lowQualScore : 111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 22222222222 11111 11 888888888888888888888888888888888888888888888888888 88888888888888888888888888888888888888888888888888888888888888 1 000000000000000000000000000000000000000000000000000000000 2222222222 1111111 1 2222222 111111 111111 111111 11111 1 222222222222 11 1111111 0000000000000000000000000000000000000000000000000 1 2222 000000000000000000000000000000000000000000000000000000 44444444444444444444444444444444444444444444444444444444444444444 4444444444 666666666666666 11 33333333333333333333333333333333333333333 1 1 111111 1 8888888888888888888888888888 1 22 11 88888888888888888888888 11111 33333333333333 444444444444 1 5555555555555555 1 22222 3333333333333333333333333333333333333333333333 111 11 22222222 44444 99999999999999999999999 44444444 1 222222222222222222222222222222222222222222222222222222222222222222222 222222222 111111111 22 5555 1111
lowQualScore : 7 88 1 0 77777777777 5 5 22222 88 1 8 888888888888888888888888888888888888888888888888888 4 66666666666666666666666666666666666666666666666666666666666666 3 3 44 55 7 4 4 55 55 222222222222222222222222222222222222222222222222222222222 4 9999999999 8888 4 66 4 3333333 4 66 4 777 4 777 0 4 9999999 66 2 4 222222 4 4 444444 4 777 222222 22222 4 66 66 0 1 555555555555 11 0 6666666 55 2222222222222222222222222222222222222222222222222 0 5 66 2222 3 3 777 55 999999999999999999999999999999999999999999999999999999 2 33 33333333333333333333333333333333333333333333333333333333333333333 3 0 0000000000 5 44 4 1 444444444444444 1 777 3 3 3 11 77 3 9 6 66666666666666666666666666666666666666666 55 1 4 6 4 555555 44 5 2 1 4 1 4 4444444444444444444444444444 2 8 4 8 88 22 3 8888 77777777777777777777777 1 1 4 0 11111 33333333333333 77 4 4 4 1 444444444444 3 4 5 5 3 8888888888888888 6 6 0 55555 3 6 6 0000000000000000000000000000000000000000000000 8 1 8 3 444 11 22222222 2 6 22222 4 3 9 11111111111111111111111 44444444 1 8 0 777777777777777777777777777777777777777777777777777777777777777777777 888888888 222222222 33 1111 5 66 5 5 6 8888
lowQualScore : . .. . . ........... . . ..... .. . . ................................................... . .............................................................. . . .. .. . . . .. .. ......................................................... . .......... .... . .. . ....... . .. . ... . ... . . ....... .. . . ...... . . ...... . ... ...... ..... . .. .. . . ............ .. . ....... .. ................................................. . . .. .... . . ... .. ...................................................... . .. ................................................................. . . .......... . .. . . ............... . ... . . . .. .. . . . ......................................... .. . . . . ...... .. . . . . . . ............................ . . . . .. .. . .... ....................... . . . . ..... .............. .. . . . . ............ . . . . . ................ . . . ..... . . . .............................................. . . . . ... .. ........ . . ..... . . . ....................... ........ . . . ..................................................................... ......... ......... .. .... . .. . . . ....
