lowQualScore : 11111111111111111111111111111111111111111 1111111111111111
lowQualScore : 2222 111 1 1111 11 1 2 222222 22 5555555555555 4444444444444444444 1111 2222222 2222222 11111 1 3333333 1 1 333333333 22222222 1111111111 22222222 11111111 11111 77777777777777777777777777777777777777777777777777777777777777777 33333 1 111 222222222 111111 2222 1 11 22222 1111111111111 22222 11 11 111 111111 33333333333333333 111111 11111111 333333333333333 222222222222222222 1 1111111 111 11111111111111111111111111111111111111111 1111111111 1111 222222 66666666666666666 2222222 444444 222222222222 111 11 1111 99999999999999999999999999999999999999999999 111111111111 111 222 111 11 66666666666666 111 2222 11 1 5555555555555555 44444444444 1 1 11 1 6666666666 11 111 55555555555 111
lowQualScore : 1111 8 4 999 77 0 1 5 5 5 11 5555 11 8 5 0 6 1 555555 99 44 6666666666666 6 9999999999999999999 99 3 9999 6 8888888 5 3333333 5 5 22222 555 5 4 999 6 3 6 6 2 9999999 6 5 999 5 6 99999 6 6 7 6 666666666 8 22222222 5 9999999999 88888888 66 99999999 5 33333 5 66666666666666666666666666666666666666666666666666666666666666666 5 5 99 00000 6 7 111 000000000 6 777777 6 1111 0 33 11111 8888888888888 11111 4 33 22 66 4 22 66 4 222 4 4 111111 4 66 99999999999999999 000000 3 33333333 5 3 6 3 55 4 4 88888 444444444444444 5 5 777777777777777777 2 8888888 000 11111111111111111111111111111111111111111 5 7777777777 2222 222222 0 99999999999999999 77 1 2222222 5 8888 33 444444 333333333333 3 000 22 1111 3 99999999999999999999999999999999999999999999 888888888888 3 222 7777 7777 111 55 1 7777 666 444 7 3 66 11111111111111 444 9 4444 88 3 1111111111111111 88888888888 0 0 3 33 1 0 2 0000000000 2 2 3 2 66 33 111 77777777777 777 6
lowQualScore : .... . . ... .. . . . . . .. .... .. . . . . . ...... .. .. ............. . ................... .. . .... . ....... . ....... . . ..... ... . . ... . . . . . ....... . . ... . . ..... . . . . ......... . ........ . .......... ........ .. ........ . ..... . ................................................................. . . .. ..... . . ... ......... . ...... . .... . .. ..... ............. ..... . .. .. .. . .. .. . ... . . ...... . .. ................. ...... . ........ . . . . .. . . ..... ............... . . .................. . ....... ... ......................................... . .......... .... ...... . ................. .. . ....... . .... .. ...... ............ . ... .. .... . ............................................ ............ . ... .... .... ... .. . .... ... ... . . .. .............. ... . .... .. . ................ ........... . . . .. . . . .......... . . . . .. .. ... ........... ... .
lowQualScore : 0000 0 3 777 99 7 4 0 0 0 55 6666 99 1 0 0 7 7 888888 22 00 3333333333333 7 7777777777777777777 22 2 8888 7 7777777 4 9999999 0 0 11111 999 7 3 666 7 3 7 7 5 0000000 7 0 000 0 7 33333 7 7 0 0 888888888 0 66666666 0 5555555555 99999999 99 33333333 7 66666 7 88888888888888888888888888888888888888888888888888888888888888888 7 7 22 33333 7 2 555 777777777 7 555555 7 6666 0 22 55555 0000000000000 22222 4 99 22 44 4 22 11 4 888 0 0 555555 0 11 66666666666666666 555555 6 00000000 0 6 5 6 11 0 0 88888 111111111111111 7 7 999999999999999999 4 6666666 000 00000000000000000000000000000000000000000 7 4444444444 1111 111111 1 44444444444444444 11 7 6666666 7 5555 88 777777 444444444444 6 000 55 1111 6 44444444444444444444444444444444444444444444 666666666666 6 777 7777 7777 444 00 0 7777 444 666 3 6 55 77777777777777 555 0 8888 33 3 7777777777777777 00000000000 0 0 2 22 2 0 5 8888888888 5 5 2 5 55 88 000 55555555555 555 0
consensus : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT------AAAA--GATT-TGAAGAA-AAATGAA-AATCA-TATGCATG-TAACA----CGAACA--TTTAAAAC-AAAA-TCAGTGAATTT--CAAAACTAAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTGA-TA-CACACATAT-GTTTAGAT-AAATTAAT--T--TG-T-ACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT--A-C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-T-ATT----AAT-A---G--A-T-AA---TACG--CG-TA---------------TAAAATA---GAAGTA-CT--TA-CATT-TATTTTAC-ATGCAATGT--AAAAACT--TATGCA-TGAAATACT-GCATCA-TG---A--TTG-CT---G--T-TCAT--GAAATTC-CTTATC-AAATATTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T---G---AAAAA-T--TCAA-TTNGATGTA--AACAAA-CC-TT-NTG--TATC-TAG--TTTTT-CTG-C------C-AAA-ATA--------A--------AC------A-ATATGT-G------TCCC-TTCCACA-GACTCAAGA-T-AAAAT---TTT-----AA----T---AA-CAC-ATGT-G-AT------A------CATATCCTT-------TT---TA------------------A----------------------TTC-T------T---TCCTT----ACGC------TACACGTAAT--------GCAT-----ATTTA-CAA--AAGAAGCAC-TTA----ATTC-AGTA-----ATGATA------TAC--AT-G---TAN-ATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAG-AC---A----TAA----T-G-AT--TTAAAA----TCATG---TG-N-TCTT-A-CCTGTCGCG-ATAG-CTCAGCGCCCGTGTTAGATCCTAG--AGGTCG-T-GAGTTGGAGTCCTGCCAA--TGT-CATAGCTTCGATTCGTT---AACCTCG-C-----TC-GGA-CG-TAAA-CTTTTGATGAT-AGGCTAATTG---------TTTNTTNAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
Reference ( gi|3 ) : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTACGA-TAA-TAC-ATTT------AAAA--AATCCTGACGGACAAATGAATAATCA-TAT-CATGGTAACA---ACGA-CA--TTTAAGAC-AAAA-TCAGTGGAATT--CAAAACTAAA----TGCAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTGATTA-CACACATAT-GTTTCGAT-AAATTAAT--T--TG-T-ACTTTCGGC---AG----GAG-GGGGAAGG----GTGACAAAA-ATGTT--A-C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-T-ATT----GAT-A---G--A-T-AA---TACG--TG-TA---------------TAAAATA---GAAGTA-CTA-TACCATT-TATTTTAC-ATGCAATGT--AAAAACT--TA-GCA-TGTAATACT-GCATCA-TG---A--TTG-CT---G--T-TCAT--G-AATTC-CTTATC-AAATATTTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T---G---AAAA--T--TCAG-TTAAATGTA--AACAAA-CC-TT-ATG--TATC-TAG--TTTTT-CTG-C------C-AAA-GTA--------A--------AC------A-ATATGT-G------TCTC-TTCCAAA-GATTCAAGA-T-AAAGT---TTT-----AA----T---AA-CAC-ATGT-G-AT------A------CATATCCTT-------TT---TA------------------A----------------------TTC-T------T---TCCTT----ACGC------TACACGTAAT--------GCATAA---ATTTA-CAA--AAGATGCAC-TTA----ATTT-AGTA--T--GTGATA------TAC--AT-G---TAA-ATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAG-AC---A----TAA----T---AT--TCAAAA----TCATG---TG-C-TCTT-A-CCTGTCGCG-ATA--CT-AGTGCCC--GTTAGATCCTAG--AGTTCG-TGGAGTTGGAGTCCTGCCAA--TGT-CATAGC--------------AACCTCG-CA----TC-GGA-TG-TAAA-CTTTTGATGAT-AGGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGGAGGTCCT
gi|33 : AATGCATTCTGTT--A-TAGAGCATAAT-GTT--GTCAACA-ATACC-TAT-G-CAAC-------------------A-TAC-ATTT------AAAA--GAATCTGA-AGAAAAA-GAA
gi|23 : AATGCATTCTG-CA-A-TAGAGCATAAT-GTT--GTCAAAA-ATACA-TGT-G-TAAAAT----CA--GTAGGA-TAA-
gi|6 : ctgggttaatttgtatacatttttgcttataaatgaagcagtaatataaaataaGCATTCTG-TTAA-TA-ACAATAA--ATTTGGTCAACAGATACA-TATCG-CAACAT----CA--GTA-GA-TAA-TAC-AT--------AAAA--GATC-TGAAGAAAAAA--AA-AATCA-TATGCATGGTAAC-----CGA-CAGATTTAAAAA-AAAAATCAGTAAGTTT--TAAAACTAAA----TG-AGAA-CACATA-C-TGA-AT-T-C-AAT-T---TA-C-TA-TATA-TAGCA---------TA-CAC-CATAT-GTT-AGAT-AAAT-AAT--T--TG-TTACATTTGGC---A------AG-GGGG---G----GTGACAATA-ATGTTC-A-C--GATGCACCTAAT-TAATTAGTGAC--CTTC-AAG--A-T-ATTTTAAAAT-A---G--AAT-AAATATACG--TG-TA---------------TA--------GAAGTA-C------CATT-TATTTTAC-ATGCAATGT--AAAAACT--TT-GCA-TG-AATA-T-GTATata
gi|38 : TG-T--AATAGAGCATAATG------TCAAAA-ATACA-TAT-G-TAAAAT----CA--ATAGGA-TAA-gcttgcaaaatgctctagttattaaataactaaaaatcttggacaacaacttgacatattctgctaatttcaattcagattgttttctctgaattacatcaacatactggaacatggttgtacaaatgtatttgcaataatgtcaactattctgttatcgcgctattt
gi|4 : -T--A-TAGACCATAATGTTT--GTCAGCATGTA-A-CAT-G-CTATAAA---CA--GTAGGA-TAAATAT-ATTTT-----AAAG--AATT-TGA-AGA-AAACGAA-AACCA-TATGCACG-CAACACACACAAACA--TTTAA----AAAA-TCTGTGAATTT--CAAGACAAAA----TAAAGAC-CACATA-T-TGA-ATAT-G-ATTGTT--AA-T-TAGCACA-CACTAATAAATG-CTA-AACACAata
gi|2 : tatattgtAGA-CATAATGTTT--GTCCACA-ATACA-TAT-GGCAACAT----CAC-GTAAGA-TAAATACTATCT------AAAA--GACTCTGAAGAA-AAATAGAAAATCAATATGCATG-TAACA----CGAACA--T-----ACTAAAA-TCAGTGAAATTT-CAAAACTAAAAA--TGAAAAC-CACATG-T---G-AT-T-C-AAT-TA--TAGC-TA-CATA-CAGTAAT-AGTGAATAGCAC-CAC-T-GATTAGAT-AAATTAAT--TTATG-T-ACATATGGC---AGGGGTGGG-GGGGGGGG----GTGAC-AAA-ATGTT--A-C--AC-GCACCTAATGTAAG--GTGAC--CTTA-A-G--A-T-ATT----GAT-A---GGAA-T-AA---TACG--CG-TA---------------TAAAATAC--GAAGTATCTAGTACCATT-TATTTTACGATGCAATGT--AAAAACT--TATGCA-TGCACTACTCGCATCA-TG---A--TTG-CT---GATT-TCAT--GAAATTCGCTTATC--AATATTTTAAAgcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|1 : aaAGAGC-TAAATGTT--GTCAAAC-ATACAATAT-G-CAAACT----CA--GTAAGAATAAATAC-ATTT------AAAAGGAATC-TGAAGAA-AAAT---TATTCA-TATGCATG-TAACA----CGAACA--TTTAAAACCAAAA-TCAGTG-AATTTTCAAAACTAAA----TGAAGACGCACATG-TATGACAT-TTC-AATGTAGTTA-CCTA-CATA-CA-TAAT-A-TGAATA-CACACAT---GTTTAGATTAAATTAAT--T--TG-T-ACATTTGGCTGGAG----GGG-GGGGGGGG----GTGACAAAA-ATGTTAAA-CA-A--GCACCTAAT-TAC---ATGAC--CTTC-A-AT-A-TCATT----GAT-AACGG--A-A-TA---TACG--CGATA---------------T-AAATA---G-ATTA-CTAGTAACATT-TATTTTAC-ATGCAATGTAAAAAAACT--TATGCACTGCACTACT-GCATCATTG---A--TTG-CT---G--T-TCATTGA-AATTC-CTTATC-AAATATTTTAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaattggatttggaaaaaattcagtttaattaaacaaccttatggttatcctattttttctgccaaaagtaaacaatatgtgtctccttccaaaagattcaagaataaagttttaatgacacatgtgatacatatcctttttaattcttcccttacgctacactaatgcatttatcaaaagaagcacttaatttagtaattgatatacatgtaaatttgttttctaaataagtataagaacataatattcaaaatcataatttgctcttacctgtcgcgaataagctcagtggccgtgttagatcctagaggtcgtgagttggagtcctgccaatgtcatagcttcgattcgttttaaatctcgctcgatgttaaaccttttgatgataggctaattggtttttgttgaatgttcggtatagaagcaagacgcaacggtttttaacaaaacggaggccct
gi|19 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaA-TAT-G-TAACATGCTACAAAGTGGAA-TAAATAC-ATTTTTTTTAAAAG--AATT-TGAAGAA-AAA-GAA-AATTA-TATGCATG-CAACA---CAAA-CA--TTTACAAC-AAAG-TCTGTGAATTT--CAAAACAAAACAATTAAAGAC-CACATA-T-TGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaatttttgaaaaaattcagtttaattgtaaacaaaccttaatgtatctagtttctgccaaagtaaacaatatttgtctcttccaaaaatcaagataaaagtttaagtaaccacatgcggatacatatcctttttaattcttttccttacgcttacacgtaatgcatttacaaacaagaagcactttaatttgagtattatatacatgtaaattgtttatttctaaataagataagacataatattcaaaatcatgtgtcttaacctgtcgtatagtcagtgcccgtgttagatcctaggaggttcgtttgagttggagtcctgccaatgtgcatagcttcgattcgttaaacctcgcctcggatgtaactttgatgataaggctaattgttgttgaaggtcggtattagaagcaagacgcacgggttttacaaaacga
gi|35 : taATCA-TATGCATG--AACA----CGAACA--TT-AAAAC-AAAA-TCAGTG---------AAAC-AAA----TGAAGAC-CACATATT-TGA-AT-T-C-AATGTA--T
gi|17 : AACTACA----AGAAGAC-CACATA-T-TTG-AT-T-CTAATGTA--TA-CCTA-CATATCAGCAATCAGTGACTA-TACACATAT-GTTTAGAT-AAATTAATCCT--TG-T-ACATTTGGC---AG----GAA-GGGGGGGGGGGTGTGACAAAAGATGTT--AGCAAA--GCACCTAAT-T-A---GTGACAACTTC-A-gt
gi|4 : ttcAAG----TGGATAT-CACATA-C----------C-ACTGTA--TC-C-TA-CACA-CAGCAAT-A--------CACACAGAT-GTTTAGAC-TAATTAAC--T--AG-T-ACatgat
gi|5 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacACACATATCATTTAGAA-CAATTAAT--T--TGGT-ACAGTTGGC---------GAGTGGGGGGGG----GTTACAAAA-CT-------T--A--ACATCTAA--------GTCAC--CTTC-A-AGAA-T-AT-----AATGA---G--A---AA----------G-T----------------TAAAATATTAGAAGTA-GT-----CATTCTATT--AC-ATGCAATGT--AAAAACT--TATGCA-TGAAATTAT-GCCTTG-CA---AATTTGCCT---G--T-TTAT--actttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|29 : gcttAAAA-ATGTT--A-C--A--GCACCTAA--------GTGAC--CTTCCA-G--A-T-ATT----AAT-A--------T-AA---TGAA--TA-GA---------------TAAAATA---GAAGTA-C------CATT-TATTTTAT-ATGCAATGT--AAAAACT--TATGCA-TGAAATAtgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|10 : A-ATGTT--A-C--A--GCACCTACC-TAG---GTGAC--CTTCAA-G--ATT-ATT----AAT-A---GA-A-TAAA---TATGCTTG-CACTTGATTGGGAAAATTAAAATA---GAAG-------TATCATT-CATTTTAC-AT
gi|26 : gA-ATGTT--A-C--A--GCACC-----TAA---GTGAC--CTTCAA-G--C-T-ATT----AAT-A---G--A-A-GA---TATA--TG-nnnnnnnnnnnnnnnnnnncacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|21 : cCCATT-CATTTCAC-ATGCAATGT--AAAAACTCCT--GCA-TGAAATA----CATAA-TGCAAA--ATG-CTATAG--T-TAAT--A-AATcttgcacttggtttgctacattgaaaggatggggaaatcaaaatagaagtaccattcattt
gi|5 : ACT-GCATCA-TA---A--TTG-CT---GT-T-TCAT--GAAATTC-CTTATCAAAATATTTTAAaactaaacgtcttggtaacaagtgactgttcttggtaatttcaattcagattgctttct
gi|32 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcag-GCATCAGTA---C--TTG-AT---G--TCTCAT--G-AATTC-ATTATG-AAATATTTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|14 : acatttgcattaatgtcgcatattctgtttatctgctattcaagttcaaaggcagacTCATA----TATTGAACTT---G---AAAA--AAATCAA-TTAGATGTACAAACAAA-CC-CT-TTG--TATA-TA---TTTTT-CTG-C------C-AAA-ATA--------ACAATTTAAAC------A-ATGTGT-G------TCCC-TTCCACA-GAT--AAAA-T-CAATT---Taag
gi|12 : cttataatctTCATATATTGATT-----TTGAA---AAAA--A--TCAA-TTAGATGTACAAACAAA-CC-CT-TTG--TATA-TA---TTTTT-CTG-C------C-CAA-ATA--------ACAATTTAAAC------A-ATGTGT-G------TCCC-TTCCACA-GAT--AAAA-T-CAATT---Tgactacttcaatatttcatatgcaagcatttctctatagtctctaaggattatatgacagacatagcctgttacattacac
gi|2 : atgtattacttataatcTG----GATT-----T---GGAAAAAA--T--TCAG-TTTAAT-TA--AACAA--CC-TT-ATGGTTATCCTAT--TTTTT-CTG-C------C-AAAAGTA--------A--------AC------A-ATATGT-G------TCTCCTTCCAAAAGATTCAAGAAT-AAAGT---TTT-----AA----T---GA-CAC-ATGT-G-AT------A------CATATCCTT-------TT---TA------------------A----------------------TTC-T------T---CCCTT----ACGC------TACAC-TAAT--------GC-------ATTTATCAA--AAGAAGCAC-TTA----ATTT-AGTA--A--TTGATA------TAC--AT-G---TAA-ATTTGT---TTTC--TA-AA-------------T--AA-------------G------------TAT------------AAGAAC---A----TAA----T---AT--TCAAAA----TCATAATTTG-C-TCTT-A-CCTGTCGCGAATAAGCTCAGTGGCCGTGTTAGATCCTAG--AGGTCG-T-GAGTTGGAGTCCTGCCAA--TGT-CATAGCTTCGATTCGTTTTAAATCTCG-C-----TC--GA-TGTTAAACCTTTTGATGAT-AGGCTAATTGGTT------TTTGTTGAATGTTCGGTA-TAGAAGCAA--GACGCAA-CGGTTTTTA----------AC---AAAACGGAGGCCCTgactacttcaatatttcatatgcaagcatttctctattagtctctaaggattatatgacagacatagcctgtttacatta
gi|4 : aaagacataatgtttgtccacaatacatatggcaacatcacgtaagataaatactatctaaaagactctgaagaaaaatagaaaatcaatatgcatgtaacacgaacatactaaaatcagtgaaatttcaaaactaaaaatgaaaaccacatgtgattcaattatagctacatacagtaatagtgaatagcaccactgattagataaattaatttatgtacatatggcaggggtggggggggggggtgacaaaatgttacacgcacctaatgtaaggtgaccttaagatattgataggaataatacgcgtataaaatacgaagtatctagtaccatttattttacgatgcaatgtaaaaacttatgcatgcactactcgcatcatgattgctgatttcatgaaattcgcttatcaatattttaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaatA----AATT-----T---GT--AAAA--T--TTAA-TTACATGTA--AAC----CC-TT--TG--TATC-TAGTTTTTTT-CTG-T------C-AAA-ATA--------A--------CC------ACATAAACAA------TGCC-TTCCACA-GACTCAAGA-T-AAAATCAATTT-----GAACCCT---AT-TTC-ATGT-GCAC------G------CAT-TTCTT-------TC---TA------------------AGGACTAGTCGACAGACATAGCGTTT-T------TTAATTCTT----TCCT------TTCACG--AC--------ACATAATGTATCTA-GAA-------GCAC-TCA----ATTA-AGTA--T---TGAT------------AT-G---TA-------TTTATTTC--AA-AA-------------TA-AA-------------A------------TGTTTGTTTGACTAAAAA-AC---A----TAA----TAG-AT--TTAAAA----TCATG---TG-A-TCTT-G-CATGT
gi|1 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaTT-----T---G---AAAAAAT--TCAGTTTAATTGTA--AACAAA-CC-TTAATG--TATC-TAG----TTT-CTG-C------C-AAA-GTA--------A--------AC------A-ATATTT-G------TCTC-TTCCAAA-AA-TCAAGA-T-AAAAG---TTT-----AAG---T---AACCAC-ATGCGG-AT------A------CATATCCTT-------TT---TA------------------A----------------------TTCTT------T---TCCTT----ACGCT-----TACACGTAAT--------GC-------ATTTA-CAAACAAGAAGCACTTTA----ATTTGAGTA--T---T-ATA------TAC--AT-G---TAA-A-TTGTTTATTTC--TA-AA-------------TA-AG---------------------------AT------------AAG-AC---A----TAA----T---AT--TCAAAA----TCATG---TG---TCTTAA-CCTGTCGT--ATA--GTCAGTGCCCGTGTTAGATCCTAGGAGGTTCGTTTGAGTTGGAGTCCTGCCAA--TGTGCATAGCTTCGATTCGTTA--AACCTCG-CC----TC-GGA-TG-TAA---CTTTGATGATAAGGCTAATTG----------TTGTTGAA-GGTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGaccttcgtttctt
gi|5 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaagagctaaatgttgtcaaacatacaatatgcaaactcagtaagaataaatacatttaaaaggaatctgaagaaaaattattcatatgcatgtaacacgaacatttaaaaccaaaatcagtgaattttcaaaactaaatgaagacgcacatgtatgacatttcaatgtagttacctacatacataatatgaatacacacatgtttagattaaattaatttgtacatttggctggagggggggggggggtgacaaaaatgttaaacaagcacctaattacatgaccttcaatatcattgataacggaatatacgcgatataaatagattactagtaacatttattttacatgcaatgtaaaaaaacttatgcactgcactactgcatcattgattgctgttcattgaaattccttatcaaatattttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaattTT-----T---G---AAAAA-T--TCAG-TTTAATGTA--AACAAA-CC-TT-ATG--TATC-TAG--TTTTT-CTG-C------CAAAA-GTA--------A--------AC------A-ATATGT--------TCTC-TTCCAAA-GATTCAAGA-TAAAAGT---TTG-----AA----T---AA-CAC-ATGT-G-AC------A-------ATATCCTT-------TT---TA------------------A----------------------TTC-T------T---TCCTT----ACGC-------ACACGTAAT--------GC-------ATTTA-C-A--AAGAAGCAC-TTA----TTAT-AGTA--T------TAT-----TACG-AT-GC--TAACATTTTTTTAT-----AA-AA-------------T--AA-------------G------------TAT------------AA--AC---AAGGTTAATACCT---AT--TCAACATTATTTATG---TG-CATCTT-ACCCTGTa
gi|7 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgatTT-----T---G---AAAAA-T--CCAA-TTTCGCGTA--AACAAATCC-TT-CT---TATC-TAG--TTTTT-CTT-C------C-GAA-ATA--------ACTTAA---AC------A-ATGTGT-G------TCCC-TTCCACA-TACTCAAGA-C-AAAAA---TTTAAATGAA----TTTGAA-CACTATTT-C-AT------ATGCAGGCATTTCTCTCCATGGATTAGATA------------------ACAGACATAGCC-----------TTC-T------T---TCCTT----ACACGACGTATACATGTAATTTAGTACTGCATC-----TTTA-CTA----GAAGCAC-TTACTACATGT-AGTAATTCAGTAATGAGTCATTACTAAT-GACATAC-ATTTGTTTATTCTAATA-AAATGTTTGCT----TG-AA-------------G------------TGT------------AAA-AC---A----TAA----TGG-AT--TTAAAG----GCATG---TG-A-TCTT-A-CCT-TCGttttct
