lowQualScore : 11111111111 11111111111111111111 111111111111111111111111111111111111111111111111111111111 111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 22222222222222222222222222222222222222222222222 11111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111
lowQualScore : 77777777 4 22 6666 444444 4 4 4 4 11111111111 777 4 4 4 4 8888 4 4 8888 5555555 4 22 22222222222222222222 22 2 6666666 333 777777777777777777777777777777777777777777777777777777777 33 2 1 9999999999999999999999999999999999999999999999 1 4 55555 4 55555 4 4 6666 4 4 444444 4 4 4 1 4 4 4 4 4 888888888888888 333 2 2 22 22 222 1 2 2 1 777777777777777777 2 2 2222 2 1 2 1 333 22 22 4 333333333333 11 6666 4 1 4 55555 444444 4 66666666 4 4 4 4 4 4 4 4 1 4 4 4 4 4 4 1 55 55 4 55555 444 4 4 5555555 2 1 11 11 22222222222222 111111 22222222222222222 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 111111 222222222222222222 111111111 22 333333333333333 111 222 11 66666666666666666666666666666666666666666666666 1 555555 00000000000 22 2 1 1 33 33 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1111 333333 3333333333333 2222 11 1 2 22 4 4 6666 4 55555 222 222222 1 11111111111111111111 1 99999999999999999999999999999999999999999999
lowQualScore : 44444444 0 11 1111 222222 0 0 0 0 99999999999 000 0 0 0 0 5555 0 0 5555 8888888 0 66 2 3 11111111111111111111 22 4 2 0 4 3333333 555 4 000000000000000000000000000000000000000000000000000000000 2 00 0 4 5 88 0000000000000000000000000000000000000000000000 4 5 0 22222 0 33333 0 0 2222 0 0 222222 0 0 0 7 0 0 0 0 6 0 333333333333333 555 0 0 77 77 000 5 0 0 5 888888888888888888 4 0 3 2 0 4444 0 5 0 2 3 4 5 888 44 4 77 0 333333333333 22 2222 0 7 0 22222 222222 0 44444444 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 7 55 55 0 6 22222 555 0 0 8888888 0 5 99 11 33 5 77 8 5 5 777 5 5 4 5 99999999999999 111111 66 11111111111111111 33 4 999 66 5555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 3 888888 3 6666 777777 333333333333333333 6 66 222222222 66 1 444444444444444 77 8 444 0 222 44 2 88888888888888888888888888888888888888888888888 0 8 222222 7 0 22222222222 66 1 2 0 2 9 0 8 00 66 2 5 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0000 888888 2222222222222 1111 0 9 3 7 33 5 2 0 77 0 0 1111 6 0 22222 333 1 888888 3 8 7 11111111111111111111 3 0 3 6 44444444444444444444444444444444444444444444
lowQualScore : ........ . .. .... ...... . . . . ........... ... . . . . .... . . .... ....... . .. . . .................... .. . . . . ....... ... . ......................................................... . .. . . . .. .............................................. . . . ..... . ..... . . .... . . ...... . . . . . . . . . . ............... ... . . .. .. ... . . . . .................. . . . . . .... . . . . . . . ... .. . .. . ............ .. .... . . . ..... ...... . ........ . . . . . . . . . . . . . . . . . .. .. . . ..... ... . . ....... . . .. .. .. . .. . . . ... . . . . .............. ...... .. ................. .. . ... .. ............................................................................................................................ . ...... . .... ...... .................. . .. ......... .. . ............... .. . ... . ... .. . ............................................... . . ...... . . ........... .. . . . . . . . .. .. . . ................................................................................................ .... ...... ............. .... . . . . .. . . . .. . . .... . . ..... ... . ...... . . . .................... . . . . ............................................
lowQualScore : 00000000 0 00 0000 000000 0 0 0 0 00000000000 000 0 0 0 0 0000 0 0 0000 0000000 0 00 5 0 55555555555555555555 55 0 5 0 0 0000000 000 0 000000000000000000000000000000000000000000000000000000000 5 55 0 0 0 55 5555555555555555555555555555555555555555555555 0 0 0 00000 0 00000 0 0 0000 0 0 000000 0 0 0 0 0 0 0 0 0 0 000000000000000 000 0 0 55 55 555 5 0 0 5 000000000000000000 0 0 0 5 0 0000 0 5 0 5 0 0 5 000 00 0 55 0 000000000000 00 0000 0 0 0 00000 000000 0 00000000 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 00 00 0 0 00000 000 0 0 0000000 0 0 00 22 99 7 99 8 0 0 222 0 0 4 0 44444444444444 444444 44 22222222222222222 33 4 000 77 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1 888888 1 5555 333333 555555555555555555 2 55 777777777 66 9 666666666666666 99 0 000 8 444 66 2 55555555555555555555555555555555555555555555555 0 8 000000 0 7 77777777777 77 2 2 5 2 0 0 8 00 55 8 0 333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0000 333333 5555555555555 2222 2 5 2 3 00 0 5 0 55 0 0 0000 0 0 00000 333 0 000000 3 3 0 77777777777777777777 3 7 7 7 00000000000000000000000000000000000000000000
consensus : CCACTATATTTCTCA--TATT--GGTCTTTCTTT-GAAAACCTTTGATTCCCTTTCACTAACTAGGA-TG-ATTGTGCCATGTTTGTATGCAA-TGGT-CTGGA-AGCGGAGAATAA-TCGAAA-TGTTAGGCGTTGTACTCTGTAACATCTCGTAT---ACAAAGGGGATTGTAT---ACGAT-GCCCAAAAAGAAATGT-AACGATAGTACGAAAACTAAAACTAA-ACCCCT----CCAAAAGGTCAAG-TGGTGGTAATGGT----GTGTGGAGTCAAACGAGTGATAAAGCT-AATATCTTTCTTGCCGACCTTTGAAATNTTNAATCAATGGGGA-T-GGGAGGTTTGAGNTTCTNCTTCTATNACCGCATGGAGNTCACAT-ATGCATCACTTCAAGCTTACATCCGTACANGTACCATTCATTAACGTAACATCTTNGNGCNACGCGGTGAACTATTGTTTTGTGCNTGNGTAAAACNTAACAAGATAATGAANGTTGTCCAAAAAGNAGGGGACNNGGTGNCCCCTACTCGCTCCTCGATTCTACATT-GCCTGTATT--AAANGTCTATATAATGATAACAAATCCCAACAA-AACACGACATAATTTCTATCAGAACATGTCACAGTAA-CCGATCTTTGTTTG-ATCCA-TGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGG-ACACGAAAAATGTTTCAAAATGTAACTCTGT-TATAAAGATATACACTGGTACAGGCATTCTGC-TTCCTACCTGCA-TTCCGGACATTCCCTTCAATGTAATGAC-TTTAATAT-TTA-ATG-ACTT--GTGGGTCCGAAACTCTTGGAATGCGGGAATGGAATCCCTTATTGGTGCGTTATTCAGGAAACATGCGACGTTTATGGGTGTCAATATATAAATCGCAGACATTGTGTTTNACGATCANTCGTACAAAGTTACAAGTGTTTGAATATGTTGAGANATNATNCACGAATTAATGGCAANAAAAANGACTACCAACCTGTTAACATGAATAAACGTAGACACGGTCTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCAGAGATCAAC-TA-TTAATGATGTTCTTCATTTTTAAAAAAAACCGTTATGTATTGTA-AGT-TGCGAATTCGTTATAGAC-TGTGTATCATTACAAAATACTTCCTAGTAGTATG-GAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAAC-CTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGT-GAACCAATTTGGAGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAA-TAAGGGA-CTGGAAGAAATTGTTAAATTAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAG-AATGCTGGATTTCAAACCAAAACGA-GTATGCTGATTAA-TTGCTTCTAC--TTAGATACATGCACTCATTCATNTCTTTTTCCTTACCAAGC-AC-AA--CAGAAGAT-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TT--------------GATCAA----ATAC-A-TTTTGATC-AA-AC-ATCCA-G-ACATG-TAT-A---CA------AGG------------GATCAC---------------AT-----------GA-----------CTACTA-AAA-------TAT--------------------A-----G--AT-CA------CA-T----G------ACTA----------C-TA----AAA-A-TATACA------TGCACCT-AAATGAACA----NT-A---G---AA--ATC-A---CAAAATTGTGA-AAGAGT-----------------------ATTCCAAACATACAGATGTACAAACT-GTTTGTGACTTAATAAATT-----GGCACCATTTAAAA-----------CCAA-AGAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAGGTGTTGATGTACATA-------------ATCTACA-CC-A-ATAC----ATCTATAATCAG-TA-CCGNT-ATAGATCCA-GTATCGGTGTACATA-CCTA-A-CAGTAT-TGCCTATANATTTGACAAGTACAAAAACAAAGGT------AACATG------TA--NG-TGACT----AGCCAATACGAATATCAATAAAATAATNTGCAAAGGTGGCGGTCATNACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACTAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACT-GTTAAAGCATGTAACATAGCAGG---CAGACTATAA-CAAGNTCAG-GTATCCCAG------------TACG---TTACCGGCCCCAGCAGG-TAACACAGNATAGAACCATTCGGCAACCTCAGGTGATCCGGAACCTACATCAAA--CTC-GCTGTATG
Reference ( gi|1 ) : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTGAATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGT-GTACTCTGTAACATC--GTATTTTA-AAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTAC-AAAACTAAAACTAATACCCCTTTTGCCAAAAG-TCAAGGTGGTGGTAATGGTTTGGGTGTGG--TCAA-CGAGTGATAAAGCTAAATATCTTTCTC-CCGACCTTTGAAATCTTTAATC-GTGGGGAGTGGGGAGG---GAGG-TTTTCTTCTATCACTACATGG-GTTCA-ATGATTCATCACTTCAAGCTTACATCCA---AAGTATC------TA----AACA-CTTTACTTTACAC-GTGAAC---------ATGCATGT---AAACCTAACAAAAT-ATGAATGTTGTCCAAAAAGCGAGGAACCAG--AGCTCC--CT--TTCCT-GAT--TACATTCGCCTGTATTTAAAAAGTCTATATAATGATAAC-AATCCCAACAACAAC-CGACAT-ATTTCTATCAGAACATGTCACA-TAAGCCGATCTTTGTTTGTATCCATTGACC-AT-ATATAAAGTAAGTAT-AATAACA-TCGTAA-AAGGTACACG-AAAATGTTTC-AAATGTAACTCTGTATAAAAAGATATACACTGGTACAGGCA-TCTGCTTTCCTA-CTGCATTTTCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT--GTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATCAAT-ACAGACATTGTGTTTTATGAT-ATTCATAC-AAATTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAAT-AAAATG--TACCAACCTGTTAACATGAAT-AACGTAG-C---GTGTT--AGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGAAGATCAACTTATTTAATGATGTTC-TCATTTTAAAAAAAAACC-TTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTG-ATCATTAC-AAATACTTCCTAG--GTATATGAGTCTGGGTTTTTAGATC-TTGGTAAG-TTTCTATCTTAAACACTATGACGC-AGCGT-CACGTTACCAGTAACTAATAAATACAC-TGGAGTTG-TCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTTGGGGGAA-GAAGGAAAATGTGTC-TACAGAGGACGCGA-TCCAAAAATTAAGGGACCTGGAAGAAA-TGTTAAATAAAAAATCAGAA--CATCTGGAACA--TAAAATTCATGAGGAAAC-GGAAAAGGC-TAGAAATGCTGGATTTCAAAAC-AAACGAGGTATGCTGATTAATTTGCTTCTACTTTTAG-TACATGTACT-ATTCATTCCTTTTCCCTTACCAAGA-AC-AA--CAGACGAT-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TT--------------GATCAA----ATAC-A-TTTTGATC-AA-AC-TTTTA-G-ATATG-TAT-A---CA------AGG------------AATCAC---------------AT-----------GG-----------CTACTA-AAA-------TAT--------------------A-----G--AT-CA------CA-T----G------ACTA----------C-TA----AAA-A-TATACA------TGTACCT-AAATGAACA----GT-A---G---AA--ATC-A---CAAAATT-TGT-AAAAGT-----------------------A-----------------------CT-GTTTGTGACTGAATAAATTTCTGTAGCACAACTTAAAAA--TTAAACTGCCAAAAGAAAACAAACTTAAGACAGTGACAAATAAC-AGCTATCAAAATACTCCTATCTACAGGTATTGGTGTACATA-------------ACCTACA-C--A-ATAC----ATCTATTATCAG-TA-CTGCTTATAGATTTAGGTATTGGTGTACATAACCTACATCAGTAC-TGCTTATAGATTTGACAAGTACAAAAACAAAGGT------AACATG------TA--TG-TGACT----AGCCAATAAGAATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAG-AAGATCGT--GCTGGTCATGATCCCACCAAAGCATCAGAT-AGCACAGCACA-CAAACTATAAGATCAGGTGACAG-GT-AACCAAACTAATGTTG-TTTTCAAAATAAATGTTAGAGTAAT-ACTGGTTAAAGCATGTAACATAGCAAG---CAAACTATAAACAAGATCAG-GTAACCAAACTAACC-TTGCCTACAAAATTACCGGCCCCAGCAGG-TAGCACAGCATACAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCTCGGCTGTATGA
gi|2 : CCACTATATTTCTCA--TATT--GGTCTTTCTTT-GAAAACCTTTGATTCCCTTTCACTAACTAGGA-TG-ATTGTGCCATGTTTGTATGCAA-TGGT-CTGGA-AGCGGAGAATAA-TCGAAA-TGTTAGGCGTTGTACTCTGTAACATCTCGTAT---ACAAAGGGGATTGTAT---ACGAT-GCCCAAAAAGAAATGT-AACGATAGTACGAAAACTAAAACTAA-ACCCCT----CCAAAAGGTCAAG-TGGTGGTAATGGT----GTGTGGAGTCAAACGAGTGATAAAGCT-AATATCTTTCTTGCCGACCTTTGAAATCTTTAATCAATGGGGA-T-GGGAGG---GAGGTTTTTCTTCTATCACTACATGGAGTTCA-AT-ATGCATCACTTCAAGCTTACATCCA---AAGTATC-------A----AACATCTTTAC-TTACACGGTG-AC----------TGCATGTGTAAAACCTAAC-AAAT-ATGAATGTTGTCCAAAAAGCAGGAAACCAA--GCCTCC--C----TCCT-GAT--TA-ATT-GCCTGTATT--AAAAGT-TATATAATGATAACAAATCCCAACAA-AACACGACATAATTTCTATCAGAACATGTCACAGTAA-CCGATCTTTGTTTG-ATCCA-TGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGG-ACACGAAAAATGTTTCAAAATGTAACTCTGT-TATAAAGATATACACTGGTACAGGCATTCTGC-TTCCTACCTGCA-TTCCGGACATTCCCTTCAATGTAATGAC-TTTAATAT-TTA-ATG-ACTT--GTGGGTCCGAA---CTTGGAATA-GGGAATG-AATT--TTAT--GTG-G-TATTCAGAAAACATGC-ACG-TTATGGGTGTCAATATAT-A---ACAGACATTGTG-TTTATGAT-ATTCATACAAAATTACAAATA-TTGAATATGTTGA-AGATTATTTACG-ATTAATGGCAATAAAAATG--TACCAACCTGTTAACATGAATAAACGTAGACACGGTCTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCAGAGATCAAC-TA-TTAATGATGTTCTTCATTTTTAAAAAAAACCGTTATGTATTGTA-AGT-TGCGAATTCGTTATAGAC-TGTGTATCATTACAAAATACTTCCTAGTAGTATG-GAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAAC-CTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGT-GAACCAATTTGGAGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAA-TAAGGGA-CTGGAAGAAATTGTTAAATTAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAG-AATGCTGGATTTCAAACCAAAACGA-GTATGCTGATTAA-TTGCTTCTAC--TTAGATACATGTACT-ATTCATTTCTTT--CCCTACCAAGA-ACAAA--CAGACGAT-ACCA-A-TTAT-GT-TGAAATTG-TATTTTA-TT--------------GATCAA----ATAC-ATTTTTGATCAAA-ACATTTTA-G-ATATGATAT-A---CA------AGG------------AATCAC---------------AT-----------GG-----------CTACTA-AAA-------TAT--------------------A-----G--AT-CA------CA-T----G------ACTA----------C-TA----AAATA-T-TACA------TGTACCTAAAATGAACA----GT-A---G----A--ATC-A---CAAAA-T-TGTAAAAAGT-----------------------A-----------------------CTGGTTTGTGACTGAATAAAATTCTGTAGCACAACTTAAAAATTTTAAATTGCCAAAAGAAAACAAACTTAAGACAGTGACAAATAACAAGCTATCAAAATACTCCTATCTACAGGTAATTGTGTA-ATA-------------A-CTACACC--A-ATAC----ATCTATTATCAGTTA-CTGCTTATAGATTTAGGTATTGGTGTACATAACCTA-ATCAGTACTTGCTTATAA--TTGACAAGTACAAAAACAAAGGT------AACATG------TAATTGTTGACT----AGCCAATAAG-ATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAAGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACTAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACT-GTTAAAGCATGTAACATAGCAAG---CAAAATATAAACAAGTTCAGAGTAACCAAACTAACCTTTGCCTACAAAATTACCGGCCCCAGCAGGTTAGCACAGCATACAACCATTCGGCAACCTCAGGTGATCCGGAACCTACATCAAA--CTC-GCTGTATG
gi|8 : tTT-CCAATCTTTGAAATATTGAATC-A-----------AAGGTTTGAGC-TCTACTTCTATAACCGTATGG-GATCACAT----CATCATTTCAAGCTTACATTCGTACATGTACCATTCATTAACGTAACA-CTTGGGGCAAAGC-GTGAACTATTGTTTTGTGTTTGG---AAATATAA-AAGATAATGAAAGTTGT-TAAAAAGAAAAGGACATGGTAACCCCTACTCGCTCCTCGATTCTACAT--GCCTGT-T---AAATGTCTAT
gi|11 : CCGAAACTCTTGGAATGCGGGAATGGAATCCCTTATTGGTGCGTTATTCAAG-AACATGCGACGTTTATGGGTGTC-ATATATAAATCGCA---AT----TTTAACGATCAGTAGTAC-AAGT----AGTGTTTGAATA-ATTGAGATATGATACACAAATTA---GCAAA-AAAAAGACTACCg
gi|7 : TGCACTCATT-ATGTCTCTTCCTTCACCAAGC-AC-ATGTCAGAAGAT-A-TA-A-TTATCGTGTGAAATTGGTATTTTA-TT--------------GATCAAGCGTAAACTA-TTT---TC-AAGAC-ATTGG-A-AGAAG-AAT-A---CAGACTATAGC------------GATCACGCTTGATTGACAAAAAT-----------GA-----------CTACCA-AAA-------TA---------------------A-----T--GT-CA------CATT----G------ACTG----------CGGA----AAA-G-TATAGA------T
gi|5 : taatgcgtgcgtcttcctacaatcagCTTCCTCCTTCCCAAGC-AC-AA--CAGAAGAT-A-TA-C-TTAT-GT-TGAAATTG-TATTTTACTT--------------GATCAA----A-AA-A-TT----TC-AG-AC-ATGTA-GAAAAGG-TAC-AACTTA------AAA------------GATCAC---------------ATGACTGCAAAGAGA-----------CTACTA-AAA-------TAT-----------------------------GT-TA------CA-T----G------ACTG----------C-CA----AAA-A-TA-----------G-ATC--AAATGATTA----CT-A---A---AA--ATcacatgacacgtaaacatatacctacaatct
gi|17 : tgTTCCTTACCAAGC-AC-AA--CAGAAGAT-A-TA-A-TTAT-GT-TGAAATTG-TATTatacctacaactacatgtgtacaactatctagtacaaaaatgtatgcaccaaatgaacaatcagctgaattcacaaaattgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggcaccatttaaaaccaagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaggtgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattttcagtattgc
gi|3 : cCCTTCCCAAAC-AC-AA--CAGAAGAT-A-TATACTTAT-GT-TGAAATTG-TATTTTA-TTGATCAAATATACTCGATCAA----A-AA-A-TTT----C-AG-AC-ATGTA-G-ACAAG--AT-A---CAACTTA-AAA------------GATCAC---------------AT-----------GATTGCAAAATGACTACTA-AAA-------TATGTCACATGACTGCCAAAAAAA-----G--AT-CA------AA-T----G------ATTA----------C-TA----AAA-A-TATAC
gi|6 : ctCCTTACCAAGC-CC-GA--GAGAAACT-A-CG-T-TTAT-GT-TGAAATCA-TATTTTA-TA--------------GATAAA----AAAA-A-TC---A-C-AG-AC-ATCTACA-AAATG-AAC-----CAT-----AGA------------GATAAT---------------AT-----------GA-----------CTGTTA-AAA-------TAT--------------------A-----G--AT-CA------CA-T----G------ACTA----------C-TA----AAA-A-TATACC------TAAAAGT-AAATG--CA----TT-----G---AACTATCTAGTCCAAAA-T-TGT-AActacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|9 : tcctCTTTACCTAAATAC-AA--CAGAAGATTA-CA-A-TGAT-GT-TGGATATG-CATTTTA-TT--------------GAT-GA----ATAC-A-CTTTGATA-AA-TC-ATCCA-G-TCATG-TATGA---TA------A--------------AA--AC------------------------------------------------AAA-------TATAAC-----------------A-----G--AT-CA------CA-T----G------ACTAAAACATTAAGC-TA----AAA-ACTATCCAAATATTTGTATCT-AATTGgcaccaaatgaacaaacagcagaaatcacaaaatctaacagtattcaaaacatacaaatgtacgaactggttgtgacttcata
gi|10 : tgctccctAGAC--T-A-CA-A-TGAT-GT-TTAAAAGG-TATTTAT-TT--------------GATCAA----ATAC-A-CGTTGATC-AA-CA-ATCCG-G-TCATG-TAT-A----A------TGG------------AA--AC------------------------------------------------AAA-------TATAAC-----------------A-----G--AT-CA------CA-T----G------ACTA----------C-TA----CAA-A-TATACtaaaagaatatacttcctcaaatcataggaatgta
gi|4 : taatatccgtttccctctaaatccatacctaaacaaaacagaagctgttaAATTG-TATTTTA-TT--------------GATCAA----ATAT-A--CTTGATCAAA-AA-AATCA-G-ACATG-TAG-A---AA------AGGTACAACTTAAAAGATCACATGACTGCAAA----AT-----------GA-----------CTACTA-AAA-------TAT-----------------------------GT-CA------CA-T----G------ACTG----------C-CA----AAA-A-TA-----------G-ATC--AAATGATTA----TT-A---A---AA--ATctaaaactacatacac
gi|15 : TTGATC-AA-CA-ATCCA-G-ACATG-TAT-A---AA------AGG------------AA-CA------------------------------A-----------CTA-TA-AAA--------AA--------------------A-----A--AT-CA------CA-TGACAG------ACTA----------C-TA----GAATA-CATACA------CGatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|4 : ccATCAA---------------AT-----------GA-----------TTATTA-AAAATATACCTAT--------------------A-----ACTAC-CATGCGTACA-T----GCA----ACTAT---------C-TAGTACAAA-A--ATGTA------TGCACC--AAATGAACA----ATCATCTG---AA--ATC-A---CAAAATTGTGA-AAGAGTACTCAAAACATACAGATGTACAAA-----------------------CT-GTTTGTGACTTAATAAATT
