lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111
lowQualScore : 55555555555 222 777777777777777 33333 111111111 333 2 3333333333 2 33333 111 11 55555555555555555555555555555555555 11 3333 777777777777777777 1 1 22222222 111 55555555 333333333333 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 1 44444444444444444 1 111 333333333333333 33333 22222222 1 22222222222222 3333333333 22222222 111111 111 2222222222 2 1111 3333333333 2 2 2 1 1111111111111111111111111111111111111111 333333333333333333 22222222 3333 444444 2222222 22222 88888888888888888888 222 1 1 1 1 4444444444 444444444444 33333333 11 888888888888888 1111111 11 3 222222 1 1 333333333 44444 2222 1 55555 22222 1 33333 11 5555555555 111111 1111 11 11 111 1 1111 1 44444 333333333333 11 1 555555
lowQualScore : 8 4 66666666666 3 4 4 4 4 8 888 0 555555555555555 4 4 4 55 4 99 99 3 22222 3 555 3 3 7 4 000000000 4 666 4 4 4 3 3 3 55 3 8888 555 9999999999 4 4 0 8 4 22222 4 0 3 111 0 4 1 66 4 4 1 77777777777777777777777777777777777 00 66 1111 66 4 444444444444444444 8888 4 6 4 4 55 8888 2 4 8 77777777 111 7 33333333 777777777777 3 999999 44 3 3 55 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 3 6 3 99999999999999999 3 77 000 111111111111111 22222 77 00000000 7 3 2 0 0 44444444444444 2 4444444444 6 99999999 5 2 2 5 222222 7 3 66 66 555 888 2 66 1111111111 0 2222 3333333333 2 5 4 8 4 0 5555555555555555555555555555555555555555 888888 5 3 000000000000000000 3 44444444 8 5555 777777 1111111 0 0 00000 0 33333333333333333333 0 8 555 2 5 0 2 0 0 8 8 8 3333333333 3 8 8 111111111111 6 6 8 6 11111111 222 5 33 777777777777777 8888888 33 1 0 888888 0 0 333333333 333 11111 0000 0 6 8 22222 6 6 22222 5 77777 5 66 2 77 5 6666666666 222222 66 66 5 0000 0 5 66 88 77 5 999 5 1 9 88 1 0000 6 6 6 1 6 55555 6 666666666666 11 8 5 0 777777
lowQualScore : . . ........... . . . . . . ... . ............... . . . .. . .. .. . ..... . ... . . . . ......... . ... . . . . . . .. . .... ... .......... . . . . . ..... . . . ... . . . .. . . . ................................... .. .. .... .. . .................. .... . . . . .. .... . . . ........ ... . ........ ............ . ...... .. . . .. ........................................................................................................................................................ . . . ................. . .. ... ............... ..... .. ........ . . . . . .............. . .......... . ........ . . . . ...... . . .. .. ... ... . .. .......... . .... .......... . . . . . . ........................................ ...... . . .................. . ........ . .... ...... ....... . . ..... . .................... . . ... . . . . . . . . . .......... . . . ............ . . . . ........ ... . .. ............... ....... .. . . ...... . . ......... ... ..... .... . . . ..... . . ..... . ..... . .. . .. . .......... ...... .. .. . .... . . .. .. .. . ... . . . .. . .... . . . . . ..... . ............ .. . . . ......
lowQualScore : 0 0 99999999999 6 0 0 0 0 0 555 8 111111111111111 0 0 4 55 0 55 55 3 99999 3 888 3 6 3 0 999999999 0 555 0 0 0 3 3 3 00 6 5555 888 1111111111 0 0 0 0 0 44444 0 4 6 444 9 4 1 77 4 4 9 77777777777777777777777777777777777 66 11 4444 11 4 666666666666666666 5555 0 0 0 0 55 5555 0 0 0 66666666 444 3 66666666 999999999999 6 666666 66 3 6 00 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 3 7 9 99999999999999999 7 99 000 222222222222222 77777 99 77777777 6 9 5 0 1 33333333333333 9 6666666666 5 55555555 4 2 2 0 000000 3 4 99 99 666 888 1 99 9999999999 0 1111 7777777777 0 7 0 0 0 0 6666666666666666666666666666666666666666 111111 7 7 000000000000000000 2 44444444 0 2222 222222 0000000 8 8 00000 8 88888888888888888888 8 0 555 2 0 0 5 0 0 0 0 0 2222222222 0 0 0 000000000000 7 7 3 7 55555555 222 8 44 222222222222222 5555555 88 2 0 888888 0 0 000000000 555 22222 2222 0 0 0 00000 0 7 99999 0 00000 7 99 2 66 7 2222222222 999999 99 44 0 6666 5 0 99 88 99 7 999 7 7 9 00 2 5555 7 7 7 7 2 00000 7 000000000000 00 0 0 0 555555
consensus : AAGGGTCCTCCAGT-GTC-GTGGCC-----ATTC-TTG-AGTAA-TTTT-A-TCTCG-AGACAAAG-AA--GATTTTC-----AC--TTC--AA-AG-TGTTGTA--A-CT--CT-NATGTAAT-TTCGC----A-AGA---G-TTA-A-TGTT-CTT--A----GCA-TGCA--C-TC-TT-CATACA-T-AGAA--G-ATA----A--TAA--AA------CTC-AT-AAACC-AT-GGTG---AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGATAA-GAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAAAG-----AT-CTA-AACC-AC--AATG--ACGG-CT--AC-GATTGTTATTG--------------T--TTACCCTT----A-CTG-C-CC-ACG--AAGTTG----T-A-A-GGTAGA----TCATG--CTTA-TGCGAAA-AAAGA--TGGCACC-CT-------TACA-AG------CAATTG--A-TTTTT-CAT--CAGC----GC---------CTAC--AT---NGGGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTATAT----TTACATTNTTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGCGNG-G-AC-T-GTTCACCAAA----C---NA--CGAC-TACTA--GA---TCGGCCTACAGAATC---------------AGTCGGGTAAT--T-TTTTT--TTTT--------ACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A---TTCTTTTCAAATGAA-A--TT-AAATGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TNA--TGAT----------TTTACAGTGTTCTTA----AGT-A-C-----GCAC-GCA-CCCTATCCG-CCCAGGA-CGTA--TTGCTA--CTAGTACA--GTA-A--GTA-ACTA---ACATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACA-T-A-TGTATTAAA-GGTATGAAATATNAT-AAA-T-ATGT-TAGACTTTCTTTTATGTAATATG-AT-TTACAAAATAAGTAG-----ATAT----TATGT---A----TTATAAACTCCATGTAT-AATACTAAGCACGGCTTTA-TAGCAT-AAACTTT-GAAAAG-A-AA-TATAGC---C----ATCTGA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGC-AGTACGTAC-AGTCN--A--ATCACTGTAAATGCAATTATTTNTNTATGTT---AGGTTTAA-T-AAA---TGA-TT--AAGCTTTGATTAAT------ATGTATTTG-ACAG-ATAA-TTCTCGAAGCATAAACTGGAA--A--GAA-GG-C-GTCGTAT-TATTGTA-TATTGGGGA-TTTTAGCC---GAACAGCC-CCTACAGA-GGATGCTCATCA--TGTCAT-CAGCC-ATTG-CA-----TTTGAT-----TA--ATTG-TGTAG-AT----GAATA-GCAT-TTTT-GGTTTGGGA--CC-G-CCCT-TTAGTATAACATGCTCCAATTGTAAAAANGTTACCCAA-GT-ATCA-T-CAG-GGAAAAAGGC-T--C-AGTACC-T--A-TGGCACA--G-GAGACC-AATTAAAGGGCAAAGCATGCAC
Reference ( gi|1 ) : AAGGGTCCTCCAGT-GTC-GTGGC------ATT--TTG-AGTAA-TTTT-A-TCTCG-AGACAAAG-A---GATTTT------AC--T----AA-AG-TGTCGTA--A-CT--CT-AATGTAAT-TTCG-----A-AGA---G-TTA-A-TGTT-CTT--A----GTA-TGC---C-TC-TT-CA-ACA-T-AGAA--G-ATA----A--TAA--GA------CTC-AT-AA-CC-AT-GGTG---A-G-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGATAC-GAACG-GGCG-ATCTATAAGTGAAAA--AAC--------AAAAT-----AT-CTA-AA---AC--AATG--A-GA-CT--AC-GATTGTTATTA-----------GT-T--TTACCCTT----A-CTG-C-CC-ACG--AAGTTG----T-A-A-GGTATT----TCATG--TTTA-TGCGAAAGAAAGACGTGGCA-C-TT-------TACA-AG------CAATTG--A-TTTTT-CAT--CA------AT---------CTAC--AT---CGGGGCTCGTG-A-C-GAC-TTG-G-CC--TTCTA-----TCTTCTATAT----TTACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAC-T-GTTCACTAAA----C---GA--C-AG-TACTA--GA---TCGGCCTACAGAATC---------------AGTCGGGTAAT--T-ATTTT--TTTT--------ACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A---CTATTTTCAAATGAA-A--T--AAATGAACGACATGCT-TGATTT--A--GATTATTTGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCATA----AGT-A-C-----ACACTGCA-CC-TATCCG-CC-AGGA-CGTAAATTGCTAGACTAGCACA--GTA-A--GTA-ACTAA--ACATTAATGACAGGCGAAG--TA--AAT-GGAAGTGAACGTGAAAATACA-T-A-TGTATTAAA-GGTATGAAATATCAT-AAA-T-ATGTGTAGACTTTCTTT-ATG-AATACG-AT-TTGCAAAATAAGTAG-----ATAT----TATGT---A----TT-TAAACTCCATGTAT-AATTCTAAACAGGGCTTTA-TAGCAT-AAACTTT-GAAAAG-A-AA-TATA-C---C----ATCTAA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGC-AGTACGTTC-AGCTC--A--ATCACTGTAAATGCAATTATTTTTTTATGTTCTAAGGTTT-G-T-AAA---TTA-TT--AAGC-TTGATTAAT------ATGTATTTG-ACAG-AT-A-TTCTCAAAGCATAAACTGGAA--ATCGAA-GG-C-GTCGCAT-TATTGTAATATTGGGAA-TTTTAG-C---GAAAAG-T-T-TACAGA-GGATGCTCATCA--TATCAT-AAGCC-ATGG-T------TTTGAT-----TA--ATTG-TGTAG-AT----GAATA-GCA--TTT--GGTTTGGGA--TC-G-TCTT-TTAGTATAGCATGCTCCAATTGTAAAAATGTTACCCAA-GT-ATCA-T-CAG-GGAAAGAGG-----C-AGTA-C-T--A-TGG-ACA--G-GAGATC-AATTA------AAAGCATGCACG
gi|13 : AAGGGTCCTCCAGT-GTC-GTGGCC-----ATTC-TTG-ATAAA-TTTT-A-TCTCG-AGACAAAG-AA--GATTTTC-----AC--TTCA-AA-AG-TGTCGTA--A-CT--CT-ATTGTAAT-TTTGC----A-AGA---G-TTA-A-TGTT-CTT--A----GTA-TGCACTC-CC-TT-CATACA-T-AGAA--GCATA----A--TAA--AAG-----CTC-AT-AA-CCCAT-GGTG---AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGACGC-GAACG-GGCGAATCT-TAAGTGAAAAC-AAC--------AAAAG-----ATCCTA-CACGCACA-AATGACA-GA-CTTAACGGATTGTTATTG--------------T--TTACCCTT----A-TTG-C-CC-ACG---AGTTGTAATT-A-A-GGTCAT----TCATGGTTTTATTGCGAAA-AAAGA--TGGCACC-TT-------TACA-AG------CAATTG--ATTTTTT-CATCGCA------GTCC-------CTAC--ATA--TGGGGCTCGTG-A-C-GACTTTG-GCCC--TTCTA-----TCTTTCATA
gi|4 : tAAGGGTCCTCCAGT-GTA-GTGGCC-----ATTC-TTG-AGTAA-TTAT-A-TCTCG-AGACAAAGGA---GATTTTC-----AC--TTT--CA-AG-TATTGTA--A-CT--CC-TATGTAAT-TTGGC----A-AGA---G-TTA-A-TGTT-CTTTCA-----TA-TGCA--C-TC-TT-CATACA-T--GAA--G-ATA----T--TAAAAGA------CTC-ATCAA-CC-AT-GGTG---AAG-ATAAACGAAA-GCCT---GAATGAGAAAT-ACCGAGATAA-GAAAG-GGCG-ATCTAAAAGTGAAAA--AACAGAGCTCTAAAAG-----AT-CTATAAACCAC--AATG--ACGG-CT--GC-GATTGTTATTG--------------T--TTACCCTT----A-CTGCC-CC-ACG--AAGTTG----TAA-A-GGTAGA----TCATG--CTTA-TGCGAA--AAAGA--TGACACC-TC-------TACA-AG------TGATTG--A-TTTTT-CAT--CAGC----AC---------CTACATAT---AGGAGCTTATC-A-C-GAA-TTG-G-CCCTTTCTaattt
gi|6 : tAAGGGTCCTCCAGT-GTC-GTGGCC-----ATTC-TTG-GGTAA-TTTT-A-TCTCA-AGACAAAG-AA--GATTTTC-----AC--TTC--AA-AG-TAATGTA--A-CT--CC-TATGTAAT-TTCGC----A-AGA---G-TTA-A-TGTT-CTT--A----GTA-TGCA--C-TC-CT-CACAGA-C-AGAA--G-ATA----A--TAAAAGG------CTC-AT-AAACC-AT-GGTG---AAG-ATAAACAAAA-GTTT---GA-TGAGAAAT-CC-GA-ATAAAGAACGCGACG-ATCTATAAGTGAAAAC-AAC--------AAAAG-----AT-C-A-AA---ACCAAATG--A-G---C--AC-A--TGTTATTG------------------TACCCTT----AACTG-CATC-ACG--AAGTTG----T-A-A-GGTATA----TCATT--GCTA-TGGGAAA-AAAGA--TGGCACC-TC-------TACA-AA------CAATTG--A-TGTTT-CAT--CAGCACCGGC---------CTAT--AT---AAGG--TCGTGAA-CAGAA-TTGTA-CCT-TTCTA-----TCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaccaaactacgactatagatcggcctacaaaatcactcggataatattttttttttacacctgtactaaatcacataagcaatttaaatgaacggattcttttcaaatgaaattaaataagcaacatgcttgatttagactattcgtgtacctttataatgattttacagtgttcttcagtaccgcacgtaccaaatccgccca
gi|33 : ttAAGGGTCCTCCAGT-GTC-GTGGCC-----ATTC-TTG-AGTAA-TTTT-A-TCTCG-AGACAAAGAA---GATTTTC-----AG--TTC--AA-AG-TGTTGTA--A-CT--CT-CATATAAT-TTCGC----A-AGA---G-TTA-A-TGTT-CTT--A----GCA-TGCA--C-TC-TT-CATACA-T-AGAA--G-ATccaaataaaatttaccccccattcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtgaatcaacctttccaccaaacctactcgctatagaacagtcggtaggtataaattaaataacgcaaaaattgaaatacggattcttcttccaaataaattaaagacaatatgcttgattttcagactacatgtacaattcctgatcatgattaacacatttgcagt
gi|28 : tAAGGGTCCTCCAGT-GTCGGTGCC------A-T--CTG-AGTAA-TTTTAA-TCTCG-AGACAAAG-AAT-GATTTTC-----AG--TTTCAAA-AGTTGTTGTA--A-CT--CTCAATATAAT-TTCGCT---A-AGATTTGTTTA-A-TGTG-ATT--A----GCATTGCAG-C-TC-TC-CATACATT-AGAA--G-ATAAAACA--AAA--AA------CTC-AT-AA-CC-A--GGTGA--A-G-ATAAACAAAA-GCGT---GA
gi|10 : tAAGGGTCCTCCAGT-GTC-GTGGCT-----ATTC-TTG-AGTAA-TTCT-A-TCTCG-AGACAAAG-AA--GATTTTC-----AC--TTC--AA-AG-TATTGTA--A-CT--CT-AATGTAAT-TTCG-----C-AGA---G-
gi|23 : AGGGTCCTCCAGT-GTT-GTGGCC-----ACTC-TTG-AGTAA-TTTT-A-TCTTG-AGACAAAG-A---T-TTTC------ACCTC----CA-AG-TATTGTA--A-CTG-CT--TTTTAAT-TTCG-----AGAGC---G-TGA-A-TGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattgtttacccttgctgcccacgaagttgtacaggtagatcatgcttatgcgaaaaagaaggcacctataggtacaaacaattgatttttcatcagcacctatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggacctgttcaccaaactacgacagtactattgatcggcctacagaatcagttgggtaatt
gi|59 : ttgtAGGGTCCTCCAGT-GTC-GTGGCCGATATGTC--TTG-AGTggaaatcccgagataagaaagggcgatttataagtgaaaaacaacaaaaagatctaaaccacaatgacggctgcgattgttattgtttacacttaccgccccacgaagttgtaaagc
gi|24 : tGGTCCTCCAGTTGTC-GTGCC------ATCGGTTGTAGTAAGTTTT-AATCTCGGAGACAAAG-AATTGATTTTCGAGTTAT--C----AAGAG-TGTTGTTGTA-CTGCCT-CATATAATGTTCGCATATA-GTA---T-TTA-AGTGTGACTT--ACATTGCA-TGCT--C-TC-TCATA-GCA-TTAGAA--G-ATA----AAACAA--AAATTGATCTC-AT-AA-CC-AT-GGTGTCAA-GTATAAAC-AAA-GCGTTGGGGATGA
gi|8 : taTCCTCTAGTTGTC-GTGGCC-----ATTC-TTG-AGTAA-TTT--A-TCTCG-AGACAAAG-A---T-TTTC------AC--TTC--AA-AG-TATTGTA--ATCA--CT-ATAGTAAT-TTCG-----C-AGA---G-TTA-AATGTT-CTT--A----G-A-TGCA--C-TC-TT-CATACA-T-AGAA--G-ATA----A--TAA--AAAG----CTC-AT-AAACC-AT-GGTG---AAG-ATAA-CAAA--GAGT---GAATGAGACAT-CCCGATATA----ACG-GGCG-ATCT-TAAGTGAAAAGCAAC--------GAAACCAGAGGC-TTA-AACC-AC--AATG--A-CAGCT--AC-GATTGTTATT------------GC-TAATTACTCTT----A-CTG-C-CCCACG--AAGTTG----T-A-AAGGCAGA----TCATG--CTTA-TGCGAAA--AAGA--TGGCA-C-CTC------TACA--G------CAATTG--A-TTTTT-CAC--CAGT----AC---------CT----AN---NNNNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNNNN----NNNNNNTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCACCT-GTTCACCAAA----C---TA--CGAC-TAC-A--GA---TCGGCCTGCAGGATC---------------AGTCGGGTAAT-----TTTT--TTTT--------ACACCTGTAATGAATTACATAA-TCAATGACAGGCGAAGT-AAATGAA
gi|16 : gtG-AGTAA-TTTT-A-TCTCG-AGATAAAG-AA--GATTTTC-----AC--TTC--AA-AG-TGTTGTA--A-CT--CT-AATGCAAT-TTCGC----A-AGA---G-TTA-A-TGTT-CTT--A----GTA-TGC---AATC-TT-CATACA-T-AGAG--G-ATA----A--TAA--CAATA---CTC-AT-AA-CCCAT-GGTG---AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGATAC-GAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAAAG-----AT-CTA-AACC-AC--AATG--A-CAGCT--AC-GATTGTTATTG--------------T--TTACCCTT----A-CTG-C-CC-AAG--AAGTTG----TAA-A-GGTTCT----TCATG--CTAA-TGC--AAAAAAGA--TGACACC-TT-------TACA-AG------CAATTG--A-a
gi|5 : T-GACGTAAT-TT-G-----A-AAA---G-TTACA-TTAT-TTT--A-----CA-T-----C-TCGTT-C------T-A-------ATA----A--AAA--AA------CTC-AT-AAACC-AT-------------------AAA-GCGT---GAATGAGAAAT-CCCGAGATAA-GAACG-GGCG-ATCAATAAGTGAAAA--A-C--------AA------------TA-AA---A---AATG--ACGG-CT--AC-GATTGTTATTGTTTACCCCCGGGTGT--TTACCCTTTAATA-CTGTC-CC-ACG--AAGTTG----T-A-AAGGAAGA----TCATG--CTTG-TGCGAAA-AAAGA--TGGCA-C-CTCTATAGCTACA-AG------CAATTG--A-TTTTT-CAT--CA------
gi|57 : TGTAGT-TTCGC----A-AGA---G-TTA-A-TGGT-TTTA-A----GTA-TGCA--C-TC-TT-CT-ACA-T-AGAgcaccggcctataannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcacctgttcaccaaactacggctatagatcggaccacagaatcagtcaggtaatatttttttttttacacctgtactaaattacataagcaaaaattaaataaacaaaattcttttcaaatgaaattgaatgagcgacaagcttgatttagactattcatgcatctttattaagattttacagtgttcttaagtaccgcacgcaccctatccgcccaggacgtattgctagtacagtaactacattaatcaaattaatgacaggcgaagtaaatggaaatg
gi|15 : -ACA-T-AGAA--G-ATA----A--TAAAAGA------CTC-AT-AAATC-AT-GGTG---AAG-ATAAAAAAAAAGCGT---GACTGAGAAAT-CCCGAGATAA-GAACG-GGCA-ATCTATAAGTGAAAAACAACA-------AAAAG-----AT-CTA-AACC-AC--AATG--ACGG-CT--TT-GATTGTTATTG--------------T--TTACCCCT----A-CTGCC-CC-ACG--AAGTAG----TAA-A-GGTGGA----TCATG--CTTA-TGCGAAATAGA----TGGCACC-TC-------TACA-AG------CAATTG--A-TTTTT-TAT--CA-------------------GC--AT---CGGg
gi|35 : at-ACA-T-ATAAATG-ATA----A--AAG--AA------CTCCAT-AAATC-ATAGGTA---AAG-ATAAACAGAA-CCGTTT-GATTGAGAAATCCCCGATATAA-GAAC--GGCG-ATCTATAAGAGAAAAACAAC--------AAAAcctatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcacctgttcaccaaa
gi|23 : atCGAGA-GCGT---GAATGGGAAAT-CCCGAGATAA-GAAAG-GGCG-ATTTATAAGTGAAAAACAACA-------AAAAG-----AT-CTA-AACC-AC--AATG--ACGG-CT--GC-GATTGTTATTG--------------T--TTACACTT----A-CCGCC-CC-ACG--AAGTTG----T-A-A-AGag
gi|2 : ttgtagggtcctccagtgttgtggccactcttgagtaattttatcttgagacaaagattttcacctccaagtattgtaactgctttttaatttT-CTA-AAC--AC--AATG--ACGG-CT--AC-GATTGTT----------------------TA----T----G-C---C-CC-ACGCTAAGTTG----T-A-A-AG-GTTAAGATCAAG--CTTAATGCGAAA--AAGA--TGGCA-C-CTC------TACA-AG------CAATTGCGA-TTTTT-CAT--CA------GCACCACCGGCCTAT--AT---AGGGGCTCATG-AAC-GAA-TTG-AACC--GTCTA-----T--TCTGT-T----TTACATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGC--AC-TTGTTCATTAAA----CATGGA--C----TACTA--GGCCTTCGGCCTACAGAATC---------------AGTCGGGTATT--TTATTTT--T------------CACCTGTACTAA-TTACATAAAGCAA--------AAATT-AAATGAAC-GGA---TTCTTTTCAA-TGAA-A--T-----TAAAC---------TGA--------G-------GT--GCA--TCTTTGT-A---TTA--TGAT----------TGTA-AGT-TGCTTA----AGT-A-CCGGTGACGCCAC--CC-CATCTG-CCCAGGATCGTA--TTGCTAG-----C-CA--GTA---------CTA----CATTAATGACAGGCGAAG--TA--AATCGAAAGTGAACGTG-AAATACA-T-A--------------ATAAAATATCAT-AAATT-ATGC-TAGACTTTTTTT-ATGTGATATG-CC-TGGT-GAATAAGTAGTGGTTACAT----TA------A----TTATAAACTCACTG-AT-AAT----AGCATGGCTTTATTAG-AT-AAACTTGAGAAAAA-AGAA-TATAGC---CATGGATCTGA-TTTTCATCTCCACAGTA-ATT----AACTT-ACACATGTTGCAAGTACGTAC-AAATCATA--ATCACTGTAAATGCAATTATTTGTGGGTGGT---AGGTTTAA-T-AAA---TGA-TTTCAGTT-TTGATTAAT------ATGTATTTG-ACAGAATAA-TTCCTGAAGC-TAAACTGAAAAGATCGAGTGC-C-GTCGTAT-TATTG---TATTGGGGATTTTTAG-C---CGACAG-CAT-TACAGA-GAATGC-CATCA--TGTCAT-CAGCC-ATTG-CA-----TTTGAT-----TA--ATTG-TGTAG-AT----GAATACGAATTTTT--GGTTTGGGAGTCC-GCTCTTCTTAGTATA-CATGC-CGAATTGTAAAGAAGTTACCCAA-TT-ATCA-TGCAG-GAAAAGGTATTC--C-AGTA-C-CTGA-TGGCACA--G-GAGAACAAATTA------AAGGc
