGGCCGACCCCATTCGC-CAGT-ACAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGC-GAC-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGT-CTATCTGCATTGTCTGATGGTG-------CTGCG----------AGTGATCTC-CTCACATACTTAGC-TGGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACC--------------GCAGGAAACTGGCAGANCT-TCCTACGAATG-GANAGCTA--CAAGACGAG---CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GA---CC-AGGAGG------ACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AAANCA-CTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACACC---------GATGTTGT---G-CTGG--C----AGTGT-------CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTGNC----TGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AATAGCAGCTGGATTGGGACGA-GAGAAGGCTCATG-CACTAC---------CAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-ACTG---CGT------G-GGCAAT-CTGGA---C-GGTACTGC--CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGGTTCGTGATCCTTTTGTATG---ATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CCATTTTAGAAGAATGTCAGTGTAATCTAGCTTCAGATGCTAGACCATATAGCATGTCAGTATTATACCTAAGACATTTACAGGACTAATTAAGCCATTCATTTTAAAGTATTGTGTTGAATCCAATTTTTGCCTAGATAATTTCCAAATACAATCACGTGACATACTGTGGTAGATAATATCAAGTTGAAATTGGTACCATTGGATTTCTTGCGCCCACCCCAACATATACATATTTAGATATTAAAATCAAGTCAATAGCAGCATTGTGTCAAGAGATAATAGCATTTGGATTTCAAGTTGCGGCCATTTTGAAATCCAATATGGCGGACTTACAGAGAGAATTTCAAGTGGCCCAATAACTGAAAATGTTCGTAACATATTAATGAATATTTGTGCCAAATTTGGTGCTTGCATACCGAATTGTACACTTCTTACAAATACCGGTATTTGGGCTAAGCCGCCCGACTAAAA
Unaligned ( gi|10 ): TGCGCTACAATGCCCCAATAAAGATACATTTAGATTCCGGAATAACTGCAATATATCCACAGATAATAGCAAATGTATATTTCAAGTAGCGGCCATTTTGAAATCCAATATGGTGGGCACTTAAAAAGAATTTCAAGAGGCGCAATATCTGAAAATGTTTGCAACATGTTAGTGTACATTTGTGCAAAATGTGGTGCTTGTATCACAAAATGCACAACAGGTTTGCTATGCTGCTCCGCTATTATAAC
Unaligned ( gi|11 ): TTGACAATACCAAGTGGTAATTGATAAAATTGGATTCTTGAACCCCTGAATCGAGTCAATATATGCATTATGCACACAGATGATAGCAAATGTAGATTTCATGTGGTTGCTATTATGAAATCCAATACAGTGGACATGTAGAATTTCAAGTGGCCCAATATTTGAAAATGTATATAATATT
Unaligned ( gi|13 ): GGCCCAATATCTGAAACATGATCGCATATTAATATACTCATTTGTACATATATTGGTGGCTGGCTAGTAGTTCACAGAAGTCATGCGCAATAGTTTGCTTATTGTCTGTTTTCGCTACTTAGTTAGAAT
Unaligned ( gi|15 ): TGGTTTCTTGCAAGAGCAAGAAAGGGTGTGAGGAGCTGCAAGTGCAAAAAGGCTGCCCTTCAATGCACAGCCCTCTGTGAATGTGAAGGGAACCGCACATGTTGATGAGCCAAGAACA
Unaligned ( gi|17 ): GCCATTTTGAAATCCAATATTGCGGACACATAGGGAAAATTTCAAGTGGCTCAATATCTGAAAAACATGTTAAAGTACATTTGTACCAAATTTGGTGCTTGTAT
Unaligned ( gi|19 ): AAAATGATCGTTTTCAACAGTATAGAGGTACATTTGTACCAAATTTGGGTGCTTGTATCACAAAATAGCGCATAATTTGCTAATGCTGTTTGCTATAT
Unaligned ( gi|22 ): CCTGTATCACAAATGCATAATTCTTTAGATTATTTGAGCTAACCCGCCCGC
Alignments
lowQualScore : 111111111111111111111111 1111111111111111111111111
lowQualScore : 111 1 222 1 222 111 1 1 1 2222 1 11 1 1 1 1 1 11 11 333333 22222 11 11 11 11 1 22222 1 2222222 11 1 11 1 1 11 1 1 444444444444444 111 222222 11 1 11 7777777777777777 1 1 1 55555 1 1 2222 1111 11 2222 1 33 1 11 222 1 1 1 111111111111111111111111 555555555555555555 11 22 7777777777777 77777777777777 1 1 1 1 11 222 22222 222222222 1 1 1 11 2 1 1 1 1 111 11 3333 11 11 1 1 1 1 11 222222222222 11 1 1 1 11 1 4444444 1 1 1 3333 1 222 1111 1 33333333 1 1 222 1 1 1 3333 11 2222222222222 1 222 1 1 11 11 5555555555555 11 1 11 1111111111111111111111111 22 1111111 1 1 1 1 1 1 1 2222222 1 222222 333 1 99999999999999 11111 22222222 11 222222 11 444444444444 22222 2222222222222 111 111 22222 11 11 22222 1111 222222222 11 22222 111 1 111 111 11 1 1 4444444 333333333333 2222222 333333333 111 11 1111 2 1 1111 3333333333 111 111 11111111 111 111 1 111111111111 1111 1 11 77777777777777777777777 2222222 11111 111 111 111 333333333 111 1111 111 3333333333333333333 2222222 111111 111 1 22222