gi|5 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaatagATCAA---------------AT-----------GA-----------TTACTA-AAAA------TAT--------------------ACCTACA--AC-TA------CA-T----GTGTACAACTAT---------C-TAGTACAAA-A--ATGTA------TGCACC--AAATGAACA----ATCA---GCTGAA--TTC-A---CAAAATTGTGA-AAGAGT-----------------------ATTCCAAACATACAGATGTACAAACT-GTTTGTGACTTAATAAATT-----GGCACCATTTAAAA-----------CCAA--GAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAGGTGTTGATGTACATACAAATAAATTGTAATCAACA-CCAATATAC----ATCCATTTTCAG-TA-TTGCgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|13 : tgcttcctccttcccaagcacaacagaagatatacttatgttgaaattgtattttacttgatcaaaaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaaaatag---------------AT-----------GA-----------CTACTA-AAA-------TAT--------------------G---------T-CA------CA-T----G------ACTA----------A-TA----AAA-G-TGTAC
gi|3 : aaACTACAAG-------TAT--------------------A-----C--ATGTA------CA-T----GCA----ACTAT---------C-TAGTACAAA-A--ATGTA------TGCACC--AAATGAACAATCAGC-A---G---AA--ATC-A---CAA--TG-TGA-AAGAGT-----------------------ATTCCAAACATACAGATGTACAAACT-GTTTGTGACTTAATAAATT-----GGTACCATTTAAAA-----------CCAA--GAAAGAAGACTTGTGGCAGAGCCAAATAAT-ACCTATCAAAG-ACTC--ATGTACAGATGTTGATGTACATA------------------CA----A-ATAA----AT-TGTAATCAA-CA-CCAAT-ATACATCCAT-TCTCAGTATA--------------GTA---GCTTATACATCTGACAAGTACAAAAAGAAAGGTAACATGAACATG------TA--AG-TGACT----AGCCAATACGAGTATCAACAAActtctgtaataactacatgcaactatctagtacaaacatgtatgcaccaaatgaacaat
gi|4 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaAGAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAAGTGTTCATGTACATA------------------CA----A-ATAA----A-CTGTAATCAA-CA-CCA---ATA----------------TCCAT--CCT----CAGTAT-TGCCTA---ATTTGACAAGTACAAAAACAATGGT------AACATGAACATGTA--AG-TGACT----AGTCAATACGAATATCAATCAAATCATTTGCAAAGGTGGgcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|2 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaatagatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccCAAGTACTGAT-TAGGTT-------------ATGTACA-CC-A-ATACCTAAATCTATAAGCAG-TAACTGATAATAGAT----GTATTGGTGTAGTTA--TTACA-CA--AT-TACCTGTAGAT
gi|14 : tccactatatttctcatattggtctttctttgaaaacctttgattccctttcactaactaggatgattgtgccatgtttgtatgcaatggtctggaagcggagaataatcgaaatgttaggcgttgtactctgtaacatctcgtatacaaaggggattgtatacgatgcccaaaaagaaatgtaacgatagtacgaaaactaaaactaaacccctccaaaaggtcaagtggtggtaatggtgtgtggagtcaaacgagtgataaagctaatatctttcttgccgacctttgaaatctttaatcaatggggatgggagggaggtttttcttctatcactacatggagttcaatatgcatcacttcaagcttacatccaaagtatcaaacatctttacttacacggtgactgcatgtgtaaaacctaacaaatatgaatgttgtccaaaaagcaggaaaccaagcctccctcctgattaattgcctgtattaaaagttatataatgataacaaatcccaacaaaacacgacataatttctatcagaacatgtcacagtaaccgatctttgtttgatccatgaccaataatataaagtaagtataaataacagtcgtaataaggacacgaaaaatgtttcaaaatgtaactctgttataaagatatacactggtacaggcattctgcttcctacctgcattccggacattcccttcaatgtaatgactttaatatttaatgacttgtgggtccgaacttggaatagggaatgaattttatgtggtattcagaaaacatgcacgttatgggtgtcaatatataacagacattgtgtttatgatattcatacaaaattacaaatattgaatatgttgaagattatttacgattaatggcaataaaaatgtaccaacctgttaacatgaataaacgtagacacggtctttaaggaggattaaactgaacagagaaaaaaatcgctaatcttccagaactttgccagagatcaactattaatgatgttcttcatttttaaaaaaaaccgttatgtattgtaagttgcgaattcgttatagactgtgtatcattacaaaatacttcctagtagtatggagtctgggtttttagatctttggtaagctttctatcttaaacctatgacgcaagcgtacacgttaccagtaactaataaatacacttggagttgttcgctcgttgaaacatatattcactatggcctcgaagttgtgaaccaatttggagggaaggaaggaaaatgtgtcttacagaggacgcgattccaaaaataagggactggaagaaattgttaaattaaaaatcagaacccatctggaacatttaaaattcatgaggaaacggggaaaggcgtagaatgctggatttcaaaccaaaacgagtatgctgattaattgcttctacttagatacatgtactattcatttctttccctaccaagaacaaacagacgataccaattatgttgaaattgtattttattgatcaaatacatttttgatcaaaacattttagatatgatatacaaggaatcacatggctactaaaatatagatcacatgactactaaaatattacatgtacctaaaatgaacagtagaatcacaaaattgtaaaaagtactggtttgtgactgaataaaattctgtagcacaacttaaaaattttaaattgccaaaagaaaacaaacttaagacagtgacaaataacaagctatcaaaatactcctTG------TA--TA-AAACTTTCCAGGTAATATGAATATGAATAAA-TAATGTGTAAAAGTAG-GGTCATAACCCACAAGTTGAA-AGGATCAT--cttataattgacaagtacaaaaacaaaggtaacatgtaattgttgactagccaataagatatcaataaaataaaatgcaaaggtggcggtcatcacccacaagttgagaaagatcgtgagctggtcatgatcccaccaaagcatcagataagcacagcacaccaaactataagatcaggtgacagtgtaaactaaactaatgttgtttttcaaaataaatgttagagtaatcactgttaaagcatgtaacatagcaagcaaaatataaacaagttcagagtaaccaaactaacctttgcctacaaaattaccggccccagcaggttagcacagcatacaaccattcggcaacctcaggtgatccggaacctacatcaaactcgctgtatg
gi|3 : AGCAGGTAACAGACTATAA----GGTCAG-GTATCCCAG------------TACA---TTACCGGCTCCAGCAGG-TAACACAGTATAGAA
gi|16 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagcccc---CAGACTATAA-TAAGCTCAG-GTATCCCAG------------TACG---TTACCGGCCCCAGCAGG-TGACAAAGGATAGAAac
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|12 ): ATTGGATCATTTCATCAGTTCAAGCATACACTCTCACCATTCAATAATGTATGGGAACCAACCACTCCATCATACGTTGTGCATGTACAAAGAGCAGATAATGAAGGCCGTCAAAAAGAGTATCACCCTATCCTCTATTGTGCATACC
Unaligned ( gi|18 ): CAACCTCGGTGATTCCGGAATCTATATCAAACCTCCGGCTGTATGA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22 22 2 2222 2 2 2 2 2 1 11 333 1 333 2 2 1 2 4444 1 2 4444 11 1 2 1 22222222222 333 11 2 3333333 222222222222222222222222222222222222222222222222222222222222 2222 11 1 666666666666666666666666666 1 11 1 11 1 2 1 1 1 2 2 2 1 1 1 1 1 2 1 1 2 1 2 1 2 2 2 2 2 22 333 22 11 22 22 2 2222 1 2 1 2 22 22 33 1 22222 11 2222 1 1 2 2 2 1 1 11 2 1 1 2 1 1 1 1 2 1 1 1 2 2 1 11 11 1 1 2 1 2 22222 11 111 1 2 1111111111 222222222222222 11111111 222222222222 111111 1111111 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 222222 222222222 22 222222222222222222 11111 111111111 222222222 11 55555555555 111 1 1 22 55555555555 11 2222 11 666666666 11 222222 222222 111 1 1 11 1 1 1 1 1 1 2 22222 22 77777777777777777777 1 1 3333333
lowQualScore : 77 77 0 3 2222 0 0 0 0 0 5 88 555 5 555 0 0 5 0 2222 5 0 2222 88 5 0 5 1 1 88888888888 777 1 99 1 1 11 3 1 1111111 0 999999999999999999999999999999999999999999999999999999999999 1 9999 11 55 6 66 1 5 444444444444444444444444444 5 88 2 3 3 7 88 1 6 5 0 5 5 5 0 0 0 5 5 5 5 5 0 5 5 0 4 5 0 5 0 0 0 0 0 77 777 44 33 77 00 6 0 7 3 7 7 7 5555 6 7 4 0 3 1 0 7 2 7 0 88 7 7 3 1 1 11 7 22 11 1 00 5 66666 2 88 2222 5 4 5 0 0 0 5 5 88 0 5 5 0 5 5 5 5 0 2 5 5 5 0 0 5 4 77 88 5 5 0 2 5 0 77777 88 666 7 3 0 3 6 1 22 8 4 66 8888888888 4 555 4 4 4 4 777 666666666666666 4 11111111 000000000000 99 000000 77 3333333 888888 66 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 2 777777 2 5555 444444 333333333 444 999999999 1 2 00 444444444444444444 11111 4 6 666666666 5 0 1 1 888888888 11 88888888888 444 6 1 8 6 22 8 3 22222222222 5 00 1 8 2222 5 99 1 6 1 2 111111111 77 2 8888 888888 888888 444 0 3 0 3 55 6 1 6 2 88 5 5 5 5 5 5 0 00000 1 77 6 1 8 6 2 00000000000000000000 6 1 2 0 3 4444444
lowQualScore : .. .. . . .... . . . . . . .. ... . ... . . . . .... . . .... .. . . . . . ........... ... . .. . . .. . . ....... . ............................................................ . .... .. .. . .. . . ........................... . .. . . . . .. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .. ... .. .. .. .. . . . . . . . .... . . . . . . . . . . . .. . . . . . .. . .. .. . .. . ..... . .. .... . . . . . . . . .. . . . . . . . . . . . . . . . . . .. .. . . . . . . ..... .. ... . . . . . . .. . . .. .......... . ... . . . . ... ............... . ........ ............ .. ...... .. ....... ...... .. ................................................................................................................................ . ...... . .... ...... ......... ... ......... . . .. .................. ..... . . ......... . . . . ......... .. ........... ... . . . . .. . . ........... . .. . . .... . .. . . . . ......... .. . .... ...... ...... ... . . . . .. . . . . .. . . . . . . . ..... . .. . . . . . .................... . . . . . .......
lowQualScore : 55 55 0 0 0000 0 0 0 0 0 5 00 000 0 000 0 0 0 0 5555 0 0 5555 00 5 0 0 0 0 77777777777 777 0 33 0 0 33 7 0 7777777 2 555555555555555555555555555555555555555555555555555555555555 0 8888 00 88 5 55 0 0 000000000000000000000000000 0 22 5 2 3 3 33 0 7 5 0 5 5 0 0 0 0 5 5 5 0 5 0 5 5 0 0 5 0 0 0 0 0 0 0 55 333 00 33 00 77 7 7 3 3 3 3 3 0000 7 3 0 7 3 0 7 3 0 3 7 00 3 3 3 0 0 77 3 77 33 0 33 5 00000 5 55 0000 5 0 0 0 0 0 5 5 55 0 5 0 0 5 5 5 5 0 5 0 5 5 0 0 5 0 55 55 0 0 0 5 5 0 77777 33 000 3 3 7 3 7 0 66 9 4 11 7777777777 4 444 4 4 0 4 888 000000000000000 4 66666666 555555555555 55 444444 11 0000000 777777 44 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 222222 5 3333 777777 444444444 444 666666666 2 9 11 111111111111111111 11111 3 6 000000000 7 7 4 5 000000000 00 33333333333 999 0 4 0 0 00 0 8 44444444444 0 88 4 0 6666 0 22 0 4 4 5 000000000 00 0 0000 888888 888888 888 0 2 8 2 00 7 0 7 0 00 5 0 5 5 5 0 0 88888 4 00 4 0 0 2 5 77777777777777777777 7 0 5 7 3 3333333
consensus : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCAATGGGGA-T-GGGAGG---GAGGTTCTTCTTCTATCACTACATGG-GTTCA-AT-AT-CATCACTTCAAGCTTACATCCGT--AAGTACCATTCA-TAACGTAACA-CTTNGCGCTACGCGGTGAACTAT--TGC-TTGTGCATGTGCAAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAGGTANC-CCCTACTC-CTCCTCGATT-TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATGGAATC-CTTAT-TGGTGCGTTATTCAAGAAACATGC-ACGTTTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATATTTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATG--TACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAA-T---TGCTTCTAC--TTA-GATACA-TGTACT-ATTCATTTCTCTTTCCTTACC-AAGCAC-AA--CAGAAG--------A-TA-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCA---A----A----T-----AC-A-TCTT---GA------------TC--AA-ANA--TCCAGACA-------TG-T----ATACA------AG------------G------------GA-------------TCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACAA----T----A---G---AAAT-----CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCNTATANATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGT------AACATG------TA--NG-TGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATA-AACAAGNTCAG-GTANCCNAA------------TAC---ATTACCGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
Reference ( family-1450 ) : CCACTATATTTCTCA--TATT--GGTCTTTCTTT-GAAAACCTTTGATTCCCTTTCACTAACTAGG-AT-GATTGTGCCATGTTTGTATGCAA-TGG-TCTGGA-AGCGGAGAAT-AATCG-AAATGTTAGGCGTTGTACTCTGTAACATCTCGTA---TACAAAGGGGATTGTA---TACGA-TGCCCAAAAAGAAATG-TAACGATAGTACGAAAACTAAAACTAA-ACCCCT----CCAAAAGGTCAA-GTGGTGGTAATGGT----GTGTGGAGTCAAACGAGTGATAAAGCT-AATATCTTTCTTGCCGACCTTTGAAATNTTNAATCAATGGGGA-T-GGGAGGTTTGAGNTTCTNCTTCTATNACCGCATGGAGNTCACAT-ATGCATCACTTCAAGCTTACATCCGTACANGTACCATTCATTAACGTAACATCTTNGNGCNACGCGGTGAACTAT--TGTTTTGTGCNTGNGTAAAACNTAACAAGATAATGAANGTTGTCCAAAAAGNAGGGGACNNGGTGNC-CCCTACTCGCTCCTCGATTCTACATT-GCCTGTATT--AAANGTCTATATAATGATAACAAATCCCAACAA-AACACGACATAATTTCTATCAGAACATGTCACAGTAA-CCGATCTTTGTTTG-ATCCA-TGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGG-ACACGAAAAATGTTTCAAAATGTAACTCTGT-TATAAAGATATACACTGGTACAGGCATTCTGC-TTCCTACCTGCA-TTCCGGACATTCCCTTCAATGTAATGAC-TTTAATAT-TTA-ATG-ACTT--GTGGGTCCGAAACTCTTGGAATGCGGGAATGGAATCCCTTAT-TGGTGCGTTATTCAGGAAACATGCGACGTTTATGGGTGTCAATATATAAATCGCAGACATTGTGTTTNACGATCANTCGTACAAAGTTACAAGTGTTTGAATATGTTGAGANATNATNCACGAATTAATGGCAANAAAAANGACTACCAACCTGTTAACATGAATAAACGTAGACACGGTCTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCAGAGATCAAC-TA-TTAATGATGTTCTTCATTTTTAAAAAAAACCGTTATGTATTGTA-AGT-TGCGAATTCGTTATAGAC-TGTGTATCATTACAAAATACTTCCTAGTAGTATG-GAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAAC-CTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGT-GAACCAATTTGGAGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAA-TAAGGGA-CTGGAAGAAATTGTTAAATTAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAG-AATGCTGGATTTCAAACCAAAACGA-GTATGCTGATTAA-T---TGCTTCTAC--TTA-GATACA-TGCACTCATTCATNTCTTTTTCCTTACC-AAGCAC-AA--CAGAAG--------A-TA-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCA---A----A----T-----AC-A-TTTT---GA------------TC--AA-ACA--TCCAGACA-------TG-T----ATACA------AG------------G------------GA-------------TCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACAN----T----A---G---AAAT-----CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAGGT-GTTGATGTACATAATCTACACCAATACATCTATAATCAG-TACCG-NTATAGATCCA-GTATCGGTGTACAT-ACCTA-A-CAGTA-TTGCCTATANATTTGACAAGTACAAAAACAAAGGT------AACATG------TA--NG-TGACTAGCCAATACGAATATCAATAAAATAATNTGCAAAGGTGGCGGTCATNACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACTAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACT-GTTAAAGCATGTAACATAGCAGG---CAGACTAT--AACAAGNTCAG-GTATCCCAG------------TAC---GTTACCGGCCCCAGCAGG-TAACACAGNATAGAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
gi|1 : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTGAATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCG-TGTACTCTGTAACA--TCGTATTTTA-AAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTAC-AAAACTAAAACTAATACCCCTTTTGCCAAAA-GTCAAGGTGGTGGTAATGGTTTGGGTGTG--GTC-AACGAGTGATAAAGCTAAATATCTTTCTC-CCGACCTTTGAAATCTTTAATC-GTGGGGAGTGGGGAGG---GAGGTT-TTCTTCTATCACTACATGG-GTTCA-ATGATTCATCACTTCAAGCTTACATCCA---AAGTATC------TA----AACA-CTTTACTTTACAC-GTGAAC-----------ATGCATGT---AAACCTAACAAAAT-ATGAATGTTGTCCAAAAAGCGAGGAACCAGA-GCT-CCCT-----TTCCT-GAT--TACATTCGCCTGTATTTAAAAAGTCTATATAATGATAAC-AATCCCAACAACAAC-CGACAT-ATTTCTATCAGAACATGTCACA-TAAGCCGATCTTTGTTTGTATCCATTGACC-AT-ATATAAAGTAAGTAT-AATAACA-TCGTAA-AAGGTACACG-AAAATGTTTC-AAATGTAACTCTGTATAAAAAGATATACACTGGTACAGGCA-TCTGCTTTCCTA-CTGCATTTTCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAAT-GAAT--CTTAT---GTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATCAAT-ACAGACATTGTGTTTTATGAT-ATTCATACAAA-TTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAAT-AAAATG--TACCAACCTGTTAACATGAAT-AACGTAG-C---GTGTT--AGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGAAGATCAACTTATTTAATGATGTTC-TCATTTTAAAAAAAAACC-TTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTG-ATCATTAC-AAATACTTCCTAG--GTATATGAGTCTGGGTTTTTAGATC-TTGGTAAG-TTTCTATCTTAAACACTATGACGC-AGCGT-CACGTTACCAGTAACTAATAAATACAC-TGGAGTTG-TCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTTGGGGGAA-GAAGGAAAATGTGTC-TACAGAGGACGCGA-TCCAAAAATTAAGGGACCTGGAAGAAA-TGTTAAATAAAAAATCAGAA--CATCTGGAACA--TAAAATTCATGAGGAAAC-GGAAAAGGC-TAGAAATGCTGGATTTCAAAAC-AAACGAGGTATGCTGATTAATT---TGCTTCTACTTTTA-G-TACA-TGTACT-ATTCATTCCTTTTCCCTTACC-AAGAAC-AA--CAGACG--------A-TA-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCA---A----A----T-----AC-A-TTTT---GA------------TC--AA-ACT--TTTAGATA-------TG-T----ATACA------AG------------G------------AA-------------TCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-TACCT-AAATGAACAG----T----A---G---AAAT-----CACAAAATT-TGTAAAAGT-----------------------------ACTGTTTGTGACTGAATAAA---TTTCTGTA--GCACAACTTAAAAATTAAACTG--CCAAAAGAAAACAAACTTAAGACAGTGACAAATAAC-AGCTATCAAAATACTCCTATCTACAGGT-ATTGGTGTACATAACCTACA-CAATACATCTATTATCAG-TACTGCTTATAGATTTAGGTATTGGTGTACATAACCTACATCAGTA-CTGCTTATAGATTTGACAAGTACAAAAACAAAGGT------AACATG------TA--TG-TGACTAGCCAATAAGAATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAA-GATCGT--GCTGGTCATGATCCCACCAAAGCATCAGAT-AGCACAGCACA-CAAACTATAAGATCAGGTGACAG-GT-AACCAAACTAATGTTG-TTTTCAAAATAAATGTTAGAGTAAT-ACTGGTTAAAGCATGTAACATAGCAAG---CAAACTATA-AACAAGATCAG-GTAACCAAACTAACCTTGCC-TACAAAATTACCGGCCCCAGCAGG-TAGCACAGCATACAACNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNAACCTCG-GCTGTATG
gi|10 : TCCATACCTAAACAA-AA--CAGAAGCTGTTAAGACTA-CA-A-TGAT-GT-TTAAAAGG-TATTTAT-TTGATCA---A----A----T-----AC-A-CGTT---GA------------TC--AA-CAA--TCCGGTCA-------TG-T----AT--A------AT------------G------------GA-----------------------------------AA-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA-C-TA----C---AAATA-T-----ACa
gi|11 : taatatccgtttccctctaaaCCGAAACTCTTGGAATGCGGGAATGGAATCCCTTAT-TGGTGCGTTATTCAAG-AACATGCGACGTTTATGGGTGTC-ATATATAAATCGCA---AT----TTTAACGATCAGTAGTAC-AAGT----AGTGTTTGAATA-ATTGAGATATGATACACAAATTA---GCAA-AAAAAAGACTACCctaaaactacatacac
gi|12 : CATCAGTTCAAGCATACACTC-T-----CACCATTCAATAATGTA-----TGGGAACCAACCACT---CCATCATACGTTGTGCATGTACAAAG---AGC-AGATAATGAAGGCCGT-CAAAAAGA----------GTATCACCCTA-----TCCTCTATTGTGCAT
gi|13 : attggatcattt---------------AT-GA-----------C-----------TACTAAAA----------TAT---G---------T-CA------CA-T----G------ACTA-A-TA----A---AAGTG-T-----ACacc
gi|13 : aa-------------TCAC---------------AT-GA-----------C-----------TAATAAAAGTGTACCTTCTGT---A-----ATAAC-TA------CA-T----GCA----ACTATC-TA----GTACAAACA-T-----GTATG-CACC--AAATGAACAA----T----cttctgtaataactacatgcaactatctagtacaaacatgtatgcaccaaatgaacaat
gi|14 : aaatgactactaaaatatgCCAGGTAATATGAATATGAATAAA-TAATGTGTAAAAGTAG-GGTCATAACCCACAAGTTGA-AAGGATCAT
gi|15 : tgtataaaactttTT---GA------------TC--AA-CAA--TCCAGACA-------TG-T----ATA-A------AA------------G------------GA---------------AC---------------A---A-----------C-----------TA-TAAAA-----------AA---A-----A--AT-CA------CA-TGACAG------ACTA-C-TA----G---A---A-T-----ACATA-CAC
gi|16 : cc---CAGACTAT--AATAAGCTCAG-GTATCCCAG------------TAC---GTTACCGGCCCCAGCAGG-TGACAAAGGATAGAAg
gi|17 : aTTCCTTACC-AAGCAC-AA--CAGAAG--------A-TA-TA-A-TTAT-GT-TGAAATTG-TATTact
gi|18 : cCAACCTC-GGTGATTCCGGAATCTATATCAAAC-CTCCGGCTGTATG