gi|8 : atttacacttcaaagtatatcttatatataatctcatagacaaattgatTT-----T---G---AAAA--T--TCAA-TTTAGTGTA--CCCAAT-CC-T--ATA--TATC-TAG--TTTCT--TGCC------C-AAA-ATA--------A--------CCTTAAAAA-ATATGT-G------TC-C-TTTAAAA-GATGCAAGA-T-AGAAT---TTT-----G---------AA-CAT-ATTT-T-ATATGCAAA------CATTTTTTC-------TC---TAAGGATAAGTAACATATGTA----------------------TCC-TGTTTAAT---TCTTTCCCTACGC------TGCACGCAAT--------GT-T-----ATTTC-CAA--GGAAC-CAC-TTA----GTTC-ATTA-----ATGAT-------TAG--ATAG---CAC-ATATG-CTAATTC--TAGAA-------------TA-GAATGTTTGCTTGTTG------------TAT------------AAG-AC---A----TAA----TAGAAT--TAAAAA----TAAGA---T----TCTT-A-CCTgttc
gi|25 : ttcactgtatttcttaatttcttaaaagcaattatt-TTAGATGTG--GACAAA-CCCTT-TTG--TAAC-TAT--TTTTTTCTG-CAAATATC-AAC-TTA--------A--------AC------A-ATATGT-ACTAGTATCCC-TTCCATA-GACTCAAGA-T-AAAttatttcttgacct
gi|39 : agtccaTCTT-CTG-C------C-AAA-ATATCAAGTAAA--------AC------A-ATCTGT-A------TCCT-TTCCACA-Gtacaacatttctttca
gi|34 : acTA--------A--------AC------A-ATGTGT-G------TCCC-TTCCACA-GACTCAATA-T-AAAAT---
gi|16 : aactT-----AG----C---AA-CAT-ACAT-G--T------A------CAT--CCGT-------TT---TA------------------A----------------------TTC-T------T---TCCTT----ACGC------TACATGTAAT--------GCAT------TTT--CAA--GAGAAGCAC-TTA----ATTC-AGTA-----ATGATA------TAC--AT-G---TAC-ATTTGTTTATT-C--TA-AA-------------TA-AATTGTTTGCTTGAAG------------TAT------------AAG-AC---A----TAA----T---ATATTTAAAA----TCATG---TG-C-TCTT-A-CCTGCCcaatttgaacgctaccttggtattttattatatg
gi|20 : TA----ATTC-AGTG-----ATGATA------G-------G---TAT-ATTTGTTTATT-C--TA-AA-------------CATAA-------------GCTTTGCTTGACCTAT------------AAG-AC---A----TAA----TAG-AT--TTAAAA----TCATG---TGAT-TCTTGA-CCGGTCACA-GTA--ttt
gi|28 : aTA----ATTC-AGCG-----ATGATA------T-------G---TAT-ATTTGTTTGTT-C--TA-AACAAAATGTTTGCTTA-AA-------------C------------TAT------------AAG-ACAAGA----T-A----T---AT--TTAAAA----TGATG---TG-G-TCTT-G-CCTggtcagtggtggagtgttcgcttcataa
gi|31 : tatttaTA----ATTC-AGCG-----ATGATA------TGT--AC-G-------ATTTGTTTTGTTC--TA-AACAAAATGTTTGCTTA-AA-------------C------------TAT------------AAG-ACAAGA----T-A----T---AT--TTAAAA----TGATG---TG-G-TCTT-G-CCTttgtttctt
gi|22 : TTT-AGTA-----ATGATA------TAC--AT-G---TAA-ATTTGTTTA----------A-------------TATAA-------------G------------TAT------------AAG-AC---A----TAA----T---AT--TCAAAC----TCATG---TG-C-GCTT-A-CCTGTCGCG-ATAG-CTCAGCGCACGTGTTAGATCCTAG--AGGTCG-T-GAGTttgtttctt
gi|18 : ATCCTAA--CGGTCG-TG-AGTTGGGGTCCTGCCAATGTGT-CATA----------------AGCTTCGTCAAAACTCAGGACCG-T-AA-CATTTAATGAT-AAG---ATTGTGGATTTCTTTTTTTCAATATTC--T-TTAGAAGCAAGTGACGC-ATTATGTTTTAAGTGATTTGGACCTAAAAACGGAGGCCCT
gi|36 : A-CG-TAAA-CTTTCGATGAT-AAGCTAATTG---------TTTCTTCAATATTCGGTATTAGAACCAA--GACGC-A-CGGGTTTT-----------AC---
10 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|9 ): GCAGCAACACAACAACATTTAAAAAAAATTGTGATTCCAGAACAACACACAGTCACATTAATATTAAAACAGAATAGATACAATAATACTACACGCGCTAAAGATGGCAAGTAGTAAAATATTACAATGAGTATAACTACACACACACATACACACAAGCAATGACATACAAGGTTTGGAGTAATAAATTGTAAGCTTGCAGGATATTTGACAAATCTTGCAGCATCTTTCAAGTTGTTAATAATGAGAAATTCTTGCATTTGAATGGTTGCCTTGAAAAAGAAAGGGAAATCAGACAAAAATGTCATTCATT
Unaligned ( gi|11 ): ACTTTCATATTTAATAATCTCATAAACAAATTCTATTTCGATAAATATAACTAGATTGCCAACAACCCTTGTGTTATCTAGTCTGTCCATTCCACAGACTCAAGATTAATCAATTGAACCTACTTTCAGTTATTTCATATGCAAGCATTTCGTCTCTATGTCTCTAAAAAAATAGGTGGGAGACGTCTATTTACATTACAATATGTATTTTATAATTCAG
Unaligned ( gi|13 ): ATGAAATAAATTTGATTACTATTTCATACGTGAAAATTTTCTCTAGTACGACTTAGGTGACTTATGCATGTATAGCCTTTTAAATCCATTTTTGCATGACACATAATGCACAAAAGAAGCAAATATTTCAATGACGATATACGACTGTTTGTTCTAAATAAATGTTTGTTTTTATAAACTACAAGATCATGCAATCTTGCCTTTGTTTTTTT
Unaligned ( gi|15 ): TATAGACAGGCAACACACCCAAAGAACGAAAACAAAACAATTCAAAGATTGCATCTTAAATCAAAATGAATGACTGTCAATACACATACAAATAAATATTACACACATCAACACACATACAAATAAATACTACACGCAGCAATACACAAATAAATACTACACACAGCAACACACATACA
Unaligned ( gi|24 ): GTGGGGGGGGGGAGGGGGTGGTAAAAGATATTTGTTTAAGCGGCAGGCACCTATTTGATTTTTATCGTTGAAGGGGGTATACTATGAAGATGACATATGCTTTAACATTTTTTTAT
Unaligned ( gi|27 ): GCTGCATTAATTTGTATGAGCTTTTTGCTATTGAGTGAAGCAGTATAATAAAATATACTAAAATACATGCTATTTTTGAGCAGAATGTTGTCCACATACATAATATGTAA
Unaligned ( gi|30 ): ATATTACATACAACGAAATATTACACATAGCAATACACAATCAAACAAATATTACACACAAGAATACGCATTTAAATAAATTACACAAACAGCAATACAAACACAA
Unaligned ( gi|37 ): AAGAACCATTCACTTTACATATATGAAATATGTATGCTTGCAAAATGTTGTAGTTAATAAATAAGTAAA
Unaligned ( gi|40 ): ATTGTTGACCAGTCACGGTAGGTCAGTGGTAGAGAGCTCCGTAA
Unaligned ( gi|41 ): TGCATTTGCGTTAATGTCAACATATTCTGTTTACCTGCTATT
Alignments
lowQualScore : 1111 111 1 1111 11 11111 2222222 11 1111111 1 1 222222222222 1 222222222 1111 1111111111 111111111 1 44444444444444444444444444444444444444444 222 444444444 11 11 1 666666666666666666666666666666666666666666666666666666666666666 1111 11111 11 11 33333333333333333 111111 3333333333333333333333333333333333333333333333333333333 111111 111 1111111 6666666666666666666666 11111111 11111 222222222222222 11 111111111111 11111 99999999999999999999999999999999999999999999 111111111111 33333 11 11 11 11 1 1 3333333333 11 22 444444444 11 44444444444 111
lowQualScore : 6666 6 2 333 66 0 4 4 4 0 3333 00 0 4 1 5 0 44444 0000000 0 5 99 5 5 6666666 5 5 1 3 888 5 0 1 999 9999 0 4 4 77777 5 5 5 2 777 1 5 5 5 0 777777777777 3 5 1 5 77 77 1 777777777 6 4444 4 4444444444 888888888 55 8 55 8 8888 4 88888888888888888888888888888888888888888 5 000 66 333333333 4 4 5 77 1 5 1 8 8 11 8 11 8 6 0 8 0 88 0 333333333333333333333333333333333333333333333333333333333333333 7777 00000 55 55 44 3 22 7 00 55 3 88 55 3 3 3 0 77 3 7777 00 44444444444444444 888888 3 111111 3 2 3 1 4 4444444444444444444444444444444444444444444444444444444 66 8 222222 000 4444444 777 0000000000000000000000 4 777 4 66666666 11111 888888888888888 44 4 666 3 777777777777 3 444 44 2 00000 3 888888 5 2 7 44 3 11111111111111111111111111111111111111111111 555555555555 33 6666 99999 6666 555 33 3 6 11 8 5 2 2 8 8 99 33 0 0 3 5555555555 00 22 2 8 8 0 88 8 666666666 11 1 0 11 11 8 8 55555555555 777
lowQualScore : .... . . ... .. . . . . . .... .. . . . . . ..... ....... . . .. . . ....... . . . . ... . . . ... .... . . . ..... . . . . ... . . . . . ............ . . . . .. .. . ......... . .... . .......... ......... .. . .. . .... . ......................................... . ... .. ......... . . . .. . . . . . .. . .. . . . . . .. . ............................................................... .... ..... .. .. .. . .. . .. .. . .. .. . . . . .. . .... .. ................. ...... . ...... . . . . . ....................................................... .. . ...... ... ....... ... ...................... . ... . ........ ..... ............... .. . ... . ............ . ... .. . ..... . ...... . . . .. . ............................................ ............ .. .... ..... .... ... .. . . .. . . . . . . .. .. . . . .......... .. .. . . . . .. . ......... .. . . .. .. . . ........... ...
lowQualScore : 0000 7 5 666 99 0 4 4 4 1 9999 66 1 4 9 7 1 33333 1111111 1 7 99 7 7 9999999 7 7 4 6 666 7 1 4 777 4444 8 4 4 44444 0 0 0 5 222 4 7 7 7 7 666666666666 2 7 7 7 99 99 4 555555555 7 2222 4 2222222222 999999999 00 2 55 0 5555 0 66666666666666666666666666666666666666666 0 666 99 333333333 4 4 0 99 4 7 6 0 0 00 0 00 0 0 8 0 8 88 8 000000000000000000000000000000000000000000000000000000000000000 0000 00000 55 55 88 6 88 3 00 88 6 22 00 6 6 6 4 99 3 1111 44 00000000000000000 888888 1 999999 1 8 1 4 0 9999999999999999999999999999999999999999999999999999999 99 9 888888 999 4444444 888 6666666666666666666666 4 888 4 33333333 11111 666666666666666 44 7 999 3 111111111111 1 111 22 3 88888 1 555555 1 4 2 22 1 22222222222222222222222222222222222222222222 888888888888 22 5555 22222 5555 444 22 1 2 22 0 0 8 5 0 0 00 88 0 0 2 5555555555 22 55 5 0 0 8 88 0 000000000 88 0 8 66 00 0 0 66666666666 555
consensus : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG--A-TC-TGAAGAA-AAAT-GAA-AATCA-TATGCATG-TA----ACA-CGA-ACATTTAAAA-C-AAAA-TCAGTGAA-TTTCAAAACT--AAA----TGAAGAC-CACATA-T-TGA-A-T-TC-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-T-A-CACACATAT-GTTTAGA-TAAATTAAT--T--TG-TACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT--A-C--A--GCACCTAAT-TA---A-GTGAC--CTTC-AG--A-TATT----AAT-AG--ATAA-------ATAC--GC--GTA---------------TA-AAATA---GA--AGTANT--A----C-ATT-TATTTTAC-ATGCAATGT--AAAAACTTATGCA-TGAAATACT-GCATCA-TGA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCAT--ATTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAG-ACA----TAAT-G---ATTCAAAA----TCATG---TG-NTCTT-A-CCTGTCGCG-AT-AGCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
Reference ( family-2589 ) : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG--A-TT-TGAAGAA-AAAT-GAA-AATCA-TATGCATG-TA----ACA-CGA-ACATTTAAAA-C-AAAA-TCAGTGAA-TTTCAAAACT--AAA----TGAAGAC-CACATA-T-TGA-A-T-TC-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-T-A-CACACATAT-GTTTAGA-TAAATTAAT--T--TG-TACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT--A-C--A--GCACCTAAT-TA---A-GTGAC--CTTC-AG--A-TATT----AAT-AG--AT-A-------ATAC--GC--GTA---------------TA-AAATA---GA--AGTACT-TA----C-ATT-TATTTTAC-ATGCAATGT--AAAAACTTATGCA-TGAAATACT-GCATCA-TGA--TTG-CTG--TT-CA-TGAAATTC-CTTATC-AAATATTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCAT--ATTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAG-ACA----TAAT-G---ATTTAAAA----TCATG---TG-NTCTT-A-CCTGTCGCG-AT-AGCTCAGCGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTNTTNAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
gi|1 : AGAGC-TAAATGTT--GTCAAAC-ATACAATAT-G-CAAACT----CA--GTAAGAATAAATAC-ATTT-----AAAAGGAA-TC-TGAAGAA-AAAT-T---ATTCA-TATGCATG-TA----ACA-CGA-ACATTTAAAACC-AAAA-TCAGTGAATTTTCAAAACT--AAA----TGAAGACGCACATG-TATGACATT-TC-AATGTAGTTACC-TA-CATA-CA-TAAT-A-TG-A---A-TACACACAT-GTTTAGATTAAATTAAT--T--TG-TACATTTGGCTGGAG----GGG-GGGGGGGG----GTGACAAAA-ATGTTAAA-CA-A--GCACCTAAT-TA---C-ATGAC--CTTC-A---A-TATC-----AT-TG--AT-AACGGAATATAC--GC--G-A---------------TATAAATA---GATTACTAGT-AA----C-ATT-TATTTTAC-ATGCAATGTAAAAAAACTTATGCACTGCACTACT-GCATCATTGA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAA
gi|1 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaTT-----T--G--AAAAAAT-TCAGTTTAATTGTA--AACAAA-CC-TTAATG--T-ATC-TAGTTT----CTGCC-AA----AG--TA--------A--------AC------A-ATATTTG------TC-TCTTCCAAA-AA-TCAAGA-TAAA-----------A-G---TTT-----A-AG---T---AACCAC-------------AT--GCGGATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---TTCCTTACGC------TTACACG-----TAAT--------GCAT----TTA-CAAACAAGAAGCACTTTA------------ATTTGAGTA---TTA--TAT-AC--AT-G---T--AAATT-GTTTATTTC--TA-AA-------------TA-AG---------------------------AT------------AAG-ACA----TAAT-----ATTCAAAA----TCATG---TG--TCTT-AACCTGTCGT--AT-AG-TCAGTGCCCGTGTTAGATCCTAGGAGGTTCGTTTGAGTTGGAGTCCTGCCAA--TGTGCAT-AGCTTCGATTCGTT---AAACCTCGCCTCGGA-TG-TAA---CTTTGATGATAAGGCTAATTG---------TT-GTTGAAGGT-CGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaatttttgaaaaaattcagtttaattgtaaacaaaccttaatgtatctagtttctgccaaagtaaacaatatttgtctcttccaaaaatcaagataaaagtttaagtaaccacatgcggatacatatcctttttaattcttttccttacgcttacacgtaatgcatttacaaacaagaagcactttaatttgagtattatatacatgtaaattgtttatttctaaataagataagacataatattcaaaatcatgtgtcttaacctgtcgtatagtcagtgcccgtgttagatcctaggaggttcgtttgagttggagtcctgccaatgtgcatagcttcgattcgttaaacctcgcctcggatgtaactttgatgataaggctaattgttgttgaaggtcggtattagaagcaagacgcacgggttttacaaaacga
gi|10 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaagagctaaatgttgtcaaacatacaatatgcaaactcagtaagaataaatacatttaaaaggaatctgaagaaaaattattcatatgcatgtaacacgaacatttaaaaccaaaatcagtgaattttcaaaactaaatgaagacgcacatgtatgacatttcaatgtagttacctacatacataatatgaatacacacatgtttagattaaattaatttgtacatttggctggagggggggggggggtgacaaaaatgttaaacaagcacctaattacatgaccttcaatatcattgataacggaatatacgcgatataaatagattactagtaacatttattttacatgcaatgtaaaaaaacttatgcactgcactactgcatcattgattgctgttcattgaaattccttatcaaatattttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaattA-ATGTT--A-C--A--GCACCTACC-TA---G-GTGAC--CTTCAAG--ATTATT----AAT-AGA-ATAA-------ATAT--GCTTGCACTTGATTGGGAAAATTA-AAATA---GA--AGTAT--------C-ATT-CATTTTAC-ATa
gi|10 : gCACCTACC-TA---G-GTGAC--CTTCAAG--ATTATT----AAT-AGA-ATAA-------ATAT--GC--nnnnnnnnnnnnnnnnnnncacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|11 : gaatgttacagcacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgattgggaaaattaaaatagaagtatcattcattttacatnnnnnnnnnnnnnnnnnnnTT-----C--G--ATAAA-T-ATAACTAGATTGCC--AACAAC-CC-TTG-TG--TTATC-TAGTCT-------------------------------------------------------G------TC-CATTCCACA-GACTCAAGA-TTAA-----------ttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|12 : actttcatatttaataatctcataaacaaattctatTCATATATTGATT-----TTGA--AAAAA-A-TCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-CA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAtcaattgaacctactttcagttatttcatatgcaagcatttcgtctctatgtctctaaaaaaataggtgggagacgtctatttacattacaatatgtattttataattcag
gi|12 : atgtattacttataatcC--CTT--AG--A-GACT----AAT-AG--AGAA-------ATGCTTGC--ATA---------------TG-AAATATT-GA--AGTAGT-CA----A-ATT-GATTTTAtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctattagtctctaaggattatatgacagacatagcctgtttacatta
gi|13 : atgtattacttataatctcatatattgattttgaaaaaaatcaattagatgtacaaacaaaccctttgtatatatttttctgcccaaataacaatttaaacaatgtgtgtcccttccacaga-ATG------TAT--AGCCTT-------TT---AAA----------------------TCCATT---T---TTGCAT------G-ACACA-----TAAT--------GCA---------CAAA--AGAAGCAAAT-A------------TTTC-AATG-A-CGA--TAT-AC-------------GA-CTGTTTG-TTC--TA-AA-------------TA-AAT------------GTTTGTTTT----TAT------------AA--AC-----TA----------CAAGA----TCATG---CA-ATCTT-G-CCTattatatgacagacatagcctgtttacatta
gi|14 : atgaaataaatttgattactatttcatacgtgaaaattttctctagtacgacttaggtgacttatgcTCATA----TATTGAACTT--G--AAAAA-AATCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-AA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAttgttttttt
gi|16 : cttataatctT-----A-G----C---AAC-AT-------------AC--ATG--TA------CAT----CCGT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACATG-----TAAT--------GCAT---TTT--CAAG--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ACATTTGTTTATT-C--TA-AA-------------TA-AATTGTTTGCTTGAAG------------TAT------------AAG-ACA----TAAT-AT--ATTTAAAA----TCATG---TG-CTCTT-A-CCTGCCtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctatagtctctaaggattatatgacagacatagcctgttacattacac
gi|17 : AACT--ACA----AGAAGAC-CACATA-T-TTG-A-T-TCTAATGTA--TA-CCTA-CATATCAGCAATCAGTG-ACT-A-TACACATAT-GTTTAGA-TAAATTAATCCT--TG-TACATTTGGC---AG----GAA-GGGGGGGGGGGTGTGACAAAAGATGTT--AGCAAA--GCACCTAAT-T----A-GTGACAACTTC-Attt
gi|18 : ttcATCCTAA-CGGT-CGT--GAGTTGGGGTCCTGCCAATGTGT-CATAAGCTTCG--TCA-----AA-ACTCA----GGACCG-T-AA-CATTTAATGATA-AG---ATTGTGGATTTCTTTTTTTCAATATTC--T-TTAGAAGCAAGTGACGC-ATTATGTTTTAAGTGATTTGGACCTAAAAACGGAGGCCCTatgat
gi|19 : A-TAT-G-TAACATGCTACAAAGTGGAA-TAAATAC-ATTTTTTTTAAAAG--AATT-TGAAGAA-AAA--GAA-AATTA-TATGCATG-CA----ACA-CAA-ACATTTACAA-C-AAAG-TCTGTGAA-TTTCAAAACA--AAACAATTAAAGAC-CACATA-T-TG
gi|2 : taAGA-CATAATGTTT--GTCCACA-ATACA-TAT-GGCAACAT----CAC-GTAAGA-TAAATACTATCT-----AAAAG--A-CTCTGAAGAA-AAATAGAA-AATCAATATGCATG-TA----ACA-CGA-ACAT-----A-CTAAAA-TCAGTGAAATTTCAAAACTAAAAA----TGAAAAC-CACATG-T---G-A-T-TC-AAT-TA--TAGC-TA-CATA-CAGTAAT-AGTGAA-T-AGCAC-CAC-T-GATTAGA-TAAATTAAT--TTATG-TACATATGGC---AGGGGTGGG-GGGGGGGG----GTGAC-AAA-ATGTT--A-C--AC-GCACCTAATGTA---AGGTGAC--CTTA-AG--A-TATT----GAT-AGGAAT-A-------ATAC--GC--GTA---------------TA-AAATAC--GA--AGTATC-TAGTACC-ATT-TATTTTACGATGCAATGT--AAAAACTTATGCA-TGCACTACTCGCATCA-TGA--TTG-CTGATTT-CA-TGAAATTCGCTTATC--AATATTTTAAA
gi|2 : aaTG----GATT-----T--GGAAAAAA-T-TCAGTTTAAT--TA--AACAA--CC-TTA-TGGTT-ATCCTATTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGTG------TCTCCTTCCAAAAGATTCAAGAATAAA-----------G-T---TTT-----A-A----T---GAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---C-CCTTACGC------T-ACAC------TAAT--------GC----ATTTATCAAA--AGAAGCACTT-A------------ATTT-AGTA-ATTGA--TAT-AC--AT-G---T--AAATTTGT---TTTC--TA-AA-------------T--AA-------------G------------TAT------------AAGAACA----TAAT-----ATTCAAAA----TCATAATTTG-CTCTT-A-CCTGTCGCGAATAAGCTCAGTGGCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTTTTAAA-TCTCGC-TC-GA-TGTTAAACCTTTTGATGATA-GGCTAATTGGTT------TTTGTTGAATGTTCGGTA-TAGAAGCAA--GACGCAA-CGGTTTTTA----------AC---AAAACGGAGGCCCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaattggatttggaaaaaattcagtttaattaaacaaccttatggttatcctattttttctgccaaaagtaaacaatatgtgtctccttccaaaagattcaagaataaagttttaatgacacatgtgatacatatcctttttaattcttcccttacgctacactaatgcatttatcaaaagaagcacttaatttagtaattgatatacatgtaaatttgttttctaaataagtataagaacataatattcaaaatcataatttgctcttacctgtcgcgaataagctcagtggccgtgttagatcctagaggtcgtgagttggagtcctgccaatgtcatagcttcgattcgttttaaatctcgctcgatgttaaaccttttgatgataggctaattggtttttgttgaatgttcggtatagaagcaagacgcaacggtttttaacaaaacggaggccct