lowQualScore : 1 999 5 111 1 5 333 999 3 3 3 7 3 8888 6 3 88 3 5 5 5 5 88 88 000000 66666 88 1 1 1 88 88 77 1 5 6 55555 6 3 5555555 44 0 6 6 5 77 5 5 88 0 5 222222222222222 111 8 333333 0 0 44 3 88 9999999999999999 7 7 3 3 6 3 11111 3 3 6 1111 7 2222 88 7777777 0000 3 7 33 3 11 88 333 0 0 3 3 6 3 000000000000000000000000 333333333333333333 44 00 7 3333333333333 6 88888888888888 3 3 1 6 3 3 88 1 333 7 44444 777777777 3 3 3 88 6 3 3 7 2 6 2 7 111 88 0 7 0000 88 1 6 22 2 8 33 1 0 0 555 0 0 66 4 111111111111 1 33 2 8 1 0 1 1 0 6 3 7 6 6 99 6 3 3333333 1 3 3 3 0000 0 6 7 7 0 3 1 333 7777 3 6 00000000 6 6 7 3 3 888 2 3 3 7 0000 6 6 55 6 3 6666666666666 7 0 6 88 2 6 0 777 1 3 6 3 44 6 88 4444444444444 44 0 3 44 6 6666666666666666666666666 00 4444444 0 0 0 2 11 3 8 0 0 0 0 2 1 8 8 0 5 0 8 1 6666666 8 6 0 0 333333 555 0 0 0 1 1 8 0 00000000000000 88888 99999999 8 44 11 888888 8 8 8 11 8 8 8 333333333333 8 00000 8 3333333333333 8 0 8 444 3 222 00000 11 11 00000 5 5555 1 8 8 333333333 33 1 2 55555 444 0 555 0 1 777 99999 33 3 6 0 3 0 1 3333333 8 444444444444 3333333 111111111 111 11 8 1111 0 0 0 7777 1 6 0000000000 000 111 6 1 22222222 5 1 1 000 5 000 5 5 1 666666666666 6666 5 1 5 33 0 66666666666666666666666 1 77 4444444 33333 5 5 3 111 6 999 99 111 0 1 111 333333333 6 6 111 99 6 6 6 6 3 6 6 0 4444 99 6 111 0000000000000000000 1 6 6 1111111 999999 111 2 6 55555
lowQualScore : . ... . ... . . ... ... . . . . . .... . . .. . . . . . .. .. ...... ..... .. . . . .. .. .. . . . ..... . . ....... .. . . . . .. . . .. . . ............... ... . ...... . . .. . .. ................ . . . . . . ..... . . . .... . .... .. ....... .... . . .. . .. .. ... . . . . . . ........................ .................. .. .. . ............. . .............. . . . . . . .. . ... . ..... ......... . . . .. . . . . . . . . ... .. . . .... .. . . .. . . .. . . . ... . . .. . ............ . .. . . . . . . . . . . . . .. . . ....... . . . . .... . . . . . . . ... .... . . ........ . . . . . ... . . . . .... . . .. . . ............. . . . .. . . . ... . . . . .. . .. ............. .. . . .. . ......................... .. ....... . . . . .. . . . . . . . . . . . . . . . ....... . . . . ...... ... . . . . . . . .............. ..... ........ . .. .. ...... . . . .. . . . ............ . ..... . ............. . . . ... . ... ..... .. .. ..... . .... . . . ......... .. . . ..... ... . ... . . ... ..... .. . . . . . . ....... . ............ ....... ......... ... .. . .... . . . .... . . .......... ... ... . . ........ . . . ... . ... . . . ............ .... . . . .. . ....................... . .. ....... ..... . . . ... . ... .. ... . . ... ......... . . ... .. . . . . . . . . .... .. . ... ................... . . . ....... ...... ... . . .....
lowQualScore : 0 000 5 555 0 0 333 777 7 3 3 3 3 3333 7 3 33 3 5 0 5 0 00 55 000000 55555 55 0 0 0 00 00 55 0 5 7 33333 7 3 7777777 00 7 7 7 0 55 0 5 00 0 0 888888888888888 222 0 000000 8 8 00 3 33 0000000000000000 3 3 3 3 7 3 77777 3 3 7 7777 3 3333 33 7777777 3333 3 3 33 3 77 33 333 7 7 3 3 7 3 000000000000000000000000 777777777777777777 00 77 3 3333333333333 7 33333333333333 3 3 0 7 3 3 33 0 333 3 77777 000000000 3 3 3 33 7 3 3 3 0 7 0 3 000 33 7 3 7777 33 0 7 00 5 8 88 0 0 0 888 0 0 55 2 000000000000 2 88 5 8 0 0 0 0 0 7 3 3 7 7 33 7 3 3333333 0 3 3 3 3333 7 7 3 3 7 3 0 333 7777 3 7 77777777 7 7 3 3 3 000 0 3 3 3 0000 7 7 77 7 7 0000000000000 3 7 7 33 0 7 7 333 0 3 7 3 00 7 33 3333333333333 00 7 3 00 7 3333333333333333333333333 00 7777777 0 8 2 5 00 2 8 0 0 0 0 5 0 0 0 8 0 6 0 4 0000000 0 0 8 8 000000 000 2 8 4 4 0 8 6 22222222222222 00000 00000000 0 88 00 666666 0 0 0 00 0 0 0 000000000000 0 00000 0 8888888888888 0 8 0 000 8 444 00000 00 00 00000 0 4444 4 0 0 666666666 88 0 0 00000 888 0 000 2 0 555 55555 22 2 5 0 2 6 0 0000000 0 444444444444 0000000 222222222 666 00 0 6666 8 4 6 0000 0 7 3333333333 222 777 7 0 33333333 2 0 0 222 7 000 0 7 4 666666666666 1111 7 4 7 66 7 99999999999999999999999 0 99 3333333 11111 7 7 7 777 7 222 22 777 7 0 777 333333333 7 7 777 22 7 7 7 7 2 7 7 7 2222 22 7 777 2222222222222222222 0 7 7 7777777 222222 777 5 0 00000
