lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                      11111111111111111111111111111                                                                                                                                                                                                 111111111111111111111                                                                                                                                                                                                                                                                                                                   1111111111111111111111111111111111111111111111111111111111111                                                    111111111111111111111111                                                                                                                                                    333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333                                    1111111111111                                                                                              
lowQualScore                  :                                             222      2         1111            3333333      1111                                             1111111            22222                          11     3333333333333                222               1     2222222222                    222       111   1        22          1     44444444444444     11     3       222  1    33333     44444444  1     2   33   111111           1         2222    1              33333333333333333333333333333            11      3              222            333333333      1     1111111111  1   444444444444444444444444444444444444444   111      1      1     1   11   111    444444  1         222     111111111111111111111     1               222 1     222                  55555555555555555555555555555555555555555           88888888888888                  1   33333333333      33          1      444444     1    1    11      222222    111   1    111        22    1            3333333   11       11            22         4      7777777777777777777777777777777777777777777777777777777777777   11       1  222        2222     1  2             333333333333333333333333            2   22        77777      2     1    6666666        1     4444444                       22       44444444444444    2   333         2     000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000      3333        333      33       0000000000000   1       1         2      22222     1  33                     6666        99999    22       
lowQualScore                  :                                 6       4   777  4   2  555    0000 33 555  33 6666666  5   1111     2 2     2 777  33    5555  2 2  666     5555555   6      2 11111  3    3 1  6666   3 3 3  33     9999999999999  66   4 8  1   000   5   5   2   0 5   1111111111 4  5   77    1  6  777 8   6 777 2 0  999   33          0     00000000000000     22     1  2    777  0    88888     55555555  0     0   33   444444     8     0  0   0  8888    6   0          77777777777777777777777777777     8   8  99      3       0  6   777            999999999      6     8888888888  5   000000000000000000000000000000000000000   777      0      0     9 3 22   666    777777  0 4       555     999999999999999999999     0         3 2   111 0     777        44 7      55555555555555555555555555555555555555555  0   6    33333333333333   7  6     6     3   00000000000      88       1  0      888888  8  3    3    88      555555    777   0    777        77    5  8    8    0000000   00 3   8 44       1    11   2     0      4444444444444444444444444444444444444444444444444444444444444   88       5  555      2 0000     5  0   3      2  000000000000000000000000            0   77   6    77777      0     5    1111111        5  2  5555555           0   7       11 7     77777777777777    0   000 4       0     222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222   6  9999     2  555      55       0000000000000   5       5       2 0      88888     0  55              2      0000        22222    11 6     
lowQualScore                  :                                 .       .   ...  .   .  ...    .... .. ...  .. .......  .   ....     . .     . ...  ..    ....  . .  ...     .......   .      . .....  .    . .  ....   . . .  ..     .............  ..   . .  .   ...   .   .   .   . .   .......... .  .   ..    .  .  ... .   . ... . .  ...   ..          .     ..............     ..     .  .    ...  .    .....     ........  .     .   ..   ......     .     .  .   .  ....    .   .          .............................     .   .  ..      .       .  .   ...            .........      .     ..........  .   .......................................   ...      .      .     . . ..   ...    ......  . .       ...     .....................     .         . .   ... .     ...        .. .      .........................................  .   .    ..............   .  .     .     .   ...........      ..       .  .      ......  .  .    .    ..      ......    ...   .    ...        ..    .  .    .    .......   .. .   . ..       .    ..   .     .      .............................................................   ..       .  ...      . ....     .  .   .      .  ........................            .   ..   .    .....      .     .    .......        .  .  .......           .   .       .. .     ..............    .   ... .       .     ......................................................................................................................................................   .  ....     .  ...      ..       .............   .       .       . .      .....     .  ..              .      ....        .....    .. .     