gi|2 : CCACTATATTTCTCA--TATT--GGTCTTTCTTT-GAAAACCTTTGATTCCCTTTCACTAACTAGG-AT-GATTGTGCCATGTTTGTATGCAA-TGG-TCTGGA-AGCGGAGAAT-AATCG-AAATGTTAGGCGTTGTACTCTGTAACATCTCGTA---TACAAAGGGGATTGTA---TACGA-TGCCCAAAAAGAAATG-TAACGATAGTACGAAAACTAAAACTAA-ACCCCT----CCAAAAGGTCAA-GTGGTGGTAATGGT----GTGTGGAGTCAAACGAGTGATAAAGCT-AATATCTTTCTTGCCGACCTTTGAAATCTTTAATCAATGGGGA-T-GGGAGG---GAGGTTTTTCTTCTATCACTACATGGAGTTCA-AT-ATGCATCACTTCAAGCTTACATCCA---AAGTATCA-----------AACATCTTTAC-TTACACGGTGA-CT------------GCATGTGTAAAACCTAACAA-ATA-TGAATGTTGTCCAAAAAGCAGGAAACCAAGC---------CTCCCTCCT-GATT--A-ATT-GCCTGTATT--AAAAGT-TATATAATGATAACAAATCCCAACAA-AACACGACATAATTTCTATCAGAACATGTCACAGTAA-CCGATCTTTGTTTG-ATCCA-TGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGG-ACACGAAAAATGTTTCAAAATGTAACTCTGT-TATAAAGATATACACTGGTACAGGCATTCTGC-TTCCTACCTGCA-TTCCGGACATTCCCTTCAATGTAATGAC-TTTAATAT-TTA-ATG-ACTT--GTGGGTCCGAA---CTTGGAATA-GGGAATG-AATT--TTATGTGGT-----ATTCAGAAAACATGC-ACGTT-ATGGGTGTCAATATATAA----CAGACATTGTGTTT-ATGAT-ATTCATACAAAATTACAAATATT-GAATATGTTGA-AGATTATTTACGA-TTAATGGCAATAAAAATG--TACCAACCTGTTAACATGAATAAACGTAGACACGGTCTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCAGAGATCAAC-TA-TTAATGATGTTCTTCATTTTTAAAAAAAACCGTTATGTATTGTA-AGT-TGCGAATTCGTTATAGAC-TGTGTATCATTACAAAATACTTCCTAGTAGTATG-GAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAAC-CTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGT-GAACCAATTTGGAGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAA-TAAGGGA-CTGGAAGAAATTGTTAAATTAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAG-AATGCTGGATTTCAAACCAAAACGA-GTATGCTGATTAA-T---TGCTTCTAC--TTA-GATACA-TGTACT-ATTCATTTC--TTTCCCTACC-AAGAACAAA--CAGACG--------A-TACCA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCA---A----A----T-----AC-ATTTTT---GA------------TCA-AA-ACAT-TTTAGATA-------TGAT----ATACA------AG------------G------------AA-------------TCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-T-----A---AAATATT-----ACATG-TACCTAAAATGAACAG----T----A---G----AAT-----CACAAAATTGT-AAAAAGTA---CT--------------G-----------GTTTGTGACTGAATAAAATTC-----TGTAGCACAACTTAAAAATTTTAAATTGCCAAAAGAAAACAAACTTAAGACAGTGACAAATAACAAGCTATCAAAATACTCCTATCTACAGGTAATTG-TGTA-ATAA-CTACACCAATACATCTATTATCAGTTACTGCTTATAGATTTAGGTATTGGTGTACATAACCTA-ATCAGTACTTGCTTATAA--TTGACAAGTACAAAAACAAAGGT------AACATG------TAATTGTTGACTAGCCAATAAG-ATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAAGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACTAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACT-GTTAAAGCATGTAACATAGCAAG---CAAAATATA-AACAAGTTCAGAGTAACCAAACTAACCTTTGCCTACAAAATTACCGGCCCCAGCAGGTTAGCACAGCATACAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATGa
gi|3 : tTCCTTCCC-AAACAC-AA--CAGAAG--------A-TA-TATACTTAT-GT-TGAAATTG-TATTTTA-TTGATCA---A----A----T-----AT-A--CTC---GA------------TC--AA-AAAATTTCAGACA-------TG-T----AGACA------AGATACAACTTAAAA------------GA-------------TCAC---------------AT-GATTGCAAAATGAC-----------TACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAA-A-------AGAT------C-AAATGATTAC----T----A---A---AAAT-----
gi|3 : cA-----------C-----------TAC--AAG----------TAT---A-----C--ATGTA------CA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACAA----TCAGCA---G---AAAT-----CACAA---TGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GTACCATTTAAAA-----------CC-AAGAAAGA-AGACTTGTGGCAGAGCCAAATAAT-ACCTATCAAAG-ACTC--ATGTACAGAT-GTTGATGTACATA-----CA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCA-TTCTCAGTATA--------------GTA---GCTTATACATCTGACAAGTACAAAAAGAAAGGT------AACATGAACATGTA--AG-TGACTAGCCAATACGAGTATCAACAAAatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaCAT------------TAC---AGTACCAGCCCCAGCAGG-TAACACCGCACAgcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgAGCAGGTAACACCGCA-----CATACTATGTAATGAGGTAAA-----CCAAA------------TCC---ATTAGCAGCCCCAGCAGG-TAACAGACTATAtactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccAGCAGGTAACAGACTAT--AA---GGTCAG-GTATCCCAG------------TAC---ATTACCGGCTCCAGCAGG-TAACACAGTATAGAAaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|4 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccAATTG-TATTTTA-TTGATCA---A----A----T-----AT-A--CTT---GA------------TCAAAA-AAA--T-CAGACA-------TG-T----AGAAA------AG------------GTACAACTTAAAAGA-------------TCAC---------------AT-GA-----------CTGCAAAATGACTACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAATA-----------G--ATC--AAATGATTAT----T----A---A---AAAT-----ac
gi|4 : ------------GA-------------TCAA---------------AT-GA-----------T-----------TATTAAAAATATACC---TAT---A-----ACTAC-CATGCGTACA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACAA----TC---ATCTG---AAAT-----CACAAAATTGTGAAAGAGTA---CTC--AAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--AAACCATTTAAAA-----------CC-atacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|4 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaataTTTAAAA-----------CC-A--GAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAAGT-GTTCATGTACA-----TACA--AATAAA-CTGTAATCAA-CA------------CCA-ATATC------CAT--CCT----CAGTA-TTGCCTA---ATTTGACAAGTACAAAAACAATGGTAACATGAACATG------TA--AG-TGACTAGTCAATACGAATATCAATCAAATCATTTGCAAAGGTGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|5 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaatagatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTTCCTCCTTCCC-AAGCAC-AA--CAGAAG--------A-TA-TA-C-TTAT-GT-TGAAATTG-TATTTTACTTGATCAAAAA----A----TTTCAGAC-A-TGTA---GAAAAGGTACAACTTA--AA-AGA--TC---ACA-------TG-A----CTGCA------AA------------GA-----------GACTACTAAAATATGTTAC---------------AT-GA-----------C-----------TGCCAAAA-----------AT---A-----G--AT-CA------AA-T----G------ATTA-C-TA----A---AAATA-T-----ACCTA-CAACT-ACATG
gi|5 : tg------------GA-------------TCAA---------------AT-GA-----------T-----------TACTAAAAA---------TAT---ACCTACA--AC-TA------CA-T----GTGTACAACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACAA----TC---A---GCTGAATT-----CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC--AAGAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAGGT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCA-TTTTCAGTATtgtacaactatctagtacaaaaatgtatgcaccaaatgaacaatcagctgaattcacaaaattgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggcaccatttaaaaccaagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaggtgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattttcagtattgc
gi|6 : tgcttcctccttcccaagcacaacagaagatatacttatgttgaaattgtattttacttgatcaaaaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaaaataTCCTTACC-AAGCCC-GA--GAGAAA--------C-TA-CG-T-TTAT-GT-TGAAATCA-TATTTTA-TAGATAA---A----AAAAATCACAGAC-A-TCTACAAAA------------TG--AA-CCA--TAGAGATAATATGACTG-TTAAAATATA---------------------------------GA-------------TCAC---------------AT-GA-----------C-----------TACTAAAAA---------TAT---ACCTAAA--AG-TA------AA-T----GCATTGAACTATC-TAGTCCA---AAAT--T-----GTAAG-CACC--AAATGAACAAACAGC----A---G---AAAT-----CACAAAATC-T--AACAGTA---TTC--AAAA-CATACAAATGTACGAACTGGTTGTGACTTCATAtgc
gi|7 : tccTAA-TGCGTGCGTCTTC--CTACAAT-CAGTGCACTCATT-ATGTCTCTTCCTTCACC-AAGCAC-ATGTCAGAAG--------A-TA-TA-A-TTATCGTGTGAAATTGGTATTTTA-TTGATCA---AGCGTA----A-----ACTA-TTT------------------TC--AAGACA--TTGGAAGA-------AG-A----ATACAGACTATAG------------C------------GA-------------TCACGCTTGATTGACAAAAAT-GA-----------C-----------TACCAAAA----------TA----A-----T--GT-CA------CATT----G------ACTG-CGGA----A---AAGTA-TAGATCACATGACACGT-AAA
gi|7 : -------------TCAC---------------ATTGA-----------C-----------TGCGGAAAAG--------TAT---A-----G--AT-CA------CA-T----G------AC-A-CGTA----A---ACATA-T-----ACCTA-CAcatatacctacaatct
gi|8 : taatgcgtgcgtcttcctacaatcagtgcactcattatgtctcttccttcaccaagcacatgtcagaagatataattatcgtgtgaaattggtattttattgatcaagcgtaaactattttcaagacattggaagaagaatacagactatagcgatcacgcttgattgacaaaaatgactaccaaaataatgCCAATCTTTGAAATATTGAATCAA------------AGGTTTGAGCT-CTACTTCTATAACCGTATGG-GATCACAT----CATCATTTCAAGCTTACATTCGTACATGTACCATTCATTAACGTAACA-CTTGGGGCAAAGC-GTGAACTAT--TGTTTTGTGTTTGG---AAATATAA-AAGATAATGAAAGTTGT-TAAAAAGAAAAGGACATGGTAAC-CCCTACTCGCTCCTCGATTCTACA-T-GCCTG--TT--AAATGTCTATatct
gi|9 : ttCTCCCTCTTTACCTAAATAC-AA--CAGAAG--------ATTA-CA-A-TGAT-GT-TGGATATG-CATTTTA-TTGAT-G---A----A----T-----AC-A-CTTT---GA------------TA--AA-TCA--TCCAGTCA-------TG-T----AT------------------------------------GA-------------TAAA---------------A---A-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA----A----A---ACAT--T-----A------AGCT-AAA--AACTA----T----C---C---AAATATTTGTATCTAATTGTAAAAGAATATACTTCCTCAAATCATAGGAATGTAg
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 11 1 1 1 1 1 1 1 1 1 11 22222 222 1 1 1 1 2222 1 1 2222 11 1 1 1 1111 1 1 1 11111 33333333333333333333333333333333333333333333333333333333333 222 1 1 555555555555555555555555555 1 33 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 2 33 22 1 2 2222 1 1 1 2 1 22 1 222 1 11 1 1 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 11 1 1 1 1 1 22222 222222 1 1 11111111 333333333333333333333333333333333333333333333333333333333 11111 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 222222 222222222 11 33333333333333333 11111 111111111 222222222 11 6666666666666666 1 2 22 44444 22 11 22 555555555555555555555555 11 555555 111 1 1 11 1 1 1 1 1 1 1 11111 111 666666666666 222 1 1 3333333
lowQualScore : 88 88 5 1 5 5 5 5 5 5 5 5 88 77777 111 5 5 5 5 4444 5 5 3333 88 5 5 5 7 7777 3 6 2 3 3 66666 0 22222222222222222222222222222222222222222222222222222222222 000 99 2 99 5 1 5 111111111111111111111111111 5 55 2 3 3 7 88 6 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 5 5 88 333 3 3 66 00 6 7 3 3 7 3333 6 6 3 0 3 0 7 2 7 3 7 3 7 00 7 5 111 5 1 88 5 5 5 1 5 5 5 5 5 5 88 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 1 77 88 5 5 5 1 5 5 77777 555555 7 3 0 2 7 9999 8 4 66 66666666 4 4 4 555 4 4 4 4 888888888888888888888888888888888888888888888888888888888 4 1 00000 888888 66 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 2 777777 2 5555 444444 333333333 444 444 77777 3 99 22222222222222222 44444 4 6 666666666 5 0 1 1 888888888 11 3333333333333333 5 1 8 0 55 8 3 44444 88 0 00 1 8 11 1 555555555555555555555555 77 8888 777777 444 0 3 0 3 22 6 6 2 88 5 5 5 5 5 5 5 77777 1 777 3 8 99 1 555555555555 333 6 1 0 3 4444444
lowQualScore : .. .. . . . . . . . . . . .. ..... ... . . . . .... . . .... .. . . . . .... . . . . . ..... . ........................................................... ... .. . .. . . . ........................... . .. . . . . .. . . . . . . . . . . . . . . . . . . . . . . . . . . . .. ... . . .. .. . . . . . .... . . . . . . . . . . . . . .. . . ... . . .. . . . . . . . . . . .. . . . . . . . . . . . . . . . . . .. .. . . . . . . ..... ...... . . . . . .... . . .. ........ . . . ... . . . . ......................................................... . . ..... ...... .. ................................................................................................................................ . ...... . .... ...... ......... ... ... ..... . .. ................. ..... . . ......... . . . . ......... .. ................ . . . . .. . . ..... .. . .. . . .. . ........................ .. .... ...... ... . . . . .. . . . .. . . . . . . . ..... . ... . . .. . ............ ... . . . . .......
lowQualScore : 55 55 5 0 5 0 0 5 0 5 5 5 00 55555 555 5 5 0 5 0000 0 0 5555 00 5 5 0 3 3333 3 7 0 3 2 00000 2 22222222222222222222222222222222222222222222222222222222222 000 00 5 88 5 0 0 888888888888888888888888888 0 55 5 2 3 3 33 7 5 0 5 5 0 0 5 5 5 5 5 0 5 5 5 5 5 0 5 5 0 5 5 0 5 5 00 333 3 3 77 77 7 3 3 7 3 3333 7 7 3 7 3 7 3 0 3 7 3 3 3 77 3 5 000 0 0 55 5 5 5 0 0 5 0 5 5 5 55 5 5 0 5 5 5 5 5 0 0 0 5 5 5 0 5 0 55 55 0 0 5 0 5 0 77777 333333 3 3 0 5 0 4444 9 4 11 11111111 4 4 4 444 4 4 0 4 777777777777777777777777777777777777777777777777777777777 0 0 11111 777777 44 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 222222 5 3333 777777 444444444 444 666 11111 3 55 11111111111111111 33333 3 6 000000000 7 7 4 5 000000000 00 1111111111111111 0 4 0 4 44 0 8 22222 00 6 88 4 0 00 0 111111111111111111111111 00 0000 555555 888 0 2 8 2 22 7 7 0 00 5 0 5 5 5 0 0 22222 4 666 8 0 00 0 888888888888 333 7 0 7 3 3333333
consensus : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAGGTAGC-CCCTACTC-CTCCTCGATT-TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACGTT-ATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATATT-GAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTCT----CCTTACC-AAGCAC-A--ACAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATT-GTATTTTA-TTGATCAA----A-----T-----AC-A-TCT------TGA------------TC--A-------A-ANA--TCCAGACATG-T----ATACA------AG------------G------------GA-------------TCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACAA----TC---A---G---AAAT-----CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCATATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATGAACATGTA--NG-TGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACAAGNTCAG-GTAA-CCAAA------------TAC---ATTACCGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
Reference ( family-1450 ) : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCAATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACTAT--TGC-TTGTGCATGTGCAAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAGGTANC-CCCTACTC-CTCCTCGATT-TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATGGAATCC-TTAT-TGGTGCGTTATTCAAGAAACATGC-ACGTTTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATATTTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTTT----CCTTACC-AAGCAC-A--ACAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATT-GTATTTTA-TTGATCAA----A-----T-----AC-A-TCT------TGA------------TC--A-------A-ANA--TCCAGACATG-T----ATACA------AG------------G------------GA-------------TCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACAA----T----A---G---AAAT-----CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCNTATANATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGT------AACATGTA--NG-TGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACAAGNTCAG-GTAN-CCNAA------------TAC---ATTACCGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
gi|1 : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTGAATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGT-GTACTCTGTAACATC--GTATTTTA-AAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTAC-AAAACTAAAACTAATACCCCTTTTGCCAAAAG-TCAAGGTGGTGGTAATGGTTTGGGTGTGG--TCAA-CGAGTGATAAAGCTAAATATCTTTCTC-CCGACCTTTGAAATCTTTAATCG-TGGGGAGTGGGGAGGGAGGTT-TTCTTCTATCACTACATGG-GTTCAATGATT-CATCACTTCAAGCTTACATCCA-A-A-GTATC------TAA----ACACTTTACTTTACACG-TGAAC-----------ATGCATGT---AAACCTAACAAAATA-TGAATGTTGTCCAAAAAGCGAGGAACCAG--AGC-TCC--CTT--TCCT-GATT--ACATTCGCCTGTATTTAAAAAGTCTATATAATGATAACAA-TCCCAACAACAAC-CGACATA-TTTCTATCAGAACATGTCACA-TAAGCCGATCTTTGTTTGTATCCATTGACCA-TA-TATAAAGTAAGTATAA-TAACA-TCGTAA-AAGGTACACGAAAA-TGTTTCAAA-TGTAACTCTGTATAAAAAGATATACACTGGTACAGGCAT-CTGCTTTCCTAC-TGCATTTTCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT---GTGCGTTATTCAAGAAACATGC-ACGTT-ATGGGTGTCAATATATCAAT-ACAGACATTGTGTTTTATGAT-ATTCATACAAA-TTACAAATATT-GAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAA-TGTACCAACCTGTTAACATGAATAA-CGTAG---CG-TGTT--AGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGAAGATCAACTTATTTAATGATGTTCT-CATTTTAAAAAAAAACC-TTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTG-ATCATTACAAA-TACTTCCTAG--GTATATGAGTCTGGGTTTTTAGATCTT-GGTAAG-TTTCTATCTTAAACACTATGACGCA-GCGT-CACGTTACCAGTAACTAATAAATACACT-GGAGTTGT-CGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTTGGGGGAAG-AAGGAAAATGTGTCT-ACAGAGGACGCGAT-CCAAAAATTAAGGGACCTGGAAGAAAT-GTTAAATAAAAAATCAGAAC--ATCTGGAACAT--AAAATTCATGAGGAAACGGA-AAAGGC-TAGAAATGCTGGATTTCAAAACAAA-CGAGGTATGCTGATTAAT---TTGCTTCTACTTTTA-G-TACA-TGTACT-ATTCATTCCTTTTC----CCTTACC-AAGAAC-A--ACAGACG--------A-T-A-CA-A-TTAT-GT-TGAAATT-GTATTTTA-TTGATCAA----A-----T-----AC-A-TTT------TGA------------TC--A-------A-ACT--TTTAGATATG-T----ATACA------AG------------G------------AA-------------TCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-TACCT-AAATGAACAG----T----A---G---AAAT-----CACAAAATT-TGTAAAAGT-----------------------------ACTGTTTGTGACTGAATAAA---TTTCTGTA--GCACAACTTAAAAATTAAACTG--CCAAAAGAAAACAAACTTAAGACAGTGACAAATAAC-AGCTATCAAAATACTCCTATCTACAGGT-ATTGGTGTACATAACCTACA-CAATACATCTATTATCAG-TACTGCTTATAGATTTAGGTATTGGTGTACATAACCTACATCAGTA-CTGCTTATAGATTTGACAAGTACAAAAACAAAGGT------AACATGTA--TG-TGACTAGCCAATAAGAATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAA-GATCGT--GCTGGTCATGATCCCACCAAAGCATCAGAT-AGCACAGCACA-CAAACTATAAGATCAGGTGACAG-GT-AACCAAACTAATGTTG-TTTTCAAAATAAATGTTAGAGTAAT-ACTGGTTAAAGCATGTAACATAGCAAG---CAAACTATAAACAAGATCAG-GTAA-CCAAACTAACCTTGCC-TACAAAATTACCGGCCCCAGCAGG-TAGCACAGCATACAACNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNAACCTCG-GCTGTATG
gi|10 : TAAT-ATCCGTTTCCCTCTAAATCCATACCTAAACAA-A--ACAGAAGCTGTTAAGACT-A-CA-A-TGAT-GT-TTAAAAG-GTATTTAT-TTGATCAA----A-----T-----AC-A-CGT------TGA------------TC--A-------A-CAA--TCCGGTCATG-T----AT--A------AT------------G------------GA-----------------------------------AA-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA-C-TA----C---AAATA-T-----ACa
gi|11 : CCGAAACTCTTGGAATGCGGGAATGGAATCCCTTAT-TGGTGCGTTATTCAAG-AACATGCGACGTTTATGGGTGTC-ATATATAAATCGCA---ATT---TTA-ACGATCAGTAGTAC-AAGT----AGTGTTTGAATA-ATTGAGATATGATACACAAATTA---GCAAAAAAAActaaaactacatacac
gi|12 : ATT--T-CATCAGTTCAAGCATACACTC-T-----CACCATTCAATAATGTA----TGGGAACCAACCACT---CCATCATACGTTGTGCATGTACAAAG---AGCA-GATAATGAAGGCCGT-CAAAAAG----------AGTATCACCCTA-----TCCTCTATTGTGCATgactacc