consensus : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ATCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTGA-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACGC-AAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC---GAAAGGCTGTGGCCGACCCCATTCGC-CAGTA-CAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGCGA-C-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGT-CTATCTGCATTGTCTGATGGTG-------CTGCG----------AGTGATCTC-CTCACATACTTAGCT-GGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACCAAGAAACTGGTAGCAGGAAACTGGCAGAG----CTTC--------CTACGAATG-GANAGCTA--CAAGACCGAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GACC-A------GGAGA--GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AAACC-ACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACA-------CCGATGT-T--G--TG-----CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACT-GN----C----TGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AAT---AGC-AGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-------ACTGCGC-G--GG-CAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGGT--TCGTGATCCTTTTGTATGATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
Reference ( family-3946 ) : NCATTANACNAGCATCAAGGGTGTTTTTTTTCGNCCTACAGATG---TGATTA-CACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTC--ATCGCTTCGGCAG-CGGACAAGATGAAGTTCATTTCCAATTTTCACAATAGAGGGAATAACGATGTTAAATGTAGTAGCTGTAATNANATANATTACTGCAGTCGGAAGGAAGGGTCTGTACGANGGTTATCTTAAACCAGCGGCAAAA--AGGATGAATGCCTTGCAG-TTCT-G--CAGAACACCTCCGTCGAATTTGAGAAGTAGAGGCTCGAAAAACAAAACATCACCCGATTTACGTCGAGATCT-ACGATTTA--AAGAGCT-TG-GATNTTATG-TAGCTAT------TGACTTGATTCTGGTGGTGAGTGGTG-GT--AGGGGTTGTGGTAGTT-----GGTG-CAGACTGAGATTTTAACATTGTATCA-TGAG-ATGGTGGCAC-TGTGGG-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACGCGTGA--GCCGATAATTG--CGAAAGCAGGGGCA-GCAGACTCCTTCTTG-GAGCATCTCGTGT-CTTGCGCACGNGAAGAGCAAA--TC---AAGTGACTGTAGCGGCGTTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCAATACT-----------------AATGTCTGAA------AGAAN-------CCAGGAATGACAGAGGA-ATCATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATAG-TTAATNGTGTACCTC-GATGCTC-TG--GAGNTGCC---GGTTCCACTGGT-CCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTGA-GGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAATGTAAGATAAGGCCGCTTCA--CCGTCAGAAAAC---ACAGAG--GGTGTTTTCTTNAATCCCAATTGANNAGGCACA--ANCAG-AA-TAATGGCTGCATCAAA-GGAGA-CGG-TGGAGCGGTCG-GNCTCGCTGACAATCCTA--GTGCCTTACGTCGCNGG-ANGGTTNC-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCTCTCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TANGTCATTA-TGATCAG-ACGC-AAGTGTGATCAGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCGTAGAGGAGATGGGC-AACCCGNTCGAGGAGGGGAATCAGGAT---GTAGCCAAN-C-TGGA-AACAAGGGAGATCG-AG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-AT-ATGGCCAAGAGCAGTTCGAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC---GAAAGGCTGTGGCCGACCCCATTCGC-CAGTA-CAA---GCTGAAGGCGTTCAGCACTTCCACTCCANGGTTCCAGAGAAAAGGTCAGCGA-C-GNTCGTCTCCGTCAAAAACGAT-CGTGAACTCTTCGCACGCAT-GTACACTGGTCTGCCAGACGAGAGA--TGGAA------ACG----CTTTCGTCA-CGAAAATCAGGCGTGT-CTATCTGCATTGTCTGATGGTG-------CTGCG----------AGTGATCTC-CTCACATACTTAGCT-GGAA-GTTTCCGACGCAAAGACAGAGACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACCGTTGAAGAGTATGCACAAACA-GATCGTCACCCCATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-G-ACACTCGCAAAGCAGAGACAAGGCTTGCGGAGATGTNTGGTGGCTGCCGCNGCCAAACC------------GCAGGAAACTGGCAGAN----CTTC--------CTACGAATG-GANAGCTA--CAAGAC-GAG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATGG-TTT-----GACC-A------GGAG---GACAA-ACAACT-CG---TCATTACTGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATGT-AAANC-ACTAAAGAAGCTGA--CANTCGGATGN---TGCTG--NAT-GC--TTCTCANACAG---CCCAGAACGNACACCATGC-AAATACTCA-TCCGGGACTNTAGACA-------CCGATGT-T--G--TG-----CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACT-GN----C----TGGN--ATT---CGGA-ACAGNC-C-GAGA-TTTCCGATANCTAGNAGCAG--ATGA-AAT---AGC-AGCTGGATTGGGACGA-GAGAAGGCTCATG-CAC------TA---CCAATGTTC--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAGTTTT--C-ACTGT--C----T---TTTGCTAGACG--TGGCAAGAAG-------ACTGCGT-G--GG-CAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCNG---AGGC---------GCT-GCTGCTGC-TGTCAT---CTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGACGCAATG----CGCA--TCA-T---CGAGAGGT--TCGTGATCCTTTTGTATGATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATCTT-CGC-----AAGGAAGAACAAT
gi|1 : CATTACACC--CATCAAGGGTGTTTTTTTTCGTCCTA-AGATGGCCTGATTAACACCGCG-TCCAA-CGGGACATTTTGGGGTGTTAGTGG-TGCG----CCCGACCGGG-TTGTTGATTTTTCAATCGCTTCGGCAG-CGACTAAGATGA-GTTCATTTCCAATTTTCACAATA-AGG--AT--CGAT------TGT-----CTG--ATTAAATATATTACTGCA--CGGAAGGAAGGGTTTGTA--ACGGTT-TCTTAAACCAGCGACAAAA--TAGATGAATGCCTTGCAG-TTCTTG--C-GAACACCTCTGTCGAATTTGAGAA-TAGA--CTCAAAAAACAAAACATCACCCGATTTACGTCGAGATCTTACGATC-A--AAG-GCT-T---ATCTTATG-TAGCTAT------TAACTTGATTCTGGTGGTG-GTGGTA-GT--AGGGGTTGTGGTAAT-------------AACTGAGATGTTAACATTGCATCA-TGAG-ATGGTGGCAC-TGTGGA-----GCTG-CAAG-AGGGTG-G--TTGAGTGAAAGCACTTGTGAAAGCCGATA-TTG--CAAAAGCAGGGGCA-GCAGACTCCTTCCTGAGGGCATCTCGTGT-CTTGCGCACAAGAAGAGCAAA--TC---AAGTGACTGTAGCAGCATTGTACAT-CTTGCAA-CACCGTG-CCTACAGTCA---CT-----------------AATGTCTGAA------AGAAA-------CCAGGAATG-CAGAGGA---CATCCTGAGTTTGAAGACT-------------GGAACTAGAACTGTTGG--------------TGTTCTTTC-AGGCAAGGATCG-TTAATTATGTACCTC-GATGCTC-TG--ACGATGCT---GGTTCCAC--GT-GCACGGACTGGATCACATGTAGGTTAT---AGAT-AGA-TACCAG-TGCA--CCTGAAGGACATGGTCG-AACTG-GCCACCAAACACCCAGATGTATCCAGGAAAT-TAAGATAAGGCTACTTCA--CCATCAGAAAAC---ACAGAG--GGTGTTCTCTTCAATCCCAATTGACCAGGCACA--AGCAG-AA-CAATAGCTGCATCAAA-GGAGA-CGG-TGGAGCAGTTG-GGCTCACTGACAATCCTA--GTGCCTTACGTCGCAGG-AAGGTTCT-GGGACCAGAAGT-TGTCATGCAGGGTACTCGAAGAATCT-TCAGGTTGGGAACCAACACTGG-AGACTGCAAACA-------TACGTCATTA-TGATCAG-ACGCCAAGTGT-AT-AGGCCTCATTTACGAAAGAAGTTCGCTCTGTCGTCGGTGTCATAGAGGAGATGGGC-AACCCGTTCGAGGAGGGGAATCAGGAT---GTAGCCAAA-C-TGGA-AACAAGGGAGATCGCAG--ATCCTGCTGACGTTATGAATGTC-AAGAGG-ATCATGGCCAAGAGCAGTTCAAGGCTTTC-ACC-AGAGAATGTCTGTTGGACAGAAC----AAAGGCTGTGGTCGACCCCATTCCT-C-GTAACAA---GCTGAAGGTGTTCAGCACTTCCACTCCAAGGTTCCAGAACAAAGGTCAGCAAAT-GCTCGTCTCCGTCAAGAACGAC-CGTGAACTCTTCGCACGCAT-GTACACTG-TCTGCCAGACGAGAGA--TGGAA------AC-----CTTTCGTCA-TGAAAATCAGGCATGT-CTATCTGCATTGTCTGATGGTA-------T--CG----------AGTGATCTC-CTCACATGCTTAGCTTGGAA-GTTTCCGACGCAAGTACAGAAACTCCTGTCACGACCTGTA-TT-TGCT-TG-ATGGAGCAGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTAGATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAGT-GTACACTTGCAAAGCAGAGACAAGGCTTGCGAAGATTTTTGGTGGCTGCCGCAGCCAAACCAAGAAACTGGTAGCAGGAAACTGGTAGAG----CTTC--------CTACGAGTG-GAAAGCTA--CAAGACCGAG--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGGAATAG-TTT-----CACC-A------GGAG---GACAA-ACAACT-TG---TCATTACTGACGA-CGA-----AGG--AGTGCTC--AGCAAGCCACTACTGCCAGGCCAGATCTGACT--C-CACTCG-TCCC-ATTT-AACCG-ACTAAAGAAGCTGAAGCATTCAGAT-A---TGCTGTCAAT-GCAATCTTCAAACAG---CCCAGAACAGACACCATGC-AAATA-TCACTACGGG-CTATAGACACATCGATCCGATGT-TAAG---G-----CTGG--C----AGTC---GTG--CCCTG--TCA--CA-GGA--AATGCAAACCAGAAAAGAC----AAACTCGC----A----TGGG--ATT---CCGA-ACAGTC-C-GAGT-TTTTCGATAACTAGGGGCAG--ATTG-AAT---AGC-AACTGGATGGGAACAA-GAGAAGGCTCATGCCAT------TG----CAATGTTTA-CACACTCTCA-CGTGAA-TATC-GACACTGTGTCTAGTTTTTCC-ACTGT--CGTAGT---TTTGCTAGACG--TGGCCAGAAGA------ACTGCGC-AGTGG-CAGT-CT-GA---C-GGTACTGTC-CAG--AATT---CACAGTCTAAGC---------GCT-GCTGCTGC-TGTCCT---CTGC--ACC-GC-ATG-AT-A-AT-CAGAACGACGCAATG----CGCA--TCA-T---CGAAAGG-----GTG--CCGTT----TGATCGAACT-AGGCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAAATCTTCCGCAATTAAAGAAAGAACAAT