gi|20 : aaagacataatgtttgtccacaatacatatggcaacatcacgtaagataaatactatctaaaagactctgaagaaaaatagaaaatcaatatgcatgtaacacgaacatactaaaatcagtgaaatttcaaaactaaaaatgaaaaccacatgtgattcaattatagctacatacagtaatagtgaatagcaccactgattagataaattaatttatgtacatatggcaggggtggggggggggggtgacaaaatgttacacgcacctaatgtaaggtgaccttaagatattgataggaataatacgcgtataaaatacgaagtatctagtaccatttattttacgatgcaatgtaaaaacttatgcatgcactactcgcatcatgattgctgatttcatgaaattcgcttatcaatattttaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaatT-A------------ATTC-AGTG-A-TGA--TAG--------G---T--ATATTTGTTTATT-C--TA-AA-------------CATAA-------------GCTTTGCTTGACCTAT------------AAG-ACA----TAATAG---ATTTAAAA----TCATG---TGATTCTTGA-CCGGTCACA-GT-AGGTCAGTG
gi|21 : a----C-ATT-CATTTCAC-ATGCAATGT--AAAAACTCCTGCA-TGAAATACgtggagtgttcgcttcataa
gi|22 : cTTT-AGTA-A-TGA--TAT-AC--AT-G---T--AAATTTGTTTA----------A-------------TATAA-------------G------------TAT------------AAG-ACA----TAAT-----ATTCAAAC----TCATG---TG-CGCTT-A-CCTGTCGCG-AT-AGCTCAGCGCACGTGTTAGATCCTAG-AGGT-CGT--GAGTataatgcaaaatgctatagttaataaataactaaacgtcttggtaacaagtgactgttcttggtaatttcaattcagattgctttct
gi|23 : AATGCATTCTG-CA-A-TAGAGCATAAT-GTT--GTCAAAA-ATACA-TGT-G-TAAAAT----CA--GTAGGA-TAAATA
gi|25 : ctgggttaatttgtatacatttttgcttataaatgaagcagtaatataaaataa-TCCATTAGAT-GTG--GACAAA-CCCTTT-TG--T-AAC-TATTTTTTT-CTGCA-AATATCAACTTA--------A--------AC------A-ATATGTACTAGTATC-CCTTCCATA-GACTCAAGA-TAAA-----------
gi|26 : agA-ATGTT--A-C--A--GCACC-----TA---A-GTGAC--CTTCAAG--C-TATT----AAT-AG--AA-G-------ATAtacaacatttctttca
gi|28 : cT-A------------ATTC-AGCG-A-TGA--TAT--------G---T--ATATTTGTTTGTT-C--TA-AACAAAATGTTTGCTTA-AA-------------C------------TAT------------AAG-ACA----AGAT-AT--ATTTAAAA----TGATG---TG-GTCTT-G-CCTtatgcttgcacttggtttgctacattgaaaggatggggaaatcaaaatagaagtaccattcattt
gi|29 : tatttaAAAA-ATGTT--A-C--A--GCACCTAA---------GTGAC--CTTCCAG--A-TATT----AAT-A----T-A-------ATGA--AT--AGA---------------TA-AAATA---GA--AGTAC--------C-ATT-TATTTTAT-ATGCAATGT--AAAAACTTATGCA-TGAAATAttgtttctt
gi|3 : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTACGA-TAA-TAC-ATTT-----AAAAA--A-TCCTGACGGACAAAT-GAATAATCA-TAT-CATGGTA----ACAACGA--CATTTAAGA-C-AAAA-TCAGTGGA-ATTCAAAACT--AAA----TGCAGAC-CACATA-T-TGA-A-T-TC-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-TTA-CACACATAT-GTTTCGA-TAAATTAAT--T--TG-TACTTTCGGC---AG----GAG-GGGGAAGG----GTGACAAAA-ATGTT--A-C--A--GCACCTAAT-TA---A-GTGAC--CTTC-AG--A-TATT----GAT-AG--AT-A-------ATAC--GT--GTA---------------TA-AAATA---GA--AGTACTATA----CCATT-TATTTTAC-ATGCAATGT--AAAAACTTA-GCA-TGTAATACT-GCATCA-TGA--TTG-CTG--TT-CA-TGAA-TTC-CTTATC-AAATATTTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAA--T-TCAGTTAAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AG--TA--------A--------AC------A-ATATGTG------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------G-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCATAAATTTA-CAAA--AGATGCACTT-A------------ATTT-AGTATG-TGA--TAT-AC--AT-G---T--AAATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAG-ACA----TAAT-----ATTCAAAA----TCATG---TG-CTCTT-A-CCTGTCGCG-AT-A-CT-AGTGCCC--GTTAGATCCTAG-AGTT-CGTG-GAGTTGGAGTCCTGCCAA--TGT-CAT-AGC--------------AA-CCTCGCATCGGA-TG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGGAGGTCCT
gi|31 : T-A------------ATTC-AGCG-A-TGA--TAT-GT--AC-G--------ATTTGTTTTGTTC--TA-AACAAAATGTTTGCTTA-AA-------------C------------TAT------------AAG-ACA----AGAT-AT--ATTTAAAA----TGATG---TG-GTCTT-G-CCT
gi|33 : AATGCATTCTGTT--A-TAGAGCATAAT-GTT--GTCAACA-ATACC-TAT-G-CAAC--------------------ATAC-ATTT-----AAAAGA-A-TC-TGAAGAA-AAA--GAA-ttgtttctt
gi|34 : --TA--------A--------AC------A-ATGTGTG------TC-CCTTCCACA-GACTCAATA-TAAA-----------A-T---
gi|35 : aactATCA-TATGCATG--A----ACA-CGA-ACATT-AAAA-C-AAAA-TCAGTG--------AAAC---AAA----TGAAGAC-CACATATT-TGA-A-T-TC-AATGTA--Tcaatttgaacgctaccttggtattttattatatg
gi|36 : A-CG-TAAA-CTTTCGATGATA-AGCTAATTG---------TTTCTTCAATATTCGGTATTAGAACCAA--GACGC-A-CGGGTTTTA----------gt
gi|38 : TG-T--AATAGAGCATAATG------TCAAAA-ATACA-TAT-G-TAAAAT----CA--ATAGGA-TAAATAcg
gi|39 : TCTT--CTGCC-AA----AA--TATCAAGTAAA--------AC------A-ATCTGTA------TC-CTTTCCACA-G
gi|4 : ac-T--A-TAGACCATAATGTTT--GTCAGCATGTA-A-CAT-G-CTATAAA---CA--GTAGGA-TAAATAT-ATTT-----TAAAGA-A-TT-TGAAG-A-AAAC-GAA-AACCA-TATGCACG-CAACACACA-CAA-ACATTTAA-----AAAA-TCTGTGAA-TTTCAAGACA--AAA----TAAAGAC-CACATA-T-TGA-A-TATG-ATTGTT--AA-T-TAGCACA-CACTAATAAATG-C-T-A-AACACA
gi|4 : tatattgt--AAG----TGGATAT-CACATA-C----------C-ACTGTA--TC-C-TA-CACA-CAGCAAT-A----------CACACAGAT-GTTTAGA-CTAATTAAC--T--AG-TACACTTgcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|4 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacA----AATT-----T--G--TAAAA-T-TTAATTACAT-GTA--AAC----CC-TT--TG--T-ATC-TAGTTTTTTTCTGTC-AA----AA--TA--------A--------CC------ACATAAACAA-----TG-CCTTCCACA-GACTCAAGA-TAAA-----------A-TCAATTT-----G-AACCCT---ATT-TC-------------AT--GTGCACG------CAT---TTCTT-------TC---TAAGGACTAGTCGACAGACATAGCGTTT-TTTAAT-TCTTTCCT------T-TCACGACACATAAT--------G--T--ATCT--------AGAAGCACTC-A------------ATTA-AGTA-T-TGA--T-------AT-G---T--A------TTTATTTC--AA-AA-------------TA-AA-------------A------------TGTTTGTTTGACTAAAAA-ACA----TAATAG---ATTTAAAA----TCATG---TG-ATCTT-G-CATGTtgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|5 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaACACATATCATTTAGA-ACAATTAAT--T--TGGTACAGTTGGC---------GAGTGGGGGGGG----GTTACAAAA-CT-------T--A--ACATCTAA---------GTCAC--CTTC-AAGAA-TAT-----AATGAG--A--A-------A---------GT----------------TA-AAATATTAGA--AGTAGT-------C-ATTCTATT--AC-ATGCAATGT--AAAAACTTATGCA-TGAAATTAT-GCCTTG-CAAATTTGCCTG--TT-TATTGCAATAA-CTTA---AAA-ATCTTGAaccttcgtttctt
gi|5 : gcttACT-GCATCA-TAA--TTG-CTG--TTTCA-TGAAATTC-CTTATCAAAATATTTTAAcaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|5 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagTT-----T--G--AAAAA-T-TCAGTTTAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGT-------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------AGT---TTG-----A-A----T---AAC-AC-------------AT--GTG-ACA-------AT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC--------ACACG-----TAAT--------GC----ATTTA-C-AA--AGAAGCACTT-A------------TTAT-AGT--A-TTA--T-T-ACG-AT-G---CTAACATTTTTTTAT-----AA-AA-------------T--AA-------------G------------TAT------------AA--ACAAGGTTAAT-ACCTATTCAACATTATTTATG---TGCATCTT-ACCCTGTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|6 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgatGCATTCTG-TTAA-TA-ACAATAA--ATTTGGTCAACAGATACA-TATCG-CAACAT----CA--GTAG-A-TAA-TAC-AT-------AAAAG--A-TC-TGAAGAA-AAA--AAA-AATCA-TATGCATGGTA----AC--CGACAGATTTAAAA-A-AAAAATCAGTAAG-TTTTAAAACT--AAA----TG-AGAA-CACATA-C-TGA-A-T-TC-AAT-T---TA-C-TA-TATA-TAGC---------A-T-A-CAC-CATAT-G-TTAGA-TAAA-TAAT--T--TGTTACATTTGGC---A----------AGGGGGG----GTGACAATA-ATGTTC-A-C--GATGCACCTAAT-TAATTA-GTGAC--CTTCAAG--A-TATTTTAAAAT-AGA-ATAA-------ATAT--AC--GTG---------------T----ATA---GA--AGTAC--------C-ATT-TATTTTAC-ATGCAATGT--AAAAACTT-TGCA-TGAAttttct
gi|7 : TT-----T--G--AAAAA-T-CCAATTTCGC-GTA--AACAAATCC-TTC-T---T-ATC-TAGTTTTT--CTTCC-GA----AA--TA--------ACTTAA---AC------A-ATGTGTG------TC-CCTTCCACA-TACTCAAGA-CAAA-----------A-A---TTTAAATGA-A----TTTGAAC-ACT------------AT--TTC-ATATGCAGGCAT--TTCTCTCCATGGATTAGATAACAGACATAGCC-----------TTC-TT---T-CCTTACACGACGTAT-ACATG-----TAATTTAGTACTGCAT--CTTTA-CTA----GAAGCACTT-ACTACATGTAGTAATTC-AGTA-A-TGAGTCATTACTAAT-GACAT--ACATTTGTTTATTCTAATA-AAATGTTTGCT----TG-AA-------------G------------TGT------------AAA-ACA----TAAT-GG--ATTTAAAG----GCATG---TG-ATCTT-A-CCT-TCGtatgtatgcttgcaaaatgctctagttattaaataactaaaaatcttggacaacaacttgacatattctgctaatttcaattcagattgttttctctgaattacatcaacatactggaacatggttgtacaaatgtatttgcaataatgtcaactattctgttatcgcgctattt
gi|8 : atttacacttcaaagtatatcttatatataatctcatagacaaattgatTT-----T--G--AAAA--T-TCAATTTAGT-GTA--CCCAAT-CC-T-A-TA--T-ATC-TAGTTTCT---TGCCCAA----AA--TA--------A--------CCTTAAAAA-ATATGTG------TC-CTTTAAA-A-GATGCAAGA-TAGAATTTTGAACATA-T---TTT-----ATA----TGCAAAC-ATTTTTTCTCTAAGGATAAGTA-ACA------TATGTATCCTG-------TT---TAA----------------------TTC-TT---T-CCCTACGC------T-GCACG-----CAAT--------GT-T--ATTT--CCAA--GGAACCACTT-A------------GTTC-ATTA-A-TGA--T-T-AG--ATAG---C--ACATATG-CTAATTC--TAGAA-------------TA-GAATGTTTGCTTGTTG------------TAT------------AAG-ACA----TAATAG---AATTAAAA------ATA---AGATTCTT-A-CCTgttc
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCAGCAACACAACAACATTTAAAAAAAATTGTGATTCCAGAACAACACACAGTCACATTAATATTAAAACAGAATAGATACAATAATACTACACGCGCTAAAGATGGCAAGTAGTAAAATATTACAATGAGTATAACTACACACACACATACACACAAGCAATGACATACAAGGTTTGGAGTAATAAATTGTAAGCTTGCAGGATATTTGACAAATCTTGCAGCATCTTTCAAGTTGTTAATAATGAGAAATTCTTGCATTTGAATGGTTGCCTTGAAAAAGAAAGGGAAATCAGACAAAAATGTCATTCATT
Unaligned ( gi|15 ): TATAGACAGGCAACACACCCAAAGAACGAAAACAAAACAATTCAAAGATTGCATCTTAAATCAAAATGAATGACTGTCAATACACATACAAATAAATATTACACACATCAACACACATACAAATAAATACTACACGCAGCAATACACAAATAAATACTACACACAGCAACACACATACA
Unaligned ( gi|24 ): GTGGGGGGGGGGAGGGGGTGGTAAAAGATATTTGTTTAAGCGGCAGGCACCTATTTGATTTTTATCGTTGAAGGGGGTATACTATGAAGATGACATATGCTTTAACATTTTTTTAT
Unaligned ( gi|27 ): GCTGCATTAATTTGTATGAGCTTTTTGCTATTGAGTGAAGCAGTATAATAAAATATACTAAAATACATGCTATTTTTGAGCAGAATGTTGTCCACATACATAATATGTAA
Unaligned ( gi|30 ): ATATTACATACAACGAAATATTACACATAGCAATACACAATCAAACAAATATTACACACAAGAATACGCATTTAAATAAATTACACAAACAGCAATACAAACACAA
Unaligned ( gi|32 ): ACATTTGCATTAATGTCGCATATTCTGTTTATCTGCTATTCAAGTTCAAAGGCAGACGCATCAGTACTTGATGTCTCATGAATTCATTATGAAATATTTAAG
Unaligned ( gi|37 ): AAGAACCATTCACTTTACATATATGAAATATGTATGCTTGCAAAATGTTGTAGTTAATAAATAAGTAAA
Unaligned ( gi|40 ): ATTGTTGACCAGTCACGGTAGGTCAGTGGTAGAGAGCTCCGTAA
Unaligned ( gi|41 ): TGCATTTGCGTTAATGTCAACATATTCTGTTTACCTGCTATT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 111 1 1111 11 11111 2222 11 1111111 1 1 333333333333 222222222 1111 11111111 11111111 1 11 111111 33333333333333333333333333 222 444444444 11 11 11 111111111111111111111111111111111111111111111111111111111111111 1111 11111 11 11 33333333333333333 111111 3333333333333333333333333333333333333333333333333333333 111111 111 1111111 6666666666666666666666 11111111 11111 222222222222222 11 111111111111 1111111 99999999999999999999999999999999999999999999 111111111111 444444 11 11 11 11 1 1 3333333333 11 22 444444444 11 44444444444 111
lowQualScore : 6666 6 2 333 66 0 4 4 4 0 3333 00 0 4 1 5 0 44444 1111 5 0 5 99 5 5 6666666 5 5 1 3 1 5 0 5 5 999 9999 4 4 77777 5 5 5 2 777 5 1 5 5 0 111111111111 3 5 5 77 77 5 5 111111111 777 4444 4 4 66666666 88888888 55 4 5555 8 8888 44 33 44 111111 66666666666666666666666666 0 000 66 888888888 4 5 77 1 5 1 8 8 11 8 11 8 11 8 0 88 0 666666666666666666666666666666666666666666666666666666666666666 7777 00000 55 55 4 3 22 7 00 55 3 88 55 3 3 3 0 77 3 7777 00 44444444444444444 888888 3 111111 3 2 3 1 4 4444444444444444444444444444444444444444444444444444444 66 8 222222 000 4444444 777 0000000000000000000000 4 777 4 66666666 11111 888888888888888 44 4 666 3 777777777777 3 444 44 1111111 3 888888 5 6 3 44 3 11111111111111111111111111111111111111111111 555555555555 33 6666 111111 6666 555 11 3 6 11 8 5 2 8 8 99 33 0 0 3 5555555555 00 22 2 8 8 0 88 8 666666666 0 0 11 11 8 8 55555555555 777
lowQualScore : .... . . ... .. . . . . . .... .. . . . . . ..... .... . . . .. . . ....... . . . . . . . . . ... .... . . ..... . . . . ... . . . . . ............ . . . .. .. . . ......... ... .... . . ........ ........ .. . .... . .... .. .. .. ...... .......................... . ... .. ......... . . .. . . . . . .. . .. . .. . . .. . ............................................................... .... ..... .. .. . . .. . .. .. . .. .. . . . . .. . .... .. ................. ...... . ...... . . . . . ....................................................... .. . ...... ... ....... ... ...................... . ... . ........ ..... ............... .. . ... . ............ . ... .. ....... . ...... . . . .. . ............................................ ............ .. .... ...... .... ... .. . . .. . . . . . .. .. . . . .......... .. .. . . . . .. . ......... . . .. .. . . ........... ...
lowQualScore : 0000 7 5 666 99 0 4 4 4 1 9999 66 1 4 9 7 1 33333 7777 7 1 7 99 7 7 9999999 7 7 4 6 4 7 1 7 7 777 4444 4 4 44444 0 0 0 5 222 7 4 7 7 7 000000000000 2 7 7 99 99 7 7 888888888 777 2222 4 4 11111111 99999999 00 5 7777 0 5555 88 55 77 555555 88888888888888888888888888 1 666 99 222222222 4 0 99 4 7 6 0 0 00 0 00 0 44 0 8 88 8 000000000000000000000000000000000000000000000000000000000000000 0000 00000 55 55 0 6 88 3 00 88 6 22 00 6 6 6 4 99 3 1111 44 00000000000000000 888888 1 999999 1 8 1 4 0 9999999999999999999999999999999999999999999999999999999 99 9 888888 999 4444444 888 6666666666666666666666 4 888 4 33333333 11111 666666666666666 44 7 999 3 111111111111 1 111 22 5555555 1 555555 1 2 4 22 1 22222222222222222222222222222222222222222222 888888888888 22 5555 555555 5555 444 22 1 2 22 0 0 5 0 0 00 88 0 0 2 5555555555 22 55 5 0 0 8 88 0 000000000 8 8 66 00 0 0 66666666666 555
consensus : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG--A-TC-TGAAGAA-AAAT-GAA-AATCA-TATGCATG-TA----ACA-CGA-ACATTTAAAAC-AAAA-TCAGTGAA-TTT-CAAAACT--AAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-T-A-CACACATAT-GTTTAGAT-AAATTAAT--T--TG-T-ACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----AATA-G--A-TAA------ATAC--GC--G-TA---------------TAAAATA---GA--AGTA-CT-A----CATT-TATTTTAC-ATGCAATGTAAAAA--CTTATGCA-TGAAATACT-GCATCAT-GA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAAAANNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCAT--ATTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAG-ACA----TAAT--A---ATTCAAAA----TCATG---TG-NTCTT-A-CCTGTCGCG-AT-AGCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
Reference ( family-2589 ) : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG--A-TC-TGAAGAA-AAAT-GAA-AATCA-TATGCATG-TA----ACA-CGA-ACATTTAAAAC-AAAA-TCAGTGAA-TTT-CAAAACT--AAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-T-A-CACACATAT-GTTTAGAT-AAATTAAT--T--TG-T-ACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----AATA-G--A-TAA------ATAC--GC--G-TA---------------TAAAATA---GA--AGTA-NT-A----CATT-TATTTTAC-ATGCAATGTAAAAA--CTTATGCA-TGAAATACT-GCATCAT-GA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAAAANNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCAT--ATTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAG-ACA----TAAT--G---ATTCAAAA----TCATG---TG-NTCTT-A-CCTGTCGCG-AT-AGCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
gi|1 : AGAGC-TAAATGTT--GTCAAAC-ATACAATAT-G-CAAACT----CA--GTAAGAATAAATAC-ATTT-----AAAAGGAA-TC-TGAAGAA-AAAT-TAT---TCA-TATGCATG-TA----ACA-CGA-ACATTTAAAACCAAAA-TCAGTGAA-TTTTCAAAACT--AAA----TGAAGACGCACATG-TATGACAT-TTC-AATGTAGTTA-CCTA-CATA-CA-TAAT-A-TG-A---A-TACACACAT-GTTTAGATTAAATTAAT--T--TG-T-ACATTTGGCTGGAG----GGG-GGGGGGGG----GTGACAAAA-ATGTT-AAAC--AA-GCACCTAAT-TAC---ATGAC--CTTC-A----A-TATC----ATT--G--A-TAACGGAATATAC--GC--GATA---------------TAAA-TA---GATTACTA-GT-AA---CATT-TATTTTAC-ATGCAATGTAAAAAAACTTATGCACTGCACTACT-GCATCATTGA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAA
gi|1 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaTT-----T--G--AAAAAAT-TCAGTTTAATTGTA--AACAAA-CC-TTAATG--T-ATC-TAGTTT----CTGCC-AA----AG--TA--------A--------AC------A-ATATTTG------TC-TCTTCCAAA-AA-TCAAGA-TAAA-----------A-G---TTT-----A-AG---T---AACCAC-------------AT--GCGGATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---TTCCTTACGC------TTACACG-----TAAT--------GCAT----TTA-CAAACAAGAAGCACTTTA------------ATTTGAGTA---TTA--TAT-AC--AT-G---T--AAATT-GTTTATTTC--TA-AA-------------TA-AG---------------------------AT------------AAG-ACA----TAAT------ATTCAAAA----TCATG---TG--TCTT-AACCTGTCGT--AT-AG-TCAGTGCCCGTGTTAGATCCTAGGAGGTTCGTTTGAGTTGGAGTCCTGCCAA--TGTGCAT-AGCTTCGATTCGTT---AAACCTCGCCTCGGA-TG-TAA---CTTTGATGATAAGGCTAATTG---------TT-GTTGAAGGT-CGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaatttttgaaaaaattcagtttaattgtaaacaaaccttaatgtatctagtttctgccaaagtaaacaatatttgtctcttccaaaaatcaagataaaagtttaagtaaccacatgcggatacatatcctttttaattcttttccttacgcttacacgtaatgcatttacaaacaagaagcactttaatttgagtattatatacatgtaaattgtttatttctaaataagataagacataatattcaaaatcatgtgtcttaacctgtcgtatagtcagtgcccgtgttagatcctaggaggttcgtttgagttggagtcctgccaatgtgcatagcttcgattcgttaaacctcgcctcggatgtaactttgatgataaggctaattgttgttgaaggtcggtattagaagcaagacgcacgggttttacaaaacga
gi|10 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaagagctaaatgttgtcaaacatacaatatgcaaactcagtaagaataaatacatttaaaaggaatctgaagaaaaattattcatatgcatgtaacacgaacatttaaaaccaaaatcagtgaattttcaaaactaaatgaagacgcacatgtatgacatttcaatgtagttacctacatacataatatgaatacacacatgtttagattaaattaatttgtacatttggctggagggggggggggggtgacaaaaatgttaaacaagcacctaattacatgaccttcaatatcattgataacggaatatacgcgatataaatagattactagtaacatttattttacatgcaatgtaaaaaaacttatgcactgcactactgcatcattgattgctgttcattgaaattccttatcaaatattttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaattA-ATGTT-A--C--A--GCACCTACC-TAG---GTGAC--CTTCAA-G--ATTATT----AATA-GA-A-TAA------ATAT--GCTTG-CACTTGATTGGGAAAATTAAAATA---GA--AGTA-T-------CATT-CATTTTAC-ATa
