lowQualScore : 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 111111111111111111111111111111 11111111111111111111111111111111111111111 11111111111111111111111111111111 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 22 1 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 11 1 1 3333333333333 22 000000000000000000000000000000 1 222 777777777777777777777777 1 11 222 22 11 111 22 1111 111 1 1 1 333333333 1111 11111111111111111111111111111111111111111 1 1 1 333333333333 11 5555555555555555555555555555 1 1 1111 22222222222222222222222222222222 1 333333 11111 2222 333333 11 33333 111 1 1 1 111 333333333 222222 888888888888888888888888 1 22222 111 333333 11 222222222 1 1111 111 1 1 11111 111 11 1 2222222 2 222222 2 1111 33333333333 11 2222 2 11111111 11 1 1 33333333 222 1 11 222 11 1 11 22222 1 1 1 2222222222222 11 1 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444
lowQualScore : 11 5 6 6 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 2 1 11 0 6 5 4 0000000000000 2 11 6 1 2 6 8 333333333333333333333333333333 3 444 666666666666666666666666 77 0 6 2 1 8 3 88 66 2 0 777 11 8 99 8 8 444 99 2 11 3 88 8 8 5 0 8888 3 222 0 3 0 6 3 5 6 5 3 6 6 8 0 8 1 88 222222222 7777 88888888888888888888888888888888888888888 1 0 99 3 7 77 4 0 0 000000000000 6 44 5555555555555555555555555555 2 1 4 5 3 1 0 8 5 6666 0 11111111111111111111111111111111 1 0 5 1 555555 77777 2222 6 2 8 2 8 9 555555 33 55 2 8 1 3 6 44444 222 0 0 1 2 444 9 000000000 1 77 4 3 1 4 6 3 3 0 5 1 9 888888 5 4 555555555555555555555555 0 1 0 44444 777 8 0 888888 11 1 777777777 7 6 1 6 99 6 4 2 4444 99 3 333 0 99 1 5 7 0 2 88888 0 0 3 2 2 9 33 1 8 444 11 7 5 7777777 0 222222 0 8 5 7777 88888888888 11 1 8 2222 8 1 55555555 44 6 5 1 1 2 4 6 99 22222222 6 444 6 3 5 5 11 111 6 22 5 2 1 88 6 22222 7 4 4 5 3 6 0 8 6666666666666 2 2 3 22 5 3333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 6 6
lowQualScore : .. . . . ............................................................................................................................. . . .. . . . . ............. . .. . . . . . .............................. . ... ........................ .. . . . . . . .. .. . . ... .. . .. . . ... .. . .. . .. . . . . .... . ... . . . . . . . . . . . . . . . .. ......... .... ......................................... . . .. . . .. . . . ............ . .. ............................ . . . . . . . . . .... . ................................ . . . . ...... ..... .... . . . . . . ...... .. .. . . . . . ..... ... . . . . ... . ......... . .. . . . . . . . . . . . ...... . . ........................ . . . ..... ... . . ...... .. . ......... . . . . .. . . . .... .. . ... . .. . . . . . ..... . . . . . . .. . . ... .. . . ....... . ...... . . . .... ........... .. . . .... . . ........ .. . . . . . . . .. ........ . ... . . . . .. ... . .. . . . .. . ..... . . . . . . . . ............. . . . .. . ...................................................................................................................... . .
lowQualScore : 00 0 0 0 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 2 2 00 2 0 0 8 8888888888888 0 55 0 2 2 0 8 000000000000000000000000000000 3 333 333333333333333333333333 77 0 0 5 2 8 5 88 88 2 8 000 00 2 66 8 0 000 22 2 00 2 44 8 0 2 8 0000 5 888 3 3 7 7 5 2 0 8 6 2 4 6 0 0 0 66 000000000 0000 44444444444444444444444444444444444444444 4 0 44 5 2 22 7 8 7 888888888888 7 88 9999999999999999999999999999 8 4 6 4 7 0 4 6 1 5555 7 22222222222222222222222222222222 0 8 0 4 222222 88888 8888 0 2 2 2 7 7 222222 88 22 8 0 4 2 0 88888 888 8 5 3 2 333 3 000000000 8 33 8 3 0 6 0 6 2 6 0 4 0 888888 0 5 888888888888888888888888 2 2 0 00000 555 2 8 000000 00 0 444444444 0 7 0 0 22 7 8 3 2222 22 5 000 3 22 8 4 8 0 5 55555 8 2 5 2 5 5 88 2 0 000 00 8 0 2222222 8 888888 0 0 8 0000 00000000000 00 0 0 0000 2 4 22222222 88 6 0 0 4 8 6 0 22 22222222 7 222 0 2 0 0 00 888 0 22 4 2 4 44 0 44444 0 6 0 0 0 0 5 2 0000000000000 0 5 7 77 0 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 0
consensus : NNNATTACCTCTGCTCCATTAATTTGAAGTTGTACACCGTATTAAATNAACATATACCACTGAACA--T-TA-TATA-----CCAAT-T-----AACA-------GANTCAATGT---TTT-AA---TCANTCTG-------A-----------TTT-----TCTATTTCAGAATCCTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGG---ACCGTTCCNTATAAATACAAAACAGTTACTCAAGTGTTCAACGAAATAA---CAG-A--GTCATTTCCGGANAAAGAAATTCT-CATTTA-TCGAGGCA---TTGA--TGGAANCC-----GGNAAAGCT-TGACTTGCCGTCAACTTCGGACGCAGGCAACAAAGNTAGCAGGCTATCTCATCGGGAAAGGAATTAAGAAGGGGGATACAGTCGCTCTNTTTGGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGNGGTATTGTTGTTCACGTGC-CCTTCAGCAAC-ACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAATT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TCGGA---------TATGATTTCGCA----ACTTAT-ANGCCC-----------ATATC-----------------GAGGAAGAC-TCGAACGTTTCGGCTTTNGTTTTTCTCAGAAAGAGCGAACATCTAACATCC-T---ATGA-TGACCTCCCCGGAATATTACAGNTNGAAGATGAAAGTGAC-GTN---GAATTTCCTACGCTCTACCCCGAGGATGAAATTGTNATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCGATCAAC---GAT-A-----TGTTCGAT----TCC-CCGGGAAAACTTACAATGATCGACCATTTGCTTGGGCGGCCGGATCTCCTATTCTNACAGTGTACCGAGGGCGACCTAGAGTATTCTGCGATTCNTCNATCGCCCCA--GAAGGACATAACACNATGAAAA-TATGGGACGTAATCAAAGAAGAACAGTGCACGTCAGCA---NTATT--NTTACCTTACTTTCTNTCAGATCTGGTGGCNCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA--T-AT-G-TCNTCACAACTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACNAAGANTCTTACAGTCGCATACG------GATCGACCGAGG-NANNNT---C-ATA-TCTNAG--CTTCCGCCTATTA-CTATTGCTGG---TGAAATGAAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GATGGAAATG----TTTTG--AGAAAAGGG-GAGAACGGGG--AGCTTTGTGTTCGAAGCATATGTGGNTTTN-AGAAATACTACAAGAACANAGGCTTAACTGACGAAGTCCTTTTGCCTGGAAAGTGGTTTCGTT-CTG---GCGA--TATTGCGCACAT----A--AATGAAGACAATCATATT-----ATAATAAAAGGG-CGNA--TCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAAT-ATTNCCAAGTAGTATCGAAGAACTCATTANAACAAAGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAATTTGCG--TTTGTTACGTCACAGA--NN--C-AGGGC-A-TGAAATTTCCCCAANCGATGTAAAACAGTTTTG--CCTGGAAANGTTCGTNGGGCACGATGCCATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTTCGATTCCATANTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGNGAATTGACGCCATTCAACAGCTGNAATTGGCTGAT--CAGATGTAAAGCGAACTNTTNATATCAAA----------TGC--T-----TC-------AATA---TAGATGAAC-TTAT-GC---TTTG-AAATTAGCTGAGGTAACGCGATCCTGATTTTTTTCTAACGACTTTTTTTTC--TCCTTGAAATATC
Reference ( gi|1 ) : GTTATTATATCTGCTCCATTACTTTGAAGTCGCACAC--------ATGA---TATATC---GAACA--TGCA-TGTA-----CCAAT-T-----AACA-------GACTCAGTGT---TTT-AA---TCGGTCTG-------A-----------TTT-----TCTATTTTAGAATTGTGTTCGCCATGGCAGATTTCAGTTACCTCTGTACTCCACGG---ACCAAACCTTACACCTATAAAACAATTACTCAGGTCTTCAACGAAAAAAATACAGCG--GTCAATTCCTGATCAATAAATTCT-CATTTA-TAGAGG-A---TTGGACTGGAACCC-----GACAAAGCT-TGACTTGCTGTCAACTTCAGACGCAGGCAAGAAAGTTAGCTAGCTATCTCATTAGAAAAGGAGCGAAGAAGGGAGATAAGATTGCTCTCTCGGGACCAAACA-CT---CTAGAATGGGTGATCACAGAATTAGCAATAATCACTGCGGGGGGTGTTGTTGTTCACTTGC-CTTTCAGCAAT-GCCGATGCCAAAGA--CGTTTACGAAATAGCTTCAGTT-GCTGAATGTAAGGCATTTTTTATTGATCCCGGTAAACGA-GATGAATAT-TTAGA---------TATGATTTTACA----ACTTA--ATGCTT-----------TTATC-----------------GAGGACGAC-TCGAATGTTTCAGCTTTAATTTTCCTCAGACAGAGCGAGCATCTGAAATCT-T---ATGA-TGATCTCTATGGAGTATTAAAGATGGAAGACGAAAGTGAC-GTA---GAGTTTCCTACACTTTACCCAGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAACCTAAAATGATCCCTAAAACACATTTTCACGCCACCAAC---AAT-C-----TGTTCAAC----TCCTCAAAGAAAACTTACAATGATCGCCCATTTGCTTGGATTACAGGATCACCAATTCAAAGAGTGCATCAAGGGGAACCTAGAGTATTCTGCGACTCTTCAATTGCGTTA--GAAGGACACGACACTATGGAAA-TATGGAACGTGATCAGAGAAGAACAGTGCACGTCAGCT---GTATT--ATTACCATACTTTCTATCAGATCTGGTGTCTCACAAAGAAAATTACAAAGATTCCTTCAAACTTGA--TGAT-G-TCATCACAGGTGGACAACTGATTGGCAGTCTCCACACGGAGGTTGTTGGCGTATTTACAAAAACTCTTACAGTCGAATATG------GATCAACTGAGG-AATTCT---CCATA-TCTCAG--CTTCCGCCTATTA-CTACAGCTGG---TAAAATACATTCTGGTG--ACGTAGGAAAAC---CAAAAGCAGGCATAGA-AGTGAAGATCACTG--ATGGA-GACGGTAATG----TTTTG--AAAAAAGAA-GAGAATGGGG--AGCTTTGTATACGAAGAATGTGTGGGTTTC-AGAAATACTACAAGAATACAGGCTTAAATGATGAAGTCCTTTTGCCTGGAAAGTGGTTTCGTT-CTG---GCGA--TATTGCACAGAT----A--AATGAATACAATCATATC-----ATAATCAAAGGG-CGTA--TAAAAG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAAT-TTTGCCAGGTAGTATCGAAAAAGTCATTATAACAATGCATGGTATAAAGAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTGTACGAGGAAGTTTGCG--TTTGTTACGTCACACA--AA--C-AGGGC-T-TGAAATTTCCTCAACCGATGTAAAAGATTTTTG--CCTGGAAAACTTCATTAGGCAAGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCACTTTCAGAGTGTGCCGATGCATGCTAATGGAAAGATCAACAAAAGGAAGCTGAGAATTGATGCCATCCAACAGCTAAAACTGGCAAAC--CTGATGGAAGGCGAACTCTCGATATGAAA----------TGC--T-----TC-------AATA-CATAGATGAATCTTATAGTT--TTTG-GAATCAGCTGA---AATGTG---TTCATTTTTTT-TAA-AATTCCTTTATCTATTTTTAAGATATCC
gi|9 : ATTACCTCTGCTCCATTAATTTGAAGTTGTACACCGTATTAAATTAACATATACCACTGAGCAGATGTAATATT-----CTAAAAT-----AACTTTTTTGTGAGTTAATGTAAATTC-AA---TTGTTCTGGTAATTCA-----------TTTAAATGTCTATTTTAGAGTCTTATTCGTCATGTCAAACCTCAGTTACCTCTCTACTCCACTG---ATCGTTCCATATAAATACAATACAGTTACTCAAGTGTTCAGCGAAACTAACAC-------TCATTCCTTGATAAA-GAATTGTCCATTTAGCCGATG-ATATTTAAAC--GAAGGTTAAAGGACTAAGCTCTGACTTGTCGT----TTCAGAC
gi|2 : gttcag--------ATAA---TATATCA--GTATA--T-TA-TATA-----C-AAT-TTATACAATA-------TAC-CAATGT---TCTGAA---TTAATC-G-------A-----------TTT-----TTAATTTCAGATTCCTGTTGGTCATGTCAGAACTCAGTTATCTATGTGTTCCACAC---ACAGTTCCCTATAAGTACAAAACAGTTATTCAAATATTCAACGAAATAA---CAACATTGTC---TTCAGACAAAGAGATTCT-CATTTA-TCGAGGTA---TTGA--TGGAACCA-----GGGAAAGCC-TGACTTGCCGTCAACTTCGGACACAAGCAACAAAGTTAGCAGGCTATCTAATCAGGAAGGGAATTAAGAAGGGAGACACAATCGCTCTATCGGGGCCTAACA-CC---CTAGAATGGGTGGTAGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACGTGC-CCTTTGGCACC-ACCGACGCCAGAGA--CGTTTATGAGATAGCTTCAATT-GCTGAGTGCAAGGCATTTTTAATAGATCCAGG-AAGAGACGATGAATAT-GTAGA---------CATGAGTTCGCA----ACTTATTACACTTATTAATCGACATTATCTTGGTAAAGACAGCACTGAGGAAGAG-TCGAATGACGTAGCTTTCATTTTTCTCAGAAACAGCGAACATCT---ATCT-TCATATGA-TGACCTTCCTGGGATATTACA-ACGGAAA--GAAAGTGAT-GTT---GAATTCCCAATCCTCTACCCCGAGGATAAAATTGTCATTTTCACGACGTCTGGAAGCACAGGAAAGCCAAAAATGATTCCTAAAACACACTTTCAGGCAGCCAAC---AATACAATGATGTTTGAT----------GAGAAATTTTACAGTGATCGACCATTTGCTTGGGCAGCCGGATCTCCCATTTTCACCGTGTACCGAGGGGTACCTGTAGTATTCTGCTACACATCCGTCGCCACC--GAGGGACATAACACAATGAAAA-TTTGGGAGATAATCAAAGAAGAACAGTGCACATCAGCA---TTATT--CTTACCATACTTTCTTTTAGATCTGATGGCCCAGGAAGAAAACTACAAAGATTCTTTCAAACTTGA--CTCT-G-TCCTCACAACCGGACAGCCTATTAACAATCACCACACGAAGATCGTTGACAAATTTACCAGAATTCTGA------AATATGGATACGGATCAACCGAGA-CATATTGGGC--TT-TTTTA---CTTTCGCCTATTAGCT----CTGATTTTGAAGTGGAAGGCGGTG--ATGTTGGGAAGC---CATTACCAGGCGTAGA-AGTGAAGGTCATTG--ATGGC-GAAGGAAATG----TTTTA--AGGAAAGGG-GAGAATGGAG--AACTTTGCATTCGAAACATATGTGGTTTTG-AGGAGTACTACAAGAATAAAGACTTAACTGAAGAAGTCCTTTTGCCTGGAAAGTGGTTTCGGT-CTG---GTGA--CATTGCCTGTGT----A--AATAAAAACAATCATGTC-----GTAATAAAAGGT-CGGA--TCAAGG-----------ACTGTATTTCTC--GAGGTACAAGG-AAAAT-AATACCCAGTAGTATAGAAGAACTCATTGTAACATTGAATGGTATTAAAAGTGTGACTGTGGTTGGTGTACCTGACAAGCGTTTATACGAAGAAATTTGCG--CTTGCTACGTCACAGA--CC--C-AGAGC-A-GCAGATTGCCCCAAGCGATGTAGAACAGTTTTGTACCAAGAAA--TTCGTAGGACACGATGCTATTGACGGTCTTGGGTCACTGCCAAAATATTTTCTCCGATTCCATGTTTTGCCGACGCTTGGTAATGGCAAGATTGATAAAAGGCAGCTAAGAATTGATGCCATTCAGCAGCTGGGATTGGCTGAT--CAGATGTAAAGCTAACTGTTAAGATCAAA----------TACCAT-----TC-------CTTA----AGGAGAACCTTGT-GCA--TTTGAAAATTAGCTGAGGTAATGCG---CTcatccactctcaggctacactgcaagaaacaattagggcgagttttttacatctaatcgagagggcagttagg
gi|7 : AACA--TTCA-TATAGTATGCCAAT-T-----AA-A-------GATTCA-T-T---TTT-AAAATTCATTCTG-------GTGAATATTTTTTTT-----TTTATTTCAGAAGTCTATTTGTCGTGTCAGAATTTAGTTACCTCTATACTCCACGga
gi|3 : -AG---TCAGTC-A-------A-----------TTC-----TCTTTTTCAGAATCGTGTTCATCATGTCAGAATTGAGTTATCTCTGTGTTCCACGG---ACAATTCCTTACAATTACAAGACAGTTATTCAAGTCTTTAACGAGATAA---CAG-A--ATCATTTCCGGAGAGAGAAATTCT-CATTTA-TCGAGGCG---TTGA--TGGAATCC-----GGAAAAGCT-TAACTTGCCATCAACTTCTGACGCAGGCCACAAAGGTAGCAGGTTATCTCATCGGGAAAGGAATTAGGAAGGGGGATAGAATTGCTTTTTATGCACCCAACA-CC---CTAGAATGGGTGATCGCAGAATTAGGTATAATCATGGCGGGAGGTGTTGTTATTTACGTGGGCTT--AGATATCACCGACGCAAGAGA--GGTATACGAGATAGTTTCAACT-GCTGAGTGCAAAGCCTTTTTGATGGGTCCGGGGAGAAAA-GATGAATAC-GCGGA---------TATGATATCACA----ACTTATCAAGCAC-----------TC--C-----------------GAAAAAGAC-TCGAATCTTTCGATGTTAGATTTTCGCAGAATGAGCGAGCATCTGCCATTA-T---ATGA-CGACCTCCCCGGAATATTACAGCTAGATGCTGC---TGAT-GTG---GAGCTCCCTACACTGTATCCTGAGGATGACGTTGTTGTTTTCACTACGTCTGGAAGTACAGGAAAGCCCAAACTGATCCCAAAGACACACTTTCAAGCAATCAAC---AAT-G------GTATGATA---TTCTCTGAGAAGACTTACAATGATCGACCATTTACTTGGTTGGCCGGGTGTCTTATTTGCACAGTGTACCAAGGATGCGCTAGAATATTTTGCGATTCTTC-ATT-CGCCACCGAAGAACATAAAACCATGAAGA-TATGGGAAATAATCGAAGAAGAAAAGTGCACGTCTGCG---CTTTT--ATCACCTGACTATCTTTCATATCTGGTATCTCAAGGAGAAAATTACAAAAAAGCGTTCAAACTTGA--T-AC-GATCATCACGACTGGACAACTAGCTGACAATCGTCACACGAAGGTCGTTGGCGTATTTACGAGGAGTTTGAAAGTTGCATACG------GATCTACGGAGGCAAGTA----GAATA-TCTGTA--CTTCCACCCATCA-CTATGGCGGG---TGAAATGAGAGCTGGTG--ACGTGGGGATCC---CTATATCAGGTTTAGA-AGTCAAGGTCATTG--ATGAA-GATAAAAATG----TTTTG--AGAAAAGGG-GAGAACGGGG--AGCTATGTGTTCGAAGCATTTGT-GGTTTCGATAAATATTACAAGAACACAGAGTTAACTAATCGTGTCCTTTTGCCGGGAAGGTGGTTTCGTT-CAG---GCGA--CATTGGGCACAT----T--AATGAAGACAATCATATT-----ATAATAAAGGGG-CGGA--TCGCGG-----------ACTGCATTTCCC--GAGGCGCACGG-AAAATAATTCCCA-GTAGCATTGAAGAAGTCATTCAAACAAAGAATGGTATTAAAGATGTCATTGTTCTCGGTGTACCTGACAAGAGTCTACACGAAGAAATTTGCG--TTTGTTACGTCGCATA--TT--C-AGGTT-A-TGAAATTTCACCATTCGATGTAAAACAGTTTTG--CCTGAAATCCTTTGTTGGGGACGAAGCCGTCCATGATTTTGGAAAAATGCCATGGTATTTTCTCCGGTTCCAAAGTCTGCCAATGCTTGCTACTGGTAAGATCAACAAAAGACAGCTGCGAACCGACGCCATTCAACAGTTAGAAATGGCTGAT--CAGTTGTAAGGCGAACTTTTCTTATCAAA----------T-C--TAAATATCCAAACGGAATGCCATAAATGTAT-TGATTGTTTCTTTG-AAATTAACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaacaaatatagcaggttatatcatccggaacggaattaagaagggggataccgttgctctgtttggacccaacactctagaatgggtgatagcagaattagcaataatcatggcagggggagttgttcaaatgtccttcaacgtcaccgatgccagagaggttttcgaaataatctcaattgtt
gi|16 : gttcctcctgatgCATGTCAGAATTCAGCTACCTCTGTACTCCACGAACCACCAAA---TATACATACAAAACTATTACTCAAGTGTTTCACGAAATAA
gi|10 : tAAGCT-TAACTTGCCGTCAACTTCAGACGCAGGCAAGAAAGTTAGCGAGCTATCTCATCAAAAAAGGAATTAAGAAAGGAGATACAGTCGCTCTATTTGGTCCGAACA-GT---CTAGAATGGGTGGTTGGAGAATTAGCGATAATCATGGCGGGTGGCATTGTAGTTCACTTGC-CCTTCAGCAAC-ACTAATGCCAGCGA--CGTTTACGATATCCTTTCAGTT-GCTGATTGCAAGGCTTTTTTGATTGACCCTGGTAAACAA-AATGAATAT-TCAGA---------TATGATTTTAAA----ACTTA--AGGCCC-----------ATATC-----------------GGAGAGTAT-AAGAATATTTCGGCTTTTGTAATACTCAGAAAGAACGAATTTCTAATAGCC-T---ATGA-TGATCTCCCTGGcatcaacatttcc
gi|7 : GCAACAAATATAGCAGGTTATATCATCCGGAACGGAATTAAGAAGGGGGATACCGTTGCTCTGTTTGGACCCAACA-CT---CTAGAATGGGTGATAGCAGAATTAGCAATAATCATGGCAGGGGG---AGTTGTTCAAATGT-CCTTCAACGTC-ACCGATGCCAGAGA--GGTTTTCGAAATAATCTCAATT-GTT
gi|4 : aacattcatatagtatgccaattaaagattcatttttaaaattcattctggtgaatatttttttttttatttcagaagtctatttgtcgtgtcagaatttagttacctctatactccacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTCT-AGGACCAAATATCTGTCCTGTAATGGTTAACCGCCGAATTAGCAATACTTATGACAGGTGATATTGTTGTTCACCTGC-CATTCAGTAAC-ACCGATGCCAGAGAAATATTTAAGAAATAGTTTCAATT-GCAGTGTGCAAGGCCTATTTGATAGACCCTGGCAAAGGA-GAGGAATAT-TTGGA---------TATGATTTTACA----AATCA--ATGCCT-----------ATACA-----------------TAGGAAGAC-TCGAACGTTTCAGCGTTGGTTATTCTCAGAGAAAGCAAACAATT-AACTGTCC---GTGA-TGACAGTCACGGAATATTACAG