gi|13 : attggatc---------------AT-GA-----------C-----------TACTAAAA----------TAT---G---------T-CA------CA-T----G------ACTA-A-TA----A---AAGTG-T-----ACacc
gi|13 : aa-------------TCAC---------------AT-GA-----------C-----------TAATAAAAGTGTACCTTCTGT---A-----ATAAC-TA------CA-T----GCA----ACTATC-TA----GTACAAACA-T-----GTATG-CACC--AAATGAACAA----T----cttctgtaataactacatgcaactatctagtacaaacatgtatgcaccaaatgaacaat
gi|14 : aaatgactactaaaatatgCCAGGTAATATGAATATGAATAAA-TAATGTGTAAAAGTAG-GGTCATAACCCACAAGTTGA-AAGGATCAT
gi|15 : tgtataaaactttCT------TGA------------TC--A-------A-CAA--TCCAGACATG-T----ATA-A------AA------------G------------GA---------------AC---------------A---A-----------C-----------TA-TAAAA-----------AA---A-----A--AT-CA------CA-TGACAG------ACTA-C-TA----G---A---A-T-----ACATA-CAC
gi|16 : c---CAGACTATAA-TAAGCTCAG-GTAT-CCCAG------------TAC---GTTACCGGCCCCAGCAGG-TGACAAAGGATAGAAg
gi|17 : aTT----CCTTACC-AAGCAC-A--ACAGAAG--------A-T-A-TA-A-TTAT-GT-TGAAATT-GTATTact
gi|18 : cCAACCTC-GGTGATTCCGGAATCTATATCAAAC-CTCCGGCTGTATG
gi|2 : CCACTATATTTCTCA--TATT--GGTCTTTCTTT-GAAAACCTTTGATTCCCTTTCACTAACTAGGA-TG-ATTGTGCCATGTTTGTATGCAA-TGGT-CTGGA-AGCGGAGAATAA-TCGAAA-TGTTAGGCGTTGTACTCTGTAACATCTCGTAT---ACAAAGGGGATTGTAT---ACGAT-GCCCAAAAAGAAATGT-AACGATAGTACGAAAACTAAAACTAA-ACCCCT----CCAAAAGGTCAAG-TGGTGGTAATGGT----GTGTGGAGTCAAACGAGTGATAAAGCTAA-TATCTTTCTTGCCGACCTTTGAAATCTTTAATCAATGGGGA-TGGG-AGGGAGGTTTTTCTTCTATCACTACATGGAGTTCAATA--TGCATCACTTCAAGCTTACATCCA-A-A-GTATCA------AACAT----CTTTAC-TTACACGGTGA---------C-T---GCATGTGTAAAACCTAACAA-ATA-TGAATGTTGTCCAAAAAGCAGGAAACCA---AGC-CTC----C-CTCCT-GATT--A-ATT-GCCTGTATT--AAAAGT-TATATAATGATAACAAATCCCAACAA-AACACGACATAATTTCTATCAGAACATGTCACAGTAA-CCGATCTTTGTTTG-ATCCAT-GACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGG-ACACGAAAAATGTTTCAAAATGTAACTCTGT-TATAAAGATATACACTGGTACAGGCATTCTGCTT-CCTACCTGCATT-CCGGACATTCCCTTCAATGTAATGACTTT-AATAT-TTA-ATG-ACTT--GTGGGTCCGAA---CTTGGAATA-GGGAATG-AATT--TTATGTGGT-----ATTCAGAAAACATGC-ACGTT-ATGGGTGTCAATATATAA----CAGACATTGTGTTT-ATGAT-ATTCATACAAAATTACAAATATT-GAATATGTTGA-AGATTATTTACG-ATTAATGGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTCTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCAGAGATCAAC-TA-TTAATGATGTTCTTCATTTTTAAAAAAAACCGTTATGTATTGTA-AGT-TGCGAATTCGTTATAGAC-TGTGTATCATTACAAAATACTTCCTAGTAGTATG-GAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAAC-CTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGT-GAACCAATTTGGAGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAA-TAAGGGA-CTGGAAGAAATTGTTAAATTAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAG-AATGCTGGATTTCAAACCAAAACGA-GTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATT--TCTTT----CCCTACC-AAGAACAA--ACAGACG--------A-T-ACCA-A-TTAT-GT-TGAAATT-GTATTTTA-TTGATCAA----A-----T-----AC-ATTTT------TGA------------TCA-A-------A-ACAT-TTTAGATATGAT----ATACA------AG------------G------------AA-------------TCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-T-----A---AAATATT-----ACATG-TACCTAAAATGAACAG----T----A---G----AAT-----CACAAAATTGT-AAAAAGTA---CT--------------G-----------GTTTGTGACTGAATAAAATTC-----TGTAGCACAACTTAAAAATTTTAAATTGCCAAAAGAAAACAAACTTAAGACAGTGACAAATAACAAGCTATCAAAATACTCCTATCTACAGGTAATTG-TGTA-ATAA-CTACACCAATACATCTATTATCAGTTACTGCTTATAGATTTAGGTATTGGTGTACATAACCTA-ATCAGTACTTGCTTATAA--TTGACAAGTACAAAAACAAAGGT------AACATGTAATTGTTGACTAGCCAATAAG-ATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAAGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACTAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACT-GTTAAAGCATGTAACATAGCAAG---CAAAATATAAACAAGTTCAGAGTAA-CCAAACTAACCTTTGCCTACAAAATTACCGGCCCCAGCAGGTTAGCACAGCATACAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATGa
gi|3 : tT----CCTTCCC-AAACAC-A--ACAGAAG--------A-T-A-TATACTTAT-GT-TGAAATT-GTATTTTA-TTGATCAA----A-----T-----AT-A--CT------CGA------------TC--A-------A-AAAATTTCAGACATG-T----AGACA------AGATACAACTTAAAA------------GA-------------TCAC---------------AT-GATTGCAAAATGAC-----------TACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAA
gi|3 : cA-----------C-----------TAC--AAG----------TAT---A-----C--ATGTA------CA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACAA----TCAGCA---G---AAAT-----CACAA---TGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GTACCATTTAAAA-----------CC--AAGAAAGAAGACTTGTGGCAGAGCCAAATAAT-ACCTATCAAAG-ACTC--ATGTACAGAT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCA-TTCTCAGTAT--------------AGTA---GCTTATACATCTGACAAGTACAAAAAGAAAGGTAACATGAACATGTA--AG-TGACTAGCCAATACGAGTATCAACAAAaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctaca------------TAC---AGTACCAGCCCCAGCAGG-TAACACCGCACATAgcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcatAGCAGGTAACACCGCA-----CATACTATG--TAA--TGAG-GTAAACCAAA------------TCC---ATTAGCAGCCCCAGCAGG-TAACActatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccAGCAGGTAACAGACTATAA----GGTCAG-GTAT-CCCAG------------TAC---ATTACCGGCTCCAGCAGG-TAACACAGTATAGAAgactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|4 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccAATT-GTATTTTA-TTGATCAA----A-----T-----AT-A--CT------TGA------------TCAAA-------A-AAA--T-CAGACATG-T----AGAAA------AG------------GTACAACTTAAAAGA-------------TCAC---------------AT-GA-----------CTGCAAAATGACTACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAATA-ac
gi|4 : ------------GA-------------TCAA---------------AT-GA-----------T-----------TATTAAAAATATACC---TAT---A-----ACTAC-CATGCGTACA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACAA----TC---ATCTG---AAAT-----CACAAAATTGTGAAAGAGTA---CTC--AAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--AAACCATTTAAAA-----------CC-gatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|4 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaataTTTAAAA-----------CC-A--GAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAAGT-GTTCATGTACA-----TACA--AATAAA-CTGTAATCAA-CACCA-ATATCCATCC------------------------TCAGTA-TTGCCTA---ATTTGACAAGTACAAAAACAATGGTAACATGAACATGTA--AG-TGACTAGTCAATACGAATATCAATCAAATCATTTGCAAAGGTGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|5 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaatagatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTTCCT----CCTTCCC-AAGCAC-A--ACAGAAG--------A-T-A-TA-C-TTAT-GT-TGAAATT-GTATTTTACTTGATCAA----AAAATTTCAG--AC-A-TGT------AGAAAAGGTACAACTTA--A-------A-AGA--TC---ACATG-A----CTGCA------AA------------GA-----------GACTACTAAAATATGTTAC---------------AT-GA-----------C-----------TGCCAAAA-----------AT---A-----G--AT-CA------AA-T----G------ATTA-C-TA----A---AAATA-T-----ACCTA-CAACT-ACATG
gi|5 : tg------------GA-------------TCAA---------------AT-GA-----------T-----------TACTAAAAA---------TAT---ACCTACA--AC-TA------CA-T----GTGTACAACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACAA----TC---A---GCTGAATT-----CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC--AAGAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAGGT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCATTT-TCAGTATtgtacaactatctagtacaaaaatgtatgcaccaaatgaacaatcagctgaattcacaaaattgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggcaccatttaaaaccaagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaggtgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattttcagtattgc
gi|6 : tgcttcctccttcccaagcacaacagaagatatacttatgttgaaattgtattttacttgatcaaaaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaaaataT----CCTTACC-AAGCCC-G--AGAGAAA--------C-T-A-CG-T-TTAT-GT-TGAAATC-ATATTTTA-TAGATAAA----AAAAA-TCACAGAC-A-TCTACAAAATGAA-----------CC--ATAGAGATA-ATA--T---GAC-TG-TTAAAATATA---------------------------------GA-------------TCAC---------------AT-GA-----------C-----------TACTAAAAA---------TAT---ACCTAAA--AG-TA------AA-T----GCATTGAACTATC-TAGTCCA---AAAT--T-----GTAAG-CACC--AAATGAACAAACAGC----A---G---AAAT-----CACAAAATC-T--AACAGTA---TTC--AAAA-CATACAAATGTACGAACTGGTTGTGACTTCATAtgc
gi|7 : tccTAATGCGT-GCGTCTTCCT--ACAAT-CAGTGCACTCATT-ATGTCTCTTC----CTTCACC-AAGCAC-ATGTCAGAAG--------A-T-A-TA-A-TTATCGTGTGAAATTGGTATTTTA-TTGATCAAGCGTA-----A-----ACTA-TTT---------------------TC--A-------AGACA--TTGGAAGAAG-A----ATACAGACTATAG------------C------------GA-------------TCACGCTTGATTGACAAAAAT-GA-----------C-----------TACCAAAA----------TA----A-----T--GT-CA------CATT----G------ACTG-CGGA----A---AAGTA-TAGATCACATGACACGT-AAA
gi|7 : -------------TCAC---------------ATTGA-----------C-----------TGCGGAAAAG--------TAT---A-----G--AT-CA------CA-T----G------AC-A-CGTA----A---ACATA-T-----ACCTA-CAcatatacctacaatct
gi|8 : taatgcgtgcgtcttcctacaatcagtgcactcattatgtctcttccttcaccaagcacatgtcagaagatataattatcgtgtgaaattggtattttattgatcaagcgtaaactattttcaagacattggaagaagaatacagactatagcgatcacgcttgattgacaaaaatgactaccaaaataatgCCAATCTTTGAAATATTGAATCAAAGG----TTTG-AG-----CTCTACTTCTATAACCGTATGG-GATCA-CA--T-CATCATTTCAAGCTTACATTCGTACATGTACCATTCATTAACGTAACACTTGGGGCAAAGC-GTGAACTAT--TGT-TT-TGTGTTTG-GAAATATAA-AAGATAATGAAAGTTGT-TAAAAAGAAAAGGACATGGTAAC-CCCTACTCGCTCCTCGATTCTACA-T-GCCTG--TT--AAATGTCTATatct
gi|9 : ttCTCCCT----CTTTACCTAAATAC-A--ACAGAAG--------A-TTA-CA-A-TGAT-GT-TGGATAT-GCATTTTA-TTGAT-GA----A-----T-----AC-A-CTT------TGA------------TA--A-------A-TCA--TCCAGTCATG-T----AT------------------------------------GA-------------TAAA---------------A---A-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA----A----A---ACAT--T-----A------AGCT-AAA--AACTA----T----C---C---AAATATTTGTATCTAATTGTAAAAGAATATACTTCCTCAAATCATAGGAATGTAg
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 11 1 1 1 1 1 1 1 1 1 11 22222 222 1 1 1 1 2222 1 1 2222 11 1 1 1 1111 1 1 1 11111 33333333333333333333333333333333333333333333333333333333333 222 1 1 222 4444444 2 33333333 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 11 22 1 1 2222 1 1 1 1 1 22 1 222 1 11 1 1 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 11 1 1 1 1 1 22222 222222 1 1 11111111 111111111111111 1111111111 11111111111111111 555555555555555555555555555555555555 111111111111111 11111111111111111111111 4444444444444444444444444 222222 222222222 11 111111111111 111 111111111 222222222 11 6666666666666666 1 2 22 44444 22 11 22 555555555555555555555555 11 1 1 11 1 1 1 1 1 1 1 11111 2222222 666666666666666666 11111 1 1 3333333
lowQualScore : 88 88 5 1 5 5 5 5 5 5 5 5 88 77777 111 5 5 5 5 4444 5 5 3333 88 5 5 5 88 7777 3 6 2 3 3 66666 0 22222222222222222222222222222222222222222222222222222222222 2 333 99 2 99 5 1 5 0 888 3333333 3 77777777 7 88 6 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 5 5 88 333 3 3 88 00 6 7 3 3 7 3333 6 6 3 0 3 0 7 2 7 3 7 3 7 00 7 5 111 5 1 88 5 5 5 1 5 5 5 5 5 5 88 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 1 77 88 5 5 5 1 5 5 77777 555555 7 3 0 2 7 0 9999 4 8 4 66 66666666 4 4 4 555 4 4 4 4 666666666666666 5 5555555555 4 66666666666666666 8 4 9999 444444444444444444444444444444444444 666666666666666 2 55555555555555555555555 0 4444444444444444444444444 2 777777 2 5555 444444 333333333 444 444 77777 3 99 888 999999999999 5 000 4 6 666666666 5 0 1 1 888888888 11 3333333333333333 5 1 8 0 55 8 3 44444 88 0 00 1 8 11 555555555555555555555555 77 8888 3 0 3 77 3 0 3 22 6 6 2 88 5 5 5 5 5 5 5 77777 1 0000000 3 6 6 6 777777777777777777 66666 6 1 0 3 4444444
lowQualScore : .. .. . . . . . . . . . . .. ..... ... . . . . .... . . .... .. . . . .. .... . . . . . ..... . ........................................................... . ... .. . .. . . . . ... ....... . ........ . .. . . . . . . . . . . . . . . . . . . . . . . . . . . . .. ... . . .. .. . . . . . .... . . . . . . . . . . . . . .. . . ... . . .. . . . . . . . . . . .. . . . . . . . . . . . . . . . . . .. .. . . . . . . ..... ...... . . . . . . .... . . . .. ........ . . . ... . . . . ............... . .......... . ................. . . .... .................................... ............... . ....................... . ......................... . ...... . .... ...... ......... ... ... ..... . .. ... ............ . ... . . ......... . . . . ......... .. ................ . . . . .. . . ..... .. . .. . . .. ........................ .. .... . . . .. . . . .. . . . .. . . . . . . . ..... . ....... . . . . .................. ..... . . . . .......
lowQualScore : 55 55 5 0 5 0 0 5 0 5 5 5 00 55555 555 5 5 0 5 0000 0 0 5555 00 5 5 0 00 3333 3 7 0 3 2 00000 2 00000000000000000000000000000000000000000000000000000000000 0 555 00 5 88 5 0 0 7 777 3333333 3 33333333 3 33 7 5 0 5 5 0 0 5 5 5 5 5 0 5 5 5 5 5 0 5 5 0 5 5 0 5 5 00 333 3 3 33 77 7 3 3 3 3 3333 7 7 3 7 3 7 3 0 3 3 3 3 3 77 3 5 000 0 0 55 5 5 5 0 0 5 0 5 5 5 55 5 5 0 5 5 5 5 5 0 0 0 5 5 5 0 5 0 55 55 0 0 5 0 5 0 77777 333333 3 3 0 5 0 2 4444 4 9 4 11 11111111 4 4 4 444 4 4 0 4 666666666666666 0 7777777777 4 11111111111111111 2 4 4444 777777777777777777777777777777777777 777777777777777 7 88888888888888888888888 4 4444444444444444444444444 5 222222 5 3333 777777 444444444 444 666 11111 3 55 888 777777777777 7 000 3 6 000000000 7 7 4 5 000000000 00 1111111111111111 0 4 0 4 44 0 8 22222 00 6 88 4 0 44 111111111111111111111111 00 0000 2 0 2 88 2 8 2 22 7 7 0 00 5 0 5 5 5 0 0 22222 4 0000000 3 7 7 7 777777777777777777 77777 7 0 7 3 3333333
consensus : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAG--AGCCCC--CTC-CTCCT-GATT--ACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TCT------TGA-TC--A-------A-ANA--TCCAGACATG-T----ATACA------AG------------G------------GATCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACA---AT---CA---G---AA-AT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCATATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACA----AGNT-CAG-GTAA-CCAAG------------TAC---ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
Reference ( family-1450 ) : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAGGTAGCCCCTACTC-CTCCTCGATT-TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TCT------TGA-TC--A-------A-ANA--TCCAGACATG-T----ATACA------AG------------G------------GATCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACA---AT---CA---G---AA-AT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCATATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTANGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACA----AGNT-CAG-GTAA-CCAAA------------TAC---ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
gi|1 : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTGAATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGT-GTACTCTGTAACATC--GTATTTTA-AAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTAC-AAAACTAAAACTAATACCCCTTTTGCCAAAAG-TCAAGGTGGTGGTAATGGTTTGGGTGTGG--TCAA-CGAGTGATAAAGCTAAATATCTTTCTC-CCGACCTTTGAAATCTTTAATCG-TGGGGAGTGGGGAGGGAGGTT-TTCTTCTATCACTACATGG-GTTCAATGATT-CATCACTTCAAGCTTACATCCA-A-A-GTATC------TAA----ACACTTTACTTTACACG-TGAAC-----------ATGCATGT---AAACCTAACAAAATA-TGAATGTTGTCCAAAAAGCGAGGAACCAG--AGCTCC--CTT--TCCT-GATT--ACATTCGCCTGTATTTAAAAAGTCTATATAATGATAACAA-TCCCAACAACAAC-CGACATA-TTTCTATCAGAACATGTCACA-TAAGCCGATCTTTGTTTGTATCCATTGACCA-TA-TATAAAGTAAGTATAA-TAACA-TCGTAA-AAGGTACACGAAAA-TGTTTCAAA-TGTAACTCTGTATAAAAAGATATACACTGGTACAGGCAT-CTGCTTTCCTAC-TGCATTTTCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT---GTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATCAAT-ACAGACATTGTGTTTTATGAT-ATTCATACAAA-TTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAA-TGTACCAACCTGTTAACATGAATAA-CGTAG---CG-TGTT--AGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGAAGATCAACTTATTTAATGATGTTCT-CATTTTAAAAAAAAACC-TTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTG-ATCATTACAAA-TACTTCCTAG--GTATATGAGTCTGGGTTTTTAGATCTT-GGTAAG-TTTCTATCTTAAACACTATGACGCA-GCGT-CACGTTACCAGTAACTAATAAATACACT-GGAGTTGT-CGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTTGGGGGAAG-AAGGAAAATGTGTCT-ACAGAGGACGCGAT-CCAAAAATTAAGGGACCTGGAAGAAAT-GTTAAATAAAAAATCAGAAC--ATCTGGAACAT--AAAATTCATGAGGAAACGGA-AAAGGC-TAGAAATGCTGGATTTCAAAACAAA-CGAGGTATGCTGATTAAT---TTGCTTCTACTTTTA-G-TACA-TGTACT-ATTCATTCCTTTTC----CCTT-ACC-AAGAAC-AA--CAGACG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TTT------TGA-TC--A-------A-ACT--TTTAGATATG-T----ATACA------AG------------G------------AATCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-TACCT-AAATGAACA---GT----A---G---AA-AT---CACAAAATT-TGTAAAAGT-----------------------------ACTGTTTGTGACTGAATAAA---TTTCTGTA--GCACAACTTAAAAATTAAACTG--CCAAAAGAAAACAAACTTAAGACAGTGACAAATAAC-AGCTATCAAAATACTCCTATCTACAGGT-ATTGGTGTACATAACCTACA-CAATACATCTATTATCAG-TACTGCTTATAGATTTAGGTATTGGTGTACATAACCTACATCAGTA-CTGCTTATAGATTTGACAAGTACAAAAACAAAGGT-------AACATGTATGTGACTAGCCAATAAGAATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAA-GATCGT--GCTGGTCATGATCCCACCAAAGCATCAGAT-AGCACAGCACA-CAAACTATAAGATCAGGTGACAG-GT-AACCAAACTAATGTTG-TTTTCAAAATAAATGTTAGAGTAAT-ACTGGTTAAAGCATGTAACATAGCAAG---CAAACTATAAACA----AGAT-CAG-GTAA-CCAAACTAACCTTGCC-TACAAAATTAC-----CGGCCCCAGCAGG-TAGCACAGCATACAACNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNAACCTCG-GCTGTATG
gi|10 : TAAT-ATCCGTTTCCCTCTAAATCCAT-ACCTAAACAA-AA--CAGAAGCTGTTAAGACT-A-CA-A-TGAT-GT-TTAAAAGG-TATTTAT-TTGATCAA----A----T-----AC-A-CGT------TGA-TC--A-------A-CAA--TCCGGTCATG-T----AT--A------AT------------G------------GA----------------------AA-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA-C-TA----C---AAATA-T-----ACa