gi|10 : gCACCTACC-TAG---GTGAC--CTTCAA-G--ATTATT----AATA-GA-A-TAA------ATAT--GC--nnnnnnnnnnnnnnnnnnncacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|11 : gaatgttacagcacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgattgggaaaattaaaatagaagtatcattcattttacatnnnnnnnnnnnnnnnnnnnTT-----C--G--ATAAA-T-ATAACTAGATTGCC--AACAAC-CC-TTG-TG--TTATC-TAGTCT-------------------------------------------------------G------TC-CATTCCACA-GACTCAAGA-TTAA-----------ttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|12 : actttcatatttaataatctcataaacaaattctatTCATATATTGATT-----TTGA--AAAAA-A-TCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-CA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAtcaattgaacctactttcagttatttcatatgcaagcatttcgtctctatgtctctaaaaaaataggtgggagacgtctatttacattacaatatgtattttataattcag
gi|12 : atgtattacttataatcC--CTT--A-G--A-GACT----AATA-G--A-GAA------ATGCTTGC--A-TA---------------TGAAATATT-GA--AGTA-GTCA----AATT-GATTTTAtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctattagtctctaaggattatatgacagacatagcctgtttacatta
gi|13 : atgtattacttataatctcatatattgattttgaaaaaaatcaattagatgtacaaacaaaccctttgtatatatttttctgcccaaataacaatttaaacaatgtgtgtcccttccacaga-ATG------TAT--AGCCTT-------TT---AAA----------------------TCCATT---T---TTGCAT------G-ACACA-----TAAT--------GCA---------CAAA--AGAAGCAAAT-A------------TTTC-AATG-A-CGA--TAT-AC-------------GA-CTGTTTG-TTC--TA-AA-------------TA-AAT------------GTTTGTTTT----TAT------------AA--AC-----TA-----------CAAGA----TCATG---CA-ATCTT-G-CCTattatatgacagacatagcctgtttacatta
gi|14 : atgaaataaatttgattactatttcatacgtgaaaattttctctagtacgacttaggtgacttatgcTCATA----TATTGAACTT--G--AAAAA-AATCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-AA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAttgttttttt
gi|16 : cttataatctT-----A-G----C---AAC-AT-------------AC--ATG--TA------CAT----CCGT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACATG-----TAAT--------GCAT---TTT--CAAG--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ACATTTGTTTATT-C--TA-AA-------------TA-AATTGTTTGCTTGAAG------------TAT------------AAG-ACA----TAAT--AT--ATTTAAAA----TCATG---TG-CTCTT-A-CCTGCCtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctatagtctctaaggattatatgacagacatagcctgttacattacac
gi|17 : AACT--ACA----AGAAGAC-CACATA-T-TTG-AT-T-CTAATGTA--TA-CCTA-CATATCAGCAATCAGTG-ACT-A-TACACATAT-GTTTAGAT-AAATTAATCCT--TG-T-ACATTTGGC---AG----GAA-GGGGGGGGGGGTGTGACAAAAGATGTT-AG-CAAA--GCACCTAAT-T-A---GTGACAACTTC-A-ttt
gi|18 : ttcATCCTAA-CGGT-CGT--GAGTTGGGGTCCTGCCAATGTGT-CATAAGCTTCG--TCA-----AA-ACTCA----GGACCG-T-AA-CATTTAATGATA-AG---ATTGTGGATTTCTTTTTTTCAATATTC--T-TTAGAAGCAAGTGACGC-ATTATGTTTTAAGTGATTTGGACCTAAAAACGGAGGCCCTatgat
gi|19 : A-TAT-G-TAACATGCTACAAAGTGGAA-TAAATAC-ATTTTTTTTAAAAG--AATT-TGAAGAA-AAA--GAA-AATTA-TATGCATG-CA----ACA-CAA-ACATTTACAAC-AAAG-TCTGTGAA-TTT-CAAAACA--AAACAATTAAAGAC-CACATA-T-TG
gi|2 : taAGA-CATAATGTTT--GTCCACA-ATACA-TAT-GGCAACAT----CAC-GTAAGA-TAAATACTATCT-----AAAAG--ACTC-TGAAGAA-AAATAGAA-AATCAATATGCATG-TA----ACA-CGA-ACAT-----ACTAAAA-TCAGTGAAATTT-CAAAACTAAAAA----TGAAAAC-CACATG-T---G-AT-T-C-AAT-TA--TAGC-TA-CATA-CAGTAAT-AGTGAA-T-AGCAC-CAC-T-GATTAGAT-AAATTAAT--TTATG-T-ACATATGGC---AGGGGTGGG-GGGGGGGG----GTGAC-AAA-ATGTT-A--C--AC-GCACCTAATGTAAG--GTGAC--CTTA-A-G--A-TATT----GATA-GGAA-T-A------ATAC--GC--G-TA---------------TAAAATAC--GA--AGTATCT-AGTACCATT-TATTTTACGATGCAATGTAAAAA--CTTATGCA-TGCACTACTCGCATCAT-GA--TTG-CTGATTT-CA-TGAAATTCGCTTATC--AATATTTTAAA
gi|2 : aaTG----GATT-----T--GGAAAAAA-T-TCAGTTTAAT--TA--AACAA--CC-TTA-TGGTT-ATCCTATTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGTG------TCTCCTTCCAAAAGATTCAAGAATAAA-----------G-T---TTT-----A-A----T---GAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---C-CCTTACGC------T-ACAC------TAAT--------GC----ATTTATCAAA--AGAAGCACTT-A------------ATTT-AGTA-ATTGA--TAT-AC--AT-G---T--AAATTTGT---TTTC--TA-AA-------------T--AA-------------G------------TAT------------AAGAACA----TAAT------ATTCAAAA----TCATAATTTG-CTCTT-A-CCTGTCGCGAATAAGCTCAGTGGCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTTTTAAA-TCTCGC-TC-GA-TGTTAAACCTTTTGATGATA-GGCTAATTGGTT------TTTGTTGAATGTTCGGTA-TAGAAGCAA--GACGCAA-CGGTTTTTA----------AC---AAAACGGAGGCCCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaattggatttggaaaaaattcagtttaattaaacaaccttatggttatcctattttttctgccaaaagtaaacaatatgtgtctccttccaaaagattcaagaataaagttttaatgacacatgtgatacatatcctttttaattcttcccttacgctacactaatgcatttatcaaaagaagcacttaatttagtaattgatatacatgtaaatttgttttctaaataagtataagaacataatattcaaaatcataatttgctcttacctgtcgcgaataagctcagtggccgtgttagatcctagaggtcgtgagttggagtcctgccaatgtcatagcttcgattcgttttaaatctcgctcgatgttaaaccttttgatgataggctaattggtttttgttgaatgttcggtatagaagcaagacgcaacggtttttaacaaaacggaggccct
gi|20 : aaagacataatgtttgtccacaatacatatggcaacatcacgtaagataaatactatctaaaagactctgaagaaaaatagaaaatcaatatgcatgtaacacgaacatactaaaatcagtgaaatttcaaaactaaaaatgaaaaccacatgtgattcaattatagctacatacagtaatagtgaatagcaccactgattagataaattaatttatgtacatatggcaggggtggggggggggggtgacaaaatgttacacgcacctaatgtaaggtgaccttaagatattgataggaataatacgcgtataaaatacgaagtatctagtaccatttattttacgatgcaatgtaaaaacttatgcatgcactactcgcatcatgattgctgatttcatgaaattcgcttatcaatattttaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaatT-A------------ATTC-AGTG-A-TGA--TAG--------G---T--ATATTTGTTTATT-C--TA-AA-------------CATAA-------------GCTTTGCTTGACCTAT------------AAG-ACA----TAATA-G---ATTTAAAA----TCATG---TGATTCTTGA-CCGGTCACA-GT-AGGTCAGTG
gi|21 : a----CATT-CATTTCAC-ATGCAATGTAAAAA--CTCCTGCA-TGAAATACgtggagtgttcgcttcataa
gi|22 : cTTT-AGTA-A-TGA--TAT-AC--AT-G---T--AAATTTGTTTA----------A-------------TATAA-------------G------------TAT------------AAG-ACA----TAAT------ATTCAAAC----TCATG---TG-CGCTT-A-CCTGTCGCG-AT-AGCTCAGCGCACGTGTTAGATCCTAG-AGGT-CGT--GAGTataatgcaaaatgctatagttaataaataactaaacgtcttggtaacaagtgactgttcttggtaatttcaattcagattgctttct
gi|23 : AATGCATTCTG-CA-A-TAGAGCATAAT-GTT--GTCAAAA-ATACA-TGT-G-TAAAAT----CA--GTAGGA-TAAATA
gi|25 : ctgggttaatttgtatacatttttgcttataaatgaagcagtaatataaaataa-TCCATTAGAT-GTG--GACAAA-CCCTTT-TG--T-AAC-TATTTTTTT-CTGCA-AATATCAACTTA--------A--------AC------A-ATATGTACTAGTATC-CCTTCCATA-GACTCAAGA-TAAA-----------
gi|26 : agA-ATGTT-A--C--A--GCACC-----TAA---GTGAC--CTTCAA-G--C-TATT----AATA-G--A--AG------ATAtacaacatttctttca
gi|28 : cT-A------------ATTC-AGCG-A-TGA--T-------AT-G---T--ATATTTGTTTG-TTC--TA-AACAAAATGTTTGCTTA-AA-------------C------------TAT------------AAG-ACA----AGAT--AT--ATTTAAAA----TGATG---TG-GTCTT-G-CCTtatgcttgcacttggtttgctacattgaaaggatggggaaatcaaaatagaagtaccattcattt
gi|29 : tatttaAAAA-ATGTT-A--C--A--GCACCTAA--------GTGAC--CTTCCA-G--A-TATT----AATATA--A-TGA------ATA-------G--A---------------TAAAATA---GA--AGTA-C-------CATT-TATTTTAT-ATGCAATGTAAAAA--CTTATGCA-TGAAATAttgtttctt
gi|3 : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTACGA-TAA-TAC-ATTT-----AAAAA--A-TCCTGACGGACAAAT-GAATAATCA-TAT-CATGGTA----ACAACGA--CATTTAAGAC-AAAA-TCAGTGGA-ATT-CAAAACT--AAA----TGCAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-TTA-CACACATAT-GTTTCGAT-AAATTAAT--T--TG-T-ACTTTCGGC---AG----GAG-GGGGAAGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----GATA-G--A-TAA-------TAC--GT--G-TA---------------TAAAATA---GA--AGTA-CT-ATAC-CATT-TATTTTAC-ATGCAATGTAAAAA--CTTA-GCA-TGTAATACT-GCATCAT-GA--TTG-CTG--TT-CAT--GAATTC-CTTATC-AAATATTTTAAAANNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G---AAAA-T-TCAGTTAAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AG--TA--------A--------AC------A-ATATGTG------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------G-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCATAAATTTA-CAAA--AGATGCACTT-A------------ATTT-AGTATG-TGA--TAT-AC--AT-G---T--AAATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAG-ACA----TAAT------ATTCAAAA----TCATG---TG-CTCTT-A-CCTGTCGCG-AT-A-CT-AGTGCCC--GTTAGATCCTAG-AGTT-CGTG-GAGTTGGAGTCCTGCCAA--TGT-CAT-AGC--------------AA-CCTCGCATCGGA-TG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGGAGGTCCT
gi|31 : T-A------------ATTC-AGCG-A-TGA--TAT-GT--AC-G--------ATTTGTTTTGTTC--TA-AACAAAATGTTTGCTTA-AA-------------C------------TAT------------AAG-ACA----AGAT--AT--ATTTAAAA----TGATG---TG-GTCTT-G-CCT
gi|33 : AATGCATTCTGTT--A-TAGAGCATAAT-GTT--GTCAACA-ATACC-TAT-G-CAAC--------------------ATAC-ATTT-----AAAAGA-A-TC-TGAAGAA-AAA--GAA-ttgtttctt
gi|34 : --TA--------A--------AC------A-ATGTGTG------TC-CCTTCCACA-GACTCAATA-TAAA-----------A-T---
gi|35 : aactATCA-TATGCATG--A----ACA-CGA-ACATT-AAAAC-AAAA-TCAGTG---------AAAC---AAA----TGAAGAC-CACATATT-TGA-AT-T-C-AATGTA--Tcaatttgaacgctaccttggtattttattatatg
gi|36 : A-CG-TAAA-CTTTCGATGATA-AGCTAATTG---------TTTCTTCAATATTCGGTATTAGAACCAA--GACGC-A-CGGGTTTTA----------gt
gi|38 : TG-T--AATAGAGCATAATG------TCAAAA-ATACA-TAT-G-TAAAAT----CA--ATAGGA-TAAATAcg
gi|39 : TCTT--CTGCC-AA----AA--TATCAAGTAAA--------AC------A-ATCTGTA------TC-CTTTCCACA-G
gi|4 : ac-T--A-TAGACCATAATGTTT--GTCAGCATGTA-A-CAT-G-CTATAAA---CA--GTAGGA-TAAATAT-ATTT-----TAAAGA-A-TT-TGAAG-A-AAAC-GAA-AACCA-TATGCACG-CAACACACA-CAA-ACATTTAA----AAAA-TCTGTGAA-TTT-CAAGACA--AAA----TAAAGAC-CACATA-T-TGA-ATAT-G-ATTGTT--AA-T-TAGCACA-CACTAATAAATG-C-T-A-AACACA
gi|4 : tatattgt--AAG----TGGATAT-CACATA-C----------C-ACTGTA--TC-C-TA-CACA-CAGCAAT-A----------CACACAGAT-GTTTAGAC-TAATTAAC--T--AG-T-ACACTTgcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|4 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacA----AATT-----T--G--TAAAA-T-TTAATTACAT-GTA--AAC----CC-TT--TG--T-ATC-TAGTTTTTTTCTGTC-AA----AA--TA--------A--------CC------ACATAAACAA-----TG-CCTTCCACA-GACTCAAGA-TAAA-----------A-TCAATTT-----G-AACCCT---ATT-TC-------------AT--GTGCACG------CAT---TTCTT-------TC---TAAGGACTAGTCGACAGACATAGCGTTT-TTTAAT-TCTTTCCT------T-TCACGACACATAAT--------G--T--ATCT--------AGAAGCACTC-A------------ATTA-AGTA-T-TGA--T-------AT-G---T--A------TTTATTTC--AA-AA-------------TA-AA-------------A------------TGTTTGTTTGACTAAAAA-ACA----TAATA-G---ATTTAAAA----TCATG---TG-ATCTT-G-CATGTtgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|5 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaACACATATCATTTAGAA-CAATTAAT--T--TGGT-ACAGTTGGC---------GAGTGGGGGGGG----GTTACAAAA-CT-------T--A--ACATCTAA--------GTCAC--CTTC-A-AGAA-TAT-----AAT--G--A-GAA------A---------G-T----------------TAAAATATTAGA--AGTA-GT------CATTCTATT--AC-ATGCAATGTAAAAA--CTTATGCA-TGAAATTAT-GCCTTGC-AAATTTGCCTG--TT-TATTGCAATAA-CTTA---AAA-ATCTTGAaccttcgtttctt
gi|5 : gcttACT-GCATCAT-AA--TTG-CTG--TTTCAT-GAAATTC-CTTATCAAAATATTTTAAcaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|5 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagTT-----T--G--AAAAA-T-TCAGTTTAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGT-------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------AGT---TTG-----A-A----T---AAC-AC-------------AT--GTG-ACA-------AT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC--------ACACG-----TAAT--------GC----ATTTA-C-AA--AGAAGCACTT-A------------TTAT-AGT--A-TTA--T-T-ACG-AT-G---CTAACATTTTTTTAT-----AA-AA-------------T--AA-------------G------------TAT------------AA--ACAAGGTTAAT--ACCTATTCAACATTATTTATG---TGCATCTT-ACCCTGTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|6 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgatGCATTCTG-TTAA-TA-ACAATAA--ATTTGGTCAACAGATACA-TATCG-CAACAT----CA--GTAG-A-TAA-TAC-AT-------AAAAG--A-TC-TGAAGAA-AAA--AAA-AATCA-TATGCATGGTA----AC--CGACAGATTTAAAAA-AAAAATCAGTAAG-TTT-TAAAACT--AAA----TGA-GAA-CACATA-C-TGA-AT-T-C-AAT-T---TA-C-TA-TATA-TAGCA----------T-A-CAC-CATAT-GTT-AGAT-AAAT-AAT--T--TG-TTACATTTGGC---AA----G------GGGGG----GTGACAATA-ATGTTCA--C--GATGCACCTAAT-TAATTAGTGAC--CTTC-AAG--A-TATTTTAAAATA-G--AATAA------ATAT--AC--G-TG---------------TA---TA---GA--AGTA-C-------CATT-TATTTTAC-ATGCAATGTAAAAA--CTT-TGCA-TGAAttttct
gi|7 : TT-----T--G--AAAAA-T-CCAATTTCGC-GTA--AACAAATCC-TTC-T---T-ATC-TAGTTTTT--CTTCC-GA----AA--TA--------ACTTAA---AC------A-ATGTGTG------TC-CCTTCCACA-TACTCAAGA-CAAA-----------A-A---TTTAAATGA-A----TTTGAAC-ACT------------AT--TTC-ATATGCAGGCAT--TTCTCTCCATGGATTAGATAACAGACATAGCC-----------TTC-TT---T-CCTTACACGACGTAT-ACATG-----TAATTTAGTACTGCAT--CTTTA-CTA----GAAGCACTT-ACTACATGTAGTAATTC-AGTA-A-TGAGTCATTACTAAT-GACAT--ACATTTGTTTATTCTAATA-AAATGTTTGCT----TG-AA-------------G------------TGT------------AAA-ACA----TAAT--GG--ATTTAAAG----GCATG---TG-ATCTT-A-CCT-TCGtatgtatgcttgcaaaatgctctagttattaaataactaaaaatcttggacaacaacttgacatattctgctaatttcaattcagattgttttctctgaattacatcaacatactggaacatggttgtacaaatgtatttgcaataatgtcaactattctgttatcgcgctattt
gi|8 : atttacacttcaaagtatatcttatatataatctcatagacaaattgatTT-----T--G--AAAA--T-TCAATTTAGT-GTA--CCCAAT-CC-T-A-TA--T-ATC-TAGTTTCT---TGCCCAA----AA--TA--------A--------CCTTAAAAA-ATATGTG------TC-CTTTAAA-A-GATGCAAGA-TAGAATTTTGAACATA-T---TTT-----ATA----TGCAAAC-ATTTTTTCTCTAAGGATAAGTA-ACA------TATGTATCCTG-------TT---TAA----------------------TTC-TT---T-CCCTACGC------T-GCACG-----CAAT--------GT-T--ATTT--CCAA--GGAACCACTT-A------------GTTC-ATTA-A-TGA--T-T-AG--ATAG---C--ACATATG-CTAATTC--TAGAA-------------TA-GAATGTTTGCTTGTTG------------TAT------------AAG-ACA----TAATAGA---ATTAAAAA----TAAGA---T---TCTT-A-CCTgttc
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCAGCAACACAACAACATTTAAAAAAAATTGTGATTCCAGAACAACACACAGTCACATTAATATTAAAACAGAATAGATACAATAATACTACACGCGCTAAAGATGGCAAGTAGTAAAATATTACAATGAGTATAACTACACACACACATACACACAAGCAATGACATACAAGGTTTGGAGTAATAAATTGTAAGCTTGCAGGATATTTGACAAATCTTGCAGCATCTTTCAAGTTGTTAATAATGAGAAATTCTTGCATTTGAATGGTTGCCTTGAAAAAGAAAGGGAAATCAGACAAAAATGTCATTCATT
Unaligned ( gi|15 ): TATAGACAGGCAACACACCCAAAGAACGAAAACAAAACAATTCAAAGATTGCATCTTAAATCAAAATGAATGACTGTCAATACACATACAAATAAATATTACACACATCAACACACATACAAATAAATACTACACGCAGCAATACACAAATAAATACTACACACAGCAACACACATACA
Unaligned ( gi|24 ): GTGGGGGGGGGGAGGGGGTGGTAAAAGATATTTGTTTAAGCGGCAGGCACCTATTTGATTTTTATCGTTGAAGGGGGTATACTATGAAGATGACATATGCTTTAACATTTTTTTAT
Unaligned ( gi|27 ): GCTGCATTAATTTGTATGAGCTTTTTGCTATTGAGTGAAGCAGTATAATAAAATATACTAAAATACATGCTATTTTTGAGCAGAATGTTGTCCACATACATAATATGTAA
Unaligned ( gi|30 ): ATATTACATACAACGAAATATTACACATAGCAATACACAATCAAACAAATATTACACACAAGAATACGCATTTAAATAAATTACACAAACAGCAATACAAACACAA
Unaligned ( gi|32 ): ACATTTGCATTAATGTCGCATATTCTGTTTATCTGCTATTCAAGTTCAAAGGCAGACGCATCAGTACTTGATGTCTCATGAATTCATTATGAAATATTTAAG
Unaligned ( gi|37 ): AAGAACCATTCACTTTACATATATGAAATATGTATGCTTGCAAAATGTTGTAGTTAATAAATAAGTAAA
Unaligned ( gi|40 ): ATTGTTGACCAGTCACGGTAGGTCAGTGGTAGAGAGCTCCGTAA
Unaligned ( gi|41 ): TGCATTTGCGTTAATGTCAACATATTCTGTTTACCTGCTATT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 111 1 1111 11 11111 2222 11 1111111 1 1 333333333333 222222222 1111 11111111 11111111 1 11 111111 33333333333333333333333333 222 11111 555555555 11 11 11 111111111111111111111111111111111111111111111111111111111111111 1111 11111 11 11 33333333333333333 111111 3333333333333333333333333333333333333333333333333333333 111111 111 1111111 6666666666666666666666 11111111 11111 222222222222222 11 111111111111 1111111 88888888888888888888888888888888888888888888888888888888 111111111111 333333333 11 11 11 11 1 1 3333333333 11 22 444444444 11 44444444444 111
lowQualScore : 6666 6 2 333 66 0 4 4 4 0 3333 00 0 4 1 5 0 44444 1111 5 0 5 99 5 5 6666666 5 5 1 3 1 5 0 5 5 999 9999 4 4 77777 5 5 5 2 777 5 1 5 5 0 111111111111 3 5 5 77 77 5 5 111111111 777 4444 4 4 66666666 88888888 55 4 5555 8 8888 44 33 44 111111 66666666666666666666666666 0 000 22222 000000000 4 5 77 1 5 1 8 8 11 8 11 8 11 8 0 88 0 666666666666666666666666666666666666666666666666666666666666666 7777 00000 55 55 4 3 22 7 00 55 3 88 55 3 3 3 0 77 3 7777 00 44444444444444444 888888 3 111111 3 2 3 1 4 4444444444444444444444444444444444444444444444444444444 66 8 222222 000 4444444 777 0000000000000000000000 4 777 4 66666666 11111 888888888888888 44 4 666 3 777777777777 3 444 44 1111111 3 888888 5 9 44 3 00000000000000000000000000000000000000000000000000000000 555555555555 3 6666 000000000 6666 555 11 3 6 11 8 5 2 8 8 99 33 0 0 3 5555555555 00 22 2 8 8 0 88 8 666666666 0 0 11 11 8 8 55555555555 777
lowQualScore : .... . . ... .. . . . . . .... .. . . . . . ..... .... . . . .. . . ....... . . . . . . . . . ... .... . . ..... . . . . ... . . . . . ............ . . . .. .. . . ......... ... .... . . ........ ........ .. . .... . .... .. .. .. ...... .......................... . ... ..... ......... . . .. . . . . . .. . .. . .. . . .. . ............................................................... .... ..... .. .. . . .. . .. .. . .. .. . . . . .. . .... .. ................. ...... . ...... . . . . . ....................................................... .. . ...... ... ....... ... ...................... . ... . ........ ..... ............... .. . ... . ............ . ... .. ....... . ...... . . .. . ........................................................ ............ . .... ......... .... ... .. . . .. . . . . . .. .. . . . .......... .. .. . . . . .. . ......... . . .. .. . . ........... ...