gi|12 : aGCCATCGTCCAGTTGCTGAAGCCGGCTGT-AT-TAAAAACTGTTGAAGAGTATG-ACAAACA-GATCGTCACCCTATATA-------TGT-CCACGAAGCTGCAAA-AGTGACATACCTGAATCGGGTCTGGG------ATAGTTACTTTGCTGATTCACTGAAATGCAa
gi|14 : A-AAT---AGC-AGCTGGATTGGGATGA-GAGATGACTCATG-CAC------TA---CCAATGTTC--CACGCTCTCT-C-TGGA-GGT--GACACTGTGTCTAG--------------------T---TTTGCTTCACG--TGGCAAGAAG-------ACTGCAT-G--GG-TAAT-CTAAA---C-
gi|16 : GC-AGCTGGATTGGGATGA-GAGAAGGCTCATA-CAC------TA---CCAATGCGC--CACACTCTCT-C-TGGA-TGT--GACACTGTGCCTAGTTTT----ACT-T--C----------------ATG--TGGCAAGAAG-------ACTGCAT-G--GG-CAAT-CT
gi|18 : ATTGAACAGG---A--ATCGGTGA-TAATGGCTGCATCAAA-GGAAA-CGA-TGGAGCAGTCG-GTCTCGCTGACAAACCTA--GTGCCTGACGTCGCTGG-ATGGTTGC-TGGACaaa
gi|2 : CATTAAACGAGCATCA-GAGTGTTTTT---CGGTCTACAGATG---TGATTA-CACAGCGGTCCAAACGGGACATTCTGGGGTGTTAGTGGGTGCGAGATTCCGACCGGGGTTGTTGATTTTC--ATTGGATTGGCAGTCGGACAAGATGAAGTTCATTTC-AATTT-CACAATAGAGGGAATAACGATGTTAAATGTAGTAGTTGTAATGATATAAATTACTGCAGTCGGAAGGA--GGTCTGTACGAGGGTTATATTTAAACAG-GGCAAAA--AG--TGAATGG-TTGAAG-TTAT-GTGCAGAACAC-TCTGTCGAAATT-AGAAGTAGAGGCT-GAAAAACAAA-CATC--CCGATTTACGTCGAGATTT-ACGATTTA--AAGAGCT-TGAGATTTTATGGTAGGTGTGAATGTTGAATTGAT-ATGG--GTGAGTGGTGAGTGAAGGGTTTGTGGTA--T-----AGTG-TAGACTGAG--TTTAACATTGT--CAATGAGGATGGTGG-ACGTGTGGGAT---GCTGTCAAG-AGGGTGTGCTTTGAGTGAAAGCA-GTGTGA--GCCGATAATTGGAC-AAAGCAGGGGCAAGCAGACTCCT-CTTG--AGCATCTCGTGGATTTGCGCACATAGAGAGAAAAATTCGGAAAGTGACTGTAATGGCATTGTACATGCTTGCAAGCAC-GTGACCTACAGT--ATA---------------------TGTCTGAA------AGAAC-------ACAGGAATGACAGGAGA-ATCATCCTGAGTTTGAAGACT-------------GGAA-TAGAACTGTTGG--------------TGTACTTGCTAGGCAAGGATAGGTTAATAGT-CACGTCAGATGCTTGTGAAGAGTTGGCTGGGGTTCCACTG---CAACGGACTGGATCACATGTAGA--GT---AGATTAGAGTATCAGATAGAAACCTGA-GGACATGGTGGTAACTGAGCC--CAAACACC-AGATGTATC-AGGAAATATAAGATAAAG--GCTTAATCCCATCAGAAA-C----CAGAG--GGTGATTTCTTAAATCC-AATTGAGGAGGCA-A--GCTAG-AACTAATGG----ATCAAAAGGAGAGCGGGTGGAGCGGTTGTAACTTG--AACAATCCTAAGGTGC-TTACGT-GCAGGGAAGGTTTCTGGGAC-AGAAGTGTGTCATGCAGGGTACTCGAA-AATCTTTCAGGTTGGAAAC-AACAATGGGAGAATGCAAACA-------TTAGTCCATACTGATCAGTACGC-AAGTGTGATTAGGATACATTTACGAAAGAAGTTTGCT-TGTCG-CGA-GTTGTATAGGGGATGGGCCAACCGGATCGAGAGAAGGAATCAGGATTGAATAGCCAAGACGTGGAGAACAAGGGAGATCG-AGTGATTCTGCTGACGTTATGA-TGTCGAAGAGGTAT--TGGCCAAGAGCAGTTC-AGGCTTTCCACCCAGAGAATGTCTGT-GGCCAGAAA---GAAAGGCTGTGG---ACCC-ATTAGCTCAGT--CAAAACGC-GAAGGTGTTCAAAA-TTACACTCC-TGGTTACAGA-AAAAGGT-AGCAA-T-GATAGTATCCGTCAGAGACGATACGTGAACTCTTCGCACG-ATAGTACACTGGTCTGCCA-ACGAGAGAGGTGGAA------ACG----CTTTCGTCAATGAAAATCAGGCATGT-CTATC-G-ATTGTCTGATG-----------TATG----------AGTGATCTCGCTCACATACTTAG-T-GGAA-GTTCTCGACG-AACGTTAGAAACTCATGTC--GA--TGTA-TT-TGCTATGGATGGAG-AGC-ATCGTCCAGTTGCTGAAGCCGG-TGTGATGTAAAAACTGT-GAAGAGTAAGGA-AAACATGGTCAT-ACTGAATATA-------TGTGCCACGAAGCTGCAAA-AGTGAC-TACATGA-TCGGGTCTGGATAGTTAGTAGTTACTTTGCTGATTCACTGAAATGCAGT---ACACTTGCAAAGCAGAGACAAGGCTTGCGGAGATTTTTGGTGGCTACCGCAGCCAAACCAAGAAACTGGTAGCAGGAAACTGGTAGAA----CTTC--------CTACGAGTG-GAAAGCTA--CAAGACCGAA--CTA-TTCAGG-TT-CC--T-CT-CAGCAG-CT------C-----TCATGAAATAT-TTT-----GACC-A------GGAG---GACAA-ACAACT-TG---TCATTACGGATGA-AGA-----AGG--AGTGCTC--AGCAAGCCACTACT-----GCCAGATCTGACT--C-CACTCG-TCCC-ATAT-TA-CC-A-TAAAGAAGCTGA--CATTCAGATAT---TGCTG--CAT-GC--ATCTCAAACAG---CCCAGAACAGACACCATGC-AA-TATTCA-TCTGGG