lowQualScore : 3 33 0 7 11111111111 7 0 55555 88 4 0 000000000000000000000000000000000000000000000000000 0 88888888888888888888888888888888888888888888888888888888888888 6 3 66 66 5 5 0 55 55 666666666666666666666666666666666666666666666666666666666 4 1111111111 1111 4 11 4 0000000 0 66 4 888 4 888 9 4 6666666 11 9 4 888888 4 4 666666 4 888 222222 33333 4 99 99 0 2 666666666666 00 4 2222222 44 4444444444444444444444444444444444444444444444444 4 0 99 2222 6 6 222 00 777777777777777777777777777777777777777777777777777777 9 99 00000000000000000000000000000000000000000000000000000000000000000 6 9 4444444444 4 66 6 3 000000000000000 3 111 3 3 3 55 33 3 2 7 44444444444444444444444444444444444444444 00 4 1 0 0 888888 66 7 9 2 4 8 4 3333333333333333333333333333 5 3 0 0 33 77 6 5555 99999999999999999999999 6 7 4 1 11111 11111111111111 11 4 4 4 8 444444444444 0 4 0 0 9 5555555555555555 7 7 2 00000 3 7 7 3333333333333333333333333333333333333333333333 0 4 0 0 000 00 00000000 5 0 77777 0 2 2 00000000000000000000000 55555555 2 8 0 888888888888888888888888888888888888888888888888888888888888888888888 000000000 222222222 99 1111 0 99 0 5 7 8888
consensus : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGG-A-----TATTTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G------TCC--CC-----C-------------C------------ACA--CAC-ATGT-ATA--C-GAATATATGGGAG-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACT-NGTAT-ATC---CAAT-GTAAA---TTAAAATG-TT------TTTT--CGACACGAT-A------G-AATT-CGATAATA-----CA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACA-AAAAT-CACATGTGTTT--GATT---TCTG-AAAAT-ATAT-T-GG--GTCGGCGCGATAGC-G-CCC-TTGGCGN-TGT--TT-ATG-A-AAGCG-CAT-TGTAAAGTCCACG-CAAATTCG--GAGGG------T-TTTTTCGGC----------------------A-AA----------------------AAAGAA-CTA-AAGGC---TCAGAG--TCCGCTAATCTGGGT--T-CA--CT---GTTTGACTTCC--CGAAAG-AGG-TG-T--AAAA-TATA-TTGGA-TCGGAG-GATAGCAGACCCTTT---GGCGGTGTTTAA-GAAAGAGCAT--TGTGTAATCCATGCAAA-TTCGAAGGGTT-TCCCC-CAACAAAAGAACTAG-AGTCCC-CGAGTT-CC--TAATCC-----------G---GACGTCTAGCAAAGAAG-GTGT-GAAA-TGTATT-GAGTCGGCG-AGATAC----CAGATT----TACGGGCGGT-GTTT-AGAGAAGAAAA-TTGTTCCAAT-----GAACAG------TTC-----TC-GAT-TTTACAAAA-ACTTA-TGAAA-AT-TGT-CAAGTCAAAACC-ACAA-TG-GACAATGC-A-AA--T-CGAT---ATAT-TAC-GAGCGAN----ATTAAAAG-ATCG-ACGTCGGATTA-AAAAAAAAT-TC--------------------G--GGT-GGTGGTACAAAAAC-TCC-CGT---AC--GATT-----T--TAGTATTCGTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTCAT---CGTANAAAATTAGCA-TCT-TCATAAGTTGGTAAT-ATTTTAAAA-GCTTGGCTAAAAGTAGGAAA-ATATTA-CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCATCATAAT-------T-TTTT--TNGA--GGGGA-GGGGGT--ATAAAAATCCAC-AT--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