gi|10 : aaag-T--TTACCCTT----G-CTG-C-CC-ACG--AAGTTG----T-ACA-GGTAGA----TCATG--CTTA-TGCGAA--AAAGAA--GGCA-C-CTATAGG--TACA-AA------CAATTG--A-TTTTT-CAT--CAGC----AC---------CTAT--Aggaaaagcagcacatgtaaaaagattagttcaactgttttaagattctaccaaggggaggtaataatttgcagttaatattatgtaaattt
gi|44 : aagggtcctccagtgtcgtggctattcttgagtaattctatctcgagacaaagaagattttcacttcaaagtattgtaactctaatgtaatttcgcagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattgTA-TGCGAAA--AAGA--TGGAA-CATC-------TATGTAG------CAATTG--A-TTTTT-CAC--CAGC----AC---------CTA---------------CGTA-T-T-GAC-------CC--TTCTA-------TTCTATAT----TTACATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggacctgttcaccaaactacgacagtactattgatcggcctacagaatcagttgggtaatt
gi|53 : tgcttaaA-TGCGAAA--AAGA--TGGCA-C-CTA------TACA-AGTAAAAGCAATTG--A-TTTTT-CAT--CAGC----AC---------CTA
gi|14 : G------TAATTG--A-TTTTTTCAT--CA------GCACGGC----CTAT--ATATACGGGA-TCGTG-AGC-GAA-TTT-G-AC--GTCGACCGTTTCTTCTATATAAATTTACATTATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTA---------AC-T-GTTCACCAAATTCAC---GAACC-TT-CATTA--GA---T-GGCCTACAGAATCCCCGGGACAGGAATCAGTCGGGTATT--T-TTTTT--TTTTTTTTTTTTATACTGGCA-TAAGT-A-ATAA-GCAA--------AA--T-A--TGAAC-G-A---TTCTTTTCAA-TGAACA--TTTAAATGAGCGACATGCTGTGATTA--AGTGACTATTTGTGGGCA--TCTGT---ACAGTGACGTGATCTGTATTACGTTTACAGTGTTTCTAAGCTAGT-A-C-----GCACGGCA-
gi|25 : --TTCTA-----T--TCTATAT----TTACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAC-----C-T-GTTCACCAAA----C---CA--CGAC-TA-TA--GA---TCGGCCTACAGAATC---------------AGTTGGGTGAT--T--TTTT--TTTT--------GCACCTGTATTAAATCACATCA-GCAA--------A-----AAAT-AACGG-A---TTA-TTTCAATTAAA-AT-T--AAAT-AGCGAAATGCT-TGATTacaggcgtattgctcaggacag
gi|10 : ccgGGACCT-GTTCACCAAA----CTACGA--C-AG-TACTATTGA---TCGGCCTACAGAATC---------------AGTTGGGTAAT--T-
gi|5 : aagggtcctccagtgtcgtggctattcttgagtaattctatctcgagacaaagaagattttcacttcaaagtattgtaactctaatgtaatttcgcagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattgtttacccttgctgcccacgaagttgtacaggtagatcatgcttatgcgaaaaagaaggcacctataggtacaaacaattgatttttcatcagcacctatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaC-T-GTTCACCAAA----C---TA--C-GGCTA-TA--GA---TCGGACCACAGAATC---------------AGTCAGGTAATATT-TTTTT--TTTT--------ACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATAAAC-A-AAA-TTCTTTTCAAATGAA-A--TT-GAATGAGCGACAAGCT-TGATTT--A--GACTATTCAT--GCA--TCTTT---A---TTA--AGAT----------TTTACAGTGTTCTTA----AGT-ACC-----GCAC-GCACCC-TATCCGCCC-AGGA-CGT--ATTG-----CTAGTACA--GTA-A--CTACATTAATCAAATTAATGACAGGCGAAG--TA--AAT-GGAAATG
gi|4 : tgacgtaatttgaaaagttacattattttacatctcgttctaataaaaaaactcataaaccataaagcgtgaatgagaaatcccgagataagaacgggcgatcaataagtgaaaaacaataaaaaatgacggctacgattgttattgtttacccccgggtgtttaccctttaatactgtcccacgaagttgtaaaggaagatcatgcttgtgcgaaaaaagatggcacctctatagctacaagcaattgatttttcatcagcaccggcctataannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcacTCACCAAA----C---TA--CGAC-TA-TA--GA---TCGGCCTACAAAATC---------------ACTCGGATAATA-T-TTTTT--TTTT--------ACACCTGTACTAAATCACATAA-GC----------AATTT-AAATGAACGG-A---TTCTTTTCAAATGAA-AT-T--AAATAAGCAACATGCT-TGATTT--A--GACTATTCGT--GTA--CCTTT---A---TAA--TGAT----------TTTACAGTGTTCTTC----AGT-ACC-----GCAC-GTA-CCAAATCCG-CC-
gi|32 : taagggtcctccagtgtagtggccattcttgagtaattatatctcgagacaaaggagattttcactttcaagtattgtaactcctatgtaatttggcaagagttaatgttctttcatatgcactcttcatacatgaagatattaaaagactcatcaaccatggtgaagataaacgaaagcctgaatgagaaataccgagataagaaagggcgatctaaaagtgaaaaaacagagctctaaaagatctataaaccacaatgacggctgcgattgttattgtttacccttactgccccacgaagttgtaaaggtagatcatgcttatgcgaaaaagatgacacctctacaagtgattgatttttcatcagcacctacatataggagcttatcacgaattggccctttctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAGTATC---------------AGTCGGGTAAT----ATTTTGTTTTT--------GCACCTGTACTAAA-----------------------------ATGAACAG-A---TCCTTTTTAAATCAA-T--TT-AAATAAGTGCCATGCT-TGATTA--A--GACTATTCGT--ACA--TTTTT---A---TGA--GGAT----------TTTACAGTGTTCTTA----TGT-----------ACTGCA-Cca
gi|6 : caGTA-TAAATTAAATAACGCAA--------AAATTGAAAT--AC-G-GATTCTTCTTCCAAATAAA-T--T--AAA--GACAATATGCT-TGATTTTCA--GACTACATGT--ACAATTCCTG---A---TCA--TGAT----------Tg
gi|40 : ttaagggtcctccagtgtcgtggccattcttgggtaattttatctcaagacaaagaagattttcacttcaaagtaatgtaactcctatgtaatttcgcaagagttaatgttcttagtatgcactcctcacagacagaagataataaaaggctcataaaccatggtgaagataaacaaaagtttgatgagaaatccgaataaagaacgcgacgatctataagtgaaaacaacaaaagatcaaaaccaaatgagcacatgttattgtacccttaactgcatcacgaagttgtaaggtatatcattgctatgggaaaaaagatggcacctctacaaacaattgatgtttcatcagcaccggcctatataaggtcgtgaacagaattgtacctttctatcccaaataaaatttaccccccattcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtgaatcaacctttccaccaaacctactcgctatagaacagtcggtagT-AAATGAAC-GGA---TTCTTTTCAAATAAA-AATT--TAATGAGCAACATACT-TGATTT--A--GACTATTCGT--GCA--TTCTTATGA---TTA--TGAT----------TTTACAGTGTTCTTA----AGT-A-C-----aacacatttgcagt
gi|22 : ATTCGT--GCA--TCTTA---A---TTA--TG-T----------TTTACAGTGTTC-TA----AATTA-CC----GCAC-GCA-CCCTATCCG-CCCAGGG-CGTA--TTGC----------CA--GTACA--GTA-ACTA----CAGTAATGACAGGTGAAG--TA--AAT-GAAAGTGCACGTGAAAATACA-T-ACTGTATTGAA-GGTATCAAATATAAT-----T-ATGTTT-GACTTTCTTT--T---ATGTG-ATATTACAAAATAAGT-------AT-T----TA--------------TAAACTCCATGTAT-TATc
gi|42 : GCA-CCCTATCCG-CCCAGGA-CGTA--TTGCTA---TAGTACACTGTA-ACAGTA-ACTA----CATCAATGACAGGCGAGG------AAT-GAAAGTGAACGTAAAAATACA-TAA-TGTaaagc
gi|3 : cCTAGTACA--GT-------A-ACT----ACATTTAT-----GCGAAGGTTACCAAT-GAAAGTGGACGTGAACATACATT-A-TGTATTAAA-GGTATGAAATAT--------T-ATG------CTTTCTTT--T---ATGTG-AT-ATACAAAATAAGTAG-----ATATATTACATGCA--A----TTATAAACTCCATGTATAAATACTAAGCACAGCTTCA-TAGCAT-AAACTTT-GAAAAGAA-AA-TATA-G---T----ATCTGA-TTTTCATCTCTG-AGTAAATT----AAT-T-ACACATGTTGC-AGTAC--TT-AGTCA--A--ATCACTGTAAATGCAATTA--TTTGTATGT----AGGTTTAA-TAAAA---TGA-TT--AAGCTTTGATTAAT------ATGTATTTGAACAG-AT-A-----------AT-AACTGGAA--A--GAA-AGTC-GTCGTATATATTG---TATTGGGGA-TCTTAGCC---GAACAGCT-C-TACAGA-GGATGCTCATCA--TGTCAC-CAGCC-ATTA-CA-----TTTGAT-----TA--ATTG-TGTAG-AT----GAATA-ACAT-TTT--GGTTTGGGG--TC-G--CTC-TTAGAATAACATGGTCCAATTGTAAAAATGTTACCTAA-GT-ATCA-T-CAG-GGAAA-AGGCATTCC-AGTACC-T--A-TGGCACA--G-GAGACC-AATTAAAGGGCAAAGCATGCAC
gi|8 : tgATCAATGACAGGCGAAG--TA--AAT-GAAAatgtaaccatttttaagattctgcaaaggggggtaattaaatttgcaggtaatattatgttggttttttccctcattcttcaaaattcaccagcaaaaaaaaataaattcta
gi|11 : gttcctctagttgtcgtggccattcttgagtaatttatctcgagacaaagattttcacttcaaagtattgtaatcactatagtaatttcgcagagttaaatgttcttagatgcactcttcatacatagaagataataaaaagctcataaaccatggtgaagataacaaagagtgaatgagacatcccgatataacgggcgatcttaagtgaaaagcaacgaaaccagaggcttaaaccacaatgacagctacgattgttattgctaattactcttactgccccacgaagttgtaaaggcagatcatgcttatgcgaaaaagatggcacctctacagcaattgatttttcaccagtacctannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagcacctgttcaccaaactacgactacagatcggcctgcaggatcagtcgggtaatttttttttacacctgtaatgaattacataATGACAGGCGAAG--TA--AAT-GAAAGTAAACGTGA----------------------------AAATATAAT-AAA-TTATGT-TAGACTTTCTTTTATGTAATA-------TACAAAATAAGTAG-----ATAT----TATATGTAA----TTATAAACTCCATGTAT-AATACTAAGCACAGCTTTA-TAGCAT-AAACTTT-GAAAAG-A-AA-TATAGC---C----ATCTGA-TTTTCATCTCTG-AGTACATT--------T-ACACATGTTGC-AGTACGTAC-AG---------TCAC-----ATGCAATTATTTGT--ATGT----ATGTTT-AAT-AAACAATTAATT--AAGCCTTGATTAAT------ATGTATTTG-ACAG-AT-AATTCTCGAAGCATAAACTGGAA--A--GAA-GG-CCGCCGTAT-TATTGTA---TTGGGGA-GTTTAG-CC--GAACAG-C-TCTACAGAAGGATTCTCATCAGATATCATTAAGCCCATTGCT------TTTGAT-----AA--A-----------------------CA--TTT--GGTTTGGAT--CC-GCTCTT-TAGGTATAGCA-G-TCCAATT-TGAAAA--TTACCCAAGGT-ATCA-T-CAG-AGCGAAAAG-----CTAGTA-CAT--ATTGC-ACA--GCGAGA
gi|29 : ACGTGAAAATACA-T-A-AGTATTAAAAGGTATGAAATATCATGAAA-T-ATGT-TAGACTTTCTTTTATG-AATACGGAT-TTGCAAAATAAGTAG-----ATATTAC-TATGT---AACTTTT-TAAACTCCATGTAT-AA---TAAACACGGCTTTA-TAGCATAAAACTTT-GAAAAA-A-AGTTATC-CCGGC----ATCTAATTTTTCATCT
gi|43 : -A-AA-TATA-C---CC---ATCTGA-TTTTCATCTCTG-ATTACATTTAAAA---TTACACATGTTGC-AGTACGTTC-AGTCC--A--GTCACTGTAAATGCAATTATTTTTT
gi|14 : CTG-AGCA--------A---T-ACGCCTGTTGC-CGTGCGTACTAGCTT--AGAAACACTGTAAACGTAATat
gi|7 : gtaattgattttttcatcagcacggcctatatatacgggatcgtgagcgaatttgacgtcgaccgtttcttctatataaatttacattattagaatagggggacgtgtaaaagcaaaaaaaaaaaacaccttggagccggtaactgttcaccaaattcacgaaccttcattagatggcctacagaatccccgggacaggaatcagtcgggtattttttttttttttttttttatactggcataagtaataagcaaaatatgaacgattcttttcaatgaacatttaaatgagcgacatgctgtgattaagtgactatttgtgggcatctgtacagtgacgtgatctgt---T-ACACATGTTGC-AGTACGTAC-AGTCA--A--ATCATTGTAAATGTAACT-TGTATTTAGATT-TAA--------T-AAA---TGA-TT--ATGCTTTGATTAATATGTACATGTATTTG-ACAG-ATAA-TTATCGAAGCAGAAACTGGAA--A--GAA-GGAC-GTCGTAT-TATTG---TATTGGGGA-TTTTAGCC---GAACAGCT-C-TACAGA-GGATACTCATCA--TGTCAT-CTGCC-ATTG-CA-----TTTGATATTAGTA--ATTATTGTAG-AT----GAATA-GCAT-TTT--AGATTGGGA--TC-G-CTCT-TTAGTATACCATGCTCCAAgacag
gi|46 : ttaatAT-GATTGTA---TTGGGGA-TTTTAGCC---GAACAGCT-C-CACATA-GGATGTTCATTA--TGTCAT-CAGCC-ATTG-CA-----TTTGAT-----TA--ATTG-ccatttaagggggaaagcatgtacatgcaaaaagattagtccagctgtttttaacctttttttagattctggaaatagagataattaattttgcagctaatattatgtaaatttcattttccctcattcttcaaaattcaccagcaaaaattaaattctaattgatatattttatacatatactaattactattacatgtacatgtatgttaaaatttgaaacaaaattttgtagttattattttgtttttcatttttgtaatatatatgcattgcattttttttatatatgtctgatatgttttatatttatttt
gi|58 : ttGGA-TTTTAG-CCGAGAACAG-C-TCTACAGA-GGATGCTCATCA--TGT
gi|48 : -C---GAACAG-C-TCTACATA-GGATGCTCATCA--TGTCAT-TAGCC-ATTG-CA-----ATTCAT-----TA--ATTG-TGTAG-AT----GATTA-GCA--TTT--
gi|37 : agcGATGCTCATCA--TATCAT-CAGCC-ATTG-CATTGCATTTGAT-----TATAATTG-TGTAG-ATCTATGAATA-GCA--TTTTTGGTTTGGGA--CC-G-CTCT-TTAGTACAACATGCTCCAATTGTAAAt
gi|36 : ------TTTGAT------A--ATT--TGTGGTAT----AATCA-GCA--TTTTGGGTTTGGGA--TTTG-T-TC-TTAG-ACAACAT--CCCAATGGTAAAAAAATTACCCAA-G--ATCATT-CAGTGGGAAAAGG-----C-A
gi|21 : tcgttgcaTAC-AT----GAATA-ACA--TTTT-GAGTTGGGG--TC-G-CTCT-TTAGTATAACATGGTCCAATTGTAAAAATGTTACCCAA-GTAATCA-T-CAG-GTA---AGGCATTCC-AGTACC-T--A-TGGCACA--G-GAGACC-AATTAAAGGGCAAAGCATGCACt
gi|55 : -ATCA-T-CAG-GGAAA-AGG-----C-AGTA-CCT--A-TG--ACAAAG-GAGATC-AATTA------AAAGCATGCtgtccatttttaagacacttgcaagggaggtaattaaatttgcaggtaatattatgttgggtttttttttttgcccattcttcaaaaattcaccagaaaaaaattaaattctaa
22 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|9 ): ATGCATGTAAAAAGAATTAGGTTCTGTTTGTAACCATGTTTTAGATTCTGCAAAGGGAGGTAATTATTTTTGCAGCTAATATTTATGTAATTTTATTTTTCCCCATTCTTCAAATTCACAGCAAAAAATTAAATTCTAATGTGATATATTTCATACATTCTATTACTATTGATGTTAAAATTTGAACAAAATTTGTGGTATATTATTTTTTTTTTTATTTTCATTTTTGTTATAATATATGATATCGCATTTTTTTTTAAATATTCTAATTTTTTATTTAAGTTTTATTTGGTTATTGATGGGTTTTTATATTTGATATATCATTAATTATTGTATTTCTAGCCATTTCTTTGTTTTTTTGTATTTAAATTGTTTTGTTTGTTTCATGCAACATTAATGTGCAATGACATTAGAAGTAATAAATCATAAAATATATGCTAATTTTGTTATTGTCTTTGATGTTAAATTATGTTATATGGTATATTCAACAGCCTGCTGTTGTTTATGATTTTGGGACTTAAAACTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|12 ): TTTTTTTCCCCATCCTTCAAGATTCAACAGCAAAAAAAATAATAAATTCTAATTGATATATTTATAAATATACTGATTACCATTATGTTCAAATTTGAAAAAAATCTTGTGGTTATTATTTTTTTAATTTTCATTTTTGTTATATATATGAATTGCATTTTTAAAAAATATTCTGATAATTTTTATATTTATGTTTTGCTATTTGGTTTTGATGGGTTTTTTATTTGATATATTATTGTTGTTATGTATTTTGCCTATTTCTTTATTTGTTTTGTATCTAAATTGTTTTTGTTATGTGTTCATGCAACATATGTGCAATAACATTACAAGTAATAAATCATAAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTATATGATTATGCCAAGTAACCATGCTAGTTTTATGAATTTTGGAAAAACAATTGGTTGACC
Unaligned ( gi|17 ): TTCTAATTGATATATTTATACATATATACTGATTACCTTTATATTTAAATTTGAACAAAAATTGGTCATTAATTTTTTTTAATTTTTGTTATTATATATTGAATTGCATTTTTAAAAAAAATGTTCTCATATTTTTGATATTTTATGTTTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCGACATGTATTTATTTTTTATTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATTATGTGCAATAACATTAGAAGTAATAAATCATAAAAAAATATGGCTAATTTGTT
Unaligned ( gi|18 ): TTAATTTTGATGGTTTTTTTTTTAAATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTTGGATTGTATTTAAATTTTATTGTTATGTGTTCATGTAACATTATGTGCAATAAATTAGAAATAAAATAAATAATAGAAAATATGGCTAATTTTGTTATTGTCTTTGGTGTTTAATTATGTATATATTATCCAAGTAACCATCTGGTTTTATTGTTGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTTAA
Unaligned ( gi|19 ): TAATTTTGATGTTTTATTTTTTTAACATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTGGATTGTATTTAAATTTTATTGTTATGTTTCACTAGTAACATTAGGTGCAAGTCAACAATTAAAATAAAATAAATAATAAAAATGCTAATATTGTTATTGTCTTTGGTGTTGAAATTATGTATCATGATTACAAGTACATCGCTGTTTATAATTGGAGGGGGGGGCTTAGGATGACCCTTCACCTCCTTA
Unaligned ( gi|20 ): ACATATACATATTATGTTAAAATTAAAAAAAATGTATTGTTGTTATTATGCTTTTTATTTTCATTTTTGTTATAAATATAAATTGCATTTTTTTAATATTCTATTTTTTATATTTAAATTTTGTTATTTAGTTTTGATGGGTTTTTTTTATTTGATATATTATCATTGCTATGTATTTTGTCTATTTCTTTCTTTGTTTTGTATCTAAATTGTTTTTGTTGTGTGTTCATGTCTCATTGTGGGCAATAACATT
Unaligned ( gi|26 ): CTGATTACTATTAAGTGAAAATAAGAACAGAATATTGTGGTTATTATTATAATTTTTTTTTTCATTTTTGTAATATATATGAATTGCATTTTCTTTTCCTTTTTATATTCCTATAGTTTTGATTTTTTTTTATTTGGTTTAATGGGTTTTTTTTTTATTGATATATTATTTTTGTTAAGTATTTTGCCTATTTCTTTGTTTGTTTTGTA
Unaligned ( gi|27 ): TTGTTATTGATTTTGGTCGGTTTTTGTTATTTGATATATTATCATGTTATGTATTTTGCCTATTTCTTTTTCTTTTGTTTTGTATTTAAATTGTTTTGTTATGTGTTCATCTAATATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAACTGTGTTACTGTCTTTGACGTTAAAACTATGTATATG
Unaligned ( gi|30 ): ATTTCTTTATTTGTTTTGTATGTGTTCATACAACATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTAAAGGTAGAAGCCAAGTAACTATGCTAGTTTTATGAATTTTGAAGAAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|31 ): TTAGCTCAGCTGTTTGTAAGAATTTTTGTTTAGATTCTGCTAAGGGAGGTAATTAATTTTGCAGCTATGATTATGTAAATTTCATTTCTTCCCCATTCTTCAAAATTCACCAGCAAAAGAAAATTTAAATTCTAATTGATATATTATATAT
Unaligned ( gi|34 ): TTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCTACATGTATTTATTATTTGTTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATNNNT
Unaligned ( gi|38 ): TTTGCCTATTTCTTTGTTTGTTTTGTATTAAAATGGTTTTTGTTATGTGTTTATGTAGCATTATGTGCAATAACATTAGACGTAAAATATGGCTAATTTTGTTATTGTCTTT
Unaligned ( gi|39 ): ATGTGCAATAACATTAGAAAGTGTTACTGTCTTTGATGTTAAAATTATGTATATAATTATATCAAATTTATGAATTTTGGAGAGAAAAACTTGATGACCCTCCAGCATTCTT
Unaligned ( gi|41 ): ATTGTGTTACTGTCTTTGATGTTGAAATTATGTATATGGTTATGCCAAGTGACCATGCTAGTTTTATGAATTTTGGAAAAATAATTGGATGACCCTCCAGCCTC
Unaligned ( gi|45 ): CGTGTAACAAAGATAATGTTCAGCTGTTTTACTGCTTTTAGATTCTCCAATAGGAGAAATTAATTTGCAGCTAATAATTAGTAAATTTTT
Unaligned ( gi|47 ): GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|49 ): AACCATGCTAGTTTTATGCTTTTTTCGAGGGGAGGGGGGGGGGGGGGGCGACCCTCCTGCCTCCTT
Unaligned ( gi|50 ): GTAACCATGCTGGTTTTATGAATTTGGGAGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|51 ): GTAACCATGCTAGTTTTATAAATTTTTTTGGGGGGGGGGGAAATGGATGACCATCCGGCCTCCT
Unaligned ( gi|52 ): CAAGTAACCATGCTAGTTTTATGAATGGGGGGGGGGGGATGGATGACCCTCCAGCCTCC
Unaligned ( gi|54 ): TAATCATGCTAGTTTTATGAATTTTGGATAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|56 ): GCTAGTTTTATGAATTTTGGGGGAAAACTTAGATGACCCTCCAGCCTCCTTA
Alignments
lowQualScore : 222222 111 11111111 111111 22222222222222 1111 1 1 111 1 222222222 44444444 11111 111 1111111 1111 1111111 33333333333 222222222222222 333333333333 22222222222222 111 111 1111111111 2222 22222 44444444444444444 1111 1 3333333 11111 4444444444444444 1111 11111 1111 33333333 11 2222 2222 222222 11 111 222 33 2222 11111 11111 11 33333333 2222222
lowQualScore : 3 3 3 666 55 3 3 3 3 3 88 3 3 55 3 3 55 55 88 1 3 3 3 88888 3 555 6 3 3 3 3 3 7777 3 3 3 55 3 3 3 3 44 3 44 7777 55 88 999999 3 4 3 55 3 3 3 000 4 4 0 4 4 0 0 55555555 7777 4 55 4 4 4 55 4 000000 11111111111111 1111 8 3 55 7777 4 3 7 55 3 55 222 1 3 44 999999999 3 888888 44 3 3 44 00000000 55 22222 11 4 8 4 55 111 88 4444444 0000 5555555 44444444444 5 5 4 5 66 66 66 8 66 777 555555555555555 666666666666 2 5 1 1 8 11111111111111 1 444 66 66 1 4 8 4 4 888888 66 66 333 777 1 66 9999999999 5 3333 5 5 5 4 0 0 77 88 99 55555 77 88888888888888888 888888 5 6666 1 6 1 7 99 3 88 7 6666666 66666 9999999999999999 3 6666 8 8 8 6 6 66666 4444 6 8 5 88888888 6 6 6 44 9 7 3 4444 0 5555 8 3 333333 8 8 0 0 66 11 444 8 222 6 6 00 5 66 8888 5 66 66 11111 11111 66 44 4 9999 4 7 66 5 4 66 5 0 5 7 6 5 5 5 5 44 99999999 6 6 6 4444444 0
lowQualScore : . . . ... .. . . . . . .. . . .. . . .. .. .. . . . . ..... . ... . . . . . . .... . . . .. . . . . .. . .. .... .. .. ...... . . . .. . . . ... . . . . . . . ........ .... . .. . . . .. . ...... .............. .... . . .. .... . . . .. . .. ... . . .. ......... . ...... .. . . .. ........ .. ..... .. . . . .. ... .. ....... .... ....... ........... . . . . .. .. .. . .. ... ............... ............ . . . . . .............. . ... .. .. . . . . . ...... .. .. ... ... . .. .......... . .... . . . . . . .. .. .. ..... .. ................. ...... . .... . . . . .. . .. . ....... ..... ................ . .... . . . . . ..... .... . . . ........ . . . .. . . . .... . .... . . ...... . . . . .. .. ... . ... . . .. . .. .... . .. .. ..... ..... .. .. . .... . . .. . . .. . . . . . . . . . .. ........ . . . ....... .