-CTATAGACATGCA---CCGATGT-T--A--AG-----CTGG--C----AGT----GT---CCCTG--TCA--CA-GGA--AATGCAA-CCAGAAA-GAC----AAACT-GG----C----TGGG--ATT---CGGA-ACAGTC-CCGAG--TTTTCGATAACTAGGGGCAG--ATGA-AAT---AGC-AACTGGATTGGGACAA-GAGAAGGATCATG-CAT------TG---CCAATGTTATACACACTCTCA-C-TGAA-TAC--GACACTGTGTCTAGTTTT--CCACTGTGTC----TAGTTTTGCTAGACG--TGGCAAGAAG-------ACTGCGCAG--GG-CAGT-CTGGA---C-GGTACTG-C-CAG--AATT---CACAG---AAGC---------GTT-GCTGCTGC-AGTCCT---CTGC--ACC-GC-ATG-AC-ATAA-CAG-ACGACGCAATG----CGCA--TCA-T---CGAAAGGT--TCG--AT---------TGATCGAACT-A-GCAA-------ATGCAC------A-----CA----CAAGGCCAGGAGGAAAATCTT-CG
gi|20 : G---TGAT---CACTGCG-TCCAA-CGGAACACTT-GGGGTATTAGTGA-TGCA----CC-GACCGGG-ATGTTGAATTGC--ACCGCTTCAGCAG-CGGACAAGAT
gi|21 : tgTCCTAAACGAACGGCAAAAGAAGAATGTATGCCTTACAGTTTCT-G--CA-AACACC-CCGCC-AGTTTGA
gi|3 : ttATG-TAGCTAT------TGGCTTGATTTTGGTGGTGA-TGGTG-GT--AGCGGTAGTGATAGTTTTAATGGTGACA-ACAGAAATTTTAACATTGTATTA-TGAT-ATAGTGGCAC-TGGGGGTAAGGGATG-CAAGTAG--TG-G--TTGGATG----CACGC-TGA--G------ATTA--CGACTGCATGGACA-GCAGACTCGTTCTTGCGAGCATCCCTTGT-CTTGCACACGCGAAGAACACA--TC---CAGTGACTGCAGCAGCGCTCTAAAT-CCTGCAA-CACCGTG-CCTACAAACAATACTGTCTGGGAGAAACGAGGAATGTTTGAATTTTGAAGACTGGTGTTGCCAGAAAGGA--GAGGATATCCGCC--AGTTTCATTACTAGGCAACCGTGCGGGAACAAAAACTGTTGGCTCAAATGTATGTGTGTTCGCTC-AATTAGGAGTAG-TTAATGGTGTTCCTT-GTTGCTC-TG--GAGGTGCC---GGT-CCACTGGTTCCACGCACTGGATCACATCCA--TTATGCTAGGT-GGA-TACTAG-TGCA--TCAGACGGACATGGCCA-ACCTC-TCCACCAAACACCTAGATATATCCAGGAAAAGAAAGG-AAGGCCACTTCA--CCGTTAAAAAACCCCACAGAGATGGTGTTTTCTTTAATCCCGATTGACAAGACACATGAACAG-AA-TAATGACGACATCAAG-GGAGA-CG--------------------------ACCCTA--GTGCCCTACGTGGTCGG-ATAATTGC-GGGACCAGAAAT-TGCTA----GAGTAATCGAAGAAT-TC-CAAGATGAGAACCAACACTAG-AGACGGCAAACAGCAGACATAGGTCATTA-TGATCAG-AAAC-AAGTGTA--CAGGCCTCATTTGTGAAAGATGTATGCTCTCTCGTCGGTATCATAGAGAATATTGGA-AACTCACTCAAGGAGGTGAGTCAAGAT---GTAGTAAAC-C-TGGA-CACAAAG---------------CTG-TGA-----TGAATGCC-AAGAGA-AT-A-GGATAAGAGCAGTTCGAGGATCTC-AAC-AGAGAGTGTCTGTTGGACAGAACAAGGAAA---T-TGGCTGACCCCATTCAC-CAAGA-CAG---GCTGATGGCATTCAGCCCTTCCACTCCAGGGAGCAAGAGAAAAGGTCAGTGA-CAGGTCACCGCCGTCAAAAATAAT-TTTGATCTCTTTGTACGCAT-GTACATTGG-CTGCAAGATGAGATA--TGAAATTCTTGACGAGTTCTTCCGTCA-CGAGAATCAGGCGTGTTCTCT-TGCATTGTGTTATGGTGGAAGCCTCTGCACTGATACCAAAGTGATCTC----ACATAC----CT-GGAATATGTATAACGCAAAAACAGAGACTTCTGTCACAACCTGTA-TTGTGCT-TG-ATGGATCAGCCATTGTCCAGATGCTAAAGATAACTGC-AT-TAAAGGCCTTTGAAGAGTATGCACAA-CA-GATCGTCACCCCGTATACCAGGTATAT-GCGCGAAGCTGTAAACAGTATCACTCCTGAATCTGGTCTGGA------ATACTTACCTCGCTGATTTACTGAAATGCAGT---ACATATGCAAAGCGGAG--------TGCGAAGATGTGTGATGGCTGCTGC-----------------------AGGAAACTGACATAA----CTTC--------CTAAGAATG-GACGGCTT--AAAAAC--AG--CTG-TTCAGG-TT-CC--T-CT-CAGCAG-CTAATTGCCAGTTATCAGGGAATGA-TTT-----GACT-A------GGA------CAA-GCAACT-CG---CGATTGCTGATGG-AGA-----GGC--AGTTCTC--AGCAAACAACTACT-----GCCAGATCTTACC--T-TATTCGCCCCC-ATGT--AATC-A-TAAAAAAGCTGA--CAGTCAAATGC---TGCTG--AAT-GT--TTCTCACGCAG---CCCAACATTCACACCGTTC--AATACTCA-TCT-AGACTCTAGACA-------CTAATGT-T--G--TG-----CTGG--A----AGT----AT---CCCTA--GCA--CA-GGA--TATGC-AACCAGAAGAAAA----AATAT-GA----C----TGGC--ATT---CGGA-ACAGT--T-AAGAGTTTCCAATACCTAATAGCAC--ATGA-AAT---AGC-ACCT
gi|4 : aGAA-GTCTCCGACGCAAAGACAGAGAATCCTTTCACGAACTGTAATT-TGCT-TG-ATGGAGCAGCCATTGTCCAGGTGCTGAAGCCAGCTTC-AT-CAAAGACCTTTGAAGAGTATTCACAA-CA-GGTCGTCATTCCATATA-------TGT-CCACGAAACTGCGAATAGTGACACACCTAGATCTGATCTGGG------ATACTTACCTTCCTGATTCACTGAAAGGTAGTAG-ACAGTCACAGAG--GGGACAAGGCGTGCTGAGACGTGTGGTGGCTGCCGCTGCCAAACC--------------AGGAAACTGGCAGAC----CTTG--------CTACCGATGTGACAGCAA--CAAGACTGAAACCTGGTTCAGG-TT-CCCTT-CT-CAGCAG-CT------------TCATGGAATGGCTTT-----GACCCA------GGGGA--GACAA-ACA-CT-CG---TCATTTCTTATG---GA-----ATGCCAGTGCTCCCAGCAAGCCACAACT-----GCCAGAT-TGACT--TACAATTG-TCC--ATGT-AAACCCACCGAAAAAGCTGA