lowQualScore : 0000 7 5 666 99 0 4 4 4 1 9999 66 1 4 9 7 1 33333 7777 7 1 7 99 7 7 9999999 7 7 4 6 4 7 1 7 7 777 4444 4 4 44444 0 0 0 5 222 7 4 7 7 7 000000000000 2 7 7 99 99 7 7 888888888 777 2222 4 4 11111111 99999999 00 5 7777 0 5555 88 55 77 555555 88888888888888888888888888 1 666 55555 222222222 4 0 99 4 7 6 0 0 00 0 00 0 44 0 8 88 8 000000000000000000000000000000000000000000000000000000000000000 0000 00000 55 55 0 6 88 3 00 88 6 22 00 6 6 6 4 99 3 1111 44 00000000000000000 888888 1 999999 1 8 1 4 0 9999999999999999999999999999999999999999999999999999999 99 9 888888 999 4444444 888 6666666666666666666666 4 888 4 33333333 11111 666666666666666 44 7 999 3 111111111111 1 111 22 5555555 1 555555 1 9 22 1 11111111111111111111111111111111111111111111111111111111 888888888888 1 5555 555555555 5555 444 22 1 2 22 0 0 5 0 0 00 88 0 0 2 5555555555 22 55 5 0 0 8 88 0 000000000 8 8 66 00 0 0 66666666666 555
consensus : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG--A-TC-TGAAGAA-AAAT-GAA-AATCA-TATGCATG-TA----ACA-CGA-ACATTTAAAAC-AAAA-TCAGTGAA-TTT-CAAAACT--AAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-T-A-CACACATAT-GTTTAGAT-AAATTAAT--T--TG-T-ACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----AATA-G--A-TAA------ATAC--GC--G-TA---------------TAAAATA---GA-----AGTA-CT-A----CATT-TATTTTAC-ATGCAATGTAAAAA--CTTATGCA-TGAAATACT-GCATCAT-GA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAAAANNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCAT--ATTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-------------AA-------------G------------TAT------------AAG-ACA----TAAT--A---A--TTCAAAA----TCATG---TG-NTCTT-A-CCTGTCGCG-AT-AGCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
Reference ( family-2589 ) : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG--A-TC-TGAAGAA-AAAT-GAA-AATCA-TATGCATG-TA----ACA-CGA-ACATTTAAAAC-AAAA-TCAGTGAA-TTT-CAAAACT--AAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-T-A-CACACATAT-GTTTAGAT-AAATTAAT--T--TG-T-ACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----AATA-G--A-TAA------ATAC--GC--G-TA---------------TAAAATA---GA-----AGTA-CT-A----CATT-TATTTTAC-ATGCAATGTAAAAA--CTTATGCA-TGAAATACT-GCATCAT-GA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAAAANNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCAT--ATTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-------------AA-------------G------------TAT------------AAG-ACA----TAAT--A---A--TTCAAAA----TCATG---TG-NTCTT-A-CCTGTCGCG-AT-AGCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
gi|1 : AGAGC-TAAATGTT--GTCAAAC-ATACAATAT-G-CAAACT----CA--GTAAGAATAAATAC-ATTT-----AAAAGGAA-TC-TGAAGAA-AAAT-TAT---TCA-TATGCATG-TA----ACA-CGA-ACATTTAAAACCAAAA-TCAGTGAA-TTTTCAAAACT--AAA----TGAAGACGCACATG-TATGACAT-TTC-AATGTAGTTA-CCTA-CATA-CA-TAAT-A-TG-A---A-TACACACAT-GTTTAGATTAAATTAAT--T--TG-T-ACATTTGGCTGGAG----GGG-GGGGGGGG----GTGACAAAA-ATGTT-AAAC--AA-GCACCTAAT-TAC---ATGAC--CTTC-A----A-TATC----ATT--G--A-TAACGGAATATAC--GC--GATA---------------TAAA-TA---GATTACTAGTA----A----CATT-TATTTTAC-ATGCAATGTAAAAAAACTTATGCACTGCACTACT-GCATCATTGA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAA
gi|1 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaTT-----T--G--AAAAAAT-TCAGTTTAATTGTA--AACAAA-CC-TTAATG--T-ATC-TAGTTT----CTGCC-AA----AG--TA--------A--------AC------A-ATATTTG------TC-TCTTCCAAA-AA-TCAAGA-TAAA-----------A-G---TTT-----A-AG---T---AACCAC-------------AT--GCGGATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---TTCCTTACGC------TTACACG-----TAAT--------GCAT----TTA-CAAACAAGAAGCACTTTA------------ATTTGAGTA---TTA--TAT-AC--AT-G---T--AAATT-GTTTATTTC--TA-AA-------------TA-------------AG---------------------------AT------------AAG-ACA----TAAT--A------TTCAAAA----TCATG---TG--TCTT-AACCTGTCGT--AT-AG-TCAGTGCCCGTGTTAGATCCTAGGAGGTTCGTTTGAGTTGGAGTCCTGCCAA--TGTGCAT-AGCTTCGATTCGTT---AAACCTCGCCTCGGA-TG-TAA---CTTTGATGATAAGGCTAATTG---------TT-GTTGAAGGT-CGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaatttttgaaaaaattcagtttaattgtaaacaaaccttaatgtatctagtttctgccaaagtaaacaatatttgtctcttccaaaaatcaagataaaagtttaagtaaccacatgcggatacatatcctttttaattcttttccttacgcttacacgtaatgcatttacaaacaagaagcactttaatttgagtattatatacatgtaaattgtttatttctaaataagataagacataatattcaaaatcatgtgtcttaacctgtcgtatagtcagtgcccgtgttagatcctaggaggttcgtttgagttggagtcctgccaatgtgcatagcttcgattcgttaaacctcgcctcggatgtaactttgatgataaggctaattgttgttgaaggtcggtattagaagcaagacgcacgggttttacaaaacga
gi|10 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaagagctaaatgttgtcaaacatacaatatgcaaactcagtaagaataaatacatttaaaaggaatctgaagaaaaattattcatatgcatgtaacacgaacatttaaaaccaaaatcagtgaattttcaaaactaaatgaagacgcacatgtatgacatttcaatgtagttacctacatacataatatgaatacacacatgtttagattaaattaatttgtacatttggctggagggggggggggggtgacaaaaatgttaaacaagcacctaattacatgaccttcaatatcattgataacggaatatacgcgatataaatagattactagtaacatttattttacatgcaatgtaaaaaaacttatgcactgcactactgcatcattgattgctgttcattgaaattccttatcaaatattttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaattA-ATGTT-A--C--A--GCACCTACC-TAG---GTGAC--CTTCAA-G--ATTATT----AATA-GA-A-TAA------ATAT--GCTTG-CACTTGATTGGGAAAATTAAAATA---GA-----AGTA-T-------CATT-CATTTTAC-ATa
gi|10 : gCACCTACC-TAG---GTGAC--CTTCAA-G--ATTATT----AATA-GA-A-TAA------ATAT--GC--nnnnnnnnnnnnnnnnnnncacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|11 : gaatgttacagcacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgattgggaaaattaaaatagaagtatcattcattttacatnnnnnnnnnnnnnnnnnnnTT-----C--G--ATAAA-T-ATAACTAGATTGCC--AACAAC-CC-TTG-TG--TTATC-TAGTCT-------------------------------------------------------G------TC-CATTCCACA-GACTCAAGA-TTAA-----------ttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|12 : actttcatatttaataatctcataaacaaattctatTCATATATTGATT-----TTGA--AAAAA-A-TCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-CA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAtcaattgaacctactttcagttatttcatatgcaagcatttcgtctctatgtctctaaaaaaataggtgggagacgtctatttacattacaatatgtattttataattcag
gi|12 : atgtattacttataatcC--CTT--A-G--A-GACT----AATA-G--A-GAA------ATGCTTGC--A-TA---------------TGAAATATT-GA-----AGTA-GTCA----AATT-GATTTTAtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctattagtctctaaggattatatgacagacatagcctgtttacatta
gi|13 : atgtattacttataatctcatatattgattttgaaaaaaatcaattagatgtacaaacaaaccctttgtatatatttttctgcccaaataacaatttaaacaatgtgtgtcccttccacaga-ATG------TAT--AGCCTT-------TT---AAA----------------------TCCATT---T---TTGCAT------G-ACACA-----TAAT--------GCA---------CAAA--AGAAGCAAAT-A------------TTTC-AATG-A-CGA--TAT-AC-------------GA-CTGTTTG-TTC--TA-AA-------------TA-------------AAT------------G------------TTT--------------G-TTT----TTAT--A---AACTACAAGA----TCATG---CA-ATCTT-G-CCTattatatgacagacatagcctgtttacatta
gi|14 : atgaaataaatttgattactatttcatacgtgaaaattttctctagtacgacttaggtgacttatgcTCATA----TATTGAACTT--G--AAAAA-AATCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-AA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAttgttttttt
gi|16 : cttataatctT-----A-G----C---AAC-AT-------------AC--ATG--TA------CAT----CCGT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACATG-----TAAT--------GCAT---TTT--CAAG--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ACATTTGTTTA-TTC--TA-AA-------------TAAATTGTTTGCTTGAA-------------G------------TAT------------AAG-ACA----TAAT--AT--A--TTTAAAA----TCATG---TG-CTCTT-A-CCTGCCtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctatagtctctaaggattatatgacagacatagcctgttacattacac
gi|17 : AACT--ACA----AGAAGAC-CACATA-T-TTG-AT-T-CTAATGTA--TA-CCTA-CATATCAGCAATCAGTG-ACT-A-TACACATAT-GTTTAGAT-AAATTAATCCT--TG-T-ACATTTGGC---AG----GAA-GGGGGGGGGGGTGTGACAAAAGATGTT-AG-CAAA--GCACCTAAT-T-A---GTGACAACTTC-A-ttt
gi|18 : ttcATCCTAA-CGGT-CGT--GAGTTGGGGTCCTGCCAATGTGT-CATAAGCTTCG--TCA-----AA-ACTCA----GGACCG-T-AA-CATTTAATGATA-AG---ATTGTGGATTTCTTTTTTTCAATATTC--T-TTAGAAGCAAGTGACGC-ATTATGTTTTAAGTGATTTGGACCTAAAAACGGAGGCCCTatgat
gi|19 : A-TAT-G-TAACATGCTACAAAGTGGAA-TAAATAC-ATTTTTTTTAAAAG--AATT-TGAAGAA-AAA--GAA-AATTA-TATGCATG-CA----ACA-CAA-ACATTTACAAC-AAAG-TCTGTGAA-TTT-CAAAACA--AAACAATTAAAGAC-CACATA-T-TG
gi|2 : taAGA-CATAATGTTT--GTCCACA-ATACA-TAT-GGCAACAT----CAC-GTAAGA-TAAATACTATCT-----AAAAG--ACTC-TGAAGAA-AAATAGAA-AATCAATATGCATG-TA----ACA-CGA-ACAT-----ACTAAAA-TCAGTGAAATTT-CAAAACTAAAAA----TGAAAAC-CACATG-T---G-AT-T-C-AAT-TA--TAGC-TA-CATA-CAGTAAT-AGTGAA-T-AGCAC-CAC-T-GATTAGAT-AAATTAAT--TTATG-T-ACATATGGC---AGGGGTGGG-GGGGGGGG----GTGAC-AAA-ATGTT-A--C--AC-GCACCTAATGTAAG--GTGAC--CTTA-A-G--A-TATT----GATA-GGAA-T-A------ATAC--GC--G-TA---------------TAAAATAC--GA-----AGTATCT-AGTACCATT-TATTTTACGATGCAATGTAAAAA--CTTATGCA-TGCACTACTCGCATCAT-GA--TTG-CTGATTT-CA-TGAAATTCGCTTATC--AATATTTTAAA
gi|2 : aaTG----GATT-----T--GGAAAAAA-T-TCAGTTTAAT--TA--AACAA--CC-TTA-TGGTT-ATCCTATTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGTG------TCTCCTTCCAAAAGATTCAAGAATAAA-----------G-T---TTT-----A-A----T---GAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---C-CCTTACGC------T-ACAC------TAAT--------GC----ATTTATCAAA--AGAAGCACTT-A------------ATTT-AGTA-ATTGA--TAT-AC--AT-G---T--AAATTTGT---TTTC--TA-AA-------------T--------------AA-------------G------------TAT------------AAGAACA----TAAT------A--TTCAAAA----TCATAATTTG-CTCTT-A-CCTGTCGCGAATAAGCTCAGTGGCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTTTTAAA-TCTCGC-TC-GA-TGTTAAACCTTTTGATGATA-GGCTAATTGGTT------TTTGTTGAATGTTCGGTA-TAGAAGCAA--GACGCAA-CGGTTTTTA----------AC---AAAACGGAGGCCCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaattggatttggaaaaaattcagtttaattaaacaaccttatggttatcctattttttctgccaaaagtaaacaatatgtgtctccttccaaaagattcaagaataaagttttaatgacacatgtgatacatatcctttttaattcttcccttacgctacactaatgcatttatcaaaagaagcacttaatttagtaattgatatacatgtaaatttgttttctaaataagtataagaacataatattcaaaatcataatttgctcttacctgtcgcgaataagctcagtggccgtgttagatcctagaggtcgtgagttggagtcctgccaatgtcatagcttcgattcgttttaaatctcgctcgatgttaaaccttttgatgataggctaattggtttttgttgaatgttcggtatagaagcaagacgcaacggtttttaacaaaacggaggccct
gi|20 : aaagacataatgtttgtccacaatacatatggcaacatcacgtaagataaatactatctaaaagactctgaagaaaaatagaaaatcaatatgcatgtaacacgaacatactaaaatcagtgaaatttcaaaactaaaaatgaaaaccacatgtgattcaattatagctacatacagtaatagtgaatagcaccactgattagataaattaatttatgtacatatggcaggggtggggggggggggtgacaaaatgttacacgcacctaatgtaaggtgaccttaagatattgataggaataatacgcgtataaaatacgaagtatctagtaccatttattttacgatgcaatgtaaaaacttatgcatgcactactcgcatcatgattgctgatttcatgaaattcgcttatcaatattttaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaatT-A------------ATTC-AGTG-A-TGA--TAG--------G---T--ATATTTGTTTATT-C--TA-AA-------------CAT------------AA-------------GCTTTGCTTGACCTAT------------AAG-ACA----TAAT--AG--A--TTTAAAA----TCATG---TGATTCTTGA-CCGGTCACA-GT-AGGTCAGTG
gi|21 : a----CATT-CATTTCAC-ATGCAATGTAAAAA--CTCCTGCA-TGAAATACgtggagtgttcgcttcataa
gi|22 : cTTT-AGTA-A-TGA--TAT-AC--AT-G---T--AAATTTGTTTA----------A-------------TAT------------AA-------------G------------TAT------------AAG-ACA----TAAT--A------TTCAAAC----TCATG---TG-CGCTT-A-CCTGTCGCG-AT-AGCTCAGCGCACGTGTTAGATCCTAG-AGGT-CGT--GAGTataatgcaaaatgctatagttaataaataactaaacgtcttggtaacaagtgactgttcttggtaatttcaattcagattgctttct
gi|23 : AATGCATTCTG-CA-A-TAGAGCATAAT-GTT--GTCAAAA-ATACA-TGT-G-TAAAAT----CA--GTAGGA-TAAATA
gi|25 : ctgggttaatttgtatacatttttgcttataaatgaagcagtaatataaaataa-TCCATTAGAT-GTG--GACAAA-CCCTTT-TG--T-AAC-TATTTTTTT-CTGCA-AATATCAACTTA--------A--------AC------A-ATATGTACTAGTATC-CCTTCCATA-GACTCAAGA-TAAA-----------
gi|26 : agA-ATGTT-A--C--A--GCACC-----TAA---GTGAC--CTTCAA-G--C-TATT----AATA-G--A--AG------ATAtacaacatttctttca
gi|28 : cT-A------------ATTC-AGCG-A-TGA--T-------AT-G---T--ATATTTGTTTG-TTC--TA-AACAAAATGTTTGCTTA-------------AA-------------C------------TAT------------AAG-ACA----AGAT--AT--A--TTTAAAA----TGATG---TG-GTCTT-G-CCTtatgcttgcacttggtttgctacattgaaaggatggggaaatcaaaatagaagtaccattcattt
gi|29 : tatttaAAAA-ATGTT-A--C--A--GCACCTAA--------GTGAC--CTTCCA-G--A-TATT----AATATA--A-TGA------ATA-------G--A---------------TAAAATA---GA-----AGTA-C-------CATT-TATTTTAT-ATGCAATGTAAAAA--CTTATGCA-TGAAATAttgtttctt
gi|3 : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTACGA-TAA-TAC-ATTT-----AAAAA--A-TCCTGACGGACAAAT-GAATAATCA-TAT-CATGGTA----ACAACGA--CATTTAAGAC-AAAA-TCAGTGGA-ATT-CAAAACT--AAA----TGCAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-TTA-CACACATAT-GTTTCGAT-AAATTAAT--T--TG-T-ACTTTCGGC---AG----GAG-GGGGAAGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----GATA-G--A-TAA-------TAC--GT--G-TA---------------TAAAATA---GA-----AGTA-CT-ATAC-CATT-TATTTTAC-ATGCAATGTAAAAA--CTTA-GCA-TGTAATACT-GCATCAT-GA--TTG-CTG--TT-CAT--GAATTC-CTTATC-AAATATTTTAAAANNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G---AAAA-T-TCAGTTAAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AG--TA--------A--------AC------A-ATATGTG------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------G-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCATAAATTTA-CAAA--AGATGCACTT-A------------ATTT-AGTATG-TGA--TAT-AC--AT-G---T--AAATTTGTTTATTTC--TA-AA-------------TA-------------AA-------------G------------TAT------------AAG-ACA----TAAT------A--TTCAAAA----TCATG---TG-CTCTT-A-CCTGTCGCG-AT-A-CT-AGTGCCC--GTTAGATCCTAG-AGTT-CGTG-GAGTTGGAGTCCTGCCAA--TGT-CAT-AGC--------------AA-CCTCGCATCGGA-TG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGGAGGTCCT
gi|31 : T-A------------ATTC-AGCG-A-TGA--TAT-GT--AC-G--------ATTTGTTTTGTTC--TA-AACAAAATGTTTGCTTA-------------AA-------------C------------TAT------------AAG-ACA----AGAT--AT--A--TTTAAAA----TGATG---TG-GTCTT-G-CCT
gi|33 : AATGCATTCTGTT--A-TAGAGCATAAT-GTT--GTCAACA-ATACC-TAT-G-CAAC--------------------ATAC-ATTT-----AAAAGA-A-TC-TGAAGAA-AAA--GAA-ttgtttctt
gi|34 : --TA--------A--------AC------A-ATGTGTG------TC-CCTTCCACA-GACTCAATA-TAAA-----------A-T---
gi|35 : aactATCA-TATGCATG--A----ACA-CGA-ACATT-AAAAC-AAAA-TCAGTG---------AAAC---AAA----TGAAGAC-CACATATT-TGA-AT-T-C-AATGTA--Tcaatttgaacgctaccttggtattttattatatg
gi|36 : A-CG-TAAA-CTTTCGATGATA-AGCTAATTG---------TTTCTTCAATATTCGGTATTAGAACCAA--GACGC-A-CGGGTTTTA----------gt
gi|38 : TG-T--AATAGAGCATAATG------TCAAAA-ATACA-TAT-G-TAAAAT----CA--ATAGGA-TAAATAcg
gi|39 : TCTT--CTGCC-AA----AA--TATCAAGTAAA--------AC------A-ATCTGTA------TC-CTTTCCACA-G
gi|4 : ac-T--A-TAGACCATAATGTTT--GTCAGCATGTA-A-CAT-G-CTATAAA---CA--GTAGGA-TAAATAT-ATTT-----TAAAGA-A-TT-TGAAG-A-AAAC-GAA-AACCA-TATGCACG-CAACACACA-CAA-ACATTTAA----AAAA-TCTGTGAA-TTT-CAAGACA--AAA----TAAAGAC-CACATA-T-TGA-ATAT-G-ATTGTT--AA-T-TAGCACA-CACTAATAAATG-C-T-A-AACACA
gi|4 : tatattgt--AAG----TGGATAT-CACATA-C----------C-ACTGTA--TC-C-TA-CACA-CAGCAAT-A----------CACACAGAT-GTTTAGAC-TAATTAAC--T--AG-T-ACACTTgcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|4 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacA----AATT-----T--G--TAAAA-T-TTAATTACAT-GTA--AAC----CC-TT--TG--T-ATC-TAGTTTTTTTCTGTC-AA----AA--TA--------A--------CC------ACATAAACAA-----TG-CCTTCCACA-GACTCAAGA-TAAA-----------A-TCAATTT-----G-AACCCT---ATT-TC-------------AT--GTGCACG------CAT---TTCTT-------TC---TAAGGACTAGTCGACAGACATAGCGTTT-TTTAAT-TCTTTCCT------T-TCACGACACATAAT--------G--T--ATCT--------AGAAGCACTC-A------------ATTA-AGTA-T-TGA--T-------AT-G---T--A------TTTATTTC--AA-AA-------------TA-------------AA-------------A------------TGTTTGTTTGACTAAAAA-ACA----TAAT--AG--A--TTTAAAA----TCATG---TG-ATCTT-G-CATGTtgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|5 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaACACATATCATTTAGAA-CAATTAAT--T--TGGT-ACAGTTGGC---------GAGTGGGGGGGG----GTTACAAAA-CT-------T--A--ACATCTAA--------GTCAC--CTTC-A-AGAA-TAT-----AAT--G--A-GAA------A---------G-T----------------TAAAATATTAGA-----AGTA-GT------CATTCTATT--AC-ATGCAATGTAAAAA--CTTATGCA-TGAAATTAT-GCCTTGC-AAATTTGCCTG--TT-TATTGCAATAA-CTTA---AAA-ATCTTGAaccttcgtttctt
gi|5 : gcttACT-GCATCAT-AA--TTG-CTG--TTTCAT-GAAATTC-CTTATCAAAATATTTTAAcaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|5 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagTT-----T--G--AAAAA-T-TCAGTTTAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGT-------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------AGT---TTG-----A-A----T---AAC-AC-------------AT--GTG-ACA-------AT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC--------ACACG-----TAAT--------GC----ATTTA-C-AA--AGAAGCACTT-A------------TTAT-AGT--A-TTA--T-T-ACG-AT-G---CTAACATTTTTTTAT-----AA-AA-------------T--------------AA-------------G------------TAT------------AA--ACAAGGTTAAT--ACCTA--TTCAACATTATTTATG---TGCATCTT-ACCCTGTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|6 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgatGCATTCTG-TTAA-TA-ACAATAA--ATTTGGTCAACAGATACA-TATCG-CAACAT----CA--GTAG-A-TAA-TAC-AT-------AAAAG--A-TC-TGAAGAA-AAA--AAA-AATCA-TATGCATGGTA----AC--CGACAGATTTAAAAA-AAAAATCAGTAAG-TTT-TAAAACT--AAA----TGA-GAA-CACATA-C-TGA-AT-T-C-AAT-T---TA-C-TA-TATA-TAGCA----------T-A-CAC-CATAT-GTT-AGAT-AAAT-AAT--T--TG-TTACATTTGGC---AA----G------GGGGG----GTGACAATA-ATGTTCA--C--GATGCACCTAAT-TAATTAGTGAC--CTTC-AAG--A-TATTTTAAAATA-G--AATAA------ATAT--AC--G-TG---------------TA---TA---GA-----AGTA-C-------CATT-TATTTTAC-ATGCAATGTAAAAA--CTT-TGCA-TGAAttttct
gi|7 : TT-----T--G--AAAAA-T-CCAATTTCGC-GTA--AACAAATCC-TTC-T---T-ATC-TAGTTTTT--CTTCC-GA----AA--TA--------ACTTAA---AC------A-ATGTGTG------TC-CCTTCCACA-TACTCAAGA-CAAA-----------A-A---TTTAAATGA-A----TTTGAAC-ACT------------AT--TTC-ATATGCAGGCAT--TTCTCTCCATGGATTAGATAACAGACATAGCC-----------TTC-TT---T-CCTTACACGACGTAT-ACATG-----TAATTTAGTACTGCAT--CTTTA-CTA----GAAGCACTT-ACTACATGTAGTAATTC-AGTA-A-TGAGTCATTACTAAT-GACAT--ACATTTGTTTATTCTAATA-AAATGTTTGCT----TG-------------AA-------------G------------TGT------------AAA-ACA----TAAT--GG--A--TTTAAAG----GCATG---TG-ATCTT-A-CCT-TCGtatgtatgcttgcaaaatgctctagttattaaataactaaaaatcttggacaacaacttgacatattctgctaatttcaattcagattgttttctctgaattacatcaacatactggaacatggttgtacaaatgtatttgcaataatgtcaactattctgttatcgcgctattt
gi|8 : atttacacttcaaagtatatcttatatataatctcatagacaaattgatTT-----T--G--AAAA--T-TCAATTTAGT-GTA--CCCAAT-CC-T-A-TA--T-ATC-TAGTTTCT---TGCCCAA----AA--TA--------A--------CCTTAAAAA-ATATGTG------TC-CTTTAAA-A-GATGCAAGA-TAGAATTTTGAACATA-T---TTT-----ATA----TGCAAAC-ATTTTTTCTCTAAGGATAAGTA-ACA------TATGTATCCTG-------TT---TAA----------------------TTC-TT---T-CCCTACGC------T-GCACG-----CAAT--------GT-T--ATTT--CCAA--GGAACCACTT-A------------GTTC-ATTA-A-TGA--T-T-AG--ATAG---C--ACATATG-CTAATTC--TAGAA-------------TA-------------GAATGTTTGCTTGTTG------------TAT------------AAG-ACA----TAATAGA---A--TTAAAAA----TAAGA---T---TCTT-A-CCTgttc
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCAGCAACACAACAACATTTAAAAAAAATTGTGATTCCAGAACAACACACAGTCACATTAATATTAAAACAGAATAGATACAATAATACTACACGCGCTAAAGATGGCAAGTAGTAAAATATTACAATGAGTATAACTACACACACACATACACACAAGCAATGACATACAAGGTTTGGAGTAATAAATTGTAAGCTTGCAGGATATTTGACAAATCTTGCAGCATCTTTCAAGTTGTTAATAATGAGAAATTCTTGCATTTGAATGGTTGCCTTGAAAAAGAAAGGGAAATCAGACAAAAATGTCATTCATT
Unaligned ( gi|15 ): TATAGACAGGCAACACACCCAAAGAACGAAAACAAAACAATTCAAAGATTGCATCTTAAATCAAAATGAATGACTGTCAATACACATACAAATAAATATTACACACATCAACACACATACAAATAAATACTACACGCAGCAATACACAAATAAATACTACACACAGCAACACACATACA
Unaligned ( gi|24 ): GTGGGGGGGGGGAGGGGGTGGTAAAAGATATTTGTTTAAGCGGCAGGCACCTATTTGATTTTTATCGTTGAAGGGGGTATACTATGAAGATGACATATGCTTTAACATTTTTTTAT
Unaligned ( gi|27 ): GCTGCATTAATTTGTATGAGCTTTTTGCTATTGAGTGAAGCAGTATAATAAAATATACTAAAATACATGCTATTTTTGAGCAGAATGTTGTCCACATACATAATATGTAA
Unaligned ( gi|30 ): ATATTACATACAACGAAATATTACACATAGCAATACACAATCAAACAAATATTACACACAAGAATACGCATTTAAATAAATTACACAAACAGCAATACAAACACAA
Unaligned ( gi|32 ): ACATTTGCATTAATGTCGCATATTCTGTTTATCTGCTATTCAAGTTCAAAGGCAGACGCATCAGTACTTGATGTCTCATGAATTCATTATGAAATATTTAAG
Unaligned ( gi|37 ): AAGAACCATTCACTTTACATATATGAAATATGTATGCTTGCAAAATGTTGTAGTTAATAAATAAGTAAA
Unaligned ( gi|40 ): ATTGTTGACCAGTCACGGTAGGTCAGTGGTAGAGAGCTCCGTAA
Unaligned ( gi|41 ): TGCATTTGCGTTAATGTCAACATATTCTGTTTACCTGCTATT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 111 1 1111 11 11111 2222 11 1111111 1 1 333333333333 222222222 1111 11111111 11111111 1 11 111111 33333333333333333333333333 222 11111 555555555 11 11 11 111111111111111111111111111111111111111111111111111111111111111 1111 11111 11 11 33333333333333333 111111 3333333333333333333333333333333333333333333333333333333 111111 111 1111111 6666666666666666666666 11111111 11111 222222222222222 11 111111111111 1111111 88888888888888888888888888888888888888888888888888888888 111111111111 333333333 11 11 11 11 1 1 3333333333 11 22 444444444 11 44444444444 111
lowQualScore : 6666 6 2 333 66 0 4 4 4 0 3333 00 0 4 1 5 0 44444 1111 5 0 5 99 5 5 6666666 5 5 1 3 1 5 0 5 5 999 9999 4 4 77777 5 5 5 2 777 5 1 5 5 0 111111111111 3 5 5 77 77 5 5 111111111 777 4444 4 4 66666666 88888888 55 4 5555 8 8888 44 33 44 111111 66666666666666666666666666 0 000 22222 000000000 4 5 77 1 5 1 8 8 11 8 11 8 11 8 0 88 0 666666666666666666666666666666666666666666666666666666666666666 7777 00000 55 55 4 3 22 7 00 55 3 88 55 3 3 3 0 77 3 7777 00 44444444444444444 888888 3 111111 3 2 3 1 4 4444444444444444444444444444444444444444444444444444444 66 8 222222 000 4444444 777 0000000000000000000000 4 777 4 66666666 11111 888888888888888 44 4 666 3 777777777777 3 444 44 1111111 3 888888 5 9 44 3 00000000000000000000000000000000000000000000000000000000 555555555555 3 6666 000000000 6666 555 11 3 6 11 8 5 2 8 8 99 33 0 0 3 5555555555 00 22 2 8 8 0 88 8 666666666 0 0 11 11 8 8 55555555555 777
lowQualScore : .... . . ... .. . . . . . .... .. . . . . . ..... .... . . . .. . . ....... . . . . . . . . . ... .... . . ..... . . . . ... . . . . . ............ . . . .. .. . . ......... ... .... . . ........ ........ .. . .... . .... .. .. .. ...... .......................... . ... ..... ......... . . .. . . . . . .. . .. . .. . . .. . ............................................................... .... ..... .. .. . . .. . .. .. . .. .. . . . . .. . .... .. ................. ...... . ...... . . . . . ....................................................... .. . ...... ... ....... ... ...................... . ... . ........ ..... ............... .. . ... . ............ . ... .. ....... . ...... . . .. . ........................................................ ............ . .... ......... .... ... .. . . .. . . . . . .. .. . . . .......... .. .. . . . . .. . ......... . . .. .. . . ........... ...