lowQualScore                  :                                 0       4   666  0   0  444    0000 99 000  99 9999999  3   6666     2 4     4 444  22    0000  4 4  555     8888888   2      9 44444  1    1 4  5555   1 1 1  11     1111111111111  33   4 9  7   888   1   0   5   8 0   9999999999 5  1   99    7  7  000 0   5 555 5 0  555   88          0     22222222222222     55     5  5    222  0    00000     00000000  0     0   88   222222     0     4  8   8  8888    4   8          00000000000000000000000000000     0   0  00      2       2  5   555            000000000      2     2222222222  0   222222222222222222222222222222222222222   555      0      0     2 2 00   888    222222  5 0       000     555555555555555555555     0         2 5   000 0     555        55 3      00000000000000000000000000000000000000000  7   7    77777777777777   3  7     7     3   33333333333      33       2  0      777777  3  3    3    33      000000    555   0    555        00    0  3    3    7777777   33 7   3 33       0    00   5     0      0000000000000000000000000000000000000000000000000000000000000   55       5  555      5 5555     5  0   0      5  000000000000000000000000            0   55   0    55555      0     5    0000000        5  5  0000000           7   3       77 3     55555555555555    0   000 0       0     000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000   0  5555     5  000      00       0000000000000   5       5       5 0      55555     5  00              5      0000        00000    00 0     
consensus                     :                                CTTCCCCAC-AATC--AC-GCA-CT---TTAA----C--G---CA--T--AT---AC-CTTT--GCCCCA-C-AATCA-C---GC--ACTT----TA-A-CG---CATAT-A-TAC-CTTTGCCCCA-C-AA--TC-ACGC-ACTT----TAA-C-G-CAN-TTTCA---A------TGCGCA-TTT-G-TTTTCA-A-GCGTTTT-TTTCGTTGA-TAC----------AGCGAAAA--ATTGATT-GCT-TT-TTANT---ACT-GTTTTGGGT-TGAAAGATAA-TAAAGA-AA-AAAN-AN-TTGAGC-GACTTA-TCCAATTTA-TA-TAATA-GT-TGCAAACA-G---CA-AAAAGGAGAT-ATA--TTG-AGGGG-GATGCACTACTGACATC-CGAAAATCCACTGTTTGCCGCATTCCA-GC---G-----------ACGTGATAA-ATC-TAT-ACGCGG-TATTCTCGAGGAAGT-ATCCGTGTTTCGTTTT-ATGA-CTATTTTATTTGA-GTA--TTTCANTTT---CT-GTT-----GAT-ATATT---CTAA---------TAA---CAATAC-TGATTG-TATGGGAAGA-TGATTATTTTTT-CA-AAAGNAGCATAATCGTTGAAANCGGG------------GGGGGGGG-GGGGGTAAAAACGCA-TCC-CGAATC--TACACCACGAAATTTCGT-GGTATG-TAGGAGTAAC-GT-TCGT-TATATCAG------AGAAAAGTAGGGG-TAAC----G-GATATATCTAAAAGCATGT-AAA--TATTT-TG-TATTCT--CCCGCGACGT-AACCAC-AACA-ATTTT-TCTT-CTTT--AAAGGAG--A--GAAA---ATG-TGTG---TACATCATNTTCCG-GTAGTGTTAATAAGG-TA-CTTNGCGAAATT-GTGTATTTCAAAACTCGGNTCCAC-AATTACG-ATCT-CANAACCTTTACTTCATATATATATATTTTTCTTT-GTTTAGCCACAATTGCGAGTCTAAGTCACGTACANNAAAATCNAGCNNTTTTATTATGATNATAAATNGACANAATAAANTATAGTTC------TTTTTTTTTGGGTGGGGTGGGGGGTGNTGGTGTTGTTCGTTTGTTTTGTTTTTATTTTTTTTTATTNATACATG-ATGTATATAAAAAATGAATCAGTT-GATTTATCAAGNTACGTATAACTGAAGGCTTGNANTTTTTGCATTTGANCATAANCGANTATTTCCTTACANTATGTTCGTATAATGCTTGCA-CGNTTTATTAAAACACACTGAGNNATAAAGAANAAC--CAAGAATG-TTTCAAGCCTACTNNTTAAAAATAACGTTTTCAAAANGATAGGAGNCGGNGGGGGTATCTCCAGGTCCTAGCNAAACTGTGAGACCGGATTCTT-GT--AAAAC--CTGTGTATTTCAAAACTCGNACTGTTTCAAATNAAACTNGGACGCATGGGAAGACAANTATTACGTCAACTACTTAGCAATGTACTCAAGATGA
Reference ( gi|2 )            :                                CCTCCCCAC-AATC-CAC-GCAGCT---TTAA----C--G---CA--T--A----AC-CTTT--GCCCCA-C-AATCA-C---GC--ACTT----TA-A-CG---CATAT-A-TAC-CTTTGCCCCA-C-A---TC-ACGC-ACTT----TAA-C-G-CAC-TTTCA--TA------TGCGCA-TTT-G-TTCTCA-A-GCGTTTT-TTTCGTTCA-TAC----------AGCGAAAA--ATTGATT-GCT-GT-TTAGT---ACT-GTTTTGGG--TGAAAGATAA-TAAAGA-AG-AAAT-AT-TTGAGC-GACTTATTCCAATTTT-TA-TAATA-GTCTGCAAG-A-G---CA-AAAAA-AGA--ATA--TTG-AGGGG-GATGCACTACTGATATC-CGAAATTCCACTGTTTGCCG--------GC---G-----------ACG-GATAA-ATC-TA--ACGCGGTTATTCTCGAGGAAGT-GTTCGTGTTTCGTGTT-AT---CTATTTAATTTGA-GTA--TTGCAGTTT---CT-GAT-----GAT-ATATT---CTAA---------TAA---CAATAC-TAATTG-TATGGAAAGG-TGATTTTTTTTTTTAAAAGGAAGCATAATTGTTGAAA-----------------GGTGGGGG-GGGGGTAAAAACGCA-T-C-CGAAT---TACACCACGGAATTTCGTAGGTATGATAGGCGTAATCGT-TCGC-TATATCAA------AGGAAAGTAGGGGCTAAC----ATAATATATCTAAAAGCATGT-AAA--TATTT-TGTTATTCTTCCCTGCGATGT-AACCACAAACA-ATATT-TCTT-CTTT--AAAGGAG--A--GAAA---ATG-TGTG---TACATCATCGTCCGCGTTGTGTAAATAAAGATG-CTTGCCGAAAAT-ATGTATTTTAAAAACCGGGTTCACAAATTACGCAACTGCAAAATC-TGACTTCATAT-------TTTTTTTTTAG--AAG--A-AAT--CGAGTCTAAGTCACGTAC-CAAAAATCGAGCATTTTTATTA-GATTATAAATGGACAA---AAATTTTTGTTTTTGGGGTTTTTTTTTGGG-GGG--GGGAGGTG-----GTTGTT-GTTTGTTTTG-----A-TTTTTTTTATTGATACATGTATATATATAAAAGATGAATCAGTTGGATTTATCAAGATA-G-ATAACTGAA-GCT--GATTTTTTGC-TTTGAACATTATCAATTATTCT-TTACAGTATGTTCCTAAAATG-TTGCAATGCTT--GTAAAACA-AT--AAAAAAAAAAAAAAATTACAAGAATGTTTTCAAGCC--CTTTTT--AAATAAAATCTT--AAATGATAGGAGGGGGGGGGGGGGTCTTCAA--TCTAGCCAA---GTGAGA-CAAATTCTTCGTTAAAAACTTTTGTATATTTCAAAACTCGCA-TATTTCAAATAAAACTCGG-CGCATAGGAAGACAAGTATTACCGC-ACTACTTA-TA--GTACCAAGGATGA