gi|11 : CCGAAACTCTTGGAATGCGGGAATGGAATCCCTTAT-TGGTGCGTTATTCAAG-AACATGCGACGTTTATGGGTGTC-ATATATAAATCGCA---ATT---TTA-ACGATCAGTAGTAC-AAGT----AGTGTTTGAATA-ATTGAGATATGATACACAAATTA---GCAAAAAAAActaaaactacatacac
gi|12 : ATT--T-CATCAGTTCAAGCATACACTC-T-----CACCATTCAATAATGTA----TGGGAACCAACCACT---CCATCATACGTTGTGCATGTACAAAG---AGCA-GATAATGAAGGCCGT-CAAAAAGgactacc
gi|13 : attggatc---------------AT-GA-----------C-----------TACTAAAA----------TAT---G---------T-CA------CA-T----G------ACTA-A-TA----A---AAGTG-T-----ACagtatcaccctatcctctattgtgcatacc
gi|13 : aaTCAC---------------AT-GA-----------C-----------TAATAAAAGTGTACCTTCTGT---A-----ATAAC-TA------CA-T----GCA----ACTATC-TA----GTACAAACA-T-----GTATG-CACC--AAATGAACA---AT---cttctgtaataactacatgcaactatctagtacaaacatgtatgcaccaaatgaacaat
gi|14 : aaatgactactaaaatatgCCAGGTAATATGAATATGAATAAA-TAATGTGTAAAAGTAG-GGTCATAACCCACAAGTTGA-AAGGATCAT
gi|15 : tgtataaaactttCT------TGA-TC--A-------A-CAA--TCCAGACATG-T----ATA-A------AA------------G------------GA--AC---------------A---A-----------C-----------TA-TAAAA-----------AA---A-----A--AT-CA------CA-TGACAG------ACTA-C-TA----G---A---A-T-----ACATA-CAC
gi|16 : c---CAGACTATAA-TA----AGCT-CAG-GTAT-CCCAG------------TAC---GTTAC-----CGGCCCCAGCAGG-TGACAAAGGATAGAAg
gi|17 : aT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-TA-A-TTAT-GT-TGAAATTG-TATTact
gi|18 : ctCAACCTC-GGTGATTCCGGAATCTATATCAAAC-CTCCGGCTGTATG
gi|2 : CCACTATATTTCTCA--TATT--GGTCTTTCTTT-GAAAACCTTTGATTCCCTTTCACTAACTAGGA-TG-ATTGTGCCATGTTTGTATGCAA-TGGT-CTGGA-AGCGGAGAATAA-TCGAAA-TGTTAGGCGTTGTACTCTGTAACATCTCGTAT---ACAAAGGGGATTGTAT---ACGAT-GCCCAAAAAGAAATGT-AACGATAGTACGAAAACTAAAACTAA-ACCCCT----CCAAAAGGTCAAG-TGGTGGTAATGGT----GTGTGGAGTCAAACGAGTGATAAAGCTAA-TATCTTTCTTGCCGACCTTTGAAATCTTTAATCAATGGGGA-TGGG-AGGGAGGTTTTTCTTCTATCACTACATGGAGTTCAATA--TGCATCACTTCAAGCTTACATCCA-A-A-GTATCA------AACAT----CTTTAC-TTACACGGTGA---------C-T---GCATGTGTAAAACCTAACAA-ATA-TGAATGTTGTCCAAAAAGCAGGAAACCA---AGCCTC----C-CTCCT-GATT--A-ATT-GCCTGTATT--AAAAGT-TATATAATGATAACAAATCCCAACAA-AACACGACATAATTTCTATCAGAACATGTCACAGTAA-CCGATCTTTGTTTG-ATCCAT-GACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGG-ACACGAAAAATGTTTCAAAATGTAACTCTGT-TATAAAGATATACACTGGTACAGGCATTCTGCTT-CCTACCTGCATT-CCGGACATTCCCTTCAATGTAATGACTTT-AATAT-TTA-ATG-ACTT--GTGGGTCCGAA---CTTGGAATA-GGGAATG-AATT--TTATGTGGT-----ATTCAGAAAACATGC-ACG-TTATGGGTGTCAATATATAA----CAGACATTGTGTTT-ATGAT-ATTCATACAAAATTACAAATA-TTGAATATGTTGA-AGATTATTTACG-ATTAATGGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTCTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCAGAGATCAAC-TA-TTAATGATGTTCTTCATTTTTAAAAAAAACCGTTATGTATTGTA-AGT-TGCGAATTCGTTATAGAC-TGTGTATCATTACAAAATACTTCCTAGTAGTATG-GAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAAC-CTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGT-GAACCAATTTGGAGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAA-TAAGGGA-CTGGAAGAAATTGTTAAATTAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAG-AATGCTGGATTTCAAACCAAAACGA-GTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATT--TCTTT----CCCT-ACC-AAGAACAAA--CAGACG--------A-T-ACCA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-ATTTT------TGA-TCA-A-------A-ACAT-TTTAGATATGAT----ATACA------AG------------G------------AATCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-T-----A---AAATATT-----ACATG-TACCTAAAATGAACA---GT----A---G----A-AT---CACAAAATTGT-AAAAAGTA---CT--------------G-----------GTTTGTGACTGAATAAAATTC-----TGTAGCACAACTTAAAAATTTTAAATTGCCAAAAGAAAACAAACTTAAGACAGTGACAAATAACAAGCTATCAAAATACTCCTATCTACAGGTAATTG-TGTA-ATAA-CTACACCAATACATCTATTATCAGTTACTGCTTATAGATTTAGGTATTGGTGTACATAACCTA-ATCAGTACTTGCTTATAA--TTGACAAGTACAAAAACAAAGGTAACATGTAAT-TGT---TGACTAGCCAATAAG-ATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAAGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACTAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACT-GTTAAAGCATGTAACATAGCAAG---CAAAATATAAACA----AGTT-CAGAGTAA-CCAAACTAACCTTTGCCTACAAAATTAC-----CGGCCCCAGCAGGTTAGCACAGCATACAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATGa
gi|3 : tCT----CCTT-CCC-AAACAC-AA--CAGAAG--------A-T-A-TATACTTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AT-A--CT------CGA-TC--A-------A-AAAATTTCAGACATG-T----AGACA------AGATACAACTTAAAA------------GATCAC---------------AT-GATTGCAAAATGAC-----------TACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAA
gi|3 : TCAC---------------AT-GA-----------C-----------TGCCAAAA----------AA----A-----G--AT-CA------AA-T----G------ATTA-C-TA----A---AAATA-T-----ACCTA-CAACT-Aaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgA-----------C-----------TAC--AAG----------TAT---A-----C--ATGTA------CA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACA---ATCAGCA---G---AA-AT---CACAA---TGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GTACCATTTAAAA-----------CC--AAGAAAGAAGACTTGTGGCAGAGCCAAATAAT-ACCTATCAAAG-ACTC--ATGTACAGAT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCA-TTCTCAGTAT--------------AGTA---GCTTATACATCTGACAAGTACAAAAAGAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAGTATCAACAAAcaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaCTCTAAACACAAAAGATACAT-GTGA-ACAAG------------TGC---ATTACAGTACCAGCCCCAGCAGG-TAACACCGCACATAgcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtAGCAGGTAACACCGCA-----CATACTATG--TA----A--T-GAG-GTAAACCAAA------------TCC---ATTAG-----CAGCCCCAGCAGG-TAACActatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccAGCAGGTAACAGACTATAA--------GGT-CAG-GTAT-CCCAG------------TAC---ATTAC-----CGGCTCCAGCAGG-TAACACAGTATAGAAgactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|4 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccAATTG-TATTTTA-TTGATCAA----A----T-----AT-A--CT------TGA-TCAAA-------A-AAA--T-CAGACATG-T----AGAAA------AG------------GTACAACTTAAAAGATCAC---------------AT-GA-----------CTGCAAAATGACTACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAATA-ac
gi|4 : ------------GATCAA---------------AT-GA-----------T-----------TATTAAAAATATACC---TAT---A-----ACTAC-CATGCGTACA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACA---AT---CATCTG---AA-AT---CACAAAATTGTGAAAGAGTA---CTC--AAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--AAACCATTTAAAA-----------CC-gatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|4 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaataTTTAAAA-----------CC-A--GAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAAGT-GTTCATGTACA-----TACA--AATAAA-CTGTAATCAA-CACCA-ATATCCATCC------------------------TCAGTA-TTGCCTA---ATTTGACAAGTACAAAAACAATGGTAACATG-AACATGTAAGTGACTAGTCAATACGAATATCAATCAAATCATTTGCAAAGGTGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|5 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaatagatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTTCCT----CCTT-CCC-AAGCAC-AA--CAGAAG--------A-T-A-TA-C-TTAT-GT-TGAAATTG-TATTTTACTTGATCAA----A----
gi|5 : tg------------GATCAA---------------AT-GA-----------T-----------TACTAAAAA---------TAT---ACCTACA--AC-TA------CA-T----GTGTACAACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACA---AT---CA---GCTGAA-TT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC--AAGAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAGGT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCATTT-TCAGTATaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaaaatagatcaaatgattactaaaaatatacctacaactacatgtgtacaactatctagtacaaaaatgtatgcaccaaatgaacaatcagctgaattcacaaaattgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggcaccatttaaaaccaagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaggtgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattttcagtattgc
gi|6 : tgcttcctccttcccaagcacaacagaagatatacttatgttgaaattgtattttacttgatcaaaaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaaaataCT----CCTT-ACC-AAGCCC-GA--GAGAAA--------C-T-A-CG-T-TTAT-GT-TGAAATCA-TATTTTA-TAGATAAA----AAAAATCACAGAC-A-TCTACAAAATGAACC--ATAGAGATA-ATA--T---GAC-TG-TTAAAATATA---------------------------------GATCAC---------------AT-GA-----------C-----------TACTAAAAA---------TAT---ACCTAAA--AG-TA------AA-T----GCATTGAACTATC-TAGTCCA---AAAT--T-----GTAAG-CACC--AAATGAACAAACAG---CA---G---AA-AT---CACAAAATC-T--AACAGTA---TTC--AAAA-CATACAAATGTACGAACTGGTTGTGACTTCATAtgc
gi|7 : tcTAATGCGT-GCGTCTTCCT--ACAAT-CAGTGCACTCATT-ATGTCTCT-T----CCTTCACC-AAGCAC-ATGTCAGAAG--------A-T-A-TA-A-TTATCGTGTGAAATTGGTATTTTA-TTGATCAAGCGTA----A-----ACTA-TTT----------TC--A-------AGACA--TTGGAAGAAG-A----ATACAGACTATAG------------C------------GATCACGCTTGATTGACAAAAAT-GA-----------C-----------TACCAAAA----------TA----A-----T--GT-CA------CATT----G------ACTG-CGGA----A---AAGTA-TAGATCACATGACACGT-AAA
gi|7 : TCAC---------------ATTGA-----------C-----------TGCGGAAAAG--------TAT---A-----G--AT-CA------CA-T----G------AC-A-CGTA----A---ACATA-T-----ACCTA-CAcatatacctacaatct
gi|8 : taatgcgtgcgtcttcctacaatcagtgcactcattatgtctcttccttcaccaagcacatgtcagaagatataattatcgtgtgaaattggtattttattgatcaagcgtaaactattttcaagacattggaagaagaatacagactatagcgatcacgcttgattgacaaaaatgactaccaaaataatgCCAATCTTTGAAATATTGAATCAAAGG----TTTG-AG-----CTCTACTTCTATAACCGTATGG-GATCA-CA--T-CATCATTTCAAGCTTACATTCGTACATGTACCATTCATTAACGTAACACTTGGGGCAAAGC-GTGAACTAT--TGT-TT-TGTGTTTG-GAAATATAA-AAGATAATGAAAGTTGT-TAAAAAGAAAAGGACATGGTAACCCCTACTCGCTCCTCGATTCTACA-T-GCCTG--TT--AAATGTCTATatct
gi|9 : ttCTCCCT----CTTT-ACCTAAATAC-AA--CAGAAG--------A-TTA-CA-A-TGAT-GT-TGGATATG-CATTTTA-TTGAT-GA----A----T-----AC-A-CTT------TGA-TA--A-------A-TCA--TCCAGTCATG-T----AT------------------------------------GATAAA---------------A---A-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA----A----A---ACAT--T-----A------AGCT-AAA--AACT---AT---CC---A---AATATTTGTATCTAATTGTAAAAGAATATACTTCCTCAAATCATAGGAATGTAg
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 11 1 1 1 1 1 1 1 1 1 11 22222 222 1 1 1 1 2222 1 1 2222 11 1 1 1 1111 1 1 1 11111 33333333333333333333333333333333333333333333333333333333333 222 1 1 222 3333333 1 11 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 11 22 1 1 2222 1 1 1 1 1 22 1 222 1 11 1 1 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 11 1 1 1 1 1 22222 222222 1 1 11111111 111111111111111 1111111111 11111111111111111 555555555555555555555555555555555555 111111111111111 11111111111111111111111 4444444444444444444444444 222222 222222222 11 111111111111 111 111111111 222222222 11 6666666666666666 1 2 22 44444 22 11 22 555555555555555555555555 11 1 1 11 1 1 1 1 1 1 1 11111 2222222 666666666666666666 11111 1 1 3333333
lowQualScore : 88 88 5 1 5 5 5 5 5 5 5 5 88 77777 111 5 5 5 5 4444 5 5 3333 88 5 5 5 88 7777 3 6 2 3 3 66666 0 22222222222222222222222222222222222222222222222222222222222 2 333 99 2 99 5 1 5 0 555 9999999 3 88 6 7 3 7 88 6 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 5 5 88 333 3 3 88 00 6 7 3 3 7 3333 6 6 3 0 3 0 7 2 7 3 7 3 7 00 7 5 111 5 1 88 5 5 5 1 5 5 5 5 5 5 88 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 1 77 88 5 5 5 1 5 5 77777 555555 7 3 0 2 7 0 9999 4 8 4 66 66666666 4 4 4 555 4 4 4 4 666666666666666 5 5555555555 4 66666666666666666 8 4 9999 444444444444444444444444444444444444 666666666666666 2 55555555555555555555555 0 4444444444444444444444444 2 777777 2 5555 444444 333333333 444 444 77777 3 99 888 999999999999 5 000 4 6 666666666 5 0 1 1 888888888 11 3333333333333333 5 1 8 0 55 8 3 44444 88 0 00 1 8 11 555555555555555555555555 77 8888 3 0 3 66 3 0 3 22 6 6 2 88 5 5 5 5 5 5 5 77777 1 0000000 3 6 6 6 777777777777777777 66666 6 1 0 3 4444444
lowQualScore : .. .. . . . . . . . . . . .. ..... ... . . . . .... . . .... .. . . . .. .... . . . . . ..... . ........................................................... . ... .. . .. . . . . ... ....... . .. . . . . .. . . . . . . . . . . . . . . . . . . . . . . . . . . . .. ... . . .. .. . . . . . .... . . . . . . . . . . . . . .. . . ... . . .. . . . . . . . . . . .. . . . . . . . . . . . . . . . . . .. .. . . . . . . ..... ...... . . . . . . .... . . . .. ........ . . . ... . . . . ............... . .......... . ................. . . .... .................................... ............... . ....................... . ......................... . ...... . .... ...... ......... ... ... ..... . .. ... ............ . ... . . ......... . . . . ......... .. ................ . . . . .. . . ..... .. . .. . . .. ........................ .. .... . . . .. . . . .. . . . .. . . . . . . . ..... . ....... . . . . .................. ..... . . . . .......
lowQualScore : 55 55 5 0 5 0 0 5 0 5 5 5 00 55555 555 5 5 0 5 0000 0 0 5555 00 5 5 0 00 3333 3 7 0 3 2 00000 2 00000000000000000000000000000000000000000000000000000000000 0 555 00 5 88 5 0 0 7 000 3333333 3 33 7 3 3 3 33 7 5 0 5 5 0 0 5 5 5 5 5 0 5 5 5 5 5 0 5 5 0 5 5 0 5 5 00 333 3 3 33 77 7 3 3 3 3 3333 7 7 3 7 3 7 3 0 3 3 3 3 3 77 3 5 000 0 0 55 5 5 5 0 0 5 0 5 5 5 55 5 5 0 5 5 5 5 5 0 0 0 5 5 5 0 5 0 55 55 0 0 5 0 5 0 77777 333333 3 3 0 5 0 2 4444 4 9 4 11 11111111 4 4 4 444 4 4 0 4 666666666666666 0 7777777777 4 11111111111111111 2 4 4444 777777777777777777777777777777777777 777777777777777 7 88888888888888888888888 4 4444444444444444444444444 5 222222 5 3333 777777 444444444 444 666 11111 3 55 888 777777777777 7 000 3 6 000000000 7 7 4 5 000000000 00 1111111111111111 0 4 0 4 44 0 8 22222 00 6 88 4 0 44 111111111111111111111111 00 0000 2 0 2 88 2 8 2 22 7 7 0 00 5 0 5 5 5 0 0 22222 4 0000000 3 7 7 7 777777777777777777 77777 7 0 7 3 3333333
consensus : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAG--AGCCCC--CTC-CTCCT-GAT--TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TCT------TGA-TC--A-------A-ANA--TCCAGACATG-T----ATACA------AG------------G------------GATCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACA---AT---CA---G---AA-AT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCATATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACA----AGNT-CAG-GTAA-CCAAG------------TAC---ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
Reference ( family-1450 ) : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAG--AGCCCC--CTC-CTCCT-GAT--TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TCT------TGA-TC--A-------A-ANA--TCCAGACATG-T----ATACA------AG------------G------------GATCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACA---AT---CA---G---AA-AT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCATATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACA----AGNT-CAG-GTAA-CCAAG------------TAC---ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
gi|1 : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTGAATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGT-GTACTCTGTAACATC--GTATTTTA-AAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTAC-AAAACTAAAACTAATACCCCTTTTGCCAAAAG-TCAAGGTGGTGGTAATGGTTTGGGTGTGG--TCAA-CGAGTGATAAAGCTAAATATCTTTCTC-CCGACCTTTGAAATCTTTAATCG-TGGGGAGTGGGGAGGGAGGTT-TTCTTCTATCACTACATGG-GTTCAATGATT-CATCACTTCAAGCTTACATCCA-A-A-GTATC------TAA----ACACTTTACTTTACACG-TGAAC-----------ATGCATGT---AAACCTAACAAAATA-TGAATGTTGTCCAAAAAGCGAGGAACCAG--AGCTCC--CTT--TCCT-GAT--TACATTCGCCTGTATTTAAAAAGTCTATATAATGATAACAA-TCCCAACAACAAC-CGACATA-TTTCTATCAGAACATGTCACA-TAAGCCGATCTTTGTTTGTATCCATTGACCA-TA-TATAAAGTAAGTATAA-TAACA-TCGTAA-AAGGTACACGAAAA-TGTTTCAAA-TGTAACTCTGTATAAAAAGATATACACTGGTACAGGCAT-CTGCTTTCCTAC-TGCATTTTCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT---GTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATCAAT-ACAGACATTGTGTTTTATGAT-ATTCATACAAA-TTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAA-TGTACCAACCTGTTAACATGAATAA-CGTAG---CG-TGTT--AGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGAAGATCAACTTATTTAATGATGTTCT-CATTTTAAAAAAAAACC-TTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTG-ATCATTACAAA-TACTTCCTAG--GTATATGAGTCTGGGTTTTTAGATCTT-GGTAAG-TTTCTATCTTAAACACTATGACGCA-GCGT-CACGTTACCAGTAACTAATAAATACACT-GGAGTTGT-CGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTTGGGGGAAG-AAGGAAAATGTGTCT-ACAGAGGACGCGAT-CCAAAAATTAAGGGACCTGGAAGAAAT-GTTAAATAAAAAATCAGAAC--ATCTGGAACAT--AAAATTCATGAGGAAACGGA-AAAGGC-TAGAAATGCTGGATTTCAAAACAAA-CGAGGTATGCTGATTAAT---TTGCTTCTACTTTTA-G-TACA-TGTACT-ATTCATTCCTTTTC----CCTT-ACC-AAGAAC-AA--CAGACG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TTT------TGA-TC--A-------A-ACT--TTTAGATATG-T----ATACA------AG------------G------------AATCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-TACCT-AAATGAACA---GT----A---G---AA-AT---CACAAAATT-TGTAAAAGT-----------------------------ACTGTTTGTGACTGAATAAA---TTTCTGTA--GCACAACTTAAAAATTAAACTG--CCAAAAGAAAACAAACTTAAGACAGTGACAAATAAC-AGCTATCAAAATACTCCTATCTACAGGT-ATTGGTGTACATAACCTACA-CAATACATCTATTATCAG-TACTGCTTATAGATTTAGGTATTGGTGTACATAACCTACATCAGTA-CTGCTTATAGATTTGACAAGTACAAAAACAAAGGT-------AACATGTATGTGACTAGCCAATAAGAATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAA-GATCGT--GCTGGTCATGATCCCACCAAAGCATCAGAT-AGCACAGCACA-CAAACTATAAGATCAGGTGACAG-GT-AACCAAACTAATGTTG-TTTTCAAAATAAATGTTAGAGTAAT-ACTGGTTAAAGCATGTAACATAGCAAG---CAAACTATAAACA----AGAT-CAG-GTAA-CCAAACTAACCTTGCC-TACAAAATTAC-----CGGCCCCAGCAGG-TAGCACAGCATACAACNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNAACCTCG-GCTGTATG
gi|10 : TAAT-ATCCGTTTCCCTCTAAATCCAT-ACCTAAACAA-AA--CAGAAGCTGTTAAGACT-A-CA-A-TGAT-GT-TTAAAAGG-TATTTAT-TTGATCAA----A----T-----AC-A-CGT------TGA-TC--A-------A-CAA--TCCGGTCATG-T----AT--A------AT------------G------------GA----------------------AA-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA-C-TA----C---AAATA-T-----ACa