gi|11 : GATG---AAGA--TATTCACGGAATTATATCTGTTCGC-GAATGCTAAGTACTTTTCGTTGATCT---TAAAAGA-GGAGAATATCTTAAAATAGCTTTTTATGATTTCGCATTGTATTTA--A--CTA-----------AT-TC-----------------GTTGACAATATCAAACG----ACC--TAACTTT----AGACAGAGCGAGCATTTAACATCC-T---ACTATTAATTTCTTC--AGTATCAAA----CAAGA--------ACTGTAGATGAATTTCCAGCATC-------GAGAATAAAATAGGGATTTTTGCGGAGTCTG----------------TA---------CTAAAACG----TTCAGACGATCAAC---AAT-A-----TG---AAT----TC--TGGGGAAACCTTTTAGTGTTCCACTATTTGCTTGtctactccgaggatgaaattgtgatttttacaacgtctgaaagcacgggaaagcctaaaatgatccctaaaactcatttctatgcaaccaactatgatatgatcttcactgggaaaacaacaatgatcggccattttcttcgacagtcggatctcctattccaacagtgtttcgagggcaacctagagtattctttgattcctccattgcctccgaagagcataacacttggaaaatatggggcgtgatcaaagacgaacagtgcacatcagcaacagcaatcaaataccttatttccttgaagatctggtggaacaaacagataattacaaagattcactcaaatatgaggtgatagtcacaggtggacaactgataaccaatctcgacacataggtcgttgttgtatttaccaagaatcttacaatcacatactgattggctgagggaggattagtttcagtatttccgcttattactacttttggtgagctaaaagctggtgacgtagggaaatcaataccaatcatagaagtaaagatcatcgatgatattgggaatgttttggaaagaaacatgagaaaggggagctttgtatacgaggcatatgtggttttgggaacagacgcttgaatgacgaaatccttttgtctggaatgtcgtttcgttctgacaatattgtgtacataaatgaagacaatcatattatgataaagggtcgtatcaaagactgtatttccaggggtacatgaaaaaattgccatgtagtactcatcacaaagaatggtataaaaatgcgattgtggttggtgtacttgataaacatctccacgaagacatttgcgtttgttattcaacagactctgagcatgaaatttccccaaccgatgtaaaagagttattcctggaaaagttcgttgggcacgatgcaaatggtgaacttgaagaaatgccaaagtatttccttcttttctttaaccttccaatgcttgttaatgggaagatcaataaaa
gi|19 : GAATATTTCGGCTTTTGTATTACTCAGAAAGAACGAATATCTAATAGCC-T---ATGA-TGATCTCCCTGGAGTtgcggcagga
gi|14 : TTACAGTTCGAAGAGAAAACCGAC-TTT---GAATTTCCTACGCTCTACCCCGAGGATGAAATTGTAATTTTCATGACGTCTGGAAGCACAGGGAAGCCTAAAATGATTCCTAAAACACACT
gi|4 : GATGACAGTCAC-G-----GAATAT--TACAGTCTACTCCGAGGATGAAATTGTGATTTTTACAACGTCTGAAAGCACGGGAAAGCCTAAAATGATCCCTAAAACTCATTTCTATGCAACCAACTATGAT-A-----TGATC-------TTCACTGGGAAAACA-ACAATGATCGGCCATTTTCTTCGACAGTCGGATCTCCTATTCCAACAGTGTTTCGAGGGCAACCTAGAGTATTCTTTGATTCCTCCATTGCCTCC--GAAGAGCATAACACT-TGGAAAATATGGGGCGTGATCAAAGACGAACAGTGCACATCAGCAACAGCAATCAAATACCTTATTTCCTTGAAGATCTGGTGGAACAAACAGATAATTACAAAGATTCACTCAAATATGAGGTGAT-A---GTCACAGGTGGACAACTGATAACCAATCTCGACACATAGGTCGTTGTTGTATTTACCAAGAATCTTACAATCACATACT------GATTGGCTGAGG-GAGGAT------TAGTTTCAGTATTTCCGCTTATTA-CTACTTTTGG---TGAGCTAAAAGCTGGTG--ACGTAGGGAAAT---CAATACCAATCATAGA-AGTAAAGATCATCG--ATGAT-ATTGGGAATG----TTTTGGAAAGAAACAT-GAGAAAGGGG--AGCTTTGTATACGAGGCATATGT-GGTTTT-GG-----------GAACAGACGCTTGAATGACGAAATCCTTTTGTCTGGAATGTCGTTTCGTT-CTG---ACAA--TATTGTGTACAT----A--AATGAAGACAATCATATT-----ATGAT-AAAGGGTCGTA--TCAAAG-----------ACTGTATTTCCA--GGGGTACATGA-AAAA--ATTGCCATGTAGTAC--------TCATC---ACAAAGAATGGTATAAA-AATGCGATTGTGGTTGGTGTACTTGATAAACATCTCCACGAAGACATTTGCG--TTTGTTAT-TCA-ACA--GACTC-TGAGC-A-TGAAATTTCCCCAACCGATGTAAAAGAGTTATT--CCTGGAAAAGTTCGTTGGGCACGATGCAAATGGTGAACTTGAAGAAATGCCAAAGTATTTCCTTCTTTTCTTTAACCTTCCAATGCTTGTTAATGGGAAGATCAATAAAA
gi|13 : ctctaggaccaaatatctgtcctgtaatggttaaccgccgaattagcaatacttatgacaggtgatattgttgttcacctgccattcagtaacaccgatgccagagaaatatttaagaaatagtttcaattgcagtgtgcaaggcctatttgatagaccctggcaaaggagaggaatatttggatatgattttacaaatcaatgcctatacataggaagactcgaacgtttcagcgttggttattctcagagaaagcaaacaattaactgtccgtATGAAATTGCAATTTTCACGACCTCTGGAAACACGGGAAACCCTAAAATGGTCCCTAAA-CACACTTTCAGTTCATCAAT---GA---------GT-CAATGACATCCCCCAGGAAAAGTTACAACGATCGGCCATTTACTTGGGTGTTAGGATTTCCTATTCTAACAGTGTATCAAGGACAACCTAGAGTGTTCTGTGAGTCCTCAATTGCCTTA--GAAGG
gi|18 : ACGGGAAAGCCTAAAATGGTCCCT-AAACACACTTTCAGAACATCAA
gi|12 : GTGTACCTTGGGAAACCTATTGTATTTTGTGATTCATCGGTCGC--TACCAATGGACAAAACACAATGAACA-TTTGGAATGCAATCAAGGAAGAACAGTGCACATCGGCA---TTATT--TTTACCTTATTGTCTCTCAGATCTGGTGGCTCATGGCGAAAATTACAAAGATTCATTTCAACTGGA--T-ATGG-TCATCACAACTGGTCAGCTGATTGATAATATCTATACGAAGGTCGTTGGTGTATTTACAAAGGCTCTTACAGTTGtgagtcaatgacatcccccaggaa
gi|8 : tttctccGCGACTCGTCAATTGACCTA--CAAGGACATACCACTATGAAAA-TATGGAACGTGATCAAAGAAGAACAATGCACGTCAGCA---GTATT--ATTACCGTATTTTCTATCAGATCTGGTGACTCACAAAGAAAATTACAAAGATTCCTTCCAACCTGA--TGAA-A-TATTCACAGGTGGACAACTGGTTGGCAGACTCCACACGGAGGTCGTTGGTGTATTTACAAAAACTCTTACAGTCGCCTATG------GAACGACCGAGG-TATTTC---CCATA-TCAGAG--CTTACACCAATTG-CCATTGATGG---TCAAATGCAAGTTGGTG--ACGTAGGAAAAC---CAATGGCCGGTGTGGA-AGTGAAGATCATTG--ATGGA-GATGGAGATG----TTTTG--AGAAAAGGA-GAAAACGGGG--AGCTTTGTGTTCGAAGAATATGTGG
gi|15 : CAGCT------TT--TTTACCTTACTTTTTGTCAGATCTGGTGGCACAGGCAGAGAATTACAAAGATCCATTCAAGCTTGA--T-AT-GTTCACCACAACTGGCCAGTTGATTGACAATt
gi|6 : ggGGTGTCACGTAGGAGCACGCCCATTCCCAGGCCTAGATCGTCAATATCATTAGCATGGATGACAGTAGAGAGGATTTTG--AGAAAAGGGTGAGAATGGGGAAAGCTTT
gi|5 : TGGA-AGTGAAAATCATTG--ATGGA-GATGGAAATG----TTTTG--AGAAAAGGA-GAAAATGGGG--AGCTTTGTGTTCGAAGAATATGTGGTTTTG-AAAAATACTTCAAGAACACAGGCTCACTTGATTAAGTCCTATTGCCTGGAAAGAGGTTCCGTT-CTG---GCGA--TATTGCGCACAT----G--AATGAAAACAATCACATT-----ACAATAAAAGGG-CGAA--TCAAGG-----------ACTGTATTTTCC--GAGGTACAAGG-AAAAT-TTTTCCAAGCAGTATTGAAGAATCCATTAAAACAAAGAATGGAATAAGAGATGTGGCTGTGGTTGGTGTACCTGATAAGCGCCTGTACGAAGAAGTTTGCGTTTTTGTTATGTGACAGA--TC--CGAGGGCAT-TGCAATTTCCCCActgttaaaattgtttggtaaacgatacagcaagttattacttggttttttgaacaaatatctacgaaagaaccacagaaactcatgataacataacgagagtacatcggtttggactgccgatggaaaagatatgtatcgagtatcgtttctgcatgcgacgtattgcgcacattcagagtaataaaacattcatatttgtatataaagaaggggcgtaaatcaaagggtaatcgtgtaatatatttctccagaggtacaaggaaaaataatcccagtagtatcgaggacctcattataacaatgaatgggataaaaaatgtgattgtggttggtgtccctgacaagcgtttatacgaagaagtttgcgtttgttacgtcacagaaacagagcatgaaatttcccaaaccgatgtagaacagttttgtatgaagatgttcgtagggcatgatgccattgatggtcttggagaaatgccaaagtattttcttcgattccacagtctgccattgcttgttagtggaaaaatcaacaaaagacagttgagaattgatgccattcaacagctacaattggctgatcacttataaagcgaact
gi|6 : tgGTATCGTTTCTGCATGCGACGTATTGCGCACATTCAGAGTAATAAA-ACATTCATATTTGTATATAAAGAAGGGG-CGTAAATCAAAGGGTAATCGTGTAATATATTTCTCCAGAGGTACAAGGAAAAAT-AATCCCA-GTAGTATCGAGGACCTCATTATAACAATGAATGGGATAAAAAATGTGATTGTGGTTGGTGTCCCTGACAAGCGTTTATACGAAGAAGTTTGCG--TTTGTTACGTCACAGA--AA--C-AGAGC-A-TGAAATTTCCCAAACCGATGTAGAACAGTTTTG--TATGAAGATGTTCGTAGGGCATGATGCCATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTTCGATTCCACAGTCTGCCATTGCTTGTTAGTGGAAAAATCAACAAAAGACAGTTGAGAATTGATGCCATTCAACAGCTACAATTGGCTGATCACTTAT--AAAGCGAACTttgcgtttgttatgtgacagatccacggggccatgcaatttccccaaaggttttaaaagagttttgcttagaacagtttgtgggacacaatgctattgatggacttggagaaatgccaacatttttccttcaattccataccctgccgatgcttgtcaatggaaagatcaacagaaggcagctgcgacttgacgctattcaacagctgcaattggcagaccagatgtaaagtctactctggatatcaaattagcacctttgttttaagaattagatgatataaatggaaacgtaatcttgatttttttctaacgacttttttttctccttgaaatatc
gi|5 : ggtgtcacgtaggagcacgcccattcccaggcctagatcgtcaatatcattagcatggatgacagtagagaggattttgagaaaagggtgagaatggggaaagctttctgttaaaattgtttggtaaacgatacagcaagttattacttggttttttgaacaaatatctacgaaagaaccacagaaactcatgataacataacgagagtacatcggtttggactgccgatggaaaagatatgtatcgaTTGCG--TTTGTTATGTGACAGATCCA--C-GGGGC-CATGCAATTTCCCCAAAGGTTTTAAAAGAGTTTTG--CTTAGAACAGTTTGTGGGACACAATGCTATTGATGGACTTGGAGAAATGCCAACATTTTTCCTTCAATTCCATACCCTGCCGATGCTTGTCAATGGAAAGATCAACAGAAGGCAGCTGCGACTTGACGCTATTCAACAGCTGCAATTGGCAGAC--CAGATGTAAAGTCTACTCTGGATATCAAATTAGCACCTTTGT--T-----TT-------AAGA-ATTAGATGA----TATA-----------AAT--G--GA---AACGTAATCTTGATTTTTTTCTAACGACTTTTTTTTC--TCCTTGAAATATC
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|17 ): ACATTTGCTTTGCTATTAAACAGAGTCAGAGATGGAACTCATACTGATGAGGACATTAAGATTATTCATGGAAAAGT
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111
lowQualScore : 33333333 11 1111 33333333 22222 1 33333333333333333 111 111 55555555555555555555555555555 111 222222222 1 1 1 22222 11 11 11 111 222222222 999999999999999999999999999999999999999999999 222222222222 6666666666666666666666 1111 2222222222 333333333333 11 111 111 3333333333333333 111 111111 1111 111 11111 11111 1111 222222222222 111 2222222 11111 111 33333333333 11 33333333333333333333333333333333333333333333333 111 5555555555 2222 1 1 22
lowQualScore : 2 3 55555555 1 88 0 9999 33333333 55555 6 0 77777777777777777 7 2 777 8 444 1 77777777777777777777777777777 3 77 222 44 3 8 444444444 6 1 0 0 0 55555 33 33 666 1 11 8 4 1 4 7777 1 6 111 1 2 1 1 5 3 0 999 5 1 1 1 1 7 5 1 6 7777 666666666 0 111111111111111111111111111111111111111111111 1 6 1 6 33 4 1 4 3 5 2 99 3 000000000000 2 66 4 1 1 3 7 1111111111111111111111 2 666 5 2 99 2 99 77 0 1 1 99 22 1 1 1 66 2222 1 1 1 1 1 1 0000000000 33 0 0 1 1 1 1 99 000000000000 1 3 11 8 111 3 3 99 111 1 1 5 77 5 000 5 77 66 2 77 7777777777777777 000 0 666666 1 2222 1 1 6 99 111 1 66666 77 2 6 66666 4444 99 222222222222 6 111 99 1111111 1 2 66666 000 11111111111 99 6 4 1 7 3 1 7 4 1 77 5 22 8888 666 1 2 99 00 1 2 1 1 1 1 1 1 1 1 1 11 99999999999999999999999999999999999999999999999 444 6666666666 0 0 5555 5 5 4 77
lowQualScore : . . ........ . .. . .... ........ ..... . . ................. . . ... . ... . ............................. . .. ... .. . . ......... . . . . . ..... .. .. ... . .. . . . . .... . . ... . . . . . . . ... . . . . . . . . . .... ......... . ............................................. . . . . .. . . . . . . .. . ............ . .. . . . . . ...................... . ... . . .. . .. .. . . . .. .. . . . .. .... . . . . . . .......... .. . . . . . . .. ............ . . .. . ... . . .. ... . . . .. . ... . .. .. . .. ................ ... . ...... . .... . . . .. ... . ..... .. . . ..... .... .. ............ . ... .. ....... . . ..... ... ........... .. . . . . . . . . . .. . .. .... ... . . .. .. . . . . . . . . . . . .. ............................................... ... .......... . . .... . . . ..
lowQualScore : 5 0 55555555 0 00 7 7777 55555555 00000 5 0 00000000000000000 0 5 555 0 000 0 88888888888888888888888888888 2 00 000 66 2 0 222222222 5 0 0 0 5 00000 88 88 000 0 00 0 6 0 6 5555 0 7 777 0 2 0 7 2 7 7 666 7 7 0 0 0 5 7 5 7 0000 777777777 7 333333333333333333333333333333333333333333333 5 7 4 6 77 0 3 9 0 7 7 77 2 222222222222 5 88 8 0 0 2 6 3333333333333333333333 3 444 7 5 33 2 22 33 9 0 0 77 00 0 0 0 77 1111 9 0 0 0 0 0 7777777777 77 7 3 0 0 4 4 00 888888888888 0 2 00 0 888 2 6 22 777 0 7 7 99 7 000 7 99 11 7 99 9999999999999999 000 7 444444 0 7777 0 7 7 22 777 0 77777 77 2 7 77777 2222 22 888888888888 7 777 22 2222222 0 2 77777 222 77777777777 22 7 0 0 2 7 0 5 0 7 99 7 00 3333 111 0 5 22 00 0 2 8 8 0 0 0 0 4 4 0 88 22222222222222222222222222222222222222222222222 888 0000000000 7 7 3333 0 0 0 55
consensus : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA-TGAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCTG-------AT-----------TT-----TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TAA---CAG-NATCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCTGGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTA-T-AC---GCTTA-----------TATC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAACATCCTATGAT-GATCTCCCCGGAGTATTACAGNTGGAAGACGAAANTGACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAAC---GA-T--A------TGAT--ATTCCCCGG-GAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGG--GNAACCTAGAGTATTCTGCGACTCNTCAATCGCC-NCAGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGG-NATTNT---CCATATCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTGAGAA--AAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTTG---AGAAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT--A----AATGAAAACAATCATAT-----TATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGC--T-----TC-------AATGC-ATAGATGNACCTTA-TG-T-C-TTTG-A-AATTAGCTGA-------GG-AACGCG-TCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
Reference ( family-177 ) : NNNATTACCTCTGCTCCATTAATTTGAAGTTGTACACCGTATTAAATNAACATATACCACTGAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCANTCTG-------AT-----------TT-----TCTATTTCAGAATCCTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAAATACAAAACAGTTACTCAAGTGTTCAACGAAA-TAA---CAG-AGTCATTTCCGGANAAAGAAATTCTCATTTA-TCGA-GGCATT-----GA--TGG--AANCCGGNA--AAGCT-TGACTTGCCGTCAACTTCGGACGCAGGCAACAAAGNTAGCAGGCTATCTCATCGGGAAAGGAATTAAGAAGGGGGATACAGTCGCTCTNTTTGGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGNGGTATTGTTGTTCACGTGCCCTTCAGCAACACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAATT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TCGGA---------TATGATTTCGCAACTTA-T-AN---GCCCA-----------TATC-----------------GAGGAAGAC-TCGAACGTTTCGGCTTTNGTTTTTCTCAGAAAGAGCGAACATCTAACATCCTATGAT-GACCTCCCCGGAATATTACAGNTNGAAGATGAAAGTGACGTNGAATTTCCTACGCTCTACCCCGAGGATGAAATTGTNATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCGATCAAC---GA-T--A------TGTTCGATTCCCCGG-GAAAACTTACAATGATCGACCATTTGCTTGGGCGGCCGGATCTCCTATTCTNACAGTGTACCGAGG--GCGACCTAGAGTATTCTGCGATTCNTCNATCGCC-CCAGAAGGACATAACACNATGAAAATATGGGACGTAATCAAAGAAGAACAGTGCACGTCAGCANTATTN-T----TACCTTACTTTCTNTCAGATCTGGTGGCNCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCNTCACAACTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACNAAGANTCTTACAGTCGCATACGGATCGACCGAGG-NANNNT---C-ATATCTNAGC--TTCCGCCTATTA-CTATTGCTGGTGAAATGAAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTGAGAA--AAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGNTTTN---AGAAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT--A----AATGAAGACAATCATAT-----TATAATAAAAGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATATTNCCAAGTAGTATCGAAGAACTCATTANAACAAAGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAATTTGCG--TTTGTTACGTC-ACAGANNC-A--GGGC-A-TGAAATTTCCCCAANCGATGTAAAACAGTTTTG--CCTGGAAANGTTCGTNGGGCACGATGCCATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTTCGATTCCATANTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGNGAATTGACGCCATTCAACAGCTGNAATTGGCTGATCAGATGTAAAGCGAACTNTTNATATCAAATGC--T-----TC-------AAT---ATAGATGAA-CTTA-TG---C-TTTG-A-AATTAGCTGA-------GGTAACGCGATCCTGATTTTTTTCTAACGACTTTTTTTTC--TCCTTGAAATATC
gi|1 : ATTATATCTGCTCCATTACTTTGAAGTCGCACAC--------ATGA---TATATC---GAACA----TGC-ATGTA-----CCAAT-TAACA-------GACT----CAGTGT---TTT-AA---TCGGTCTG-------AT-----------TT-----TCTATTTTAGAATTGTGTTCGCCATGGCAGATTTCAGTTACCTCTGTACTCCACGGACCAAACC--TTACACCTATAAAACAATTACTCAGGTCTTCAACGAAA-AAAATACAGCGGTCAATTCCTGATCAATAAATTCTCATTTA-TAGA-GG-ATT-----GGACTGG--AACCCGACA--AAGCT-TGACTTGCTGTCAACTTCAGACGCAGGCAAGAAAGTTAGCTAGCTATCTCATTAGAAAAGGAGCGAAGAAGGGAGATAAGATTGCTCTCTCGGGACCAAACA-CT---CTAGAATGGGTGATCACAGAATTAGCAATAATCACTGCGGGGGGTGTTGTTGTTCACTTGCCTTTCAGCAATGCCGATGCCAAAGA--CGTTTACGAAATAGCTTCAGTT-GCTGAATGTAAGGCATTTTTTATTGATCCCGGTAAACGA-GATGAATAT-TTAGA---------TATGATTTTACAACTTA---AT---GCTTT-----------TATC-----------------GAGGACGAC-TCGAATGTTTCAGCTTTAATTTTCCTCAGACAGAGCGAGCATCTGAAATCTTATGAT-GATCTCTATGGAGTATTAAAGATGGAAGACGAAAGTGACGTAGAGTTTCCTACACTTTACCCAGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAACCTAAAATGATCCCTAAAACACATTTTCACGCCACCAAC---AA-T--C------TGTTCAACTCCTCAAAGAAAACTTACAATGATCGCCCATTTGCTTGGATTACAGGATCACCAATTCAAAGAGTGCATCAAGG--GGAACCTAGAGTATTCTGCGACTCTTCAATTGCG-TTAGAAGGACACGACACTATGGAAATATGGAACGTGATCAGAGAAGAACAGTGCACGTCAGCTGTATTA-T----TACCATACTTTCTATCAGATCTGGTGTCTCACAAAGAAAATTACAAAGATTCCTTCAAACTTGA-TG--AT-G-TCATCACAGGTGGACAACTGATTGGCAGTCTCCACACGGAGGTTGTTGGCGTATTTACAAAAACTCTTACAGTCGAATATGGATCAACTGAGG-AATTCT---CCATATCTCAGC--TTCCGCCTATTA-CTACAGCTGGTAAAATACATTCTGGTG--ACGTAGGAAAAC---CAAAAGCAGGCATAGA-AGTGAAGATCACTG--ATGGA-GA---CGGTAATG-TTTTGAAAA--AAGAA-GAGAATGGGGA--GCTTTGTATA----------------CGA---AGAA------TGTGTGGGTTTC---AGAAATA-CTAC--AAGAAT---ACAGGCT-----TAAA-TGATGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCACAGAT--A----AATGAATACAATCATAT-----CATAATCAAAGGGCG--TATAAAAG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATTTTGCCAGGTAGTATCGAAAAAGTCATTATAACAATGCATGGTATAAAGAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTGTACGAGGAAGTTTGCG--TTTGTTACGTC-ACACAAAC-A--GGGC-T-TGAAATTTCCTCAACCGATGTAAAAGATTTTTG--CCTGGAAAACTTCATTAGGCAAGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCACTTTCAGAGTGTGCCGATGCATGCTAATGGAAAGATCAACAAAAGGAAGCTGAGAATTGATGCCATCCAACAGCTAAAACTGGCAAACCTGATGGAAGGCGAACTCTCGATATGAAATGC--T-----TC-------AATAC-ATAGATGAATCTTA-TAGT-T-TTTG-G-AATCAGCTGA----------AATGTGTTC---ATTTTTTT-TAA-AATTCCTTTATCTATTTTTAAGATATC