lowQualScore : 6 6 6 444 00 3 6 6 6 6 66 6 6 00 6 6 00 00 66 0 1 1 1 22222 1 444 7 3 3 6 6 6 7777 3 6 6 00 6 1 1 1 66 3 66 7777 00 66 111111 6 3 6 00 6 7 3 444 0 0 6 0 0 8 8 33333333 7777 0 55 0 0 0 55 0 444444 44444444444444 4444 2 6 00 7777 5 6 3 55 6 00 555 4 3 66 000000000 3 888888 22 1 3 66 88888888 55 99999 66 0 0 0 22 000 66 7777777 6666 9999999 77777777777 0 0 4 3 11 11 11 4 11 888 000000000000000 111111111111 4 7 9 1 9 66666666666666 6 000 11 11 9 4 9 4 4 222222 11 11 999 888 0 11 4444444444 0 1111 7 0 7 3 3 7 99 33 22 00000 99 33333333333333333 111111 7 7777 5 7 0 5 88 3 33 3 2222222 77777 0000000000000000 5 0000 0 0 0 7 7 77777 2222 7 0 0 66666666 7 7 7 22 8 5 2 6666 8 0000 0 8 000000 0 0 8 8 22 00 000 0 000 7 7 77 0 99 0000 0 11 99 11111 11111 11 66 4 4444 4 3 99 0 0 99 0 4 6 5 7 7 7 7 7 77 55555555 7 7 7 2222222 8
consensus : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCC-CCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACC-T-C-----TACA-AG------CAATTG--A-TTTTT-CAT--CAGCAC-----GCCTAC--AT-AG--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTATAT----TTACATTATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGCGA--GCA-C-T-GTTCACCAAA-CTACGA--C--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--TTCT--TTTCAAATGAA-A-TTAAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGT--ATTGCT--A-CTAGTACA--GTA--A-TA-ACT-AAC---ATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATCAT-AAAT-ATGT-TAGACTTTCTTTTATGTGATAC-G-TTTGCAAAATAAGTAG-----ATAT----TATGT---A---TTATAAACTCCATGTATAA-TACTAAGCACGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTACAG-TCA-AATCACTGTAAATGCAATTATTTGTNTATGTT---AGGTTTAATAAA----TGATT-AAGCTTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-G-CCGTCGTAT-TATTGT-AT--TGGGGATTTT-AGCCGA--ACAGCTC-TACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--TC-GCTCT--TTA-GTATAACATGCTCCAATTGTAAAAATGTTACCCAA-GT-ATCA-T-CAG-GG-AAAAGG---C---CCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
Reference ( family-1351 ) : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GCAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTG-C-CCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACC-C-T-----TACA-AG------CAATTG--A-TTTTT-CAT--CAGC-------GCCTAC--AT-NG--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTATAT----TTACATTNTTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGCGN--GGA-C-T-GTTCACCAAA-CNACGA--C--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--TTCT--TTTCAAATGAA-A-TTAAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TNA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGT--ATTGCT--A-CTAGTACA--GTA--AGTA-ACT-AAC---ATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATNAT-AAAT-ATGT-TAGACTTTCTTTTATGTAATAT-GATTTACAAAATAAGTAG-----ATAT----TATGT---A---TTATAAACTCCATGTATAA-TACTAAGCACGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTACAG-TCN-AATCACTGTAAATGCAATTATTTNTNTATGTT---AGGTTTAATAAA----TGATT-AAGCTTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-G-C-GTCGTAT-TATTGT-ATATTGGGGATTTT-AGCCGA--ACAGCCCCTACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--CC-GCCCT--TTA-GTATAACATGCTCCAATTGTAAAAANGTTACCCAA-GT-ATCA-T-CAG-GGAAAAAGG---C---TCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
gi|1 : AAGGGTCCTCCAG-T-GTCGTGGC--AT---T---TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGA---GATTTT--A-CT-----AA-AG--TGTCGT--AACT--CTAA-T-GTAAT-TTCG--A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GC--CT--C-TTCA-A-CA-T-AGAA--G-AT--AATA----A--G--A------CTC-ATAA-CCAT-GGTG--A-G-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-ACGAACG-GGCG-ATCTATAAGTGAAAAA--ACA-------AAA-----TAT-C--TAAA---AC-AATGA--GACT--AC-GATTGTTATTAGTT---TTA--------------CCCTT----ACTG-C-CCACG--AAGTTG----T-A-A-GGT--ATTTCA-TG--TTTA---TGCGAAAGAAAGACGTGGCACT---T-----TACA-AG------CAATTG--A-TTTTT-CAT--CAAT---------CTAC--AT-CG--GGGCTCGTG-A-C-GAC-TTG-G-CC--TTCTA-----TCTTCTATAT----TTACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGA-C-T-GTTCACTAAA-CGAC-A--G--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TATTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--CTAT--TTTCAAATGAA-A--TAAA-TGAACGACATGCT-TGATTT--A--GATTATTTGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCATAAG-TA-C--AC-ACTGC-A-CCTATCCG-C--CAGGA-CGTAAATTGCTAGA-CTAGCACA--GTA--AGTA-ACTAAAC---ATTAATGACAGGCGAAG--TA--AAT-GGAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATCAT-AAAT-ATGTGTAGACTTTC-TTTATG-AATAC-GATTTGCAAAATAAGTAG-----ATAT----TATGT---A---TT-TAAACTCCATGTATAA-TTCTAAACAGGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA-----CCAT----CTAA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTTCAG-CTC-AATCACTGTAAATGCAATTATTTTTTTATGTTCTAAGGTTT-GTAAA----TTATT-AAGC-TTGATTAAT------ATGTATTTGA-CAGA-T-ATTCTCAAAGCATAAACTGGAAATCGA---AG-G-C-GTCGCAT-TATTGTAATATTGGGAATTTT-AG-CGA--AAAG--TTTACAGA-GGATGCTCATCA--TATCATAAG--CCATGGT-TT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCA--TTTGGTTTGGGA--TC-GTCTT--TTA-GTATAGCATGCTCCAATTGTAAAAATGTTACCCAA-GT-ATCA-T-CAG-GGAAAGAGG--------CAGTA-CT-ATGG-ACAG-GAG-ATCAATTA-------AAAGCATGCAC
gi|10 : AAGGGTCCTCCAG-T-GTCGTGGCT-AT---TC--TTG-AGTAA-TTCT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TATTGT--AACT--CTAA-T-GTAAT-TTCGC-----AG-A---Gg
gi|10 : ATTG--T---TTA--------------CCCTT----GCTG-C-CCACG--AAGTTG----T-ACA-GGT--AGATCA-TG--CTTA---TGCG-AA-AAAGA--AGGCACC-TATAGG--TACA-AA------CAATTG--A-TTTTT-CAT--CAGC-------ACCTAT--AN-NN--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNNNN----NNNNNNT-------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA--GGACC-T-GTTCACCAAA-CTACGA--CAGT--ACTATTGA---TCGGCCTACA---------------GAATCAGTTGGGTA--------AT--Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattgtttacccttgctgcccacgaagttgtacaggtagatcatgcttatgcgaaaaagaaggcacctataggtacaaacaattgatttttcatcagcacctatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggacctgttcaccaaactacgacagtactattgatcggcctacagaatcagttgggtaatt
gi|11 : aagggtcctccagtgtcgtggctattcttgagtaattctatctcgagacaaagaagattttcacttcaaagtattgtaactctaatgtaatttcgcagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATGACAGGCGAAG--TA--AAT-GAAAGTAAACGTGAAAATA---------------------------TAAT-AAATTATGT-TAGACTTTCTTTTATGTAATAT------ACAAAATAAGTAG-----ATAT----TATATGTAA---TTATAAACTCCATGTATAA-TACTAAGCACAGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT--------T-ACACATGTTGCA-GTACGTACAG-TC------AC-----ATGCAATTATTTGTATGTAT------GTTTAATAAACAATTAATT-AAGCCTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-G-CCGCCGTAT-TATTGT-AT--TGGGGAGTTT-AGCCGA--ACAGCTC-TACAGAAGGATTCTCATCAGATATCATTAAGCCCATTGCTTT-----TGAT-----AA--A-----------------------CATTT--GGTTTGGAT--CC-GCTCT--TTAGGTATAGCA-G-TCCAATT-TGAAAA--TTACCCAAGGT-ATCA-T-CAG-AGCGAAAAG---C---T-AGTACAT-ATTGCACAGCGAG-A
gi|13 : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-ATAAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TCAAA-AG--TGTCGT--AACT--CTAT-T-GTAAT-TTTGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CTCCC-TTCATA-CA-T-AGAA--GCAT--AATA----A--A--AG-----CTC-ATAACCCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAC-GCGAACG-GGCGAATCT-TAAGTG-AAAACAAC--------AAA----AGATCC--TACACGCACAAATGACAGACTTAACGGATTGTTATTG--T---TTA--------------CCCTT----ATTG-C-CCACG---AGTTGTAATT-A-A-GGT--CATTCA-TGGTTTTAT--TGCGAAA-AAAGA--TGGCACC-T-T-----TACA-AG------CAATTG--ATTTTTT-CATCGCAGT-------CCCTAC--ATATG--GGGCTCGTG-A-C-GACTTTG-GCCC--TTCTA-----TCTTTCATA
gi|14 : tG------TAATTG--A-TTTTTTCAT--CAGCACG----GCCTAT--AT-ATACGGGATCGTG-AGC-GAA-TTT-G-AC--GTCGACCGTTTCTTCTATATAAATTTACATTATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTA---------A-C-T-GTTCACCAAATTCACGAACC--TTCATTA--GA---T-GGCCTACAGAATCCCCGGGACAGGAATCAGTCGGGTATTTTTTTTTT--TTTTTTTTTTATACTGGCA-TAAG-TA-ATAA-GC-A--------AAAT----ATGAAC-G-A--TTCT--TTTC-AATGAACATTTAAA-TGAGCGACATGCTGTGATTA--AGTGACTATTTGTGGGCA--TCTGT---ACAGTGACGTGATCTGTATTACGTTTACAGTGTTTCTAAGCTA----GT-AC-GC-A-------CGGCAACAGG--CGT--ATTGCT-----CAGGACA--Gaattt
gi|15 : ATA-CA-T-AGAA--G-AT--AATA----A--A--AGA----CTC-ATAAATCAT-GGTG--AAG-ATAAAAAAAAAGCGT---GACTGAGAAAT-CCCGAGAT-AAGAACG-GGCA-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--TT-GATTGTTATTG--T---TTA--------------CCCCT----ACTGCC-CCACG--AAGTAG----TAA-A-GGT--GGATCA-TG--CTTA---TGCG-AA-ATAGA--TGGCACC-T-C-----TACA-AG------CAATTG--A-TTTTT-TAT--CAGCATCG---GCCTA
gi|16 : G-AGTAA-TTTT-A-TCTC-GAGATAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTAA-T-GCAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-AT--C-TTCATA-CA-T-AGAG--G-AT--AATA----ACAAT-A------CTC-ATAACCCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-ACGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-AGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTG-C-CCAAG--AAGTTG----TAA-A-GGT--TCTTCA-TG--CTAA---TGC-AAA-AAAGA--TGACACC-T-T-----TACA-AG------CAATTG--A-tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcacctgttcaccaaa
gi|2 : AA----AG-T-C--TAAAC--AC-AATGAC-GGCT--AC-GATTGTT-----------TA------------------T----GC---C-CCACGCTAAGTTG----T-A-AAGGTTAAGATCA-AG--CTTAA--TGCGAAA-AA-GA--TGGCACC-T-C-----TACA-AG------CAATTGCGA-TTTTT-CAT--CAGCACCACCGGCCTAT--AT-AG--GGGCTCATG-AAC-GAA-TTG-AACC--GTCTA-----T--TCTGT-T----TTACATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGA--GCA-C-TTGTTCATTAAA-CATGGA--C--T--ACTA--GGCCTTCGGCCTACA---------------GAATCAGTCGGGTA------------TTTTATTTTT-CACCTGTACTAA-TTACATAAAGCAA--------AAATT-AAATGAAC-GGA--TTCT--TTTCAA-TGAA-A-TTAAACTGAG-----------------------------GT--GCA--TCTTTGT-A---TTA--TGAT----------TGTA-AGT-TGCTTAAG-TA-CCGGTGAC-GCCACCCCATCTGCC--CAGGATCGT--ATTGCT--AGCCAGTAC---------------T-A-C---ATTAATGACAGGCGAAG--TA--AATCGAAAGTGAACGTGAAA-TACAT-A--------------ATAAAATATCAT-AAATTATGC-TAGACTTT-TTTTATGTGATAT-GCCTGGTGAA-TAAGTAGTGGTTACAT----TA------A---TTATAAACTCACTG-ATAA-TA----GCATGGCTTTATTAG-AT-AAACTTGAGAAAAAAGAA-TATA----GCCATGGATCTGA-TTTTCATCTCCACAGTA-ATT----AACTT-ACACATGTTGCAAGTACGTACAAATCATAATCACTGTAAATGCAATTATTTGTGGGTGGT---AGGTTTAATAAA----TGATTTCAGTTTTGATTAAT------ATGTATTTGA-CAGAATAATTCCTGAAGC-TAAACTGAAAA--GATCGAGTG-CCGTCGTAT-TATTGT-AT--TGGGGATTTTTAGCCGA---CAGCAT-TACAGA-GAATGC-CATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATACGAATTTTTGGTTTGGGAGTCC-GCTCTTCTTA-GTAT-ACATGC-CGAATTGTAAAGAAGTTACCCAA-TT-ATCA-TGCAG-G--AAAAGGTATT---CCAGTACCTGATGGCACAG-GAGAACAAATTAAAGGGGAAAAGCA-GCAC
gi|21 : TAC-AT----GAATA-ACATTTTGAGTT-GGGG--TC-GCTCT--TTA-GTATAACATGGTCCAATTGTAAAAATGTTACCCAA-GTAATCA-T-CAG-GT---AAGG---CATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCACatgtaaaaagattagttcaactgttttaagattctaccaaggggaggtaataatttgcagttaatattatgtaaattt
gi|22 : ATTCGT--GCA--TCTTA---A---TTA--TG-T----------TTTACAGTGTTCTAAAT-TA-CC-GC-AC-GC-ACCCTATCCGCC--CAGGG-CGT--ATTGCC--A----GTACA--GTA--A-----CT-A-C---AGTAATGACAGGTGAAG--TA--AAT-GAAAGTGCACGTGAAAATACAT-ACTGTATTGAA-GGTATCAAATATAAT----T-ATGT-TTGACTTTCTTTTATGTGATA-----TTACAAAATAAGT-------AT------------------TTATAAACTCCATGTATTA-TA--AAGCtgtccatttttaagacacttgcaagggaggtaattaaatttgcaggtaatattatgttgggtttttttttttgcccattcttcaaaaattcaccagaaaaaaattaaattctaa
gi|23 : AGGGTCCTCCAG-T-GTTGTGGCC-AC---TC--TTG-AGTAA-TTTT-A-TCTT-GAGACA---AA--GATTTTC-A-CC--TC-CA-AG--TATTGT--AACTG-CTT--T-TTAAT-TTCGA-G---AG-C---GTG-A-A-TG
gi|23 : ttgtCGAGA-GCGT---GAATGGGAAAT-CCCGAGAT-AAGAAAG-GGCG-ATTTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--GC-GATTGTTATTG--T---TTA--------------CACTT----ACCGCC-CCACG--AAGTTG----T-A-A-AGggaaatcccgagataagaaagggcgatttataagtgaaaaacaacaaaaagatctaaaccacaatgacggctgcgattgttattgtttacacttaccgccccacgaagttgtaaagc
gi|24 : ttgtagggtcctccagtgttgtggccactcttgagtaattttatcttgagacaaagattttcacctccaagtattgtaactgctttttaatttGGTCCTCCAGTT-GTCGT-GCC-A----TCGGTTGTAGTAAGTTTTAA-TCTCGGAGACAAAGAATTGATTTTCGA-GTTATC-AAGAG--TGTTGTTGTACTGCCTCA-T-ATAATGTTCGC-ATATAGTA---TTT-A-AGTGTGAC-TT-ACATTGCAT-GCT-CT--C--TCATAGCATT-AGAA--G-ATAAAACA----A--A--AATTGATCTC-AT-AACCAT-GGTGTCAAGTATAAAC-AAA-GCGTTGGGGATGAc
gi|25 : ta--TTCTA-----T--TCTATAT----TTACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAC------C-T-GTTCACCAAA-CCACGA--C--T--A-TA--GA---TCGGCCTACA---------------GAATCAGTTGGGTG--------A---TTTTTTTTTTGCACCTGTATTAAATCACATCA-GCAA--------A-----AAAT-AAC-G-G--ATTA--TTTCAATTAAA-A-TTAAA-T-AGCGAAATGCT-TGATT
gi|28 : ccgAAGGGTCCTCCAG-T-GTCGGTGCC-AT---C----TG-AGTAA-TTTT-AATCTC-GAGACAAAGAAT-GATTTTC-AGTT--TC-AA-AAGTTGTTGT--AACT--CTCAAT-ATAAT-TTCGCTA---AG-ATTTGTTTA-A-TGTG-A-TT-A----GCATTGCAGCT--C-TCCATA-CA-TTAGAA--G-AT--AAAACAAAA--A--A------CTC-ATAA-CCA--GGTG--AAG-ATAAACAAAA-GCGT---GA
gi|29 : tACGTGAAAATACAT-A-AGTATTAAAAGGTATGAAATATCATGAAAT-ATGT-TAGACTTTCTTTTATG-AATACGGATTTGCAAAATAAGTAG-----ATATTAC-TATGT---AACTTTTTAAACTCCATGTATAA----TAAACACGGCTTTAT-AGCATAAAACTTT-GAAAAAA-AG-T-TATCCCGGCAT----CTAATTTTTCATCT
gi|3 : T--G-CTAGTACA--GTA--A-----CT-A-C---ATTTATG-----CGAAGGTTACCAAT-GAAAGTGGACGTGAACATACATTA-TGTATTAAA-GGTATGAAATAT-------T-ATG------CTTTCTTTTATGTGATAT------ACAAAATAAGTAG-----ATATATTACATGC---AA--TTATAAACTCCATGTATAAATACTAAGCACAGCTTCAT-AGCAT-AAACTTT-GAAAAGA-AAATATA----GT-AT----CTGA-TTTTCATCTCTG-AGTAAATT----AAT-T-ACACATGTTGCA-GTACTTA--G-TCA-AATCACTGTAAATGCAATTATTTGT--ATGT----AGGTTTAATAAAA---TGATT-AAGCTTTGATTAAT------ATGTATTTGAACAGA-TAAT------------AACTGGAAA--GA---AA-GTC-GTCGTATATATTGT-AT--TGGGGATCTT-AGCCGA--ACAGCTC-TACAGA-GGATGCTCATCA--TGTCACCAG--CCATTACATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-ACA-TTTTGGTTTGGGG--TC-GCTC---TTA-GAATAACATGGTCCAATTGTAAAAATGTTACCTAA-GT-ATCA-T-CAG-GG-AAAAGG---CATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
gi|32 : ACA---------------GTATCAGTCGGGTA--------ATA-TTTTGTTTTTGCACCTGTACTAAA-----------------------------ATGAACAG-A--TCCT--TTTTAAATCAA-T-TTAAA-TAAGTGCCATGCT-TGATTA--A--GACTATTCGT--ACA--TTTTT---A---TGA--GGAT----------TTTACAGTGTTCTTATG-TA-CT-GC-AC-Gatgtaaccatttttaagattctgcaaaggggggtaattaaatttgcaggtaatattatgttggttttttccctcattcttcaaaattcaccagcaaaaaaaaataaattcta
gi|33 : caAAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-GT--TC-AA-AG--TGTTGT--AACT--CTCA-T-ATAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GCAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--
gi|35 : tATA-CA-T-ATAAATG-AT--AAAA----G--A--A------CTCCATAAATCATAGGTA--AAG-ATAAACAGAA-CCGTTT-GATTGAGAAATCCCCGATAT-AAGAAC--GGCG-ATCTATAAGAGAAAAACAACA-------AAA----AG
gi|36 : CGTTGCATT-----TGAT------A--ATT--TGTGGTAT----AATCA-GCATTTTGGGTTTGGGA--TTTGTTCT--T-A-G-ACAACAT--CCCAATGGTAAAAAAATTACCCAA-G--ATCATT-CAGTGGGAAAAGG---C---
gi|37 : tGATGCTCATCA--TATCATCAG--CCATTGCATTGCATTTGAT-----TATAATTG-TGTAG-ATCTATGAATA-GCATTTTTGGTTTGGGA--CC-GCTCT--TTA-GTACAACATGCTCCAATTGTAAAat
gi|4 : AAGGGTCCTCCAG-T-GTAGTGGCC-AT---TC--TTG-AGTAA-TTAT-A-TCTC-GAGACAAAGGA--GATTTTC-A-CT--TT-CA-AG--TATTGT--AACT--CCTA-T-GTAAT-TTGGC-A---AG-A---GTT-A-A-TGTT-CTTT-C----ATAT-GCA-CT--C-TTCATA-CA-T--GAA--G-AT--ATTA----A--AAGA------CTC-ATCAACCAT-GGTG--AAG-ATAAACGAAA-GCCT---GAATGAGAAAT-ACCGAGAT-AAGAAAG-GGCG-ATCTAAAAGTGAAAA--AACAGAGCTCTAAA----AGAT-CTATAAAC-CAC-AATGAC-GGCT--GC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCC-CCACG--AAGTTG----TAA-A-GGT--AGATCA-TG--CTTA---TGCG-AA-AAAGA--TGACACC-T-C-----TACA-AG------TGATTG--A-TTTTT-CAT--CAGC-------ACCTACATAT-AG--GAGCTTATC-A-C-GAA-TTG-G-CCCTTTCT
gi|4 : tTCACCAAA-CTACGA--C--T--A-TA--GA---TCGGCCTACA---------------AAATCACTCGGATA--------ATA-TTTTTTTTTTACACCTGTACTAAATCACATAA-GCAA--------T--TT-AAATGAAC-GGA--TTCT--TTTCAAATGAA-A-TTAAA-TAAGCAACATGCT-TGATTT--A--GACTATTCGT--GTA--CCTTT---A---TAA--TGAT----------TTTACAGTGTTCTTCAG-TACC--GC-AC-GT-ACCAAATCCGCC--CAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaccaaactacgactatagatcggcctacaaaatcactcggataatattttttttttacacctgtactaaatcacataagcaatttaaatgaacggattcttttcaaatgaaattaaataagcaacatgcttgatttagactattcgtgtacctttataatgattttacagtgttcttcagtaccgcacgtaccaaatccgccca
gi|40 : taagggtcctccagtgtagtggccattcttgagtaattatatctcgagacaaaggagattttcactttcaagtattgtaactcctatgtaatttggcaagagttaatgttctttcatatgcactcttcatacatgaagatattaaaagactcatcaaccatggtgaagataaacgaaagcctgaatgagaaataccgagataagaaagggcgatctaaaagtgaaaaaacagagctctaaaagatctataaaccacaatgacggctgcgattgttattgtttacccttactgccccacgaagttgtaaaggtagatcatgcttatgcgaaaaagatgacacctctacaagtgattgatttttcatcagcacctacatataggagcttatcacgaattggccctttctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnT-AAATGAAC-GGA--TTCT--TTTCAAATAAA-AATTTAA-TGAGCAACATACT-TGATTT--A--GACTATTCGT--GCA--TTCTTATGA---TTA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--
gi|42 : C-GC-ACCCTATCCGCC--CAGGA-CGT--ATTGCT--A--TAGTACACTGTAACAGTA-ACT--AC---ATCAATGACAGGCGAGG------AAT-GAAAGTGAACGTAAAAATACATAA-TGTc
gi|43 : A-AA-TATA----CCCAT----CTGA-TTTTCATCTCTG-ATTACATTTAAAA---TTACACATGTTGCA-GTACGTTCAG-TCC-AGTCACTGTAAATGCAATTATTT-TTTAT
gi|44 : -TG--CTTAATATGCG-AA-AAAGA--TGGAACA-T-C-----TATGTAG------CAATTG--A-TTTTT-CAC--CAGC-------ACCTAC--GT-A-------T--TG-A-C-----------CC--TTCTA-------TTCTATAT----TTACAT
gi|46 : TAT-GATTGT-AT--TGGGGATTTT-AGCCGA--ACAGCTCC-ACATA-GGATGTTCATTA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-
gi|48 : t-AGCCGA--ACAGCTC-TACATA-GGATGCTCATCA--TGTCATTAG--CCATTGCAAT-----TCAT-----TA--ATTG-TGTAG-AT----GATTA-GCATTTT
gi|5 : TGA-C-GTAAT-TT-G--A---AA-A---GTT-ACA-TTAT-T-TT-A-----CAT-----CT--CGTTC-------T-A-------AT--AAAA----A--A--A------CTC-ATAAACCAT------------------AAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCAATAAGTGAAAAACAATA-------AAA----A------------------ATGAC-GGCT--AC-GATTGTTATTG--T---TTACCCCCGGGTGTTTACCCTTTAATACTGTC-CCACG--AAGTTG----T-A-AAGGA--AGATCA-TG--CTTG---TGCGAAA-AAAGA--TGGCACCTC-TATAGCTACA-AG------CAATTG--A-TTTTT-CAT--CAGCACCG---GCCTAT--A--AN--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNNNN----NNNNNTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA--GCA-CCT-GTTCACCAAA-CTACGG--C--T--A-TA--GA---TCGGACCACA---------------GAATCAGTCAGGTA--------ATATTTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATAAAC-A-AAATTCT--TTTCAAATGAA-A-TTGAA-TGAGCGACAAGCT-TGATTT--A--GACTATTCAT--GCA--TCTTT---A---TTA--AGAT----------TTTACAGTGTTCTTAAG-TACC--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGT--ATTG------CTAGTACA--GTA--ACTACATT-AATCAAATTAATGACAGGCGAAG--TA--AAT-GGAAATG
gi|53 : A---TGCGAAA-AA-GA--TGGCACC-T-A-----TACA-AGTAAAAGCAATTG--A-TTTTT-CAT--CAGC-------ACCTA
gi|55 : -ATCA-T-CAG-GGAAAAGG---------CAGTACCT-ATGACAAAG-GAG-ATCAATTA-------AAAGCATGC
gi|57 : -T-GTAGT-TTCGC-A---AG-A---GTT-A-A-TGGT-T-TTAA----GTAT-GCA-CT--C-TTC-TA-CA-T-AGA
gi|58 : GGATTTT-AGCCGAGAACAGCTC-TACAGA-GGATGCTCATCA--TGTg
gi|59 : AGGGTCCTCCAG-T-GTCGTGGCCGATATGTC--TTG-AGT