gi|11 : CCGAAACTCTTGGAATGCGGGAATGGAATCCCTTAT-TGGTGCGTTATTCAAG-AACATGCGACGTTTATGGGTGTC-ATATATAAATCGCA---ATT---TTA-ACGATCAGTAGTAC-AAGT----AGTGTTTGAATA-ATTGAGATATGATACACAAATTA---GCAAAAAAAActaaaactacatacac
gi|12 : ATT--T-CATCAGTTCAAGCATACACTC-T-----CACCATTCAATAATGTA----TGGGAACCAACCACT---CCATCATACGTTGTGCATGTACAAAG---AGCA-GATAATGAAGGCCGT-CAAAAAGgactacc
gi|13 : attggatc---------------AT-GA-----------C-----------TACTAAAA----------TAT---G---------T-CA------CA-T----G------ACTA-A-TA----A---AAGTG-T-----ACagtatcaccctatcctctattgtgcatacc
gi|13 : aaTCAC---------------AT-GA-----------C-----------TAATAAAAGTGTACCTTCTGT---A-----ATAAC-TA------CA-T----GCA----ACTATC-TA----GTACAAACA-T-----GTATG-CACC--AAATGAACA---AT---cttctgtaataactacatgcaactatctagtacaaacatgtatgcaccaaatgaacaat
gi|14 : aaatgactactaaaatatgCCAGGTAATATGAATATGAATAAA-TAATGTGTAAAAGTAG-GGTCATAACCCACAAGTTGA-AAGGATCAT
gi|15 : tgtataaaactttCT------TGA-TC--A-------A-CAA--TCCAGACATG-T----ATA-A------AA------------G------------GA--AC---------------A---A-----------C-----------TA-TAAAA-----------AA---A-----A--AT-CA------CA-TGACAG------ACTA-C-TA----G---A---A-T-----ACATA-CAC
gi|16 : c---CAGACTATAA-TA----AGCT-CAG-GTAT-CCCAG------------TAC---GTTAC-----CGGCCCCAGCAGG-TGACAAAGGATAGAAg
gi|17 : aT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-TA-A-TTAT-GT-TGAAATTG-TATTact
gi|18 : ctCAACCTC-GGTGATTCCGGAATCTATATCAAAC-CTCCGGCTGTATG
gi|2 : CCACTATATTTCTCA--TATT--GGTCTTTCTTT-GAAAACCTTTGATTCCCTTTCACTAACTAGGA-TG-ATTGTGCCATGTTTGTATGCAA-TGGT-CTGGA-AGCGGAGAATAA-TCGAAA-TGTTAGGCGTTGTACTCTGTAACATCTCGTAT---ACAAAGGGGATTGTAT---ACGAT-GCCCAAAAAGAAATGT-AACGATAGTACGAAAACTAAAACTAA-ACCCCT----CCAAAAGGTCAAG-TGGTGGTAATGGT----GTGTGGAGTCAAACGAGTGATAAAGCTAA-TATCTTTCTTGCCGACCTTTGAAATCTTTAATCAATGGGGA-TGGG-AGGGAGGTTTTTCTTCTATCACTACATGGAGTTCAATA--TGCATCACTTCAAGCTTACATCCA-A-A-GTATCA------AACAT----CTTTAC-TTACACGGTGA---------C-T---GCATGTGTAAAACCTAACAA-ATA-TGAATGTTGTCCAAAAAGCAGGAAACCA---AGCCTC--C---CTCCT-GAT--TA-ATT-GCCTGTATT--AAAAGT-TATATAATGATAACAAATCCCAACAA-AACACGACATAATTTCTATCAGAACATGTCACAGTAA-CCGATCTTTGTTTG-ATCCAT-GACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGG-ACACGAAAAATGTTTCAAAATGTAACTCTGT-TATAAAGATATACACTGGTACAGGCATTCTGCTT-CCTACCTGCATT-CCGGACATTCCCTTCAATGTAATGACTTT-AATAT-TTA-ATG-ACTT--GTGGGTCCGAA---CTTGGAATA-GGGAATG-AATT--TTATGTGGT-----ATTCAGAAAACATGC-ACG-TTATGGGTGTCAATATATAA----CAGACATTGTGTTT-ATGAT-ATTCATACAAAATTACAAATA-TTGAATATGTTGA-AGATTATTTACG-ATTAATGGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTCTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCAGAGATCAAC-TA-TTAATGATGTTCTTCATTTTTAAAAAAAACCGTTATGTATTGTA-AGT-TGCGAATTCGTTATAGAC-TGTGTATCATTACAAAATACTTCCTAGTAGTATG-GAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAAC-CTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGT-GAACCAATTTGGAGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAA-TAAGGGA-CTGGAAGAAATTGTTAAATTAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAG-AATGCTGGATTTCAAACCAAAACGA-GTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATT--TCTTT----CCCT-ACC-AAGAACAAA--CAGACG--------A-T-ACCA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-ATTTT------TGA-TCA-A-------A-ACAT-TTTAGATATGAT----ATACA------AG------------G------------AATCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-T-----A---AAATATT-----ACATG-TACCTAAAATGAACA---GT----A---G----A-AT---CACAAAATTGT-AAAAAGTA---CT--------------G-----------GTTTGTGACTGAATAAAATTC-----TGTAGCACAACTTAAAAATTTTAAATTGCCAAAAGAAAACAAACTTAAGACAGTGACAAATAACAAGCTATCAAAATACTCCTATCTACAGGTAATTG-TGTA-ATAA-CTACACCAATACATCTATTATCAGTTACTGCTTATAGATTTAGGTATTGGTGTACATAACCTA-ATCAGTACTTGCTTATAA--TTGACAAGTACAAAAACAAAGGTAACATGTAAT-TGT---TGACTAGCCAATAAG-ATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAAGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACTAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACT-GTTAAAGCATGTAACATAGCAAG---CAAAATATAAACA----AGTT-CAGAGTAA-CCAAACTAACCTTTGCCTACAAAATTAC-----CGGCCCCAGCAGGTTAGCACAGCATACAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATGa
gi|3 : tCT----CCTT-CCC-AAACAC-AA--CAGAAG--------A-T-A-TATACTTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AT-A--CT------CGA-TC--A-------A-AAAATTTCAGACATG-T----AGACA------AGATACAACTTAAAA------------GATCAC---------------AT-GATTGCAAAATGAC-----------TACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAA
gi|3 : TCAC---------------AT-GA-----------C-----------TGCCAAAA----------AA----A-----G--AT-CA------AA-T----G------ATTA-C-TA----A---AAATA-T-----ACCTA-CAACT-Aaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgA-----------C-----------TAC--AAG----------TAT---A-----C--ATGTA------CA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACA---ATCAGCA---G---AA-AT---CACAA---TGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GTACCATTTAAAA-----------CC--AAGAAAGAAGACTTGTGGCAGAGCCAAATAAT-ACCTATCAAAG-ACTC--ATGTACAGAT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCA-TTCTCAGTAT--------------AGTA---GCTTATACATCTGACAAGTACAAAAAGAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAGTATCAACAAAcaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaCTCTAAACACAAAAGATACAT-GTGA-ACAAG------------TGC---ATTACAGTACCAGCCCCAGCAGG-TAACACCGCACATAgcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtAGCAGGTAACACCGCA-----CATACTATG--TA----A--T-GAG-GTAAACCAAA------------TCC---ATTAG-----CAGCCCCAGCAGG-TAACActatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccAGCAGGTAACAGACTATAA--------GGT-CAG-GTAT-CCCAG------------TAC---ATTAC-----CGGCTCCAGCAGG-TAACACAGTATAGAAgactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|4 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccAATTG-TATTTTA-TTGATCAA----A----T-----AT-A--CT------TGA-TCAAA-------A-AAA--T-CAGACATG-T----AGAAA------AG------------GTACAACTTAAAAGATCAC---------------AT-GA-----------CTGCAAAATGACTACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAATA-ac
gi|4 : ------------GATCAA---------------AT-GA-----------T-----------TATTAAAAATATACC---TAT---A-----ACTAC-CATGCGTACA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACA---AT---CATCTG---AA-AT---CACAAAATTGTGAAAGAGTA---CTC--AAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--AAACCATTTAAAA-----------CC-gatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|4 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaataTTTAAAA-----------CC-A--GAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAAGT-GTTCATGTACA-----TACA--AATAAA-CTGTAATCAA-CACCA-ATATCCATCC------------------------TCAGTA-TTGCCTA---ATTTGACAAGTACAAAAACAATGGTAACATG-AACATGTAAGTGACTAGTCAATACGAATATCAATCAAATCATTTGCAAAGGTGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|5 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaatagatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTTCCT----CCTT-CCC-AAGCAC-AA--CAGAAG--------A-T-A-TA-C-TTAT-GT-TGAAATTG-TATTTTACTTGATCAA----A----
gi|5 : tg------------GATCAA---------------AT-GA-----------T-----------TACTAAAAA---------TAT---ACCTACA--AC-TA------CA-T----GTGTACAACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACA---AT---CA---GCTGAA-TT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC--AAGAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAGGT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCATTT-TCAGTATaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaaaatagatcaaatgattactaaaaatatacctacaactacatgtgtacaactatctagtacaaaaatgtatgcaccaaatgaacaatcagctgaattcacaaaattgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggcaccatttaaaaccaagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaggtgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattttcagtattgc
gi|6 : tgcttcctccttcccaagcacaacagaagatatacttatgttgaaattgtattttacttgatcaaaaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaaaataCT----CCTT-ACC-AAGCCC-GA--GAGAAA--------C-T-A-CG-T-TTAT-GT-TGAAATCA-TATTTTA-TAGATAAA----AAAAATCACAGAC-A-TCTACAAAATGAACC--ATAGAGATA-ATA--T---GAC-TG-TTAAAATATA---------------------------------GATCAC---------------AT-GA-----------C-----------TACTAAAAA---------TAT---ACCTAAA--AG-TA------AA-T----GCATTGAACTATC-TAGTCCA---AAAT--T-----GTAAG-CACC--AAATGAACAAACAG---CA---G---AA-AT---CACAAAATC-T--AACAGTA---TTC--AAAA-CATACAAATGTACGAACTGGTTGTGACTTCATAtgc
gi|7 : tcTAATGCGT-GCGTCTTCCT--ACAAT-CAGTGCACTCATT-ATGTCTCT-T----CCTTCACC-AAGCAC-ATGTCAGAAG--------A-T-A-TA-A-TTATCGTGTGAAATTGGTATTTTA-TTGATCAAGCGTA----A-----ACTA-TTT----------TC--A-------AGACA--TTGGAAGAAG-A----ATACAGACTATAG------------C------------GATCACGCTTGATTGACAAAAAT-GA-----------C-----------TACCAAAA----------TA----A-----T--GT-CA------CATT----G------ACTG-CGGA----A---AAGTA-TAGATCACATGACACGT-AAA
gi|7 : TCAC---------------ATTGA-----------C-----------TGCGGAAAAG--------TAT---A-----G--AT-CA------CA-T----G------AC-A-CGTA----A---ACATA-T-----ACCTA-CAcatatacctacaatct
gi|8 : taatgcgtgcgtcttcctacaatcagtgcactcattatgtctcttccttcaccaagcacatgtcagaagatataattatcgtgtgaaattggtattttattgatcaagcgtaaactattttcaagacattggaagaagaatacagactatagcgatcacgcttgattgacaaaaatgactaccaaaataatgCCAATCTTTGAAATATTGAATCAAAGG----TTTG-AG-----CTCTACTTCTATAACCGTATGG-GATCA-CA--T-CATCATTTCAAGCTTACATTCGTACATGTACCATTCATTAACGTAACACTTGGGGCAAAGC-GTGAACTAT--TGT-TT-TGTGTTTG-GAAATATAA-AAGATAATGAAAGTTGT-TAAAAAGAAAAGGACATGGTAACCCCTACTCGCTCCTCGATTCTACA-T-GCCTG--TT--AAATGTCTATatct
gi|9 : ttCTCCCT----CTTT-ACCTAAATAC-AA--CAGAAG--------A-TTA-CA-A-TGAT-GT-TGGATATG-CATTTTA-TTGAT-GA----A----T-----AC-A-CTT------TGA-TA--A-------A-TCA--TCCAGTCATG-T----AT------------------------------------GATAAA---------------A---A-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA----A----A---ACAT--T-----A------AGCT-AAA--AACT---AT---CC---A---AATATTTGTATCTAATTGTAAAAGAATATACTTCCTCAAATCATAGGAATGTAg
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 11 1 1 1 1 1 1 1 1 1 11 22222 222 1 1 1 1 2222 1 1 2222 11 1 1 1 1111 1 1 1 11111 33333333333333333333333333333333333333333333333333333333333 222 1 1 222 3333333 1 11 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 11 22 1 1 2222 1 1 1 1 1 22 1 222 1 11 1 1 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 11 1 1 1 1 1 22222 222222 1 1 11111111 111111111111111 1111111111 11111111111111111 555555555555555555555555555555555555 111111111111111 11111111111111111111111 4444444444444444444444444 222222 222222222 11 111111111111 111 111111111 222222222 11 6666666666666666 1 2 22 44444 22 11 22 555555555555555555555555 11 1 1 11 1 1 1 1 1 1 1 11111 2222222 666666666666666666 11111 1 1 3333333
lowQualScore : 88 88 5 1 5 5 5 5 5 5 5 5 88 77777 111 5 5 5 5 4444 5 5 3333 88 5 5 5 88 7777 3 6 2 3 3 66666 0 22222222222222222222222222222222222222222222222222222222222 2 333 99 2 99 5 1 5 0 555 9999999 3 88 6 7 3 7 88 6 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 5 5 88 333 3 3 88 00 6 7 3 3 7 3333 6 6 3 0 3 0 7 2 7 3 7 3 7 00 7 5 111 5 1 88 5 5 5 1 5 5 5 5 5 5 88 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 1 77 88 5 5 5 1 5 5 77777 555555 7 3 0 2 7 0 9999 4 8 4 66 66666666 4 4 4 555 4 4 4 4 666666666666666 5 5555555555 4 66666666666666666 8 4 9999 444444444444444444444444444444444444 666666666666666 2 55555555555555555555555 0 4444444444444444444444444 2 777777 2 5555 444444 333333333 444 444 77777 3 99 888 999999999999 5 000 4 6 666666666 5 0 1 1 888888888 11 3333333333333333 5 1 8 0 55 8 3 44444 88 0 00 1 8 11 555555555555555555555555 77 8888 3 0 3 66 3 0 3 22 6 6 2 88 5 5 5 5 5 5 5 77777 1 0000000 3 6 6 6 777777777777777777 66666 6 1 0 3 4444444
lowQualScore : .. .. . . . . . . . . . . .. ..... ... . . . . .... . . .... .. . . . .. .... . . . . . ..... . ........................................................... . ... .. . .. . . . . ... ....... . .. . . . . .. . . . . . . . . . . . . . . . . . . . . . . . . . . . .. ... . . .. .. . . . . . .... . . . . . . . . . . . . . .. . . ... . . .. . . . . . . . . . . .. . . . . . . . . . . . . . . . . . .. .. . . . . . . ..... ...... . . . . . . .... . . . .. ........ . . . ... . . . . ............... . .......... . ................. . . .... .................................... ............... . ....................... . ......................... . ...... . .... ...... ......... ... ... ..... . .. ... ............ . ... . . ......... . . . . ......... .. ................ . . . . .. . . ..... .. . .. . . .. ........................ .. .... . . . .. . . . .. . . . .. . . . . . . . ..... . ....... . . . . .................. ..... . . . . .......
lowQualScore : 55 55 5 0 5 0 0 5 0 5 5 5 00 55555 555 5 5 0 5 0000 0 0 5555 00 5 5 0 00 3333 3 7 0 3 2 00000 2 00000000000000000000000000000000000000000000000000000000000 0 555 00 5 88 5 0 0 7 000 3333333 3 33 7 3 3 3 33 7 5 0 5 5 0 0 5 5 5 5 5 0 5 5 5 5 5 0 5 5 0 5 5 0 5 5 00 333 3 3 33 77 7 3 3 3 3 3333 7 7 3 7 3 7 3 0 3 3 3 3 3 77 3 5 000 0 0 55 5 5 5 0 0 5 0 5 5 5 55 5 5 0 5 5 5 5 5 0 0 0 5 5 5 0 5 0 55 55 0 0 5 0 5 0 77777 333333 3 3 0 5 0 2 4444 4 9 4 11 11111111 4 4 4 444 4 4 0 4 666666666666666 0 7777777777 4 11111111111111111 2 4 4444 777777777777777777777777777777777777 777777777777777 7 88888888888888888888888 4 4444444444444444444444444 5 222222 5 3333 777777 444444444 444 666 11111 3 55 888 777777777777 7 000 3 6 000000000 7 7 4 5 000000000 00 1111111111111111 0 4 0 4 44 0 8 22222 00 6 88 4 0 44 111111111111111111111111 00 0000 2 0 2 88 2 8 2 22 7 7 0 00 5 0 5 5 5 0 0 22222 4 0000000 3 7 7 7 777777777777777777 77777 7 0 7 3 3333333
consensus : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAG--AGCCCC--CTC-CTCCT-GAT--TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TCT------TGA-TC--A-------A-ANA--TCCAGACATG-T----ATACA------AG------------G------------GATCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACA---AT---CA---G---AA-AT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCATATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACA----AGNT-CAG-GTAA-CCAAG------------TAC---ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
Reference ( family-1450 ) : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAG--AGCCCC--CTC-CTCCT-GAT--TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TCT------TGA-TC--A-------A-ANA--TCCAGACATG-T----ATACA------AG------------G------------GATCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACA---AT---CA---G---AA-AT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCATATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACA----AGNT-CAG-GTAA-CCAAG------------TAC---ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
gi|1 : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTGAATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGT-GTACTCTGTAACATC--GTATTTTA-AAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTAC-AAAACTAAAACTAATACCCCTTTTGCCAAAAG-TCAAGGTGGTGGTAATGGTTTGGGTGTGG--TCAA-CGAGTGATAAAGCTAAATATCTTTCTC-CCGACCTTTGAAATCTTTAATCG-TGGGGAGTGGGGAGGGAGGTT-TTCTTCTATCACTACATGG-GTTCAATGATT-CATCACTTCAAGCTTACATCCA-A-A-GTATC------TAA----ACACTTTACTTTACACG-TGAAC-----------ATGCATGT---AAACCTAACAAAATA-TGAATGTTGTCCAAAAAGCGAGGAACCAG--AGCTCC--CTT--TCCT-GAT--TACATTCGCCTGTATTTAAAAAGTCTATATAATGATAACAA-TCCCAACAACAAC-CGACATA-TTTCTATCAGAACATGTCACA-TAAGCCGATCTTTGTTTGTATCCATTGACCA-TA-TATAAAGTAAGTATAA-TAACA-TCGTAA-AAGGTACACGAAAA-TGTTTCAAA-TGTAACTCTGTATAAAAAGATATACACTGGTACAGGCAT-CTGCTTTCCTAC-TGCATTTTCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT---GTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATCAAT-ACAGACATTGTGTTTTATGAT-ATTCATACAAA-TTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAA-TGTACCAACCTGTTAACATGAATAA-CGTAG---CG-TGTT--AGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGAAGATCAACTTATTTAATGATGTTCT-CATTTTAAAAAAAAACC-TTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTG-ATCATTACAAA-TACTTCCTAG--GTATATGAGTCTGGGTTTTTAGATCTT-GGTAAG-TTTCTATCTTAAACACTATGACGCA-GCGT-CACGTTACCAGTAACTAATAAATACACT-GGAGTTGT-CGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTTGGGGGAAG-AAGGAAAATGTGTCT-ACAGAGGACGCGAT-CCAAAAATTAAGGGACCTGGAAGAAAT-GTTAAATAAAAAATCAGAAC--ATCTGGAACAT--AAAATTCATGAGGAAACGGA-AAAGGC-TAGAAATGCTGGATTTCAAAACAAA-CGAGGTATGCTGATTAAT---TTGCTTCTACTTTTA-G-TACA-TGTACT-ATTCATTCCTTTTC----CCTT-ACC-AAGAAC-AA--CAGACG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TTT------TGA-TC--A-------A-ACT--TTTAGATATG-T----ATACA------AG------------G------------AATCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-TACCT-AAATGAACA---GT----A---G---AA-AT---CACAAAATT-TGTAAAAGT-----------------------------ACTGTTTGTGACTGAATAAA---TTTCTGTA--GCACAACTTAAAAATTAAACTG--CCAAAAGAAAACAAACTTAAGACAGTGACAAATAAC-AGCTATCAAAATACTCCTATCTACAGGT-ATTGGTGTACATAACCTACA-CAATACATCTATTATCAG-TACTGCTTATAGATTTAGGTATTGGTGTACATAACCTACATCAGTA-CTGCTTATAGATTTGACAAGTACAAAAACAAAGGT-------AACATGTATGTGACTAGCCAATAAGAATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAA-GATCGT--GCTGGTCATGATCCCACCAAAGCATCAGAT-AGCACAGCACA-CAAACTATAAGATCAGGTGACAG-GT-AACCAAACTAATGTTG-TTTTCAAAATAAATGTTAGAGTAAT-ACTGGTTAAAGCATGTAACATAGCAAG---CAAACTATAAACA----AGAT-CAG-GTAA-CCAAACTAACCTTGCC-TACAAAATTAC-----CGGCCCCAGCAGG-TAGCACAGCATACAACNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNAACCTCG-GCTGTATG