gi|4                          :                                CTTCCCCAC-AATC--AC-GCA-CT---TTAA----C--G---CA--T--AT---AC-CTTT--GCCCCA-C-AATCA-C---GC--ACTT----TA-A-CG---CATAT-A---C-CTTTGCCCCA-C-AA--TC-ACGC-ACTT----TAA-C-GCCAC-TTTCA---A------TGCGCA-TTT-GTTTCTCA-A-GCG-TTT-TTTCATTCA-TAC----------AGCG-AAA--ATTGATT-GCT--T-TAATT---ACT-GTTTTGGGT-TGAAAGATAA-TAAAGA-GA-CAAA-AT-TTGAGC-GACTTA-TCCAATTTA-TA-TAATA-GT-TGCAAACA-G---CAGAAAAG-AGAT-ATA--TGG-AGGGG-AATGCACTACTGATAT--CGAAGATCCACTGTTTGCCGCTTTCCA-GC---G-----------ACGTGATAA-ATC-TA--ACGCGA-TATTCTCGAGGAAAT-ATTCGTGTTTCGTTTT-AT---CTATTT-ATTTGA-GTA--TTTCATTTT---CT-GTT-----GAT-ATA-T---CTAA---------TAA---CAATAC-TAATTG-TATGG-AAGA-TGA-----TTTTTTAAAAGAAAGCATAA-TGTTGAAAGG---------------GGGGGGGG-GGGGGTAAAAACGCA-TCC-CGAAT---TACACCAC-GAATTTCGT-GGTATG-TAGGAGTAATGGT-TCA--TATATCAA------AGAAAAGTAGGGG-TAAC----G-GATATATCTAAAAGCATGTAAAA--TATTTATG-TATACTGCCCCTCGGCGT-A
gi|3                          :                               cCTTCTCCAC-AAT---AC-ACA-CT---TTAAAA--C--A---CA--T--AT---AC-CTT---GCCCCA-C-AATTA-C---GC--AC-T----TA-A-CG---
gi|11                         :                           accccCTTCCCCAC-GAT--CAC-GCA-CT---TTAA----C--G---CA--T--ATAT-AA-CTTT--GCCCCA-C-GGTCA-C---GC--ATTT----TA-A-CG---CAgcagtttcaatacacatttttgttataaccttttttacgttaaacagcaaataaatagttattttattagtatgtggtggaagacaatatggaaacaaaaatgagcgatttaccctattgatattatacgcaacagtgtcagcaagagattatattagggggagggtccgacagagattccaccgtttgccgcatccagccctggcctggaagatacgtgataaatcttattatatggtattctcaagagtaatccatgttttgttttaataattattttatttaatttctcaccttgtattgatacataggtatatctagttaataacaattatgattgttatgggaagattgattatttcaaagtagcataatcttgaaggcggcagtaaagcagtcatgaatctacaccatgaattcgtggtatttggagttaccacattattatatggagaaggatatattaaaacatgtaataattatgcattctcctgcaaagtaaacacaacagttattcttgttttaaaaggagatagaaaaattgtgtacatcatttctggtagtgttaataaggttaccttagctaaattgtatatttcaaaac
gi|1                          : aagtaaatgcatgaaattgttttgctttaacccTTCCCAC-AATC--AC-GCA-CT---TTAC----T--G---CA--T--AT---ACTCTTT--GCCCCA-C-AATCATC---GC--ATTT----TA-A-CGG--CATAT-A-CTC-TTTTGCCCCA-C-A-----------A--T----CAA-C-G-CAC-TTTCA---A------TGCGCA-TTT-GTTTCTC--A-GCGTTTT-TTTCGTTTA-TAC----------A--GGAAA--ATTGATTGGC---T-TTATT---ACTAGTTTTGGGTTTGAAAGATAA-AAAAG--AG-ACATAAA-TTGAGC--ACTTA-TCCAATTTA-TA-TAATATGT-TGCAAG---G---CA-AAAAAGAGAT-ATA--TTGAAGGGG-AATGCCTTACTG-TAT--CGAAGATCC-CTGTTTGCC---------GC---G-----------ACGTGATAA-ATC-TA--ACGCGG-TATTCTCCGGAAAG--GTTCGTGTTTCGTTTA-AT---CTATTTAATTTG--GTATTTTTCAGTTT---TT-GTT-----GATAATA-T---CTAA---------TAA---CAATACTTAATTG-TATGG-AAGA-TGAATTTTTTTTACATAA-GAAGCATAA-TGCTGAAATTGGAAGGGGGGGGGGGGGGGGGGG-GGGGGTAAAAAAGCA-T-C-CCGATTAATACACCACGAAATTTCGT--GTATG-TAGGAGAAG--GT-TCGTATATATCAGAGAAATAGAAAAGTAGGGG-TAACGCGGATATTA-ATCTAAAAGCATGT-AGAACTA-TT-TATTATTCT--CCTGCGATGTAAACCAC-AACATATATT-TCTTGCTTT--GAAGGAG--A--GAAA---ATG-TGGT---TACATCCTCTCTCGCGTTGTGTAAATA---ATG-CTTGCCGAAAATGATGTATTTTTAAACTCGGGTTCAC-AATTACG-ATCT-CAAAATCTTTACTTCATATATATATATTTTTCTTT-GTTTAGCCA-AATTGCGAGTCTAAGTCACG-ACACAAAAATCGAGCTATTTTATTATGATTATAAATTGACAAAATAAAGTATAGTTC------TTTTTTTTTGGGTGGGGTGGGGGGTGTTGGTGTTGTTCGTTTG-TTTG-----ATTTTTTTTTATTGATACATG--TATATATAAAAGATG-ATCAGATTGA-TTATC-AGCTA-ATATAACTGAAGGCTTGGATTTTTTGCATTTGAA-A--ATCGAATATTTTCTTACAG--TGTTC-----AT-----C--CGCTTTATTAAAACACATTGAATAATAAAGAATAAC--CAAGAATG-TTTCAAG-C--CTTTTTAAAAATAACGTTTTCAAAATGA----AGTCAGAGGGGGTATCTCCAGGTCCTAGCGAAACTGTGAGACCAAATTCTT-GT--AAAAC--CTG-ATATTTCAAAACTCGCACTGTTTCAAATTAAACTAGG--GCATAGGAAGACAAGTATTACGTCAACTACTTAGCAATGTACTCAAGATGAgtttcaatgcatttgtttctacggcgttttttcgttgatacagcgaaatgtgtttattatg
gi|10                         :                                  TCCTCGC-AATC--AC-GC-GTT---TTAA----C--G---CAGAT--A----TC-CTAT---CCTCG-C-CGTCA-C---GC--ATTT----CA-A-CG---CATAT-A---C-CGTGTCCTCG-C-AA--TC-ACGC-ACTT----TAA-C-G-CGA-TTTCAT-TAAAATATTGCGCT-TTT-G-TTTTCA-CTGCGTTAT-CTT-GTTGA-TAC----------AACGAAAACTGTTAATT-a
gi|22                         :                                  gCCCCAC-AATC--AC-GCA-CT---TTAAATAAC--G---CA--TTTAT---AC-CTTT--GTCCCA-tt
gi|5                          :                                   gCCCACCAATC--AC-GCA-CT---TTAA----CAGG---CA--T--AT---AC-CTTTTTGCCCCATC-AATCA-C---GC--ACTT----TACA-CG---CATAT---CAC-CTT-GCCCCA-C-GAATTC-ACGC-ACTT----AAA-C-G-CACATTTCA--AA------TGCGCA-TTTTG-TTTTCG-G-GCATTTT-T--CGTTAAATACTATTCCAGCAAGCAAAAA--ACTGATT-GCTTAT-TTCATTGAACT-GTTT-GGT--TGAAAGATAAGTAAAGAGAC-AAAC-ACACTGAGCCGATTTACTC-AATTCGATACTAAT--GTTTGCAAACACG---CA-AAAAAGAAA--ATAAATTG-AGGGGAGATGC-CTACTGACATC--GAGAATCCACTGTCTGCCGTATTCCATGC---G-----------ACGTGAGAACATC-TAT-ACGCGGCTTTCCTCGAGGAAG--ATCAATGTTTCGT--T-ATGAATTATTTTATTTGAAGTA--TTTCA-TTT---CTAGTT-----GATCGTATT---CTAAGTCACAAATTAATACCAATAC-TGATTG-TATGGAA-GG-TTATTATTTT------AAAGTAGTATAAT-GTTGAAAACAGG------------GGGGGGGGCGGGGGTAAAAACGCA-TCC-CGAAT---TACTCCACGAA
gi|20                         :                           cccttatcgCCTAC-AATCACACCGCA-CG---T--A----C--GTGGCA--T--------T-CTTT--GCCCCA-C-AATCA-C---GC--ATTT----TA-A-CG---CAT
gi|8                          :                                        C-AATC--AC-GGGATT---TTAA----C--G---CA--T--AT---AC-CTTA--TCTTCG-CCGATCA-CCG-GC--ATTT----TA-A-CG---CATATCA-GAT-CCT---CCTG-C-A---TCAACGCTACTT----TAA-T-G-CAA-TTTCAATTA------CGTGCCTTTT-G-TTTTCA-A-CCACGTTATCTCGTTGA-TAC----------A--GAAAA--ATTG-TT-GAT-TT-TT