gi|6 : tAAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-GGTAA-TTTT-A-TCTC-AAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TAATGT--AACT--CCTA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-CTCACA-GA-C-AGAA--G-AT--AATA----A--A--AGG----CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GTTT---G-ATGAGAAAT--CCGA-ATAAAGAACGCGACG-ATCTATAAGTG-AAAACAAC--------AAA----AGAT-C--AAAAC-CA--AATGA---GC---AC-A--TGTTATTG-------TA--------------CCCTTA---ACTG-CATCACG--AAGTTG----T-A-A-GGT--ATATCATTG--C-TA---TGGGAAA-AAAGA--TGGCACC-T-C-----TACA-AA------CAATTG--A-TGTTT-CAT--CAGCACCG---GCCTAT--AT-AA--GG--TCGTGAA-CAGAA-TTGTA-CCT-TTCTA-----TC
gi|6 : tt-C-T-TTCCACCAAA-C-------C--T--ACT---------CG--CTATA---------------GAA-CAGTCGG-TA--------G-------------------GTA-TAAATTAAATAACGCAA--------AAATTGAAAT--ACGG-A--TTCTTCTTCCAAAT-AA-A-TTAAA--GA-CAATATGCT-TGATTTTCA--GACTACATGT--ACAATTCCTG---A---TCA--TGAT----------Tccaaataaaatttaccccccattcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtgaatcaacctttccaccaaacctactcgctatagaacagtcggtaggtataaattaaataacgcaaaaattgaaatacggattcttcttccaaataaattaaagacaatatgcttgattttcagactacatgtacaattcctgatcatgattaacacatttgcagt
gi|7 : ttaagggtcctccagtgtcgtggccattcttgggtaattttatctcaagacaaagaagattttcacttcaaagtaatgtaactcctatgtaatttcgcaagagttaatgttcttagtatgcactcctcacagacagaagataataaaaggctcataaaccatggtgaagataaacaaaagtttgatgagaaatccgaataaagaacgcgacgatctataagtgaaaacaacaaaagatcaaaaccaaatgagcacatgttattgtacccttaactgcatcacgaagttgtaaggtatatcattgctatgggaaaaaagatggcacctctacaaacaattgatgtttcatcagcaccggcctatataaggtcgtgaacagaattgtacctttctatcccaaataaaatttaccccccattcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtgaatcaac---T-ACACATGTTGCA-GTACGTACAG-TCA-AATCATTGTAAATGTAACT-----TGTAT-TT---AGATTTAATAAA----TGATT-ATGCTTTGATTAATATGTACATGTATTTGA-CAGA-TAATTATCGAAGCAGAAACTGGAAA--GA---AG-GAC-GTCGTAT-TATTG---TATTGGGGATTTT-AGCCGA--ACAG-CTCTACAGA-GGATACTCATCA--TGTCATCTG--CCATTGCATT-----TGATATTAGTA--ATTATTGTAG-AT----GAATA-GCA-TTTTAGATTGGGA--TC-GCTCT--TTA-GTATACCATGCTCCAAaacacatttgcagt
gi|8 : ttaatTCCTCTAG-TTGTCGTGGCC-AT---TC--TTG-AGTAA-TTT--A-TCTC-GAGACAAAGA-----TTTTC-A-CT--TC-AA-AG--TATTGT--AATC--ACTA-TAGTAAT-TTCGC-----AG-A---GTTAA-A-TGTT-C-TT-A----G-AT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--AAG----CTC-ATAAACCAT-GGTG--AAG-AT-AAC-AAA-GAGT---GAATGAGACAT-CCCGATAT----AACG-GGCG-ATCT-TAAGTGAAAAGCAACG-------AAACCAGAGGC-T--TAAAC-CAC-AATGAC-AGCT--AC-GATTGTTATTG--CTAATTA--------------CTCTT----ACTGCC-CCACG--AAGTTG----TAA-A-GGC--AGATCA-TG--CTTA---TGCG-AA-AAAGA--TGGCACC-T-C-----TAC--AG------CAATTG--A-TTTTT-CAC--CAGT-------ACCTAN--NN-NN--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNNNN----NNNNTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA--GCACC-T-GTTCACCAAA-CTACGA--C--T--AC-A--GA---TCGGCCTGCA---------------GGATCAGTCGGGTA--------A----TTTTTTTTTACACCTGTAATGAATTACATAA-TCAATGACAGGCGAAGT-AAATGAAccatttaagggggaaagcatgtacatgcaaaaagattagtccagctgtttttaacctttttttagattctggaaatagagataattaattttgcagctaatattatgtaaatttcattttccctcattcttcaaaattcaccagcaaaaattaaattctaattgatatattttatacatatactaattactattacatgtacatgtatgttaaaatttgaaacaaaattttgtagttattattttgtttttcatttttgtaatatatatgcattgcattttttttatatatgtctgatatgttttatatttatttt
22 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): ATGCATGTAAAAAGAATTAGGTTCTGTTTGTAACCATGTTTTAGATTCTGCAAAGGGAGGTAATTATTTTTGCAGCTAATATTTATGTAATTTTATTTTTCCCCATTCTTCAAATTCACAGCAAAAAATTAAATTCTAATGTGATATATTTCATACATTCTATTACTATTGATGTTAAAATTTGAACAAAATTTGTGGTATATTATTTTTTTTTTTATTTTCATTTTTGTTATAATATATGATATCGCATTTTTTTTTAAATATTCTAATTTTTTATTTAAGTTTTATTTGGTTATTGATGGGTTTTTATATTTGATATATCATTAATTATTGTATTTCTAGCCATTTCTTTGTTTTTTTGTATTTAAATTGTTTTGTTTGTTTCATGCAACATTAATGTGCAATGACATTAGAAGTAATAAATCATAAAATATATGCTAATTTTGTTATTGTCTTTGATGTTAAATTATGTTATATGGTATATTCAACAGCCTGCTGTTGTTTATGATTTTGGGACTTAAAACTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|12 ): TTTTTTTCCCCATCCTTCAAGATTCAACAGCAAAAAAAATAATAAATTCTAATTGATATATTTATAAATATACTGATTACCATTATGTTCAAATTTGAAAAAAATCTTGTGGTTATTATTTTTTTAATTTTCATTTTTGTTATATATATGAATTGCATTTTTAAAAAATATTCTGATAATTTTTATATTTATGTTTTGCTATTTGGTTTTGATGGGTTTTTTATTTGATATATTATTGTTGTTATGTATTTTGCCTATTTCTTTATTTGTTTTGTATCTAAATTGTTTTTGTTATGTGTTCATGCAACATATGTGCAATAACATTACAAGTAATAAATCATAAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTATATGATTATGCCAAGTAACCATGCTAGTTTTATGAATTTTGGAAAAACAATTGGTTGACC
Unaligned ( gi|17 ): TTCTAATTGATATATTTATACATATATACTGATTACCTTTATATTTAAATTTGAACAAAAATTGGTCATTAATTTTTTTTAATTTTTGTTATTATATATTGAATTGCATTTTTAAAAAAAATGTTCTCATATTTTTGATATTTTATGTTTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCGACATGTATTTATTTTTTATTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATTATGTGCAATAACATTAGAAGTAATAAATCATAAAAAAATATGGCTAATTTGTT
Unaligned ( gi|18 ): TTAATTTTGATGGTTTTTTTTTTAAATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTTGGATTGTATTTAAATTTTATTGTTATGTGTTCATGTAACATTATGTGCAATAAATTAGAAATAAAATAAATAATAGAAAATATGGCTAATTTTGTTATTGTCTTTGGTGTTTAATTATGTATATATTATCCAAGTAACCATCTGGTTTTATTGTTGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTTAA
Unaligned ( gi|19 ): TAATTTTGATGTTTTATTTTTTTAACATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTGGATTGTATTTAAATTTTATTGTTATGTTTCACTAGTAACATTAGGTGCAAGTCAACAATTAAAATAAAATAAATAATAAAAATGCTAATATTGTTATTGTCTTTGGTGTTGAAATTATGTATCATGATTACAAGTACATCGCTGTTTATAATTGGAGGGGGGGGCTTAGGATGACCCTTCACCTCCTTA
Unaligned ( gi|20 ): ACATATACATATTATGTTAAAATTAAAAAAAATGTATTGTTGTTATTATGCTTTTTATTTTCATTTTTGTTATAAATATAAATTGCATTTTTTTAATATTCTATTTTTTATATTTAAATTTTGTTATTTAGTTTTGATGGGTTTTTTTTATTTGATATATTATCATTGCTATGTATTTTGTCTATTTCTTTCTTTGTTTTGTATCTAAATTGTTTTTGTTGTGTGTTCATGTCTCATTGTGGGCAATAACATT
Unaligned ( gi|26 ): CTGATTACTATTAAGTGAAAATAAGAACAGAATATTGTGGTTATTATTATAATTTTTTTTTTCATTTTTGTAATATATATGAATTGCATTTTCTTTTCCTTTTTATATTCCTATAGTTTTGATTTTTTTTTATTTGGTTTAATGGGTTTTTTTTTTATTGATATATTATTTTTGTTAAGTATTTTGCCTATTTCTTTGTTTGTTTTGTA
Unaligned ( gi|27 ): TTGTTATTGATTTTGGTCGGTTTTTGTTATTTGATATATTATCATGTTATGTATTTTGCCTATTTCTTTTTCTTTTGTTTTGTATTTAAATTGTTTTGTTATGTGTTCATCTAATATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAACTGTGTTACTGTCTTTGACGTTAAAACTATGTATATG
Unaligned ( gi|30 ): ATTTCTTTATTTGTTTTGTATGTGTTCATACAACATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTAAAGGTAGAAGCCAAGTAACTATGCTAGTTTTATGAATTTTGAAGAAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|31 ): TTAGCTCAGCTGTTTGTAAGAATTTTTGTTTAGATTCTGCTAAGGGAGGTAATTAATTTTGCAGCTATGATTATGTAAATTTCATTTCTTCCCCATTCTTCAAAATTCACCAGCAAAAGAAAATTTAAATTCTAATTGATATATTATATAT
Unaligned ( gi|34 ): TTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCTACATGTATTTATTATTTGTTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATNNNT
Unaligned ( gi|38 ): TTTGCCTATTTCTTTGTTTGTTTTGTATTAAAATGGTTTTTGTTATGTGTTTATGTAGCATTATGTGCAATAACATTAGACGTAAAATATGGCTAATTTTGTTATTGTCTTT
Unaligned ( gi|39 ): ATGTGCAATAACATTAGAAAGTGTTACTGTCTTTGATGTTAAAATTATGTATATAATTATATCAAATTTATGAATTTTGGAGAGAAAAACTTGATGACCCTCCAGCATTCTT
Unaligned ( gi|41 ): ATTGTGTTACTGTCTTTGATGTTGAAATTATGTATATGGTTATGCCAAGTGACCATGCTAGTTTTATGAATTTTGGAAAAATAATTGGATGACCCTCCAGCCTC
Unaligned ( gi|45 ): CGTGTAACAAAGATAATGTTCAGCTGTTTTACTGCTTTTAGATTCTCCAATAGGAGAAATTAATTTGCAGCTAATAATTAGTAAATTTTT
Unaligned ( gi|47 ): GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|49 ): AACCATGCTAGTTTTATGCTTTTTTCGAGGGGAGGGGGGGGGGGGGGGCGACCCTCCTGCCTCCTT
Unaligned ( gi|50 ): GTAACCATGCTGGTTTTATGAATTTGGGAGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|51 ): GTAACCATGCTAGTTTTATAAATTTTTTTGGGGGGGGGGGAAATGGATGACCATCCGGCCTCCT
Unaligned ( gi|52 ): CAAGTAACCATGCTAGTTTTATGAATGGGGGGGGGGGGATGGATGACCCTCCAGCCTCC
Unaligned ( gi|54 ): TAATCATGCTAGTTTTATGAATTTTGGATAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|56 ): GCTAGTTTTATGAATTTTGGGGGAAAACTTAGATGACCCTCCAGCCTCCTTA
Alignments
lowQualScore : 222222 111 11111111 111111 22222222222222 1111 1 111 1 444444444 1111 111 11111111 11111 11111111 4444444444444 11 222222222222222 333333333333 22222222222222 111 111 1111111111 2222 2222 66666666666666 1111 1 444444 11111 4444444444444444444 11 11111 1111 33333333 111 2222 2222 222222 11 111 111 11111 11111 111 33333333 2222222
lowQualScore : 3 3 3 666 55 3 3 3 3 3 88 3 3 55 3 3 55 55 88 1 3 3 3 88888 3 555 6 3 3 3 3 3 7777 0 3 3 55 3 3 3 3 44 3 44 7777 55 88 999999 3 4 3 55 3 3 3 000 4 4 0 4 4 0 0 55555555 7777 4 55 4 4 4 55 4 000000 11111111111111 1111 5 55 7777 4 3 7 55 3 55 222 1 3 44 88888 999999 3 888888 44 3 3 666666666 55 1111 11 4 8 4 55 111 88 55555555 999999999 11111 88888888 0000000000000 5 5 999 66 66 66 00 66 777 555555555555555 666666666666 2 5 1 1 8 11111111111111 1 444 66 66 1 4 8 4 4 888888 66 66 333 777 0 66 9999999999 5 3333 5 5 5 44 77 88 99 5555 77 66666666666666 888888 5 6666 1 6 1 6 99 3 88 7 333333 66666 9999999999999999999 3 6 88 8 8 8 6 6 66666 4444 6 8 5 88888888 6 6 6 6 2 000 4444 0 5555 8 3 333333 8 8 0 0 66 11 444 8 8 6 111 5 66 5 66 66 11111 11111 66 44 4 9999 4 7 66 5 66 55 5 1 111 5 5 77 77 5 55555555 6 6 6 4444444 0
lowQualScore : . . . ... .. . . . . . .. . . .. . . .. .. .. . . . . ..... . ... . . . . . . .... . . . .. . . . . .. . .. .... .. .. ...... . . . .. . . . ... . . . . . . . ........ .... . .. . . . .. . ...... .............. .... . .. .... . . . .. . .. ... . . .. ..... ...... . ...... .. . . ......... .. .... .. . . . .. ... .. ........ ......... ..... ........ ............. . . ... .. .. .. .. .. ... ............... ............ . . . . . .............. . ... .. .. . . . . . ...... .. .. ... ... . .. .......... . .... . . . .. .. .. .. .... .. .............. ...... . .... . . . . .. . .. . ...... ..... ................... . . .. . . . . . ..... .... . . . ........ . . . . . ... .... . .... . . ...... . . . . .. .. ... . . . ... . .. . .. .. ..... ..... .. .. . .... . . .. . .. .. . . ... . . .. .. . ........ . . . ....... .
lowQualScore : 6 6 6 444 00 3 6 6 6 6 66 6 6 00 6 6 00 00 66 0 1 1 1 22222 1 444 7 3 3 6 6 6 7777 9 6 6 00 6 1 1 1 66 3 66 7777 00 66 111111 6 3 6 00 6 7 3 444 0 0 6 0 0 8 8 33333333 7777 0 55 0 0 0 55 0 444444 44444444444444 4444 1 00 7777 5 6 3 55 6 00 555 4 3 66 11111 666666 3 888888 22 1 3 333333333 55 9999 66 0 0 0 22 000 66 00000000 777777777 11111 11111111 0000000000000 0 0 777 11 11 11 33 11 888 000000000000000 111111111111 4 7 9 1 9 66666666666666 6 000 11 11 9 4 9 4 4 222222 11 11 999 888 9 11 4444444444 0 1111 7 0 7 66 99 33 22 0000 99 55555555555555 111111 7 7777 5 7 0 7 88 3 33 3 000000 77777 0000000000000000000 5 7 00 0 0 0 7 7 77777 2222 7 0 0 66666666 7 7 7 7 5 777 6666 8 0000 0 8 000000 0 0 8 8 22 00 000 0 2 7 777 0 99 0 11 99 11111 11111 11 66 4 4444 4 3 99 0 99 44 6 0 555 7 7 99 99 7 55555555 7 7 7 2222222 8
consensus : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-CATCAGCAC-----G--CCTAC--ATA-G--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGCGAG-C--A--C-T-GTTCACCAAAC-T-ACGA--C--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--TTCT--TTTCAAATGAA-A-TTAAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGTA--TTGCTA--CTAGTACA--GTAA------TAACTAA-CATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATCAT-AAAT-ATGT-TAGACTTTCTTTTATGTGATACG--TTTGCAAAATAAGTAG-----ATAT----TA---TGT---A---TTATAAACTCCATGTATAA-TACTAAGCACGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTACAG-TCA-AATCACTGTAAATGCAATTATTTGTNTATGTT---AGGTTTAATAAA----TGATT-AAGCTTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGTCGTAT-TATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--TC-GCTCT--TTAG-TATAACATGCTCCAATTGTAAAAATGTTACCCAAG-T-ATCA-T-CA--GG--GAAA-AGG---C---CCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
Reference ( family-1351 ) : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-CATCAGCAC-----G--CCTAC--ATA-G--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGCGAG-C--A--C-T-GTTCACCAAAC-T-ACGA--C--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--TTCT--TTTCAAATGAA-A-TTAAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGTA--TTGCTA--CTAGTACA--GTAA------TAACTAA-CATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATCAT-AAAT-ATGT-TAGACTTTCTTTTATGTGATACG--TTTGCAAAATAAGTAG-----ATAT----TA---TGT---A---TTATAAACTCCATGTATAA-TACTAAGCACGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTACAG-TCA-AATCACTGTAAATGCAATTATTTGTNTATGTT---AGGTTTAATAAA----TGATT-AAGCTTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGTCGTAT-TATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--TC-GCTCT--TTAG-TATAACATGCTCCAATTGTAAAAATGTTACCCAAG-T-ATCA-T-CA--GG--GAAA-AGG---C---CCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
gi|1 : AAGGGTCCTCCAG-T-GTCGTGGC--AT---T---TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGA---GATTTT--A-CT-----AA-AG--TGTCGT--AACT--CTAA-T-GTAAT-TTCG--A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GC--CT--C-TTCA-A-CA-T-AGAA--G-AT--AATA----A--G--A------CTC-ATAA-CCAT-GGTG--A-G-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-ACGAACG-GGCG-ATCTATAAGTGAAAAA--ACA-------AAA-----TAT-C--TAAA---AC-AATGA--GACT--AC-GATTGTTATTAGTT---TTA--------------CCCTT----ACTGCCC-ACG--AAGTTG----T-A-A-GGT--ATTTCA-TG--TTTA---TGCGAAAGAAAGACGTGGCACTT-----TA------CA-AG------CAATTG--A-TTTTT-CATCAAT-----------CTAC--ATC-G--GGGCTCGTG-A-C-GAC-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NGGA--C-T-GTTCACTAAAC-G-AC-A--G--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TATTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--CTAT--TTTCAAATGAA-A-T-AAA-TGAACGACATGCT-TGATTT--A--GATTATTTGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCATAAG-TA-C--AC-ACTGC-ACC-TATCCGCC---AGGA-CGTAAATTGCTAGACTAGCACA--GTAAG-----TAACTAAACATTAATGACAGGCGAAG--TA--AAT-GGAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATCAT-AAAT-ATGTGTAGACTTTC-TTTATG-AATACGA-TTTGCAAAATAAGTAG-----ATAT----TA---TGT---A---TT-TAAACTCCATGTATAA-TTCTAAACAGGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA-----CCAT----CTAA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTTCAG-CTC-AATCACTGTAAATGCAATTATTTTTTTATGTTCTAAGGTTT-GTAAA----TTATT-AAGC-TTGATTAAT------ATGTATTTGA-CAGA-T-ATTCTCAAAGCATAAACTGGAAATCGA---AG-G-CGTCGCAT-TATTGTAATATTGGGAATTTT-AG-CGA--AAAG-TTTACAGA-GGATGCTCATCA--TATCATAAG--CCATGGT-TT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCA--TTTGGTTTGGGA--TC-GTCTT--TTAG-TATAGCATGCTCCAATTGTAAAAATGTTACCCAAG-T-ATCA-T-CA--GG--GAAAGAGG--------CAGTA-CT-ATGG-ACAG-GAG-ATCAATTA-------AAAGCATGCAC
gi|10 : AAGGGTCCTCCAG-T-GTCGTGGCT-AT---TC--TTG-AGTAA-TTCT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TATTGT--AACT--CTAA-T-GTAAT-TTCGC-----AG-A---Gg
gi|10 : ATTG--T---TTA--------------CCCTT----GCTG-CCCACG--AAGTTG----T-ACA-GGT--AGATCA-TG--CTTA---TGCG-AA-AAAGA--AGGCACCTATAGGTA------CA-AA------CAATTG--A-TTTTT-CATCAGCA---------CCT----ATA-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NNNN--------NTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA---GGA-C-----C-T-GTTCACCAAAC-T-ACGA--CAGT--ACTATTGA---TCGGCCTACA---------------GAATCAGTTGGGTA--------AT--Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattgtttacccttgctgcccacgaagttgtacaggtagatcatgcttatgcgaaaaagaaggcacctataggtacaaacaattgatttttcatcagcacctatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggacctgttcaccaaactacgacagtactattgatcggcctacagaatcagttgggtaatt
gi|11 : aagggtcctccagtgtcgtggctattcttgagtaattctatctcgagacaaagaagattttcacttcaaagtattgtaactctaatgtaatttcgcagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATGACAGGCGAAG--TA--AAT-GAAAGTAAACGTGAAAATATA---------------------------AT-AAATTATGT-TAGACTTTCTTTTATGTAATA------TACAAAATAAGTAG-----ATAT----TA---TATGTAA---TTATAAACTCCATGTATAA-TACTAAGCACAGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT--------T-ACACATGTTGCA-GTACGTACAG-TCA------C-----ATGCAATTATTTGTATGTAT------GTTTAATAAACAATTAATT-AAGCCTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGCCGTAT-TATTG---TATTGGGGAGTTT-AGCCGA--ACAGCTCTACAGAAGGATTCTCATCAGATATCATTAAGCCCATTGCTTT-----TGAT-----AA--A-----------------------CATTT--GGTTTGGAT--CC-GCTCT--TTAGGTATAGCA-G-TCCAATT-TGAAAAT--TACCCAAGGT-ATCA-T-CA--GAGCGAAA-AG--------CTAGTACAT-ATTGCACAGCGAG-A
gi|13 : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-ATAAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TCAAA-AG--TGTCGT--AACT--CTAT-T-GTAAT-TTTGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CTCCC-TTCATA-CA-T-AGAA--GCAT--AATA----A--A--AG-----CTC-ATAACCCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAC-GCGAACG-GGCGAATCT-TAAGTG-AAAACAAC--------AAA----AGATCC--TACACGCACAAATGACAGACTTAACGGATTGTTATTG--T---TTA--------------CCCTT----ATTG-CCCACG---AGTTGTAATT-A-A-GGT--CATTCA-TGGTTTTAT--TGCGAAA-AAAGA--TGGCACCT----TTA------CA-AG------CAATTG--ATTTTTT-CATC-GCA------GTCCCTAC--ATATG--GGGCTCGTG-A-C-GACTTTG-GCCC--TTCTA-----TCTTTCAT---A
gi|14 : tG------TAATTG--A-TTTTTTCATCAGCAC-----GG-CCTAT--ATA-TACGGGATCGTG-AGC-GAA-TTT-G-AC--GTCGACCGTTTCTTCTAT---ATAAATTTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTA----------A--C-T-GTTCACCAAAT-TCACGAACC--TTCATTA--GA---T-GGCCTACAGAATCCCCGGGACAGGAATCAGTCGGGTATTTTTTTTTT--TTTTTTTTTTATACTGGCA-TAAG-TA-ATAA-GC-A--------AAAT----ATGAAC-G-A--TTCT--TTTC-AATGAACATTTAAA-TGAGCGACATGCTGTGATTA--AGTGACTATTTGTGGGCA--TCTGT---ACAGTGACGTGATCTGTATTACGTTTACAGTGTTTCTAAGCTA----GT-AC-GC-A-------CGGCAACAGG--CGTA--TTGCT----CAGGACA--Gaattt
gi|15 : ATA-CA-T-AGAA--G-AT--AATA----A--A--AGA----CTC-ATAAATCAT-GGTG--AAG-ATAAAAAAAAAGCGT---GACTGAGAAAT-CCCGAGAT-AAGAACG-GGCA-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--TT-GATTGTTATTG--T---TTA--------------CCCCT----ACTGCCCCACG--AAGTAG----TAA-A-GGT--GGATCA-TG--CTTA---TGCG-AA-ATAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-TATCAGCATCG---G--CCTA
gi|16 : G-AGTAA-TTTT-A-TCTC-GAGATAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTAA-T-GCAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-AT--C-TTCATA-CA-T-AGAG--G-AT--AATA----ACAAT-A------CTC-ATAACCCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-ACGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-AGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTG-CCCAAG--AAGTTG----TAA-A-GGT--TCTTCA-TG--CTAA---TGC-AAA-AAAGA--TGACACCT----TTA------CA-AG------CAATTG--A-tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcacctgttcaccaaa
gi|2 : AA----AG-T-C--TAAAC--AC-AATGAC-GGCT--AC-GATTGTT-------------------------------T----A-TGCCCCACGCTAAGTTG----T-A-AAGGTTAAGATCA-AG--CTTAA--TGCGAAA-AA-GA--TGGCACCT----CTA------CA-AG------CAATTGCGA-TTTTT-CATCAGCACCACCGG--CCTAT--ATA-G--GGGCTCATG-AAC-GAA-TTG-AACC--GTCTA-----T--TCTGT----T----TTA-----CATT--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAG-C--A--C-TTGTTCATTAAACAT-G-GA--C--T--ACTA--GGCCTTCGGCCTACA---------------GAATCAGTCGGGTA------------TTTTATTTTT-CACCTGTACTAA-TTACATAAAGCAA--------AAATT-AAATGAAC-GGA--TTCT--TTTCAA-TGAA-A-TTAAACTGAG-----------------------------GT--GCA--TCTTTGT-A---TTA--TGAT----------TGTA-AGT-TGCTTAAG-TA-CCGGTGAC-GCCACCCCATCTGCC--CAGGATCGTA--TTGCTAG-CCAGTAC-----------------TA--CATTAATGACAGGCGAAG--TA--AATCGAAAGTGAACGTGAAA-TACAT-A--------------ATAAAATATCAT-AAATTATGC-TAGACTTT-TTTTATGTGATATG--CCTGGTGAATAAGTAGTGGTTACAT----TA---------A---TTATAAACTCACTG-ATAA-TA----GCATGGCTTTATTAG-AT-AAACTTGAGAAAAAAGAA-TATA----GCCATGGATCTGA-TTTTCATCTCCACAGTA-ATT----AACTT-ACACATGTTGCAAGTACGTACAAATCATAATCACTGTAAATGCAATTATTTGTGGGTGGT---AGGTTTAATAAA----TGATTTCAGTTTTGATTAAT------ATGTATTTGA-CAGAATAATTCCTGAAGC-TAAACTGAAAA--GATCGAGTGCCGTCGTAT-TATTG---TATTGGGGATTTTTAGCCGA---CAGCATTACAGA-GAATGC-CATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATACGAATTTTTGGTTTGGGAGTCC-GCTCTTCTTAG-TAT-ACATGC-CGAATTGTAAAGAAGTTACCCAAT-T-ATCA-TGCA---G--GAAA-AGGTATT---CCAGTACCTGATGGCACAG-GAGAACAAATTAAAGGGGAAAAGCA-GCAC
gi|21 : TAC-AT----GAATA-ACATTTTGAGTT-GGGG--TC-GCTCT--TTAG-TATAACATGGTCCAATTGTAAAAATGTTACCCAAG-TAATCA-T-CA--GG--T--A-AGG---CATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCACatgtaaaaagattagttcaactgttttaagattctaccaaggggaggtaataatttgcagttaatattatgtaaattt
gi|22 : ATTCGT--GCA--TCTTA---A---TTA--TG-T----------TTTACAGTGTTCTAAAT-TA-CC-GC-AC-GC-ACCCTATCCGCC--CAGGG-CGTA--TTGCCA-----GTACA--GTAA---------CTA--CAGTAATGACAGGTGAAG--TA--AAT-GAAAGTGCACGTGAAAATACAT-ACTGTATTGAA-GGTATCAAATATAAT----T-ATGT-TTGACTTTCTTTTATGTGATA-----TTACAAAATAAGT-------AT---------------------TTATAAACTCCATGTATTA-TA--AAGCtgtccatttttaagacacttgcaagggaggtaattaaatttgcaggtaatattatgttgggtttttttttttgcccattcttcaaaaattcaccagaaaaaaattaaattctaa
gi|23 : AGGGTCCTCCAG-T-GTTGTGGCC-AC---TC--TTG-AGTAA-TTTT-A-TCTT-GAGACA---AA--GATTTTC-A-CC--TC-CA-AG--TATTGT--AACTG-CTT--T-TTAAT-TTCGA-G---AG-C---GTG-A-A-TG
gi|23 : ttgtCGAGA-GCGT---GAATGGGAAAT-CCCGAGAT-AAGAAAG-GGCG-ATTTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--GC-GATTGTTATTG--T---TTA--------------CACTT----ACCGCCCCACG--AAGTTG----T-A-A-AGggaaatcccgagataagaaagggcgatttataagtgaaaaacaacaaaaagatctaaaccacaatgacggctgcgattgttattgtttacacttaccgccccacgaagttgtaaagc
gi|24 : ttgtagggtcctccagtgttgtggccactcttgagtaattttatcttgagacaaagattttcacctccaagtattgtaactgctttttaatttGGTCCTCCAGTT-GTCGT-GCC-A----TCGGTTGTAGTAAGTTTTAA-TCTCGGAGACAAAGAATTGATTTTCGA-GTTATC-AAGAG--TGTTGTTGTACTGCCTCA-T-ATAATGTTCGC-ATATAGTA---TTT-A-AGTGTGAC-TT-ACATTGCAT-GCT-CT--C--TCATAGCATT-AGAA--G-ATAAAACA----A--A--AATTGATCTC-AT-AACCAT-GGTGTCAAGTATAAAC-AAA-GCGTTGGGGATGAc
gi|25 : ta--TTCTA-----T--TCTAT---AT----TTA-----CATN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGC--A-C-----C-T-GTTCACCAAAC-C-ACGA--C--T--A-TA--GA---TCGGCCTACA---------------GAATCAGTTGGGTG--------A---TTTTTTTTTTGCACCTGTATTAAATCACATCA-GCAA--------A-----AAAT-AAC-G-G--ATTA--TTTCAATTAAA-A-TTAAA-T-AGCGAAATGCT-TGATT
gi|28 : ccgAAGGGTCCTCCAG-T-GTCGGTGCC-AT---C----TG-AGTAA-TTTT-AATCTC-GAGACAAAGAAT-GATTTTC-AGTT--TC-AA-AAGTTGTTGT--AACT--CTCAAT-ATAAT-TTCGCTA---AG-ATTTGTTTA-A-TGTG-A-TT-A----GCATTGCAGCT--C-TCCATA-CA-TTAGAA--G-AT--AAAACAAAA--A--A------CTC-ATAA-CCA--GGTG--AAG-ATAAACAAAA-GCGT---GA
gi|29 : tACGTGAAAATACAT-A-AGTATTAAAAGGTATGAAATATCATGAAAT-ATGT-TAGACTTTCTTTTATG-AATACGGATTTGCAAAATAAGTAG-----ATAT----TACTATGT---AACTTTTTAAACTCCATGTATAA-TA---AACACGGCTTTAT-AGCATAAAACTTT-GAAAAAA-AG-T-TATCCCGGCAT----CTAATTTTTCATCT
gi|3 : TG--CTAGTACA--GTAA---------CTA--CATTTATG-----CGAAGGTTACCAAT-GAAAGTGGACGTGAACATACATTA-TGTATTAAA-GGTATGAAATAT-------T-ATG------CTTTCTTTTATGTGATA------TACAAAATAAGTAG-----ATATATTACA---TGC---AA--TTATAAACTCCATGTATAAATACTAAGCACAGCTTCAT-AGCAT-AAACTTT-GAAAAGA-AAATATA----GT-AT----CTGA-TTTTCATCTCTG-AGTAAATT----AAT-T-ACACATGTTGCA-GTACTTA--G-TCA-AATCACTGTAAATGCAATTATTTGT--ATGT----AGGTTTAATAAAA---TGATT-AAGCTTTGATTAAT------ATGTATTTGAACAGA-TAAT------------AACTGGAAA--GA---AA-GTCGTCGTATATATTG---TATTGGGGATCTT-AGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCACCAG--CCATTACATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-ACA-TTTTGGTTTGGGG--TC-GCTC---TTAG-AATAACATGGTCCAATTGTAAAAATGTTACCTAAG-T-ATCA-T-CA--GG--GAAA-AGG---CATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
gi|32 : ACA---------------GTATCAGTCGGGTA--------ATA-TTTTGTTTTTGCACCTGTACTAAA-----------------------------ATGAACAG-A--TCCT--TTTTAAATCAA-T-TTAAA-TAAGTGCCATGCT-TGATTA--A--GACTATTCGT--ACA--TTTTT---A---TGA--GGAT----------TTTACAGTGTTCTTATG-TA-CT-GC-AC-Gatgtaaccatttttaagattctgcaaaggggggtaattaaatttgcaggtaatattatgttggttttttccctcattcttcaaaattcaccagcaaaaaaaaataaattcta
gi|33 : caAAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-GT--TC-AA-AG--TGTTGT--AACT--CTCA-T-ATAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GCAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--
gi|35 : tATA-CA-T-ATAAATG-AT--AAAA----G--A--A------CTCCATAAATCATAGGTA--AAG-ATAAACAGAA-CCGTTT-GATTGAGAAATCCCCGATAT-AAGAAC--GGCG-ATCTATAAGAGAAAAACAACA-------AAA----AG
gi|36 : CGTTGCATT-----TGAT------A--ATT--TGTGGTAT----AATCA-GCATTTTGGGTTTGGGA--TTTGTTCT--T-AG--ACAACAT--CCCAATGGTAAAAAAATTACCCAAG---ATCATT-CAGTGG--GAAA-AGG---C---
gi|37 : tGATGCTCATCA--TATCATCAG--CCATTGCATTGCATTTGAT-----TATAATTG-TGTAG-ATCTATGAATA-GCATTTTTGGTTTGGGA--CC-GCTCT--TTAG-TACAACATGCTCCAATTGTAAAat
gi|4 : AAGGGTCCTCCAG-T-GTAGTGGCC-AT---TC--TTG-AGTAA-TTAT-A-TCTC-GAGACAAAGGA--GATTTTC-A-CT--TT-CA-AG--TATTGT--AACT--CCTA-T-GTAAT-TTGGC-A---AG-A---GTT-A-A-TGTT-CTTT-C----ATAT-GCA-CT--C-TTCATA-CA-T--GAA--G-AT--ATTA----A--AAGA------CTC-ATCAACCAT-GGTG--AAG-ATAAACGAAA-GCCT---GAATGAGAAAT-ACCGAGAT-AAGAAAG-GGCG-ATCTAAAAGTGAAAA--AACAGAGCTCTAAA----AGAT-CTATAAAC-CAC-AATGAC-GGCT--GC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----TAA-A-GGT--AGATCA-TG--CTTA---TGCG-AA-AAAGA--TGACACCT----CTA------CA-AG------TGATTG--A-TTTTT-CATCAGCA---------CCTACATATA-G--GAGCTTATC-A-C-GAA-TTG-G-CCCTTTCT
gi|4 : tTCACCAAAC-T-ACGA--C--T--A-TA--GA---TCGGCCTACA---------------AAATCACTCGGATA--------ATA-TTTTTTTTTTACACCTGTACTAAATCACATAA-GCAA--------T--TT-AAATGAAC-GGA--TTCT--TTTCAAATGAA-A-TTAAA-TAAGCAACATGCT-TGATTT--A--GACTATTCGT--GTA--CCTTT---A---TAA--TGAT----------TTTACAGTGTTCTTCAG-TACC--GC-AC-GT-ACCAAATCCGCC--CAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaccaaactacgactatagatcggcctacaaaatcactcggataatattttttttttacacctgtactaaatcacataagcaatttaaatgaacggattcttttcaaatgaaattaaataagcaacatgcttgatttagactattcgtgtacctttataatgattttacagtgttcttcagtaccgcacgtaccaaatccgccca
gi|40 : taagggtcctccagtgtagtggccattcttgagtaattatatctcgagacaaaggagattttcactttcaagtattgtaactcctatgtaatttggcaagagttaatgttctttcatatgcactcttcatacatgaagatattaaaagactcatcaaccatggtgaagataaacgaaagcctgaatgagaaataccgagataagaaagggcgatctaaaagtgaaaaaacagagctctaaaagatctataaaccacaatgacggctgcgattgttattgtttacccttactgccccacgaagttgtaaaggtagatcatgcttatgcgaaaaagatgacacctctacaagtgattgatttttcatcagcacctacatataggagcttatcacgaattggccctttctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnT-AAATGAAC-GGA--TTCT--TTTCAAATAAA-AATTTAA-TGAGCAACATACT-TGATTT--A--GACTATTCGT--GCA--TTCTTATGA---TTA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--
gi|42 : C-GC-ACCCTATCCGCC--CAGGA-CGTA--TTGCTA---TAGTACACTGTAACAG---TAACT-A-CATCAATGACAGGCGAGG------AAT-GAAAGTGAACGTAAAAATACATAA-TGTc
gi|43 : A-AA-TATA----CCCAT----CTGA-TTTTCATCTCTG-ATTACATTTAAAA---TTACACATGTTGCA-GTACGTTCAG-TCC-AGTCACTGTAAATGCAATTATTT-TTTAT
gi|44 : -TG--CTTAATATGCG-AA-AAAGA--TGGAACAT----CTA------TGTAG------CAATTG--A-TTTTT-CACCAGCA---------CCTAC--GTA--------T--TG-A-C-----------CC--TTCTA-------TTCTAT---AT----TTA-----CAT
gi|46 : TAT-GATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCCACATA-GGATGTTCATTA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-
gi|48 : t-AGCCGA--ACAGCTCTACATA-GGATGCTCATCA--TGTCATTAG--CCATTGCAAT-----TCAT-----TA--ATTG-TGTAG-AT----GATTA-GCATTTT
gi|5 : TGA-C-GTAAT-TT-G--A---AA-A---GTT-ACA-TTAT-T-TT-A-----CAT-----CT--CGTTC-------T-A-------AT--AAAA----A--A--A------CTC-ATAAACCAT------------------AAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCAATAAGTGAAAAACAATA-------AAA----A------------------ATGAC-GGCT--AC-GATTGTTATTG--T---TTACCCCCGGGTGTTTACCCTTTAATACTGTCCCACG--AAGTTG----T-A-AAGGA--AGATCA-TG--CTTG---TGCGAAA-AAAGA--TGGCACCT----CTATAGCTACA-AG------CAATTG--A-TTTTT-CATCAGCACCG---G--CCTAT--A-A-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NNTT--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG-C--A--CCT-GTTCACCAAAC-T-ACGG--C--T--A-TA--GA---TCGGACCACA---------------GAATCAGTCAGGTA--------ATATTTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATAAAC-A-AAATTCT--TTTCAAATGAA-A-TTGAA-TGAGCGACAAGCT-TGATTT--A--GACTATTCAT--GCA--TCTTT---A---TTA--AGAT----------TTTACAGTGTTCTTAAG-TACC--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGTA--TTG-----CTAGTACA--GTAACTACATTAATCAA--ATTAATGACAGGCGAAG--TA--AAT-GGAAATG
gi|53 : A---TGCGAAA-AA-GA--TGGCACCT----ATA------CA-AGTAAAAGCAATTG--A-TTTTT-CATCAGCAC-----
gi|55 : -ATCA-T-CA--GG--GAAA-AGG---C-----AGTACCT-ATGACAAAG-GAG-ATCAATTA-------AAAGCATGCcta
gi|57 : -T-GTAGT-TTCGC-A---AG-A---GTT-A-A-TGGT-T-TTAA----GTAT-GCA-CT--C-TTC-TA-CA-T-AGA
gi|58 : GGATTTT-AGCCGAGAACAGCTCTACAGA-GGATGCTCATCA--TGTg
gi|59 : AGGGTCCTCCAG-T-GTCGTGGCCGATATGTC--TTG-AGT
gi|6 : tAAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-GGTAA-TTTT-A-TCTC-AAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TAATGT--AACT--CCTA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-CTCACA-GA-C-AGAA--G-AT--AATA----A--A--AGG----CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GTTT---G-ATGAGAAAT--CCGA-ATAAAGAACGCGACG-ATCTATAAGTG-AAAACAAC--------AAA----AGAT-C--AAAAC-CA--AATGA---GC---AC-A--TGTTATTG-------TA--------------CCCTTA---ACTGCATCACG--AAGTTG----T-A-A-GGT--ATATCATTG--C-TA---TGGGAAA-AAAGA--TGGCACCT----CTA------CA-AA------CAATTG--A-TGTTT-CATCAGCACCG---G--CCTAT--ATA-A--GG--TCGTGAA-CAGAA-TTGTA-CCT-TTCTA-----TCCCAAATAAAAT----TTACCCCCCATTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGAATC--AACC-T-TTCCACCAAAC---------C--T--AC---------TCG--CTATA---------------GAA-CAGTC-GGTA--------G-------------------GTA-TAAATTAAATAACGCAA--------AAATTGAAAT--ACGG-A--TTCTTCTTCCAAAT-AA-A-TTAAA--GA-CAATATGCT-TGATTTTCA--GACTACATGT--ACAATTCCTG---A---TCA--TGAT----------T
gi|7 : tt---T-ACACATGTTGCA-GTACGTACAG-TCA-AATCATTGTAAATGTA---ACTTGTAT---TT---AGATTTAATAAA----TGATT-ATGCTTTGATTAATATGTACATGTATTTGA-CAGA-TAATTATCGAAGCAGAAACTGGAAA--GA---AG-GACGTCGTAT-TATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCTACAGA-GGATACTCATCA--TGTCATCTG--CCATTGCATT-----TGATATTAGTA--ATTATTGTAG-AT----GAATA-GCA-TTTTAGATTGGGA--TC-GCTCT--TTAG-TATACCATGCTCCAAaacacatttgcagt
gi|8 : ttaatTCCTCTAG-TTGTCGTGGCC-AT---TC--TTG-AGTAA-TTT--A-TCTC-GAGACAAAGA-----TTTTC-A-CT--TC-AA-AG--TATTGT--AATC--ACTA-TAGTAAT-TTCGC-----AG-A---GTTAA-A-TGTT-C-TT-A----G-AT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--AAG----CTC-ATAAACCAT-GGTG--AAG-AT-AAC-AAA-GAGT---GAATGAGACAT-CCCGATAT----AACG-GGCG-ATCT-TAAGTGAAAAGCAACG-------AAACCAGAGGC-T--TAAAC-CAC-AATGAC-AGCT--AC-GATTGTTATTG--CTAATTA--------------CTCTT----ACTGCCCCACG--AAGTTG----TAA-A-GGC--AGATCA-TG--CTTA---TGCG-AA-AAAGA--TGGCACCT----CTA------C--AG------CAATTG--A-TTTTT-CACCAGTA---------CCTAN--NNN-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NTTN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG-C--AC-C-T-GTTCACCAAAC-T-ACGA--C--T--AC-A--GA---TCGGCCTGCA---------------GGATCAGTCGGGTA--------A----TTTTTTTTTACACCTGTAATGAATTACATAA-TCAATGACAGGCGAAGT-AAATGAAccatttaagggggaaagcatgtacatgcaaaaagattagtccagctgtttttaacctttttttagattctggaaatagagataattaattttgcagctaatattatgtaaatttcattttccctcattcttcaaaattcaccagcaaaaattaaattctaattgatatattttatacatatactaattactattacatgtacatgtatgttaaaatttgaaacaaaattttgtagttattattttgtttttcatttttgtaatatatatgcattgcattttttttatatatgtctgatatgttttatatttatttt
22 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): ATGCATGTAAAAAGAATTAGGTTCTGTTTGTAACCATGTTTTAGATTCTGCAAAGGGAGGTAATTATTTTTGCAGCTAATATTTATGTAATTTTATTTTTCCCCATTCTTCAAATTCACAGCAAAAAATTAAATTCTAATGTGATATATTTCATACATTCTATTACTATTGATGTTAAAATTTGAACAAAATTTGTGGTATATTATTTTTTTTTTTATTTTCATTTTTGTTATAATATATGATATCGCATTTTTTTTTAAATATTCTAATTTTTTATTTAAGTTTTATTTGGTTATTGATGGGTTTTTATATTTGATATATCATTAATTATTGTATTTCTAGCCATTTCTTTGTTTTTTTGTATTTAAATTGTTTTGTTTGTTTCATGCAACATTAATGTGCAATGACATTAGAAGTAATAAATCATAAAATATATGCTAATTTTGTTATTGTCTTTGATGTTAAATTATGTTATATGGTATATTCAACAGCCTGCTGTTGTTTATGATTTTGGGACTTAAAACTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|12 ): TTTTTTTCCCCATCCTTCAAGATTCAACAGCAAAAAAAATAATAAATTCTAATTGATATATTTATAAATATACTGATTACCATTATGTTCAAATTTGAAAAAAATCTTGTGGTTATTATTTTTTTAATTTTCATTTTTGTTATATATATGAATTGCATTTTTAAAAAATATTCTGATAATTTTTATATTTATGTTTTGCTATTTGGTTTTGATGGGTTTTTTATTTGATATATTATTGTTGTTATGTATTTTGCCTATTTCTTTATTTGTTTTGTATCTAAATTGTTTTTGTTATGTGTTCATGCAACATATGTGCAATAACATTACAAGTAATAAATCATAAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTATATGATTATGCCAAGTAACCATGCTAGTTTTATGAATTTTGGAAAAACAATTGGTTGACC
Unaligned ( gi|17 ): TTCTAATTGATATATTTATACATATATACTGATTACCTTTATATTTAAATTTGAACAAAAATTGGTCATTAATTTTTTTTAATTTTTGTTATTATATATTGAATTGCATTTTTAAAAAAAATGTTCTCATATTTTTGATATTTTATGTTTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCGACATGTATTTATTTTTTATTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATTATGTGCAATAACATTAGAAGTAATAAATCATAAAAAAATATGGCTAATTTGTT
Unaligned ( gi|18 ): TTAATTTTGATGGTTTTTTTTTTAAATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTTGGATTGTATTTAAATTTTATTGTTATGTGTTCATGTAACATTATGTGCAATAAATTAGAAATAAAATAAATAATAGAAAATATGGCTAATTTTGTTATTGTCTTTGGTGTTTAATTATGTATATATTATCCAAGTAACCATCTGGTTTTATTGTTGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTTAA
Unaligned ( gi|19 ): TAATTTTGATGTTTTATTTTTTTAACATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTGGATTGTATTTAAATTTTATTGTTATGTTTCACTAGTAACATTAGGTGCAAGTCAACAATTAAAATAAAATAAATAATAAAAATGCTAATATTGTTATTGTCTTTGGTGTTGAAATTATGTATCATGATTACAAGTACATCGCTGTTTATAATTGGAGGGGGGGGCTTAGGATGACCCTTCACCTCCTTA
Unaligned ( gi|20 ): ACATATACATATTATGTTAAAATTAAAAAAAATGTATTGTTGTTATTATGCTTTTTATTTTCATTTTTGTTATAAATATAAATTGCATTTTTTTAATATTCTATTTTTTATATTTAAATTTTGTTATTTAGTTTTGATGGGTTTTTTTTATTTGATATATTATCATTGCTATGTATTTTGTCTATTTCTTTCTTTGTTTTGTATCTAAATTGTTTTTGTTGTGTGTTCATGTCTCATTGTGGGCAATAACATT
Unaligned ( gi|26 ): CTGATTACTATTAAGTGAAAATAAGAACAGAATATTGTGGTTATTATTATAATTTTTTTTTTCATTTTTGTAATATATATGAATTGCATTTTCTTTTCCTTTTTATATTCCTATAGTTTTGATTTTTTTTTATTTGGTTTAATGGGTTTTTTTTTTATTGATATATTATTTTTGTTAAGTATTTTGCCTATTTCTTTGTTTGTTTTGTA
Unaligned ( gi|27 ): TTGTTATTGATTTTGGTCGGTTTTTGTTATTTGATATATTATCATGTTATGTATTTTGCCTATTTCTTTTTCTTTTGTTTTGTATTTAAATTGTTTTGTTATGTGTTCATCTAATATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAACTGTGTTACTGTCTTTGACGTTAAAACTATGTATATG
Unaligned ( gi|30 ): ATTTCTTTATTTGTTTTGTATGTGTTCATACAACATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTAAAGGTAGAAGCCAAGTAACTATGCTAGTTTTATGAATTTTGAAGAAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|31 ): TTAGCTCAGCTGTTTGTAAGAATTTTTGTTTAGATTCTGCTAAGGGAGGTAATTAATTTTGCAGCTATGATTATGTAAATTTCATTTCTTCCCCATTCTTCAAAATTCACCAGCAAAAGAAAATTTAAATTCTAATTGATATATTATATAT
Unaligned ( gi|34 ): TTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCTACATGTATTTATTATTTGTTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATNNNT
Unaligned ( gi|38 ): TTTGCCTATTTCTTTGTTTGTTTTGTATTAAAATGGTTTTTGTTATGTGTTTATGTAGCATTATGTGCAATAACATTAGACGTAAAATATGGCTAATTTTGTTATTGTCTTT
Unaligned ( gi|39 ): ATGTGCAATAACATTAGAAAGTGTTACTGTCTTTGATGTTAAAATTATGTATATAATTATATCAAATTTATGAATTTTGGAGAGAAAAACTTGATGACCCTCCAGCATTCTT
Unaligned ( gi|41 ): ATTGTGTTACTGTCTTTGATGTTGAAATTATGTATATGGTTATGCCAAGTGACCATGCTAGTTTTATGAATTTTGGAAAAATAATTGGATGACCCTCCAGCCTC
Unaligned ( gi|45 ): CGTGTAACAAAGATAATGTTCAGCTGTTTTACTGCTTTTAGATTCTCCAATAGGAGAAATTAATTTGCAGCTAATAATTAGTAAATTTTT
Unaligned ( gi|47 ): GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|49 ): AACCATGCTAGTTTTATGCTTTTTTCGAGGGGAGGGGGGGGGGGGGGGCGACCCTCCTGCCTCCTT
Unaligned ( gi|50 ): GTAACCATGCTGGTTTTATGAATTTGGGAGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|51 ): GTAACCATGCTAGTTTTATAAATTTTTTTGGGGGGGGGGGAAATGGATGACCATCCGGCCTCCT
Unaligned ( gi|52 ): CAAGTAACCATGCTAGTTTTATGAATGGGGGGGGGGGGATGGATGACCCTCCAGCCTCC
Unaligned ( gi|54 ): TAATCATGCTAGTTTTATGAATTTTGGATAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|56 ): GCTAGTTTTATGAATTTTGGGGGAAAACTTAGATGACCCTCCAGCCTCCTTA
Alignments
lowQualScore : 222222 111 11111111 111111 22222222222222 1111 1 111 1 444444444 1111 111 11111111 11111 11111111 4444444444444 11 222222222222222 333333333333 22222222222222 111 111 1111111111 2222 2222 66666666666666 1111 1 444444 11111 4444444444444444444 11 11111 1111 33333333 111 2222 2222 222222 11 111 111 11111 11111 111 33333333 2222222
lowQualScore : 3 3 3 666 55 3 3 3 3 3 88 3 3 55 3 3 55 55 88 1 3 3 3 88888 3 555 6 3 3 3 3 3 7777 0 3 3 55 3 3 3 3 44 3 44 7777 55 88 999999 3 4 3 55 3 3 3 000 4 4 0 4 4 0 0 55555555 7777 4 55 4 4 4 55 4 000000 11111111111111 1111 5 55 7777 4 3 7 55 3 55 222 1 3 44 88888 999999 3 888888 44 3 3 666666666 55 1111 11 4 8 4 55 111 88 55555555 999999999 11111 88888888 0000000000000 5 5 999 66 66 66 00 66 777 555555555555555 666666666666 2 5 1 1 8 11111111111111 1 444 66 66 1 4 8 4 4 888888 66 66 333 777 0 66 9999999999 5 3333 5 5 5 44 77 88 99 5555 77 66666666666666 888888 5 6666 1 6 1 6 99 3 88 7 333333 66666 9999999999999999999 3 6 88 8 8 8 6 6 66666 4444 6 8 5 88888888 6 6 6 6 2 000 4444 0 5555 8 3 333333 8 8 0 0 66 11 444 8 8 6 111 5 66 5 66 66 11111 11111 66 44 4 9999 4 7 66 5 66 55 5 1 111 5 5 77 77 5 55555555 6 6 6 4444444 0
lowQualScore : . . . ... .. . . . . . .. . . .. . . .. .. .. . . . . ..... . ... . . . . . . .... . . . .. . . . . .. . .. .... .. .. ...... . . . .. . . . ... . . . . . . . ........ .... . .. . . . .. . ...... .............. .... . .. .... . . . .. . .. ... . . .. ..... ...... . ...... .. . . ......... .. .... .. . . . .. ... .. ........ ......... ..... ........ ............. . . ... .. .. .. .. .. ... ............... ............ . . . . . .............. . ... .. .. . . . . . ...... .. .. ... ... . .. .......... . .... . . . .. .. .. .. .... .. .............. ...... . .... . . . . .. . .. . ...... ..... ................... . . .. . . . . . ..... .... . . . ........ . . . . . ... .... . .... . . ...... . . . . .. .. ... . . . ... . .. . .. .. ..... ..... .. .. . .... . . .. . .. .. . . ... . . .. .. . ........ . . . ....... .