gi|10 : TAAT-ATCCGTTTCCCTCTAAATCCAT-ACCTAAACAA-AA--CAGAAGCTGTTAAGACT-A-CA-A-TGAT-GT-TTAAAAGG-TATTTAT-TTGATCAA----A----T-----AC-A-CGT------TGA-TC--A-------A-CAA--TCCGGTCATG-T----AT--A------AT------------G------------GA----------------------AA-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA-C-TA----C---AAATA-T-----ACa
gi|11 : CCGAAACTCTTGGAATGCGGGAATGGAATCCCTTAT-TGGTGCGTTATTCAAG-AACATGCGACGTTTATGGGTGTC-ATATATAAATCGCA---ATT---TTA-ACGATCAGTAGTAC-AAGT----AGTGTTTGAATA-ATTGAGATATGATACACAAATTA---GCAAAAAAAActaaaactacatacac
gi|12 : ATT--T-CATCAGTTCAAGCATACACTC-T-----CACCATTCAATAATGTA----TGGGAACCAACCACT---CCATCATACGTTGTGCATGTACAAAG---AGCA-GATAATGAAGGCCGT-CAAAAAGgactacc
gi|13 : attggatc---------------AT-GA-----------C-----------TACTAAAA----------TAT---G---------T-CA------CA-T----G------ACTA-A-TA----A---AAGTG-T-----ACagtatcaccctatcctctattgtgcatacc
gi|13 : aaTCAC---------------AT-GA-----------C-----------TAATAAAAGTGTACCTTCTGT---A-----ATAAC-TA------CA-T----GCA----ACTATC-TA----GTACAAACA-T-----GTATG-CACC--AAATGAACA---AT---cttctgtaataactacatgcaactatctagtacaaacatgtatgcaccaaatgaacaat
gi|14 : aaatgactactaaaatatgCCAGGTAATATGAATATGAATAAA-TAATGTGTAAAAGTAG-GGTCATAACCCACAAGTTGA-AAGGATCAT
gi|15 : tgtataaaactttCT------TGA-TC--A-------A-CAA--TCCAGACATG-T----ATA-A------AA------------G------------GA--AC---------------A---A-----------C-----------TA-TAAAA-----------AA---A-----A--AT-CA------CA-TGACAG------ACTA-C-TA----G---A---A-T-----ACATA-CAC
gi|16 : c---CAGACTATAA-TA----AGCT-CAG-GTAT-CCCAG------------TAC---GTTAC-----CGGCCCCAGCAGG-TGACAAAGGATAGAAg
gi|17 : aT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-TA-A-TTAT-GT-TGAAATTG-TATTact
gi|18 : ctCAACCTC-GGTGATTCCGGAATCTATATCAAAC-CTCCGGCTGTATG
gi|2 : CCACTATATTTCTCA--TATT--GGTCTTTCTTT-GAAAACCTTTGATTCCCTTTCACTAACTAGGA-TG-ATTGTGCCATGTTTGTATGCAA-TGGT-CTGGA-AGCGGAGAATAA-TCGAAA-TGTTAGGCGTTGTACTCTGTAACATCTCGTAT---ACAAAGGGGATTGTAT---ACGAT-GCCCAAAAAGAAATGT-AACGATAGTACGAAAACTAAAACTAA-ACCCCT----CCAAAAGGTCAAG-TGGTGGTAATGGT----GTGTGGAGTCAAACGAGTGATAAAGCTAA-TATCTTTCTTGCCGACCTTTGAAATCTTTAATCAATGGGGA-TGGG-AGGGAGGTTTTTCTTCTATCACTACATGGAGTTCAATA--TGCATCACTTCAAGCTTACATCCA-A-A-GTATCA------AACAT----CTTTAC-TTACACGGTGA---------C-T---GCATGTGTAAAACCTAACAA-ATA-TGAATGTTGTCCAAAAAGCAGGAAACCA---AGCCTC--C---CTCCT-GAT--TA-ATT-GCCTGTATT--AAAAGT-TATATAATGATAACAAATCCCAACAA-AACACGACATAATTTCTATCAGAACATGTCACAGTAA-CCGATCTTTGTTTG-ATCCAT-GACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGG-ACACGAAAAATGTTTCAAAATGTAACTCTGT-TATAAAGATATACACTGGTACAGGCATTCTGCTT-CCTACCTGCATT-CCGGACATTCCCTTCAATGTAATGACTTT-AATAT-TTA-ATG-ACTT--GTGGGTCCGAA---CTTGGAATA-GGGAATG-AATT--TTATGTGGT-----ATTCAGAAAACATGC-ACG-TTATGGGTGTCAATATATAA----CAGACATTGTGTTT-ATGAT-ATTCATACAAAATTACAAATA-TTGAATATGTTGA-AGATTATTTACG-ATTAATGGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTCTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCAGAGATCAAC-TA-TTAATGATGTTCTTCATTTTTAAAAAAAACCGTTATGTATTGTA-AGT-TGCGAATTCGTTATAGAC-TGTGTATCATTACAAAATACTTCCTAGTAGTATG-GAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAAC-CTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGT-GAACCAATTTGGAGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAA-TAAGGGA-CTGGAAGAAATTGTTAAATTAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAG-AATGCTGGATTTCAAACCAAAACGA-GTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATT--TCTTT----CCCT-ACC-AAGAACAAA--CAGACG--------A-T-ACCA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-ATTTT------TGA-TCA-A-------A-ACAT-TTTAGATATGAT----ATACA------AG------------G------------AATCAC---------------AT-GG-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-T-----A---AAATATT-----ACATG-TACCTAAAATGAACA---GT----A---G----A-AT---CACAAAATTGT-AAAAAGTA---CT--------------G-----------GTTTGTGACTGAATAAAATTC-----TGTAGCACAACTTAAAAATTTTAAATTGCCAAAAGAAAACAAACTTAAGACAGTGACAAATAACAAGCTATCAAAATACTCCTATCTACAGGTAATTG-TGTA-ATAA-CTACACCAATACATCTATTATCAGTTACTGCTTATAGATTTAGGTATTGGTGTACATAACCTA-ATCAGTACTTGCTTATAA--TTGACAAGTACAAAAACAAAGGTAACATGTAAT-TGT---TGACTAGCCAATAAG-ATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAAGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACTAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACT-GTTAAAGCATGTAACATAGCAAG---CAAAATATAAACA----AGTT-CAGAGTAA-CCAAACTAACCTTTGCCTACAAAATTAC-----CGGCCCCAGCAGGTTAGCACAGCATACAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATGa
gi|3 : tCT----CCTT-CCC-AAACAC-AA--CAGAAG--------A-T-A-TATACTTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AT-A--CT------CGA-TC--A-------A-AAAATTTCAGACATG-T----AGACA------AGATACAACTTAAAA------------GATCAC---------------AT-GATTGCAAAATGAC-----------TACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAA
gi|3 : TCAC---------------AT-GA-----------C-----------TGCCAAAA----------AA----A-----G--AT-CA------AA-T----G------ATTA-C-TA----A---AAATA-T-----ACCTA-CAACT-Aaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgA-----------C-----------TAC--AAG----------TAT---A-----C--ATGTA------CA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACA---ATCAGCA---G---AA-AT---CACAA---TGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GTACCATTTAAAA-----------CC--AAGAAAGAAGACTTGTGGCAGAGCCAAATAAT-ACCTATCAAAG-ACTC--ATGTACAGAT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCA-TTCTCAGTAT--------------AGTA---GCTTATACATCTGACAAGTACAAAAAGAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAGTATCAACAAAcaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaCTCTAAACACAAAAGATACAT-GTGA-ACAAG------------TGC---ATTACAGTACCAGCCCCAGCAGG-TAACACCGCACATAgcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtAGCAGGTAACACCGCA-----CATACTATG--TA----A--T-GAG-GTAAACCAAA------------TCC---ATTAG-----CAGCCCCAGCAGG-TAACActatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccAGCAGGTAACAGACTATAA--------GGT-CAG-GTAT-CCCAG------------TAC---ATTAC-----CGGCTCCAGCAGG-TAACACAGTATAGAAgactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|4 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccAATTG-TATTTTA-TTGATCAA----A----T-----AT-A--CT------TGA-TCAAA-------A-AAA--T-CAGACATG-T----AGAAA------AG------------GTACAACTTAAAAGATCAC---------------AT-GA-----------CTGCAAAATGACTACTAAAA----------TAT------------GT-CA------CA-T----G------ACTG-C-CA----A---AAATA-ac
gi|4 : ------------GATCAA---------------AT-GA-----------T-----------TATTAAAAATATACC---TAT---A-----ACTAC-CATGCGTACA-T----GCA----ACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACA---AT---CATCTG---AA-AT---CACAAAATTGTGAAAGAGTA---CTC--AAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--AAACCATTTAAAA-----------CC-gatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|4 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaataTTTAAAA-----------CC-A--GAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAAGT-GTTCATGTACA-----TACA--AATAAA-CTGTAATCAA-CACCA-ATATCCATCC------------------------TCAGTA-TTGCCTA---ATTTGACAAGTACAAAAACAATGGTAACATG-AACATGTAAGTGACTAGTCAATACGAATATCAATCAAATCATTTGCAAAGGTGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|5 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaatagatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTTCCT----CCTT-CCC-AAGCAC-AA--CAGAAG--------A-T-A-TA-C-TTAT-GT-TGAAATTG-TATTTTACTTGATCAA----A----
gi|5 : tg------------GATCAA---------------AT-GA-----------T-----------TACTAAAAA---------TAT---ACCTACA--AC-TA------CA-T----GTGTACAACTATC-TAGTACA---AAA-A-T-----GTATG-CACC--AAATGAACA---AT---CA---GCTGAA-TT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC--AAGAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAGGT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCA-ATATACATCCATTT-TCAGTATaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaaaatagatcaaatgattactaaaaatatacctacaactacatgtgtacaactatctagtacaaaaatgtatgcaccaaatgaacaatcagctgaattcacaaaattgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggcaccatttaaaaccaagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaggtgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattttcagtattgc
gi|6 : tgcttcctccttcccaagcacaacagaagatatacttatgttgaaattgtattttacttgatcaaaaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaaaataCT----CCTT-ACC-AAGCCC-GA--GAGAAA--------C-T-A-CG-T-TTAT-GT-TGAAATCA-TATTTTA-TAGATAAA----AAAAATCACAGAC-A-TCTACAAAATGAACC--ATAGAGATA-ATA--T---GAC-TG-TTAAAATATA---------------------------------GATCAC---------------AT-GA-----------C-----------TACTAAAAA---------TAT---ACCTAAA--AG-TA------AA-T----GCATTGAACTATC-TAGTCCA---AAAT--T-----GTAAG-CACC--AAATGAACAAACAG---CA---G---AA-AT---CACAAAATC-T--AACAGTA---TTC--AAAA-CATACAAATGTACGAACTGGTTGTGACTTCATAtgc
gi|7 : tcTAATGCGT-GCGTCTTCCT--ACAAT-CAGTGCACTCATT-ATGTCTCT-T----CCTTCACC-AAGCAC-ATGTCAGAAG--------A-T-A-TA-A-TTATCGTGTGAAATTGGTATTTTA-TTGATCAAGCGTA----A-----ACTA-TTT----------TC--A-------AGACA--TTGGAAGAAG-A----ATACAGACTATAG------------C------------GATCACGCTTGATTGACAAAAAT-GA-----------C-----------TACCAAAA----------TA----A-----T--GT-CA------CATT----G------ACTG-CGGA----A---AAGTA-TAGATCACATGACACGT-AAA
gi|7 : TCAC---------------ATTGA-----------C-----------TGCGGAAAAG--------TAT---A-----G--AT-CA------CA-T----G------AC-A-CGTA----A---ACATA-T-----ACCTA-CAcatatacctacaatct
gi|8 : taatgcgtgcgtcttcctacaatcagtgcactcattatgtctcttccttcaccaagcacatgtcagaagatataattatcgtgtgaaattggtattttattgatcaagcgtaaactattttcaagacattggaagaagaatacagactatagcgatcacgcttgattgacaaaaatgactaccaaaataatgCCAATCTTTGAAATATTGAATCAAAGG----TTTG-AG-----CTCTACTTCTATAACCGTATGG-GATCA-CA--T-CATCATTTCAAGCTTACATTCGTACATGTACCATTCATTAACGTAACACTTGGGGCAAAGC-GTGAACTAT--TGT-TT-TGTGTTTG-GAAATATAA-AAGATAATGAAAGTTGT-TAAAAAGAAAAGGACATGGTAACCCCTACTCGCTCCTCGATTCTACA-T-GCCTG--TT--AAATGTCTATatct
gi|9 : ttCTCCCT----CTTT-ACCTAAATAC-AA--CAGAAG--------A-TTA-CA-A-TGAT-GT-TGGATATG-CATTTTA-TTGAT-GA----A----T-----AC-A-CTT------TGA-TA--A-------A-TCA--TCCAGTCATG-T----AT------------------------------------GATAAA---------------A---A-----------C----------------AAA----------TATAACA-----G--AT-CA------CA-T----G------ACTA----A----A---ACAT--T-----A------AGCT-AAA--AACT---AT---CC---A---AATATTTGTATCTAATTGTAAAAGAATATACTTCCTCAAATCATAGGAATGTAg
blockSeqs : . . . T . . . . . . . T TC AC . . . G . . G . . AG A . G AA GGA . G T A A ATG GTACATGTACCATTCATTAACGTAACACTTGGGGCAAAGCGTGAACTATTGTTT A ACA CC C AG A G C GGT TACTCGC C TC C T . T . C A . A A G . . . A A A G T . A A . T T . C . . . . . . ACT C G CC GT G A G T A ATCG G G . C A G T T T G A AT A A ACA G C TA . . T T G . . . T A TA . T C . A A T T . G G T T . . T T CC TT G G . C A . GCGT ACAA A G C C T AAAT C T A GT CTGTTAAG C T C TAC C G G C AAAAATCACAG T TCTACAAAA A ATAGAGATAATA C A TAAA ACAAGATACAACTTAAAA GCTTGATTGACAAAA T TTGCAAAATGAC GTGTACCTTCTGTAATA G TGCGTA T GACA TGTACA TCTAGTAC TAC TAT AGATC A TA AAC CAGCAG T TTG G G TACTTCCTC T A A ATTC TA ATTTTAAATTGCCAAA C A A T CT A A TAAC CC TC T T CT AGGTATTGGTGTACATAACCTAA CT TACA A T A AA T A TG C G G GA A C T A T C . GGTAA G ACACAAA C A A A CTAACCTTTGCCTACAAA AGTAC T G A T CCTCCG
blockSeqs : AA . . . C . A TT TCACCATTCAATAATGTATGGGAACCAACCACTCCATCATACGTTG A GTA TA C G A T . . CC . . . . . . . . . . . . T . . . . . . . . . . . A . . . . . . A T AGA . . . C T . . T . . . . . . A . . . . GCGTAA . TTTT . AAAACAT C . . AAAAGGTACAACTTAAAA . . CTGCAAAATGAC ATATACCTATAACT . . . . CATTGA TCTAGTAC . TA . . T . CATCTG . . G G TTCC . A A T . CCA A T . . . . A . . T A . A ATTCTCAGTAT T TAA A . A AA A A AA . . A AG A ACA T . . . TAC . . C . . CTC
blockSeqs : . AT AAAGTATCAAACATCTTTACTTACACGGTGACT G GG . . A . A . . . . . . . . . . . . . A . . . . AT . CGT . AAAAAAT T . . ACAGACTATAGC . . C ATATACCTACA . . . . CA TCTAGTAC . TG . . T . CAGCTG . . G G CTCA . A A T . CCA . T . . . . A . . C A . A . . A A . . . C . TT . T TA A . . . TGC . . T
blockSeqs : . . . . . . . . . A . . . . AT . TTT . AAAAAAA T . . ACAAGG . . C ATATACCTAAA . . . . CA TCTAGTCC . CA . . T . CAG . . G A TTCC . A G T . CCA . T . . . . . . . T A . A C G TA G . . . TCC . . G
blockSeqs : . . . . . . . . . C . . . . AT . CTT . AAGACA T . . AAAAG . . C TATAACAG . . . . CA TCTA . TA . . . . CCA . . G . TTCA . A . . . . . . TAC . .
blockSeqs : . . . . . . . . . T . . . . AT . CT . AACAA C . . AATG . . C TATAACAG . . . . . CGGA . TA . . . . AG . . . . CT . .
blockSeqs : . . . . . . . . . A . . . . AT . CT . AACAA . . . ATA . . C AGTATAG . . . . . CGTA . TA . . . .
blockSeqs : . . . . . . . . . A . . . . . AATCA . . . . . . C TATAG . . . . . CTA . TA . . .
blockSeqs : . . . C TATAC . . . . . ATA . A . . .
blockSeqs : . . T TATG . . . . . CTA . A . .
blockSeqs : . . T AAAA . . . . . CCA . A . .
blockSeqs : . . C AAAG . . . . . CTA . A .
blockSeqs : . . C TAAT . . . . . CCA . T .
blockSeqs : . . C TAT . . . . . CT . T
blockSeqs : C TAT . . . . . A .
blockSeqCons : AANAAA*********** AAAGG******************************* TATAACAG***************** ** CACNG******* TTCN***** T******** CCA************* ** ***** ** T* A* NA***** TAC***************
originalCons : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAG--AGCCCC--CTC-CTCCT-GAT--TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TCT------TGA-TC--A-------A-ANA--TCCAGACATG-T----ATACA------AG------------G------------GATCAC---------------AT-GA-----------C-----------TACTAAAA----------TAT---A-----G--AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACCT-AAATGAACA---AT---CA---G---AA-AT---CACAAAATTGTGAAAGAGTA---TTC--CAAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC-AAAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTACATAA-CTACA-CAATAAATCTGTAATCAA-CACCGCATATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACA----AGNT-CAG-GTAA-CCAAG------------TAC---ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
finalCons : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-TGGG-AGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAG--AGCCCC--CTC-CTCCT-GAT--TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTGTTT-ACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAAT---T-GCTTCTACTT--A-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTA-TTGATCAA----A----T-----AC-A-TCT------TGA-TCAANAAA-----------TCCAGACATG-T----ATAAAGG-------------------------------GATCAC---------------AT-GA-----------C-----------TACTAAAATATAACAG-----------------AT-CA------CA-T----G------ACTA-C-TA----A---AAATA-T-----ACATG-CACC--AAATGAACA---ATCACNG-------AA-AT---CACAAAATTGTGAAAGAGTATTCN-----AAA-CATACAGATGTACAAACTGTTTGTGACTTAATAAAT--------TG--GCACCATTTAAAACCA-------------AGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTC--ATCTACAGGT-GTTGATGTACA-----TACA--AATAAAT-TGTAATCAA-CACCGA-TATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAANA-----AGNT-CAG-GTAA-CCAAGTAC---------------ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 11 1 1 1 1 1 1 1 1 1 11 22222 222 1 1 1 1 2222 1 1 2222 11 1 1 1 222222 1 1 11111 33333333333333333333333333333333333333333333333333333333333 222 1 222 444444 1 11 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 222 1 1 11 22 1 1 2222 1111 1 1 1 1 22 1 22222 11 1 1 1 1 1 1 1 1 1 11 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 11 1 1 1 1 1 22222 11 111 1 1 11111111 11 2222222222222222222 1111111 333333333333333333333333333333333333 222222222222222 11111111111 6666666666666666666666666666666666666666 222222 333333333333333333 33333 22222222222 222222222 11 55555555555 11 1 2 22 222222222222 1 11 555555555555555555555555 11 1 1 11 1 1 1 1 1 1 1 11111 1111 666666666666666666 11111 1 1 3333333
lowQualScore : 88 88 5 1 5 5 5 5 5 5 5 5 88 77777 111 5 5 5 5 4444 5 5 3333 88 5 5 5 88 111111 6 2 3 3 66666 0 22222222222222222222222222222222222222222222222222222222222 2 333 99 2 99 66 1 5 0 555 444444 3 88 6 7 3 7 88 6 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 5 5 88 333 3 3 88 00 6 7 3 3 7 3333 6 7777 0 3 0 7 2 7 3 7 3 7 00 7 5 66666 1 88 5 5 5 1 5 5 5 5 5 5 88 5 5 5 5 5 5 5 5 5 1 5 5 5 5 5 5 1 77 88 5 5 5 1 5 5 77777 88 666 7 3 0 2 7 0 9999 4 8 4 66 66666666 4 4 4 555 4 4 4 1 9999 4 22 777 777 4 3333333333333333333 8888 3333333 4 333333333333333333333333333333333333 777777777777777 44 11111111111 0 8888888888888888888888888888888888888888 2 5555 444444 222222222222222222 444 888888888 666 77 11111 888 4 7 11111111111 0 3 22 888888888 11 88888888888 88 0 5 1 8 0 22 8 3 444444444444 8 0 6 1 8 66 555555555555555555555555 77 8888 3 0 3 66 3 0 3 22 6 6 2 88 5 5 5 5 5 5 5 77777 1 6666 3 6 6 6 777777777777777777 66666 6 1 0 3 4444444
lowQualScore : .. .. . . . . . . . . . . .. ..... ... . . . . .... . . .... .. . . . .. ...... . . . . ..... . ........................................................... . ... .. . .. .. . . . ... ...... . .. . . . . .. . . . . . . . . . . . . . . . . . . . . . . . . . . . .. ... . . .. .. . . . . . .... . .... . . . . . . . . . . .. . . ..... . .. . . . . . . . . . . .. . . . . . . . . . . . . . . . . . .. .. . . . . . . ..... .. ... . . . . . . .... . . . .. ........ . . . ... . . . . .... . .. ... ... . ................... .... ....... . .................................... ............... .. ........... . ........................................ . .... ...... .................. ... ......... ... .. ..... ... . . ........... . . .. ......... .. ........... .. . . . . . .. . . ............ . . . . . .. ........................ .. .... . . . .. . . . .. . . . .. . . . . . . . ..... . .... . . . . .................. ..... . . . . .......