Reference ( gi|1 ) : AATGTGAAT--TAATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGG-A-----TATTTAGTACCTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTATCT-GATGAAA---------G------TTC--CC-----C-------------C------------ACA--AAC-ATGT-ATA--C-AAATATATGGTAG-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACT-TGTAT-ATC---CAAT-GTAAA---TTAATATG-TG------TTTT--CGACACGAT-A------G-AATT-CGATAATG-----CA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-GAATA-------AA-TAA--------AAAAA------C----C-----AACAAC-AACA-AAAATATACATGTGGTT--GATC---TCTG-AAAAT-ATAT-T-GG--GTCGGCGCGATAGCAG-CTCTTTGGCGT-TGT--TT-ATG-A-AAGCA-CAT-TCTAAAATCCACG-CAAATTCG--GAGGG------T-TTTTTCGGC----------------------A-AA----------------------AAAGAA-CTA-ATTGC---TCAGAG--TCCGCTAATCTGGGT-ATCCA--CT---GTTTGACTTCC--CGAAAG-AGG-TG-T--AAAG-TATA-TTAGA-TCGGGGTGATAACAGACCCTTT---GGTGGTGTTTAA-AAAATAACAT--TGTGAAATCGATACAAA-TTCGAAGGATT-TCCCC-CAACAAAAGAACAAG-AGTCCC-CGAGTT-TCG-TAGTCT----------TG---GACGTCTAGCAAATAAG-GTGT-GAAT-TGTATT-GAGTCGGCG-AGATAC----CAGATTAAAATACGGGCGGT-GTTTGAGAGAAGAAAA-TTGTTCCAAT-----AAACAG------TAC-----TT-GAT-TTTACAAAA-ACTTA-TGAAA-ATATGT-CAAGTTAAAACC-ACAA-TG-GAGAATGC---AG--T-CAAT---ATAT-TAC-GAGAGAG----ATCAAAAG-ATCG-ACGTCGGATTAGAAAAAAAATATT--------------------G--GGTTGGTGATACAAAAAC-TCC-CAT---AC--GATT-----T--TAGTATTCGTATGATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCAT---TATAAAAAATTAGCAATCT-TCATATATTGGTCAT-ATTTTAAAATGCTTGGTTAAAAGTAGGAAA-ATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAAT-------T-TTTT--TAGA--AGGGATGGGGGTTAATAAAAATCCAC-AC--TTCAGGT-GCTTGTG-CTGAAA--CTAGGCCT
gi|16 : AATGTGAAT--TGATATGAAGTGAAAGAA-----------AGCAC-TCTATATGTGATAAGGAA-----TA-TTAGTATTTAATTAC-AGATGA
gi|30 : ttgacattgtattaAATG---AT--TAATATGAAGTGAATGAA-----------AACAC-TCCACGT---ATAAGA-ACAAGTTATTTCGTA-TTATTTAC-AGAannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttaaaattatttgatgaaagtcacacacacacacac
gi|26 : gAATGTGAATGTTGATATGTAGTGAATAAATTTTTTAAAAAGGCATATCCACATGTGATACGG-A-----TATTTAGTA
gi|36 : ttgaacatggtactATGAAGTAAATGAA-----------AACAC-TCCAC--GTGATAAGA-A-----CAtttgaatacgaa
gi|14 : TGAAGTGAATGAA-----------AGTAC-TTCACATGTGATAAGG-A-----TATTTAGTATTTATTTAC-ACACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATCT--------------------------C--TC-----C-------------T------------ACA----C-ATGT-ATA--C-GAATATATGGGAG-AACA--AG--C--------------A-------------T-------------T--------------AATC-A--------GAAC---T-G--TC-TGACAA-------A-CACT-TGTAT-ATC---AAAT-TTAGA---TT-ATTTT-TT------TTTT--CGGCACGAT-A------A-AAAT-TTATAATA-----CA-TG---TCAGGG-----TCAA-G---TAA-ag
gi|35 : gTGAA-TCAATGAA-----------AGCAC-TCCACATGTGATAAGG-A-----TA
gi|10 : agGAATTGAATGAA-----------AACAC-TCCACAAGTGATAAGG-A-----TATTTAGTGTTTAATTAC-AGATGAG
gi|21 : ATGTAATAAGG-A-----TATTTAGTATTTATTTACAAGATGAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttgatgaaagtcctccacatgtatacgaatatatgagagaaaaagcatcatttcaaattgttaatcggactgttgacaaacactagtatatccaatgtaaattagaatgctggtttttttttcacacgatataattcgataatacatgtcaggctcaactaaaccgcctttttaaaaataaaaaaaaatattttttaaaaaccaacaataaaaccacttgtgtttgacttctgaaaatatattgggtcggctcggtgtttatgaatgcacattgtaaagtccacgcattttcggagga