gi|10 : gtt--AAGCT-TAACTTGCCGTCAACTTCAGACGCAGGCAAGAAAGTTAGCGAGCTATCTCATCAAAAAAGGAATTAAGAAAGGAGATACAGTCGCTCTATTTGGTCCGAACA-GT---CTAGAATGGGTGGTTGGAGAATTAGCGATAATCATGGCGGGTGGCATTGTAGTTCACTTGCCCTTCAGCAACACTAATGCCAGCGA--CGTTTACGATATCCTTTCAGTT-GCTGATTGCAAGGCTTTTTTGATTGACCCTGGTAAACAA-AATGAATAT-TCAGA---------TATGATTTTAAAACTTA---AG---GCCCA-----------TATC-----------------GGAGAGTAT-AAGAATATTTCGGCTTTTGTAATACTCAGAAAGAACGAATTTCTAATAGCCTATGAT-GATCTCCCTGGc
gi|11 : AGA--TATTCACGGAATTATATCTGTTCGC-GAATGCTAAGTACTTTTCGTTGATCT---TAAAAGA-GGAGAATATCTTAAAATAGCTTTTTATGATTTCGCA--TTG-T-ATTTAACTAA-----------T-TC-----------------GTTGACAATATCAAACGACCTAACTTT----------AGACAGAGCGAGCATTTAACATCCTACTATTAATTTCTTCAG--TAT--CAAAC--AAGA----ACTGTAGATGAATTTCCAGCAT-------CGAGAATAAAATAGGGATTTTTGCGGAGTCTG----------------TA---------CTAAAACG----TTCAGACGATCAAC---AA-T--A------TG---AATTCTG-GG-GAAACCTTTTAGTGTTCCACTATTTGCTTGTGCGGCAGGA
gi|12 : gatgaTTCT--CCGTGTACCTTGG--GAAACCTATTGTATTTTGTGATTCATCGGTCGCTACCA-ATGGACAAAACACAATGAACATTTGGAATGCAATCAAGGAAGAACAGTGCACATCGGCATTATTT-T----TACCTTATTGTCTCTCAGATCTGGTGGCTCATGGCGAAAATTACAAAGATTCATTTCAACTGGA-T---ATGG-TCATCACAACTGGTCAGCTGATTGATAATATCTATACGAAGGTCGTTGGTGTATTTACAAAGGCTCTTACAGTTG
gi|13 : tATGAAATTGCAATTTTCACGACCTCTGGAAACACGGGAAACCCTAAAATGGTCCCT-AAACACACTTTCAGTTCATCAAT---GAGTCAA------TGAC--ATCCCCCAG-GAAAAGTTACAACGATCGGCCATTTACTTGGGTGTTAGGATTTCCTATTCTAACAGTGTATCAAGG--ACAACCTAGAGTGTTCTGTGAGTCCTCAATTGCC-TTAGAAGG
gi|14 : TTACAGTTCGAAGAGAAAACCGACTTTGAATTTCCTACGCTCTACCCCGAGGATGAAATTGTAATTTTCATGACGTCTGGAAGCACAGGGAAGCCTAAAATGATTCCTAAAACACACT
gi|15 : GCAGCTTTT-T----TACCTTACTTTTTGTCAGATCTGGTGGCACAGGCAGAGAATTACAAAGATCCATTCAAGCTTGA-T---AT-GTTCACCACAACTGGCCAGTTGATTGACAAT
gi|16 : gTCATGTCAGAATTCAGCTACCTCTGTACTCCACGAACCA--CCAAATATACATACAAAACTATTACTCAAGTGTTTCACGAAA-TAA---CAT-CAACATTTCC
gi|18 : ACGGGAAAGCCTAAAATGGTCCCT-AAACACACTTTCAGAACATCAAT---GAGTCAA------TGAC--ATCCCCCAG-GAA
gi|19 : GAATATTTCGGCTTTTGTATTACTCAGAAAGAACGAATATCTAATAGCCTATGAT-GATCTCCCTGGAGT
gi|2 : ATATATCAGT--ATA----T-T-ATATA-----C-AAT-TTATA-------CAATATACCAATGT---TCTGAA---TTAATC-G-------AT-----------TT-----TTAATTTCAGATTCCTGTTGGTCATGTCAGAACTCAGTTATCTATGTGTTCCACACACAGTTCC--CTATAAGTACAAAACAGTTATTCAAATATTCAACGAAA-TAA---CAA-CATTGTCTTCAGACAAAGAGATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCAGGGA--AAGCC-TGACTTGCCGTCAACTTCGGACACAAGCAACAAAGTTAGCAGGCTATCTAATCAGGAAGGGAATTAAGAAGGGAGACACAATCGCTCTATCGGGGCCTAACA-CC---CTAGAATGGGTGGTAGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACGTGCCCTTTGGCACCACCGACGCCAGAGA--CGTTTATGAGATAGCTTCAATT-GCTGAGTGCAAGGCATTTTTAATAGATCCAGG-AAGAGACGATGAATAT-GTAGA---------CATGAGTTCGCAACTTATT-AC---ACTTATTAATCGACATTATCTTGGTAAAGACAGCACTGAGGAAGAG-TCGAATGACGTAGCTTTCATTTTTCTCAGAAACAGCGAACATCTATCTTCATATGAT-GACCTTCCTGGGATATTACAAC-GGAAA--GAAAGTGATGTTGAATTCCCAATCCTCTACCCCGAGGATAAAATTGTCATTTTCACGACGTCTGGAAGCACAGGAAAGCCAAAAATGATTCCTAAAACACACTTTCAGGCAGCCAAC---AA-T--ACAATGATGTTTGAT-----GA-GAAATTTTACAGTGATCGACCATTTGCTTGGGCAGCCGGATCTCCCATTTTCACCGTGTACCGAGG--GGTACCTGTAGTATTCTGCTACACATCCGTCGCC-ACCGAGGGACATAACACAATGAAAATTTGGGAGATAATCAAAGAAGAACAGTGCACATCAGCATTATTC-T----TACCATACTTTCTTTTAGATCTGATGGCCCAGGAAGAAAACTACAAAGATTCTTTCAAACTTGACT---CT-G-TCCTCACAACCGGACAGCCTATTAACAATCACCACACGAAGATCGTTGACAAATTTACCAGAATTCTGAAATATGGATACGGATCAACCGAGA-CATATTGGGC-TT-TTTTA-C--TTTCGCCTATTAGCT-CTGATTTTGAAGTGGAAGGCGGTG--ATGTTGGGAAGC---CATTACCAGGCGTAGA-AGTGAAGGTCATTG--ATGGC-GA---AGGAAATG-TTTTAAGGA--AAGGG-GAGAATGGAGA--ACTTTGCATT----------------CGA---AACA------TATGTGGTTTTG---AGGAGTA-CTAC--AAGAAT---AAAGACT-----TAAC-TGAAGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGGT-CTG---GTGA--CATTGCCTGTGT--A----AATAAAAACAATCATGT-----CGTAATAAAAGGTCG--GATCAAGG-----------ACTGTATTTCTC--GAGGTACAAGG-AAAATAATACCCAGTAGTATAGAAGAACTCATTGTAACATTGAATGGTATTAAAAGTGTGACTGTGGTTGGTGTACCTGACAAGCGTTTATACGAAGAAATTTGCG--CTTGCTACGTC-ACAGACCC-A--GAGC-A-GCAGATTGCCCCAAGCGATGTAGAACAGTTTTGTACCAAGAAA--TTCGTAGGACACGATGCTATTGACGGTCTTGGGTCACTGCCAAAATATTTTCTCCGATTCCATGTTTTGCCGACGCTTGGTAATGGCAAGATTGATAAAAGGCAGCTAAGAATTGATGCCATTCAGCAGCTGGGATTGGCTGATCAGATGTAAAGCTAACTGTTAAGATCAAATACCAT-----TC-------CTT---A-AGGAGAACCTTG-TG---CATTTGAA-AATTAGCTGA-------GGTAATGCG---CTGA
gi|3 : ata-AG---TCAGTC-A-------AT-----------TC-----TCTTTTTCAGAATCGTGTTCATCATGTCAGAATTGAGTTATCTCTGTGTTCCACGGACAATTCC--TTACAATTACAAGACAGTTATTCAAGTCTTTAACGAGA-TAA---CAG-AATCATTTCCGGAGAGAGAAATTCTCATTTA-TCGA-GGCGTT-----GA--TGG--AATCCGGAA--AAGCT-TAACTTGCCATCAACTTCTGACGCAGGCCACAAAGGTAGCAGGTTATCTCATCGGGAAAGGAATTAGGAAGGGGGATAGAATTGCTTTTTATGCACCCAACA-CC---CTAGAATGGGTGATCGCAGAATTAGGTATAATCATGGCGGGAGGTGTTGTTATTTACGTGGGCTTAGATATCACCGACGCAAGAGA--GGTATACGAGATAGTTTCAACT-GCTGAGTGCAAAGCCTTTTTGATGGGTCCGGGGAGAAAA-GATGAATAC-GCGGA---------TATGATATCACAACTTA-TCAA---GC--A-----------CTCC-----------------GAAAAAGAC-TCGAATCTTTCGATGTTAGATTTTCGCAGAATGAGCGAGCATCTGCCATTATATGAC-GACCTCCCCGGAATATTACAGCTAGATGCTG---CTGATGTGGAGCTCCCTACACTGTATCCTGAGGATGACGTTGTTGTTTTCACTACGTCTGGAAGTACAGGAAAGCCCAAACTGATCCCAAAGACACACTTTCAAGCAATCAACAATGG-T--A------TGAT--ATTCTCTGA-GAAGACTTACAATGATCGACCATTTACTTGGTTGGCCGGGTGTCTTATTTGCACAGTGTACCAAGGATGCG--CTAGAATATTTTGCGATTCTTCATTCGCC-ACCGAAGAACATAAAACCATGAAGATATGGGAAATAATCGAAGAAGAAAAGTGCACGTCTGCGCTTTTA-T----CACCTGACTATCTTTCATATCTGGTATCTCAAGGAGAAAATTACAAAAAAGCGTTCAAACTTGA-T---AC-GATCATCACGACTGGACAACTAGCTGACAATCGTCACACGAAGGTCGTTGGCGTATTTACGAGGAGTTTGAAAGTTGCATACGGATCTACGGAGGCAAGTAG---A-ATATCTGTAC--TTCCACCCATCA-CTATGGCGGGTGAAATGAGAGCTGGTG--ACGTGGGGATCC---CTATATCAGGTTTAGA-AGTCAAGGTCATTG--ATGAA-GA---TAAAAATG-TTTTGAGAA--AAGGG-GAGAACGGGGA--GCTATGTGTT----------------CGA---AGCA------TTTGTGGTTTCG---ATAAATA-TTAC--AAGAAC---ACAGAGT-----TAAC-TAATCG-TGTCC-----TTT----TGCC--GGGAAGG----TG------GTTTCGTT-CAG---GCGA--CATTGGGCACAT--T----AATGAAGACAATCATAT-----TATAATAAAGGGGCG--GATCGCGG-----------ACTGCATTTCCC--GAGGCGCACGG-AAAATAATTCCCAGTAGCATTGAAGAAGTCATTCAAACAAAGAATGGTATTAAAGATGTCATTGTTCTCGGTGTACCTGACAAGAGTCTACACGAAGAAATTTGCG--TTTGTTACGTC-GCATATTC-A--GGTT-A-TGAAATTTCACCATTCGATGTAAAACAGTTTTG--CCTGAAATCCTTTGTTGGGGACGAAGCCGTCCATGATTTTGGAAAAATGCCATGGTATTTTCTCCGGTTCCAAAGTCTGCCAATGCTTGCTACTGGTAAGATCAACAAAAGACAGCTGCGAACCGACGCCATTCAACAGTTAGAAATGGCTGATCAGTTGTAAGGCGAACTTTTCTTATCAAAT-C--TAAATATCCAAACGGAATGCCATAAATGTA-TTGATTGTTTC-TTTG-A-AATTAAC
gi|4 : gttcctcctgatgCTCTA---GGACCAAATATCTGTCCTGTAATGGTTAACCGCCGAATTAGCAATACTTATGACAGGTGATATTGTTGTTCACCTGCCATTCAGTAACACCGATGCCAGAGAAATATTTAAGAAATAGTTTCAATT-GCAGTGTGCAAGGCCTATTTGATAGACCCTGGCAAAGGA-GAGGAATAT-TTGGA---------TATGATTTTACAAATCA---AT---GCCTA-----------TACA-----------------TAGGAAGAC-TCGAACGTTTCAGCGTTGGTTATTCTCA----GAGAAAGCA---AACA-------AT-TAACTGTCCG------------T----GATGACAGTCACG--GAATAT--TACAGTCTACTCCGAGGATGAAATTGTGATTTTTACAACGTCTGAAAGCACGGGAAAGCCTAAAATGATCCCTAAAACTCATTTCTATGCAACCAACTATGA-T--A------TGATC--TTCACTGG-GAAAACA-ACAATGATCGGCCATTTTCTTCGACAGTCGGATCTCCTATTCCAACAGTGTTTCGAGG--GCAACCTAGAGTATTCTTTGATTCCTCCATTGCC-TCCGAAGAGCATAACACTTGGAAAATATGGGGCGTGATCAAAGACGAACAGTGCACATCAGCAACAGCAATCAAATACCTTATTTCCTTGAAGATCTGGTGGAACAAACAGATAATTACAAAGATTCACTCAAATATGA-G---GT-GATAGTCACAGGTGGACAACTGATAACCAATCTCGACACATAGGTCGTTGTTGTATTTACCAAGAATCTTACAATCACATACTGATTGGCTGAGG-GAGGAT---T-A-GTTTCAGTATTTCCGCTTATTA-CTACTTTTGGTGAGCTAAAAGCTGGTG--ACGTAGGGAAAT---CAATACCAATCATAGA-AGTAAAGATCATCG--ATGAT-AT---TGGGAATG-TTTTGGAAAGAAACAT-GAGAAAGGGGA--GCTTTGTATA----------------CGA---GGCA------TATGTGGTTTTG---GGAA---------------C---AGACGCT-----TGAA-TGACGA-AATCC-----TTT----TGTC--TGGAATG----TC------GTTTCGTT-CTG---ACAA--TATTGTGTACAT--A----AATGAAGACAATCATAT-----TATGATAAAGGGTCG--TATCAAAG-----------ACTGTATTTCCA--GGGGTACATGA-AAAA-ATTGCCATGTAGTA--------CTCATCA---CAAAGAATGGTATAAAAA-TGCGATTGTGGTTGGTGTACTTGATAAACATCTCCACGAAGACATTTGCG--TTTGTTAT-TCAACAGACTC-T--GAGC-A-TGAAATTTCCCCAACCGATGTAAAAGAGTTATT--CCTGGAAAAGTTCGTTGGGCACGATGCAAATGGTGAACTTGAAGAAATGCCAAAGTATTTCCTTCTTTTCTTTAACCTTCCAATGCTTGTTAATGGGAAGATCAATAAAA
gi|5 : GTGGA-AGTGAAAATCATTG--ATGGA-GA---TGGAAATG-TTTTGAGAA--AAGGA-GAAAATGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGGTTTTG---AAAAATA-CTTC--AAGAAC---ACAGGCT-----CACT-TGATTA-AGTCC-----TAT----TGCC--TGGAAAG----AG------GTTCCGTT-CTG---GCGA--TATTGCGCACAT--G----AATGAAAACAATCACAT-----TACAATAAAAGGGCG--AATCAAGG-----------ACTGTATTTTCC--GAGGTACAAGG-AAAATTTTTCCAAGCAGTATTGAAGAATCCATTAAAACAAAGAATGGAATAAGAGATGTGGCTGTGGTTGGTGTACCTGATAAGCGCCTGTACGAAGAAGTTTGCGTTTTTGTTATGTG-ACAGATCCGA--GGGC-ATTGCAATTTCCCCA
gi|5 : tTTGCG--TTTGTTATGTG-ACAGATCC-ACGGGGCCA-TGCAATTTCCCCAAAGGTTTTAAAAGAGTTTTG--CTTAGAACAGTTTGTGGGACACAATGCTATTGATGGACTTGGAGAAATGCCAACATTTTTCCTTCAATTCCATACCCTGCCGATGCTTGTCAATGGAAAGATCAACAGAAGGCAGCTGCGACTTGACGCTATTCAACAGCTGCAATTGGCAGACCAGATGTAAAGTCTACTCTGGATATCAAAT---------------------T---A-----GCA-CCTT-TG---T-TTTA-AGAATTAGATGATATAAATGGAAACGTAATCTTGATTTTTTTCTAACGACTTTTTTTTC--TCCTTGAAATATCttgcgtttgttatgtgacagatccacggggccatgcaatttccccaaaggttttaaaagagttttgcttagaacagtttgtgggacacaatgctattgatggacttggagaaatgccaacatttttccttcaattccataccctgccgatgcttgtcaatggaaagatcaacagaaggcagctgcgacttgacgctattcaacagctgcaattggcagaccagatgtaaagtctactctggatatcaaattagcacctttgttttaagaattagatgatataaatggaaacgtaatcttgatttttttctaacgacttttttttctccttgaaatatc
gi|6 : tgtggaagtgaaaatcattgatggagatggaaatgttttgagaaaaggagaaaatggggagctttgtgttcgaagaatatgtggttttgaaaaatacttcaagaacacaggctcacttgattaagtcctattgcctggaaagaggttccgttctggcgatattgcgcacatgaatgaaaacaatcacattacaataaaagggcgaatcaaggactgtattttccgaggtacaaggaaaatttttccaagcagtattgaagaatccattaaaacaaagaatggaataagagatgtggctgtggttggtgtacctgataagcgcctgtacgaagaagtttgcgtttttgttatgtgacagatccgagggcattgcaatttccccaGGTGTCACGTAGGAGCACGCCCATTCCCAGGCCTAGATCGTCAATATCATTAGCATGGATGACAGTAGAGAGGATTTTGAGAA--AAGGGTGAGAATGGGGAAAGCTTTCTGTTAAAATTGTTTGGTAAACGATACAGCAAGTTATTACTTGGTTTTTTGAACAAATATCTACGAAAGAACCACAGAAACTCATGATAACATAACGAGAGTACATCGGTTTGGACTGCCGATGGAAAAGATATGTATCGAGTATCGTTTCTGCATGCGACGTATTGCGCACATTCAGAGTAAT-AAAACATTCATATTTGTATATAAAGAAGGGGCGTAAATCAAAGGGTAATCGTGTAATATATTTCTCCAGAGGTACAAGGAAAAATAATCCC-AGTAGTATCGAGGACCTCATTATAACAATGAATGGGATAAAAAATGTGATTGTGGTTGGTGTCCCTGACAAGCGTTTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGAAAC-A--GAGC-A-TGAAATTTCCCAAACCGATGTAGAACAGTTTTG--TATGAAGATGTTCGTAGGGCATGATGCCATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTTCGATTCCACAGTCTGCCATTGCTTGTTAGTGGAAAAATCAACAAAAGACAGTTGAGAATTGATGCCATTCAACAGCTACAATTGGCTGATCACTTATAAAGCGAACT
gi|7 : AACA----T-TCATATAGTATGCCAAT-TAA-A-------GATT----CA-T-T---TTT-AAAATTCATTCTG-------GTGAATATTTTTTTT-----TTTATTTCAGAAGTCTATTTGTCGTGTCAGAATTTAGTTACCTCTATACTCCACG
gi|7 : GCAACAAATATAGCAGGTTATATCATCCGGAACGGAATTAAGAAGGGGGATACCGTTGCTCTGTTTGGACCCAACA-CT---CTAGAATGGGTGATAGCAGAATTAGCAATAATCATGGCAGGGGG-A--GTTGTTCAAATGTCCTTCAACGTCACCGATGCCAGAGA--GGTTTTCGAAATAATCTCAATT-GTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaacaaatatagcaggttatatcatccggaacggaattaagaagggggataccgttgctctgtttggacccaacactctagaatgggtgatagcagaattagcaataatcatggcagggggagttgttcaaatgtccttcaacgtcaccgatgccagagaggttttcgaaataatctcaattgtt
gi|8 : aacattcatatagtatgccaattaaagattcatttttaaaattcattctggtgaatatttttttttttatttcagaagtctatttgtcgtgtcagaatttagttacctctatactccacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCGACTCGTCAATTGAC-CTACAAGGACATACCACTATGAAAATATGGAACGTGATCAAAGAAGAACAATGCACGTCAGCAGTATTA-T----TACCGTATTTTCTATCAGATCTGGTGACTCACAAAGAAAATTACAAAGATTCCTTCCAACCTGA-TGAAAT-A-T--TCACAGGTGGACAACTGGTTGGCAGACTCCACACGGAGGTCGTTGGTGTATTTACAAAAACTCTTACAGTCGCCTATGGAACGACCGAGG-TATTTC---CCATATCAGAGC--TTACACCAATTG-CCATTGATGGTCAAATGCAAGTTGGTG--ACGTAGGAAAAC---CAATGGCCGGTGTGGA-AGTGAAGATCATTG--ATGGA-GA---TGGAGATG-TTTTGAGAA--AAGGA-GAAAACGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGG
gi|9 : ATTACCTCTGCTCCATTAATTTGAAGTTGTACACCGTATTAAATTAACATATACCACTGAGCAGATGT-A-ATATT-----CTAAAATAACTTTTTTGTGAGT----TAATGTAAATTC-AA---TTGTTCTGGTAATTCAT-----------TTAAATGTCTATTTTAGAGTCTTATTCGTCATGTCAAACCTCAGTTACCTCTCTACTCCACTGATCGTTCC--ATATAAATACAATACAGTTACTCAAGTGTTCAGCGAAACTAA---C---ACTCATTCCTTGATAAAGAATTGTCCATTTAGCCGATGATATTTAAACGA--AGGTTAAA---GGACTAAGCTCTGACTTGTCGT----TTCAGACt
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): ACATTTGCTTTGCTATTAAACAGAGTCAGAGATGGAACTCATACTGATGAGGACATTAAGATTATTCATGGAAAAGT
Alignments
lowQualScore : 1111111111111111111111111111111
lowQualScore : 33333333333333 3333333333333333 22222 1 33333333333333333 111 111 666666666666666666666 22222 111 111 222 1 1 22222 11 11 11 111 222222222 9999999999999999999999999999999999999999999 222222222222 3333333333333 111 1111 1111 2222222222 3333333333 11 111 111 3333333333333333 111 111111 111111 111 11111 11111 1111 222222222222 111 2222222 11111 111 33333333333 11 0000000000000000000000000000000 11 111 1 77777777777 2222222 1 1 11
lowQualScore : 1 1 99999999999999 6666666666666666 55555 6 0 77777777777777777 3 2 777 8 444 1 111111111111111111111 00000 1 77 222 11 1 8 444 000 1 0 0 0 7 55555 33 33 6 2 0 11 8 1 1 6 1 6 111 1 2 1 1 1 0 1 0 999 5 1 1 1 1 7 5 1 6 6 666666666 4444444444444444444444444444444444444444444 1 6 11 1 3 4 3 5 0 3 222222222222 1 66 1 1 1 2222222222222 000 0000 1 11 2 1 0 1 1 4 1 1 1 77 2222 1 1 0 1 1 1 0000000000 0 0 0 1 1 1 1 1 6666666666 8 1 3 11 8 0 1 1 1 99 111 1 1 5 77 5 000 5 77 66 2 77 7777777777777777 000 0 666666 222222 6 99 111 1 66666 77 2 6 66666 4444 99 222222222222 6 111 99 1111111 1 0 66666 000 11111111111 99 6 1 1 7 3 1 99 1 7 77 5 22 8888 666 1 1 99 00 1 0 1 1 1 1 0 1 1 1 0 44 3333333333333333333333333333333 1 33 111 4 0 22222222222 0 3333333 5 5 1 88
lowQualScore : . . .............. ................ ..... . . ................. . . ... . ... . ..................... ..... . .. ... .. . . ... ... . . . . . ..... .. .. . . . .. . . . . . . ... . . . . . . . . ... . . . . . . . . . . ......... ........................................... . . .. . . . . . . . ............ . .. . . . ............. ... .... . .. . . . . . . . . . .. .... . . . . . . .......... . . . . . . . . .......... . . . .. . . . . . .. ... . . . .. . ... . .. .. . .. ................ ... . ...... ...... . .. ... . ..... .. . . ..... .... .. ............ . ... .. ....... . . ..... ... ........... .. . . . . . . .. . . .. . .. .... ... . . .. .. . . . . . . . . . . . .. ............................... . .. ... . . ........... . ....... . . . ..