gi|14                         :                                  cccatcctctgg-CAC-GCA-TT---TTAA----C--G---CC--T--AT---AC-CGTG--TCCTCT-C-AATCA-C---GC--GTTT----TA-A-CG---GATAT-A-TAC-CTTATCCTCGCC-G---TC-ATGC-A-TT----TAA-C-G-TA
gi|19                         :                                                   tCAGCTGACTTTA----C--G---CA--T--ATAATACACTTT--GCCC-A-C-AATCA-C---AC--ACTT----TA-ACCG---CATtaaataccgtgtcctcgcaatcacgcatt
gi|11                         :                                                 cacatGCT---TTAA----C-------------------C-CCTT---CCCCA-C-GATCA-C---GC--ACTT----TA-A-CG---CATAT-A-TAA-CTTTGCCCCA-CGG---TC-ACGC-ATTT----TAA-C-G-CAG-TTTCA---A------T--GCA-TTT-G-TTTCTACG-GCG-TTT-TTTCGTTGA-TAC----------AGCGAAAttt
gi|12                         :                               aagtaaatgcatgaaattgttttGCT---GTCA----C--G---CA--T--AT---AC-CGTG--TCTTCG-C-AATCA-C---GC--ACTT----TA-A-CG---CA-AT--------TT--------C-A---T---TGC-GCTT----TAA--------------------------------TT-G-TTTTCA-CTGCGTTAT-CTT-GTTGA-TAC----------AGCG-AAA--ATTGtgtgtttattatg
gi|17                         :                                cccccatcctcacaatcatataccttatcctc----C--G---CA--T--AT---AC-CGTG--TCCTCG-C-AATCA-C---GC--ATTT----TA-A-TG---TATGC-A-CAG-TGTTCTCGCA---A---TC-ACGC-ATTT----TAA-C-A-CAttaatt
gi|3                          :                                                                                        C-CTT----CTCCA-C-AAT-A-C---AC--ACTT----TA-A-AA---CACAT-A-TAC-C-TTGCCCCA-CAA---TT-ACGC-AC-T----TAA-CGG-CAG-TTTCA---A------TACACA-TTT---TTGTTATA-ACCTTTT-TTACGTTAA--AC----------AGCAAATA--AATAGTT-ATT-TTATTAGT---A-T-GT----GG--TGGAAGACAA-TATGGA-AACAAAA-A---TGAGC-GATTTA-CCCTATTGA-TA-TTATA----CGCAAC-A-GTGTCA-GCAAG-AGATTATA--TT--AGGGG-GAGG--GT-CCGACA----GAGATTCCACCGTTTGCCGCATCCA--GCCCTGGCCTGGAAGATACGTGATAA-ATCTTATTATATGG-TATTCTCAAG--AGTAATCCATGTTTTGTTTTAATAA-TTATTTTATTTAA-TT---TCTCACCTTGTATT-GATACATAGGT-ATATCTAGTTAA---------TAA---CAATTA-TGATTGTTATGGGAAGATTGATTATTTC------AAAGTAGCATAATC-TTGAA-----------------------GGC-GGCAGTAAA---GCAGT-CATGAATC--TACACCATGAA--TTCGT-GGTAT--TTGGAGTTACCACATTAT-TATAT----------GGAGA--AGG--------------ATATAT-TAAAA-CATGT-AAT--AATTA-TG-CATTCT--CCTGCAAAGT-AAACAC-AACA-GTTAT-TCTT-GTTTTAAAAGGAGATA--GAAA---AAT-TGTG---TACATCATT-TCTG-GTAGTGTTAATAAGGTTACCTTAGCTAAATT-GTATATTTCAAAA
gi|22                         :                                                                                          accc--GCCCCA-C-AATCA-C---GC--ACTTTAAATA-A-CG---CATTT-A-TAC-CTTTGTCCCA-c
gi|20                         :                                                                                                  CCTA-C-AATCA-CACCGC--ACGT-------A-CGTGGCAT-------T-CTTTGCCCCA-C-AA--TC-ACGC-ATTT----TAA-C-G-CA
gi|19                         :                                                                                                    CA-C-A-TCA-----GCTGACTT----TA---CG---CATAT-AATACACTTTGCCC-A-C-AA--TC-ACAC-ACTT----TAACC-G-CAT-TTTt
gi|22                         :                                                                                                                                                         GCCCCA-C-AA--TC-ACGC-ACTTTAAATAA-C-G-CA---TTTA--TA----------CC-TTT-G-TCC
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                                                            GGA-GATGCACTATGGACATCGCAGAA--CCACTATTTGTCGCATTCCA-GC---G-----------ACGTGATAA-ATC-TA--GCGCGG-TATTCTca
gi|1                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATGT-AACCAC------ATTTTCTCTC-CTTC--AAAGCA---A--GAAATATATGTTGTGGTTTACATCag
gi|7                          :                                                                                                                                                                                                                                                                                           ttcccacaatcacgcactttactgcatatactctttgccccacaatcatcgcattttaacggcatatactcttttgccccacaatcaacgcactttcaatgcgcatttgtttctcagcgtttttttcgtttatacaggaaaattgattggctttattactagttttgggtttgaaagataaaaaagagacataaattgagcacttatccaatttatataatatgttgcaaggcaaaaaagagatatattgaaggggaatgccttactgtatcgaagatccctgtttgccgcgacgtgataaatctaacgcggtattctccggaaaggttcgtgtttcgtttaatctatttaatttggtatttttcagtttttgttgataatatctaataacaatacttaattgtatggaagatgaattttttttacataagaagcataatgctgaaattggaaggggggggggggggggggggggggtaaaaaagcatcccgattaatacaccacgaaatttcgtgtatgtaggagaaggttcgtatatatcagagaaatagaaaagtaggggtaacgcggatattaatctaaaagcatgtagaactatttattattctcctgcAAGGAA--ATAAAAA---ATG-TGTG---GACATCATGTTCCGGGTAGTGTTAATAAAG-TA-CTTTGCAGAATT-GTGTATTTCAAAACTCGGTTCCAC-AATTAC-------CACAACC-TTATT---TAT-------TTTTTTT-------AG--ACAAT--TG-GTT--AGTCACGTAC-ACAAAATCTA-CACTTTTA-TA-GATGATAAATGAA-AT---AAATctctctcgcgttgtgtaaataatgcttgccgaaaatgatgtatttttaaactcgggttcacaattacgatctcaaaatctttacttcatatatatatatttttctttgtttagccaaattgcgagtctaagtcacgacacaaaaatcgagctattttattatgattataaattgacaaaataaagtatagttctttttttttgggtggggtggggggtgttggtgttgttcgtttgtttgatttttttttattgatacatgtatatataaaagatgatcagattgattatcagctaatataactgaaggcttggattttttgcatttgaaaatcgaatattttcttacagtgttcatccgctttattaaaacacattgaataataaagaataaccaagaatgtttcaagcctttttaaaaataacgttttcaaaatgaagtcagagggggtatctccaggtcctagcgaaactgtgagaccaaattcttgtaaaacctgatatttcaaaactcgcactgtttcaaattaaactagggcataggaagacaagtattacgtcaactacttagcaatgtactcaagatgaa