lowQualScore : 6 6 6 444 00 3 6 6 6 6 66 6 6 00 6 6 00 00 66 0 1 1 1 22222 1 444 7 3 3 6 6 6 7777 9 6 6 00 6 1 1 1 66 3 66 7777 00 66 111111 6 3 6 00 6 7 3 444 0 0 6 0 0 8 8 33333333 7777 0 55 0 0 0 55 0 444444 44444444444444 4444 1 00 7777 5 6 3 55 6 00 555 4 3 66 11111 666666 3 888888 22 1 3 333333333 55 9999 66 0 0 0 22 000 66 00000000 777777777 11111 11111111 0000000000000 0 0 777 11 11 11 33 11 888 000000000000000 111111111111 4 7 9 1 9 66666666666666 6 000 11 11 9 4 9 4 4 222222 11 11 999 888 9 11 4444444444 0 1111 7 0 7 66 99 33 22 0000 99 55555555555555 111111 7 7777 5 7 0 7 88 3 33 3 000000 77777 0000000000000000000 5 7 00 0 0 0 7 7 77777 2222 7 0 0 66666666 7 7 7 7 5 777 6666 8 0000 0 8 000000 0 0 8 8 22 00 000 0 2 7 777 0 99 0 11 99 11111 11111 11 66 4 4444 4 3 99 0 99 44 6 0 555 7 7 99 99 7 55555555 7 7 7 2222222 8
consensus : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-CATCAGCAC-----G--CCTAC--ATA-G--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGCGAG-C--A--C-T-GTTCACCAAAC-T-ACGA--C--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--TTCT--TTTCAAATGAA-A-TTAAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGTA--TTGCTA--CTAGTACA--GTAA------TAACTAA-CATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATCAT-AAAT-ATGT-TAGACTTTCTTTTATGTGATACG--TTTGCAAAATAAGTAG-----ATAT----TA---TGT---A---TTATAAACTCCATGTATAA-TACTAAGCACGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTACAG-TCA-AATCACTGTAAATGCAATTATTTGTNTATGTT---AGGTTTAATAAA----TGATT-AAGCTTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGTCGTAT-TATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--TC-GCTCT--TTAG-TATAACATGCTCCAATTGTAAAAATGTTACCCAAG-T-ATCA-T-CA--GG--GAAA-AGG---C---CCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
Reference ( family-1351 ) : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-CATCAGCAC-----G--CCTAC--ATA-G--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGCGAG-C--A--C-T-GTTCACCAAAC-T-ACGA--C--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--TTCT--TTTCAAATGAA-A-TTAAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGTA--TTGCTA--CTAGTACA--GTAA------TAACTAA-CATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATCAT-AAAT-ATGT-TAGACTTTCTTTTATGTGATACG--TTTGCAAAATAAGTAG-----ATAT----TA---TGT---A---TTATAAACTCCATGTATAA-TACTAAGCACGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTACAG-TCA-AATCACTGTAAATGCAATTATTTGTNTATGTT---AGGTTTAATAAA----TGATT-AAGCTTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGTCGTAT-TATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--TC-GCTCT--TTAG-TATAACATGCTCCAATTGTAAAAATGTTACCCAAG-T-ATCA-T-CA--GG--GAAA-AGG---C---CCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
gi|1 : AAGGGTCCTCCAG-T-GTCGTGGC--AT---T---TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGA---GATTTT--A-CT-----AA-AG--TGTCGT--AACT--CTAA-T-GTAAT-TTCG--A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GC--CT--C-TTCA-A-CA-T-AGAA--G-AT--AATA----A--G--A------CTC-ATAA-CCAT-GGTG--A-G-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-ACGAACG-GGCG-ATCTATAAGTGAAAAA--ACA-------AAA-----TAT-C--TAAA---AC-AATGA--GACT--AC-GATTGTTATTAGTT---TTA--------------CCCTT----ACTGCCC-ACG--AAGTTG----T-A-A-GGT--ATTTCA-TG--TTTA---TGCGAAAGAAAGACGTGGCACTT-----TA------CA-AG------CAATTG--A-TTTTT-CATCAAT-----------CTAC--ATC-G--GGGCTCGTG-A-C-GAC-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NGGA--C-T-GTTCACTAAAC-G-AC-A--G--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TATTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--CTAT--TTTCAAATGAA-A-T-AAA-TGAACGACATGCT-TGATTT--A--GATTATTTGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCATAAG-TA-C--AC-ACTGC-ACC-TATCCGCC---AGGA-CGTAAATTGCTAGACTAGCACA--GTAAG-----TAACTAAACATTAATGACAGGCGAAG--TA--AAT-GGAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATCAT-AAAT-ATGTGTAGACTTTC-TTTATG-AATACGA-TTTGCAAAATAAGTAG-----ATAT----TA---TGT---A---TT-TAAACTCCATGTATAA-TTCTAAACAGGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA-----CCAT----CTAA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTTCAG-CTC-AATCACTGTAAATGCAATTATTTTTTTATGTTCTAAGGTTT-GTAAA----TTATT-AAGC-TTGATTAAT------ATGTATTTGA-CAGA-T-ATTCTCAAAGCATAAACTGGAAATCGA---AG-G-CGTCGCAT-TATTGTAATATTGGGAATTTT-AG-CGA--AAAG-TTTACAGA-GGATGCTCATCA--TATCATAAG--CCATGGT-TT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCA--TTTGGTTTGGGA--TC-GTCTT--TTAG-TATAGCATGCTCCAATTGTAAAAATGTTACCCAAG-T-ATCA-T-CA--GG--GAAAGAGG--------CAGTA-CT-ATGG-ACAG-GAG-ATCAATTA-------AAAGCATGCAC
gi|10 : AAGGGTCCTCCAG-T-GTCGTGGCT-AT---TC--TTG-AGTAA-TTCT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TATTGT--AACT--CTAA-T-GTAAT-TTCGC-----AG-A---Gg
gi|10 : ATTG--T---TTA--------------CCCTT----GCTG-CCCACG--AAGTTG----T-ACA-GGT--AGATCA-TG--CTTA---TGCG-AA-AAAGA--AGGCACCTATAGGTA------CA-AA------CAATTG--A-TTTTT-CATCAGCA---------CCT----ATA-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NNNN--------NTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA---GGA-C-----C-T-GTTCACCAAAC-T-ACGA--CAGT--ACTATTGA---TCGGCCTACA---------------GAATCAGTTGGGTA--------AT--Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattgtttacccttgctgcccacgaagttgtacaggtagatcatgcttatgcgaaaaagaaggcacctataggtacaaacaattgatttttcatcagcacctatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggacctgttcaccaaactacgacagtactattgatcggcctacagaatcagttgggtaatt
gi|11 : aagggtcctccagtgtcgtggctattcttgagtaattctatctcgagacaaagaagattttcacttcaaagtattgtaactctaatgtaatttcgcagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATGACAGGCGAAG--TA--AAT-GAAAGTAAACGTGAAAATATA---------------------------AT-AAATTATGT-TAGACTTTCTTTTATGTAATA------TACAAAATAAGTAG-----ATAT----TA---TATGTAA---TTATAAACTCCATGTATAA-TACTAAGCACAGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT--------T-ACACATGTTGCA-GTACGTACAG-TCA------C-----ATGCAATTATTTGTATGTAT------GTTTAATAAACAATTAATT-AAGCCTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGCCGTAT-TATTG---TATTGGGGAGTTT-AGCCGA--ACAGCTCTACAGAAGGATTCTCATCAGATATCATTAAGCCCATTGCTTT-----TGAT-----AA--A-----------------------CATTT--GGTTTGGAT--CC-GCTCT--TTAGGTATAGCA-G-TCCAATT-TGAAAAT--TACCCAAGGT-ATCA-T-CA--GAGCGAAA-AG--------CTAGTACAT-ATTGCACAGCGAG-A
gi|13 : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-ATAAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TCAAA-AG--TGTCGT--AACT--CTAT-T-GTAAT-TTTGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CTCCC-TTCATA-CA-T-AGAA--GCAT--AATA----A--A--AG-----CTC-ATAACCCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAC-GCGAACG-GGCGAATCT-TAAGTG-AAAACAAC--------AAA----AGATCC--TACACGCACAAATGACAGACTTAACGGATTGTTATTG--T---TTA--------------CCCTT----ATTG-CCCACG---AGTTGTAATT-A-A-GGT--CATTCA-TGGTTTTAT--TGCGAAA-AAAGA--TGGCACCT----TTA------CA-AG------CAATTG--ATTTTTT-CATC-GCA------GTCCCTAC--ATATG--GGGCTCGTG-A-C-GACTTTG-GCCC--TTCTA-----TCTTTCAT---A
gi|14 : tG------TAATTG--A-TTTTTTCATCAGCAC-----GG-CCTAT--ATA-TACGGGATCGTG-AGC-GAA-TTT-G-AC--GTCGACCGTTTCTTCTAT---ATAAATTTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTA----------A--C-T-GTTCACCAAAT-TCACGAACC--TTCATTA--GA---T-GGCCTACAGAATCCCCGGGACAGGAATCAGTCGGGTATTTTTTTTTT--TTTTTTTTTTATACTGGCA-TAAG-TA-ATAA-GC-A--------AAAT----ATGAAC-G-A--TTCT--TTTC-AATGAACATTTAAA-TGAGCGACATGCTGTGATTA--AGTGACTATTTGTGGGCA--TCTGT---ACAGTGACGTGATCTGTATTACGTTTACAGTGTTTCTAAGCTA----GT-AC-GC-A-------CGGCAACAGG--CGTA--TTGCT----CAGGACA--Gaattt
gi|15 : ATA-CA-T-AGAA--G-AT--AATA----A--A--AGA----CTC-ATAAATCAT-GGTG--AAG-ATAAAAAAAAAGCGT---GACTGAGAAAT-CCCGAGAT-AAGAACG-GGCA-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--TT-GATTGTTATTG--T---TTA--------------CCCCT----ACTGCCCCACG--AAGTAG----TAA-A-GGT--GGATCA-TG--CTTA---TGCG-AA-ATAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-TATCAGCATCG---G--CCTA
gi|16 : G-AGTAA-TTTT-A-TCTC-GAGATAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTAA-T-GCAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-AT--C-TTCATA-CA-T-AGAG--G-AT--AATA----ACAAT-A------CTC-ATAACCCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-ACGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-AGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTG-CCCAAG--AAGTTG----TAA-A-GGT--TCTTCA-TG--CTAA---TGC-AAA-AAAGA--TGACACCT----TTA------CA-AG------CAATTG--A-tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcacctgttcaccaaa
gi|2 : AA----AG-T-C--TAAAC--AC-AATGAC-GGCT--AC-GATTGTT-------------------------------T----A-TGCCCCACGCTAAGTTG----T-A-AAGGTTAAGATCA-AG--CTTAA--TGCGAAA-AA-GA--TGGCACCT----CTA------CA-AG------CAATTGCGA-TTTTT-CATCAGCACCACCGG--CCTAT--ATA-G--GGGCTCATG-AAC-GAA-TTG-AACC--GTCTA-----T--TCTGT----T----TTA-----CATT--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAG-C--A--C-TTGTTCATTAAACAT-G-GA--C--T--ACTA--GGCCTTCGGCCTACA---------------GAATCAGTCGGGTA------------TTTTATTTTT-CACCTGTACTAA-TTACATAAAGCAA--------AAATT-AAATGAAC-GGA--TTCT--TTTCAA-TGAA-A-TTAAACTGAG-----------------------------GT--GCA--TCTTTGT-A---TTA--TGAT----------TGTA-AGT-TGCTTAAG-TA-CCGGTGAC-GCCACCCCATCTGCC--CAGGATCGTA--TTGCTAG-CCAGTAC-----------------TA--CATTAATGACAGGCGAAG--TA--AATCGAAAGTGAACGTGAAA-TACAT-A--------------ATAAAATATCAT-AAATTATGC-TAGACTTT-TTTTATGTGATATG--CCTGGTGAATAAGTAGTGGTTACAT----TA---------A---TTATAAACTCACTG-ATAA-TA----GCATGGCTTTATTAG-AT-AAACTTGAGAAAAAAGAA-TATA----GCCATGGATCTGA-TTTTCATCTCCACAGTA-ATT----AACTT-ACACATGTTGCAAGTACGTACAAATCATAATCACTGTAAATGCAATTATTTGTGGGTGGT---AGGTTTAATAAA----TGATTTCAGTTTTGATTAAT------ATGTATTTGA-CAGAATAATTCCTGAAGC-TAAACTGAAAA--GATCGAGTGCCGTCGTAT-TATTG---TATTGGGGATTTTTAGCCGA---CAGCATTACAGA-GAATGC-CATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATACGAATTTTTGGTTTGGGAGTCC-GCTCTTCTTAG-TAT-ACATGC-CGAATTGTAAAGAAGTTACCCAAT-T-ATCA-TGCA---G--GAAA-AGGTATT---CCAGTACCTGATGGCACAG-GAGAACAAATTAAAGGGGAAAAGCA-GCAC
gi|21 : TAC-AT----GAATA-ACATTTTGAGTT-GGGG--TC-GCTCT--TTAG-TATAACATGGTCCAATTGTAAAAATGTTACCCAAG-TAATCA-T-CA--GG--T--A-AGG---CATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCACatgtaaaaagattagttcaactgttttaagattctaccaaggggaggtaataatttgcagttaatattatgtaaattt
gi|22 : ATTCGT--GCA--TCTTA---A---TTA--TG-T----------TTTACAGTGTTCTAAAT-TA-CC-GC-AC-GC-ACCCTATCCGCC--CAGGG-CGTA--TTGCCA-----GTACA--GTAA---------CTA--CAGTAATGACAGGTGAAG--TA--AAT-GAAAGTGCACGTGAAAATACAT-ACTGTATTGAA-GGTATCAAATATAAT----T-ATGT-TTGACTTTCTTTTATGTGATA-----TTACAAAATAAGT-------AT---------------------TTATAAACTCCATGTATTA-TA--AAGCtgtccatttttaagacacttgcaagggaggtaattaaatttgcaggtaatattatgttgggtttttttttttgcccattcttcaaaaattcaccagaaaaaaattaaattctaa
gi|23 : AGGGTCCTCCAG-T-GTTGTGGCC-AC---TC--TTG-AGTAA-TTTT-A-TCTT-GAGACA---AA--GATTTTC-A-CC--TC-CA-AG--TATTGT--AACTG-CTT--T-TTAAT-TTCGA-G---AG-C---GTG-A-A-TG
gi|23 : ttgtCGAGA-GCGT---GAATGGGAAAT-CCCGAGAT-AAGAAAG-GGCG-ATTTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--GC-GATTGTTATTG--T---TTA--------------CACTT----ACCGCCCCACG--AAGTTG----T-A-A-AGggaaatcccgagataagaaagggcgatttataagtgaaaaacaacaaaaagatctaaaccacaatgacggctgcgattgttattgtttacacttaccgccccacgaagttgtaaagc
gi|24 : ttgtagggtcctccagtgttgtggccactcttgagtaattttatcttgagacaaagattttcacctccaagtattgtaactgctttttaatttGGTCCTCCAGTT-GTCGT-GCC-A----TCGGTTGTAGTAAGTTTTAA-TCTCGGAGACAAAGAATTGATTTTCGA-GTTATC-AAGAG--TGTTGTTGTACTGCCTCA-T-ATAATGTTCGC-ATATAGTA---TTT-A-AGTGTGAC-TT-ACATTGCAT-GCT-CT--C--TCATAGCATT-AGAA--G-ATAAAACA----A--A--AATTGATCTC-AT-AACCAT-GGTGTCAAGTATAAAC-AAA-GCGTTGGGGATGAc
gi|25 : ta--TTCTA-----T--TCTAT---AT----TTA-----CATN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGC--A-C-----C-T-GTTCACCAAAC-C-ACGA--C--T--A-TA--GA---TCGGCCTACA---------------GAATCAGTTGGGTG--------A---TTTTTTTTTTGCACCTGTATTAAATCACATCA-GCAA--------A-----AAAT-AAC-G-G--ATTA--TTTCAATTAAA-A-TTAAA-T-AGCGAAATGCT-TGATT
gi|28 : ccgAAGGGTCCTCCAG-T-GTCGGTGCC-AT---C----TG-AGTAA-TTTT-AATCTC-GAGACAAAGAAT-GATTTTC-AGTT--TC-AA-AAGTTGTTGT--AACT--CTCAAT-ATAAT-TTCGCTA---AG-ATTTGTTTA-A-TGTG-A-TT-A----GCATTGCAGCT--C-TCCATA-CA-TTAGAA--G-AT--AAAACAAAA--A--A------CTC-ATAA-CCA--GGTG--AAG-ATAAACAAAA-GCGT---GA
gi|29 : tACGTGAAAATACAT-A-AGTATTAAAAGGTATGAAATATCATGAAAT-ATGT-TAGACTTTCTTTTATG-AATACGGATTTGCAAAATAAGTAG-----ATAT----TACTATGT---AACTTTTTAAACTCCATGTATAA-TA---AACACGGCTTTAT-AGCATAAAACTTT-GAAAAAA-AG-T-TATCCCGGCAT----CTAATTTTTCATCT
gi|3 : TG--CTAGTACA--GTAA---------CTA--CATTTATG-----CGAAGGTTACCAAT-GAAAGTGGACGTGAACATACATTA-TGTATTAAA-GGTATGAAATAT-------T-ATG------CTTTCTTTTATGTGATA------TACAAAATAAGTAG-----ATATATTACA---TGC---AA--TTATAAACTCCATGTATAAATACTAAGCACAGCTTCAT-AGCAT-AAACTTT-GAAAAGA-AAATATA----GT-AT----CTGA-TTTTCATCTCTG-AGTAAATT----AAT-T-ACACATGTTGCA-GTACTTA--G-TCA-AATCACTGTAAATGCAATTATTTGT--ATGT----AGGTTTAATAAAA---TGATT-AAGCTTTGATTAAT------ATGTATTTGAACAGA-TAAT------------AACTGGAAA--GA---AA-GTCGTCGTATATATTG---TATTGGGGATCTT-AGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCACCAG--CCATTACATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-ACA-TTTTGGTTTGGGG--TC-GCTC---TTAG-AATAACATGGTCCAATTGTAAAAATGTTACCTAAG-T-ATCA-T-CA--GG--GAAA-AGG---CATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
gi|32 : ACA---------------GTATCAGTCGGGTA--------ATA-TTTTGTTTTTGCACCTGTACTAAA-----------------------------ATGAACAG-A--TCCT--TTTTAAATCAA-T-TTAAA-TAAGTGCCATGCT-TGATTA--A--GACTATTCGT--ACA--TTTTT---A---TGA--GGAT----------TTTACAGTGTTCTTATG-TA-CT-GC-AC-Gatgtaaccatttttaagattctgcaaaggggggtaattaaatttgcaggtaatattatgttggttttttccctcattcttcaaaattcaccagcaaaaaaaaataaattcta
gi|33 : caAAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-GT--TC-AA-AG--TGTTGT--AACT--CTCA-T-ATAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GCAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--
gi|35 : tATA-CA-T-ATAAATG-AT--AAAA----G--A--A------CTCCATAAATCATAGGTA--AAG-ATAAACAGAA-CCGTTT-GATTGAGAAATCCCCGATAT-AAGAAC--GGCG-ATCTATAAGAGAAAAACAACA-------AAA----AG
gi|36 : CGTTGCATT-----TGAT------A--ATT--TGTGGTAT----AATCA-GCATTTTGGGTTTGGGA--TTTGTTCT--T-AG--ACAACAT--CCCAATGGTAAAAAAATTACCCAAG---ATCATT-CAGTGG--GAAA-AGG---C---
gi|37 : tGATGCTCATCA--TATCATCAG--CCATTGCATTGCATTTGAT-----TATAATTG-TGTAG-ATCTATGAATA-GCATTTTTGGTTTGGGA--CC-GCTCT--TTAG-TACAACATGCTCCAATTGTAAAat
gi|4 : AAGGGTCCTCCAG-T-GTAGTGGCC-AT---TC--TTG-AGTAA-TTAT-A-TCTC-GAGACAAAGGA--GATTTTC-A-CT--TT-CA-AG--TATTGT--AACT--CCTA-T-GTAAT-TTGGC-A---AG-A---GTT-A-A-TGTT-CTTT-C----ATAT-GCA-CT--C-TTCATA-CA-T--GAA--G-AT--ATTA----A--AAGA------CTC-ATCAACCAT-GGTG--AAG-ATAAACGAAA-GCCT---GAATGAGAAAT-ACCGAGAT-AAGAAAG-GGCG-ATCTAAAAGTGAAAA--AACAGAGCTCTAAA----AGAT-CTATAAAC-CAC-AATGAC-GGCT--GC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----TAA-A-GGT--AGATCA-TG--CTTA---TGCG-AA-AAAGA--TGACACCT----CTA------CA-AG------TGATTG--A-TTTTT-CATCAGCA---------CCTACATATA-G--GAGCTTATC-A-C-GAA-TTG-G-CCCTTTCT
gi|4 : tTCACCAAAC-T-ACGA--C--T--A-TA--GA---TCGGCCTACA---------------AAATCACTCGGATA--------ATA-TTTTTTTTTTACACCTGTACTAAATCACATAA-GCAA--------T--TT-AAATGAAC-GGA--TTCT--TTTCAAATGAA-A-TTAAA-TAAGCAACATGCT-TGATTT--A--GACTATTCGT--GTA--CCTTT---A---TAA--TGAT----------TTTACAGTGTTCTTCAG-TACC--GC-AC-GT-ACCAAATCCGCC--CAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaccaaactacgactatagatcggcctacaaaatcactcggataatattttttttttacacctgtactaaatcacataagcaatttaaatgaacggattcttttcaaatgaaattaaataagcaacatgcttgatttagactattcgtgtacctttataatgattttacagtgttcttcagtaccgcacgtaccaaatccgccca
gi|40 : taagggtcctccagtgtagtggccattcttgagtaattatatctcgagacaaaggagattttcactttcaagtattgtaactcctatgtaatttggcaagagttaatgttctttcatatgcactcttcatacatgaagatattaaaagactcatcaaccatggtgaagataaacgaaagcctgaatgagaaataccgagataagaaagggcgatctaaaagtgaaaaaacagagctctaaaagatctataaaccacaatgacggctgcgattgttattgtttacccttactgccccacgaagttgtaaaggtagatcatgcttatgcgaaaaagatgacacctctacaagtgattgatttttcatcagcacctacatataggagcttatcacgaattggccctttctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnT-AAATGAAC-GGA--TTCT--TTTCAAATAAA-AATTTAA-TGAGCAACATACT-TGATTT--A--GACTATTCGT--GCA--TTCTTATGA---TTA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--
gi|42 : C-GC-ACCCTATCCGCC--CAGGA-CGTA--TTGCTA---TAGTACACTGTAACAG---TAACT-A-CATCAATGACAGGCGAGG------AAT-GAAAGTGAACGTAAAAATACATAA-TGTc
gi|43 : A-AA-TATA----CCCAT----CTGA-TTTTCATCTCTG-ATTACATTTAAAA---TTACACATGTTGCA-GTACGTTCAG-TCC-AGTCACTGTAAATGCAATTATTT-TTTAT
gi|44 : -TG--CTTAATATGCG-AA-AAAGA--TGGAACAT----CTA------TGTAG------CAATTG--A-TTTTT-CACCAGCA---------CCTAC--GTA--------T--TG-A-C-----------CC--TTCTA-------TTCTAT---AT----TTA-----CAT
gi|46 : TAT-GATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCCACATA-GGATGTTCATTA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-
gi|48 : t-AGCCGA--ACAGCTCTACATA-GGATGCTCATCA--TGTCATTAG--CCATTGCAAT-----TCAT-----TA--ATTG-TGTAG-AT----GATTA-GCATTTT
gi|5 : TGA-C-GTAAT-TT-G--A---AA-A---GTT-ACA-TTAT-T-TT-A-----CAT-----CT--CGTTC-------T-A-------AT--AAAA----A--A--A------CTC-ATAAACCAT------------------AAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCAATAAGTGAAAAACAATA-------AAA----A------------------ATGAC-GGCT--AC-GATTGTTATTG--T---TTACCCCCGGGTGTTTACCCTTTAATACTGTCCCACG--AAGTTG----T-A-AAGGA--AGATCA-TG--CTTG---TGCGAAA-AAAGA--TGGCACCT----CTATAGCTACA-AG------CAATTG--A-TTTTT-CATCAGCACCG---G--CCTAT--A-A-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NNTT--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG-C--A--CCT-GTTCACCAAAC-T-ACGG--C--T--A-TA--GA---TCGGACCACA---------------GAATCAGTCAGGTA--------ATATTTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATAAAC-A-AAATTCT--TTTCAAATGAA-A-TTGAA-TGAGCGACAAGCT-TGATTT--A--GACTATTCAT--GCA--TCTTT---A---TTA--AGAT----------TTTACAGTGTTCTTAAG-TACC--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGTA--TTG-----CTAGTACA--GTAACTACATTAATCAA--ATTAATGACAGGCGAAG--TA--AAT-GGAAATG
gi|53 : A---TGCGAAA-AA-GA--TGGCACCT----ATA------CA-AGTAAAAGCAATTG--A-TTTTT-CATCAGCAC-----
gi|55 : -ATCA-T-CA--GG--GAAA-AGG---C-----AGTACCT-ATGACAAAG-GAG-ATCAATTA-------AAAGCATGCcta
gi|57 : -T-GTAGT-TTCGC-A---AG-A---GTT-A-A-TGGT-T-TTAA----GTAT-GCA-CT--C-TTC-TA-CA-T-AGA
gi|58 : GGATTTT-AGCCGAGAACAGCTCTACAGA-GGATGCTCATCA--TGTg
gi|59 : AGGGTCCTCCAG-T-GTCGTGGCCGATATGTC--TTG-AGT
gi|6 : tAAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-GGTAA-TTTT-A-TCTC-AAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TAATGT--AACT--CCTA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-CTCACA-GA-C-AGAA--G-AT--AATA----A--A--AGG----CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GTTT---G-ATGAGAAAT--CCGA-ATAAAGAACGCGACG-ATCTATAAGTG-AAAACAAC--------AAA----AGAT-C--AAAAC-CA--AATGA---GC---AC-A--TGTTATTG-------TA--------------CCCTTA---ACTGCATCACG--AAGTTG----T-A-A-GGT--ATATCATTG--C-TA---TGGGAAA-AAAGA--TGGCACCT----CTA------CA-AA------CAATTG--A-TGTTT-CATCAGCACCG---G--CCTAT--ATA-A--GG--TCGTGAA-CAGAA-TTGTA-CCT-TTCTA-----TCCCAAATAAAAT----TTACCCCCCATTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGAATC--AACC-T-TTCCACCAAAC---------C--T--AC---------TCG--CTATA---------------GAA-CAGTC-GGTA--------G-------------------GTA-TAAATTAAATAACGCAA--------AAATTGAAAT--ACGG-A--TTCTTCTTCCAAAT-AA-A-TTAAA--GA-CAATATGCT-TGATTTTCA--GACTACATGT--ACAATTCCTG---A---TCA--TGAT----------T
gi|7 : tt---T-ACACATGTTGCA-GTACGTACAG-TCA-AATCATTGTAAATGTA---ACTTGTAT---TT---AGATTTAATAAA----TGATT-ATGCTTTGATTAATATGTACATGTATTTGA-CAGA-TAATTATCGAAGCAGAAACTGGAAA--GA---AG-GACGTCGTAT-TATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCTACAGA-GGATACTCATCA--TGTCATCTG--CCATTGCATT-----TGATATTAGTA--ATTATTGTAG-AT----GAATA-GCA-TTTTAGATTGGGA--TC-GCTCT--TTAG-TATACCATGCTCCAAaacacatttgcagt
gi|8 : ttaatTCCTCTAG-TTGTCGTGGCC-AT---TC--TTG-AGTAA-TTT--A-TCTC-GAGACAAAGA-----TTTTC-A-CT--TC-AA-AG--TATTGT--AATC--ACTA-TAGTAAT-TTCGC-----AG-A---GTTAA-A-TGTT-C-TT-A----G-AT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--AAG----CTC-ATAAACCAT-GGTG--AAG-AT-AAC-AAA-GAGT---GAATGAGACAT-CCCGATAT----AACG-GGCG-ATCT-TAAGTGAAAAGCAACG-------AAACCAGAGGC-T--TAAAC-CAC-AATGAC-AGCT--AC-GATTGTTATTG--CTAATTA--------------CTCTT----ACTGCCCCACG--AAGTTG----TAA-A-GGC--AGATCA-TG--CTTA---TGCG-AA-AAAGA--TGGCACCT----CTA------C--AG------CAATTG--A-TTTTT-CACCAGTA---------CCTAN--NNN-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NTTN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG-C--AC-C-T-GTTCACCAAAC-T-ACGA--C--T--AC-A--GA---TCGGCCTGCA---------------GGATCAGTCGGGTA--------A----TTTTTTTTTACACCTGTAATGAATTACATAA-TCAATGACAGGCGAAGT-AAATGAAccatttaagggggaaagcatgtacatgcaaaaagattagtccagctgtttttaacctttttttagattctggaaatagagataattaattttgcagctaatattatgtaaatttcattttccctcattcttcaaaattcaccagcaaaaattaaattctaattgatatattttatacatatactaattactattacatgtacatgtatgttaaaatttgaaacaaaattttgtagttattattttgtttttcatttttgtaatatatatgcattgcattttttttatatatgtctgatatgttttatatttatttt
blockSeqs : T T G ATG GG T G A A G TT G G TA A G GT TG GC A A A G ATAT T TTT T C G A T A CATT T G CC G G T T AT C AA CAAA CA AG ATTGAT C C A TC T A A TGG C A C A AGAGCTCT CCAG C TA G A A TA G CTAA CCCCCGGGTGTTTA TAAT C CT TAAT A C A TA T GT ATA A . . ATAGG TAGCTA T TAAAAG CG T T CCACCGG AT TAC NN A G A CT GC CT CCGTTTCT ATAAAT CCCCC CAANNNNN AGTGAATCAAC C T TC AC AG TC CT TT CCT GAATCCCCGGGACAG TTTTTTTTTT A C T C A TGACAGGCGAAGT G GG AA TC G C T C G AAGT GG AT ATG CAG CG CTGTATTACG C CCG G . C CC AA AT . AGC CT CTACATTAATCAA GTTACC C ACT G A A C GA T T T CGGATT TGGTT TACTATGTAACT A A CT T A A G A TCCCG GGAT T C C TAAAA T A A T G ATG T CAAT T C ATGTAC A A AT . TCG T C A . T GA A GA GC GCATT ATTAG TA AT T CTAT C T GT T TC GT C G GT T G GT GC . TATTC G C A AAGGGGA
blockSeqs : . . . . . . . . . . T . . . . . . . G A . . . TA . . A . . . . . . . . . . . . . . . . . . T GA . A . . . A . TT . . . . A . . . . . . . . T . A C . . A . A . . . T A . . T . . . . . . TCGG . TG GC . A . N AA T NNN AAAAT . . NNNNAGCAC . . AT . . . TT . . . ATAT G T T C C AAATTG G AG . . G . A . . TTCA . . GT . . . . CC . . . CT . G . GC . CAGTAACTA TA . TAT A . C A A T C T TGCC . ATTACATGCAA A . CT . . . . . G . . . A AACT . . . . G GGG T A . T . . . AG . . . C . . . . . . . . . . G . . . T . . . T G G TA . . . . . CATTC . . . AAGGGC
blockSeqs : . . . . . . . . . . . . . . . . . . . A . . . A . . . . . . . . . . . . . . . . . . . . . . GG . C . . . A . . . . . . A . . . . . . . . T . . C . . A . . . . . A A . . C . . . . . . CCGG . N GA . . . A TA . TCT NN . . NNTGAGCA . . T . . . CT . . . ATA G C T C . AAATT G GG . . A . . . . AA . . . . . . . CT . . . AA . A . A . CTA TA . AAT A . G C A . T T T . TATATGTAA A . . . . . . . G . . . C AAT . . . . G TTA . . . T . . . T . . . T . . . . . . . . . . G . . . T . . . T G G T . . . . . CATTC . . . AAGGGC
blockSeqs : . . . . . . . . . . . . . . . . . . . T . . . A . . . . . . . . . . . . . . . . . . . . . . AG . A . . . G . . . . . . A . . . . . . . . T . . C . . A . . . . . . A . . T . . . . . . CCGG . G GC . . . A N . NNN AT . . NNNNAGCA . . C . . . T . . . ATA A C T C . AAATT G GG . . C . . . . TA . . . . . . . CC . . . CT . A . A . CTA TA . AA . . G . . . T T . . TAA T . . . . . . . G . . . . . . . . . G AT . . . T . . . . . . . A . . . . . . . . . . G . . . T . . . A C A T . . . . . C . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . C . . . G . . . . . . . . . . . . . . . . . . . . . . G . A . . . A . . . . . . A . . . . . . . . T . . T . . . . . . . . . A . . C . . . . . . GTC . G GC . . . A G . TCC AT . . AGCAC . . T . . . T . . . AT A C T A . AAAT G GG . . G . . . . TA . . . . . . . CC . . . CT . . . C . TA TA . A . . . . . . . . . . . A . . . . C . . . . . . . A . . . . . . . . . . G . . . T . . . T C . . . . . . . C . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . C . . . A . . . . . . . . . . . . . . . . . . . . . . . . A . . . A . . . . . . A . . . . . . . . T . . C . . . . . . . . . A . . C . . . . . . CGG . N NN . . . N G . NNN NN . . GGAC . . T . . . T . . . A A A T C . TTT A G . . A . . . . TA . . . . . . . C . . . . . . . . . . . . . . . . . . G . . . T . . . T . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . C . . . A . . . . . . . . . . . . . . . . . . . . . . . . A . . . G . . . . . . G . . . . . . . . T . . C . . . . . . . . . . . . C . . . . . . . . A NN . . . A N . T NN . . A . . T . . . C . . . G . . . . . A G G . . G . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . T . . . A . . . . . . . . . . . . . . . . . . . . . . . . A . . . A . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . C . . . . . . . . N . . . . N N . T T . . . . . C . . . A . . . . . . . A . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . G . . . A . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . . . . . . . T . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . T . . . A . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . C . . . . . . . .