lowQualScore : 0 0 55555555555555 7777777777777777 00000 5 0 00000000000000000 2 5 555 0 000 0 888888888888888888888 00000 0 00 000 66 0 0 000 000 0 8 0 0 0 00000 88 88 5 5 2 00 0 0 0 7 0 7 777 0 2 0 7 0 7 0 7 666 7 7 0 0 0 5 7 5 7 7 777777777 0000000000000000000000000000000000000000000 5 7 99 0 0 9 0 7 7 2 000000000000 0 88 0 7 0 6666666666666 111 9999 0 66 2 0 4 0 0 7 0 0 0 66 1111 9 0 6 0 0 0 7777777777 7 7 3 5 0 4 4 0 6666666666 0 0 2 00 0 8 0 0 0 22 777 0 7 7 99 7 000 7 99 11 7 99 9999999999999999 000 7 444444 888888 7 22 777 0 77777 77 2 7 77777 2222 22 888888888888 7 777 22 2222222 0 3 77777 222 77777777777 22 7 0 0 2 7 0 33 0 8 99 7 77 3333 111 0 0 22 00 0 3 0 0 0 0 6 0 4 4 2 55 5555555555555555555555555555555 0 88 888 2 0 00000000000 7 0000000 0 0 0 55
consensus : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA--GAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCTG-------A-----------TTT-----TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TA---ACAG-NATCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ANGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAACATCCTATGAT-GATCTCCCCGGAGTATTACAGNTGGAAGACGAAANTGACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAAC---GA-T--A---TGAT--ATTCCCC-GGGAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCGCCNCCGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATNTT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT----A--AATGAAAACAATCATATT-----ATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AATN-CATA--GATGNACC--TTGT-GTTTTTG-GAATTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
Reference ( family-177 ) : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA-TGAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCTG-------A-----------TTT-----TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TA---ACAG-NATCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ACGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAACATCCTATGAT-GATCTCCCCGGAGTATTACAGNTGGAAGACGAAANTGACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAAC---GA-T--A---TGAT--ATTCCCC-GGGAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCGCCNCAGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATTNT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT----A--AATGAAAACAATCATATT-----ATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AATG-CATA--GATGNACC--TTAT-GTCTTTG-AAATTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
gi|1 : ATTATATCTGCTCCATTACTTTGAAGTCGCACAC--------ATG---ATATATC---GAACA----TGC-ATGTA-----CCAAT-TAACA-------GACT----CAGTGT---TTT-AA---TCGGTCTG-------A-----------TTT-----TCTATTTTAGAATTGTGTTCGCCATGGCAGATTTCAGTTACCTCTGTACTCCACGGACCAAACC--TTACACCTATAAAACAATTACTCAGGTCTTCAACGAAA-AAAATACAGCGGTCAATTCCTGATCAATAAATTCTCATTTA-TAGA-GG-ATT-----GGACTGG--AACCCGACA--AAGCT-TGACTTGCTGTCAACTTCAGACGCAGGCAAGAAAGTTAGCTAGCTATCTCATTAGAAAAGGAGCGAAGAAGGGAGATAAGATTGCTCTCTCG-GGACCAAACA-CT---CTAGAATGGGTGATCACAGAATTAGCAATAATCACTGCGGGGGGTGTTGTTGTTCACTTGCCTTTCAGCAATGCCGATGCCAAAGA--CGTTTACGAAATAGCTTCAGTT-GCTGAATGTAAGGCATTTTTTATTGATCCCGGTAAACGA-GATGAATAT-TTAGA---------TATGATTTTACAACTTA--ATGCTTT-----------TA--TC-----------------GAGGACGAC-TCGAATGTTTCAGCTTTAATTTTCCTCAGACAGAGCGAGCATCTGAAATCTTATGAT-GATCTCTATGGAGTATTAAAGATGGAAGACGAAAGTGACGTAGAGTTTCCTACACTTTACCCAGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAACCTAAAATGATCCCTAAAACACATTTTCACGCCACCAAC---AA-T--C---TGTTCAACTCCTCAAAGAAAACTTACAATGATCGCCCATTTGCTTGGATTACAGGATCACCAATTCAAAGAGTGCATCAAGGGGAACCTAGAGTATTCTGCGACTCTTCAATTGCGTTAGAAGGACACGACACTATGGAAATATGGAACGTGATCAGAGAAGAACAGTGCACGTCAGCTGTATTA-T----TACCATACTTTCTATCAGATCTGGTGTCTCACAAAGAAAATTACAAAGATTCCTTCAAACTTGA-TG--AT-G-TCATCACAGGTGGACAACTGATTGGCAGTCTCCACACGGAGGTTGTTGGCGTATTTACAAAAACTCTTACAGTCGAATATGGATCAACTGAGGAATTCT---CCATA-TCTCAGC--TTCCGCCTATTA-CTACAGCTGGTAAAATACATTCTGGTG--ACGTAGGAAAAC---CAAAAGCAGGCATAGA-AGTGAAGATCACTG--ATGGA-GA---CGGTAATG-TTTTG--AAAAAAGAA-GAGAATGGGGA--GCTTTGTATA----------------CGA---AGAA------TGTGTGGGTTT--CAG-AAATA-CTAC--AAGAAT---ACAGGCT-----TAAA-TGATGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCACAGAT----A--AATGAATACAATCATATC-----ATAATCAAAGGGCG--TATAAAAG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATTTTGCCAGGTAGTATCGAAAAAGTCATTATAACAATGCATGGTATAAAGAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTGTACGAGGAAGTTTGCG--TTTGTTACGTC-ACACAAAC-A--GGGC-T-TGAAATTTCCTCAACCGATGTAAAAGATTTTTG--CCTGGAAAACTTCATTAGGCAAGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCACTTTCAGAGTGTGCCGATGCATGCTAATGGAAAGATCAACAAAAGGAAGCTGAGAATTGATGCCATCCAACAGCTAAAACTGGCAAACCTGATGGAAGGCGAACTCTCGATATGAAATGCT-----TC-------AATA-CATA--GATGAATC--TTATAGTTTTTG-GAATCAGCTGA-----------AATGT-GTTC--ATTTTTTT-TAA-AATTCCTTTATCTATTTTTAAGATATC
gi|10 : gtt--AAGCT-TAACTTGCCGTCAACTTCAGACGCAGGCAAGAAAGTTAGCGAGCTATCTCATCAAAAAAGGAATTAAGAAAGGAGATACAGTCGCTCTATTT-GGTCCGAACA-GT---CTAGAATGGGTGGTTGGAGAATTAGCGATAATCATGGCGGGTGGCATTGTAGTTCACTTGCCCTTCAGCAACACTAATGCCAGCGA--CGTTTACGATATCCTTTCAGTT-GCTGATTGCAAGGCTTTTTTGATTGACCCTGGTAAACAA-AATGAATAT-TCAGA---------TATGATTTTAAAACTTA--AGGCCCA-----------TA--TC-----------------GGAGAGTAT-AAGAATATTTCGGCTTTTGTAATACTCAGAAAGAACGAATTTCTAATAGCCTATGAT-GATCTCCCTGGc
gi|11 : AGA--TATTCACGGAATTATATCTGTTCGC-GAATGCTAAGTACTTTTCGTTGATCT---TAAAAGA-GGAGAATATCTTAAAATAGCTTTTTATGATTTCGCA--TTGT-AT--TTAAC---------TAATTC-----------------GTTGACAATATCAAA-----CGACCTAACTTT-----AGACAGAGCGAGCATTTAACATCCTACTATTAATTTCTTC--AGTAT--CAAAC--AAGA----ACTGTAGATGAATTTCCAGCAT-------CGAGAATAAAATAGGGATTTTTGCGGAGTCTG----------------TA---------CTAAAACG----TTCAGACGATCAAC---AA-T--A---TGA---ATTCTG--GGGAAACCTTTTAGTGTTCCACTATTTGCTTGTGCGGCAGGA
gi|12 : gatgaGTGTACCTTGGGAAACCTATTGTATTTTGTGATTCATCGGTCGCTACCAATGGACAAAACACAATGAACATTTGGAATGCAATCAAGGAAGAACAGTGCACATCGGCATTATTT-T----TACCTTATTGTCTCTCAGATCTGGTGGCTCATGGCGAAAATTACAAAGATTCATTTCAACTGGA-T---ATGG-TCATCACAACTGGTCAGCTGATTGATAATATCTATACGAAGGTCGTTGGTGTATTTACAAAGGCTCTTACAGTTG
gi|13 : tttctccATGAAATTGCAATTTTCACGACCTCTGGAAACACGGGAAACCCTAAAATGGTCCCTAAA-CACACTTTCAGTTCATCAAT---GAGTCAA---TGAC--ATCCCCC-AGGAAAAGTTACAACGATCGGCCATTTACTTGGGTGTTAGGATTTCCTATTCTAACAGTGTATCAAGGACAACCTAGAGTGTTCTGTGAGTCCTCAATTGCCTTAGAAGG
gi|14 : TTACAGTTCGAAGAGAAAACCGACTTTGAATTTCCTACGCTCTACCCCGAGGATGAAATTGTAATTTTCATGACGTCTGGAAGCACAGGGAAGCCTAAAATGATTCCTAAAACACACT
gi|15 : GCAGCTTTT-T----TACCTTACTTTTTGTCAGATCTGGTGGCACAGGCAGAGAATTACAAAGATCCATTCAAGCTTGA-T---AT-GTTCACCACAACTGGCCAGTTGATTGACAAT
gi|16 : gTCATGTCAGAATTCAGCTACCTCTGTACTCCACGAACCA--CCAAATATACATACAAAACTATTACTCAAGTGTTTCACGAAA-TA---ACAT-CAACATTTCC
gi|18 : ACGGGAAAGCCTAAAATGGTCCCT-AAACACACTTTCAGAACATCAAT---GAGTCAA---TGAC--ATCCCCC-AGGAA
gi|19 : GAATATTTCGGCTTTTGTATTACTCAGAAAGAACGAATATCTAATAGCCTATGAT-GATCTCCCTGGAGT
gi|2 : ATATATCA--GTATA----T-T-ATATA-----C-AAT-TTATA-------CAATATACCAATGT---TCTGAA---TTAATC-G-------A-----------TTT-----TTAATTTCAGATTCCTGTTGGTCATGTCAGAACTCAGTTATCTATGTGTTCCACACACAGTTCC--CTATAAGTACAAAACAGTTATTCAAATATTCAACGAAA-TA---ACAA-CATTGTCTTCAGACAAAGAGATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCAGGGA--AAGCC-TGACTTGCCGTCAACTTCGGACACAAGCAACAAAGTTAGCAGGCTATCTAATCAGGAAGGGAATTAAGAAGGGAGACACAATCGCTCTATCG-GGGCCTAACA-CC---CTAGAATGGGTGGTAGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACGTGCCCTTTGGCACCACCGACGCCAGAGA--CGTTTATGAGATAGCTTCAATT-GCTGAGTGCAAGGCATTTTTAATAGATCCAGG-AAGAGACGATGAATAT-GTAGA---------CATGAGTTCGCAACTTATTACACTTATTAATCGACATTA--TCTTGGTAAAGACAGCACTGAGGAAGAG-TCGAATGACGTAGCTTTCATTTTTCTCAGAAACAGCGAACATCTATCTTCATATGAT-GACCTTCCTGGGATATTACAAC-GGAAA--GAAAGTGATGTTGAATTCCCAATCCTCTACCCCGAGGATAAAATTGTCATTTTCACGACGTCTGGAAGCACAGGAAAGCCAAAAATGATTCCTAAAACACACTTTCAGGCAGCCAAC---AA-T--ACAATGAT--GTTTGAT-GAGAAATTTTACAGTGATCGACCATTTGCTTGGGCAGCCGGATCTCCCATTTTCACCGTGTACCGAGGGGTACCTGTAGTATTCTGCTACACATCCGTCGCCACCGAGGGACATAACACAATGAAAATTTGGGAGATAATCAAAGAAGAACAGTGCACATCAGCATTATTC-T----TACCATACTTTCTTTTAGATCTGATGGCCCAGGAAGAAAACTACAAAGATTCTTTCAAACTTGACT---CT-G-TCCTCACAACCGGACAGCCTATTAACAATCACCACACGAAGATCGTTGACAAATTTACCAGAATTCTGAAATATGGATACGGATCAACCGAGACATATTGGGC--TT-TTTTA-C--TTTCGCCTATTAGCT-CTGATTTTGAAGTGGAAGGCGGTG--ATGTTGGGAAGC---CATTACCAGGCGTAGA-AGTGAAGGTCATTG--ATGGC-GA---AGGAAATG-TTTTA--AGGAAAGGG-GAGAATGGAGA--ACTTTGCATT----------------CGA---AACA------TATGTGGTTTT--GAG-GAGTA-CTAC--AAGAAT---AAAGACT-----TAAC-TGAAGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGGT-CTG---GTGA--CATTGCCTGTGT----A--AATAAAAACAATCATGTC-----GTAATAAAAGGTCG--GATCAAGG-----------ACTGTATTTCTC--GAGGTACAAGG-AAAATAATACCCAGTAGTATAGAAGAACTCATTGTAACATTGAATGGTATTAAAAGTGTGACTGTGGTTGGTGTACCTGACAAGCGTTTATACGAAGAAATTTGCG--CTTGCTACGTC-ACAGACCC-A--GAGC-A-GCAGATTGCCCCAAGCGATGTAGAACAGTTTTGTACCAAGAAA--TTCGTAGGACACGATGCTATTGACGGTCTTGGGTCACTGCCAAAATATTTTCTCCGATTCCATGTTTTGCCGACGCTTGGTAATGGCAAGATTGATAAAAGGCAGCTAAGAATTGATGCCATTCAGCAGCTGGGATTGGCTGATCAGATGTAAAGCTAACTGTTAAGATCAAATAC-------C-------ATTC-CTTAAGGA-GAACC--TTGT-GCATTTGAAAATTAGCTGA--------GGTAATGC-G--CTGA
gi|3 : ata-AG---TCAGTC-A-------A-----------TTC-----TCTTTTTCAGAATCGTGTTCATCATGTCAGAATTGAGTTATCTCTGTGTTCCACGGACAATTCC--TTACAATTACAAGACAGTTATTCAAGTCTTTAACGAGA-TA---ACAG-AATCATTTCCGGAGAGAGAAATTCTCATTTA-TCGA-GGCGTT-----GA--TGG--AATCCGGAA--AAGCT-TAACTTGCCATCAACTTCTGACGCAGGCCACAAAGGTAGCAGGTTATCTCATCGGGAAAGGAATTAGGAAGGGGGATAGAATTGCTTTTTAT-GCACCCAACA-CC---CTAGAATGGGTGATCGCAGAATTAGGTATAATCATGGCGGGAGGTGTTGTTATTTACGTGGGCTTAGATATCACCGACGCAAGAGA--GGTATACGAGATAGTTTCAACT-GCTGAGTGCAAAGCCTTTTTGATGGGTCCGGGGAGAAAA-GATGAATAC-GCGGA---------TATGATATCACAACTTATCAAGC--A-----------CT--CC-----------------GAAAAAGAC-TCGAATCTTTCGATGTTAGATTTTCGCAGAATGAGCGAGCATCTGCCATTATATGAC-GACCTCCCCGGAATATTACAGCTAGATGCTG---CTGATGTGGAGCTCCCTACACTGTATCCTGAGGATGACGTTGTTGTTTTCACTACGTCTGGAAGTACAGGAAAGCCCAAACTGATCCCAAAGACACACTTTCAAGCAATCAACAATGG-T--A---TGAT--ATTCTCT-GAGAAGACTTACAATGATCGACCATTTACTTGGTTGGCCGGGTGTCTTATTTGCACAGTGTACCAAGGATGCGCTAGAATATTTTGCGATTCTTCATTCGCCACCGAAGAACATAAAACCATGAAGATATGGGAAATAATCGAAGAAGAAAAGTGCACGTCTGCGCTTTTA-T----CACCTGACTATCTTTCATATCTGGTATCTCAAGGAGAAAATTACAAAAAAGCGTTCAAACTTGA-T---AC-GATCATCACGACTGGACAACTAGCTGACAATCGTCACACGAAGGTCGTTGGCGTATTTACGAGGAGTTTGAAAGTTGCATACGGATCTACGGAGGCAAGTA---GAATA-TCTGTAC--TTCCACCCATCA-CTATGGCGGGTGAAATGAGAGCTGGTG--ACGTGGGGATCC---CTATATCAGGTTTAGA-AGTCAAGGTCATTG--ATGAA-GA---TAAAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTATGTGTT----------------CGA---AGCA------TTTGTGGTTTC--GAT-AAATA-TTAC--AAGAAC---ACAGAGT-----TAAC-TAATCG-TGTCC-----TTT----TGCC--GGGAAGG----TG------GTTTCGTT-CAG---GCGA--CATTGGGCACAT----T--AATGAAGACAATCATATT-----ATAATAAAGGGGCG--GATCGCGG-----------ACTGCATTTCCC--GAGGCGCACGG-AAAATAATTCCCAGTAGCATTGAAGAAGTCATTCAAACAAAGAATGGTATTAAAGATGTCATTGTTCTCGGTGTACCTGACAAGAGTCTACACGAAGAAATTTGCG--TTTGTTACGTC-GCATATTC-A--GGTT-A-TGAAATTTCACCATTCGATGTAAAACAGTTTTG--CCTGAAATCCTTTGTTGGGGACGAAGCCGTCCATGATTTTGGAAAAATGCCATGGTATTTTCTCCGGTTCCAAAGTCTGCCAATGCTTGCTACTGGTAAGATCAACAAAAGACAGCTGCGAACCGACGCCATTCAACAGTTAGAAATGGCTGATCAGTTGTAAGGCGAACTTTTCTTATCAAAT-CTAAATATCCAAACGGAATGCCATA--AATGTATTGATTGT-TTCTTTG-AAATTAAC
gi|4 : gttcctcctgatgTCTAGGACCAAATATCTGTCCTGTAATGGTTAACCGCCGAATTAGCAATACTTATGACAGGTGATATTGTTGTTCACCTGCCATTCAGTAACACCGATGCCAGAGAAATATTTAAGAAATAGTTTCAATT-GCAGTGTGCAAGGCCTATTTGATAGACCCTGGCAAAGGA-GAGGAATAT-TTGGA---------TATGATTTTACAAATCA--ATGCCTA-----------TA--CA-----------------TAGGAAGAC-TCGAACGTTTCAGCGTTGGTTATTCTCAGAGAA----AGCA---AACA-------AT-TAACTGTCCG------------TG----ATGACAGTCACG--GAATAT--TACAGTCTACTCCGAGGATGAAATTGTGATTTTTACAACGTCTGAAAGCACGGGAAAGCCTAAAATGATCCCTAAAACTCATTTCTATGCAACCAACTATGA-T--A---TGAT--CTTCACT-GGGAAAACA-ACAATGATCGGCCATTTTCTTCGACAGTCGGATCTCCTATTCCAACAGTGTTTCGAGGGCAACCTAGAGTATTCTTTGATTCCTCCATTGCCTCCGAAGAGCATAACACTTGGAAAATATGGGGCGTGATCAAAGACGAACAGTGCACATCAGCAACAGCAATCAAATACCTTATTTCCTTGAAGATCTGGTGGAACAAACAGATAATTACAAAGATTCACTCAAATATGA-G---GT-GATAGTCACAGGTGGACAACTGATAACCAATCTCGACACATAGGTCGTTGTTGTATTTACCAAGAATCTTACAATCACATACTGATTGGCTGAGGGAGGAT------TAGTTTCAGTATTTCCGCTTATTA-CTACTTTTGGTGAGCTAAAAGCTGGTG--ACGTAGGGAAAT---CAATACCAATCATAGA-AGTAAAGATCATCG--ATGAT-AT---TGGGAATG-TTTTGGAAAGAAACAT-GAGAAAGGGGA--GCTTTGTATA----------------CGA---GGCA------TATGTGGTTTT--G----------------GGAAC---AGACGCT-----TGAA-TGACGA-AATCC-----TTT----TGTC--TGGAATG----TC------GTTTCGTT-CTG---ACAA--TATTGTGTACAT----A--AATGAAGACAATCATATT-----ATGATAAAGGGTCG--TATCAAAG-----------ACTGTATTTCCA--GGGGTACATGA-AAAA-ATTGCCATGTAGT--------ACTCATC---ACAAAGAATGGTAT-AAAAATGCGATTGTGGTTGGTGTACTTGATAAACATCTCCACGAAGACATTTGCG--TTTGTTAT-TCAACAGACTC-T--GAGC-A-TGAAATTTCCCCAACCGATGTAAAAGAGTTATT--CCTGGAAAAGTTCGTTGGGCACGATGCAAATGGTGAACTTGAAGAAATGCCAAAGTATTTCCTTCTTTTCTTTAACCTTCCAATGCTTGTTAATGGGAAGATCAATAAAA
gi|5 : cGTGGA-AGTGAAAATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGA-GAAAATGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGGTTTT--GAA-AAATA-CTTC--AAGAAC---ACAGGCT-----CACT-TGATTA-AGTCC-----TAT----TGCC--TGGAAAG----AG------GTTCCGTT-CTG---GCGA--TATTGCGCACAT----G--AATGAAAACAATCACATT-----ACAATAAAAGGGCG--AATCAAGG-----------ACTGTATTTTCC--GAGGTACAAGG-AAAATTTTTCCAAGCAGTATTGAAGAATCCATTAAAACAAAGAATGGAATAAGAGATGTGGCTGTGGTTGGTGTACCTGATAAGCGCCTGTACGAAGAAGTTTGCGTTTTTGTTATGTG-ACAGATCCGA--GGGC-ATTGCAATTTCCCCA
gi|5 : tTTGCG--TTTGTTATGTG-ACAGATCC-ACGGGGCCA-TGCAATTTCCCCAAAGGTTTTAAAAGAGTTTTG--CTTAGAACAGTTTGTGGGACACAATGCTATTGATGGACTTGGAGAAATGCCAACATTTTTCCTTCAATTCCATACCCTGCCGATGCTTGTCAATGGAAAGATCAACAGAAGGCAGCTGCGACTTGACGCTATTCAACAGCTGCAATTGGCAGACCAGATGTAAAGTCTACTCTGGATATCAAAT------------------------TA-----GCACC--TT-T-GTTTTAA-GAATTAGATGATATAAATGGA-AACGTAATCTTGATTTTTTTCTAACGACTTTTTTTTC--TCCTTGAAATATCttgcgtttgttatgtgacagatccacggggccatgcaatttccccaaaggttttaaaagagttttgcttagaacagtttgtgggacacaatgctattgatggacttggagaaatgccaacatttttccttcaattccataccctgccgatgcttgtcaatggaaagatcaacagaaggcagctgcgacttgacgctattcaacagctgcaattggcagaccagatgtaaagtctactctggatatcaaattagcacctttgttttaagaattagatgatataaatggaaacgtaatcttgatttttttctaacgacttttttttctccttgaaatatc
gi|6 : tgtggaagtgaaaatcattgatggagatggaaatgttttgagaaaaggagaaaatggggagctttgtgttcgaagaatatgtggttttgaaaaatacttcaagaacacaggctcacttgattaagtcctattgcctggaaagaggttccgttctggcgatattgcgcacatgaatgaaaacaatcacattacaataaaagggcgaatcaaggactgtattttccgaggtacaaggaaaatttttccaagcagtattgaagaatccattaaaacaaagaatggaataagagatgtggctgtggttggtgtacctgataagcgcctgtacgaagaagtttgcgtttttgttatgtgacagatccgagggcattgcaatttccccaGGTGTCACGTAGGAGCACGCCCATTCCCAGGCCTAGATCGTCAATATCATTAGCATGGATGACAGTAGAGAGGATTTTG--AGAAAAGGGTGAGAATGGGGAAAGCTTTCTGTTAAAATTGTTTGGTAAACGATACAGCAAGTTATTACTTGGTTTTTTGAACAAATATCTACGAAAGAACCACAGAAACTCATGATAACATAACGAGAGTACATCGGTTTGGACTGCCGATGGAAAAGATATGTATCGAGTATCGTTTCTGCATGCGACGTATTGCGCACATTCAGAGTAAT-AAAACATTCATATTTGTATATAAAGAAGGGGCGTAAATCAAAGGGTAATCGTGTAATATATTTCTCCAGAGGTACAAGGAAAAATAATCCC-AGTAGTATCGAGGACCTCATTATAACAATGAATGGGATAAAAAATGTGATTGTGGTTGGTGTCCCTGACAAGCGTTTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGAAAC-A--GAGC-A-TGAAATTTCCCAAACCGATGTAGAACAGTTTTG--TATGAAGATGTTCGTAGGGCATGATGCCATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTTCGATTCCACAGTCTGCCATTGCTTGTTAGTGGAAAAATCAACAAAAGACAGTTGAGAATTGATGCCATTCAACAGCTACAATTGGCTGATCACTTATAAAGCGAACT
gi|7 : AACA----T-TCATATAGTATGCCAAT-TAA-A-------GATT----C-AT-T---TTT-AAAATTCATTCTG-------GTGAATATTTTTTTT-----TTTATTTCAGAAGTCTATTTGTCGTGTCAGAATTTAGTTACCTCTATACTCCACG
gi|7 : GCAACAAATATAGCAGGTTATATCATCCGGAACGGAATTAAGAAGGGGGATACCGTTGCTCTGTTT-GGACCCAACA-CT---CTAGAATGGGTGATAGCAGAATTAGCAATAATCATGGCAGGGGG-A--GTTGTTCAAATGTCCTTCAACGTCACCGATGCCAGAGA--GGTTTTCGAAATAATCTCAATT-GTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaacaaatatagcaggttatatcatccggaacggaattaagaagggggataccgttgctctgtttggacccaacactctagaatgggtgatagcagaattagcaataatcatggcagggggagttgttcaaatgtccttcaacgtcaccgatgccagagaggttttcgaaataatctcaattgtt
gi|8 : aacattcatatagtatgccaattaaagattcatttttaaaattcattctggtgaatatttttttttttatttcagaagtctatttgtcgtgtcagaatttagttacctctatactccacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCGACTCGTCAATTGACCTACAAGGACATACCACTATGAAAATATGGAACGTGATCAAAGAAGAACAATGCACGTCAGCAGTATTA-T----TACCGTATTTTCTATCAGATCTGGTGACTCACAAAGAAAATTACAAAGATTCCTTCCAACCTGA-TGAAAT-A-T--TCACAGGTGGACAACTGGTTGGCAGACTCCACACGGAGGTCGTTGGTGTATTTACAAAAACTCTTACAGTCGCCTATGGAACGACCGAGGTATTTC---CCATA-TCAGAGC--TTACACCAATTG-CCATTGATGGTCAAATGCAAGTTGGTG--ACGTAGGAAAAC---CAATGGCCGGTGTGGA-AGTGAAGATCATTG--ATGGA-GA---TGGAGATG-TTTTG--AGAAAAGGA-GAAAACGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGGT
gi|9 : ATTACCTCTGCTCCATTAATTTGAAGTTGTACACCGTATTAAATTAACATATACCACTGAGCAGATGT-A-ATATT-----CTAAAATAACTTTTTTGTGAGT----TAATGTAAATTC-AA---TTGTTCTGGTAATTCA-----------TTTAAATGTCTATTTTAGAGTCTTATTCGTCATGTCAAACCTCAGTTACCTCTCTACTCCACTGATCGTTCC--ATATAAATACAATACAGTTACTCAAGTGTTCAGCGAAACTA---ACA---CTCATTCCTTGATAAAGAATTGTCCATTTAGCCGATGATATTTAAACGA--AGGTTAA---AGGACTAAGCTCTGACTTGTCGT----TTCAGAC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): ACATTTGCTTTGCTATTAAACAGAGTCAGAGATGGAACTCATACTGATGAGGACATTAAGATTATTCATGGAAAAGT
Alignments
lowQualScore : 1111111111111111111111111111111
lowQualScore : 33333333 11 222 33333333 22222 1 33333333333333333 111 111 666666666666666666666 22222 111 111 1111 1 1 22222 11 11 11 111 222222222 8888888888888888888888888888888888888888888 222222222222 3333333333333 111 1111 2222222222 3333333333 11 111 111 3333333333333333 111 111111 111111 111 11111 11111 1111 222222222222 111 2222222 11111 111 33333333333 11 0000000000000000000000000000000 11 1 1 77777777777 2222222 1 1 11
lowQualScore : 1 1 55555555 1 88 555 33333333 55555 6 0 77777777777777777 3 2 777 8 444 1 111111111111111111111 00000 1 77 222 11 1 8 444 8888 1 0 0 0 7 55555 33 33 6 2 0 11 8 1 1 6 1 6 111 1 2 1 1 1 0 1 0 999 5 1 1 1 1 7 5 1 6 6 666666666 8888888888888888888888888888888888888888888 1 6 11 1 3 4 3 5 0 3 222222222222 1 66 1 1 1 2222222222222 000 555 5 1 11 2 1 0 1 5 1 1 1 1 77 2222 1 1 0 1 1 1 0000000000 0 0 0 1 1 1 1 1 0000000000 8 1 3 11 8 0 1 1 1 99 111 1 1 5 77 5 000 5 77 66 2 77 7777777777777777 000 0 666666 222222 6 99 111 1 66666 77 2 6 66666 4444 99 222222222222 6 111 99 1111111 1 0 66666 000 11111111111 99 6 1 1 7 3 1 99 1 7 77 5 22 8888 666 1 1 99 00 1 0 1 1 1 1 0 1 1 1 0 44 1111111111111111111111111111111 1 33 6 0 1 0 22222222222 0 3333333 5 5 1 88
lowQualScore : . . ........ . .. ... ........ ..... . . ................. . . ... . ... . ..................... ..... . .. ... .. . . ... .... . . . . . ..... .. .. . . . .. . . . . . . ... . . . . . . . . ... . . . . . . . . . . ......... ........................................... . . .. . . . . . . . ............ . .. . . . ............. ... ... . . .. . . . . . . . . . .. .... . . . . . . .......... . . . . . . . . .......... . . . .. . . . . . .. ... . . . .. . ... . .. .. . .. ................ ... . ...... ...... . .. ... . ..... .. . . ..... .... .. ............ . ... .. ....... . . ..... ... ........... .. . . . . . . .. . . .. . .. .... ... . . .. .. . . . . . . . . . . . .. ............................... . .. . . . . ........... . ....... . . . ..