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GG-GGG--GGGGGGTGGT---GTTGTT-GTTTGTTTTGTTTTTA-TTTTTTTT-TTTAT---TG-ATGTATATAAAAAATGAATCAGTT-GATTTATggcaaaatgaaagtagttttggttattt
gi|6                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATATCAACATTGAATTCGTTG-ATTTATCAA-ATACG-AT---TGAA-GCT--TAATTTTTGT-TTTGATC-TAAGCAATT----C-TTACATTAT--TTGTATAATGCTTGCA-TGATT--TT----CA-AC--AGATATAAAAAAAAAT-------AT---TTCAAGCTTACTGGTT--A--T----TTTT--AAAAGATAGGAAGGGGTG------TCTCCAG--CCTAGCCAA---GTGAGA--GGATTCT--GT---AAAC--TTGTGTATTTC-AAACTCGGA-TATTTC----AAAATTTGGACACATGGGAAGACAACTA

Unaligned ( gi|9 ): CATTCCTGCATGGATCACGCATTTACTGCATATACCCTTATTCCGCCGTCAACGCCATGTTAACCCGCTATACCGTGCCCTGCAATCAACCACTTTTCACGAGCAATTTCATTGGCTTTTTGTTTTCACTACGTTACTTCGTTGATACAAGCGGAAATTGTTGATGTTTT
Unaligned ( gi|13 ): TTTCATTGTTGATCTTTTTCTATTTCATTTTTCGAGTTTGTGCTGACGGCTGAAAAGCAAACTTACGTATCCTGATAATCATATTCTAACAAGAAAACATTAAACAAGGGGGAAGGGGGGGGGGGGGGGGGT
Unaligned ( gi|18 ): TATCAAAATTGAATTCGTTGATTTATCAAATACTATTGAAGATTAATTTTTGTTTTGATCTAAGCAATTCTTA
Unaligned ( gi|21 ): ACATGAAATGTCTAGTTTAACCCCCTTCCCCACAATCACGCACNTGAA
Unaligned ( gi|23 ): TACCCATCCTCGCATATCATTATACTACCTTATCCTCGCCGT
Unaligned ( gi|24 ): AAAATATGCATTAATAGTTCAAGTTTCCTTACACC

lowQualScore                  :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     111111111                                                                                                                                                                                                                                                                                                                                                                                                   
lowQualScore                  :                                        111           1111                              11111111111                   11                                         222222222                         111                     2222222222        11                     11                                 11                                      1111     333333333       1    111                  1          11                   11111111  333333333333                   33      1              111                  333                111                      33333333    44444444444444   111                 2       111        333333              2      66666666666666666666666                            33                  11     1      222222222   1111        222222             111111111     11              1   11     1111      22          1      1    1         1    11       11111                   1     2 1          1  111  1             1                       1      3333333       33333333333333333       44444     3333   111                 222                  1      3333333                  111     3333333            1   11        1111       1    1      000000000          11       22                                   11  444444          333         2     222         11                   444444444444444444444444444444444            222222        1        333      2222222222    1    1       222222              33         333      2         1  222    111                    2       1111        2                         1        22222             
lowQualScore                  :              4    3  666  3 3       44 000       3   3333     5      5 33  55 0  5555  44444444444   2     2 44  2   22      1 33  2    2     3  3  77 3 44     111111111 777    99999   8    4   777       4  5    0 4   1111111111 1      22       5    77 5 1 1 11   8  0 5   999         8        33  1 99 0    8      8        8   8     6666     555555555    0  4    666      8     6     1          77                   77777777  444444444444  99        6    6 00      3          3   555           11   8 666   0  1     88  111     8     8      8 3 44444444    00000000000000   444      8       8  0       111 0 6    444444    99        3      22222222222222222222222   8         0     8        33         3 3      22     0 3    999999999   7777     2  888888    3        555555555     33  2     2     0   33     3333      77  2    4  0      3    3  8      3    88       88888                   0     0 0 4    4   0  666  0   33 0   4  0                 1 0   3      7777777  1  0 11111111111111111       88888     2222   222     7        7  222      1 6 22      3  7   9999999      1 7  88     333     9999999            5   33        8888       2    3 7    000000000          33       00 0     0    1  0   0 8  8  0     3 66  000000 0    99  888 1       7     555   1 2 1 88  3      88  6   3 666666666666666666666666666666666 222 7   0  999999        3        444  22  7777777777    2    4  7    666666      1       00      1  777      3 11    7 3  555    999  88      7       1 3 0     1111     1  3     0         1      55 5        22222     2       