blockSeqs : . T . . . . . . . . . . . . . . . . . . . . . . C . . . . . .
blockSeqs : . . . . . . . . . . . .
blockSeqCons : T***** ** C**** AGTGAGCAC**** T* TA********** GG* CC** CT ** A*** CTA*********** AAT* T* T***** TACATGCAA********** ** G**** AA****** **** ** *** T** CATTC*** AAGGG**
originalCons : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-CATCAGCAC-----G--CCTAC--ATA-G--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGCGAG-C--A--C-T-GTTCACCAAAC-T-ACGA--C--T--ACTA--GA---TCGGCCTACA---------------GAATCAGTCGGGTA--------AT--TTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-G-A--TTCT--TTTCAAATGAA-A-TTAAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCTTAAG-TA-C--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGTA--TTGCTA--CTAGTACA--GTAA------TAACTAA-CATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACAT-A-TGTATTAAA-GGTATGAAATATCAT-AAAT-ATGT-TAGACTTTCTTTTATGTGATACG--TTTGCAAAATAAGTAG-----ATAT----TA---TGT---A---TTATAAACTCCATGTATAA-TACTAAGCACGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATA----GCCAT----CTGA-TTTTCATCTCTG-AGTACATT----A---T-ACACATGTTGCA-GTACGTACAG-TCA-AATCACTGTAAATGCAATTATTTGTNTATGTT---AGGTTTAATAAA----TGATT-AAGCTTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGTCGTAT-TATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--TC-GCTCT--TTAG-TATAACATGCTCCAATTGTAAAAATGTTACCCAAG-T-ATCA-T-CA--GG--GAAA-AGG---C---CCAGTACCT-ATGGCACAG-GAG-ACCAATTAAA-GGGCAAAGCATGCAC
finalCons : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTGT-----TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACCTC----TA------CA-AG------CAATTG--A-TTTTT-CATCAGCAC-----G--CCTAC--ATA-G--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGTGAGCAC----C-T-GTTCACCAAAC-T-ACGA--C--T--AT-A--GA---TCGGCCTACA---------------GAATCAGTCGGGTATA----------TTTTTTTTTTACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAACGG-A--TTCT--TTTCAAATGAA-A-TTAAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCTTAAG-TACC--GC-AC-GC-ACCCTATCCGCC--CAGGA-CGTA--TTGCTA---TAGTACA--GTAACTA-----------CATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACATAAT-GTATTAAA-GGTATGAAATATCAT-AAAT-ATGT-TAGACTTTCTTTTATGTGATAT-----TGCAAAATAAGTAG-----ATATTACATGCAA----------TTATAAACTCCATGTATAA-TA--AAGCACGGCTTTAT-AGCAT-AAACTTT-GAAAAGA-AA-TATAG----CCAT----CTGA-TTTTCATCTCTG-AGTACATTAA------T-ACACATGTTGCA-GTACGTACAG-TCA-AATCACTGTAAATGCAATTATTTGTNTATGT----AGGTTTAATAAA----TGATT-AAGCTTTGATTAAT------ATGTATTTGA-CAGA-TAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGTCGTAT-TATTG---TATTGGGGATTTT-AGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--TC-GCTCT--TTAG-TATAACATGCTCCAATTGTAAAAATGTTACCCAAGT--ATCA-T-CA--GG--GAAA-AGGCATTC---CAGTACCT-ATGGCACAG-GAG-ACCAATTAAAGGG--AAAGCATGCAC
22 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): ATGCATGTAAAAAGAATTAGGTTCTGTTTGTAACCATGTTTTAGATTCTGCAAAGGGAGGTAATTATTTTTGCAGCTAATATTTATGTAATTTTATTTTTCCCCATTCTTCAAATTCACAGCAAAAAATTAAATTCTAATGTGATATATTTCATACATTCTATTACTATTGATGTTAAAATTTGAACAAAATTTGTGGTATATTATTTTTTTTTTTATTTTCATTTTTGTTATAATATATGATATCGCATTTTTTTTTAAATATTCTAATTTTTTATTTAAGTTTTATTTGGTTATTGATGGGTTTTTATATTTGATATATCATTAATTATTGTATTTCTAGCCATTTCTTTGTTTTTTTGTATTTAAATTGTTTTGTTTGTTTCATGCAACATTAATGTGCAATGACATTAGAAGTAATAAATCATAAAATATATGCTAATTTTGTTATTGTCTTTGATGTTAAATTATGTTATATGGTATATTCAACAGCCTGCTGTTGTTTATGATTTTGGGACTTAAAACTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|12 ): TTTTTTTCCCCATCCTTCAAGATTCAACAGCAAAAAAAATAATAAATTCTAATTGATATATTTATAAATATACTGATTACCATTATGTTCAAATTTGAAAAAAATCTTGTGGTTATTATTTTTTTAATTTTCATTTTTGTTATATATATGAATTGCATTTTTAAAAAATATTCTGATAATTTTTATATTTATGTTTTGCTATTTGGTTTTGATGGGTTTTTTATTTGATATATTATTGTTGTTATGTATTTTGCCTATTTCTTTATTTGTTTTGTATCTAAATTGTTTTTGTTATGTGTTCATGCAACATATGTGCAATAACATTACAAGTAATAAATCATAAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTATATGATTATGCCAAGTAACCATGCTAGTTTTATGAATTTTGGAAAAACAATTGGTTGACC
Unaligned ( gi|17 ): TTCTAATTGATATATTTATACATATATACTGATTACCTTTATATTTAAATTTGAACAAAAATTGGTCATTAATTTTTTTTAATTTTTGTTATTATATATTGAATTGCATTTTTAAAAAAAATGTTCTCATATTTTTGATATTTTATGTTTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCGACATGTATTTATTTTTTATTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATTATGTGCAATAACATTAGAAGTAATAAATCATAAAAAAATATGGCTAATTTGTT
Unaligned ( gi|18 ): TTAATTTTGATGGTTTTTTTTTTAAATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTTGGATTGTATTTAAATTTTATTGTTATGTGTTCATGTAACATTATGTGCAATAAATTAGAAATAAAATAAATAATAGAAAATATGGCTAATTTTGTTATTGTCTTTGGTGTTTAATTATGTATATATTATCCAAGTAACCATCTGGTTTTATTGTTGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTTAA
Unaligned ( gi|19 ): TAATTTTGATGTTTTATTTTTTTAACATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTGGATTGTATTTAAATTTTATTGTTATGTTTCACTAGTAACATTAGGTGCAAGTCAACAATTAAAATAAAATAAATAATAAAAATGCTAATATTGTTATTGTCTTTGGTGTTGAAATTATGTATCATGATTACAAGTACATCGCTGTTTATAATTGGAGGGGGGGGCTTAGGATGACCCTTCACCTCCTTA
Unaligned ( gi|20 ): ACATATACATATTATGTTAAAATTAAAAAAAATGTATTGTTGTTATTATGCTTTTTATTTTCATTTTTGTTATAAATATAAATTGCATTTTTTTAATATTCTATTTTTTATATTTAAATTTTGTTATTTAGTTTTGATGGGTTTTTTTTATTTGATATATTATCATTGCTATGTATTTTGTCTATTTCTTTCTTTGTTTTGTATCTAAATTGTTTTTGTTGTGTGTTCATGTCTCATTGTGGGCAATAACATT
Unaligned ( gi|26 ): CTGATTACTATTAAGTGAAAATAAGAACAGAATATTGTGGTTATTATTATAATTTTTTTTTTCATTTTTGTAATATATATGAATTGCATTTTCTTTTCCTTTTTATATTCCTATAGTTTTGATTTTTTTTTATTTGGTTTAATGGGTTTTTTTTTTATTGATATATTATTTTTGTTAAGTATTTTGCCTATTTCTTTGTTTGTTTTGTA
Unaligned ( gi|27 ): TTGTTATTGATTTTGGTCGGTTTTTGTTATTTGATATATTATCATGTTATGTATTTTGCCTATTTCTTTTTCTTTTGTTTTGTATTTAAATTGTTTTGTTATGTGTTCATCTAATATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAACTGTGTTACTGTCTTTGACGTTAAAACTATGTATATG
Unaligned ( gi|30 ): ATTTCTTTATTTGTTTTGTATGTGTTCATACAACATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTAAAGGTAGAAGCCAAGTAACTATGCTAGTTTTATGAATTTTGAAGAAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|31 ): TTAGCTCAGCTGTTTGTAAGAATTTTTGTTTAGATTCTGCTAAGGGAGGTAATTAATTTTGCAGCTATGATTATGTAAATTTCATTTCTTCCCCATTCTTCAAAATTCACCAGCAAAAGAAAATTTAAATTCTAATTGATATATTATATAT
Unaligned ( gi|34 ): TTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCTACATGTATTTATTATTTGTTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATNNNT
Unaligned ( gi|38 ): TTTGCCTATTTCTTTGTTTGTTTTGTATTAAAATGGTTTTTGTTATGTGTTTATGTAGCATTATGTGCAATAACATTAGACGTAAAATATGGCTAATTTTGTTATTGTCTTT
Unaligned ( gi|39 ): ATGTGCAATAACATTAGAAAGTGTTACTGTCTTTGATGTTAAAATTATGTATATAATTATATCAAATTTATGAATTTTGGAGAGAAAAACTTGATGACCCTCCAGCATTCTT
Unaligned ( gi|41 ): ATTGTGTTACTGTCTTTGATGTTGAAATTATGTATATGGTTATGCCAAGTGACCATGCTAGTTTTATGAATTTTGGAAAAATAATTGGATGACCCTCCAGCCTC
Unaligned ( gi|45 ): CGTGTAACAAAGATAATGTTCAGCTGTTTTACTGCTTTTAGATTCTCCAATAGGAGAAATTAATTTGCAGCTAATAATTAGTAAATTTTT
Unaligned ( gi|47 ): GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|49 ): AACCATGCTAGTTTTATGCTTTTTTCGAGGGGAGGGGGGGGGGGGGGGCGACCCTCCTGCCTCCTT
Unaligned ( gi|50 ): GTAACCATGCTGGTTTTATGAATTTGGGAGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|51 ): GTAACCATGCTAGTTTTATAAATTTTTTTGGGGGGGGGGGAAATGGATGACCATCCGGCCTCCT
Unaligned ( gi|52 ): CAAGTAACCATGCTAGTTTTATGAATGGGGGGGGGGGGATGGATGACCCTCCAGCCTCC
Unaligned ( gi|54 ): TAATCATGCTAGTTTTATGAATTTTGGATAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|56 ): GCTAGTTTTATGAATTTTGGGGGAAAACTTAGATGACCCTCCAGCCTCCTTA
Alignments
lowQualScore : 222222 111 11111111 111111 22222222222222 1111 1 111 1 444444444 1111 111 11111111 11111 22222222222222222222222222222222222222222222222222222222222222222222222 11111111111111 222222222222222 2222 222222222 222222222222 111 1111111111 22222222222222222222222 222222222 33333333 2222222222 222222 2222222 22222222222 333333333 11 1111 2222 222222 11 111 111 11111 11111 3333333
lowQualScore : 3 3 3 666 55 3 3 3 3 3 88 3 3 55 3 3 55 55 88 1 3 3 3 88888 3 555 6 3 3 3 3 3 7777 0 3 3 55 3 3 3 3 44 3 44 7777 55 88 999999 3 4 3 55 3 3 3 000 4 4 0 4 4 0 0 55555555 7777 4 55 4 4 4 55 4 000000 11111111111111 1111 5 55 7777 4 3 7 55 3 55 222 1 3 44 88888 999999 3 888888 44 3 3 666666666 555 0000 11 3 7 3 44 000 77 33333333 999999999 00000 66666666666666666666666666666666666666666666666666666666666666666666666 4 44444444444444 66 8 4 777 555555555555555 9999 4 333333333 5 2 1 8 555555555555 4 1 4 66 4 1 4 4 4 4 4 888888 66 66 333 777 0 66 9999999999 5 2 77 5 5 4 0 0 77 88 99 99999999999999999999999 99 666666666 888888 5 8888888888 1 11111111 88 6 99 1 6666666666 1 99 6 000000 3 6666666 6 8 8 8 6 6 66666666666 6 8 5 444444444 6 6 6 6 77 6 7777 0 5555 8 3 333333 8 8 0 0 66 11 444 8 8 6 111 5 66 5 66 66 11111 11111 66 44 4 9999 4 7 66 5 66 5 0 5 7 6 5 5 5 77 77 5 8888 6 6 6 8888888 0
lowQualScore : . . . ... .. . . . . . .. . . .. . . .. .. .. . . . . ..... . ... . . . . . . .... . . . .. . . . . .. . .. .... .. .. ...... . . . .. . . . ... . . . . . . . ........ .... . .. . . . .. . ...... .............. .... . .. .... . . . .. . .. ... . . .. ..... ...... . ...... .. . . ......... ... .... .. . . . .. ... .. ........ ......... ..... ....................................................................... . .............. .. . . ... ............... .... . ......... . . . . ............ . . . .. . . . . . . . ...... .. .. ... ... . .. .......... . . .. . . . . . .. .. .. ....................... .. ......... ...... . .......... . ........ .. . .. . .......... . .. . ...... . ....... . . . . . . ........... . . . ......... . . . . .. . .... . .... . . ...... . . . . .. .. ... . . . ... . .. . .. .. ..... ..... .. .. . .... . . .. . .. . . . . . . . . .. .. . .... . . . ....... .
lowQualScore : 6 6 6 444 00 3 6 6 6 6 66 6 6 00 6 6 00 00 66 0 1 1 1 22222 1 444 7 3 3 6 6 6 7777 9 6 6 00 6 1 1 1 66 3 66 7777 00 66 111111 6 3 6 00 6 7 3 444 0 0 6 0 0 8 8 33333333 7777 0 55 0 0 0 55 0 444444 44444444444444 4444 1 00 7777 5 6 3 55 6 00 555 4 3 66 11111 666666 3 888888 22 1 3 333333333 555 9999 66 6 3 6 88 111 99 99999999 000000000 00000 77777777777777777777777777777777777777777777777777777777777777777777777 4 22222222222222 11 9 4 888 000000000000000 1111 0 000000000 7 4 1 9 000000000000 0 6 4 11 8 9 4 4 4 4 4 222222 11 11 999 888 9 11 4444444444 0 5 99 0 7 3 3 7 99 33 22 44444444444444444444444 22 777777777 111111 7 3333333333 0 22222222 33 7 22 7 7777777777 7 22 7 333333 5 8888888 7 0 0 0 7 7 00000000000 7 0 0 222222222 7 7 7 7 00 7 0000 8 0000 0 8 000000 0 0 8 8 22 00 000 0 2 7 777 7 99 0 11 99 11111 11111 11 66 4 4444 4 3 99 0 99 0 4 6 8 7 7 7 7 99 99 7 7777 7 7 7 2222222 8
consensus : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-CATCAGCAC-----G--CCTAC--ATA-G--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGTGAGC--AC-CTGTTCACCAAAC-T-ACG-----A--CT--A-T-AGA---TCGGCCTACAGAATC---------------AGTCGGGTA-TATT-TTTTTTTT--------ACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAACGGA-TTCT--TTTCAAATGAA-A-TT-AAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCTTAAG-TACCGC--AC-GC-ACCCTATCCGCC--CAGGA-CGT--ATTGCTA---TAGT--------AC----AGTAACT--AC---------ATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACATAATGTATT-AAAGGTATGAAATATCAT-AAA-TATGT-TAGACTTTCTTT-T--ATGTGATA-----T---TGCAAAATAAGTAGATAT--TAC-ATGTAA--TTATAAACTCCATGTATAA---TA--AAGCACGGCTTTA-TAGCAT-AAACTTT-GAAAAGA-AA-TATA----GCC----ATCTGA-TTTTCATCTCTG-AGTACATT---AA--TTACACATGTTGC-AGTACGTAC-AGTCA-AATCACTGTAAATGCAATTATTTGT-TAT-GT----AGGTTTAATAAA----TGA-TTAAGCTTTGATTAATATGT------ATTTGA-CAG-ATAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGTCGTAT-TATTG---TATTGGGGA-TTTTAGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--TC-GCTCT--TTA-GTATAACATGCTCCAATTGTAAAAATGTTACCCAA-GT-ATCA-T-CA--GG--GAAA-AGGCATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAAGGGC-AAAGCATGCAC
Reference ( family-1351 ) : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTNA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--A------CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----T-A-A-GGT--AGATCA-TG--CTTA---TGCGAAA-AAAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-CATCAGCAC-----G--CCTAC--ATA-G--GGGCTCGTG-A-C-GAA-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAAGTGAGC--AC-CTGTTCACCAAAC-T-ACG-----A--CT--A-T-AGA---TCGGCCTACAGAATC---------------AGTCGGGTA-TATT-TTTTTTTT--------ACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAACGGA-TTCT--TTTCAAATGAA-A-TT-AAA-TGAGCGACATGCT-TGATTT--A--GACTATTCGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCTTAAG-TACCGC--AC-GC-ACCCTATCCGCC--CAGGA-CGT--ATTGCTA---TAGT--------AC----AGTAACT--AC---------ATTAATGACAGGCGAAG--TA--AAT-GAAAGTGAACGTGAAAATACATAATGTATT-AAAGGTATGAAATATCAT-AAA-TATGT-TAGACTTTCTTT-T--ATGTGATA-----T---TGCAAAATAAGTAGATAT--TAC-ATGCAA--TTATAAACTCCATGTATAA---TA--AAGCACGGCTTTA-TAGCAT-AAACTTT-GAAAAGA-AA-TATA----GCC----ATCTGA-TTTTCATCTCTG-AGTACATT---AA--T-ACACATGTTGC-AGTACGTAC-AGTCA-AATCACTGTAAATGCAATTATTTGTNTAT-GT----AGGTTTAATAAA----TGA-TTAAGCTTTGATTAATATGT------ATTTGA-CAG-ATAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGTCGTAT-TATTG---TATTGGGGA-TTTTAGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCATTTTTGGTTTGGGA--TC-GCTCT--TTA-GTATAACATGCTCCAATTGTAAAAATGTTACCCAA-GT-ATCA-T-CA--GG--GAAA-AGGCATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAAGGG--AAAGCATGCAC
gi|1 : AAGGGTCCTCCAG-T-GTCGTGGC--AT---T---TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGA---GATTTT--A-CT-----AA-AG--TGTCGT--AACT--CTAA-T-GTAAT-TTCG--A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GC--CT--C-TTCA-A-CA-T-AGAA--G-AT--AATA----A--G--A------CTC-ATAA-CCAT-GGTG--A-G-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-ACGAACG-GGCG-ATCTATAAGTGAAAAA--ACA-------AAA-----TAT-C--TAAA---AC-AATGA--GACT--AC-GATTGTTATTAGTT---TTA--------------CCCTT----ACTGCCC-ACG--AAGTTG----T-A-A-GGT--ATTTCA-TG--TTTA---TGCGAAAGAAAGACGTGGCACTT-----TA------CA-AG------CAATTG--A-TTTTT-CATCAAT-----------CTAC--ATC-G--GGGCTCGTG-A-C-GAC-TTG-G-CC--TTCTA-----TCTTCTAT---AT----TTA-----CATN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--GGACTGTTCACTAAAC-G-AC------A--GT--ACT-AGA---TCGGCCTACAGAATC---------------AGTCGGGTA--ATTATTTTTTTT--------ACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATGAAC-GA-CTAT--TTTCAAATGAA-A--T-AAA-TGAACGACATGCT-TGATTT--A--GATTATTTGT--GCA--TCTTT---A---TTA--TGAT----------TTTACAGTGTTCATAAG-TA-CAC--ACTGC-A-CCTATCCG-C--CAGGA-CGTAAATTGCTAGACTAGC--------ACAGTAAGTAACTAAAC---------ATTAATGACAGGCGAAG--TA--AAT-GGAAGTGAACGTGAAAATACAT-ATGTATT-AAAGGTATGAAATATCAT-AAA-TATGTGTAGACTTTCTTTATGAATACGAT------T---TGCAAAATAAGTAGATAT--TAT-GT---A--TT-TAAACTCCATGTATAATTCTA--AA-CAGGGCTTTA-TAGCAT-AAACTTT-GAAAAGA-AA-TATA-----CC----ATCTAA-TTTTCATCTCTG-AGTACATT----A--T-ACACATGTTGC-AGTACGTTC-AGCTC-AATCACTGTAAATGCAATTATTTTTTTAT-GTTCTAAGGTTT-GTAAA----TTA-TTAAGC-TTGATTAATATGT------ATTTGA-CAG-AT-ATTCTCAAAGCATAAACTGGAAATCGA---AG-G-CGTCGCAT-TATTGTAATATTGGGAA-TTTTAG-CGA--AAAG-TTTACAGA-GGATGCTCATCA--TATCATAAG--CCATGGT-TT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-GCA--TTTGGTTTGGGA--TC-GTCTT--TTA-GTATAGCATGCTCCAATTGTAAAAATGTTACCCAA-GT-ATCA-T-CA--GG--GAAAGAGG-----CAGTA-CT-ATGG-ACAG-GAG-ATCAATTA-------AAAGCATGCAC
gi|10 : AAGGGTCCTCCAG-T-GTCGTGGCT-AT---TC--TTG-AGTAA-TTCT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TATTGT--AACT--CTAA-T-GTAAT-TTCGC-----AG-A---Gg
gi|10 : ATTG--T---TTA--------------CCCTT----GCTG-CCCACG--AAGTTG----T-ACA-GGT--AGATCA-TG--CTTA---TGCG-AA-AAAGA--AGGCACCTATAGGTA------CA-AA------CAATTG--A-TTTTT-CATCAGCA---------CCT----ATA-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NNNN--------NTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGG-------AC-CTGTTCACCAAAC-T-ACGACAGTA--CT--A-T-TGA---TCGGCCTACAGAATC---------------AGTTGGGTA--ATT-nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattgtttacccttgctgcccacgaagttgtacaggtagatcatgcttatgcgaaaaagaaggcacctataggtacaaacaattgatttttcatcagcacctatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggacctgttcaccaaactacgacagtactattgatcggcctacagaatcagttgggtaatt
gi|11 : aagggtcctccagtgtcgtggctattcttgagtaattctatctcgagacaaagaagattttcacttcaaagtattgtaactctaatgtaatttcgcagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATGACAGGCGAAG--TA--AAT-GAAAGTAAACGTGAAAATA--TAAT---------------AAAT----------TATGT-TAGACTTTCTTT-T--ATGTAATA-----T----ACAAAATAAGTAGATAT--TAT-ATGTAA--TTATAAACTCCATGTATAA---TACTAAGCACAGCTTTA-TAGCAT-AAACTTT-GAAAAGA-AA-TATA----GCC----ATCTGA-TTTTCATCTCTG-AGTACATT-------T-ACACATGTTGC-AGTACGTAC-AGTCA------C-----ATGCAATTATTTGT--AT-GT----ATGTTTAATAAACAATTAA-TTAAGCCTTGATTAATATGT------ATTTGA-CAG-ATAATTCTCGAAGCATAAACTGGAAA--GA---AG-GCCGCCGTAT-TATTG---TATTGGGGA-GTTTAGCCGA--ACAGCTCTACAGAAGGATTCTCATCAGATATCATTAAGCCCATTGCTTT-----TGAT-----AA--A-----------------------CATTT--GGTTTGGAT--CC-GCTCT--TTAGGTATAGCA-G-TCCAATT-TGAAAA--TTACCCAAGGT-ATCA-T-CA--GAGCGAAA-AG-----CTAGTACAT-ATTGCACAGCGAG-A
gi|13 : AAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-ATAAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-CT--TCAAA-AG--TGTCGT--AACT--CTAT-T-GTAAT-TTTGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CTCCC-TTCATA-CA-T-AGAA--GCAT--AATA----A--A--AG-----CTC-ATAACCCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAC-GCGAACG-GGCGAATCT-TAAGTG-AAAACAAC--------AAA----AGATCC--TACACGCACAAATGACAGACTTAACGGATTGTTATTG--T---TTA--------------CCCTT----ATTG-CCCACG---AGTTGTAATT-A-A-GGT--CATTCA-TGGTTTTAT--TGCGAAA-AAAGA--TGGCACCT----TTA------CA-AG------CAATTG--ATTTTTT-CATC-GCA------GTCCCTAC--ATATG--GGGCTCGTG-A-C-GACTTTG-GCCC--TTCTA-----TCTTTCAT---A
gi|14 : tG------TAATTG--A-TTTTTTCATCAGCAC-----GG-CCTAT--ATA-TACGGGATCGTG-AGC-GAA-TTT-G-AC--GTCGACCGTTTCTTCTAT---ATAAATTTA-----CATT--------ATTAGAATAGGGGGACGTGTAAAAGCAAAAAAAAAAAACACCTTGGAGCCGGTAA-----------CTGTTCACCAAAT-TCACG-----AACCTTCA-TTAGA---T-GGCCTACAGAATCCCCGGGACAGGAATCAGTCGGGTA-TTTT-TTTTTTTTTTTTTTTTATACTGGCA-TAAGT-A-ATAA-GCAA--------AA--T-A--TGAACG-A-TTCT--TTTCAA-TGAACA-TTTAAA-TGAGCGACATGCTGTGATTA--AGTGACTATTTGTGGGCA--TCTGT---ACAGTGACGTGATCTGTATTACGTTTACAGTGTTTCTAAGCTA--GT--AC-GC-A-------CGGCAACAGG--CGT--ATTGCT----CAGG--------AC----AGaattt