lowQualScore : 0 0 55555555 0 00 777 55555555 00000 5 0 00000000000000000 2 5 555 0 000 0 888888888888888888888 00000 0 00 000 66 0 0 000 8888 0 8 0 0 0 00000 88 88 5 5 2 00 0 0 0 7 0 7 777 0 2 0 7 0 7 0 7 666 7 7 0 0 0 5 7 5 7 7 777777777 7777777777777777777777777777777777777777777 5 7 99 0 0 9 0 7 7 2 000000000000 0 88 0 7 0 6666666666666 111 111 7 0 66 2 0 4 0 7 0 0 0 0 66 1111 9 0 6 0 0 0 7777777777 7 7 3 5 0 4 4 0 0000000000 0 0 2 00 0 8 0 0 0 22 777 0 7 7 99 7 000 7 99 11 7 99 9999999999999999 000 7 444444 888888 7 22 777 0 77777 77 2 7 77777 2222 22 888888888888 7 777 22 2222222 0 3 77777 222 77777777777 22 7 0 0 2 7 0 33 0 8 99 7 77 3333 111 0 0 22 00 0 3 0 0 0 0 6 0 4 4 2 55 5555555555555555555555555555555 0 88 5 0 2 0 00000000000 7 0000000 0 0 0 55
consensus : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA--GAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCTG-------A-----------TTT-----TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TAA---CAGCA-TCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ANGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAACATCCTATGAT-GATCTCCCCGGAGTATTACAGNTGGAAGACGAAANTGACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAAC---GA-T--A---TGAT--ATTCCCCGG-GAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCG-CCNCCGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATNTT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT----A--AATGAAAACAATCATATT-----ATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AAT-CCATA--GATGNACC--TTGT-GTTTTTG-GAATTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
Reference ( family-177 ) : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA--GAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCTG-------A-----------TTT-----TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TAA---CAGNA-TCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ANGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAACATCCTATGAT-GATCTCCCCGGAGTATTACAGNTGGAAGACGAAANTGACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAAC---GA-T--A---TGAT--ATTCCCCGG-GAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCG-CCNCCGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATNTT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT----A--AATGAAAACAATCATATT-----ATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AAT-NCATA--GATGNACC--TTGT-GTTTTTG-GAATTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
gi|1 : ATTATATCTGCTCCATTACTTTGAAGTCGCACAC--------ATGA---TATATC---GAACA----TGC-ATGTA-----CCAAT-TAACA-------GACT----CAGTGT---TTT-AA---TCGGTCTG-------A-----------TTT-----TCTATTTTAGAATTGTGTTCGCCATGGCAGATTTCAGTTACCTCTGTACTCCACGGACCAAACC--TTACACCTATAAAACAATTACTCAGGTCTTCAACGAAA-AAAATACAGCGGTCAATTCCTGATCAATAAATTCTCATTTA-TAGA-GG-ATT-----GGACTGG--AACCCGACA--AAGCT-TGACTTGCTGTCAACTTCAGACGCAGGCAAGAAAGTTAGCTAGCTATCTCATTAGAAAAGGAGCGAAGAAGGGAGATAAGATTGCTCTCTCG-GGACCAAACA-CT---CTAGAATGGGTGATCACAGAATTAGCAATAATCACTGCGGGGGGTGTTGTTGTTCACTTGCCTTTCAGCAATGCCGATGCCAAAGA--CGTTTACGAAATAGCTTCAGTT-GCTGAATGTAAGGCATTTTTTATTGATCCCGGTAAACGA-GATGAATAT-TTAGA---------TATGATTTTACAACTTA--ATGCTTT-----------TA--TC-----------------GAGGACGAC-TCGAATGTTTCAGCTTTAATTTTCCTCAGACAGAGCGAGCATCTGAAATCTTATGAT-GATCTCTATGGAGTATTAAAGATGGAAGACGAAAGTGACGTAGAGTTTCCTACACTTTACCCAGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAACCTAAAATGATCCCTAAAACACATTTTCACGCCACCAAC---AA-T--C---TGTTCAACTCCTCAAAGAAAACTTACAATGATCGCCCATTTGCTTGGATTACAGGATCACCAATTCAAAGAGTGCATCAAGGGGAACCTAGAGTATTCTGCGACTCTTCAATTG-CGTTAGAAGGACACGACACTATGGAAATATGGAACGTGATCAGAGAAGAACAGTGCACGTCAGCTGTATTA-T----TACCATACTTTCTATCAGATCTGGTGTCTCACAAAGAAAATTACAAAGATTCCTTCAAACTTGA-TG--AT-G-TCATCACAGGTGGACAACTGATTGGCAGTCTCCACACGGAGGTTGTTGGCGTATTTACAAAAACTCTTACAGTCGAATATGGATCAACTGAGGAATTCT---CCATA-TCTCAGC--TTCCGCCTATTA-CTACAGCTGGTAAAATACATTCTGGTG--ACGTAGGAAAAC---CAAAAGCAGGCATAGA-AGTGAAGATCACTG--ATGGA-GA---CGGTAATG-TTTTG--AAAAAAGAA-GAGAATGGGGA--GCTTTGTATA----------------CGA---AGAA------TGTGTGGGTTT--CAG-AAATA-CTAC--AAGAAT---ACAGGCT-----TAAA-TGATGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCACAGAT----A--AATGAATACAATCATATC-----ATAATCAAAGGGCG--TATAAAAG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATTTTGCCAGGTAGTATCGAAAAAGTCATTATAACAATGCATGGTATAAAGAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTGTACGAGGAAGTTTGCG--TTTGTTACGTC-ACACAAAC-A--GGGC-T-TGAAATTTCCTCAACCGATGTAAAAGATTTTTG--CCTGGAAAACTTCATTAGGCAAGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCACTTTCAGAGTGTGCCGATGCATGCTAATGGAAAGATCAACAAAAGGAAGCTGAGAATTGATGCCATCCAACAGCTAAAACTGGCAAACCTGATGGAAGGCGAACTCTCGATATGAAATGCT-----TC-------AAT-ACATA--GATGAATC--TTATAGTTTTTG-GAATCAGCTGA-----------AATGT-GTTC--ATTTTTTT-TAA-AATTCCTTTATCTATTTTTAAGATATC
gi|10 : gtt--AAGCT-TAACTTGCCGTCAACTTCAGACGCAGGCAAGAAAGTTAGCGAGCTATCTCATCAAAAAAGGAATTAAGAAAGGAGATACAGTCGCTCTATTT-GGTCCGAACA-GT---CTAGAATGGGTGGTTGGAGAATTAGCGATAATCATGGCGGGTGGCATTGTAGTTCACTTGCCCTTCAGCAACACTAATGCCAGCGA--CGTTTACGATATCCTTTCAGTT-GCTGATTGCAAGGCTTTTTTGATTGACCCTGGTAAACAA-AATGAATAT-TCAGA---------TATGATTTTAAAACTTA--AGGCCCA-----------TA--TC-----------------GGAGAGTAT-AAGAATATTTCGGCTTTTGTAATACTCAGAAAGAACGAATTTCTAATAGCCTATGAT-GATCTCCCTGGc
gi|11 : AGA--TATTCACGGAATTATATCTGTTCGC-GAATGCTAAGTACTTTTCGTTGATCT---TAAAAGA-GGAGAATATCTTAAAATAGCTTTTTATGATTTCGCA--TTGT-AT--TTAAC---------TAATTC-----------------GTTGACAATATCAAA-----CGACCTAACTTT-----AGACAGAGCGAGCATTTAACATCCTACTATTAATTTCTTC--AGTAT--CAAAC--AAGA----ACTGTAGATGAATTTCCAGCAT-------CGAGAATAAAATAGGGATTTTTGCGGAGTCTG----------------TA---------CTAAAACG----TTCAGACGATCAAC---AA-T--A---TGA---ATTCTG-GG-GAAACCTTTTAGTGTTCCACTATTTGCTTGTGCGGCAGGA
gi|12 : gatgaGTGTACCTTGGGAAACCTATTGTATTTTGTGATTCATCGGTCG-CTACCAATGGACAAAACACAATGAACATTTGGAATGCAATCAAGGAAGAACAGTGCACATCGGCATTATTT-T----TACCTTATTGTCTCTCAGATCTGGTGGCTCATGGCGAAAATTACAAAGATTCATTTCAACTGGA-T---ATGG-TCATCACAACTGGTCAGCTGATTGATAATATCTATACGAAGGTCGTTGGTGTATTTACAAAGGCTCTTACAGTTG
gi|13 : tttctccATGAAATTGCAATTTTCACGACCTCTGGAAACACGGGAAACCCTAAAATGGTCCCTAAA-CACACTTTCAGTTCATCAAT---GAGTCAA---TGAC--ATCCCCCAG-GAAAAGTTACAACGATCGGCCATTTACTTGGGTGTTAGGATTTCCTATTCTAACAGTGTATCAAGGACAACCTAGAGTGTTCTGTGAGTCCTCAATTG-CCTTAGAAGG
gi|14 : TTACAGTTCGAAGAGAAAACCGACTTTGAATTTCCTACGCTCTACCCCGAGGATGAAATTGTAATTTTCATGACGTCTGGAAGCACAGGGAAGCCTAAAATGATTCCTAAAACACACT
gi|15 : GCAGCTTTT-T----TACCTTACTTTTTGTCAGATCTGGTGGCACAGGCAGAGAATTACAAAGATCCATTCAAGCTTGA-T---AT-GTTCACCACAACTGGCCAGTTGATTGACAAT
gi|16 : gTCATGTCAGAATTCAGCTACCTCTGTACTCCACGAACCA--CCAAATATACATACAAAACTATTACTCAAGTGTTTCACGAAA-TAA---CATCA-ACATTTCC
gi|18 : ACGGGAAAGCCTAAAATGGTCCCT-AAACACACTTTCAGAACATCAAT---GAGTCAA---TGAC--ATCCCCCAG-GAA
gi|19 : GAATATTTCGGCTTTTGTATTACTCAGAAAGAACGAATATCTAATAGCCTATGAT-GATCTCCCTGGAGT
gi|2 : ATATATCA--GTATA----T-T-ATATA-----C-AAT-TTATA-------CAATATACCAATGT---TCTGAA---TTAATC-G-------A-----------TTT-----TTAATTTCAGATTCCTGTTGGTCATGTCAGAACTCAGTTATCTATGTGTTCCACACACAGTTCC--CTATAAGTACAAAACAGTTATTCAAATATTCAACGAAA-TAA---CAACA-TTGTCTTCAGACAAAGAGATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCAGGGA--AAGCC-TGACTTGCCGTCAACTTCGGACACAAGCAACAAAGTTAGCAGGCTATCTAATCAGGAAGGGAATTAAGAAGGGAGACACAATCGCTCTATCG-GGGCCTAACA-CC---CTAGAATGGGTGGTAGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACGTGCCCTTTGGCACCACCGACGCCAGAGA--CGTTTATGAGATAGCTTCAATT-GCTGAGTGCAAGGCATTTTTAATAGATCCAGG-AAGAGACGATGAATAT-GTAGA---------CATGAGTTCGCAACTTATTACACTTATTAATCGACATTA--TCTTGGTAAAGACAGCACTGAGGAAGAG-TCGAATGACGTAGCTTTCATTTTTCTCAGAAACAGCGAACATCTATCTTCATATGAT-GACCTTCCTGGGATATTACAAC-GGAAA--GAAAGTGATGTTGAATTCCCAATCCTCTACCCCGAGGATAAAATTGTCATTTTCACGACGTCTGGAAGCACAGGAAAGCCAAAAATGATTCCTAAAACACACTTTCAGGCAGCCAAC---AA-T--ACAATGAT--GTTTGATGA-GAAATTTTACAGTGATCGACCATTTGCTTGGGCAGCCGGATCTCCCATTTTCACCGTGTACCGAGGGGTACCTGTAGTATTCTGCTACACATCCGTCG-CCACCGAGGGACATAACACAATGAAAATTTGGGAGATAATCAAAGAAGAACAGTGCACATCAGCATTATTC-T----TACCATACTTTCTTTTAGATCTGATGGCCCAGGAAGAAAACTACAAAGATTCTTTCAAACTTGACT---CT-G-TCCTCACAACCGGACAGCCTATTAACAATCACCACACGAAGATCGTTGACAAATTTACCAGAATTCTGAAATATGGATACGGATCAACCGAGACATATTGGGC--TT-TTTTA-C--TTTCGCCTATTAGCT-CTGATTTTGAAGTGGAAGGCGGTG--ATGTTGGGAAGC---CATTACCAGGCGTAGA-AGTGAAGGTCATTG--ATGGC-GA---AGGAAATG-TTTTA--AGGAAAGGG-GAGAATGGAGA--ACTTTGCATT----------------CGA---AACA------TATGTGGTTTT--GAG-GAGTA-CTAC--AAGAAT---AAAGACT-----TAAC-TGAAGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGGT-CTG---GTGA--CATTGCCTGTGT----A--AATAAAAACAATCATGTC-----GTAATAAAAGGTCG--GATCAAGG-----------ACTGTATTTCTC--GAGGTACAAGG-AAAATAATACCCAGTAGTATAGAAGAACTCATTGTAACATTGAATGGTATTAAAAGTGTGACTGTGGTTGGTGTACCTGACAAGCGTTTATACGAAGAAATTTGCG--CTTGCTACGTC-ACAGACCC-A--GAGC-A-GCAGATTGCCCCAAGCGATGTAGAACAGTTTTGTACCAAGAAA--TTCGTAGGACACGATGCTATTGACGGTCTTGGGTCACTGCCAAAATATTTTCTCCGATTCCATGTTTTGCCGACGCTTGGTAATGGCAAGATTGATAAAAGGCAGCTAAGAATTGATGCCATTCAGCAGCTGGGATTGGCTGATCAGATGTAAAGCTAACTGTTAAGATCAAATAC-------C-------ATT-CCTTAAGGA-GAACC--TTGT-GCATTTGAAAATTAGCTGA--------GGTAATGC-G--CTGA
gi|3 : ata-AG---TCAGTC-A-------A-----------TTC-----TCTTTTTCAGAATCGTGTTCATCATGTCAGAATTGAGTTATCTCTGTGTTCCACGGACAATTCC--TTACAATTACAAGACAGTTATTCAAGTCTTTAACGAGA-TAA---CAGAA-TCATTTCCGGAGAGAGAAATTCTCATTTA-TCGA-GGCGTT-----GA--TGG--AATCCGGAA--AAGCT-TAACTTGCCATCAACTTCTGACGCAGGCCACAAAGGTAGCAGGTTATCTCATCGGGAAAGGAATTAGGAAGGGGGATAGAATTGCTTTTTAT-GCACCCAACA-CC---CTAGAATGGGTGATCGCAGAATTAGGTATAATCATGGCGGGAGGTGTTGTTATTTACGTGGGCTTAGATATCACCGACGCAAGAGA--GGTATACGAGATAGTTTCAACT-GCTGAGTGCAAAGCCTTTTTGATGGGTCCGGGGAGAAAA-GATGAATAC-GCGGA---------TATGATATCACAACTTATCAAGC--A-----------CT--CC-----------------GAAAAAGAC-TCGAATCTTTCGATGTTAGATTTTCGCAGAATGAGCGAGCATCTGCCATTATATGAC-GACCTCCCCGGAATATTACAGCTAGATGCTG---CTGATGTGGAGCTCCCTACACTGTATCCTGAGGATGACGTTGTTGTTTTCACTACGTCTGGAAGTACAGGAAAGCCCAAACTGATCCCAAAGACACACTTTCAAGCAATCAACAATGG-T--A---TGAT--ATTCTCTGA-GAAGACTTACAATGATCGACCATTTACTTGGTTGGCCGGGTGTCTTATTTGCACAGTGTACCAAGGATGCGCTAGAATATTTTGCGATTCTTCATTCG-CCACCGAAGAACATAAAACCATGAAGATATGGGAAATAATCGAAGAAGAAAAGTGCACGTCTGCGCTTTTA-T----CACCTGACTATCTTTCATATCTGGTATCTCAAGGAGAAAATTACAAAAAAGCGTTCAAACTTGA-T---AC-GATCATCACGACTGGACAACTAGCTGACAATCGTCACACGAAGGTCGTTGGCGTATTTACGAGGAGTTTGAAAGTTGCATACGGATCTACGGAGGCAAGTA---GAATA-TCTGTAC--TTCCACCCATCA-CTATGGCGGGTGAAATGAGAGCTGGTG--ACGTGGGGATCC---CTATATCAGGTTTAGA-AGTCAAGGTCATTG--ATGAA-GA---TAAAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTATGTGTT----------------CGA---AGCA------TTTGTGGTTTC--GAT-AAATA-TTAC--AAGAAC---ACAGAGT-----TAAC-TAATCG-TGTCC-----TTT----TGCC--GGGAAGG----TG------GTTTCGTT-CAG---GCGA--CATTGGGCACAT----T--AATGAAGACAATCATATT-----ATAATAAAGGGGCG--GATCGCGG-----------ACTGCATTTCCC--GAGGCGCACGG-AAAATAATTCCCAGTAGCATTGAAGAAGTCATTCAAACAAAGAATGGTATTAAAGATGTCATTGTTCTCGGTGTACCTGACAAGAGTCTACACGAAGAAATTTGCG--TTTGTTACGTC-GCATATTC-A--GGTT-A-TGAAATTTCACCATTCGATGTAAAACAGTTTTG--CCTGAAATCCTTTGTTGGGGACGAAGCCGTCCATGATTTTGGAAAAATGCCATGGTATTTTCTCCGGTTCCAAAGTCTGCCAATGCTTGCTACTGGTAAGATCAACAAAAGACAGCTGCGAACCGACGCCATTCAACAGTTAGAAATGGCTGATCAGTTGTAAGGCGAACTTTTCTTATCAAAT-CTAAATATCCAAACGGAATGCCATA--AATGTATTGATTGT-TTCTTTG-AAATTAAC
gi|4 : gttcctcctgatgTCTAGGACCAAATATCTGTCCTGTAATGGTTAACCGCCGAATTAGCAATACTTATGACAGGTGATATTGTTGTTCACCTGCCATTCAGTAACACCGATGCCAGAGAAATATTTAAGAAATAGTTTCAATT-GCAGTGTGCAAGGCCTATTTGATAGACCCTGGCAAAGGA-GAGGAATAT-TTGGA---------TATGATTTTACAAATCA--ATGCCTA-----------TA--CA-----------------TAGGAAGAC-TCGAACGTTTCAGCGTTGGTTATTCTCAGAGAA----AGCA---AACA-------AT-TAACTGTCCG------------TG----ATGACAGTCACG--GAATAT--TACAGTCTACTCCGAGGATGAAATTGTGATTTTTACAACGTCTGAAAGCACGGGAAAGCCTAAAATGATCCCTAAAACTCATTTCTATGCAACCAACTATGA-T--A---TGAT--CTTCACTGG-GAAAACA-ACAATGATCGGCCATTTTCTTCGACAGTCGGATCTCCTATTCCAACAGTGTTTCGAGGGCAACCTAGAGTATTCTTTGATTCCTCCATTG-CCTCCGAAGAGCATAACACTTGGAAAATATGGGGCGTGATCAAAGACGAACAGTGCACATCAGCAACAGCAATCAAATACCTTATTTCCTTGAAGATCTGGTGGAACAAACAGATAATTACAAAGATTCACTCAAATATGA-G---GT-GATAGTCACAGGTGGACAACTGATAACCAATCTCGACACATAGGTCGTTGTTGTATTTACCAAGAATCTTACAATCACATACTGATTGGCTGAGGGAGGAT------TAGTTTCAGTATTTCCGCTTATTA-CTACTTTTGGTGAGCTAAAAGCTGGTG--ACGTAGGGAAAT---CAATACCAATCATAGA-AGTAAAGATCATCG--ATGAT-AT---TGGGAATG-TTTTGGAAAGAAACAT-GAGAAAGGGGA--GCTTTGTATA----------------CGA---GGCA------TATGTGGTTTT--G----------------GGAAC---AGACGCT-----TGAA-TGACGA-AATCC-----TTT----TGTC--TGGAATG----TC------GTTTCGTT-CTG---ACAA--TATTGTGTACAT----A--AATGAAGACAATCATATT-----ATGATAAAGGGTCG--TATCAAAG-----------ACTGTATTTCCA--GGGGTACATGA-AAAA-ATTGCCATGTAGT--------ACTCATC---ACAAAGAATGGTAT-AAAAATGCGATTGTGGTTGGTGTACTTGATAAACATCTCCACGAAGACATTTGCG--TTTGTTAT-TCAACAGACTC-T--GAGC-A-TGAAATTTCCCCAACCGATGTAAAAGAGTTATT--CCTGGAAAAGTTCGTTGGGCACGATGCAAATGGTGAACTTGAAGAAATGCCAAAGTATTTCCTTCTTTTCTTTAACCTTCCAATGCTTGTTAATGGGAAGATCAATAAAA
gi|5 : cGTGGA-AGTGAAAATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGA-GAAAATGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGGTTTT--GAA-AAATA-CTTC--AAGAAC---ACAGGCT-----CACT-TGATTA-AGTCC-----TAT----TGCC--TGGAAAG----AG------GTTCCGTT-CTG---GCGA--TATTGCGCACAT----G--AATGAAAACAATCACATT-----ACAATAAAAGGGCG--AATCAAGG-----------ACTGTATTTTCC--GAGGTACAAGG-AAAATTTTTCCAAGCAGTATTGAAGAATCCATTAAAACAAAGAATGGAATAAGAGATGTGGCTGTGGTTGGTGTACCTGATAAGCGCCTGTACGAAGAAGTTTGCGTTTTTGTTATGTG-ACAGATCCGA--GGGC-ATTGCAATTTCCCCA
gi|5 : tTTGCG--TTTGTTATGTG-ACAGATCC-ACGGGGCCA-TGCAATTTCCCCAAAGGTTTTAAAAGAGTTTTG--CTTAGAACAGTTTGTGGGACACAATGCTATTGATGGACTTGGAGAAATGCCAACATTTTTCCTTCAATTCCATACCCTGCCGATGCTTGTCAATGGAAAGATCAACAGAAGGCAGCTGCGACTTGACGCTATTCAACAGCTGCAATTGGCAGACCAGATGTAAAGTCTACTCTGGATATCAAAT------------------------TA-----GCACC--TT-T-GTTTTAA-GAATTAGATGATATAAATGGA-AACGTAATCTTGATTTTTTTCTAACGACTTTTTTTTC--TCCTTGAAATATCttgcgtttgttatgtgacagatccacggggccatgcaatttccccaaaggttttaaaagagttttgcttagaacagtttgtgggacacaatgctattgatggacttggagaaatgccaacatttttccttcaattccataccctgccgatgcttgtcaatggaaagatcaacagaaggcagctgcgacttgacgctattcaacagctgcaattggcagaccagatgtaaagtctactctggatatcaaattagcacctttgttttaagaattagatgatataaatggaaacgtaatcttgatttttttctaacgacttttttttctccttgaaatatc