lowQualScore                  :              .    .  ...  . .       .. ...       .   ....     .      . ..  .. .  ....  ...........   .     . ..  .   ..      . ..  .    .     .  .  .. . ..     ......... ...    .....   .    .   ...       .  .    . .   .......... .      ..       .    .. . . . ..   .  . .   ...         .        ..  . .. .    .      .        .   .     ....     .........    .  .    ...      .     .     .          ..                   ........  ............  ..        .    . ..      .          .   ...           ..   . ...   .  .     ..  ...     .     .      . . ........    ..............   ...      .       .  .       ... . .    ......    ..        .      .......................   .         .     .        ..         . .      ..     . .    .........   ....     .  ......    .        .........     ..  .     .     .   ..     ....      ..  .    .  .      .    .  .      .    ..       .....                   .     . . .    .   .  ...  .   .. .   .  .                 . .   .      .......  .  . .................       .....     ....   ...     .        .  ...      . . ..      .  .   .......      . .  ..     ...     .......            .   ..        ....       .    . .    .........          ..       .. .     .    .  .   . .  .  .     . ..  ...... .    ..  ... .       .     ...   . . . ..  .      ..  .   . ................................. ... .   .  ......        .        ...  ..  ..........    .    .  .    ......      .       ..      .  ...      . ..    . .  ...    ...  ..      .       . . .     ....     .  .     .         .      .. .        .....     .       
lowQualScore                  :              4    6  444  6 3       66 444       1   8888     0      0 44  99 1  3333  44444444444   5     7 88  7   33      9 99  9    9     1  1  33 1 66     222222222 000    66666   0    0   222       0  8    7 0   5555555555 6      22       0    99 7 7 0 00   0  8 6   666         0        44  0 00 8    0      0        0   0     8888     888888888    8  6    888      0     7     3          55                   00000000  222222222222  22        7    7 33      3          2   666           44   0 666   8  4     88  888     8     0      0 8 88888888    00000000000000   000      0       0  0       000 8 2    444444    00        2      66666666666666666666666   0         8     0        00         8 2      55     0 2    222222222   5555     5  888888    2        000000000     88  5     5     0   88     8888      55  0    2  0      3    3  3      3    33       55555                   8     0 0 0    0   0  888  0   55 2   0  0                 0 7   3      3333333  0  7 33333333333333333       00000     7777   333     3        3  333      0 7 00      3  3   3333333      0 3  33     000     0000000            5   77        0000       0    3 3    777777777          00       77 7     6    4  8   6 0  0  8     2 00  222222 2    00  555 0       8     000   0 0 0 55  7      33  7   7 333333333333333333333333333333333 777 3   7  333333        3        333  00  0000000000    0    0  3    777777      0       33      0  333      3 33    3 3  777    000  00      3       0 3 7     0000     0  7     7         0      55 5        55555     5       
consensus                     :     CTTCCCCAC-AATC-AC---GC-A-CTTTAAC--G---CATATAC-CTTT--GCCCCG-CAATCA-C--GC--ACTT----TA-----------ACG-CATAT-A-TAC-CTTTGCCCCGCAA--TC-ACGC-ACTTT-AA-CG--C-AN-TTTCA--A------T---GCGC---A-TTT-GTTT-TCA-A-GCGTTTT-TTTCGTTGA-TAC----------AGCGAAAA--ATTGATT-GCTT--T-TTATT--ACT-GTTTTGGG-TTGAAAGATAA-TAAAGAGA-CAAAAN-TTGAGC-GACTTA-TCCAATTT-ATA-TAATA-GT-TGCAA-A----CA-GCAAAAAAGAGA-T-ATATTG-AGGGG-GATGCACTACTGACATCCGAGAATCCACTGTTTGCCGCATTCCA-GC------------GA--CGTGATAA-ATCT-A--ACGCGG-TATTCTCGAGGAAGTA-TTCGTGTTTCGTTTTA-T--ACTATTTTATTTG-AGTA--TTTCANTTTCT-GTTGAT-ATATA------TCTA----A---------TAA---CAATAC-TAATTGT-ATGGGAAGAT-G-ATTNTTTTTTT--AAAAG-AAGCATAAT-GTTGAAA---G--GGGGGG----------GGG-GGGGGTAAAAACGCA-TCCCGAAT--TACACCACGAAATTTCGT-GGTATG-TAGGAG-TA--A-C-GTTCGT-TATATCAG------AGAAAAGTAGGGG-TAA--CG-GATAT--ATCTAAAAGCATGT-AAA--TATTT-TG-TATTCT-CCCTGCGACGT-AACCAC-AACA-ATATTTCTT-CTTT--AAAGGAG--A--GAAAATGTGTGTACATCATCTTCCGCG-TNGTGTNAAT-AAGG-TG-CTTGNCGAAANTG-TGTATTTCAAAACTCGGGTTCAC-AATTACG-A-CT-CAAAATCTT-ACTTCATAT-TAT-TATTTTTC----TTTAG--A-AATTGCGAGTCTAAGTCACGTACACAAAAATCGAGCANTTTTAT-TATGAT------TATAAATGGACAAAATAAANTNTAGTTT------TTTTTTTTTGGGTGGGG-GGGGGGTG-TG-TGTTGTTCGTTT-GTTTTG-------A-TTTTTTTTATTGATACATG-ATATATATAAAAAATGAATCAG-TT-GATTTATCAAGATACGTATAACTGAAGGCTT-GANTTTTTGC-TTTGANC-TAANCAATTATTTCCTTACAGTATGTTCGTA-AATGCTTGC-ACGCTTT-TTAAAACA-A-TGAAAAATAAAAAAAAAC--CAAGAATG-TTTCAAGCC--CTTTTTA-AAATAA-GTTTTCAAAATGATAGGAG--GGGGGGGGTGTCTCCAG--CCTAGCCAA---GTGAGA-CGAATTCTT-GT--AAAAC--TTGTATATTTCAAAACTCGCA-TATTTCAAAT-AAACTCGG-CGCATAGGAAGACAAGTATTACNNCAACTACTTAGCAATGTACCNAGGATGA
Reference ( family-126 )      :     CTTCCCCAC-AATC-AC---GC-A-CTTTAAC--G---CATATAC-CTTT--GCCCCA-CAATCA-C--GC--ACTT----TA-----------ACG-CATAT-A-TAC-CTTTGCCCCACAA--TC-ACGC-ACTTT-AA-CG--C-AN-TTTCA--A------T---GCGC---A-TTT-GTTT-TCA-A-GCGTTTT-TTTCGTTGA-TAC----------AGCGAAAA--ATTGATT-GCTT--T-TTANT--ACT-GTTTTGGG-TTGAAAGATAA-TAAAGAAA-AAANAN-TTGAGC-GACTTA-TCCAATTT-ATA-TAATA-GT-TGCAA-A----CA-GCAAAAAGGAGA-T-ATATTG-AGGGG-GATGCACTACTGACATCCGAAAATCCACTGTTTGCCGCATTCCA-GC------------GA--CGTGATAA-ATCT-AT-ACGCGG-TATTCTCGAGGAAGTA-TCCGTGTTTCGTTTTA-TG-ACTATTTTATTTG-AGTA--TTTCANTTTCT-GTTGAT-ATAT-------TCTA----A---------TAA---CAATAC-TGATTGT-ATGGGAAGAT-G-ATTATTTTTTC--AAAAG-NAGCATAATCGTTGAAANCGG--GGGGGG----------GGG-GGGGGTAAAAACGCA-TCCCGAAT-CTACACCACGAAATTTCGT-GGTATG-TAGGAG-TA--A-C-GTTCGT-TATATCAG------AGAAAAGTAGGGG-TAA--CG-GATAT--ATCTAAAAGCATGT-AAA--TATTT-TG-TATTCT--CCCGCGACGT-AACCAC-AACA-ATTTTTCTT-CTTT--AAAGGAG--A--GAAAATGTGTGTACATCATNTTCCG-G-TAGTGTTAAT-AAGG-TA-CTTNGCGAAATTG-TGTATTTCAAAACTCGGNTCCAC-AATTACG-ATCT-CANAACCTTTACTTCATATATATATATTTTTCTTTGTTTAGCCACAATTGCGAGTCTAAGTCACGTACANNAAAATCNAGCNNTTTTAT-TATGAT------NATAAATNGACANAATAAANTATAGTTC------TTTTTTTTTGGGTGGGGTGGGGGGTGNTGGTGTTGTTCGTTT-GTTTTG--TTTTTATTTTTTTTTATTNATACATG-ATGTATATAAAAAATGAATCAG-TT-GATTTATCAAGNTACGTATAACTGAAGGCTTGNANTTTTTGCATTTGANCATAANCGANTATTTCCTTACANTATGTTCGTATAATGCTTGC-ACGNTTTATTAAAACACACTGAGNNATAAAGAANAAC--CAAGAATG-TTTCAAGCCTACTNNTTAAAAATAACGTTTTCAAAANGATAGGAGNCGGNGGGGGTATCTCCAGGTCCTAGCNAAACTGTGAGACCGGATTCTT-GT--AAAAC--CTGTGTATTTCAAAACTCGNACTGTTTCAAATNAAACTNGGACGCATGGGAAGACAANTATTACGTCAACTACTTAGCAATGTACTCAAGATGA