--CAATTGGATGGGGTTGCTG--CATTGC--CTATTACACAAGTTCCCAG--TGTACACCATGCCAAATACTTA-TCCGGGACCTTGGACA-------CCGATGTCT--GGCTG-----CTGG--CCCCCAGT----GT---CCCTT--GCATCCA-GGA--GTTGCAA-TCATGTAAGAC----AACCT-GTGTTAC----T--A--ATT---TGGA-ACAGGC-T-AGAA-TTTCAGATACCTAGCAGCAA--ATGA-AAT---AGC-AGCTGGATTTGGACGA-TAGAAGGCTCATG-CAC------TA---CCAATGTTT--CACGCTCTCA-C-TGGA-TGT--GACACTGCGTCTAATT------A-----------------TGCGAGAAG--TGGCAAGAAG-------ACTACAT-G--GA-CAAA-CTGGA---C-GGTACTG-C-AAT--AACT---CACTG---AGGCGCTGCTGCTGCT-GCTGCTGC-TGTCAT---TTGC--ACC-GC-GTG-AC-ATAC-CAG-ACGATGCAATG----TGCA--TCA-T---CGAGAGGT--CCGTGATCCTTTTATATGATCGAACC-A-GCAA-------ATGCAC------AGA---CATTGACAAGGCCAGGAGGAAAATATT-CGC-----AAGGAAGAACAATt
gi|4 : tgcttggaaTTGAAATCT-AC-ATTTGCTGATATCTCTG-GATATAATG-TAGCTAT------TGACTTGATTCTGGTgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagataccagaatcaagtcaatagctacattatatccagagatatcagcaaatgtagatttcaagtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : tgcttggaagaagtctccgacgcaaagacagagaatcctttcacgaactgtaatttgcttgatggagcagccattgtccaggtgctgaagccagcttcatcaaagacctttgaagagtattcacaacaggtcgtcattccatatatgtccacgaaactgcgaatagtgacacacctagatctgatctgggatacttaccttcctgattcactgaaaggtagtagacagtcacagaggggacaaggcgtgctgagacgtgtggtggctgccgctgccaaaccaggaaactggcagaccttgctaccgatgtgacagcaacaagactgaaacctggttcaggttcccttctcagcagcttcatggaatggctttgacccaggggagacaaacactcgtcatttcttatggaatgccagtgctcccagcaagccacaactgccagattgacttacaattgtccatgtaaacccaccgaaaaagctgacaattggatggggttgctgcattgcctattacacaagttcccagtgtacaccatgccaaatacttatccgggaccttggacaccgatgtctggctgctggcccccagtgtcccttgcatccaggagttgcaatcatgtaagacaacctgtgttactaatttggaacaggctagaatttcagatacctagcagcaaatgaaatagcagctggatttggacgatagaaggctcatgcactaccaatgtttcacgctctcactggatgtgacactgcgtctaattatgcgagaagtggcaagaagactacatggacaaactggacggtactgcaataactcactgaggcgctgctgctgctgctgctgctgtcatttgcaccgcgtgacataccagacgatgcaatgtgcatcatcgagaggtccgtgatccttttatatgatcgaaccagcaaatgcacagacattgacaaggccaggaggaaaatattcgcaaggaagaacaatgtgcagttcatccctccaacgaaggcaggtctggaggaacatgtcaagaaggcagtgtatcaaggaggatatgtgcgaggtaagaaaatgctggcaataccagaaattcctccaccaaccaacaggggctggtcaaggactagtgaacgacagtacacaccttactggaccaggctacctgatgcagtttacagctgcattgagctgatttcttgcaagagcaagaaagggtatgtgaggcgctgcaagtgcaaaaaggctgcccttcattacatagccctctgtgtatatgaaggggaccgcacatgtctatgagtcaagaacatacatacaagtgtggcaatgctgaaattgttaacatgacactaataatttgtgtacatgtatcttcagtagagaggccattgtagaatgtcagtatacacatttatgtagcatcagatactagactatgtagcatgtcagtgttggcaaagtattgtgtccaatatttacttgataacttacaaatacaattgtataacagcccgtggttaatgatattaagttgcaattgataccagtggattccttgtcccccaaaacatacatttagatAG--AACT---CACCG---AGGC---------GCT-GCTGCTGC-TGTCAT---TTGC--ACC-CT-GCG-AC-ATAC-CAG-ACAATGCAATG----CGCA--TCA-T---TCAGA----------------------GATCGAAAC-A-GCAA-------ATGCAC------AGA---CATTAACAAGGCCAGGAGGAAGAgtggcggtcattttgaaatccaatatggcggacacacagggagaatttcaagtggcccaatatctgaaaatgtttctaacatttgtgccaaatttggtgcttgtatcacaaaatacacaattctttgattatttaagctaagccgccccgctat
gi|5 : TTGAAATCT-AC-ATTT-------GCT----GAT---ATG-TAGCTAT------TGACTTGATTCTGGTacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacataccagaatcaagtcaatagctacatatcagcaaatgtagatttcaagt
gi|6 : agaactcaccgaggcgctgctgctgctgtcatttgcaccctgcgacataccagacaatgcaatgcgcatcattcagagatcgaaacagcaaatgcacagacattaacaaggccaggaggaagaacaatgtgcagctcatccttccaacgaaggcagctctggaggaacacgtcaagaggacagtgtatcaaggaggacgtgtggggtggggtcatgttctgctgccaacaccagagcttcatccaccaactaaccggggttggttaaagattagtgaaggacagttcacaccttattgaaccagcctgcctgatgcagctcacagttgcattgcgctgatttcttgcaagtgcaagaaagggagtgtgaggcgatgtactgcaccttttagtgcacaaccctctgtgtatgtgaaggggactgtacatgacgatgagtcaacaacatacatacacgtttggcaatgctgaaattgttaacatgacactgtttatgcatgtatgtatcttcagtttcggtatttacctagtgagaccattgtagaatgtcagtatacacctacatgtagccttagatactaaactaagtagcatgtcagtgttacacctaggcatttacagatctaaggcattttttcaaagtttagtgttgagtcaaatattcgcctgataatttccagatacaattatataacagactgtggttaattatattaagttgcgatagataccactgtattcctttacatCCAGGACTGTAGACA-------CCAATGC-T--G--TAGGTGACTGGTGC----AGTTCGTGTTCGCCATGCATCA--TATGGAGTATTGCAA-CGAGAAA-GACTAGAGAACT-GT----GAGTATGGACTATTGCATGAAGACAGACGC-CAGA-ATTCT-ATAACTGGTAGCAGCCATGAGAAT---AGC-AGCTGGATTGGGACGACAAGAAGGG-CATGGTACAGCGGATAGACTCAAAGT-C--AATGTCTTCAACGTGGAATGTCCACCACT-CGT-TAGTCAA--C-A-TGT--A----T---ATTGCTAGGAGAGTGGCA-GACATTATCTCATTACG------A-CAATGCTAGAAGACAGGTACTG-TACAATTAACTTCGCGTGA---AGGCA--------GCTAGCTGC-GCATGTCATGACTTGCCAGCCAGCAGTGGACTAGACACAG-ACGATGCA-TGAGCACGCAATTCAGTGGGCGAGAGGTGGTCGTGATCCTTTTGTAT-ATCGAACCGA-GCAAGAATAAGATGTAC------AGAGATCATTGACG----CAGGGAGAAAATCTTGGGC-----AAGGAAGAgt
gi|7 : cagcattaggcaT-GG----T----TGGC--ATT---TGGA-GCAGGC-C-AGAA-TTTCCTATACCTAGCAGCAC--ATGA-AATAGCAGCTGGNNNNNNNNNNNNNN-NNNNNNNNNNNNN-NNN------NN---NNNNNNNNN--NNNNNNNNNN-N-NNNN-NNN--NNNNNNNNNNNNNNNNNN--N-NNNNN--N----N---NNNNNNNNNNN--NNNNNNNNNN-------NNNNNNN-G--GGACAAT-CTGGA---C-GGTACTG-C-CAG--AACT---CGCTG---AGGC---------ACT-GCTGCTGC-TGTCAT---CTGC--ACC-AC-GTG-AC-ATAC-CAG-ACGATGCAATG----CGCA--TCA-T---CGAGAGGT--TCGTGATCCTTTTGTATAATCGAACC-A-GCAA-------ATACATGTACAGAGA---CATTGACAAG----GGAAGAAAATCTT-CGC-----AAGGAAGAACAATcgaatgagtgcatcgctcatccctccaaacgaaggcagcgtcgttggcggaacatgtaaagagcggcaggtgtatcaagaaatggtgtgtgagcagatactgggatcccaacacacaaatcgtccgccaacaaccaactggggttggtcaaggacgtgaaggacagtacacaccttactggaccgctaccctgattgcagctcacagcgatatgagcatggttttcatgtgcaaaagcagaacagggtagtgggacg
gi|9 : CACAAGGCAGTGACGAGAC--ACGTCGATGTAT-----CTGCCGATGCCACACA------------GTA--AAACCTGCAGAGAGCTCTCCGACGTATTCGACGAACG-GAT-GCCAAACAAGAT-AGG--CTG-TTCAGGATTGCC--TGCTGCAGCAGGCT------C-----TCATGGAATGG-TTTTGTTTGAAC-ACTATAAGGCGATAGACGAGACAACTTCGATACCAATACTGA-GATAGATAATGAGG--AATGCTC--AGCAAGACA-TCCT-----GCCAGATCT-ACTTAC-AATTCG-CCCCAACGTGAGAGG-ACGACAGAAGCTGgagcagctcatccctccaacgaaggcagctctggaggaacatgtaaagagggcagtgtatcaaggaaatgtgtgtagtcagatactgctaccaacaccaaatcgtcctccaccaaccaactggggttggtcaag
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): CCATTTTAGAAGAATGTCAGTGTAATCTAGCTTCAGATGCTAGACCATATAGCATGTCAGTATTATACCTAAGACATTTACAGGACTAATTAAGCCATTCATTTTAAAGTATTGTGTTGAATCCAATTTTTGCCTAGATAATTTCCAAATACAATCACGTGACATACTGTGGTAGATAATATCAAGTTGAAATTGGTACCATTGGATTTCTTGCGCCCACCCCAACATATACATATTTAGATATTAAAATCAAGTCAATAGCAGCATTGTGTCAAGAGATAATAGCATTTGGATTTCAAGTTGCGGCCATTTTGAAATCCAATATGGCGGACTTACAGAGAGAATTTCAAGTGGCCCAATAACTGAAAATGTTCGTAACATATTAATGAATATTTGTGCCAAATTTGGTGCTTGCATACCGAATTGTACACTTCTTACAAATACCGGTATTTGGGCTAAGCCGCCCGACTAAAA
Unaligned ( gi|10 ): TGCGCTACAATGCCCCAATAAAGATACATTTAGATTCCGGAATAACTGCAATATATCCACAGATAATAGCAAATGTATATTTCAAGTAGCGGCCATTTTGAAATCCAATATGGTGGGCACTTAAAAAGAATTTCAAGAGGCGCAATATCTGAAAATGTTTGCAACATGTTAGTGTACATTTGTGCAAAATGTGGTGCTTGTATCACAAAATGCACAACAGGTTTGCTATGCTGCTCCGCTATTATAAC
Unaligned ( gi|11 ): TTGACAATACCAAGTGGTAATTGATAAAATTGGATTCTTGAACCCCTGAATCGAGTCAATATATGCATTATGCACACAGATGATAGCAAATGTAGATTTCATGTGGTTGCTATTATGAAATCCAATACAGTGGACATGTAGAATTTCAAGTGGCCCAATATTTGAAAATGTATATAATATT
Unaligned ( gi|13 ): GGCCCAATATCTGAAACATGATCGCATATTAATATACTCATTTGTACATATATTGGTGGCTGGCTAGTAGTTCACAGAAGTCATGCGCAATAGTTTGCTTATTGTCTGTTTTCGCTACTTAGTTAGAAT
Unaligned ( gi|15 ): TGGTTTCTTGCAAGAGCAAGAAAGGGTGTGAGGAGCTGCAAGTGCAAAAAGGCTGCCCTTCAATGCACAGCCCTCTGTGAATGTGAAGGGAACCGCACATGTTGATGAGCCAAGAACA
Unaligned ( gi|17 ): GCCATTTTGAAATCCAATATTGCGGACACATAGGGAAAATTTCAAGTGGCTCAATATCTGAAAAACATGTTAAAGTACATTTGTACCAAATTTGGTGCTTGTAT
Unaligned ( gi|19 ): AAAATGATCGTTTTCAACAGTATAGAGGTACATTTGTACCAAATTTGGGTGCTTGTATCACAAAATAGCGCATAATTTGCTAATGCTGTTTGCTATAT
Unaligned ( gi|22 ): CCTGTATCACAAATGCATAATTCTTTAGATTATTTGAGCTAACCCGCCCGC