lowQualScore : 0000 7 5 666 99 0 4 4 4 1 9999 66 1 4 9 7 1 33333 7777 7 1 7 99 7 7 9999999 7 7 4 6 4 7 1 7 7 777 4444 4 4 44444 0 0 0 5 222 7 4 7 7 7 000000000000 2 7 7 99 99 7 7 888888888 777 2222 4 4 11111111 99999999 00 5 7777 0 5555 88 55 77 555555 88888888888888888888888888 1 666 55555 222222222 4 0 99 4 7 6 0 0 00 0 00 0 44 0 8 88 8 000000000000000000000000000000000000000000000000000000000000000 0000 00000 55 55 0 6 88 3 00 88 6 22 00 6 6 6 4 99 3 1111 44 00000000000000000 888888 1 999999 1 8 1 4 0 9999999999999999999999999999999999999999999999999999999 99 9 888888 999 4444444 888 6666666666666666666666 4 888 4 33333333 11111 666666666666666 44 7 999 3 111111111111 1 111 22 5555555 1 555555 1 9 22 1 11111111111111111111111111111111111111111111111111111111 888888888888 1 5555 555555555 5555 444 22 1 2 22 0 0 5 0 0 00 88 0 0 2 5555555555 22 55 5 0 0 8 88 0 000000000 8 8 66 00 0 0 66666666666 555
consensus : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG--A-TC-TGAAGAA-AAAT-GAA-AATCA-TATGCATG-TA----ACA-CGA-ACATTTAAAAC-AAAA-TCAGTGAA-TTT-CAAAACT--AAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-T-A-CACACATAT-GTTTAGAT-AAATTAAT--T--TG-T-ACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----AATA-G--A-TAA------ATAC--GC--G-TA---------------TAAAATA---GA-----AGTA-CT-A----CATT-TATTTTAC-ATGCAATGTAAAAA--CTTATGCA-TGAAATACT-GCATCAT-GA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAAAANNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCAT--ATTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-------------AA-------------G------------TAT------------AAG-ACA----TAAT--A---A--TTCAAAA----TCATG---TG-NTCTT-A-CCTGTCGCG-AT-AGCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
Reference ( family-2589 ) : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG--A-TC-TGAAGAA-AAAT-GAA-AATCA-TATGCATG-TA----ACA-CGA-ACATTTAAAAC-AAAA-TCAGTGAA-TTT-CAAAACT--AAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-T-A-CACACATAT-GTTTAGAT-AAATTAAT--T--TG-T-ACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----AATA-G--A-TAA------ATAC--GC--G-TA---------------TAAAATA---GA-----AGTA-CT-A----CATT-TATTTTAC-ATGCAATGTAAAAA--CTTATGCA-TGAAATACT-GCATCAT-GA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAAAANNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCAT--ATTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-------------AA-------------G------------TAT------------AAG-ACA----TAAT--A---A--TTCAAAA----TCATG---TG-NTCTT-A-CCTGTCGCG-AT-AGCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
gi|1 : AGAGC-TAAATGTT--GTCAAAC-ATACAATAT-G-CAAACT----CA--GTAAGAATAAATAC-ATTT-----AAAAGGAA-TC-TGAAGAA-AAAT-TAT---TCA-TATGCATG-TA----ACA-CGA-ACATTTAAAACCAAAA-TCAGTGAA-TTTTCAAAACT--AAA----TGAAGACGCACATG-TATGACAT-TTC-AATGTAGTTA-CCTA-CATA-CA-TAAT-A-TG-A---A-TACACACAT-GTTTAGATTAAATTAAT--T--TG-T-ACATTTGGCTGGAG----GGG-GGGGGGGG----GTGACAAAA-ATGTT-AAAC--AA-GCACCTAAT-TAC---ATGAC--CTTC-A----A-TATC----ATT--G--A-TAACGGAATATAC--GC--GATA---------------TAAA-TA---GATTACTAGTA----A----CATT-TATTTTAC-ATGCAATGTAAAAAAACTTATGCACTGCACTACT-GCATCATTGA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAA
gi|1 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaTT-----T--G--AAAAAAT-TCAGTTTAATTGTA--AACAAA-CC-TTAATG--T-ATC-TAGTTT----CTGCC-AA----AG--TA--------A--------AC------A-ATATTTG------TC-TCTTCCAAA-AA-TCAAGA-TAAA-----------A-G---TTT-----A-AG---T---AACCAC-------------AT--GCGGATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---TTCCTTACGC------TTACACG-----TAAT--------GCAT----TTA-CAAACAAGAAGCACTTTA------------ATTTGAGTA---TTA--TAT-AC--AT-G---T--AAATT-GTTTATTTC--TA-AA-------------TA-------------AG---------------------------AT------------AAG-ACA----TAAT--A------TTCAAAA----TCATG---TG--TCTT-AACCTGTCGT--AT-AG-TCAGTGCCCGTGTTAGATCCTAGGAGGTTCGTTTGAGTTGGAGTCCTGCCAA--TGTGCAT-AGCTTCGATTCGTT---AAACCTCGCCTCGGA-TG-TAA---CTTTGATGATAAGGCTAATTG---------TT-GTTGAAGGT-CGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaatttttgaaaaaattcagtttaattgtaaacaaaccttaatgtatctagtttctgccaaagtaaacaatatttgtctcttccaaaaatcaagataaaagtttaagtaaccacatgcggatacatatcctttttaattcttttccttacgcttacacgtaatgcatttacaaacaagaagcactttaatttgagtattatatacatgtaaattgtttatttctaaataagataagacataatattcaaaatcatgtgtcttaacctgtcgtatagtcagtgcccgtgttagatcctaggaggttcgtttgagttggagtcctgccaatgtgcatagcttcgattcgttaaacctcgcctcggatgtaactttgatgataaggctaattgttgttgaaggtcggtattagaagcaagacgcacgggttttacaaaacga
gi|10 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaagagctaaatgttgtcaaacatacaatatgcaaactcagtaagaataaatacatttaaaaggaatctgaagaaaaattattcatatgcatgtaacacgaacatttaaaaccaaaatcagtgaattttcaaaactaaatgaagacgcacatgtatgacatttcaatgtagttacctacatacataatatgaatacacacatgtttagattaaattaatttgtacatttggctggagggggggggggggtgacaaaaatgttaaacaagcacctaattacatgaccttcaatatcattgataacggaatatacgcgatataaatagattactagtaacatttattttacatgcaatgtaaaaaaacttatgcactgcactactgcatcattgattgctgttcattgaaattccttatcaaatattttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaattA-ATGTT-A--C--A--GCACCTACC-TAG---GTGAC--CTTCAA-G--ATTATT----AATA-GA-A-TAA------ATAT--GCTTG-CACTTGATTGGGAAAATTAAAATA---GA-----AGTA-T-------CATT-CATTTTAC-ATa
gi|10 : gCACCTACC-TAG---GTGAC--CTTCAA-G--ATTATT----AATA-GA-A-TAA------ATAT--GC--nnnnnnnnnnnnnnnnnnncacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|11 : gaatgttacagcacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgattgggaaaattaaaatagaagtatcattcattttacatnnnnnnnnnnnnnnnnnnnTT-----C--G--ATAAA-T-ATAACTAGATTGCC--AACAAC-CC-TTG-TG--TTATC-TAGTCT-------------------------------------------------------G------TC-CATTCCACA-GACTCAAGA-TTAA-----------ttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|12 : actttcatatttaataatctcataaacaaattctatTCATATATTGATT-----TTGA--AAAAA-A-TCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-CA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAtcaattgaacctactttcagttatttcatatgcaagcatttcgtctctatgtctctaaaaaaataggtgggagacgtctatttacattacaatatgtattttataattcag
gi|12 : atgtattacttataatcC--CTT--A-G--A-GACT----AATA-G--A-GAA------ATGCTTGC--A-TA---------------TGAAATATT-GA-----AGTA-GTCA----AATT-GATTTTAtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctattagtctctaaggattatatgacagacatagcctgtttacatta
gi|13 : atgtattacttataatctcatatattgattttgaaaaaaatcaattagatgtacaaacaaaccctttgtatatatttttctgcccaaataacaatttaaacaatgtgtgtcccttccacaga-ATG------TAT--AGCCTT-------TT---AAA----------------------TCCATT---T---TTGCAT------G-ACACA-----TAAT--------GCA---------CAAA--AGAAGCAAAT-A------------TTTC-AATG-A-CGA--TAT-AC-------------GA-CTGTTTG-TTC--TA-AA-------------TA-------------AAT------------G------------TTT--------------G-TTT----TTAT--A---AACTACAAGA----TCATG---CA-ATCTT-G-CCTattatatgacagacatagcctgtttacatta
gi|14 : atgaaataaatttgattactatttcatacgtgaaaattttctctagtacgacttaggtgacttatgcTCATA----TATTGAACTT--G--AAAAA-AATCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-AA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAttgttttttt
gi|16 : cttataatctT-----A-G----C---AAC-AT-------------AC--ATG--TA------CAT----CCGT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACATG-----TAAT--------GCAT---TTT--CAAG--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ACATTTGTTTA-TTC--TA-AA-------------TAAATTGTTTGCTTGAA-------------G------------TAT------------AAG-ACA----TAAT--AT--A--TTTAAAA----TCATG---TG-CTCTT-A-CCTGCCtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctatagtctctaaggattatatgacagacatagcctgttacattacac
gi|17 : AACT--ACA----AGAAGAC-CACATA-T-TTG-AT-T-CTAATGTA--TA-CCTA-CATATCAGCAATCAGTG-ACT-A-TACACATAT-GTTTAGAT-AAATTAATCCT--TG-T-ACATTTGGC---AG----GAA-GGGGGGGGGGGTGTGACAAAAGATGTT-AG-CAAA--GCACCTAAT-T-A---GTGACAACTTC-A-ttt
gi|18 : ttcATCCTAA-CGGT-CGT--GAGTTGGGGTCCTGCCAATGTGT-CATAAGCTTCG--TCA-----AA-ACTCA----GGACCG-T-AA-CATTTAATGATA-AG---ATTGTGGATTTCTTTTTTTCAATATTC--T-TTAGAAGCAAGTGACGC-ATTATGTTTTAAGTGATTTGGACCTAAAAACGGAGGCCCTatgat
gi|19 : A-TAT-G-TAACATGCTACAAAGTGGAA-TAAATAC-ATTTTTTTTAAAAG--AATT-TGAAGAA-AAA--GAA-AATTA-TATGCATG-CA----ACA-CAA-ACATTTACAAC-AAAG-TCTGTGAA-TTT-CAAAACA--AAACAATTAAAGAC-CACATA-T-TG
gi|2 : taAGA-CATAATGTTT--GTCCACA-ATACA-TAT-GGCAACAT----CAC-GTAAGA-TAAATACTATCT-----AAAAG--ACTC-TGAAGAA-AAATAGAA-AATCAATATGCATG-TA----ACA-CGA-ACAT-----ACTAAAA-TCAGTGAAATTT-CAAAACTAAAAA----TGAAAAC-CACATG-T---G-AT-T-C-AAT-TA--TAGC-TA-CATA-CAGTAAT-AGTGAA-T-AGCAC-CAC-T-GATTAGAT-AAATTAAT--TTATG-T-ACATATGGC---AGGGGTGGG-GGGGGGGG----GTGAC-AAA-ATGTT-A--C--AC-GCACCTAATGTAAG--GTGAC--CTTA-A-G--A-TATT----GATA-GGAA-T-A------ATAC--GC--G-TA---------------TAAAATAC--GA-----AGTATCT-AGTACCATT-TATTTTACGATGCAATGTAAAAA--CTTATGCA-TGCACTACTCGCATCAT-GA--TTG-CTGATTT-CA-TGAAATTCGCTTATC--AATATTTTAAA
gi|2 : aaTG----GATT-----T--GGAAAAAA-T-TCAGTTTAAT--TA--AACAA--CC-TTA-TGGTT-ATCCTATTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGTG------TCTCCTTCCAAAAGATTCAAGAATAAA-----------G-T---TTT-----A-A----T---GAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---C-CCTTACGC------T-ACAC------TAAT--------GC----ATTTATCAAA--AGAAGCACTT-A------------ATTT-AGTA-ATTGA--TAT-AC--AT-G---T--AAATTTGT---TTTC--TA-AA-------------T--------------AA-------------G------------TAT------------AAGAACA----TAAT------A--TTCAAAA----TCATAATTTG-CTCTT-A-CCTGTCGCGAATAAGCTCAGTGGCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTTTTAAA-TCTCGC-TC-GA-TGTTAAACCTTTTGATGATA-GGCTAATTGGTT------TTTGTTGAATGTTCGGTA-TAGAAGCAA--GACGCAA-CGGTTTTTA----------AC---AAAACGGAGGCCCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaattggatttggaaaaaattcagtttaattaaacaaccttatggttatcctattttttctgccaaaagtaaacaatatgtgtctccttccaaaagattcaagaataaagttttaatgacacatgtgatacatatcctttttaattcttcccttacgctacactaatgcatttatcaaaagaagcacttaatttagtaattgatatacatgtaaatttgttttctaaataagtataagaacataatattcaaaatcataatttgctcttacctgtcgcgaataagctcagtggccgtgttagatcctagaggtcgtgagttggagtcctgccaatgtcatagcttcgattcgttttaaatctcgctcgatgttaaaccttttgatgataggctaattggtttttgttgaatgttcggtatagaagcaagacgcaacggtttttaacaaaacggaggccct
gi|20 : aaagacataatgtttgtccacaatacatatggcaacatcacgtaagataaatactatctaaaagactctgaagaaaaatagaaaatcaatatgcatgtaacacgaacatactaaaatcagtgaaatttcaaaactaaaaatgaaaaccacatgtgattcaattatagctacatacagtaatagtgaatagcaccactgattagataaattaatttatgtacatatggcaggggtggggggggggggtgacaaaatgttacacgcacctaatgtaaggtgaccttaagatattgataggaataatacgcgtataaaatacgaagtatctagtaccatttattttacgatgcaatgtaaaaacttatgcatgcactactcgcatcatgattgctgatttcatgaaattcgcttatcaatattttaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaatT-A------------ATTC-AGTG-A-TGA--TAG--------G---T--ATATTTGTTTATT-C--TA-AA-------------CAT------------AA-------------GCTTTGCTTGACCTAT------------AAG-ACA----TAAT--AG--A--TTTAAAA----TCATG---TGATTCTTGA-CCGGTCACA-GT-AGGTCAGTG
gi|21 : a----CATT-CATTTCAC-ATGCAATGTAAAAA--CTCCTGCA-TGAAATACgtggagtgttcgcttcataa
gi|22 : cTTT-AGTA-A-TGA--TAT-AC--AT-G---T--AAATTTGTTTA----------A-------------TAT------------AA-------------G------------TAT------------AAG-ACA----TAAT--A------TTCAAAC----TCATG---TG-CGCTT-A-CCTGTCGCG-AT-AGCTCAGCGCACGTGTTAGATCCTAG-AGGT-CGT--GAGTataatgcaaaatgctatagttaataaataactaaacgtcttggtaacaagtgactgttcttggtaatttcaattcagattgctttct
gi|23 : AATGCATTCTG-CA-A-TAGAGCATAAT-GTT--GTCAAAA-ATACA-TGT-G-TAAAAT----CA--GTAGGA-TAAATA
gi|25 : ctgggttaatttgtatacatttttgcttataaatgaagcagtaatataaaataa-TCCATTAGAT-GTG--GACAAA-CCCTTT-TG--T-AAC-TATTTTTTT-CTGCA-AATATCAACTTA--------A--------AC------A-ATATGTACTAGTATC-CCTTCCATA-GACTCAAGA-TAAA-----------
gi|26 : agA-ATGTT-A--C--A--GCACC-----TAA---GTGAC--CTTCAA-G--C-TATT----AATA-G--A--AG------ATAtacaacatttctttca
gi|28 : cT-A------------ATTC-AGCG-A-TGA--T-------AT-G---T--ATATTTGTTTG-TTC--TA-AACAAAATGTTTGCTTA-------------AA-------------C------------TAT------------AAG-ACA----AGAT--AT--A--TTTAAAA----TGATG---TG-GTCTT-G-CCTtatgcttgcacttggtttgctacattgaaaggatggggaaatcaaaatagaagtaccattcattt
gi|29 : tatttaAAAA-ATGTT-A--C--A--GCACCTAA--------GTGAC--CTTCCA-G--A-TATT----AATATA--A-TGA------ATA-------G--A---------------TAAAATA---GA-----AGTA-C-------CATT-TATTTTAT-ATGCAATGTAAAAA--CTTATGCA-TGAAATAttgtttctt
gi|3 : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTACGA-TAA-TAC-ATTT-----AAAAA--A-TCCTGACGGACAAAT-GAATAATCA-TAT-CATGGTA----ACAACGA--CATTTAAGAC-AAAA-TCAGTGGA-ATT-CAAAACT--AAA----TGCAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-TTA-CACACATAT-GTTTCGAT-AAATTAAT--T--TG-T-ACTTTCGGC---AG----GAG-GGGGAAGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----GATA-G--A-TAA-------TAC--GT--G-TA---------------TAAAATA---GA-----AGTA-CT-ATAC-CATT-TATTTTAC-ATGCAATGTAAAAA--CTTA-GCA-TGTAATACT-GCATCAT-GA--TTG-CTG--TT-CAT--GAATTC-CTTATC-AAATATTTTAAAANNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G---AAAA-T-TCAGTTAAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AG--TA--------A--------AC------A-ATATGTG------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------G-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCATAAATTTA-CAAA--AGATGCACTT-A------------ATTT-AGTATG-TGA--TAT-AC--AT-G---T--AAATTTGTTTATTTC--TA-AA-------------TA-------------AA-------------G------------TAT------------AAG-ACA----TAAT------A--TTCAAAA----TCATG---TG-CTCTT-A-CCTGTCGCG-AT-A-CT-AGTGCCC--GTTAGATCCTAG-AGTT-CGTG-GAGTTGGAGTCCTGCCAA--TGT-CAT-AGC--------------AA-CCTCGCATCGGA-TG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGGAGGTCCT
gi|31 : T-A------------ATTC-AGCG-A-TGA--TAT-GT--AC-G--------ATTTGTTTTGTTC--TA-AACAAAATGTTTGCTTA-------------AA-------------C------------TAT------------AAG-ACA----AGAT--AT--A--TTTAAAA----TGATG---TG-GTCTT-G-CCT
gi|33 : AATGCATTCTGTT--A-TAGAGCATAAT-GTT--GTCAACA-ATACC-TAT-G-CAAC--------------------ATAC-ATTT-----AAAAGA-A-TC-TGAAGAA-AAA--GAA-ttgtttctt
gi|34 : --TA--------A--------AC------A-ATGTGTG------TC-CCTTCCACA-GACTCAATA-TAAA-----------A-T---
gi|35 : aactATCA-TATGCATG--A----ACA-CGA-ACATT-AAAAC-AAAA-TCAGTG---------AAAC---AAA----TGAAGAC-CACATATT-TGA-AT-T-C-AATGTA--Tcaatttgaacgctaccttggtattttattatatg
gi|36 : A-CG-TAAA-CTTTCGATGATA-AGCTAATTG---------TTTCTTCAATATTCGGTATTAGAACCAA--GACGC-A-CGGGTTTTA----------gt
gi|38 : TG-T--AATAGAGCATAATG------TCAAAA-ATACA-TAT-G-TAAAAT----CA--ATAGGA-TAAATAcg
gi|39 : TCTT--CTGCC-AA----AA--TATCAAGTAAA--------AC------A-ATCTGTA------TC-CTTTCCACA-G
gi|4 : ac-T--A-TAGACCATAATGTTT--GTCAGCATGTA-A-CAT-G-CTATAAA---CA--GTAGGA-TAAATAT-ATTT-----TAAAGA-A-TT-TGAAG-A-AAAC-GAA-AACCA-TATGCACG-CAACACACA-CAA-ACATTTAA----AAAA-TCTGTGAA-TTT-CAAGACA--AAA----TAAAGAC-CACATA-T-TGA-ATAT-G-ATTGTT--AA-T-TAGCACA-CACTAATAAATG-C-T-A-AACACA
gi|4 : tatattgt--AAG----TGGATAT-CACATA-C----------C-ACTGTA--TC-C-TA-CACA-CAGCAAT-A----------CACACAGAT-GTTTAGAC-TAATTAAC--T--AG-T-ACACTTgcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|4 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacA----AATT-----T--G--TAAAA-T-TTAATTACAT-GTA--AAC----CC-TT--TG--T-ATC-TAGTTTTTTTCTGTC-AA----AA--TA--------A--------CC------ACATAAACAA-----TG-CCTTCCACA-GACTCAAGA-TAAA-----------A-TCAATTT-----G-AACCCT---ATT-TC-------------AT--GTGCACG------CAT---TTCTT-------TC---TAAGGACTAGTCGACAGACATAGCGTTT-TTTAAT-TCTTTCCT------T-TCACGACACATAAT--------G--T--ATCT--------AGAAGCACTC-A------------ATTA-AGTA-T-TGA--T-------AT-G---T--A------TTTATTTC--AA-AA-------------TA-------------AA-------------A------------TGTTTGTTTGACTAAAAA-ACA----TAAT--AG--A--TTTAAAA----TCATG---TG-ATCTT-G-CATGTtgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|5 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaACACATATCATTTAGAA-CAATTAAT--T--TGGT-ACAGTTGGC---------GAGTGGGGGGGG----GTTACAAAA-CT-------T--A--ACATCTAA--------GTCAC--CTTC-A-AGAA-TAT-----AAT--G--A-GAA------A---------G-T----------------TAAAATATTAGA-----AGTA-GT------CATTCTATT--AC-ATGCAATGTAAAAA--CTTATGCA-TGAAATTAT-GCCTTGC-AAATTTGCCTG--TT-TATTGCAATAA-CTTA---AAA-ATCTTGAaccttcgtttctt
gi|5 : gcttACT-GCATCAT-AA--TTG-CTG--TTTCAT-GAAATTC-CTTATCAAAATATTTTAAcaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|5 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagTT-----T--G--AAAAA-T-TCAGTTTAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGT-------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------AGT---TTG-----A-A----T---AAC-AC-------------AT--GTG-ACA-------AT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC--------ACACG-----TAAT--------GC----ATTTA-C-AA--AGAAGCACTT-A------------TTAT-AGT--A-TTA--T-T-ACG-AT-G---CTAACATTTTTTTAT-----AA-AA-------------T--------------AA-------------G------------TAT------------AA--ACAAGGTTAAT--ACCTA--TTCAACATTATTTATG---TGCATCTT-ACCCTGTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|6 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgatGCATTCTG-TTAA-TA-ACAATAA--ATTTGGTCAACAGATACA-TATCG-CAACAT----CA--GTAG-A-TAA-TAC-AT-------AAAAG--A-TC-TGAAGAA-AAA--AAA-AATCA-TATGCATGGTA----AC--CGACAGATTTAAAAA-AAAAATCAGTAAG-TTT-TAAAACT--AAA----TGA-GAA-CACATA-C-TGA-AT-T-C-AAT-T---TA-C-TA-TATA-TAGCA----------T-A-CAC-CATAT-GTT-AGAT-AAAT-AAT--T--TG-TTACATTTGGC---AA----G------GGGGG----GTGACAATA-ATGTTCA--C--GATGCACCTAAT-TAATTAGTGAC--CTTC-AAG--A-TATTTTAAAATA-G--AATAA------ATAT--AC--G-TG---------------TA---TA---GA-----AGTA-C-------CATT-TATTTTAC-ATGCAATGTAAAAA--CTT-TGCA-TGAAttttct
gi|7 : TT-----T--G--AAAAA-T-CCAATTTCGC-GTA--AACAAATCC-TTC-T---T-ATC-TAGTTTTT--CTTCC-GA----AA--TA--------ACTTAA---AC------A-ATGTGTG------TC-CCTTCCACA-TACTCAAGA-CAAA-----------A-A---TTTAAATGA-A----TTTGAAC-ACT------------AT--TTC-ATATGCAGGCAT--TTCTCTCCATGGATTAGATAACAGACATAGCC-----------TTC-TT---T-CCTTACACGACGTAT-ACATG-----TAATTTAGTACTGCAT--CTTTA-CTA----GAAGCACTT-ACTACATGTAGTAATTC-AGTA-A-TGAGTCATTACTAAT-GACAT--ACATTTGTTTATTCTAATA-AAATGTTTGCT----TG-------------AA-------------G------------TGT------------AAA-ACA----TAAT--GG--A--TTTAAAG----GCATG---TG-ATCTT-A-CCT-TCGtatgtatgcttgcaaaatgctctagttattaaataactaaaaatcttggacaacaacttgacatattctgctaatttcaattcagattgttttctctgaattacatcaacatactggaacatggttgtacaaatgtatttgcaataatgtcaactattctgttatcgcgctattt
gi|8 : atttacacttcaaagtatatcttatatataatctcatagacaaattgatTT-----T--G--AAAA--T-TCAATTTAGT-GTA--CCCAAT-CC-T-A-TA--T-ATC-TAGTTTCT---TGCCCAA----AA--TA--------A--------CCTTAAAAA-ATATGTG------TC-CTTTAAA-A-GATGCAAGA-TAGAATTTTGAACATA-T---TTT-----ATA----TGCAAAC-ATTTTTTCTCTAAGGATAAGTA-ACA------TATGTATCCTG-------TT---TAA----------------------TTC-TT---T-CCCTACGC------T-GCACG-----CAAT--------GT-T--ATTT--CCAA--GGAACCACTT-A------------GTTC-ATTA-A-TGA--T-T-AG--ATAG---C--ACATATG-CTAATTC--TAGAA-------------TA-------------GAATGTTTGCTTGTTG------------TAT------------AAG-ACA----TAATAGA---A--TTAAAAA----TAAGA---T---TCTT-A-CCTgttc
blockSeqs : TTA A G TGT TG T . C G GCTA AA . A T TTTTT AA C C TA T A CAACAC A C T A T A A . TAA CAAT . T TTG A . T G A G C G T CAGTGACTA A C . CC TA G T AGGGGT AGT GGGT G C GCAAA TTAATTA AA A AGA T TTAA AT GA AT . TGCTTGCACTTGATTGGGAAAAT TTA . TCTAGTAC C G . A . C C . AT C AT T TT G AA . GAACT TG GA . A AG T CA AT C G GT T C G TT C TATC CT ACAATTTAA TTAAAA C CTAGTA T C A C A ATTTTGAACATATTTTATATGCAAACATTTTTTCTCTAAGG AA C TGCAGG GTA CCATGGA AGA GGACTAGTCGACAGACATAGCG A TAA . GACGTAT ACACA TTAGTACTGCATC AT A A . CTACATGTAGTA . AT GT ATTACTA A ACAT G T AA G TAAATTGTTTGCTTGAAG TTGTTTGACTAA A AGGT ACCTA TTAT ATT AT G C GA A C G . . G TG . A T ATTCGTTTTA A CA G C T AC . TGGATTTCT AT GT A T AAGTGATTTGG CTA
blockSeqs : TT . G TGG . G . . . A C . A . . AC . . T . . GTA . . T G . . . . T . . . TGA . . . G A . . . . AGTGAATAG A . . . . . . AG AA . . . CGAT TGTAAG . A AG T . A A T . CTTGCATA TT . CTATAC . . . C . A . . . . . . T . A . . . . . . AG . CA C . T . . . T T . . G ACAATTTAA . . A . C . T . AATTTAAATGAATTTGAACACT . . . A . . CAGACATAGCC . . . G . GCATAAA A A G . . . TG . ATAC . CTA C T . . CATAAGCTTTGCTTGACC . . . AAAC . . CA . . A . G G . . . . . . T TCA T C G . . A . GTT AT . . . A .