gi|15 : ATA-CA-T-AGAA--G-AT--AATA----A--A--AGA----CTC-ATAAATCAT-GGTG--AAG-ATAAAAAAAAAGCGT---GACTGAGAAAT-CCCGAGAT-AAGAACG-GGCA-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--TT-GATTGTTATTG--T---TTA--------------CCCCT----ACTGCCCCACG--AAGTAG----TAA-A-GGT--GGATCA-TG--CTTA---TGCG-AA-ATAGA--TGGCACCT----CTA------CA-AG------CAATTG--A-TTTTT-TATCAGCATCG---G--CCTAT--NNN-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NTTN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGC--AC-CTGTTCACCAAA
gi|16 : G-AGTAA-TTTT-A-TCTC-GAGATAAAGAA--GATTTTC-A-CT--TC-AA-AG--TGTTGT--AACT--CTAA-T-GCAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-AT--C-TTCATA-CA-T-AGAG--G-AT--AATA----ACAAT-A------CTC-ATAACCCAT-GGTG--AAG-ATAAACAAAA-GCGT---GAATGAGAAAT-CCCGAGAT-ACGAACG-GGCG-ATCTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-AGCT--AC-GATTGTTATTG--T---TTA--------------CCCTT----ACTG-CCCAAG--AAGTTG----TAA-A-GGT--TCTTCA-TG--CTAA---TGC-AAA-AAAGA--TGACACCT----TTA------CA-AG------CAATTG--A-
gi|2 : AA----AG-T-C--TAAAC--AC-AATGAC-GGCT--AC-GATTGTT-------------------------------T----A-TGCCCCACGCTAAGTTG----T-A-AAGGTTAAGATCA-AG--CTTAA--TGCGAAA-AA-GA--TGGCACCT----CTA------CA-AG------CAATTGCGA-TTTTT-CATCAGCACCACCGG--CCTAT--ATA-G--GGGCTCATG-AAC-GAA-TTG-AACC--GTCTA-----T--TCTGT----T----TTA-----CATT--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGC--AC-TTGTTCATTAAACAT-G-G-----A--CT--ACT-AGGCCTTCGGCCTACAGAATC---------------AGTCGGGTA-T--T-TTATTTTT---------CACCTGTACTAA-TTACATAAAGCAA--------AAATT-AAATGAACGGA-TTCT--TTTCAA-TGAA-A-TT-AAACTGAG-----------------------------GT--GCA--TCTTTGT-A---TTA--TGAT----------TGTA-AGT-TGCTTAAG-TACCGGTGAC-GCCACCCCATCTGCC--CAGGATCGT--ATTGCTA-----GC---------C----AGTA-CT--AC---------ATTAATGACAGGCGAAG--TA--AATCGAAAGTGAACGTG-AAATACATA--------------ATAAAATATCAT-AAATTATGC-TAGACTTT-TTT-T--ATGTGATA-----TGCCTGGTGAATAAGTAGTGGT--TAC-AT-TAA--TTATAAACTCACTG-ATAA---T----AGCATGGCTTTATTAG-AT-AAACTTGAGAAAAAAGAA-TATA----GCCATGGATCTGA-TTTTCATCTCCACAGTA-ATT---AACTT-ACACATGTTGCAAGTACGTACAAATCATAATCACTGTAAATGCAATTATTTGTGGGTGGT----AGGTTTAATAAA----TGATTTCAGTTTTGATTAATATGT------ATTTGA-CAGAATAATTCCTGAAGC-TAAACTGAAAA--GATCGAGTGCCGTCGTAT-TATTG---TATTGGGGATTTTTAGCCG---ACAGCATTACAGA-GAATGC-CATCA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATACGAATTTTTGGTTTGGGAGTCC-GCTCTTCTTA-GTAT-ACATGC-CGAATTGTAAAGAAGTTACCCAA-TT-ATCA-TGCA---G--GAAA-AGGTATTCCAGTACCTGATGGCACAG-GAGAACAAATTAAAGGGGAAAAGCA-GCAC
gi|21 : TAC-AT----GAATA-ACATTTTGAGTT-GGGG--TC-GCTCT--TTA-GTATAACATGGTCCAATTGTAAAAATGTTACCCAA-GTAATCA-T-CA--GG--T--A-AGGCATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAAGGGC-AAAGCATGCACatgtaaaaagattagttcaactgttttaagattctaccaaggggaggtaataatttgcagttaatattatgtaaattt
gi|22 : ATTCGT--GCA--TCTTA---A---TTA--TG-T----------TTTACAGTGTTCTAAAT-TACCGC--AC-GC-ACCCTATCCGCC--CAGGG-CGT--ATTGCCA-----GT--------AC----AGTAACT--AC---------AGTAATGACAGGTGAAG--TA--AAT-GAAAGTGCACGTGAAAATACATACTGTATT-GAAGGTATCAAATATAAT-----TATGT-TTGACTTTCTTT-T--ATGTGATA-----T---TACAAAATAAGT--AT----------------TTATAAACTCCATGTATTA---TA--AAGCtgtccatttttaagacacttgcaagggaggtaattaaatttgcaggtaatattatgttgggtttttttttttgcccattcttcaaaaattcaccagaaaaaaattaaattctaa
gi|23 : AGGGTCCTCCAG-T-GTTGTGGCC-AC---TC--TTG-AGTAA-TTTT-A-TCTT-GAGACA---AA--GATTTTC-A-CC--TC-CA-AG--TATTGT--AACTG-CTT--T-TTAAT-TTCGA-G---AG-C---GTG-A-A-TG
gi|23 : ttgtCGAGA-GCGT---GAATGGGAAAT-CCCGAGAT-AAGAAAG-GGCG-ATTTATAAGTGAAAAACAACA-------AAA----AGAT-C--TAAAC-CAC-AATGAC-GGCT--GC-GATTGTTATTG--T---TTA--------------CACTT----ACCGCCCCACG--AAGTTG----T-A-A-AGggaaatcccgagataagaaagggcgatttataagtgaaaaacaacaaaaagatctaaaccacaatgacggctgcgattgttattgtttacacttaccgccccacgaagttgtaaagc
gi|24 : ttgtagggtcctccagtgttgtggccactcttgagtaattttatcttgagacaaagattttcacctccaagtattgtaactgctttttaatttGGTCCTCCAGTT-GTCGT-GCC-A----TCGGTTGTAGTAAGTTTTAA-TCTCGGAGACAAAGAATTGATTTTCGA-GTTATC-AAGAG--TGTTGTTGTACTGCCTCA-T-ATAATGTTCGC-ATATAGTA---TTT-A-AGTGTGAC-TT-ACATTGCAT-GCT-CT--C--TCATAGCATT-AGAA--G-ATAAAACA----A--A--AATTGATCTC-AT-AACCAT-GGTGTCAAGTATAAAC-AAA-GCGTTGGGGATGAc
gi|25 : ta--TTCTA-----T--TCTAT---AT----TTA-----CATN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG----C--AC-CTGTTCACCAAAC-C-ACG-----A--CT--A-T-AGA---TCGGCCTACAGAATC---------------AGTTGGGTG--ATT-TTTTTTTT--------GCACCTGTATTAAATCACATCA-GCAA--------A-----AAAT-AACGGA-TTA---TTTCAATTAAA-A-TT-AAA-T-AGCGAAATGCT-TGATT
gi|28 : ccgAAGGGTCCTCCAG-T-GTCGGTGCC-AT---C----TG-AGTAA-TTTT-AATCTC-GAGACAAAGAAT-GATTTTC-AGTT--TC-AA-AAGTTGTTGT--AACT--CTCAAT-ATAAT-TTCGCTA---AG-ATTTGTTTA-A-TGTG-A-TT-A----GCATTGCAGCT--C-TCCATA-CA-TTAGAA--G-AT--AAAACAAAA--A--A------CTC-ATAA-CCA--GGTG--AAG-ATAAACAAAA-GCGT---GA
gi|29 : tACGTGAAAATACATAA-GTATTAAAAGGTATGAAATATCATGAAA-TATGT-TAGACTTTCTTT-T--ATG-AATACGGATT---TGCAAAATAAGTAGATAT--TACTATGTAACTTTTTAAACTCCATGTATAA---TA--AA-CACGGCTTTA-TAGCATAAAACTTT-GAAAAAA-AG-T-TATCCCGGC----ATCTAATTTTTCATCT
gi|3 : ---TAGT--------AC----AGTAACT--AC---------ATTTATG-----CGAAGGTTACCAAT-GAAAGTGGACGTGAACATACATTATGTATT-AAAGGTATGAAATAT--------TATG------CTTTCTTT-T--ATGTGATA-----T----ACAAAATAAGTAGATATATTAC-ATGCAA--TTATAAACTCCATGTATAAA--TACTAAGCACAGCTTCA-TAGCAT-AAACTTT-GAAAAGA-AAATATA----GT-----ATCTGA-TTTTCATCTCTG-AGTAAATT---AA--TTACACATGTTGC-AGTACTTA---GTCA-AATCACTGTAAATGCAATTATTTGT--AT-GT----AGGTTTAATAAAA---TGA-TTAAGCTTTGATTAATATGT------ATTTGAACAG-ATAAT------------AACTGGAAA--GA---AA-GTCGTCGTATATATTG---TATTGGGGA-TCTTAGCCGA--ACAGCTCTACAGA-GGATGCTCATCA--TGTCACCAG--CCATTACATT-----TGAT-----TA--ATTG-TGTAG-AT----GAATA-ACA-TTTTGGTTTGGGG--TC-GCTC---TTA-GAATAACATGGTCCAATTGTAAAAATGTTACCTAA-GT-ATCA-T-CA--GG--GAAA-AGGCATTCCAGTACCT-ATGGCACAG-GAG-ACCAATTAAAGGGC-AAAGCATGCAC
gi|32 : tgcACAGTATC---------------AGTCGGGTAATATT-TTGTTTTT--------GCACCTGTACTAAA-----------------------------ATGAACAGA-TCCT--TTTTAAATCAA-T-TT-AAA-TAAGTGCCATGCT-TGATTA--A--GACTATTCGT--ACA--TTTTT---A---TGA--GGAT----------TTTACAGTGTTCTTATG-TACTGC--AC-Gatgtaaccatttttaagattctgcaaaggggggtaattaaatttgcaggtaatattatgttggttttttccctcattcttcaaaattcaccagcaaaaaaaaataaattcta
gi|33 : caAAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-AGTAA-TTTT-A-TCTC-GAGACAAAGAA--GATTTTC-A-GT--TC-AA-AG--TGTTGT--AACT--CTCA-T-ATAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GCAT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--
gi|35 : tATA-CA-T-ATAAATG-AT--AAAA----G--A--A------CTCCATAAATCATAGGTA--AAG-ATAAACAGAA-CCGTTT-GATTGAGAAATCCCCGATAT-AAGAAC--GGCG-ATCTATAAGAGAAAAACAACA-------AAA----AG
gi|36 : CGTTGCATT-----TGAT------A--ATT--TGTGGTAT----AATCA-GCATTTTGGGTTTGGGA--TTTGTTCT--T-A-G-ACAACAT--CCCAATGGTAAAAAAATTACCCAA-G--ATCATT-CAGTGG--GAAA-AGGCAT
gi|37 : tGATGCTCATCA--TATCATCAG--CCATTGCATTGCATTTGAT-----TATAATTG-TGTAG-ATCTATGAATA-GCATTTTTGGTTTGGGA--CC-GCTCT--TTA-GTACAACATGCTCCAATTGTAAA
gi|4 : AAGGGTCCTCCAG-T-GTAGTGGCC-AT---TC--TTG-AGTAA-TTAT-A-TCTC-GAGACAAAGGA--GATTTTC-A-CT--TT-CA-AG--TATTGT--AACT--CCTA-T-GTAAT-TTGGC-A---AG-A---GTT-A-A-TGTT-CTTT-C----ATAT-GCA-CT--C-TTCATA-CA-T--GAA--G-AT--ATTA----A--AAGA------CTC-ATCAACCAT-GGTG--AAG-ATAAACGAAA-GCCT---GAATGAGAAAT-ACCGAGAT-AAGAAAG-GGCG-ATCTAAAAGTGAAAA--AACAGAGCTCTAAA----AGAT-CTATAAAC-CAC-AATGAC-GGCT--GC-GATTGTTATTG--T---TTA--------------CCCTT----ACTGCCCCACG--AAGTTG----TAA-A-GGT--AGATCA-TG--CTTA---TGCG-AA-AAAGA--TGACACCT----CTA------CA-AG------TGATTG--A-TTTTT-CATCAGCA---------CCTACATATA-G--GAGCTTATC-A-C-GAA-TTG-G-CCCTTTCT
gi|4 : tTCACCAAAC-T-ACG-----A--CT--A-T-AGA---TCGGCCTACAAAATC---------------ACTCGGATAATATT-TTTTTTTT--------ACACCTGTACTAAATCACATAA-GCAA--------T--TT-AAATGAACGGA-TTCT--TTTCAAATGAA-A-TT-AAA-TAAGCAACATGCT-TGATTT--A--GACTATTCGT--GTA--CCTTT---A---TAA--TGAT----------TTTACAGTGTTCTTCAG-TACCGC--AC-GT-ACCAAATCCGCC--CAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaccaaactacgactatagatcggcctacaaaatcactcggataatattttttttttacacctgtactaaatcacataagcaatttaaatgaacggattcttttcaaatgaaattaaataagcaacatgcttgatttagactattcgtgtacctttataatgattttacagtgttcttcagtaccgcacgtaccaaatccgccca
gi|40 : taagggtcctccagtgtagtggccattcttgagtaattatatctcgagacaaaggagattttcactttcaagtattgtaactcctatgtaatttggcaagagttaatgttctttcatatgcactcttcatacatgaagatattaaaagactcatcaaccatggtgaagataaacgaaagcctgaatgagaaataccgagataagaaagggcgatctaaaagtgaaaaaacagagctctaaaagatctataaaccacaatgacggctgcgattgttattgtttacccttactgccccacgaagttgtaaaggtagatcatgcttatgcgaaaaagatgacacctctacaagtgattgatttttcatcagcacctacatataggagcttatcacgaattggccctttctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnT-AAATGAACGGA-TTCT--TTTCAAATAAA-AATT-TAA-TGAGCAACATACT-TGATTT--A--GACTATTCGT--GCA--TTCTTATGA---TTA--TGAT----------TTTACAGTGTTCTTAAG-TACC
gi|42 : C-GC-ACCCTATCCGCC--CAGGA-CGT--ATTGCTA---TAGTACACTGTAAC----AGTAACT--AC---------ATCAATGACAGGCGAGG------AAT-GAAAGTGAACGTAAAAATACATAATGT
gi|43 : A-AA-TATA----CCC----ATCTGA-TTTTCATCTCTG-ATTACATTTAAAA--TTACACATGTTGC-AGTACGTTC-AGTCC-AGTCACTGTAAATGCAATTATTT-TTTAT-
gi|44 : -TG--CTTAATATGCG-AA-AAAGA--TGGAACAT----CTA------TGTAG------CAATTG--A-TTTTT-CACCAGCA---------CCTAC--GTA--------T--TG-A-C-----------CC--TTCTA-------TTCTAT---AT----TTA-----CAT
gi|46 : TAT-GATTG---TATTGGGGA-TTTTAGCCGA--ACAGCTCCACATA-GGATGTTCATTA--TGTCATCAG--CCATTGCATT-----TGAT-----TA--ATTG-
gi|48 : tAGCCGA--ACAGCTCTACATA-GGATGCTCATCA--TGTCATTAG--CCATTGCAAT-----TCAT-----TA--ATTG-TGTAG-AT----GATTA-GCATTTT
gi|5 : TGA-C-GTAAT-TT-G--A---AA-A---GTT-ACA-TTAT-T-TT-A-----CAT-----CT--CGTTC-------T-A-------AT--AAAA----A--A--A------CTC-ATAAACCAT------------------AAA-GCGT---GAATGAGAAAT-CCCGAGAT-AAGAACG-GGCG-ATCAATAAGTGAAAAACAATA-------AAA----A------------------ATGAC-GGCT--AC-GATTGTTATTG--T---TTACCCCCGGGTGTTTACCCTTTAATACTGTCCCACG--AAGTTG----T-A-AAGGA--AGATCA-TG--CTTG---TGCGAAA-AAAGA--TGGCACCT----CTATAGCTACA-AG------CAATTG--A-TTTTT-CATCAGCACCG---G--CCTAT--A-A-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NNTT--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGC--AC-CTGTTCACCAAAC-T-ACG-----G--CT--A-T-AGA---TCGGACCACAGAATC---------------AGTCAGGTAATATT-TTTTTTTTT-------ACACCTGTACTAAATTACATAA-GCAA--------AAATT-AAATAAACAAAATTCT--TTTCAAATGAA-A-TT-GAA-TGAGCGACAAGCT-TGATTT--A--GACTATTCAT--GCA--TCTTT---A---TTA--AGAT----------TTTACAGTGTTCTTAAG-TACCGC--AC-GC-ACCCTATCCGCC--CAGGA-CGT--ATTGC-----TAGT--------AC----AGTAACT--ACATTAATCAAATTAATGACAGGCGAAG--TA--AAT-GGAAATG
gi|53 : A---TGCGAAA-AA-GA--TGGCACCT----ATA------CA-AGTAAAAGCAATTG--A-TTTTT-CATCAGCAC-----
gi|55 : -ATCA-T-CA--GG--GAAA-AGGCA-----GTACCT-ATGACAAAG-GAG-ATCAATTA-------AAAGCATGCcta
gi|57 : -T-GTAGT-TTCGC-A---AG-A---GTT-A-A-TGGT-T-TTAA----GTAT-GCA-CT--C-TTC-TA-CA-T-AGA
gi|58 : GGA-TTTTAGCCGAGAACAGCTCTACAGA-GGATGCTCATCA--TGTg
gi|59 : AGGGTCCTCCAG-T-GTCGTGGCCGATATGTC--TTG-AGT
gi|6 : tAAGGGTCCTCCAG-T-GTCGTGGCC-AT---TC--TTG-GGTAA-TTTT-A-TCTC-AAGACAAAGAA--GATTTTC-A-CT--TC-AA-AG--TAATGT--AACT--CCTA-T-GTAAT-TTCGC-A---AG-A---GTT-A-A-TGTT-C-TT-A----GTAT-GCA-CT--C-CTCACA-GA-C-AGAA--G-AT--AATA----A--A--AGG----CTC-ATAAACCAT-GGTG--AAG-ATAAACAAAA-GTTT---G-ATGAGAAAT--CCGA-ATAAAGAACGCGACG-ATCTATAAGTG-AAAACAAC--------AAA----AGAT-C--AAAAC-CA--AATGA---GC---AC-A--TGTTATTG-------TA--------------CCCTTA---ACTGCATCACG--AAGTTG----T-A-A-GGT--ATATCATTG--C-TA---TGGGAAA-AAAGA--TGGCACCT----CTA------CA-AA------CAATTG--A-TGTTT-CATCAGCACCG---G--CCTAT--ATA-A--GG--TCGTGAA-CAGAA-TTGTA-CCT-TTCTA-----TCCCAAATAAAAT----TTACCCCCCATTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGAATCAAC-CTTTCCACCAAAC--------------CT--A-C-------TCG--CTATAGAA-C---------------AGTC-GGTA---------------------------GGTA-TAAATTAAATAACGCAA--------AAATTGAAAT--ACGGA-TTCTTCTTCCAAAT-AA-A-TT-AAA--GA-CAATATGCT-TGATTTTCA--GACTACATGT--ACAATTCCTG---A---TCA--TGAT----------T
gi|7 : ttTT---AA--TTACACATGTTGC-AGTACGTAC-AGTCA-AATCATTGTAAATGTAACT-----TGTAT-TT----AGATTTAATAAA----TGA-TTATGCTTTGATTAATATGTACATGTATTTGA-CAG-ATAATTATCGAAGCAGAAACTGGAAA--GA---AG-GACGTCGTAT-TATTG---TATTGGGGA-TTTTAGCCGA--ACAGCTCTACAGA-GGATACTCATCA--TGTCATCTG--CCATTGCATT-----TGATATTAGTA--ATTATTGTAG-AT----GAATA-GCA-TTTTAGATTGGGA--TC-GCTCT--TTA-GTATACCATGCTCCAAaacacatttgcagt
gi|8 : TCCTCTAG-TTGTCGTGGCC-AT---TC--TTG-AGTAA-TTT--A-TCTC-GAGACAAAGA-----TTTTC-A-CT--TC-AA-AG--TATTGT--AATC--ACTA-TAGTAAT-TTCGC-----AG-A---GTTAA-A-TGTT-C-TT-A----G-AT-GCA-CT--C-TTCATA-CA-T-AGAA--G-AT--AATA----A--A--AAG----CTC-ATAAACCAT-GGTG--AAG-AT-AAC-AAA-GAGT---GAATGAGACAT-CCCGATAT----AACG-GGCG-ATCT-TAAGTGAAAAGCAACG-------AAACCAGAGGC-T--TAAAC-CAC-AATGAC-AGCT--AC-GATTGTTATTG--CTAATTA--------------CTCTT----ACTGCCCCACG--AAGTTG----TAA-A-GGC--AGATCA-TG--CTTA---TGCG-AA-AAAGA--TGGCACCT----CTA------C--AG------CAATTG--A-TTTTT-CACCAGTA---------CCTAN--NNN-N--NNNNNNNNN-N-N-NNN-NNN-N-NN--NNNNN-----NNNNNNNN---NN----NNN-----NTTN--------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGC--AC-CTGTTCACCAAAC-T-ACG-----A--CT--A-C-AGA---TCGGCCTGCAGGATC---------------AGTCGGGTA--A-T-TTTTTTTT--------ACACCTGTAATGAATTACATAA-TCAATGACAGGCGAAGT-AAATGAAccatttaagggggaaagcatgtacatgcaaaaagattagtccagctgtttttaacctttttttagattctggaaatagagataattaattttgcagctaatattatgtaaatttcattttccctcattcttcaaaattcaccagcaaaaattaaattctaattgatatattttatacatatactaattactattacatgtacatgtatgttaaaatttgaaacaaaattttgtagttattattttgtttttcatttttgtaatatatatgcattgcattttttttatatatgtctgatatgttttatatttatttt
22 sequences could not be aligned to this reference sequence:
Unaligned ( gi|9 ): ATGCATGTAAAAAGAATTAGGTTCTGTTTGTAACCATGTTTTAGATTCTGCAAAGGGAGGTAATTATTTTTGCAGCTAATATTTATGTAATTTTATTTTTCCCCATTCTTCAAATTCACAGCAAAAAATTAAATTCTAATGTGATATATTTCATACATTCTATTACTATTGATGTTAAAATTTGAACAAAATTTGTGGTATATTATTTTTTTTTTTATTTTCATTTTTGTTATAATATATGATATCGCATTTTTTTTTAAATATTCTAATTTTTTATTTAAGTTTTATTTGGTTATTGATGGGTTTTTATATTTGATATATCATTAATTATTGTATTTCTAGCCATTTCTTTGTTTTTTTGTATTTAAATTGTTTTGTTTGTTTCATGCAACATTAATGTGCAATGACATTAGAAGTAATAAATCATAAAATATATGCTAATTTTGTTATTGTCTTTGATGTTAAATTATGTTATATGGTATATTCAACAGCCTGCTGTTGTTTATGATTTTGGGACTTAAAACTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|12 ): TTTTTTTCCCCATCCTTCAAGATTCAACAGCAAAAAAAATAATAAATTCTAATTGATATATTTATAAATATACTGATTACCATTATGTTCAAATTTGAAAAAAATCTTGTGGTTATTATTTTTTTAATTTTCATTTTTGTTATATATATGAATTGCATTTTTAAAAAATATTCTGATAATTTTTATATTTATGTTTTGCTATTTGGTTTTGATGGGTTTTTTATTTGATATATTATTGTTGTTATGTATTTTGCCTATTTCTTTATTTGTTTTGTATCTAAATTGTTTTTGTTATGTGTTCATGCAACATATGTGCAATAACATTACAAGTAATAAATCATAAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTATATGATTATGCCAAGTAACCATGCTAGTTTTATGAATTTTGGAAAAACAATTGGTTGACC
Unaligned ( gi|17 ): TTCTAATTGATATATTTATACATATATACTGATTACCTTTATATTTAAATTTGAACAAAAATTGGTCATTAATTTTTTTTAATTTTTGTTATTATATATTGAATTGCATTTTTAAAAAAAATGTTCTCATATTTTTGATATTTTATGTTTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCGACATGTATTTATTTTTTATTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATTATGTGCAATAACATTAGAAGTAATAAATCATAAAAAAATATGGCTAATTTGTT
Unaligned ( gi|18 ): TTAATTTTGATGGTTTTTTTTTTAAATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTTGGATTGTATTTAAATTTTATTGTTATGTGTTCATGTAACATTATGTGCAATAAATTAGAAATAAAATAAATAATAGAAAATATGGCTAATTTTGTTATTGTCTTTGGTGTTTAATTATGTATATATTATCCAAGTAACCATCTGGTTTTATTGTTGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTTAA
Unaligned ( gi|19 ): TAATTTTGATGTTTTATTTTTTTAACATTTGATATATTATTATTGTTATGTACTTTGCCTTTTTTGTTGGATTGTATTTAAATTTTATTGTTATGTTTCACTAGTAACATTAGGTGCAAGTCAACAATTAAAATAAAATAAATAATAAAAATGCTAATATTGTTATTGTCTTTGGTGTTGAAATTATGTATCATGATTACAAGTACATCGCTGTTTATAATTGGAGGGGGGGGCTTAGGATGACCCTTCACCTCCTTA
Unaligned ( gi|20 ): ACATATACATATTATGTTAAAATTAAAAAAAATGTATTGTTGTTATTATGCTTTTTATTTTCATTTTTGTTATAAATATAAATTGCATTTTTTTAATATTCTATTTTTTATATTTAAATTTTGTTATTTAGTTTTGATGGGTTTTTTTTATTTGATATATTATCATTGCTATGTATTTTGTCTATTTCTTTCTTTGTTTTGTATCTAAATTGTTTTTGTTGTGTGTTCATGTCTCATTGTGGGCAATAACATT
Unaligned ( gi|26 ): CTGATTACTATTAAGTGAAAATAAGAACAGAATATTGTGGTTATTATTATAATTTTTTTTTTCATTTTTGTAATATATATGAATTGCATTTTCTTTTCCTTTTTATATTCCTATAGTTTTGATTTTTTTTTATTTGGTTTAATGGGTTTTTTTTTTATTGATATATTATTTTTGTTAAGTATTTTGCCTATTTCTTTGTTTGTTTTGTA
Unaligned ( gi|27 ): TTGTTATTGATTTTGGTCGGTTTTTGTTATTTGATATATTATCATGTTATGTATTTTGCCTATTTCTTTTTCTTTTGTTTTGTATTTAAATTGTTTTGTTATGTGTTCATCTAATATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAACTGTGTTACTGTCTTTGACGTTAAAACTATGTATATG
Unaligned ( gi|30 ): ATTTCTTTATTTGTTTTGTATGTGTTCATACAACATTATGTGCAATAACATTAAAAGTAATAAATCATAAAAATATGGCTAATTTAGTTGTTGTCTTTGATGTTAAAATTATGTAAAGGTAGAAGCCAAGTAACTATGCTAGTTTTATGAATTTTGAAGAAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|31 ): TTAGCTCAGCTGTTTGTAAGAATTTTTGTTTAGATTCTGCTAAGGGAGGTAATTAATTTTGCAGCTATGATTATGTAAATTTCATTTCTTCCCCATTCTTCAAAATTCACCAGCAAAAGAAAATTTAAATTCTAATTGATATATTATATAT
Unaligned ( gi|34 ): TTTTTTATTTGGTTTTCATGGGTTTTTATTATTGTTATGTATTTTGTCTACATGTATTTATTATTTGTTTGCTTTGTATTTAAATTTGTTTTTGTTATGTGTTCATGTAACATNNNT
Unaligned ( gi|38 ): TTTGCCTATTTCTTTGTTTGTTTTGTATTAAAATGGTTTTTGTTATGTGTTTATGTAGCATTATGTGCAATAACATTAGACGTAAAATATGGCTAATTTTGTTATTGTCTTT
Unaligned ( gi|39 ): ATGTGCAATAACATTAGAAAGTGTTACTGTCTTTGATGTTAAAATTATGTATATAATTATATCAAATTTATGAATTTTGGAGAGAAAAACTTGATGACCCTCCAGCATTCTT
Unaligned ( gi|41 ): ATTGTGTTACTGTCTTTGATGTTGAAATTATGTATATGGTTATGCCAAGTGACCATGCTAGTTTTATGAATTTTGGAAAAATAATTGGATGACCCTCCAGCCTC
Unaligned ( gi|45 ): CGTGTAACAAAGATAATGTTCAGCTGTTTTACTGCTTTTAGATTCTCCAATAGGAGAAATTAATTTGCAGCTAATAATTAGTAAATTTTT
Unaligned ( gi|47 ): GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Unaligned ( gi|49 ): AACCATGCTAGTTTTATGCTTTTTTCGAGGGGAGGGGGGGGGGGGGGGCGACCCTCCTGCCTCCTT
Unaligned ( gi|50 ): GTAACCATGCTGGTTTTATGAATTTGGGAGGGGGGGGGGGCTTGGATGACCCTCCAGCCTCCTT
Unaligned ( gi|51 ): GTAACCATGCTAGTTTTATAAATTTTTTTGGGGGGGGGGGAAATGGATGACCATCCGGCCTCCT
Unaligned ( gi|52 ): CAAGTAACCATGCTAGTTTTATGAATGGGGGGGGGGGGATGGATGACCCTCCAGCCTCC
Unaligned ( gi|54 ): TAATCATGCTAGTTTTATGAATTTTGGATAAAAATTTGGATGACCCTCCAGCCTCC
Unaligned ( gi|56 ): GCTAGTTTTATGAATTTTGGGGGAAAACTTAGATGACCCTCCAGCCTCCTTA