gi|6 : tgtggaagtgaaaatcattgatggagatggaaatgttttgagaaaaggagaaaatggggagctttgtgttcgaagaatatgtggttttgaaaaatacttcaagaacacaggctcacttgattaagtcctattgcctggaaagaggttccgttctggcgatattgcgcacatgaatgaaaacaatcacattacaataaaagggcgaatcaaggactgtattttccgaggtacaaggaaaatttttccaagcagtattgaagaatccattaaaacaaagaatggaataagagatgtggctgtggttggtgtacctgataagcgcctgtacgaagaagtttgcgtttttgttatgtgacagatccgagggcattgcaatttccccaGGTGTCACGTAGGAGCACGCCCATTCCCAGGCCTAGATCGTCAATATCATTAGCATGGATGACAGTAGAGAGGATTTTG--AGAAAAGGGTGAGAATGGGGAAAGCTTTCTGTTAAAATTGTTTGGTAAACGATACAGCAAGTTATTACTTGGTTTTTTGAACAAATATCTACGAAAGAACCACAGAAACTCATGATAACATAACGAGAGTACATCGGTTTGGACTGCCGATGGAAAAGATATGTATCGAGTATCGTTTCTGCATGCGACGTATTGCGCACATTCAGAGTAAT-AAAACATTCATATTTGTATATAAAGAAGGGGCGTAAATCAAAGGGTAATCGTGTAATATATTTCTCCAGAGGTACAAGGAAAAATAATCCC-AGTAGTATCGAGGACCTCATTATAACAATGAATGGGATAAAAAATGTGATTGTGGTTGGTGTCCCTGACAAGCGTTTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGAAAC-A--GAGC-A-TGAAATTTCCCAAACCGATGTAGAACAGTTTTG--TATGAAGATGTTCGTAGGGCATGATGCCATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTTCGATTCCACAGTCTGCCATTGCTTGTTAGTGGAAAAATCAACAAAAGACAGTTGAGAATTGATGCCATTCAACAGCTACAATTGGCTGATCACTTATAAAGCGAACT
gi|7 : AACA----T-TCATATAGTATGCCAAT-TAA-A-------GATT----C-AT-T---TTT-AAAATTCATTCTG-------GTGAATATTTTTTTT-----TTTATTTCAGAAGTCTATTTGTCGTGTCAGAATTTAGTTACCTCTATACTCCACG
gi|7 : GCAACAAATATAGCAGGTTATATCATCCGGAACGGAATTAAGAAGGGGGATACCGTTGCTCTGTTT-GGACCCAACA-CT---CTAGAATGGGTGATAGCAGAATTAGCAATAATCATGGCAGGGGG-A--GTTGTTCAAATGTCCTTCAACGTCACCGATGCCAGAGA--GGTTTTCGAAATAATCTCAATT-GTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaacaaatatagcaggttatatcatccggaacggaattaagaagggggataccgttgctctgtttggacccaacactctagaatgggtgatagcagaattagcaataatcatggcagggggagttgttcaaatgtccttcaacgtcaccgatgccagagaggttttcgaaataatctcaattgtt
gi|8 : aacattcatatagtatgccaattaaagattcatttttaaaattcattctggtgaatatttttttttttatttcagaagtctatttgtcgtgtcagaatttagttacctctatactccacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCGACTCGTCAATTGACCTAC-AAGGACATACCACTATGAAAATATGGAACGTGATCAAAGAAGAACAATGCACGTCAGCAGTATTA-T----TACCGTATTTTCTATCAGATCTGGTGACTCACAAAGAAAATTACAAAGATTCCTTCCAACCTGA-TGAAAT-A-T--TCACAGGTGGACAACTGGTTGGCAGACTCCACACGGAGGTCGTTGGTGTATTTACAAAAACTCTTACAGTCGCCTATGGAACGACCGAGGTATTTC---CCATA-TCAGAGC--TTACACCAATTG-CCATTGATGGTCAAATGCAAGTTGGTG--ACGTAGGAAAAC---CAATGGCCGGTGTGGA-AGTGAAGATCATTG--ATGGA-GA---TGGAGATG-TTTTG--AGAAAAGGA-GAAAACGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGGT
gi|9 : ATTACCTCTGCTCCATTAATTTGAAGTTGTACACCGTATTAAATTAACATATACCACTGAGCAGATGT-A-ATATT-----CTAAAATAACTTTTTTGTGAGT----TAATGTAAATTC-AA---TTGTTCTGGTAATTCA-----------TTTAAATGTCTATTTTAGAGTCTTATTCGTCATGTCAAACCTCAGTTACCTCTCTACTCCACTGATCGTTCC--ATATAAATACAATACAGTTACTCAAGTGTTCAGCGAAACTAA---CA--C-TCATTCCTTGATAAAGAATTGTCCATTTAGCCGATGATATTTAAACGA--AGGTTAA---AGGACTAAGCTCTGACTTGTCGT----TTCAGAC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): ACATTTGCTTTGCTATTAAACAGAGTCAGAGATGGAACTCATACTGATGAGGACATTAAGATTATTCATGGAAAAGT
Alignments
lowQualScore : 33333333 11 222 33333333 22222 1 33333333333333333 111 111 666666666666666666666 22222 111 111 1111 1 1 22222 11 11 11 111 222222222 8888888888888888888888888888888888888888888 222222222222 3333333333333 111 1111 2222222222 3333333333 11 111 111 3333333333333333 111 111111 111111 111 11111 11111 1111 222222222222 111 2222222 11111 111 33333333333 11 9999999999999999999999999999999 11 1 1 77777777777 2222222 1 1 11
lowQualScore : 1 1 55555555 1 88 555 33333333 55555 6 0 77777777777777777 3 2 777 8 444 1 111111111111111111111 00000 1 77 222 11 1 8 444 5555 1 0 0 0 7 55555 33 33 6 2 0 11 8 1 1 6 1 6 111 1 2 1 1 1 0 1 0 999 5 1 1 1 1 7 5 1 6 6 666666666 8888888888888888888888888888888888888888888 1 6 11 1 3 4 3 5 0 3 222222222222 1 66 1 1 1 2222222222222 000 555 5 1 11 2 1 0 1 5 1 1 1 1 77 2222 1 1 0 1 1 1 0000000000 0 0 0 1 1 1 1 1 0000000000 8 1 3 11 8 0 1 1 1 99 111 1 1 5 77 5 000 5 77 66 2 77 7777777777777777 000 0 666666 222222 6 99 111 1 66666 77 2 6 66666 4444 99 222222222222 6 111 99 1111111 1 0 66666 000 11111111111 99 6 1 1 7 3 1 99 1 7 77 5 22 8888 666 1 1 99 00 1 0 1 1 1 1 0 1 1 1 0 44 9999999999999999999999999999999 1 33 6 0 1 0 22222222222 0 3333333 5 5 1 88
lowQualScore : . . ........ . .. ... ........ ..... . . ................. . . ... . ... . ..................... ..... . .. ... .. . . ... .... . . . . . ..... .. .. . . . .. . . . . . . ... . . . . . . . . ... . . . . . . . . . . ......... ........................................... . . .. . . . . . . . ............ . .. . . . ............. ... ... . . .. . . . . . . . . . .. .... . . . . . . .......... . . . . . . . . .......... . . . .. . . . . . .. ... . . . .. . ... . .. .. . .. ................ ... . ...... ...... . .. ... . ..... .. . . ..... .... .. ............ . ... .. ....... . . ..... ... ........... .. . . . . . . .. . . .. . .. .... ... . . .. .. . . . . . . . . . . . .. ............................... . .. . . . . ........... . ....... . . . ..
lowQualScore : 0 0 55555555 0 00 777 55555555 00000 5 0 00000000000000000 2 5 555 0 000 0 888888888888888888888 00000 0 00 000 66 0 0 000 0000 0 8 0 0 0 00000 88 88 5 5 2 00 0 0 0 7 0 7 777 0 2 0 7 0 7 0 7 666 7 7 0 0 0 5 7 5 7 7 777777777 7777777777777777777777777777777777777777777 5 7 99 0 0 9 0 7 7 2 000000000000 0 88 0 7 0 6666666666666 111 111 7 0 66 2 0 4 0 7 0 0 0 0 66 1111 9 0 6 0 0 0 7777777777 7 7 3 5 0 4 4 0 0000000000 0 0 2 00 0 8 0 0 0 22 777 0 7 7 99 7 000 7 99 11 7 99 9999999999999999 000 7 444444 888888 7 22 777 0 77777 77 2 7 77777 2222 22 888888888888 7 777 22 2222222 0 3 77777 222 77777777777 22 7 0 0 2 7 0 33 0 8 99 7 77 3333 111 0 0 22 00 0 3 0 0 0 0 6 0 4 4 2 55 5555555555555555555555555555555 0 88 5 0 2 0 00000000000 7 0000000 0 0 0 55
consensus : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA--GAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCTG-------A-----------TTT-----TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TAA---CAGCA-TCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ANGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAACATCCTATGAT-GATCTCCCCGGAGTATTACAGNTGGAAGACGAAANTGACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAAC---GA-T--A---TGAT--ATTCCCCGG-GAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCG-CCNCCGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATNTT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT----A--AATGAAAACAATCATATT-----ATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AAT-CCATA--GATGNACC--TTGT-GTTTTTG-GAATTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
Reference ( family-177 ) : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA--GAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCTG-------A-----------TTT-----TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TAA---CAGCA-TCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ANGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAACATCCTATGAT-GATCTCCCCGGAGTATTACAGNTGGAAGACGAAANTGACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAAC---GA-T--A---TGAT--ATTCCCCGG-GAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCG-CCNCCGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATNTT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT----A--AATGAAAACAATCATATT-----ATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AAT-CCATA--GATGNACC--TTGT-GTTTTTG-GAATTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
gi|1 : ATTATATCTGCTCCATTACTTTGAAGTCGCACAC--------ATGA---TATATC---GAACA----TGC-ATGTA-----CCAAT-TAACA-------GACT----CAGTGT---TTT-AA---TCGGTCTG-------A-----------TTT-----TCTATTTTAGAATTGTGTTCGCCATGGCAGATTTCAGTTACCTCTGTACTCCACGGACCAAACC--TTACACCTATAAAACAATTACTCAGGTCTTCAACGAAA-AAAATACAGCGGTCAATTCCTGATCAATAAATTCTCATTTA-TAGA-GG-ATT-----GGACTGG--AACCCGACA--AAGCT-TGACTTGCTGTCAACTTCAGACGCAGGCAAGAAAGTTAGCTAGCTATCTCATTAGAAAAGGAGCGAAGAAGGGAGATAAGATTGCTCTCTCG-GGACCAAACA-CT---CTAGAATGGGTGATCACAGAATTAGCAATAATCACTGCGGGGGGTGTTGTTGTTCACTTGCCTTTCAGCAATGCCGATGCCAAAGA--CGTTTACGAAATAGCTTCAGTT-GCTGAATGTAAGGCATTTTTTATTGATCCCGGTAAACGA-GATGAATAT-TTAGA---------TATGATTTTACAACTTA--ATGCTTT-----------TA--TC-----------------GAGGACGAC-TCGAATGTTTCAGCTTTAATTTTCCTCAGACAGAGCGAGCATCTGAAATCTTATGAT-GATCTCTATGGAGTATTAAAGATGGAAGACGAAAGTGACGTAGAGTTTCCTACACTTTACCCAGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAACCTAAAATGATCCCTAAAACACATTTTCACGCCACCAAC---AA-T--C---TGTTCAACTCCTCAAAGAAAACTTACAATGATCGCCCATTTGCTTGGATTACAGGATCACCAATTCAAAGAGTGCATCAAGGGGAACCTAGAGTATTCTGCGACTCTTCAATTG-CGTTAGAAGGACACGACACTATGGAAATATGGAACGTGATCAGAGAAGAACAGTGCACGTCAGCTGTATTA-T----TACCATACTTTCTATCAGATCTGGTGTCTCACAAAGAAAATTACAAAGATTCCTTCAAACTTGA-TG--AT-G-TCATCACAGGTGGACAACTGATTGGCAGTCTCCACACGGAGGTTGTTGGCGTATTTACAAAAACTCTTACAGTCGAATATGGATCAACTGAGGAATTCT---CCATA-TCTCAGC--TTCCGCCTATTA-CTACAGCTGGTAAAATACATTCTGGTG--ACGTAGGAAAAC---CAAAAGCAGGCATAGA-AGTGAAGATCACTG--ATGGA-GA---CGGTAATG-TTTTG--AAAAAAGAA-GAGAATGGGGA--GCTTTGTATA----------------CGA---AGAA------TGTGTGGGTTT--CAG-AAATA-CTAC--AAGAAT---ACAGGCT-----TAAA-TGATGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCACAGAT----A--AATGAATACAATCATATC-----ATAATCAAAGGGCG--TATAAAAG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATTTTGCCAGGTAGTATCGAAAAAGTCATTATAACAATGCATGGTATAAAGAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTGTACGAGGAAGTTTGCG--TTTGTTACGTC-ACACAAAC-A--GGGC-T-TGAAATTTCCTCAACCGATGTAAAAGATTTTTG--CCTGGAAAACTTCATTAGGCAAGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCACTTTCAGAGTGTGCCGATGCATGCTAATGGAAAGATCAACAAAAGGAAGCTGAGAATTGATGCCATCCAACAGCTAAAACTGGCAAACCTGATGGAAGGCGAACTCTCGATATGAAATGCT-----TC-------AAT-ACATA--GATGAATC--TTATAGTTTTTG-GAATCAGCTGA-----------AATGT-GTTC--ATTTTTTT-TAA-AATTCCTTTATCTATTTTTAAGATATC
gi|10 : gtt--AAGCT-TAACTTGCCGTCAACTTCAGACGCAGGCAAGAAAGTTAGCGAGCTATCTCATCAAAAAAGGAATTAAGAAAGGAGATACAGTCGCTCTATTT-GGTCCGAACA-GT---CTAGAATGGGTGGTTGGAGAATTAGCGATAATCATGGCGGGTGGCATTGTAGTTCACTTGCCCTTCAGCAACACTAATGCCAGCGA--CGTTTACGATATCCTTTCAGTT-GCTGATTGCAAGGCTTTTTTGATTGACCCTGGTAAACAA-AATGAATAT-TCAGA---------TATGATTTTAAAACTTA--AGGCCCA-----------TA--TC-----------------GGAGAGTAT-AAGAATATTTCGGCTTTTGTAATACTCAGAAAGAACGAATTTCTAATAGCCTATGAT-GATCTCCCTGGc
gi|11 : AGA--TATTCACGGAATTATATCTGTTCGC-GAATGCTAAGTACTTTTCGTTGATCT---TAAAAGA-GGAGAATATCTTAAAATAGCTTTTTATGATTTCGCA--TTGT-AT--TTAAC---------TAATTC-----------------GTTGACAATATCAAA-----CGACCTAACTTT-----AGACAGAGCGAGCATTTAACATCCTACTATTAATTTCTTC--AGTAT--CAAAC--AAGA----ACTGTAGATGAATTTCCAGCAT-------CGAGAATAAAATAGGGATTTTTGCGGAGTCTG----------------TA---------CTAAAACG----TTCAGACGATCAAC---AA-T--A---TGA---ATTCTG-GG-GAAACCTTTTAGTGTTCCACTATTTGCTTGTGCGGCAGGA
gi|12 : gatgaGTGTACCTTGGGAAACCTATTGTATTTTGTGATTCATCGGTCG-CTACCAATGGACAAAACACAATGAACATTTGGAATGCAATCAAGGAAGAACAGTGCACATCGGCATTATTT-T----TACCTTATTGTCTCTCAGATCTGGTGGCTCATGGCGAAAATTACAAAGATTCATTTCAACTGGA-T---ATGG-TCATCACAACTGGTCAGCTGATTGATAATATCTATACGAAGGTCGTTGGTGTATTTACAAAGGCTCTTACAGTTG
gi|13 : tttctccATGAAATTGCAATTTTCACGACCTCTGGAAACACGGGAAACCCTAAAATGGTCCCTAAA-CACACTTTCAGTTCATCAAT---GAGTCAA---TGAC--ATCCCCCAG-GAAAAGTTACAACGATCGGCCATTTACTTGGGTGTTAGGATTTCCTATTCTAACAGTGTATCAAGGACAACCTAGAGTGTTCTGTGAGTCCTCAATTG-CCTTAGAAGG
gi|14 : TTACAGTTCGAAGAGAAAACCGACTTTGAATTTCCTACGCTCTACCCCGAGGATGAAATTGTAATTTTCATGACGTCTGGAAGCACAGGGAAGCCTAAAATGATTCCTAAAACACACT
gi|15 : GCAGCTTTT-T----TACCTTACTTTTTGTCAGATCTGGTGGCACAGGCAGAGAATTACAAAGATCCATTCAAGCTTGA-T---AT-GTTCACCACAACTGGCCAGTTGATTGACAAT
gi|16 : gTCATGTCAGAATTCAGCTACCTCTGTACTCCACGAACCA--CCAAATATACATACAAAACTATTACTCAAGTGTTTCACGAAA-TAA---CATCA-ACATTTCC
gi|18 : ACGGGAAAGCCTAAAATGGTCCCT-AAACACACTTTCAGAACATCAAT---GAGTCAA---TGAC--ATCCCCCAG-GAA
gi|19 : GAATATTTCGGCTTTTGTATTACTCAGAAAGAACGAATATCTAATAGCCTATGAT-GATCTCCCTGGAGT
gi|2 : ATATATCA--GTATA----T-T-ATATA-----C-AAT-TTATA-------CAATATACCAATGT---TCTGAA---TTAATC-G-------A-----------TTT-----TTAATTTCAGATTCCTGTTGGTCATGTCAGAACTCAGTTATCTATGTGTTCCACACACAGTTCC--CTATAAGTACAAAACAGTTATTCAAATATTCAACGAAA-TAA---CAACA-TTGTCTTCAGACAAAGAGATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCAGGGA--AAGCC-TGACTTGCCGTCAACTTCGGACACAAGCAACAAAGTTAGCAGGCTATCTAATCAGGAAGGGAATTAAGAAGGGAGACACAATCGCTCTATCG-GGGCCTAACA-CC---CTAGAATGGGTGGTAGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACGTGCCCTTTGGCACCACCGACGCCAGAGA--CGTTTATGAGATAGCTTCAATT-GCTGAGTGCAAGGCATTTTTAATAGATCCAGG-AAGAGACGATGAATAT-GTAGA---------CATGAGTTCGCAACTTATTACACTTATTAATCGACATTA--TCTTGGTAAAGACAGCACTGAGGAAGAG-TCGAATGACGTAGCTTTCATTTTTCTCAGAAACAGCGAACATCTATCTTCATATGAT-GACCTTCCTGGGATATTACAAC-GGAAA--GAAAGTGATGTTGAATTCCCAATCCTCTACCCCGAGGATAAAATTGTCATTTTCACGACGTCTGGAAGCACAGGAAAGCCAAAAATGATTCCTAAAACACACTTTCAGGCAGCCAAC---AA-T--ACAATGAT--GTTTGATGA-GAAATTTTACAGTGATCGACCATTTGCTTGGGCAGCCGGATCTCCCATTTTCACCGTGTACCGAGGGGTACCTGTAGTATTCTGCTACACATCCGTCG-CCACCGAGGGACATAACACAATGAAAATTTGGGAGATAATCAAAGAAGAACAGTGCACATCAGCATTATTC-T----TACCATACTTTCTTTTAGATCTGATGGCCCAGGAAGAAAACTACAAAGATTCTTTCAAACTTGACT---CT-G-TCCTCACAACCGGACAGCCTATTAACAATCACCACACGAAGATCGTTGACAAATTTACCAGAATTCTGAAATATGGATACGGATCAACCGAGACATATTGGGC--TT-TTTTA-C--TTTCGCCTATTAGCT-CTGATTTTGAAGTGGAAGGCGGTG--ATGTTGGGAAGC---CATTACCAGGCGTAGA-AGTGAAGGTCATTG--ATGGC-GA---AGGAAATG-TTTTA--AGGAAAGGG-GAGAATGGAGA--ACTTTGCATT----------------CGA---AACA------TATGTGGTTTT--GAG-GAGTA-CTAC--AAGAAT---AAAGACT-----TAAC-TGAAGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGGT-CTG---GTGA--CATTGCCTGTGT----A--AATAAAAACAATCATGTC-----GTAATAAAAGGTCG--GATCAAGG-----------ACTGTATTTCTC--GAGGTACAAGG-AAAATAATACCCAGTAGTATAGAAGAACTCATTGTAACATTGAATGGTATTAAAAGTGTGACTGTGGTTGGTGTACCTGACAAGCGTTTATACGAAGAAATTTGCG--CTTGCTACGTC-ACAGACCC-A--GAGC-A-GCAGATTGCCCCAAGCGATGTAGAACAGTTTTGTACCAAGAAA--TTCGTAGGACACGATGCTATTGACGGTCTTGGGTCACTGCCAAAATATTTTCTCCGATTCCATGTTTTGCCGACGCTTGGTAATGGCAAGATTGATAAAAGGCAGCTAAGAATTGATGCCATTCAGCAGCTGGGATTGGCTGATCAGATGTAAAGCTAACTGTTAAGATCAAATAC-------C-------ATT-CCTTAAGGA-GAACC--TTGT-GCATTTGAAAATTAGCTGA--------GGTAATGC-G--CTGA