gi|1                          :       TTCCCAC-AATC-AC---GC-A-CTTTACT--G---CATATACTCTTT--GCCCCA-CAATCATC--GC--ATTT----TA-----------ACGGCATAT-A-CTC-TTTTGCCCCACAA--TC-A-----------A-CG--C-AC-TTTCA--A------T---GCGC---A-TTT-GTTT-CTC-A-GCGTTTT-TTTCGTTTA-TAC----------A--GGAAA--ATTGATTGGC----T-TTATT--ACTAGTTTTGGGTTTGAAAGATAA-AAAAGAGA-CATAAA-TTGAGC--ACTTA-TCCAATTT-ATA-TAATATGT-TGCAA-------G-GCAAAAAAGAGA-T-ATATTGAAGGGG-AATGCCTTACTG-TAT-CGAAGATCC-CTGTTTGCC---------GC------------GA--CGTGATAA-ATCT-A--ACGCGG-TATTCTCCGGAAAG-G-TTCGTGTTTCGTTTAA-T---CTATTTAATTTG--GTATTTTTCAGTTTTT-GTTGAT-A-ATA------TCTA----A---------TAA---CAATACTTAATTGT-AT-GGAAGAT-GAATTTTTTTTAC--ATAAG-AAGCATAAT-GCTGAAATTGGAAGGGGGGGGGGGGGGGGGGG-GGGGGTAAAAAAGCA-TCCCGATTAATACACCACGAAATTTCGT--GTATG-TAGGAG--A--A-G-GTTCGTATATATCAGAGAAATAGAAAAGTAGGGG-TAACGCG-GATATTAATCTAAAAGCATGT-AGAACTATTT-AT-TATTCT--CCTGCGATGTAAACCAC-AACATATATTTCTTGCTTT--GAAGGAG--A--GAAAATGTGGTTACATCCTCTCTCGCG-TTGTGTAAAT-AA---TG-CTTGCCGAAAATGATGTATTTTTAAACTCGGGTTCAC-AATTACG-ATCT-CAAAATCTTTACTTCATATATATATATTTTTCTTTGTTTAGCCA-AATTGCGAGTCTAAGTCACG-ACACAAAAATCGAGCTATTTTAT-TATGAT------TATAAATTGACAAAATAAAGTATAGTTC------TTTTTTTTTGGGTGGGGTGGGGGGTGTTGGTGTTGTTCGTTT-G-TTTG-------ATTTTTTTTTATTGATACATG--TATATATAAAAGATG-ATCAGATT-GA-TTATC-AGCTA-ATATAACTGAAGGCTTGGATTTTTTGCATTTGAA---AATCGAATATTTTCTTACAG--TGTTCAT------C------CGCTTTATTAAAACACATTGAATAATAAAGAATAAC--CAAGAATG-TTTCAAGC---CTTTTTAAAAATAACGTTTTCAAAATGA----AGTCAGAGGGGGTATCTCCAGGTCCTAGCGAAACTGTGAGACCAAATTCTT-GT--AAAAC--CTG-ATATTTCAAAACTCGCACTGTTTCAAATTAAACTAGG--GCATAGGAAGACAAGTATTACGTCAACTACTTAGCAATGTACTCAAGATGA
gi|10                         :       TCCTCGC-AATC-AC---GC-G-TTTTAAC--G---CAGATAT-CCTA--TCCTCG-CCGTCA-C--GC--ATTT----CA-----------ACG-CA--T-A-TAC-CGTGTCCTCGCAA--TC-ACGC-ACTTT-AA-CG--C-GA-TTTCATTAAAATATT---GCGC---T-TTT-GTTT-TCA-CTGCGTTAT-CTT-GTTGA-TAC----------AACGAAAACTGTTAATT-a
gi|11                         :                            g-CTTTAAC------------C-CCTT---CCCCA-CGATCA-C--GC--ACTT----TA-----------ACG-CATAT-A-TAA-CTTTGCCCCACGG--TC-ACGC-ATTTT-AA-CG--C-AG-TTTCA--A------T-----GC---A-TTT-GTTT-CTACG-GCG-TTT-TTTCGTTGA-TAC----------AGCGAAAtt
gi|12                         :                                  aagtaaatgcatgaaattgttttgCCTCA-CAATCA-T--AT--ACCT----TATCCTCGCTGTCACG-CATAT-A---C-CGTGTCTTCGCAA--TC-ACGC-ACTTT-AA-CG--C-AA-TTTCA--T------T---GCGCTTTA-ATT-GTTT-TCA-CTGCGTTAT-CTT-GTTGA-TAC----------AGCG-AAA--ATTGtgtgtttattatg
gi|14                         :          cccccatTC-AC---GC-A-TTTTAAC--G---CCTATAC-CGTG--TCCTCT-CAATCA-C--GC--GTTT----TA-----------ACG-GATAT-A-TAC-CTTATCCTCGCCG--TC-ATGC-A-TTT-AA-CG--T-Attaatt
gi|14                         :       TCCTCTC-AATC-AC---GC-G-TTTTAAC--GGA-TATATAC-CTTA--TCCTCG-CCGTCA-T--GC--A-TT----TA-----------ACG-TATAA-A-TAC-CGTGTCCTCGCAA--TC-ACGC-ATTtaaataccgtgtcctcgcaatcacgcatt
gi|15                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       tcacgcattttaacgcctataccgtgGGGGGGGGGGGTGGTGTTGTTGTTTGTTTTGTTTTTATTTTT-----TTTTTTAT-------TG-ATGTATATAAAAAATGAATCAG-TT-GATTTAT
gi|16                         :                                                                                                                                                                                                                                                                                                                                                                                         GGA-GATGCACTATGGACATCGCAGAA-CCACTATTTGTCGCATTCCA-GC------------GA--CGTGATAA-ATCT-A--GCGCGG-TATTCT
gi|17                         :                                    C--G---CATATAC-CGTG--TCCTCG-CAATCA-C--GC--ATTT----TA-----------ATG-TATGC-A-CAG-TGTT--CTCGCAA--TC-ACGC-ATTTT-AA-CA--C-Aag
gi|18                         :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TATCAAAATTGAATTCG-TT-GATTTATCAA-ATAC-TAT---TGAAGATT---AATTTTTGT-TTTGATC-TAAGCAATTCTT
gi|19                         :                                                             CA-CA-TCA----GCTGACTT----TA------------CG-CATAT-AATACACTTTGCCC-ACAA--TC-ACAC-ACTTT-AACCG--C-AT-TTTa