blockSeqs : T . G TGT . . . . . . . . A . . AA . . C . . GTA . . T A . . . . A . . . TGA . . . G A . . . . AGTGATTA A . . . . . . AG GG . . . CAC CTAG . A G . . A A T . CGCGTA C . GTCA . . . A . A . . . . . . T . A . . . . . . AG . . A . T . . . T . . . G TCAAGTAAA . . . . C . C . ATCAATTTGAACCCTATTTC . . . A . . . . . . T . GCAT A A A . . . A . ATAC . T A T . . CAAAATGTTTGCTTAAAC . . . AGAA . . A . . G . C . . . . . . . . . C . . . . A . . T . . . A .
blockSeqs : T . G TG . . . . . . . . A . . AA . . . . . CA . . T A . . . . T . . . TGA . . . G A . . . . AAATGCTA A . . . . . . AA AG . . . CA CTAG . C G . . A . G . CGTGTA . . GT . . . A . T . . . . . . T . . . . . . . . TA . . A . A . . . G . . . . ACTTAA . . . . A . T . AGTTTGAATAACAC . . . A . . . . . . T . GTTA A A A . . . A . ATAC . T T G . . CAAAATGTTTGCTTAAAC . . . ATA . . C . . G . C . . . . . A . . A . . . .
blockSeqs : T . C TG . . . . . . . . A . . A . . . . . TA . . . . . . . . A . . . TGA . . . G T . . . . TA A . . . . . . . . . . . CA TTAA . . G . . A . T . TACGTG . . T . . . A . A . . . . . AG . . A . T . . . G . . . . A . . . . T . C . GTTTTAATGACAC . . . A . . . . . . T . GCA . T A . . . A . ATAC . T A T . . TAGAATGTTTGCTTGTTG . . . AGA . . C . .
blockSeqs : C TG . . . . . . . . A . . A . . . . . A . . . . . . . . T . . . G . . . . A . . . . A . . . . . . . . . CA TTA . . G . . A . T . GA . . C . . . . . A . . . . . AA . . A . A . . . G . . . . A . . . . A . C . GTTTTAATAACAC . . . T . . . . . . T . GCA . C A . . . A . ATAC . T T T . . ATGTTTGCTTGAAG . . . ATA . . C . .
blockSeqs : . A . . . . . . . . . . . . . . . . . . . . . . CA TAA . . G . . A . T . GT . . C . . . . . . . AC . . A . A . . . G . . . . A . . . . C . T . . . . . . . . . . . T . GTA . . . . . . A . ATGT . T A T . . TAAATG . . . ATA . . G . .
blockSeqs : . . . . . . . . . . . . TA . . . G . . A . G . . . . . . . TA . . T . C . . . G . . . . A . . . . C . C . . . . . . . . . . . . GCA . . . . . . A . TACG . T C A . . TATAAG . . . AGA . . C . .
blockSeqs : . . . G . . . . . . . . . . . TC . . . . A . . . . . . . . A . . . . C . T . . . . T . TAG . T C . . . TAAAG . . . GGA . . G . .
blockSeqs : . . . TA . . . . . . . . . . . . . A . . . . A . . . . A . AG . C C . . . TAAAA . . . A . . A . .
blockSeqs : . . . . A . . . . C . . . . A . . . . . . . . TAAG . . . A . . A . .
blockSeqs : . . . . . . . . . A . . . . . . . . TAAG . . . A . . . . .
blockSeqCons : T*** TG* AA** T* GCA**** TGA** A** AGTGACTA**** AG******* CA****** G*** A* ****** CGCGTA******************** ***** ** T* **** N* T******* GCA************ A* A** A** ANA****** N* G* ** A* A**********
originalCons : AATGCATTCTG-T--A-TAGAGCATAATGGTT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG--A-TC-TGAAGAA-AAAT-GAA-AATCA-TATGCATG-TA----ACA-CGA-ACATTTAAAAC-AAAA-TCAGTGAA-TTT-CAAAACT--AAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTG-A-T-A-CACACATAT-GTTTAGAT-AAATTAAT--T--TG-T-ACATTTGGC---AG----GAG-GGGGGGGG----GTGACAAAA-ATGTT-A--C--A--GCACCTAAT-TAA---GTGAC--CTTC-A-G--A-TATT----AATA-G--A-TAA------ATAC--GC--G-TA---------------TAAAATA---GA-----AGTA-CT-A----CATT-TATTTTAC-ATGCAATGTAAAAA--CTTATGCA-TGAAATACT-GCATCAT-GA--TTG-CTG--TT-CATTGAAATTC-CTTATC-AAATATTTTAAAANNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------GCAT--ATTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-A-TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-------------AA-------------G------------TAT------------AAG-ACA----TAAT--A---A--TTCAAAA----TCATG---TG-NTCTT-A-CCTGTCGCG-AT-AGCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
finalCons : AATGCATTCTGT---A-TAGAGCATAATG-TT--GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAGAA--TC-TGAAGAA-AAAT-GAA-AATCA-TATGCATGGCA----ACA-CGA-ACATTTAAAAC-AAAA-TCAGTGAA-TTT-CAAAACT--AAA----TGAAGAC-CACATA-TTGA--AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAATAGTGACTA----CACACATAT-GTTTAGAT-AAATTAAT--T--TG-T-ACATTTGGCAG-------GAG-GGGGGGGG----GTGACAAAA-ATGTT-ACA------GCACCTAAT-TAA---GTGAC--CTTC-AG---A-TATT----AATA-G--A-TAA------ATACGCGTA--------------------TAAAATA---GA-----AGTA-CT-A----CATT-TATTTTAC-ATGCAATGTAAAAA--CTTATGCA-TGAAATACT-GCATCAT-GA--TTG-CTG--TT-CAT-GAAATTC-CTTATC-AAATATTTTAAAANNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGCT-------ACACG-----TAATGCA------------TTTA-CAAA--AGAAGCACTT-A------------ATTC-AGTAA--TGA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-------------AA-------------G------------TAT------------AAG-ACA----TAATANA------TTCAAAA----TCATG---TGN-TCTT-A-CCTGTCGCG-AT-AGCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
9 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCAGCAACACAACAACATTTAAAAAAAATTGTGATTCCAGAACAACACACAGTCACATTAATATTAAAACAGAATAGATACAATAATACTACACGCGCTAAAGATGGCAAGTAGTAAAATATTACAATGAGTATAACTACACACACACATACACACAAGCAATGACATACAAGGTTTGGAGTAATAAATTGTAAGCTTGCAGGATATTTGACAAATCTTGCAGCATCTTTCAAGTTGTTAATAATGAGAAATTCTTGCATTTGAATGGTTGCCTTGAAAAAGAAAGGGAAATCAGACAAAAATGTCATTCATT
Unaligned ( gi|15 ): TATAGACAGGCAACACACCCAAAGAACGAAAACAAAACAATTCAAAGATTGCATCTTAAATCAAAATGAATGACTGTCAATACACATACAAATAAATATTACACACATCAACACACATACAAATAAATACTACACGCAGCAATACACAAATAAATACTACACACAGCAACACACATACA
Unaligned ( gi|24 ): GTGGGGGGGGGGAGGGGGTGGTAAAAGATATTTGTTTAAGCGGCAGGCACCTATTTGATTTTTATCGTTGAAGGGGGTATACTATGAAGATGACATATGCTTTAACATTTTTTTAT
Unaligned ( gi|27 ): GCTGCATTAATTTGTATGAGCTTTTTGCTATTGAGTGAAGCAGTATAATAAAATATACTAAAATACATGCTATTTTTGAGCAGAATGTTGTCCACATACATAATATGTAA
Unaligned ( gi|30 ): ATATTACATACAACGAAATATTACACATAGCAATACACAATCAAACAAATATTACACACAAGAATACGCATTTAAATAAATTACACAAACAGCAATACAAACACAA
Unaligned ( gi|32 ): ACATTTGCATTAATGTCGCATATTCTGTTTATCTGCTATTCAAGTTCAAAGGCAGACGCATCAGTACTTGATGTCTCATGAATTCATTATGAAATATTTAAG
Unaligned ( gi|37 ): AAGAACCATTCACTTTACATATATGAAATATGTATGCTTGCAAAATGTTGTAGTTAATAAATAAGTAAA
Unaligned ( gi|40 ): ATTGTTGACCAGTCACGGTAGGTCAGTGGTAGAGAGCTCCGTAA
Unaligned ( gi|41 ): TGCATTTGCGTTAATGTCAACATATTCTGTTTACCTGCTATT
Alignments
lowQualScore : 1111 1111 11 11111 11 3333 1 1111 1 2222222 1 222222222222 1111 1111111111 11111111 1 11 111111 3333333333333333333333333 222 11111 555555555 1 66666666666666666666666666666666666666666666666666666666666666 1111 11111 11 11 33333333333333333 111111 3333333333333333333333333333333333333333333333333333333 111111 111 1111111 6666666666666666666666 11111111 11111 11111111 11 111111111111 1111111 88888888888888888888888888888888888888888888 111111111111 111 11 111 11 11 1 1 3333333333 11 22 444444444 11 44444444444 111
lowQualScore : 9999 4 4 0 2 4 8 8 4 4 4 0 3333 00 0 4 5 0 44444 5 5 5 99 5 5 1111 5 5 5 77 3 1 0 5 5 3 5555 0 4 4 77777 5 5 5 2 777 5 1 5 5 0 2222222 5 3 5 5 1 5 77 77 1 555555555555 4444 4 4444444444 44444444 4 55 8 55 8 8888 4 77 0 111111 7777777777777777777777777 5 000 22222 000000000 4 5 77 1 5 8 0 6 6 99 6 99 6 3 3 99 6 99 6 22222222222222222222222222222222222222222222222222222222222222 7777 00000 55 55 4 3 22 7 00 55 3 88 55 3 3 3 0 77 3 7777 00 44444444444444444 888888 3 111111 3 2 3 1 4 4444444444444444444444444444444444444444444444444444444 66 8 222222 000 4444444 777 0000000000000000000000 4 777 4 66666666 11111 66666666 4 9999 66 11 4 666 3 777777777777 3 3 3 44 1111111 3 888888 5 999 44 3 00000000000000000000000000000000000000000000 555555555555 3 6666 888 3 6666 555 11 3 6 3 8 333 2 8 8 99 33 0 0 3 5555555555 00 22 2 8 8 0 88 8 666666666 0 0 11 11 8 8 55555555555 777
lowQualScore : .... . . . . . . . . . . . .... .. . . . . ..... . . . .. . . .... . . . .. . . . . . . .... . . . ..... . . . . ... . . . . . ....... . . . . . . .. .. . ............ .... . .......... ........ . .. . .. . .... . .. . ...... ......................... . ... ..... ......... . . .. . . . . . . .. . .. . . . .. . .. . .............................................................. .... ..... .. .. . . .. . .. .. . .. .. . . . . .. . .... .. ................. ...... . ...... . . . . . ....................................................... .. . ...... ... ....... ... ...................... . ... . ........ ..... ........ . .... .. .. . ... . ............ . . . .. ....... . ...... . ... .. . ............................................ ............ . .... ... . .... ... .. . . . . ... . . . .. .. . . . .......... .. .. . . . . .. . ......... . . .. .. . . ........... ...
lowQualScore : 7777 4 4 1 0 4 9 9 0 4 4 1 9999 66 1 4 7 1 33333 7 1 7 99 7 7 4444 7 7 7 11 6 4 1 7 7 6 6666 8 4 4 44444 0 0 0 5 222 7 4 7 7 7 4444444 7 2 0 7 7 7 99 99 4 222222222222 2222 4 2222222222 99999999 0 00 2 55 0 5555 0 55 7 555555 9999999999999999999999999 0 666 55555 222222222 4 0 99 4 7 6 7 7 7 22 7 22 7 3 2 22 7 22 7 00000000000000000000000000000000000000000000000000000000000000 0000 00000 55 55 0 6 88 3 00 88 6 22 00 6 6 6 4 99 3 1111 44 00000000000000000 888888 1 999999 1 8 1 4 0 9999999999999999999999999999999999999999999999999999999 99 9 888888 999 4444444 888 6666666666666666666666 4 888 4 33333333 11111 11111111 4 4444 11 99 7 999 3 111111111111 1 1 1 22 5555555 1 555555 1 888 22 1 11111111111111111111111111111111111111111111 888888888888 1 5555 444 1 5555 444 22 1 2 2 0 000 5 0 0 00 88 0 0 2 5555555555 22 55 5 0 0 8 88 0 000000000 8 8 66 00 0 0 66666666666 555
consensus : AATGCATTCTGT--A-TA-G-AGCATAATG-TT-GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG-AATCTGA-AGAAAAAT-GAA-AATCA-TATGCATG---TA-AC-ACGA-ACATTT-AAAAC-AAAATCAGTGAA-TTT-CAAAACTAAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTGANTA-CACACATAT-GTTTAGAT-AAATTAAT--TT--G-TACATTTGGC---AGGAG----GGGGGGGG----GTGACAAAA-ATGTT--A-C--A--GCACCTAAT-TA---AG-TGAC--CTTC-AG--A-TATT----AATA-G--ATAA------ATAC--GC--GTA---------------TA-AAATA---GA-----AGTA-CT-A----CATT-TATTTTAC-ATGCAATGT--AAAAACTTATGCA-TGNAATACT-GCATCA-TGA--TTG-CTG--TT-CA-TGAAAT--TC-C--TTATC-AAATATTTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------G-C----AT--TTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-AT-GA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAGA-CA----TAATA--NATT-CAAAA----TCATG---TG-NTCTT-A-CCTGTCGCGA-TA-GCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
Reference ( family-2589 ) : AATGCATTCTGT--A-TA-G-AGCATAATG-TT-GTCAACA-ATACA-TAT-G-CAACAT----CA--GTAGGA-TAAATAC-ATTT-----AAAAG-AATCTGA-AGAAAAAT-GAA-AATCA-TATGCATG--GCA-AC-ACGA-ACATTT-AAAAC-AAAATCAGTGAA-TTT-CAAAACTAAA----TGAAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTGACTA-CACACATAT-GTTTAGAT-AAATTAAT--TT--G-TACATTTGGC---AGGAG----GGGGGGGG----GTGACAAAA-ATGTT--A-C--A--GCACCTAAT-TA---AG-TGAC--CTTC-AG--A-TATT----AATA-G--ATAA------ATAC--GC--GTA---------------TA-AAATA---GA-----AGTA-CT-A----CATT-TATTTTAC-ATGCAATGT--AAAAACTTATGCA-TGAAATACT-GCATCA-TGA--TTG-CTG--TT-CA-TGAAAT--TC-C--TTATC-AAATATTTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G--AAAAA-T-TCAATTNGAT-GTA--AACAAA-CC-TTN-TG--T-ATC-TAGTTTTT--CTGCC-AA----AA--TA--------A--------AC------A-ATATGTG------TC-CCTTCCACA-GACTCAAGA-TAAA-----------A-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------G-C----AT--TTA-CAAA--AGAAGCACTT-A------------ATTC-AGTA-AT-GA--TAT-AC--AT-G---T--ANATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAGA-CA----TAATA--NATT-CAAAA----TCATG---TG-NTCTT-A-CCTGTCGCGA-TA-GCTCAGTGCCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTT---AA-CCTCGC-TCGGA-CG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTTA----------AC---AAAACGGAGGCCCT
gi|1 : A-G-AGCTAAATG-TT-GTCAAAC-ATACAATAT-G-CAAACT----CA--GTAAGAATAAATAC-ATTT-----AAAAGGAATCTGA-AGAAAAAT-TAT---TCA-TATGCATG---TA-AC-ACGA-ACATTT-AAAACCAAAATCAGTGAA-TTTTCAAAACTAAA----TGAAGACGCACATG-TATGACAT-TTC-AATGTAGTTA-CCTA-CATA-CA-TAAT-A-TGAATA-CACACAT---GTTTAGATTAAATTAAT--TT--G-TACATTTGGCTGGAGGGG----GGGGGGGG----GTGACAAAA-ATGTTAAA-CA-A--GCACCTAAT-TA---CA-TGAC--CTTC-A---A-TATC-----ATT-G--ATAACGGAATATAC--GC--G-A---------------TATAAATA---GATTACTAGTA----A----CATT-TATTTTAC-ATGCAATGTAAAAAAACTTATGCACTGCACTACT-GCATCATTGA--TTG-CTG--TT-CATTGAAAT--TC-C--TTATC-AAATATTTTAA
gi|1 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaTT-----T--G--AAAAAAT-TCAGTTTAATTGTA--AACAAA-CC-TTAATG--T-ATC-TAGTTT----CTGCC-AA----AG--TA--------A--------AC------A-ATATTTG------TC-TCTTCCAAA-AA-TCAAGA-TAAA-----------A-G---TTT-----A-AG---T---AACCAC-------------AT--GCGGATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---TTCCTTACGC------TTACACG-----TAAT--------G-C----AT--TTA-CAAACAAGAAGCACTTTA------------ATTTGAGTA--T-TA--TAT-AC--AT-G---T--AAATT-GTTTATTTC--TA-AA-------------TA-AG---------------------------AT------------AAGA-CA----TAATA----TT-CAAAA----TCATG---TG--TCTT-AACCTGTCGT-A-TA-G-TCAGTGCCCGTGTTAGATCCTAGGAGGTTCGTTTGAGTTGGAGTCCTGCCAA--TGTGCAT-AGCTTCGATTCGTT---AAACCTCGCCTCGGA-TG-TAA---CTTTGATGATAAGGCTAATTG---------TT-GTTGAAGGT-CGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaatttttgaaaaaattcagtttaattgtaaacaaaccttaatgtatctagtttctgccaaagtaaacaatatttgtctcttccaaaaatcaagataaaagtttaagtaaccacatgcggatacatatcctttttaattcttttccttacgcttacacgtaatgcatttacaaacaagaagcactttaatttgagtattatatacatgtaaattgtttatttctaaataagataagacataatattcaaaatcatgtgtcttaacctgtcgtatagtcagtgcccgtgttagatcctaggaggttcgtttgagttggagtcctgccaatgtgcatagcttcgattcgttaaacctcgcctcggatgtaactttgatgataaggctaattgttgttgaaggtcggtattagaagcaagacgcacgggttttacaaaacga
gi|10 : gtgtgttaatttgtatgcatttttgctaattgaatgagcaagtataataaaaataaaaagagctaaatgttgtcaaacatacaatatgcaaactcagtaagaataaatacatttaaaaggaatctgaagaaaaattattcatatgcatgtaacacgaacatttaaaaccaaaatcagtgaattttcaaaactaaatgaagacgcacatgtatgacatttcaatgtagttacctacatacataatatgaatacacacatgtttagattaaattaatttgtacatttggctggagggggggggggggtgacaaaaatgttaaacaagcacctaattacatgaccttcaatatcattgataacggaatatacgcgatataaatagattactagtaacatttattttacatgcaatgtaaaaaaacttatgcactgcactactgcatcattgattgctgttcattgaaattccttatcaaatattttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcataccaattttctttaaattgaattA-ATGTT--A-C--A--GCACCTACC-TA---GG-TGAC--CTTCAAG--ATTATT----AATA-GA-ATAA------ATAT--GCTTGCACTTGATTGGGAAAATTA-AAATA---GA-----AGTA-T-------CATT-CATTTTAC-ATa
gi|10 : gCACCTACC-TA---GG-TGAC--CTTCAAG--ATTATT----AATA-GA-ATAA------ATAT--GC--nnnnnnnnnnnnnnnnnnncacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|11 : gaatgttacagcacctacctaggtgaccttcaagattattaatagaataaatatgcttgcacttgattgggaaaattaaaatagaagtatcattcattttacatnnnnnnnnnnnnnnnnnnnTT-----C--G--ATAAA-T-ATAACTAGATTGCC--AACAAC-CC-TTG-TG--TTATC-TAGTCT-------------------------------------------------------G------TC-CATTCCACA-GACTCAAGA-TTAA-----------ttgcacttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcataatgtcaccatattctgttaacccgctattcaact
gi|12 : actttcatatttaataatctcataaacaaattctatTCATATATTGATT-----TTGA--AAAAA-A-TCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-CA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAtcaattgaacctactttcagttatttcatatgcaagcatttcgtctctatgtctctaaaaaaataggtgggagacgtctatttacattacaatatgtattttataattcag
gi|12 : atgtattacttataatcC--CTT--AG--A-GACT----AATA-G--AGAA------ATGCTTGC--ATA---------------TG-AAATATT-GA-----AGTA-GTCA----AATT-GATTTTAtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctattagtctctaaggattatatgacagacatagcctgtttacatta