gi|3 : ata-AG---TCAGTC-A-------A-----------TTC-----TCTTTTTCAGAATCGTGTTCATCATGTCAGAATTGAGTTATCTCTGTGTTCCACGGACAATTCC--TTACAATTACAAGACAGTTATTCAAGTCTTTAACGAGA-TAA---CAGAA-TCATTTCCGGAGAGAGAAATTCTCATTTA-TCGA-GGCGTT-----GA--TGG--AATCCGGAA--AAGCT-TAACTTGCCATCAACTTCTGACGCAGGCCACAAAGGTAGCAGGTTATCTCATCGGGAAAGGAATTAGGAAGGGGGATAGAATTGCTTTTTAT-GCACCCAACA-CC---CTAGAATGGGTGATCGCAGAATTAGGTATAATCATGGCGGGAGGTGTTGTTATTTACGTGGGCTTAGATATCACCGACGCAAGAGA--GGTATACGAGATAGTTTCAACT-GCTGAGTGCAAAGCCTTTTTGATGGGTCCGGGGAGAAAA-GATGAATAC-GCGGA---------TATGATATCACAACTTATCAAGC--A-----------CT--CC-----------------GAAAAAGAC-TCGAATCTTTCGATGTTAGATTTTCGCAGAATGAGCGAGCATCTGCCATTATATGAC-GACCTCCCCGGAATATTACAGCTAGATGCTG---CTGATGTGGAGCTCCCTACACTGTATCCTGAGGATGACGTTGTTGTTTTCACTACGTCTGGAAGTACAGGAAAGCCCAAACTGATCCCAAAGACACACTTTCAAGCAATCAACAATGG-T--A---TGAT--ATTCTCTGA-GAAGACTTACAATGATCGACCATTTACTTGGTTGGCCGGGTGTCTTATTTGCACAGTGTACCAAGGATGCGCTAGAATATTTTGCGATTCTTCATTCG-CCACCGAAGAACATAAAACCATGAAGATATGGGAAATAATCGAAGAAGAAAAGTGCACGTCTGCGCTTTTA-T----CACCTGACTATCTTTCATATCTGGTATCTCAAGGAGAAAATTACAAAAAAGCGTTCAAACTTGA-T---AC-GATCATCACGACTGGACAACTAGCTGACAATCGTCACACGAAGGTCGTTGGCGTATTTACGAGGAGTTTGAAAGTTGCATACGGATCTACGGAGGCAAGTA---GAATA-TCTGTAC--TTCCACCCATCA-CTATGGCGGGTGAAATGAGAGCTGGTG--ACGTGGGGATCC---CTATATCAGGTTTAGA-AGTCAAGGTCATTG--ATGAA-GA---TAAAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTATGTGTT----------------CGA---AGCA------TTTGTGGTTTC--GAT-AAATA-TTAC--AAGAAC---ACAGAGT-----TAAC-TAATCG-TGTCC-----TTT----TGCC--GGGAAGG----TG------GTTTCGTT-CAG---GCGA--CATTGGGCACAT----T--AATGAAGACAATCATATT-----ATAATAAAGGGGCG--GATCGCGG-----------ACTGCATTTCCC--GAGGCGCACGG-AAAATAATTCCCAGTAGCATTGAAGAAGTCATTCAAACAAAGAATGGTATTAAAGATGTCATTGTTCTCGGTGTACCTGACAAGAGTCTACACGAAGAAATTTGCG--TTTGTTACGTC-GCATATTC-A--GGTT-A-TGAAATTTCACCATTCGATGTAAAACAGTTTTG--CCTGAAATCCTTTGTTGGGGACGAAGCCGTCCATGATTTTGGAAAAATGCCATGGTATTTTCTCCGGTTCCAAAGTCTGCCAATGCTTGCTACTGGTAAGATCAACAAAAGACAGCTGCGAACCGACGCCATTCAACAGTTAGAAATGGCTGATCAGTTGTAAGGCGAACTTTTCTTATCAAAT-CTAAATATCCAAACGGAATGCCATA--AATGTATTGATTGT-TTCTTTG-AAATTAAC
gi|4 : gttcctcctgatgTCTAGGACCAAATATCTGTCCTGTAATGGTTAACCGCCGAATTAGCAATACTTATGACAGGTGATATTGTTGTTCACCTGCCATTCAGTAACACCGATGCCAGAGAAATATTTAAGAAATAGTTTCAATT-GCAGTGTGCAAGGCCTATTTGATAGACCCTGGCAAAGGA-GAGGAATAT-TTGGA---------TATGATTTTACAAATCA--ATGCCTA-----------TA--CA-----------------TAGGAAGAC-TCGAACGTTTCAGCGTTGGTTATTCTCAGAGAA----AGCA---AACA-------AT-TAACTGTCCG------------TG----ATGACAGTCACG--GAATAT--TACAGTCTACTCCGAGGATGAAATTGTGATTTTTACAACGTCTGAAAGCACGGGAAAGCCTAAAATGATCCCTAAAACTCATTTCTATGCAACCAACTATGA-T--A---TGAT--CTTCACTGG-GAAAACA-ACAATGATCGGCCATTTTCTTCGACAGTCGGATCTCCTATTCCAACAGTGTTTCGAGGGCAACCTAGAGTATTCTTTGATTCCTCCATTG-CCTCCGAAGAGCATAACACTTGGAAAATATGGGGCGTGATCAAAGACGAACAGTGCACATCAGCAACAGCAATCAAATACCTTATTTCCTTGAAGATCTGGTGGAACAAACAGATAATTACAAAGATTCACTCAAATATGA-G---GT-GATAGTCACAGGTGGACAACTGATAACCAATCTCGACACATAGGTCGTTGTTGTATTTACCAAGAATCTTACAATCACATACTGATTGGCTGAGGGAGGAT------TAGTTTCAGTATTTCCGCTTATTA-CTACTTTTGGTGAGCTAAAAGCTGGTG--ACGTAGGGAAAT---CAATACCAATCATAGA-AGTAAAGATCATCG--ATGAT-AT---TGGGAATG-TTTTGGAAAGAAACAT-GAGAAAGGGGA--GCTTTGTATA----------------CGA---GGCA------TATGTGGTTTT--G----------------GGAAC---AGACGCT-----TGAA-TGACGA-AATCC-----TTT----TGTC--TGGAATG----TC------GTTTCGTT-CTG---ACAA--TATTGTGTACAT----A--AATGAAGACAATCATATT-----ATGATAAAGGGTCG--TATCAAAG-----------ACTGTATTTCCA--GGGGTACATGA-AAAA-ATTGCCATGTAGT--------ACTCATC---ACAAAGAATGGTAT-AAAAATGCGATTGTGGTTGGTGTACTTGATAAACATCTCCACGAAGACATTTGCG--TTTGTTAT-TCAACAGACTC-T--GAGC-A-TGAAATTTCCCCAACCGATGTAAAAGAGTTATT--CCTGGAAAAGTTCGTTGGGCACGATGCAAATGGTGAACTTGAAGAAATGCCAAAGTATTTCCTTCTTTTCTTTAACCTTCCAATGCTTGTTAATGGGAAGATCAATAAAA
gi|5 : cGTGGA-AGTGAAAATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGA-GAAAATGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGGTTTT--GAA-AAATA-CTTC--AAGAAC---ACAGGCT-----CACT-TGATTA-AGTCC-----TAT----TGCC--TGGAAAG----AG------GTTCCGTT-CTG---GCGA--TATTGCGCACAT----G--AATGAAAACAATCACATT-----ACAATAAAAGGGCG--AATCAAGG-----------ACTGTATTTTCC--GAGGTACAAGG-AAAATTTTTCCAAGCAGTATTGAAGAATCCATTAAAACAAAGAATGGAATAAGAGATGTGGCTGTGGTTGGTGTACCTGATAAGCGCCTGTACGAAGAAGTTTGCGTTTTTGTTATGTG-ACAGATCCGA--GGGC-ATTGCAATTTCCCCA
gi|5 : tTTGCG--TTTGTTATGTG-ACAGATCC-ACGGGGCCA-TGCAATTTCCCCAAAGGTTTTAAAAGAGTTTTG--CTTAGAACAGTTTGTGGGACACAATGCTATTGATGGACTTGGAGAAATGCCAACATTTTTCCTTCAATTCCATACCCTGCCGATGCTTGTCAATGGAAAGATCAACAGAAGGCAGCTGCGACTTGACGCTATTCAACAGCTGCAATTGGCAGACCAGATGTAAAGTCTACTCTGGATATCAAAT------------------------TA-----GCACC--TT-T-GTTTTAA-GAATTAGATGATATAAATGGA-AACGTAATCTTGATTTTTTTCTAACGACTTTTTTTTC--TCCTTGAAATATCttgcgtttgttatgtgacagatccacggggccatgcaatttccccaaaggttttaaaagagttttgcttagaacagtttgtgggacacaatgctattgatggacttggagaaatgccaacatttttccttcaattccataccctgccgatgcttgtcaatggaaagatcaacagaaggcagctgcgacttgacgctattcaacagctgcaattggcagaccagatgtaaagtctactctggatatcaaattagcacctttgttttaagaattagatgatataaatggaaacgtaatcttgatttttttctaacgacttttttttctccttgaaatatc
gi|6 : tgtggaagtgaaaatcattgatggagatggaaatgttttgagaaaaggagaaaatggggagctttgtgttcgaagaatatgtggttttgaaaaatacttcaagaacacaggctcacttgattaagtcctattgcctggaaagaggttccgttctggcgatattgcgcacatgaatgaaaacaatcacattacaataaaagggcgaatcaaggactgtattttccgaggtacaaggaaaatttttccaagcagtattgaagaatccattaaaacaaagaatggaataagagatgtggctgtggttggtgtacctgataagcgcctgtacgaagaagtttgcgtttttgttatgtgacagatccgagggcattgcaatttccccaGGTGTCACGTAGGAGCACGCCCATTCCCAGGCCTAGATCGTCAATATCATTAGCATGGATGACAGTAGAGAGGATTTTG--AGAAAAGGGTGAGAATGGGGAAAGCTTTCTGTTAAAATTGTTTGGTAAACGATACAGCAAGTTATTACTTGGTTTTTTGAACAAATATCTACGAAAGAACCACAGAAACTCATGATAACATAACGAGAGTACATCGGTTTGGACTGCCGATGGAAAAGATATGTATCGAGTATCGTTTCTGCATGCGACGTATTGCGCACATTCAGAGTAAT-AAAACATTCATATTTGTATATAAAGAAGGGGCGTAAATCAAAGGGTAATCGTGTAATATATTTCTCCAGAGGTACAAGGAAAAATAATCCC-AGTAGTATCGAGGACCTCATTATAACAATGAATGGGATAAAAAATGTGATTGTGGTTGGTGTCCCTGACAAGCGTTTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGAAAC-A--GAGC-A-TGAAATTTCCCAAACCGATGTAGAACAGTTTTG--TATGAAGATGTTCGTAGGGCATGATGCCATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTTCGATTCCACAGTCTGCCATTGCTTGTTAGTGGAAAAATCAACAAAAGACAGTTGAGAATTGATGCCATTCAACAGCTACAATTGGCTGATCACTTATAAAGCGAACT
gi|7 : AACA----T-TCATATAGTATGCCAAT-TAA-A-------GATT----C-AT-T---TTT-AAAATTCATTCTG-------GTGAATATTTTTTTT-----TTTATTTCAGAAGTCTATTTGTCGTGTCAGAATTTAGTTACCTCTATACTCCACG
gi|7 : GCAACAAATATAGCAGGTTATATCATCCGGAACGGAATTAAGAAGGGGGATACCGTTGCTCTGTTT-GGACCCAACA-CT---CTAGAATGGGTGATAGCAGAATTAGCAATAATCATGGCAGGGGG-A--GTTGTTCAAATGTCCTTCAACGTCACCGATGCCAGAGA--GGTTTTCGAAATAATCTCAATT-GTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaacaaatatagcaggttatatcatccggaacggaattaagaagggggataccgttgctctgtttggacccaacactctagaatgggtgatagcagaattagcaataatcatggcagggggagttgttcaaatgtccttcaacgtcaccgatgccagagaggttttcgaaataatctcaattgtt
gi|8 : aacattcatatagtatgccaattaaagattcatttttaaaattcattctggtgaatatttttttttttatttcagaagtctatttgtcgtgtcagaatttagttacctctatactccacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCGACTCGTCAATTGACCTAC-AAGGACATACCACTATGAAAATATGGAACGTGATCAAAGAAGAACAATGCACGTCAGCAGTATTA-T----TACCGTATTTTCTATCAGATCTGGTGACTCACAAAGAAAATTACAAAGATTCCTTCCAACCTGA-TGAAAT-A-T--TCACAGGTGGACAACTGGTTGGCAGACTCCACACGGAGGTCGTTGGTGTATTTACAAAAACTCTTACAGTCGCCTATGGAACGACCGAGGTATTTC---CCATA-TCAGAGC--TTACACCAATTG-CCATTGATGGTCAAATGCAAGTTGGTG--ACGTAGGAAAAC---CAATGGCCGGTGTGGA-AGTGAAGATCATTG--ATGGA-GA---TGGAGATG-TTTTG--AGAAAAGGA-GAAAACGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGGT
gi|9 : ATTACCTCTGCTCCATTAATTTGAAGTTGTACACCGTATTAAATTAACATATACCACTGAGCAGATGT-A-ATATT-----CTAAAATAACTTTTTTGTGAGT----TAATGTAAATTC-AA---TTGTTCTGGTAATTCA-----------TTTAAATGTCTATTTTAGAGTCTTATTCGTCATGTCAAACCTCAGTTACCTCTCTACTCCACTGATCGTTCC--ATATAAATACAATACAGTTACTCAAGTGTTCAGCGAAACTAA---CA-C--TCATTCCTTGATAAAGAATTGTCCATTTAGCCGATGATATTTAAACGA--AGGTTAA---AGGACTAAGCTCTGACTTGTCGT----TTCAGAC
blockSeqs : C A CGTATTAA T AC ACT GATGTA GTATG C A CTTTTTTGTGAGT A G AAA G AAT A TGGTGAATATTTTT AAATG C TT AAA CA G C . TCA A G T T TAAAC . TT C A CT C T A A G T GTC T G T C T A AAT C T T G T T T C C C ATAGCTTTT TTACACTTATTAATCGACATTATCTTGGTAAAGACAGCACT G A TA T A G C T T TTCGAAGAGAAA C AT C G G GAGTCAA C CCC . A TA T A A A A A T T AA CAAA T C T G A TGAAATA A C A C C TATTGGGC G T A AT G T A G TC GCC C G T GC T CAG A GA GT T AA AAAATTGTTTGGTAAA TAC AGTTAT TTGAAC T GA CAC A CATGA CA A G ATCGG GGAC GA GATATGTATCGA T CAT CG TCAGAGT A TGTAT TAA GGTAATCGTGT CA A A A C A C GT T T TT A CC ACG AT G C TA CC A A T T C G T A TA CTAAATATCCAAACGGAATGCCATAAAT A GA G . A A TATAAATGGA TAATCTT C C T .
blockSeqs : A TTC . T . TACAATATAC A G . . . G TGGTAATTCA . G TT C AG A . . ACA G . . C . . . T C . . T A . T . . A G G T G C C . T A C T A T A . . . TATTTAACTAATTC C . TA A A T C . T CTAGATGCTG C TT C A C GAGTCAA C CCC . A TC A C C . T A G G T . T G G C A TATGG C T T G C AGTAGAA . G G . . G C A . . T T . . . . . . G C . . . . GAG . . . C . C T . . . . TG . . . A G . G . . . A T C T G CA A T . . TT GA CA T C . AG T G A G T G T T TC ACCATTCCTTAAGGA T . G . C . GGT CGCT
blockSeqs : TT . . . AGATT . . . . . T GA . C TT T AT C . . GAA T . . T . . . . . . . G T . C . . C T A T G T T . T A A A G G A . . . AGGCCCATATC A . TG T T G C . T CGGAAAGAA G TT G A C AATACAA T GAT . C GC G G A . A C A T T . A T G A T TATGT G G G T G TTTCCCA . C G . . T T A . . C A . . . . . . G A . . . . GAT . . . G . C C . . . . TG . . . T G . G . . . T G A T C AA A A . . CT A A C G . AG T T T A G C A A GG TA C . . . T .
blockSeqs : . . T AA . T . A AA G . . C . . A G . A . . C A T T C A C . A C G G T C A . . . TCAAGCACTCC A . TC C T T A . . TGATGAC C TG C C A AATGGTA T TCT . C CA A T T . A T C C C . T T A G G CTCTG C A G C T GGAT . G . . . T A C . . C G . . . . . . T T . . . . GAA . . . C . A T . . . . TC . . . A G . T . . . T T A C T AT A A . . TC A A A G . TG G A T C A C T T
blockSeqs : . C . . A A G . A T G . T C G A . . G . . . ATGCCTATACA A . CG A T T A . . ACAAGA G . . T A TATGATA T ACT . C G C C . T T C A A . T T A C A TACGA A C . . G C . . . . . . A T . . . . G . . . G . T C . . . . AG . . . G . . A . . . A C . . C . T . . . TC T A C C . . A A C G A
blockSeqs : G . . . G . . . . G A AATA . TG . G . T G A . G A C A C GGTGA G . . . . . . A C . . . . . . AA A A
blockSeqCons : GAA****************** *** NCA* CGANAGAA**** GATNCAA****** T**
originalCons : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA--GAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCTG-------A-----------TTT-----TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TAA---CAGCA-TCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ANGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAACATCCTATGAT-GATCTCCCCGGAGTATTACAGNTGGAAGACGAAANTGACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAAC---GA-T--A---TGAT--ATTCCCCGG-GAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCG-CCNCCGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATNTT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT----A--AATGAAAACAATCATATT-----ATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AAT-CCATA--GATGNACC--TTGT-GTTTTTG-GAATTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
finalCons : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA--GAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCGAA------------------TTT-----TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TAA---CANCA-TCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ANGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAACATCCTATGAT-GATCTCCCCGGAGTATTACAGCGANAGAA----ANTGACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAACGATNCAA------TGAT--ATTCCCCGG-GAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCG-CCNCCGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATNTT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT----A--AATGAAAACAATCATATT-----ATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AAT-CCATA--GATGNACC--TTGT-GTTTTTG-GAATTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): ACATTTGCTTTGCTATTAAACAGAGTCAGAGATGGAACTCATACTGATGAGGACATTAAGATTATTCATGGAAAAGT
Alignments
lowQualScore : 33333333333333 222 33333333 22222 1 33333333333333333 111 111 777777777777777777777777777 111 111 111 1 1 22222 11 11 11 111 222222222 8888888888888888888888888888888888888888888 444444444444 111 1111 2222222222 3333333333 11 111 111 3333333333333333 111 111111 111111 111 11111 11111 1111 222222222222 111 2222222 11111 111 33333333333 11 9999999999999999999999999999999 11 1 1 77777777777 2222222 1 1 11
lowQualScore : 1 1 99999999999999 555 33333333 55555 6 0 77777777777777777 3 2 777 8 444 1 222222222222222222222222222 1 77 222 11 1 8 444 444 1 0 0 0 7 55555 33 33 6 2 0 11 8 1 1 6 1 6 111 1 2 1 1 1 0 1 0 999 5 1 1 1 1 7 5 1 6 6 666666666 8888888888888888888888888888888888888888888 1 6 11 1 3 5 5 2 33 2 999999999999 1 3 6 66 2 1 1 3 1 2 333 9 66 1 11 2 1 0 1 5 1 1 1 1 77 2222 1 1 0 1 1 1 0000000000 0 0 0 1 1 1 1 1 0000000000 8 1 3 11 8 0 1 1 1 99 111 1 1 5 77 5 000 5 77 66 2 77 7777777777777777 000 0 666666 222222 6 99 111 1 66666 77 2 6 66666 4444 99 222222222222 6 111 99 1111111 1 0 66666 000 11111111111 99 6 1 1 7 3 1 99 1 7 77 5 22 8888 666 1 1 99 00 1 0 1 1 1 1 0 1 1 1 0 44 9999999999999999999999999999999 1 33 6 0 1 0 22222222222 0 3333333 5 5 1 88
lowQualScore : . . .............. ... ........ ..... . . ................. . . ... . ... . ........................... . .. ... .. . . ... ... . . . . . ..... .. .. . . . .. . . . . . . ... . . . . . . . . ... . . . . . . . . . . ......... ........................................... . . .. . . . . . .. . ............ . . . .. . . . . . . ... . .. . .. . . . . . . . . . .. .... . . . . . . .......... . . . . . . . . .......... . . . .. . . . . . .. ... . . . .. . ... . .. .. . .. ................ ... . ...... ...... . .. ... . ..... .. . . ..... .... .. ............ . ... .. ....... . . ..... ... ........... .. . . . . . . .. . . .. . .. .... ... . . .. .. . . . . . . . . . . . .. ............................... . .. . . . . ........... . ....... . . . ..