gi|2                          :     CCTCCCCAC-AATCCAC---GC-AGCTTTAAC--G---CATA-AC-CTTT--GCCCCA-CAATCA-C--GC--ACTT----TA-----------ACG-CATAT-A-TAC-CTTTGCCCCAC-A--TC-ACGC-ACTTT-AA-CG--C-AC-TTTCAT-A------T---GCGC---A-TTT-GTTC-TCA-A-GCGTTTT-TTTCGTTCA-TAC----------AGCGAAAA--ATTGATT-GCTG--T-TTAGT--ACT-GTTTTGGG--TGAAAGATAA-TAAAGAAG-AAATAT-TTGAGC-GACTTATTCCAATTT-TTA-TAATA-GTCTGCAA-G-----A-GCAAAAA-AAGA---ATATTG-AGGGG-GATGCACTACTGATATCCGAAATTCCACTGTTTGCCG--------GC------------GA--CG-GATAA-ATCT-A--ACGCGGTTATTCTCGAGGAAGTG-TTCGTGTTTCGTGTTA-T---CTATTTAATTTG-AGTA--TTGCAGTTTCT-GATGAT-ATAT-------TCTA----A---------TAA---CAATAC-TAATTGT-ATGGAAAGGT-G-ATTTTTTTTTTTAAAAGG-AAGCATAATTGTTGAAA-------GGTGG----------GGG-GGGGGTAAAAACGCA-T-CCGAAT--TACACCACGGAATTTCGTAGGTATGATAGGCG-TA--ATC-GTTCGC-TATATCAA------AGGAAAGTAGGGGCTAA--CATAATAT--ATCTAAAAGCATGT-AAA--TATTT-TGTTATTCTTCCCTGCGATGT-AACCACAAACA-ATATTTCTT-CTTT--AAAGGAG--A--GAAAATGTGTGTACATCATCGTCCGCG-TTGTGTAAATAAAGA-TG-CTTGCCGAAAATA-TGTATTTTAAAAACCGGGTTCACAAATTACGCAACTGCAAAATC-TGACTTCATAT-------TTTTTT----TTTAGAAGAAAT--CGAGTCTAAGTCACGTAC-CAAAAATCGAGCATTTTTAT-TA-GAT------TATAAATGGACAA---AAATTTTTGTTTTTGGGGTTTTTTTTTGGG-GGG--GGGAGGTG-----GTTGTT-GTTT-GTTTTG-------A-TTTTTTTTATTGATACATGTATATATATAAAAGATGAATCAG-TTGGATTTATCAAGATA-G-ATAACTGAA-GCT--GATTTTTTGC-TTTGAACATTATCAATTA-TTCTTTACAGTATGTTCCTAAAATG-TTGCAATGCTT--GTAAAACA-A-TAAAAAA-AAAAAAAAATTACAAGAATGTTTTCAAGCC--CTTTTT--AAATAAAATCTT--AAATGATAGGAGGGGGGGGGGGGGTCTTCAA--TCTAGCCAA---GTGAGA-CAAATTCTTCGTTAAAAACTTTTGTATATTTCAAAACTCGCA-TATTTCAAATAAAACTCGG-CGCATAGGAAGACAAGTATTACCGC-ACTACTTA-TA--GTACCAAGGATGA
gi|20                         :         CCTAC-AATC-ACACCGC-A-CGT--AC--GTGGCAT---T-CTTT--GCCCCA-CAATCA-C--GC--ATTT----TA-----------ACG-CAT
gi|21                         :     CTTCCCCAC-AATC-AC---GC-A-CNTGAA
gi|22                         :                               acatgaaatgtctagtttaacccc--GCCCCA-CAATCA-C--GC--ACTTTAAATA-----------ACG-CATTT-A-TAC-CTTTGTCCCA
gi|3                          :                                                 C-CTT----CTCCA-CAAT-A-C--AC--ACTT----TA-----------AAA-CACAT-A-TAC-CTT-GCCCCACAA--TT-ACGC-ACTT--AA-CGG-C-AG-TTTCA--A------T---ACAC---A-TTT-TTGT-TAT-A-ACCTTTT-TTACGTTAA--AC----------AGCAAATA--AATAGTT-ATTT--TATTAGT--A-T-GT----GG-T-GGAAGACAA-TATGGAAA-CAAAAA-T-GAGC-GATTTA-CCCTATTG-ATA-TTATA----CGCAACAGTGTCA-GCAA----GAGA-TTATATT--AGGGG-GAGGG--T-CCGACA---GAGATTCCACCGTTTGCCGCAT-CCA-GCCCTGGCCTGGAAGATACGTGATAA-ATCTTATTATATGG-TATTCTCAAG--AGTAATCCATGTTTTGTTTTAATA-ATTATTTTATTTA-ATT---TCTCACCTTGT-ATTGAT-ACATAGGTATATCTAGTTAA---------TAA---CAATTA-TGATTGTTATGGGAAGATTG-ATTATTTC------AAAG-TAGCATAATC-TTGAA-----------------------GGC-GGCAGTAAA---GCAGTCATGAAT-CTACACCATGAA--TTCGT-GGTATT-T-GGAGTTACCA-C-ATT-AT-TATAT-GG------AGAA----------------G-GATAT--AT-TAAAA-CATGT-AAT--AATTA-TG-CATTCT--CCTGCAAAGT-AAACAC-AACA-GTTATTCTT-GTTTTAAAAGGAGATA--GAAAAATTGTGTACATCAT-TTCTG-G-TAGTGTTAAT-AAGGTTACCTTAGCTAAATTG-TATATTTCAAAAC
gi|4                          : acccCTTCCCCAC-AATC-AC---GC-A-CTTTAAC--G---CATATAC-CTTT--GCCCCA-CAATCA-C--GC--ACTT----TA-----------ACG-CATAT-A---C-CTTTGCCCCACAA--TC-ACGC-ACTTT-AA-CG--CCAC-TTTCA--A------T---GCGC---A-TTT-GTTTCTCA-A-GCGTTTT-TT-CATTCA-TAC----------AGCGAAAA---TTGATT-GCTT--T-A-ATT--ACT-GTTTTGGG-TTGAAAGATAA-TAAAGAGA-CAAAAT-TTGAGC-GACTTA-TCCAATTT-ATA-TAATA-GT-TGCAA-A----CA-GCAGAAAAGAGA-T-ATATGG-AGGGG-AATGCACTACTGATAT-CGAAGATCCACTGTTTGCCGCTTTCCA-GC------------GA--CGTGATAA-ATCT-A--ACGCGA-TATTCTCGAGGAAATA-TTCGTGTTTCGTTTTA-T---CTA-TTTATTTG-AGTA--TTTCATTTTCT-GTTGAT-ATA--------TCTA----A---------TAA---CAATAC-TAATTGT-AT-GGAAGAT-G-A----TTTTTT--AAAAGAAAGCATAAT-GTTGAAA---G--GGGGGG----------GGG-GGGGGTAAAAACGCA-TCCCGAAT--TACACCACG-AATTTCGT-GGTATG-TAGGAG-TA--A-TGGTTCA--TATATCAA------AGAAAAGTAGGGG-TAA--CG-GATAT--ATCTAAAAGCATGTAAAA--TATTTATG-TATACTGCCCCTCGGCGT-A
gi|5                          :        cCCCACCAATC-AC---GC-A-CTTTAACAGG---CATATAC-CTTTTTGCCCCATCAATCA-C--GC--ACTT----TAC----------ACG-CATAT---CAC-CTT-GCCCCACGAATTC-ACGC-ACTTA-AA-CG--C-ACATTTCA--AA-----T---GCGC---A-TTTTGTTT-TCG-G-GCATTTT-T--CGTTAAATACTATTCCAGCAAGCAAAAA--ACTGATT-GCTTATT-TCATTGAACT-GTTT--GG-TTGAAAGATAAGTAAAGAGACAAACACACTGAGCCGATTTA-CTCAATTCGATACTAATG-TT-TGCAA-A----CACGCAAAAAAGAAAAT-AAATTG-AGGGGAGATGC-CTACTGACATC-GAGAATCCACTGTCTGCCGTATTCCATGC------------GA--CGTGAGAACATCT-AT-ACGCGGCTTTCCTCGAGGAAG-A-TCAATGTTTCG--TTA-TGAATTATTTTATTTGAAGTA--TTTCA-TTTCTAGTTGATCGTAT-------TCTA----AGTCACAAATTAATACCAATAC-TGATTGT-AT-GGAAGGT-T-ATTATTTT------AAAG-TAGTATAAT-GTTGAAAACAG--GGGGGG----------GGGCGGGGGTAAAAACGCA-TCCCGAAT--TACTCCACGAA
gi|6                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cccttatcgATATCAACATTGAATTCG-TT-GATTTATCAA-ATACG----ATTGAAG-CTT--AATTTTTGT-TTTGATC-TAAGCAATT-----CTTACATTAT--TTGTATAATGCTTGC-ATGATTT-TC--AAC------AGATATAAAAAAA---------AATA-TTTCAAGCTTACTGGTTA---------TTTTTAAAA-GATAGGA------AGGGGTGTCTCCAG--CCTAGCCAA---GTGAGA--GGATTC-T-GT---AAAC--TTGTGTATTTC-AAACTCGGA-TATTTCA----AAATTTGGACACATGGGAAGACAACTA
gi|7                          :                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAGGAA--ATAAAAAATGTGTGGACATCATGTTCCG-GGTAGTGTTAAT-AAAG-TA-CTTTGCAGAATTG-TGTATTTCAAAACTCGGTTCCAC-AATTAC-------CACAACCT------------TATTTATTTTT-----TTTAG--ACAATTG---GTT--AGTCACGTACA-CAAAATCTA-CACTTTTATAGATGATAAATGAAATAAATGG-CAAAATGAAA-GTAGTTT------Tgt
gi|8                          :             C-AATC-AC---GGGA-TTTTAAC--G---CATATAC-CTTA--TCTTCGCCGATCA-CCGGC--ATTT----TA-----------ACG-CATATCA-GAT-CCT---CCTGC-A--TCAACGCTACTTT-AA-TG--C-AA-TTTCA--A------TTACGTGC---CTTTT-GTTT-TCA-A-CCACGTTATCTCGTTGA-TAC----------A--GAAAA--ATTG-TT-GATT--T-TTggttattt
gi|9                          :    cccatcctctggATC-AC---GC-A--TTTACT--G---CATATAC-CCTT--ATTCCG-CCGTCAAC--GCC-ATGT----TA-----------ACC-CGC-T-A-TAC-CGT-GCCCTGCAA--TC-AACC-ACTTTTCA-CGAGC-AA-TTTCA--T------T---G-GC---T-TTTTGTTT-TCA-CTACGTTAC-TT-CGTTGA-TACA---------AGCGGAAATTGTTGA-T-GTTT--T-