lowQualScore : 55 55 5 0 5 0 0 5 0 5 5 5 00 55555 555 5 5 0 5 0000 0 0 5555 00 5 5 0 00 777777 7 0 3 2 00000 2 00000000000000000000000000000000000000000000000000000000000 0 555 00 5 88 55 0 0 7 000 000000 3 33 7 3 3 3 33 7 5 0 5 5 0 0 5 5 5 5 5 0 5 5 5 5 5 0 5 5 0 5 5 0 5 5 00 333 3 3 33 77 7 3 3 3 3 3333 7 3333 7 3 7 3 0 3 3 3 3 3 77 3 5 00000 0 55 5 5 5 0 0 5 0 5 5 5 55 5 5 0 5 5 5 5 5 0 0 0 5 5 5 0 5 0 55 55 0 0 5 0 5 0 77777 33 000 3 3 0 5 0 2 4444 4 9 4 11 11111111 4 4 4 444 4 4 0 1 4444 4 33 000 000 0 4444444444444444444 5555 0000000 0 222222222222222222222222222222222222 555555555555555 22 99999999999 4 6666666666666666666666666666666666666666 5 3333 777777 777777777777777777 444 666666666 333 99 66666 888 5 6 11111111111 2 1 22 000000000 00 33333333333 33 8 0 4 0 4 00 0 8 222222222222 0 6 0 4 0 66 111111111111111111111111 00 0000 2 0 2 88 2 8 2 22 7 7 0 00 5 0 5 5 5 0 0 22222 4 7777 3 7 7 7 777777777777777777 77777 7 0 7 3 3333333
consensus : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-T-GGGAGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAG--AGCCCC--CT--CTCCT-GAT--TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTG-TTTACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAA-T---TGCTTCTAC--TTA-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTATTGATCAA----ATAC-A-TCTT---G---ATC-A-------AAAAA-T---C-CA----GACA-------TG-T-------ATA------AAA---G-------------GATCAC---------------AT-GAC-----------TACTAAAA----------TATA---------AC--AG--AT-------CACA-T----G------ACT--------A-C-TA----A---AAATA-T---ACATG--CACC--AAATGAACAATCA-CAGAAAT---CACAAAATTGTGAAAGAGTAT------TCNA-AACATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC--AAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTCCTATCTACAGGT-GTTGATGTA-----CA-----TACA-AATAAATCTGTAATCAA-CACCGATTATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTATAAACAAGNT-CAG-GTAA-CCAAG------------TAC---ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
Reference ( family-1450 ) : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTNGATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCGTTGTACTCTGTAACATCTCGTATTTTACAAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTACGAAAACTAAAACTAATACCCCTTTTGCCAAAAGGTCAAGGTGGTGGTAATGGTTTGGGTGTGGAGTCAAACGAGTGATAAAGCTAAATATCTTTCTCGCCGACCTTTGAAATCTTTAATCGATGGGGA-T-GGGAGGGAGGTTCTTCTTCTATCACTACATGG-GTTCAATA--T-CATCACTTCAAGCTTACATCCGTA-A-GTACCATTCA-TAACGTAACACTTNGCGCTACGCGGTGAACCAT--TGC-TTGTGCGTGTGCGAAACCTAACAAGATAATGAANGTTGTCCAAAAAGCGAGGAACCAG--AGCCCC--CTC-CTCCT-GAT--TACATT-GCCTGTATT--AAAAGTCTATATAATGATAACAAATCCCAACAACAACACGACATAATTTCTATCAGAACATGTCACAGTAAGCCGATCTTTGTTTGTATCCATTGACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGGTACACGAAAAATGTTTCAAAATGTAACTCTGTATANAAAGATATACACTGGTACAGGCATTCTGCTTTCCTACCTGCATTTCCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT-TGGTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATAAAT-GCAGACATTGTG-TTTACGAT-ATTCGTACAAAGTTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTNTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGGAGATCAACTTATTTAATGATGTTCTTCATTTTNAAAAAAAACCGTTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTGTATCATTACAAAATACTTCCTAGTAGTATGTGAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAACACTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTNGGGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAATTAAGGGACCTGGAAGAAATTGTTAAATNAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAGAAATGCTGGATTTCAAANCAAAACGAGGTATGCTGATTAA-T---TGCTTCTAC--TTA-GATACA-TGTACT-ATTCATTTCTCTCT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTATTGATCAA----ATAC-A-TCTT---G---ATC-A-------ANAAA-T---C-CA----GACA-------TG-T-------ATA------AAG---G-------------GATCAC---------------AT-GAC-----------TACTAAAA----------TATA---------AC--AG--AT-------CACA-T----G------ACT--------A-C-TA----A---AAATA-T---ACATG--CACC--AAATGAACAATCA-CNGAAAT---CACAAAATTGTGAAAGAGTAT------TCNA-AACATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC--AAGAAAACAGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAGTACTC--ATCTACAGGT-GTTGATGTA-----CA-----TACA-AATAAAT-TGTAATCAA-CACCGA-TATACATCCAGNTATCGGTGTACATAACCTA-ATCAGTA-TTGCTTATANATTTGACAAGTACAAAAACAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAATATCAATAAAATAANATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAGGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACCAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACTGGTTAAAGCATGTAACATAGCAAG---CAGACTAT-AANAAGNT-CAG-GTAA-CCAAG------------TAC---ATTAC-----CGGCCCCAGCAGG-TAACACAGCATANAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATG
gi|1 : CCACTATATTTCTCAATTATTTTGGTCTTTCTTTTGAAAACCTTGAATTCCCTTTCACTAACTAGGAATGGATTGTGCCATGTTTGTATGCAAGTGGTTCTGGAGAGCGGAGAATAAATCGAAAATGTTAGGCG-TGTACTCTGTAACA--TCGTATTTTA-AAAGGGGATTGTATTTTACGATTGCCCAAAAAGAAATGTTAACGATAGTAC-AAAACTAAAACTAATACCCCTTTTGCCAAAA-GTCAAGGTGGTGGTAATGGTTTGGGTGTG--GTC-AACGAGTGATAAAGCTAAATATCTTTCTC-CCGACCTTTGAAATCTTTAATCG-TGGGGAGTGGGGAGGGAGGTT-TTCTTCTATCACTACATGG-GTTCAATGATT-CATCACTTCAAGCTTACATCCA-A-A-GTATC------TA----AACACTTTACTTTACAC-GTGAAC-----------ATGCATGT---AAACCTAACAAAAT-ATGAATGTTGTCCAAAAAGCGAGGAACCAG--AGCTCC--CT--TTCCT-GAT--TACATTCGCCTGTATTTAAAAAGTCTATATAATGATAAC-AATCCCAACAACAAC-CGACAT-ATTTCTATCAGAACATGTCACA-TAAGCCGATCTTTGTTTGTATCCATTGACC-AT-ATATAAAGTAAGTAT-AATAACA-TCGTAA-AAGGTACACG-AAAATGTTTC-AAATGTAACTCTGTATAAAAAGATATACACTGGTACAGGCA-TCTGCTTTCCTA-CTGCATTTTCGGACATTCCCTTCAATGTAATGACTTTTAATATGTTATATGTACTTTCGTGGGTCCGAA---CTTGGAATA-GGGAATG-AATC--TTAT---GTGCGTTATTCAAGAAACATGC-ACG-TTATGGGTGTCAATATATCAAT-ACAGACATTGTGTTTTATGAT-ATTCATACAAA-TTACAAATA-TTGAATATGTTGA-AGATTATTTACGAATTAA-GGCAAT-AAAATGTACCAACCTGTTAACATGAAT-AACGTAG-C---GTGTT--AGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCGAAGATCAACTTATTTAATGATGTTC-TCATTTTAAAAAAAAACC-TTATGTATTGTATAGTCTGCGAATTCGTTATAGACTTGTG-ATCATTAC-AAATACTTCCTAG--GTATATGAGTCTGGGTTTTTAGATC-TTGGTAAG-TTTCTATCTTAAACACTATGACGC-AGCGT-CACGTTACCAGTAACTAATAAATACAC-TGGAGTTG-TCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGTGGAACCAATTTTGGGGGAA-GAAGGAAAATGTGTC-TACAGAGGACGCGA-TCCAAAAATTAAGGGACCTGGAAGAAA-TGTTAAATAAAAAATCAGAA--CATCTGGAACA--TAAAATTCATGAGGAAAC-GGAAAAGGC-TAGAAATGCTGGATTTCAAAAC-AAACGAGGTATGCTGATTAATT---TGCTTCTACTTTTA-G-TACA-TGTACT-ATTCATTCCTTTTC----CCTT-ACC-AAGAAC-AA--CAGACG--------A-T-A-CA-A-TTAT-GT-TGAAATTG-TATTTTATTGATCAA----ATAC-A-TTTT---G---ATC-A-------A-ACT-T---T-TA----GATA-------TG-T-------ATAC-----AAG---G-------------AATCAC---------------AT-GGC-----------TACTAAAA----------TAT--------------AG--AT-------CACA-T----G------ACT--------A-C-TA----A---AAATA-T---ACATG--TACCT-AAATGAACAGT----AGAAAT---CACAAAATT-TGTAAAAGT------------------------------ACTGTTTGTGACTGAATAAA---TTTCTGTA--GCACAACTTAAAAATTAAACTG--CCAAAAGAAAACAAACTTAAGACAGTGACAAATAAC-AGCTATCAAAATACTCCTATCTACAGGT-ATTGGTGTA-----CATAACCTACACAATACATCTATTATCAG-TACTGCTTATAGATTTAGGTATTGGTGTACATAACCTACATCAGTA-CTGCTTATAGATTTGACAAGTACAAAAACAAAGGT-------AACATGTATGTGACTAGCCAATAAGAATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAA-GATCGT--GCTGGTCATGATCCCACCAAAGCATCAGAT-AGCACAGCACA-CAAACTATAAGATCAGGTGACAG-GT-AACCAAACTAATGTTG-TTTTCAAAATAAATGTTAGAGTAAT-ACTGGTTAAAGCATGTAACATAGCAAG---CAAACTATAAACAAGAT-CAG-GTAA-CCAAACTAACCTTGCC-TACAAAATTAC-----CGGCCCCAGCAGG-TAGCACAGCATACAACNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNNAACCTCG-GCTGTATG
gi|10 : TAAT-ATCCGTTTCCCTCTAAATCCAT-ACCTAAACAA-AA--CAGAAGCTGTTAAGACT-A-CA-A-TGAT-GT-TTAAAAGG-TATTTATTTGATCAA----ATAC-A-CGTT---G---ATC-A-------AC-AA-T---C-CG----GTCA-------TG-T-------ATA------ATG---G-------------AA--AC-------------------------------------AAA----------TATA---------AC--AG--AT-------CACA-T----G------ACT--------A-C-TA----C---AAATA-T---ACa
gi|11 : CCGAAACTCTTGGAATGCGGGAATGGAATCCCTTAT-TGGTGCGTTATTCAAG-AACATGCGACGTTTATGGGTGTC-ATATATAAATCGCA---ATT----TTAACGATCAGTAGTAC-AAGT----AGTGTTTGAATA-ATTGAGATATGATACACAAATTA---GCAAAAAAAActaaaactacatacac
gi|12 : ATT--T-CATCAGTTCAAGCATACACTC-T-----CACCATTCAATAATGTA----TGGGAACCAACCACT---CCATCATACGTTGTGCATGTACAAAG---AGCA-GATAATGAAGGCCGT-CAAAAAGgactacc
gi|13 : attggatc---------------AT-GAC-----------TACTAAAA----------TATG------------------T-------CACA-T----G------ACT--------A-A-TA----A---AAGTG-T---ACagtatcaccctatcctctattgtgcatacc
gi|13 : aaTCAC---------------AT-GAC-----------TAATAAAAGTGTACCTTCTGTA---------AT--A---AC-------TACA-T----GCA----ACT--------ATC-TA----GTACAAACA-T---GTATG--CACC--AAATGAACAATcttctgtaataactacatgcaactatctagtacaaacatgtatgcaccaaatgaacaat
gi|14 : aaatgactactaaaatatgCCAGGTAATATGAATATGAATAAA-TAATGTGTAAAAGTAG-GGTCATAACCCACAAGTTGA-AAGGATCAT
gi|15 : tgtataaaactttCTT---G---ATC-A-------ACAA--T---C-CA----GACA-------TG-T-------ATA------AAA---G-------------GA--AC---------------A---AC-----------TA-TAAAA-------------A---------A---AA--AT-------CACA-TGACAG------ACT--------A-C-TA----G---A---A-T---ACATA--CAC
gi|16 : c---CAGACTAT-AATAAGCT-CAG-GTAT-CCCAG------------TAC---GTTAC-----CGGCCCCAGCAGG-TGACAAAGGATAGAAg
gi|17 : aT----CCTT-ACC-AAGCAC-AA--CAGAAG--------A-T-A-TA-A-TTAT-GT-TGAAATTG-TATTact
gi|18 : ctCAACCTC-GGTGATTCCGGAATCTATATCAAAC-CTCCGGCTGTATG
gi|2 : CCACTATATTTCTCA--TATT--GGTCTTTCTTT-GAAAACCTTTGATTCCCTTTCACTAACTAGGA-TG-ATTGTGCCATGTTTGTATGCAA-TGGT-CTGGA-AGCGGAGAATAA-TCGAAA-TGTTAGGCGTTGTACTCTGTAACATCTCGTAT---ACAAAGGGGATTGTAT---ACGAT-GCCCAAAAAGAAATGT-AACGATAGTACGAAAACTAAAACTAA-ACCCCT----CCAAAAGGTCAAG-TGGTGGTAATGGT----GTGTGGAGTCAAACGAGTGATAAAGCTAA-TATCTTTCTTGCCGACCTTTGAAATCTTTAATCAATGGGGA-T-GGGAGGGAGGTTTTTCTTCTATCACTACATGGAGTTCAATA--TGCATCACTTCAAGCTTACATCCA-A-A-GTATCA------AACAT----CTTTAC-TTACACGGTGA---------C-T---GCATGTGTAAAACCTAACAA-ATA-TGAATGTTGTCCAAAAAGCAGGAAACCA---AGCCTC--C---CTCCT-GAT--TA-ATT-GCCTGTATT--AAAAGT-TATATAATGATAACAAATCCCAACAA-AACACGACATAATTTCTATCAGAACATGTCACAGTAA-CCGATCTTTGTTTG-ATCCAT-GACCAATAATATAAAGTAAGTATAAATAACAGTCGTAATAAGG-ACACGAAAAATGTTTCAAAATGTAACTCTGT-TATAAAGATATACACTGGTACAGGCATTCTGCTT-CCTACCTGCATT-CCGGACATTCCCTTCAATGTAATGACTTT-AATAT-TTA-ATG-ACTT--GTGGGTCCGAA---CTTGGAATA-GGGAATG-AATT--TTATGTGGT-----ATTCAGAAAACATGC-ACG-TTATGGGTGTCAATATATAA----CAGACATTGTG-TTTATGAT-ATTCATACAAAATTACAAATA-TTGAATATGTTGA-AGATTATTTACG-ATTAATGGCAATAAAAATGTACCAACCTGTTAACATGAATAAACGTAGACACGGTCTTTAAGGAGGATTAAACTGAACAGAGAAAAAAATCGCTAATCTTCCAGAACTTTGCCAGAGATCAAC-TA-TTAATGATGTTCTTCATTTTTAAAAAAAACCGTTATGTATTGTA-AGT-TGCGAATTCGTTATAGAC-TGTGTATCATTACAAAATACTTCCTAGTAGTATG-GAGTCTGGGTTTTTAGATCTTTGGTAAGCTTTCTATCTTAAAC-CTATGACGCAAGCGTACACGTTACCAGTAACTAATAAATACACTTGGAGTTGTTCGCTCGTTGAAACATATATTCACTATGGCCTCGAAGTTGT-GAACCAATTTGGAGGGAAGGAAGGAAAATGTGTCTTACAGAGGACGCGATTCCAAAAA-TAAGGGA-CTGGAAGAAATTGTTAAATTAAAAATCAGAACCCATCTGGAACATTTAAAATTCATGAGGAAACGGGGAAAGGCGTAG-AATGCTGGATTTCAAACCAAAACGA-GTATGCTGATTAA-T---TGCTTCTAC--TTA-GATACA-TGTACT-ATTCATT--TCTTT----CCCT-ACC-AAGAACAAA--CAGACG--------A-T-ACCA-A-TTAT-GT-TGAAATTG-TATTTTATTGATCAA----ATAC-ATTTTT---G---ATC-A-------AAACATT---T-TA----GATA-------TGAT-------ATAC-----AAG---G-------------AATCAC---------------AT-GGC-----------TACTAAAA----------TAT--------------AG--AT-------CACA-T----G------ACT--------A-C-T-----A---AAATATT---ACATG--TACCTAAAATGAACAGT----AG-AAT---CACAAAATTGT-AAAAAGTAC------T------------G-----------GTTTGTGACTGAATAAAATTC-----TGTAGCACAACTTAAAAATTTTAAATTGCCAAAAGAAAACAAACTTAAGACAGTGACAAATAACAAGCTATCAAAATACTCCTATCTACAGGTAATTG-TGTAATAACTA-----CACC-AATACATCTATTATCAGTTACTGCTTATAGATTTAGGTATTGGTGTACATAACCTA-ATCAGTACTTGCTTATAA--TTGACAAGTACAAAAACAAAGGTAACATGTAAT-TGT---TGACTAGCCAATAAG-ATATCAATAAAATAAAATGCAAAGGTGGCGGTCATCACCCACAAGTTGAGAAAGATCGTGAGCTGGTCATGATCCCACCAAAGCATCAGATAAGCACAGCACACCAAACTATAAGATCAGGTGACAGTGTAAACTAAACTAATGTTGTTTTTCAAAATAAATGTTAGAGTAATCACT-GTTAAAGCATGTAACATAGCAAG---CAAAATATAAACAAGTT-CAGAGTAA-CCAAACTAACCTTTGCCTACAAAATTAC-----CGGCCCCAGCAGGTTAGCACAGCATACAACCATTCGGCAACCTCAGGTGA-TCCGGAACCTACATCAAA--CTC--GCTGTATGa
gi|3 : tCT----CCTT-CCC-AAACAC-AA--CAGAAG--------A-T-A-TATACTTAT-GT-TGAAATTG-TATTTTATTGATCAA----ATAT-A--CTC---G---ATC-A-------AAAAATT---T-CA----GACA-------TG-TAGACAAGATACAACTTAAA---A-------------GATCACATGATTGCAAA----AT-GAC-----------TACTAAAA----------TAT------------------GT-------CACA-T----G------ACT--------G-C-CA----A---AAA---------AAG---ATC--AAATG----ATTA-CTAAAA
gi|3 : A------AAA---A-------------GATCAA---------------AT-GAT-----------TACTAAAAA---------TATACCTACAACTAC--AA--GTATACATGTACA-T----GCA----ACT--------ATC-TAGTACA---AAA-A-T---GTATG--CACC--AAATGAACAATCAGCAGAAAT---CACAA---TGTGAAAGAGTAT------TCCA-AACATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GTACCATTTAAAA-----------CC--AAGAAAGAAGACTTGTGGCAGAGCCAAATAAT-ACCTATCAAAG-ACTC--ATGTACAGAT-GTTGATGTA-----CA-----TACA-AATAAAT-TGTAATCAA-CACCAA-TATACATCCA-TTCTCAGTAT--------------AGTA---GCTTATACATCTGACAAGTACAAAAAGAAAGGTAACATG-AACATGTAAGTGACTAGCCAATACGAGTATCAACAAAatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaAAAAGATACAT-GTGA-ACAAG------------TGC---ATTACAGTACCAGCCCCAGCAGG-TAACACCGCACATAgcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacAGCAGGTAACACCGCA-----CATACTAT-G-TAA--T-GAG-GTAAACCAAA------------TCC---ATTAG-----CAGCCCCAGCAGG-TAACActatgtaatgaggtaaaccaaatccattagcagccccagcaggtaacagactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|3 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccAGCAGGTAACAGACTAT-AA---GGT-CAG-GTAT-CCCAG------------TAC---ATTAC-----CGGCTCCAGCAGG-TAACACAGTATAGAAgactataaggtcaggtatcccagtacattaccggctccagcaggtaacacagtatagaaac
gi|4 : ctccttcccaaacacaacagaagatatatacttatgttgaaattgtattttattgatcaaatatactcgatcaaaaaatttcagacatgtagacaagatacaacttaaaagatcacatgattgcaaaatgactactaaaatatgtcacatgactgccaaaaaaagatcaaatgattactaaaaatatacctacaactacaagtatacatgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcagcagaaatcacaatgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggtaccatttaaaaccaagaaagaagacttgtggcagagccaaataatacctatcaaagactcatgtacagatgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattctcagtatagtagcttatacatctgacaagtacaaaaagaaaggtaacatgaacatgtaagtgactagccaatacgagtatcaacaaagcactgcctgtacatcataccgagttgagtgcaacaaaaatccgaaatcgattgtgctacatgtacattgtctctaaacacaaaagatacatgtgaacaagtgcattacagtaccagccccagcaggtaacaccgcacatactatgtaatgaggtaaaccaaatccattagcagccccAATTG-TATTTTATTGATCAA----ATAT-A--CTT---G---ATC-A-------AAAAA-A---T-CA----GACA-------TG-T-------AGA------AAA---GGTACAACTTAAAAGATCAC---------------AT-GACTGCAAAATGACTACTAAAA----------TAT------------------GT-------CACA-T----G------ACT--------G-C-CA----A---AAATA---------G---ATC--AAATGAac
gi|4 : A------AAT---A-------------GATCAA---------------AT-GAT-----------TATTAAAAATATACC---TATA---------AC--TACCATGCG----TACA-T----GCA----ACT--------ATC-TAGTACA---AAA-A-T---GTATG--CACC--AAATGAACAATCATCTGAAAT---CACAAAATTGTGAAAGAGTAC------TCAA-AACATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--AAACCATTTAAAA-----------CC--ttattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|4 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaTTTAAAA-----------CC--A-GAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAAGT-GTTCATGTA-----CA-----TACA-AATAAAC-TGTAATCAA-CACCAA-TATCCATCC------------------------TCAGTA-TTGCCTA---ATTTGACAAGTACAAAAACAATGGTAACATG-AACATGTAAGTGACTAGTCAATACGAATATCAATCAAATCATTTGCAAAGGTGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaaaccagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaagtgttcatgtacatacaaataaactgtaatcaacaccaatatccatcctcagtattgcctaatttgacaagtacaaaaacaatggtaacatgaacatgtaagtgactagtcaatacgaatatcaatcaaatcatttgcaaaggtgg
gi|5 : aattgtattttattgatcaaatatacttgatcaaaaaaatcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaaatgactactaaaatatgtcacatgactgccaaaaatagatcaaatgattattaaaaatatacctataactaccatgcgtacatgcaactatctagtacaaaaatgtatgcaccaaatgaacaatcatctgaaatcacaaaattgtgaaagagtactcaaaacatacagatgtacaaactgtttgtgacttaataaattgaaaccatttaaaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTTCCT----CCTT-CCC-AAGCAC-AA--CAGAAG--------A-T-A-TA-C-TTAT-GT-TGAAATTG-TATTTTA--------------------CTT---G---ATC-A-------AAAAA-T---TTCA----GACA-------TG-T-------AGA------AAA---G-------------G--TAC---------------A---AC-----------T--TAAAA----------------------------G--AT-------CACA-T----G------ACTGCAAAGAGA-C-TACT--A---AAATA-TGTTACATGACTGCC--AAA-----AAT------AGAT---CAAATGATTACTAAAAA-TATA-----CCTACAAC-TACATGTGTACAA
gi|5 : tgA------AAT---A-------------GATCAA---------------AT-GAT-----------TACTAAAAA---------TATACCT------AC--A---AC-------TACA-T----GTGTACAACT--------ATC-TAGTACA---AAA-A-T---GTATG--CACC--AAATGAACAATCAGCTGAATT---CACAAAATTGTGAAAGAGTAT------TCCA-AACATACAGATGTACAAACTGTTTGTGACTTAATAAA---T-----TG--GCACCATTTAAAA-----------CC--AAGAAAA-AGACTTATGGCAGTGCCAAATAAC-ACCTATCAAAG-ACTC--ATCTACAGGT-GTTGATGTA-----CA-----TACA-AATAAAT-TGTAATCAA-CACCAA-TATACATCCATTT-TCAGTATctatctagtacaaaaatgtatgcaccaaatgaacaatcagctgaattcacaaaattgtgaaagagtattccaaacatacagatgtacaaactgtttgtgacttaataaattggcaccatttaaaaccaagaaaaagacttatggcagtgccaaataacacctatcaaagactcatctacaggtgttgatgtacatacaaataaattgtaatcaacaccaatatacatccattttcagtattgc
gi|6 : tgcttcctccttcccaagcacaacagaagatatacttatgttgaaattgtattttacttgatcaaaaaatttcagacatgtagaaaaggtacaacttaaaagatcacatgactgcaaagagactactaaaatatgttacatgactgccaaCT----CCTT-ACC-AAGCCC-GA--GAGAAA--------C-T-A-CG-T-TTAT-GT-TGAAATCA-TATTTTATAGATAAA----AAAA-A-TCAC---AGACATCTA-------CAAAA-TGAAC-CATAGAGATAATATGACTG-T--------TA------AAATATA-------------GATCAC---------------AT-GAC-----------TACTAAAAA---------TATA---------CCTAAA--AG-------TAAA-T----GCATTGAACT--------ATC-TAGTCCA---AAAT--T---GTAAG--CACC--AAATGAACAAACAGCAGAAAT---CACAAAATC-T--AACAGTAT------TCAA-AACATACAAATGTACGAACTGGTTGTGACTTCATAtgc
gi|7 : tcTAA-TGCGTGCGTCTTC--CTACAAT-CAGTGCACTCATT-ATGTCTCT-T----CCTTCACC-AAGCAC-ATGTCAGAAG--------A-T-A-TA-A-TTATCGTGTGAAATTGGTATTTTATTGATCAAGCGTAAACTA-TTTTCAAG---A-C-ATTGGAAGAAGAA-T---A-CA----GAC-----------T-------AT--------AG---C-------------GATCACGCTTGATTGACAAAAAT-GAC-----------TACCAAAA----------TA---------------AT--GT-------CACATT----G------ACT--------G-CGGA----A---AAGTA-T---AGAT---CAC-----ATGA
gi|7 : TCAC---------------ATTGAC-----------TGCGGAAA----------AGTA----------T--AG--AT-------CACA-T----G------AC---------A-CGTA----A---ACATA-T---ACCTA--CAcacgtaaacatatacctacaatct
gi|8 : taatgcgtgcgtcttcctacaatcagtgcactcattatgtctcttccttcaccaagcacatgtcagaagatataattatcgtgtgaaattggtattttattgatcaagcgtaaactattttcaagacattggaagaagaatacagactatagcgatcacgcttgattgacaaaaatgactaccaaaataatgCCAATCTTTGAAATATTGAATCAAAGG----T-TTGAG-----CTCTACTTCTATAACCGTATGG-GATCA-CA--T-CATCATTTCAAGCTTACATTCGTACATGTACCATTCATTAACGTAACACTTGGGGCAAAGC-GTGAACTAT--TGT-TT-TGTGTTTG-GAAATATAA-AAGATAATGAAAGTTGT-TAAAAAGAAAAGGACATGGTAACCCCTACTCGCTCCTCGATTCTACA-T-GCCTG--TT--AAATGTCTATatct
gi|9 : ttCTCCCT----CTTT-ACCTAAATAC-AA--CAGAAG--------A-TTA-CA-A-TGAT-GT-TGGATATG-CATTTTATTGAT-GA----ATAC-A-CTTT---G---ATA-A-------AT-CA-T---C-CA----GTCA-------TG-T-------AT---------------------------GATAAA---------------A---AC----------------AAA----------TATA---------AC--AG--AT-------CACA-T----G------ACT------------------A---AAACA-T------TA--AGCT--AAA--AACTATC--CAAATATTTGTATCTAATTGTAAAAGAATATACTTCCTCAA-ATCATAGGAATGTAg