lowQualScore : 0 0 55555555555555 777 55555555 00000 5 0 00000000000000000 2 5 555 0 000 0 888888888888888888888888888 0 00 000 66 0 0 000 000 0 8 0 0 0 00000 88 88 5 5 2 00 0 0 0 7 0 7 777 0 2 0 7 0 7 0 7 666 7 7 0 0 0 5 7 5 7 7 777777777 7777777777777777777777777777777777777777777 5 7 99 0 0 7 7 3 44 5 555555555555 5 3 7 88 5 0 7 2 0 7 666 3 11 0 66 2 0 4 0 7 0 0 0 0 66 1111 9 0 6 0 0 0 7777777777 7 7 3 5 0 4 4 0 0000000000 0 0 2 00 0 8 0 0 0 22 777 0 7 7 99 7 000 7 99 11 7 99 9999999999999999 000 7 444444 888888 7 22 777 0 77777 77 2 7 77777 2222 22 888888888888 7 777 22 2222222 0 3 77777 222 77777777777 22 7 0 0 2 7 0 33 0 8 99 7 77 3333 111 0 0 22 00 0 3 0 0 0 0 6 0 4 4 2 55 5555555555555555555555555555555 0 88 5 0 2 0 00000000000 7 0000000 0 0 0 55
consensus : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA--GAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTCTG--G-AA-------TTT---------TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TA---ACANC-ATCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ANGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAAC-ATCCTATGA-TGATCTCCCCGGAGTATTACAG--CG-AA-A---GAAANT-GACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAACGATNCGATGATATTCCCC-GGGAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCG-CCNCCGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATNTT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT--A----AATGAAAACAATCATAT-----TATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AAT-CCATA--GATGNACC--TTGT-GTTTTTGGAA-TTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
Reference ( family-177 ) : NNNATTACNTCTGCTCCATTANTTTGAAGTCGCACACCGTATTAAATNAACATATATCA--GAACA----T-T-ATATA-----CCAAT-TAACA-------GANT----CAATGT---TTT-AA---TCGNTC----G-AA-------TTT---------TCTATTTCAGAATCNTGTTCGTCATGTCAGAATTCAGTTACCTCTGTACTCCACGGACCGTTCC--NTATAANTACAAAACAGTTACTCAAGTNTTCAACGAAA-TA---ACANC-ATCATTTCCNGATAAAGAAATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCCGGGA--AAGCT-TGACTTGCCGTCAACTTCAGACGCAGGCAACAAAGTTAGCAGGCTATCTCATCAGGAAAGGAATTAAGAAGGGAGATACAATCGCTCTNTCT-GGACCNAACA-CT---CTAGAATGGGTGATCGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACNTGCCCTTCGGCANCACCGACGCCAGAGA--CGTTTACGAAATAGTTTCAGTT-GCTGAGTGCAAGGCNTTTTTGATNGATCCNGGTAAAAGA-GATGAATAT-TTAGA---------TATGATTTCACAACTTAT-ANGCTTA-----------TA--TC-----------------GAGGAAGAC-TCGAATGTTTCGGCTTTNGTTTTNCTCAGAAAGAGCGAGCATCTAAC-ATCCTATGA-TGATCTCCCCGGAGTATTACAG--CG-AN-A---GAAANT-GACGTTGAATTTCCTACACTCTACCCCGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAGCCTAAAATGATCCCTAAAACACACTTTCAGGCNACCAACGATNCAATGATATTCCCC-GGGAAAACTTACAATGATCGACCATTTGCTTGGGCGGCNGGATCTCCTATTCNAACAGTGTACCGAGGGNAACCTAGAGTATTCTGCGACTCNTCAATCG-CCNCCGAAGGACATAACACNATGAAAATATGGGACGTGATCAAAGAAGAACAGTGCACGTCAGCANTATTA-T----TACCTTACTTTCTNTCAGATCTGGTGGCTCANGNAGAAAATTACAAAGATTCNTTCAAACTTGA-T---AT-G-TCATCACAGCTGGACAGCTGATTGACAATCTCCACACGAAGGTCGTTGGCGTATTTACAAAGACTCTTACAGTCGCATACGGATCGACCGAGGNATNTT---CCATA-TCTNAGC--TTCCGCCTATTA-CTACTGNTGGTGAAATGNAAGCTGGTG--ACGTAGGGAAAC---CAATACCAGGCGTAGA-AGTGAAGATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTTTGTGTT----------------CGA---AGCA------TATGTGGTTTT--GAG-AAATA-CTAC--AAGAAC---ANAGGCT-----TAAC-TGACGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCGCACAT--A----AATGAAAACAATCATAT-----TATAATAAAGGGGCG--NATCAAGG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATANTNCCAAGTAGTATCGAAGAACTCATTATAACAANGAATGGTATAAAAAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGANCC-A--GGGC-A-TGAAATTTCCCCAACCGATGTAAAANAGTTTTG--CCTGGAAAAGTTCGTNGGGCACGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCGNTTCCANAGTCTGCCGATGCTTGTTAATGGNAAGATCAACAAAAGGCAGCTGAGAATTGACGCCATTCAACAGCTANAATTGGCTGATCAGATGTAAAGCGAACTCTCGATATCAAATGCT-----TC-------AAT-CCATA--GATGNACC--TTGT-GTTTTTGGAA-TTAGCTGA--------GG-AACGC-GTCCTGATTTTTTTCTAACGACTCCTTTNTCTATCCTTGAGATATC
gi|1 : ATTATATCTGCTCCATTACTTTGAAGTCGCACAC--------ATG---ATATATC---GAACA----TGC-ATGTA-----CCAAT-TAACA-------GACT----CAGTGT---TTT-AA---TCGGTC----T-GA-------TTT---------TCTATTTTAGAATTGTGTTCGCCATGGCAGATTTCAGTTACCTCTGTACTCCACGGACCAAACC--TTACACCTATAAAACAATTACTCAGGTCTTCAACGAAA-AAAATACAGCGGTCAATTCCTGATCAATAAATTCTCATTTA-TAGA-GG-ATT-----GGACTGG--AACCCGACA--AAGCT-TGACTTGCTGTCAACTTCAGACGCAGGCAAGAAAGTTAGCTAGCTATCTCATTAGAAAAGGAGCGAAGAAGGGAGATAAGATTGCTCTCTCG-GGACCAAACA-CT---CTAGAATGGGTGATCACAGAATTAGCAATAATCACTGCGGGGGGTGTTGTTGTTCACTTGCCTTTCAGCAATGCCGATGCCAAAGA--CGTTTACGAAATAGCTTCAGTT-GCTGAATGTAAGGCATTTTTTATTGATCCCGGTAAACGA-GATGAATAT-TTAGA---------TATGATTTTACAACTTA--ATGCTTT-----------TA--TC-----------------GAGGACGAC-TCGAATGTTTCAGCTTTAATTTTCCTCAGACAGAGCGAGCATCTGAA-ATCTTATGA-TGATCTCTATGGAGTATTAAAGA-TG-GA-AGACGAAAGT-GACGTAGAGTTTCCTACACTTTACCCAGAGGATGAAATTGTGATTTTCACGACGTCTGGAAGCACGGGAAAACCTAAAATGATCCCTAAAACACATTTTCACGCCACCAACAATCTGTTCA-ACTCCTCAAAGAAAACTTACAATGATCGCCCATTTGCTTGGATTACAGGATCACCAATTCAAAGAGTGCATCAAGGGGAACCTAGAGTATTCTGCGACTCTTCAATTG-CGTTAGAAGGACACGACACTATGGAAATATGGAACGTGATCAGAGAAGAACAGTGCACGTCAGCTGTATTA-T----TACCATACTTTCTATCAGATCTGGTGTCTCACAAAGAAAATTACAAAGATTCCTTCAAACTTGA-TG--AT-G-TCATCACAGGTGGACAACTGATTGGCAGTCTCCACACGGAGGTTGTTGGCGTATTTACAAAAACTCTTACAGTCGAATATGGATCAACTGAGGAATTCT---CCATA-TCTCAGC--TTCCGCCTATTA-CTACAGCTGGTAAAATACATTCTGGTG--ACGTAGGAAAAC---CAAAAGCAGGCATAGA-AGTGAAGATCACTG--ATGGA-GA---CGGTAATG-TTTTG--AAAAAAGAA-GAGAATGGGGA--GCTTTGTATA----------------CGA---AGAA------TGTGTGGGTTT--CAG-AAATA-CTAC--AAGAAT---ACAGGCT-----TAAA-TGATGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGTT-CTG---GCGA--TATTGCACAGAT--A----AATGAATACAATCATAT-----CATAATCAAAGGGCG--TATAAAAG-----------ACTGTATTTCCC--GAGGTACAAGG-AAAATTTTGCCAGGTAGTATCGAAAAAGTCATTATAACAATGCATGGTATAAAGAATGTGATTGTGGTTGGTGTACCTGACAAGCGTCTGTACGAGGAAGTTTGCG--TTTGTTACGTC-ACACAAAC-A--GGGC-T-TGAAATTTCCTCAACCGATGTAAAAGATTTTTG--CCTGGAAAACTTCATTAGGCAAGATGCTATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTCCACTTTCAGAGTGTGCCGATGCATGCTAATGGAAAGATCAACAAAAGGAAGCTGAGAATTGATGCCATCCAACAGCTAAAACTGGCAAACCTGATGGAAGGCGAACTCTCGATATGAAATGCT-----TC-------AAT-ACATA--GATGAATC--TTATAGTTTTTGGAA-TCAGCTGA-----------AATGT-GTTC--ATTTTTTT-TAA-AATTCCTTTATCTATTTTTAAGATATC
gi|10 : gtt--AAGCT-TAACTTGCCGTCAACTTCAGACGCAGGCAAGAAAGTTAGCGAGCTATCTCATCAAAAAAGGAATTAAGAAAGGAGATACAGTCGCTCTATTT-GGTCCGAACA-GT---CTAGAATGGGTGGTTGGAGAATTAGCGATAATCATGGCGGGTGGCATTGTAGTTCACTTGCCCTTCAGCAACACTAATGCCAGCGA--CGTTTACGATATCCTTTCAGTT-GCTGATTGCAAGGCTTTTTTGATTGACCCTGGTAAACAA-AATGAATAT-TCAGA---------TATGATTTTAAAACTTA--AGGCCCA-----------TA--TC-----------------GGAGAGTAT-AAGAATATTTCGGCTTTTGTAATACTCAGAAAGAACGAATTTCTAAT-AGCCTATGA-TGATCTCCCTGGc
gi|11 : AGA--TATTCACGGAATTATATCTGTTCGC-GAATGCTAAGTACTTTTCGTTGATCT---TAAAAGA-GGAGAATATCTTAAAATAGCTTTTTATGATTTCGCA--TTGT-AT--TTAAC---------TAATTC-----------------GTTGACAATATCAAA-----CGACCTAACTTT-----AGACAGAGCGAGCATTTAAC-ATCCTACTATTAATTTCTTC--AGTATCA------A-AC-A---AGAACT-GTAGATGAATTTCCAGCA-------TCGAGAATAAAATAGGGATTTTTGCGGAGTCTG----------------TA---------CTAAAACG----TTCAGACGATCAACAAT---ATGA-ATT-CTG-GGGAAACCTTTTAGTGTTCCACTATTTGCTTGTGCGGCAGGA
gi|12 : gatgaGTGTACCTTGGGAAACCTATTGTATTTTGTGATTCATCGGTCG-CTACCAATGGACAAAACACAATGAACATTTGGAATGCAATCAAGGAAGAACAGTGCACATCGGCATTATTT-T----TACCTTATTGTCTCTCAGATCTGGTGGCTCATGGCGAAAATTACAAAGATTCATTTCAACTGGA-T---ATGG-TCATCACAACTGGTCAGCTGATTGATAATATCTATACGAAGGTCGTTGGTGTATTTACAAAGGCTCTTACAGTTG
gi|13 : tttctccATGAAATTGCAATTTTCACGACCTCTGGAAACACGGGAAACCCTAAAATGGTCCCTAAA-CACACTTTCAGTTCATCAATGAGTCAATGACATCCCCC-AGGAAAAGTTACAACGATCGGCCATTTACTTGGGTGTTAGGATTTCCTATTCTAACAGTGTATCAAGGACAACCTAGAGTGTTCTGTGAGTCCTCAATTG-CCTTAGAAGG
gi|14 : TTACAGTTCG-AAGA---GAAAACCGACTTTGAATTTCCTACGCTCTACCCCGAGGATGAAATTGTAATTTTCATGACGTCTGGAAGCACAGGGAAGCCTAAAATGATTCCTAAAACACACT
gi|15 : GCAGCTTTT-T----TACCTTACTTTTTGTCAGATCTGGTGGCACAGGCAGAGAATTACAAAGATCCATTCAAGCTTGA-T---AT-GTTCACCACAACTGGCCAGTTGATTGACAAT
gi|16 : gTCATGTCAGAATTCAGCTACCTCTGTACTCCACGAACCA--CCAAATATACATACAAAACTATTACTCAAGTGTTTCACGAAA-TA---ACATC-AACATTTCC
gi|18 : ACGGGAAAGCCTAAAATGGTCCCTAAA-CACACTTTCAGAACATCAATGAGTCAATGACATCCCCC-AGGAA
gi|19 : GAATATTTCGGCTTTTGTATTACTCAGAAAGAACGAATATCTAAT-AGCCTATGA-TGATCTCCCTGGAGT
gi|2 : ATATATCA--GTATA----T-T-ATATA-----C-AAT-TTATA-------CAATATACCAATGT---TCTGAA---TTAATC----G-A--------TTT---------TTAATTTCAGATTCCTGTTGGTCATGTCAGAACTCAGTTATCTATGTGTTCCACACACAGTTCC--CTATAAGTACAAAACAGTTATTCAAATATTCAACGAAA-TA---ACAAC-ATTGTCTTCAGACAAAGAGATTCTCATTTA-TCGA-GGTATT-----GA--TGG--AACCAGGGA--AAGCC-TGACTTGCCGTCAACTTCGGACACAAGCAACAAAGTTAGCAGGCTATCTAATCAGGAAGGGAATTAAGAAGGGAGACACAATCGCTCTATCG-GGGCCTAACA-CC---CTAGAATGGGTGGTAGCAGAATTAGCGATAATCATGGCGGGGGGTATTGTTGTTCACGTGCCCTTTGGCACCACCGACGCCAGAGA--CGTTTATGAGATAGCTTCAATT-GCTGAGTGCAAGGCATTTTTAATAGATCCAGG-AAGAGACGATGAATAT-GTAGA---------CATGAGTTCGCAACTTATTACACTTATTAATCGACATTA--TCTTGGTAAAGACAGCACTGAGGAAGAG-TCGAATGACGTAGCTTTCATTTTTCTCAGAAACAGCGAACATCTATC-TTCATATGA-TGACCTTCCTGGGATATTACAA--CGGAA-A---GAAAGT-GATGTTGAATTCCCAATCCTCTACCCCGAGGATAAAATTGTCATTTTCACGACGTCTGGAAGCACAGGAAAGCCAAAAATGATTCCTAAAACACACTTTCAGGCAGCCAACAATACAATGATGTTTGAT-GAGAAATTTTACAGTGATCGACCATTTGCTTGGGCAGCCGGATCTCCCATTTTCACCGTGTACCGAGGGGTACCTGTAGTATTCTGCTACACATCCGTCG-CCACCGAGGGACATAACACAATGAAAATTTGGGAGATAATCAAAGAAGAACAGTGCACATCAGCATTATTC-T----TACCATACTTTCTTTTAGATCTGATGGCCCAGGAAGAAAACTACAAAGATTCTTTCAAACTTGACT---CT-G-TCCTCACAACCGGACAGCCTATTAACAATCACCACACGAAGATCGTTGACAAATTTACCAGAATTCTGAAATATGGATACGGATCAACCGAGACATATTGGGC--TT-TTTTA-C--TTTCGCCTATTAGCT-CTGATTTTGAAGTGGAAGGCGGTG--ATGTTGGGAAGC---CATTACCAGGCGTAGA-AGTGAAGGTCATTG--ATGGC-GA---AGGAAATG-TTTTA--AGGAAAGGG-GAGAATGGAGA--ACTTTGCATT----------------CGA---AACA------TATGTGGTTTT--GAG-GAGTA-CTAC--AAGAAT---AAAGACT-----TAAC-TGAAGA-AGTCC-----TTT----TGCC--TGGAAAG----TG------GTTTCGGT-CTG---GTGA--CATTGCCTGTGT--A----AATAAAAACAATCATGT-----CGTAATAAAAGGTCG--GATCAAGG-----------ACTGTATTTCTC--GAGGTACAAGG-AAAATAATACCCAGTAGTATAGAAGAACTCATTGTAACATTGAATGGTATTAAAAGTGTGACTGTGGTTGGTGTACCTGACAAGCGTTTATACGAAGAAATTTGCG--CTTGCTACGTC-ACAGACCC-A--GAGC-A-GCAGATTGCCCCAAGCGATGTAGAACAGTTTTGTACCAAGAAA--TTCGTAGGACACGATGCTATTGACGGTCTTGGGTCACTGCCAAAATATTTTCTCCGATTCCATGTTTTGCCGACGCTTGGTAATGGCAAGATTGATAAAAGGCAGCTAAGAATTGATGCCATTCAGCAGCTGGGATTGGCTGATCAGATGTAAAGCTAACTGTTAAGATCAAATAC-------C-------ATT-CCTTAAGGA-GAACC--TTGT-GCATTTGAAAATTAGCTGA--------GGTAATGC-G--CTGA
gi|3 : ata-AG---TCAGTC------AA-------TTC---------TCTTTTTCAGAATCGTGTTCATCATGTCAGAATTGAGTTATCTCTGTGTTCCACGGACAATTCC--TTACAATTACAAGACAGTTATTCAAGTCTTTAACGAGA-TA---ACAGA-ATCATTTCCGGAGAGAGAAATTCTCATTTA-TCGA-GGCGTT-----GA--TGG--AATCCGGAA--AAGCT-TAACTTGCCATCAACTTCTGACGCAGGCCACAAAGGTAGCAGGTTATCTCATCGGGAAAGGAATTAGGAAGGGGGATAGAATTGCTTTTTAT-GCACCCAACA-CC---CTAGAATGGGTGATCGCAGAATTAGGTATAATCATGGCGGGAGGTGTTGTTATTTACGTGGGCTTAGATATCACCGACGCAAGAGA--GGTATACGAGATAGTTTCAACT-GCTGAGTGCAAAGCCTTTTTGATGGGTCCGGGGAGAAAA-GATGAATAC-GCGGA---------TATGATATCACAACTTATCAAGC--A-----------CT--CC-----------------GAAAAAGAC-TCGAATCTTTCGATGTTAGATTTTCGCAGAATGAGCGAGCATCTGCC-ATTATATGA-CGACCTCCCCGGAATATTACAG--CT-AG-AT--GCTGCT-GATGTGGAGCTCCCTACACTGTATCCTGAGGATGACGTTGTTGTTTTCACTACGTCTGGAAGTACAGGAAAGCCCAAACTGATCCCAAAGACACACTTTCAAGCAATCAACAATGGTATGATATTCTCT-GAGAAGACTTACAATGATCGACCATTTACTTGGTTGGCCGGGTGTCTTATTTGCACAGTGTACCAAGGATGCGCTAGAATATTTTGCGATTCTTCATTCG-CCACCGAAGAACATAAAACCATGAAGATATGGGAAATAATCGAAGAAGAAAAGTGCACGTCTGCGCTTTTA-T----CACCTGACTATCTTTCATATCTGGTATCTCAAGGAGAAAATTACAAAAAAGCGTTCAAACTTGA-T---AC-GATCATCACGACTGGACAACTAGCTGACAATCGTCACACGAAGGTCGTTGGCGTATTTACGAGGAGTTTGAAAGTTGCATACGGATCTACGGAGGCAAGTA---GAATA-TCTGTAC--TTCCACCCATCA-CTATGGCGGGTGAAATGAGAGCTGGTG--ACGTGGGGATCC---CTATATCAGGTTTAGA-AGTCAAGGTCATTG--ATGAA-GA---TAAAAATG-TTTTG--AGAAAAGGG-GAGAACGGGGA--GCTATGTGTT----------------CGA---AGCA------TTTGTGGTTTC--GAT-AAATA-TTAC--AAGAAC---ACAGAGT-----TAAC-TAATCG-TGTCC-----TTT----TGCC--GGGAAGG----TG------GTTTCGTT-CAG---GCGA--CATTGGGCACAT--T----AATGAAGACAATCATAT-----TATAATAAAGGGGCG--GATCGCGG-----------ACTGCATTTCCC--GAGGCGCACGG-AAAATAATTCCCAGTAGCATTGAAGAAGTCATTCAAACAAAGAATGGTATTAAAGATGTCATTGTTCTCGGTGTACCTGACAAGAGTCTACACGAAGAAATTTGCG--TTTGTTACGTC-GCATATTC-A--GGTT-A-TGAAATTTCACCATTCGATGTAAAACAGTTTTG--CCTGAAATCCTTTGTTGGGGACGAAGCCGTCCATGATTTTGGAAAAATGCCATGGTATTTTCTCCGGTTCCAAAGTCTGCCAATGCTTGCTACTGGTAAGATCAACAAAAGACAGCTGCGAACCGACGCCATTCAACAGTTAGAAATGGCTGATCAGTTGTAAGGCGAACTTTTCTTATCAAAT-CTAAATATCCAAACGGAATGCCATA--AATGTATTGATTGT-TTCTTTGAAA-TTAAC
gi|4 : gttcctcctgatgTCTAGGACCAAATATCTGTCCTGTAATGGTTAACCGCCGAATTAGCAATACTTATGACAGGTGATATTGTTGTTCACCTGCCATTCAGTAACACCGATGCCAGAGAAATATTTAAGAAATAGTTTCAATT-GCAGTGTGCAAGGCCTATTTGATAGACCCTGGCAAAGGA-GAGGAATAT-TTGGA---------TATGATTTTACAAATCA--ATGCCTA-----------TA--CA-----------------TAGGAAGAC-TCGAACGTTTCAGCGTTGGTTATTCTCAGAGAAAGCAAACAATTAACTGTCC-GTGA-TGA----------------CAG-----------------T-CACG--GAATAT--TACAGTCTACTCCGAGGATGAAATTGTGATTTTTACAACGTCTGAAAGCACGGGAAAGCCTAAAATGATCCCTAAAACTCATTTCTATGCAACCAACTATGATATGATCTTCACT-GGGAAAACA-ACAATGATCGGCCATTTTCTTCGACAGTCGGATCTCCTATTCCAACAGTGTTTCGAGGGCAACCTAGAGTATTCTTTGATTCCTCCATTG-CCTCCGAAGAGCATAACACTTGGAAAATATGGGGCGTGATCAAAGACGAACAGTGCACATCAGCAACAGCAATCAAATACCTTATTTCCTTGAAGATCTGGTGGAACAAACAGATAATTACAAAGATTCACTCAAATATGA-G---GT-GATAGTCACAGGTGGACAACTGATAACCAATCTCGACACATAGGTCGTTGTTGTATTTACCAAGAATCTTACAATCACATACTGATTGGCTGAGGGAGGAT------TAGTTTCAGTATTTCCGCTTATTA-CTACTTTTGGTGAGCTAAAAGCTGGTG--ACGTAGGGAAAT---CAATACCAATCATAGA-AGTAAAGATCATCG--ATGAT-AT---TGGGAATG-TTTTGGAAAGAAACAT-GAGAAAGGGGA--GCTTTGTATA----------------CGA---GGCA------TATGTGGTTTT--G----------------GGAAC---AGACGCT-----TGAA-TGACGA-AATCC-----TTT----TGTC--TGGAATG----TC------GTTTCGTT-CTG---ACAA--TATTGTGTACAT--A----AATGAAGACAATCATAT-----TATGATAAAGGGTCG--TATCAAAG-----------ACTGTATTTCCA--GGGGTACATGA-AAAA-ATTGCCATGTAGT--------ACTCATC---ACAAAGAATGGTAT-AAAAATGCGATTGTGGTTGGTGTACTTGATAAACATCTCCACGAAGACATTTGCG--TTTGTTAT-TCAACAGACTC-T--GAGC-A-TGAAATTTCCCCAACCGATGTAAAAGAGTTATT--CCTGGAAAAGTTCGTTGGGCACGATGCAAATGGTGAACTTGAAGAAATGCCAAAGTATTTCCTTCTTTTCTTTAACCTTCCAATGCTTGTTAATGGGAAGATCAATAAAA
gi|5 : cGTGGA-AGTGAAAATCATTG--ATGGA-GA---TGGAAATG-TTTTG--AGAAAAGGA-GAAAATGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGGTTTT--GAA-AAATA-CTTC--AAGAAC---ACAGGCT-----CACT-TGATTA-AGTCC-----TAT----TGCC--TGGAAAG----AG------GTTCCGTT-CTG---GCGA--TATTGCGCACAT--G----AATGAAAACAATCACAT-----TACAATAAAAGGGCG--AATCAAGG-----------ACTGTATTTTCC--GAGGTACAAGG-AAAATTTTTCCAAGCAGTATTGAAGAATCCATTAAAACAAAGAATGGAATAAGAGATGTGGCTGTGGTTGGTGTACCTGATAAGCGCCTGTACGAAGAAGTTTGCGTTTTTGTTATGTG-ACAGATCCGA--GGGC-ATTGCAATTTCCCCA
gi|5 : tTTGCG--TTTGTTATGTG-ACAGATCC-ACGGGGCCA-TGCAATTTCCCCAAAGGTTTTAAAAGAGTTTTG--CTTAGAACAGTTTGTGGGACACAATGCTATTGATGGACTTGGAGAAATGCCAACATTTTTCCTTCAATTCCATACCCTGCCGATGCTTGTCAATGGAAAGATCAACAGAAGGCAGCTGCGACTTGACGCTATTCAACAGCTGCAATTGGCAGACCAGATGTAAAGTCTACTCTGGATATCAAAT------------------------TA-----GCACC--TT-T-GTTTTAAGAA-TTAGATGATATAAATGGA-AACGTAATCTTGATTTTTTTCTAACGACTTTTTTTTC--TCCTTGAAATATCttgcgtttgttatgtgacagatccacggggccatgcaatttccccaaaggttttaaaagagttttgcttagaacagtttgtgggacacaatgctattgatggacttggagaaatgccaacatttttccttcaattccataccctgccgatgcttgtcaatggaaagatcaacagaaggcagctgcgacttgacgctattcaacagctgcaattggcagaccagatgtaaagtctactctggatatcaaattagcacctttgttttaagaattagatgatataaatggaaacgtaatcttgatttttttctaacgacttttttttctccttgaaatatc
gi|6 : tgtggaagtgaaaatcattgatggagatggaaatgttttgagaaaaggagaaaatggggagctttgtgttcgaagaatatgtggttttgaaaaatacttcaagaacacaggctcacttgattaagtcctattgcctggaaagaggttccgttctggcgatattgcgcacatgaatgaaaacaatcacattacaataaaagggcgaatcaaggactgtattttccgaggtacaaggaaaatttttccaagcagtattgaagaatccattaaaacaaagaatggaataagagatgtggctgtggttggtgtacctgataagcgcctgtacgaagaagtttgcgtttttgttatgtgacagatccgagggcattgcaatttccccaGGTGTCACGTAGGAGCACGCCCATTCCCAGGCCTAGATCGTCAATATCATTAGCATGGATGACAGTAGAGAGGATTTTG--AGAAAAGGGTGAGAATGGGGAAAGCTTTCTGTTAAAATTGTTTGGTAAACGATACAGCAAGTTATTACTTGGTTTTTTGAACAAATATCTACGAAAGAACCACAGAAACTCATGATAACATAACGAGAGTACATCGGTTTGGACTGCCGATGGAAAAGATATGTATCGAGTATCGTTTCTGCATGCGACGTATTGCGCACATTCAGAGTAAT-AAAACATTCATATTTGTATATAAAGAAGGGGCGTAAATCAAAGGGTAATCGTGTAATATATTTCTCCAGAGGTACAAGGAAAAATAATCCC-AGTAGTATCGAGGACCTCATTATAACAATGAATGGGATAAAAAATGTGATTGTGGTTGGTGTCCCTGACAAGCGTTTATACGAAGAAGTTTGCG--TTTGTTACGTC-ACAGAAAC-A--GAGC-A-TGAAATTTCCCAAACCGATGTAGAACAGTTTTG--TATGAAGATGTTCGTAGGGCATGATGCCATTGATGGTCTTGGAGAAATGCCAAAGTATTTTCTTCGATTCCACAGTCTGCCATTGCTTGTTAGTGGAAAAATCAACAAAAGACAGTTGAGAATTGATGCCATTCAACAGCTACAATTGGCTGATCACTTATAAAGCGAACT
gi|7 : AACA----T-TCATATAGTATGCCAAT-TAA-A-------GATT----C-AT-T---TTT-AAAATTCATTCTGGTG-AATATTTTTTTT---------TTTATTTCAGAAGTCTATTTGTCGTGTCAGAATTTAGTTACCTCTATACTCCACG
gi|7 : GCAACAAATATAGCAGGTTATATCATCCGGAACGGAATTAAGAAGGGGGATACCGTTGCTCTGTTT-GGACCCAACA-CT---CTAGAATGGGTGATAGCAGAATTAGCAATAATCATGGCAGGGGG-A--GTTGTTCAAATGTCCTTCAACGTCACCGATGCCAGAGA--GGTTTTCGAAATAATCTCAATT-GTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaacaaatatagcaggttatatcatccggaacggaattaagaagggggataccgttgctctgtttggacccaacactctagaatgggtgatagcagaattagcaataatcatggcagggggagttgttcaaatgtccttcaacgtcaccgatgccagagaggttttcgaaataatctcaattgtt
gi|8 : aacattcatatagtatgccaattaaagattcatttttaaaattcattctggtgaatatttttttttttatttcagaagtctatttgtcgtgtcagaatttagttacctctatactccacgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCGACTCGTCAATTGACCTAC-AAGGACATACCACTATGAAAATATGGAACGTGATCAAAGAAGAACAATGCACGTCAGCAGTATTA-T----TACCGTATTTTCTATCAGATCTGGTGACTCACAAAGAAAATTACAAAGATTCCTTCCAACCTGA-TGAAAT-A-T--TCACAGGTGGACAACTGGTTGGCAGACTCCACACGGAGGTCGTTGGTGTATTTACAAAAACTCTTACAGTCGCCTATGGAACGACCGAGGTATTTC---CCATA-TCAGAGC--TTACACCAATTG-CCATTGATGGTCAAATGCAAGTTGGTG--ACGTAGGAAAAC---CAATGGCCGGTGTGGA-AGTGAAGATCATTG--ATGGA-GA---TGGAGATG-TTTTG--AGAAAAGGA-GAAAACGGGGA--GCTTTGTGTT----------------CGA---AGAA------TATGTGGT
gi|9 : ATTACCTCTGCTCCATTAATTTGAAGTTGTACACCGTATTAAATTAACATATACCACTGAGCAGATGT-A-ATATT-----CTAAAATAACTTTTTTGTGAGT----TAATGTAAATTC-AA---TTGTTCTG--GTAA-------TTCATTTAAATGTCTATTTTAGAGTCTTATTCGTCATGTCAAACCTCAGTTACCTCTCTACTCCACTGATCGTTCC--ATATAAATACAATACAGTTACTCAAGTGTTCAGCGAAACTA---ACAC---TCATTCCTTGATAAAGAATTGTCCATTTAGCCGATGATATTTAAACGA--AGGTTAA---AGGACTAAGCTCTGACTTGTCGT----TTCAGAC
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): ACATTTGCTTTGCTATTAAACAGAGTCAGAGATGGAACTCATACTGATGAGGACATTAAGATTATTCATGGAAAAGT