gi|13 : atgtattacttataatctcatatattgattttgaaaaaaatcaattagatgtacaaacaaaccctttgtatatatttttctgcccaaataacaatttaaacaatgtgtgtcccttccacaga-ATG------TAT--AGCCTT-------TT---AAA----------------------TCCATT---T---TTGCAT------G-ACACA-----TAAT--------G-C----A-------CAAA--AGAAGCAAAT-A------------TTTC-AATG-AC-GA--TAT-AC-------------GA-CTGTTTG-TTC--TA-AA-------------TA-AAT------------G------------TTT--------------GT-TT----TTATA--AACTACAAGA----TCATG---CA-ATCTT-G-CCTattatatgacagacatagcctgtttacatta
gi|14 : atgaaataaatttgattactatttcatacgtgaaaattttctctagtacgacttaggtgacttatgcTCATA----TATTGAACTT--G--AAAAA-AATCAATTAGAT-GTACAAACAAA-CC-CTT-TG--T-ATA-TA-TTTTT--CTGCC-AA----AA--TA--------ACAATTTAAAC------A-ATGTGTG------TC-CCTTCCACA-GAttgttttttt
gi|16 : cttataatctT-----A-G----C---AAC-AT-------------AC--ATG--TA------CAT----CCGT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACATG-----TAAT--------G-C----AT--TTT-CAAG--AGAAGCACTT-A------------ATTC-AGTA-AT-GA--TAT-AC--AT-G---T--ACATTTGTTTATT-C--TA-AA-------------TA-AATTGTTTGCTTGAAG------------TAT------------AAGA-CA----TAATA--TATT-TAAAA----TCATG---TG-CTCTT-A-CCTGCCtaaaatcaatttgactacttcaatatttcatatgcaagcatttctctatagtctctaaggattatatgacagacatagcctgttacattacac
gi|17 : AACTACA----AGAAGAC-CACATA-T-TTG-AT-T-CTAATGTA--TA-CCTA-CATATCAGCAATCAGTGACTA-TACACATAT-GTTTAGAT-AAATTAATCCTT--G-TACATTTGGC---AGGAA----GGGGGGGGGGGTGTGACAAAAGATGTT--AGCAAA--GCACCTAAT-T----AG-TGACAACTTC-Attt
gi|18 : ttcATCCTAA-CGGT-CGT--GAGTTGGGGTCCTGCCAATGTGT-CATAAGCTTCG--TCA-----AA-ACTCA----GGACCG-T-AA-CATTTAATGATA-AG---ATTGTGGATTTCTTTTTTTCAATATTC--T-TTAGAAGCAAGTGACGC-ATTATGTTTTAAGTGATTTGGACCTAAAAACGGAGGCCCTatgat
gi|19 : A-TAT-G-TAACATGCTACAAAGTGGAA-TAAATAC-ATTTTTTTTAAAAG-AATTTGA-AGAAAAA--GAA-AATTA-TATGCATG---CA-AC-ACAA-ACATTT-ACAAC-AAAGTCTGTGAA-TTT-CAAAACAAAACAATTAAAGAC-CACATA-T-TG
gi|2 : taA-G-A-CATAATG-TTTGTCCACA-ATACA-TAT-GGCAACAT----CAC-GTAAGA-TAAATACTATCT-----AAAAG-ACTCTGA-AGAAAAATAGAA-AATCAATATGCATG---TA-AC-ACGA-ACAT------ACTAAAATCAGTGAAATTT-CAAAACTAAAAA--TGAAAAC-CACATG-T---G-AT-T-C-AAT-TA--TAGC-TA-CATA-CAGTAAT-AGTGAATAGCAC-CAC-T-GATTAGAT-AAATTAAT--TTATG-TACATATGGC---AGGGGTGGGGGGGGGGG----GTGACAAAA--TGTT--A-C--AC-GCACCTAATGTA---AGGTGAC--CTTA-AG--A-TATT----GATA-GGAATAA-------TAC--GC--GTA---------------TA-AAATAC--GA-----AGTATCT-AGTACCATT-TATTTTACGATGCAATGT--AAAAACTTATGCA-TGCACTACTCGCATCA-TGA--TTG-CTGATTT-CA-TGAAAT--TCGC--TTATC--AATATTTTAAA
gi|2 : aaTG----GATT-----T--GGAAAAAA-T-TCAGTTTAAT--TA--AACAA--CC-TTA-TGGTT-ATCCTATTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGTG------TCTCCTTCCAAAAGATTCAAGAATAAA-----------G-T---TTT-----A-A----T---GAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---C-CCTTACGC------T-ACAC------TAAT--------G-C----AT--TTATCAAA--AGAAGCACTT-A------------ATTT-AGTA-ATTGA--TAT-AC--AT-G---T--AAATTTGTTT---TC--TA-AA-------------TA-A--------------G------------TAT------------AAGAACA----TAATA----TT-CAAAA----TCATAATTTG-CTCTT-A-CCTGTCGCGAATAAGCTCAGTGGCCGTGTTAGATCCTAG-AGGT-CGT--GAGTTGGAGTCCTGCCAA--TGT-CAT-AGCTTCGATTCGTTTTAAA-TCTCGC-TC-GA-TGTTAAACCTTTTGATGATA-GGCTAATTGGTT------TTTGTTGAATGTTCGGTA-TAGAAGCAA--GACGCAA-CGGTTTTTA----------AC---AAAACGGAGGCCCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaattggatttggaaaaaattcagtttaattaaacaaccttatggttatcctattttttctgccaaaagtaaacaatatgtgtctccttccaaaagattcaagaataaagttttaatgacacatgtgatacatatcctttttaattcttcccttacgctacactaatgcatttatcaaaagaagcacttaatttagtaattgatatacatgtaaatttgttttctaaataagtataagaacataatattcaaaatcataatttgctcttacctgtcgcgaataagctcagtggccgtgttagatcctagaggtcgtgagttggagtcctgccaatgtcatagcttcgattcgttttaaatctcgctcgatgttaaaccttttgatgataggctaattggtttttgttgaatgttcggtatagaagcaagacgcaacggtttttaacaaaacggaggccct
gi|20 : aaagacataatgtttgtccacaatacatatggcaacatcacgtaagataaatactatctaaaagactctgaagaaaaatagaaaatcaatatgcatgtaacacgaacatactaaaatcagtgaaatttcaaaactaaaaatgaaaaccacatgtgattcaattatagctacatacagtaatagtgaatagcaccactgattagataaattaatttatgtacatatggcaggggtggggggggggggtgacaaaatgttacacgcacctaatgtaaggtgaccttaagatattgataggaataatacgcgtataaaatacgaagtatctagtaccatttattttacgatgcaatgtaaaaacttatgcatgcactactcgcatcatgattgctgatttcatgaaattcgcttatcaatattttaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaacaatttcttcttaaaatT-A------------ATTC-AGTG-AT-GA--TAG--------G---T--ATATTTGTTTATT-C--TA-AA-------------CATAA-------------GCTTTGCTTGACCTAT------------AAGA-CA----TAATA--GATT-TAAAA----TCATG---TGATTCTTGA-CCGGTCACAG-TA-GGTCAGTG
gi|21 : a----CATT-CATTTCAC-ATGCAATGT--AAAAACTCCTGCA-TGAAATACgtggagtgttcgcttcataa
gi|22 : cTTT-AGTA-AT-GA--TAT-AC--AT-G---T--AAATTTGTTTA----------A-------------TATAA-------------G------------TAT------------AAGA-CA----TAATA----TT-CAAAC----TCATG---TG-CGCTT-A-CCTGTCGCGA-TA-GCTCAGCGCACGTGTTAGATCCTAG-AGGT-CGT--GAGTataatgcaaaatgctatagttaataaataactaaacgtcttggtaacaagtgactgttcttggtaatttcaattcagattgctttct
gi|23 : AATGCATTCTGC--AATA-G-AGCATAATG-TT-GTCAAAA-ATACA-TGT-G-TAAAAT----CA--GTAGGA-TAAATA
gi|25 : ctgggttaatttgtatacatttttgcttataaatgaagcagtaatataaaataa-TCCATTAGAT-GTG--GACAAA-CCCTTT-TG--T-AAC-TATTTTTTT-CTGCA-AATATCAACTTA--------A--------AC------A-ATATGTACTAGTATC-CCTTCCATA-GACTCAAGA-TAAA-----------
gi|26 : agA-ATGTT--A-C--A--GCACC-----TA---AG-TGAC--CTTCAAG--C-TATT----AATA-G--A-AG------ATAtacaacatttctttca
gi|27 : cAATACATGCTAT--T-TTTG-AGCAGAATG-TT-GTCCAC--ATACA-TAtatgcttgcacttggtttgctacattgaaaggatggggaaatcaaaatagaagtaccattcattt
gi|28 : gctgcattaatttgtatgagctttttgctattgagtgaagcagtataataaaatatactaaT-A------------ATTC-AGCG-AT-GA--T-------AT-G---T--ATATTTGTTTG-TTC--TA-AACAAAATGTTTGCTTA-AA-------------C------------TAT------------AAGA-CA----AGATA--TATT-TAAAA----TGATG---TG-GTCTT-G-CCTatatgtaa
gi|29 : tatttaAAAA-ATGTT--A-C--A--GCACCTAA--------G-TGAC--CTTCCAG--A-TATT----AATATA--ATGA------ATA-------G-A---------------TA-AAATA---GA-----AGTA-C-------CATT-TATTTTAT-ATGCAATGT--AAAAACTTATGCA-TGAAATAttgtttctt
gi|3 : AATGCATTCTGT--A-TA-G-AGCATAATGGTT-GTCAACA-ATACA-TAT-G-CAACAT----CA--GTACGA-T-AATAC-ATTT-----AAAAA-ATCCTGACGGACAAAT-GAATAATCA-TAT-CATG--GTA-ACAACG--ACATTT-AAGAC-AAAATCAGTGGA-ATT-CAAAACTAAA----TGCAGAC-CACATA-T-TGA-AT-T-C-AATGTA--TA-C-TA-CATA-CAGCAAT-AGTGATTA-CACACATAT-GTTTCGAT-AAATTAAT--TT--G-TACTTTCGGC---AGGAG----GGGGAAGG----GTGACAAAA-ATGTT--A-C--A--GCACCTAAT-TA---AG-TGAC--CTTC-AG--A-TATT----GATA-G--AT-A------ATAC--GT--GTA---------------TA-AAATA---GA-----AGTA-CT-ATAC-CATT-TATTTTAC-ATGCAATGT--AAAAACTTA-GCA-TGTAATACT-GCATCA-TGA--TTG-CTG--TT-CA-TG-AAT--TC-C--TTATC-AAATATTTTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATA----GATT-----T--G---AAAA-T-TCAGTTAAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AG--TA--------A--------AC------A-ATATGTG------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------G-T---TTT-----A-A----T---AAC-AC-------------AT--GTG-ATA------CAT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC------T-ACACG-----TAAT--------G-CATAAAT--TTA-CAAA--AGATGCACTT-A------------ATTT-AGTATGT-GA--TAT-AC--AT-G---T--AAATTTGTTTATTTC--TA-AA-------------TA-AA-------------G------------TAT------------AAGA-CA----TAAT----ATT-CAAAA----TCATG---TG-CTCTT-A-CCTGTCGCGA-TA--CT-AGTGCCC--GTTAGATCCTAG-AGTT-CGTG-GAGTTGGAGTCCTGCCAA--TGT-CAT-AGC--------------AA-CCTCGCATCGGA-TG-TAAA-CTTTTGATGATA-GGCTAATTG---------TTTGTTGAATGTTCGGTATTAGAAGCAA--GACGC-A-CGGGTTTT-----------AC---AAAACGGAGGTCCT
gi|31 : T-A------------ATTC-AGCG-AT-GA--TAT-GT--AC-G--------ATTTGTTTTGTTC--TA-AACAAAATGTTTGCTTA-AA-------------C------------TAT------------AAGA-CA----AGATA--TATT-TAAAA----TGATG---TG-GTCTT-G-CCT
gi|33 : AATGCATTCTGTT-A-TA-G-AGCATAATG-TT-GTCAACA-ATACC-TAT-G-CAAC--------------------ATAC-ATTT-----AAAAG-AATCTGA-AGAAAAA--GAA-ttgtttctt
gi|34 : --TA--------A--------AC------A-ATGTGTG------TC-CCTTCCACA-GACTCAATA-TAAA-----------A-T---
gi|35 : aactATCA-TATGCATG----A-AC-ACGA-ACATT--AAAAC-AAAATCAGTG---------AAAC-AAA----TGAAGAC-CACATATT-TGA-AT-T-C-AATGTA--Tcaatttgaacgctaccttggtattttattatatg
gi|36 : A-CG-TAAA-CTTTCGATGATA-AGCTAATTG---------TTTCTTCAATATTCGGTATTAGAACCAA--GACGC-A-CGGGTTTTA----------gt
gi|38 : TGT--AATA-G-AGCATAATG-T----CAAAA-ATACA-TAT-G-TAAAAT----CA--ATAGGA-TAAATAcg
gi|39 : TCTT--CTGCC-AA----AA--TATCAAGTAAA--------AC------A-ATCTGTA------TC-CTTTCCACA-G
gi|4 : acT--A-TA-G-ACCATAATG-TTTGTCAGCATGTA-A-CAT-G-CTATAAA---CA--GTAGGA-TAAATAT-ATTT-----TAAAG-AATTTGA-AG-AAAAC-GAA-AACCA-TATGCACGCAACACAC-ACAA-ACATTT-AA----AAAATCTGTGAA-TTT-CAAGACAAAA----TAAAGAC-CACATA-T-TGA-ATAT-G-ATTGTT--AA-T-TAGCACA-CACTAATAAATG-CTA-AACACA
gi|4 : tatattgtAAG----TGGATAT-CACATA-C----------C-ACTGTA--TC-C-TA-CACA-CAGCAAT-A--------CACACAGAT-GTTTAGAC-TAATTAAC--TA--G-TACACTTgcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|4 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacA----AATT-----T--G--TAAAA-T-TTAATTACAT-GTA--AAC----CC-TT--TG--T-ATC-TAGTTTTTTTCTGTC-AA----AA--TA--------A--------CC------ACATAAACAA-----TG-CCTTCCACA-GACTCAAGA-TAAA-----------A-TCAATTT-----G-AACCCT---ATT-TC-------------AT--GTGCACG------CAT---TTCTT-------TC---TAAGGACTAGTCGACAGACATAGCGTTT-TTTAAT-TCTTTCCT------T-TCACGACACATAAT--------G-T----AT--CT--------AGAAGCACTC-A------------ATTA-AGTA-TT-GA--T-------AT-G---T--A------TTTATTTC--AA-AA-------------TA-AA-------------A------------TGTTTGTTTGACTAAAAAA-CA----TAATA--GATT-TAAAA----TCATG---TG-ATCTT-G-CATGTtgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaaaatttgtaaaatttaattacatgtaaaccctttgtatctagtttttttctgtcaaaataaccacataaacaatgccttccacagactcaagataaaatcaatttgaaccctatttcatgtgcacgcatttctttctaaggactagtcgacagacatagcgttttttaattctttcctttcacgacacataatgtatctagaagcactcaattaagtattgatatgtatttatttcaaaataaaatgtttgtttgactaaaaaacataatagatttaaaatcatgtgatcttgcatgtaccttcgtttctt
gi|5 : tatattgttatagaccataatgtttgtcagcatgtaacatgctataaacagtaggataaatatattttaaagaatttgaagaaaacgaaaaccatatgcacgcaacacacacaaacatttaaaaaatctgtgaatttcaagacaaaataaagaccacatattgaatatgattgttaattagcacacactaataaatgctaaacacagcaacagatacaaataaattctactaacagcaatagacacaagtggatatcacataccactgtatcctacacacagcaatacacacagatgtttagactaattaactagtacactttgattgtattttctgaaaaaaatcagcatcttcaagttaaaaatatgataaatatacttgcatttataattggttaccttgaaaaggaaggggataactttcattttactttcatttacccttcaaagtattctcatgaacatattgataaACACATATCATTTAGAA-CAATTAAT--TT--GGTACAGTTGGC-----GAGT---GGGGGGGG----GTTACAAAA-CT-------T--A--ACATCTAA--------G-TCAC--CTTC-AAGAA-TAT-----AAT--G--AGAA------A---------GT----------------TA-AAATATTAGA-----AGTA-GT------CATTCTATT--AC-ATGCAATGT--AAAAACTTATGCA-TGAAATTAT-GCCTTG-CAAATTTGCCTG--TT-TATTGCAAT--AA-C--TTA---AAA-ATCTTGAaccttcgtttctt
gi|5 : gcttACT-GCATCA-TAA--TTG-CTG--TTTCA-TGAAAT--TC-C--TTATCAAAATATTTTAAcaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|5 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagTT-----T--G--AAAAA-T-TCAGTTTAAT-GTA--AACAAA-CC-TTA-TG--T-ATC-TAGTTTTT--CTGCC-AA----AAG-TA--------A--------AC------A-ATATGT-------TC-TCTTCCAAA-GATTCAAGA-TAAA-----------AGT---TTG-----A-A----T---AAC-AC-------------AT--GTG-ACA-------AT--ATCCTT-------TT---TAA----------------------TTC-TT---T-CCTTACGC--------ACACG-----TAAT--------G-C----AT--TTA-C-AA--AGAAGCACTT-A------------TTAT-AGT--AT-TA--T-T-ACG-AT-G---CTAACATTTTTTTAT-----AA-AA-------------T--AA-------------G------------TAT------------AA-A-CAAGGTTAATACCTATT-CAACATTATTTATG---TGCATCTT-ACCCTGTtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgattttgaaaaattcagtttaatgtaaacaaaccttatgtatctagtttttctgccaaaagtaaacaatatgttctcttccaaagattcaagataaaagtttgaataacacatgtgacaatatcctttttaattctttccttacgcacacgtaatgcatttacaaagaagcacttattatagtattattacgatgctaacatttttttataaaataagtataaacaaggttaatacctattcaacattatttatgtgcatcttaccctgtttttct
gi|6 : gcttacacatatcatttagaacaattaatttggtacagttggcgagtgggggggggttacaaaacttaacatctaagtcaccttcaagaatataatgagaaagttaaaatattagaagtagtcattctattacatgcaatgtaaaaacttatgcatgaaattatgccttgcaaatttgcctgtttattgcaataacttaaaaatcttgacaacaactgcactatcctgctaatttcaattcagattgctttctctgaattacatcatcaaatgaaactatggttgtacatatgtatttgcaaaaatgtcaaaatattctgttaacccgctattcaactgcagactgcatcataattgctgtttcatgaaattccttatcaaaatattttaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctccttctcatttcactttcacttaagttttcttaaatttgatGCATTCTGTTAA-TA-ACAATA-AATT-TG-GTCAACAGATACA-TATCG-CAACAT----CA--GTAG-A-TAA-TAC-AT-------AAAAG-A-TCTGA-AGAAAAA--AAA-AATCA-TATGCATG--GTA-AC--CGACAGATTTAAAAAA-AAAATCAGTAAG-TTT-TAAAACTAAA----TG-AGAA-CACATA-C-TGA-AT-T-C-AAT-T---TA-C-TA-TATA-TAGCA---------TA-CAC-CATAT-G-TTAGAT-AAA-TAAT--TT--GTTACATTTGGC---A---------AGGGGGG----GTGACAATA-ATGTTC-A-C--GATGCACCTAAT-TAATTAG-TGAC--CTTCAAG--A-TATTTTAAAATA-GA-ATAA------ATAT--AC--GTG---------------T----ATA---GA-----AGTA-C-------CATT-TATTTTAC-ATGCAATGT--AAAAACTT-TGCA-TG-AATA-T-G---TA-TGC--TTG-C-----------AAAATGCTC-TAGTTATT-AAATAACTAAAAAttttct
gi|7 : TT-----T--G--AAAAA-T-CCAATTTCGC-GTA--AACAAATCC-TTC-T---T-ATC-TAGTTTTT--CTTCC-GA----AA--TA--------ACTTAA---AC------A-ATGTGTG------TC-CCTTCCACA-TACTCAAGA-CAAA-----------A-A---TTTAAATGA-A----TTTGAAC-ACT------------AT--TTC-ATATGCAGGCAT--TTCTCTCCATGGATTAGATAACAGACATAGCC-----------TTC-TT---T-CCTTACACGACGTAT-ACATG-----TAATTTAGTACTG-C----ATCTTTA-CTA----GAAGCACTT-ACTACATGTAGTAATTC-AGTA-AT-GAGTCATTACTAAT-GACAT--ACATTTGTTTATTCTAATA-AAATGTTTGCT----TG-AA-------------G------------TGT------------AAAA-CA----TAATG--GATT-TAAAG----GCATG---TG-ATCTT-A-CCT-TCGtcttggacaacaacttgacatattctgctaatttcaattcagattgttttctctgaattacatcaacatactggaacatggttgtacaaatgtatttgcaataatgtcaactattctgttatcgcgctattt
gi|8 : atttacacttcaaagtatatcttatatataatctcatagacaaattgatTT-----T--G--AAAA--T-TCAATTTAGT-GTA--CCCAAT-CC-T-A-TA--T-ATC-TAGTTTCT---TGCCCAA----AA--TA--------A--------CCTTAAAAA-ATATGTG------TC-CTTTAAA-A-GATGCAAGA-TAGAATTTTGAACATA-T---TTT-----ATA----TGCAAAC-ATTTTTTCTCTAAGGATAAGTA-ACA------TATGTATCCTG-------TT---TAA----------------------TTC-TT---T-CCCTACGC------T-GCACG-----CAAT--------GTT----AT--TT--CCAA--GGAACCACTT-A------------GTTC-ATTA-AT-GA--T-T-AG--ATAG---C--ACATATG-CTAATTC--TAGAA-------------TA-GAATGTTTGCTTGTTG------------TAT------------AAGA-CA----TAATAG-AATT-AAAAA----TAAGA---T---TCTT-A-CCTgttc
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): GCAGCAACACAACAACATTTAAAAAAAATTGTGATTCCAGAACAACACACAGTCACATTAATATTAAAACAGAATAGATACAATAATACTACACGCGCTAAAGATGGCAAGTAGTAAAATATTACAATGAGTATAACTACACACACACATACACACAAGCAATGACATACAAGGTTTGGAGTAATAAATTGTAAGCTTGCAGGATATTTGACAAATCTTGCAGCATCTTTCAAGTTGTTAATAATGAGAAATTCTTGCATTTGAATGGTTGCCTTGAAAAAGAAAGGGAAATCAGACAAAAATGTCATTCATT
Unaligned ( gi|15 ): TATAGACAGGCAACACACCCAAAGAACGAAAACAAAACAATTCAAAGATTGCATCTTAAATCAAAATGAATGACTGTCAATACACATACAAATAAATATTACACACATCAACACACATACAAATAAATACTACACGCAGCAATACACAAATAAATACTACACACAGCAACACACATACA
Unaligned ( gi|24 ): GTGGGGGGGGGGAGGGGGTGGTAAAAGATATTTGTTTAAGCGGCAGGCACCTATTTGATTTTTATCGTTGAAGGGGGTATACTATGAAGATGACATATGCTTTAACATTTTTTTAT
Unaligned ( gi|30 ): ATATTACATACAACGAAATATTACACATAGCAATACACAATCAAACAAATATTACACACAAGAATACGCATTTAAATAAATTACACAAACAGCAATACAAACACAA
Unaligned ( gi|32 ): ACATTTGCATTAATGTCGCATATTCTGTTTATCTGCTATTCAAGTTCAAAGGCAGACGCATCAGTACTTGATGTCTCATGAATTCATTATGAAATATTTAAG
Unaligned ( gi|37 ): AAGAACCATTCACTTTACATATATGAAATATGTATGCTTGCAAAATGTTGTAGTTAATAAATAAGTAAA
Unaligned ( gi|40 ): ATTGTTGACCAGTCACGGTAGGTCAGTGGTAGAGAGCTCCGTAA
Unaligned ( gi|41 ): TGCATTTGCGTTAATGTCAACATATTCTGTTTACCTGCTATT