gi|25 : ctAAAATTATTT-GATGAAA----------------TCC--CCTCCCTC-------------C------------TCA--CAC-ATGT-ATA--C-GAATATACGGGAG-AAAA--AG--C--------------ATCATTTGAAATCGT-------------T--------------AATC-G--------GGAC---ttctctttcttctttaaaattatctgatgaaagcaccccttccccctccccgcactctacacccacatgtatacgaatattata
gi|24 : tctctctctctctcAAAATCATCT-GATGAAA---------G------TCC--CC-----CACTGATCCACCCAC------------ACA--CAC-ATCT-GTA--C-GAGTATATAGGAG-AAAA--AG--C--------------A-------------T-------------C--------------A
gi|21 : tctctctctctctgttAAAATTATCT-GATGAAA---------GCACCCCTTC--CC-----C-------------CTCCCCGCACTCTACACCCAC-ATGT-ATA--C-GAATATtttcaaatcga
gi|3 : ctatgtaataaggatatttagtatttatttacaagatgagttctctttcttctttAAATTATTTTGATGAA----------G------T----CC-----A-------------C------------ACA--CAC-ATGT-ATA--CGAAATTTGTCGCAG-AAAAGCAATTC--------------A-------------T-------------TTCA-----------AATC-GTCAGATGAGGAC---T-G--TC-GGACAA-------AATACT-AGTAT-ATC---CAAT-GTAAA---TTAATGTT-TT------TCTT--CGACACGAT-A------G-AATT-CGATAATA-----CA-TG---TCAGGT-----AAAA-C---TAA-GTCG--CCTATTTT-TAA------------AAAT-AAATA-------AA-TAA--------AAATA------T----TTTTTAAAAAACTAAC----AATTCACATGTG--T--GATT---TCTG-AAAAT-ATAT-T-GG--GTCGGC----T-------------GCGG-TGT--TT-ATGTA-AAG-------------GTCCAAG-CAAATTCG--GATGG------T-GTTTTCCGC----------------------A-AA----------------------AAAtata
gi|29 : tctctctctccctctcAAATTATTT-GATGAA----------G------CCC--CC-----C-------------CCCCTCCACACACACA--CAC-ATGT-ATA--C-GAATATcccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|20 : tctccctctctcttcAATTATTT-GATGAAA---------G------TCA--CA-----CACA----------C------------ACA--CAC-ATGT-ATA--C-GAATAT-TGGGAG-AAAA--AG--C--------------A-------------T-------------CATTTCA--------AATC-GTTAATC--GGAC---T-G--TC-TGACAA-------A-TACT-
gi|2 : ATT-TTT-GATGAAAAGTAGTGCAG------TTCTACA-----C-------------A------------ACA--CACTATGT-ATATTC-GAATAT-TGGGAG-AAAA--AT--C--------------A-------------T-------------TCATTTAAAATCGTTAATC-G--------GAACATTTAG--TC-TG-CAAGACCAATA-TACTATGTATTATC---CAAT-GTTAAGACTTAA-ATG-T-------TTTT--CGACACGATCA------GTAATTCCGATTACGATCTACAGTGGGTCCAGGGCTTCTTCAA-CCTATGATATCGTTCGTA--TTATTA------------AGAT-ATATAACTTAAGAA-TAA--------AAATATTTTCTT----T-----AA-AGA-AGCA-ACAAT---CATGT-TTT--GACTTAGTCTGCAAAATAACCT-T-GGTTGTCGGCGCGGTGG-----TC---------TAT--CT-GTA-C-AAG-------TCCAGCAT--GCG-CAAATTCG--GGGGG------T-aaaatccttaaaacaaaaattacaatttttgtacaatatata
gi|10 : tcacattataatgTATTT-GATGAAA---------G------TCC--TC-----C--------------------------------AC-ATGT-ATA--C-GAATATATGAGAG-AAAA--AG--C--------------A-------------TCATTTCAAATTGTT--------------AATC-G--------G-AC---T-G--T--TGACAA-------A-CACT-AGTAT-ATC---CAAT-GTAAA---TTAGAATGCTGGTTTTTTTTT--C-ACACGAT-A------T-AATT-CGATAATA-----CA-TG---TCAGGC-----TCAA-C---TAA-ACCG--CCTT--TT-TAA------------AAAT-AAA-A-------AA-AAATATTTTTTAAAAA------C----C-----AACAAT------AAAAC-CACTTGTGTTT--GACT---TCTG-AAAAT-ATAT-T-GG--GTCGGC---------------TCGG----TGT--TT-ATG-A-ATGCA-CAT-TGTAAAGTCCACG-CATTTTCG--GAGGgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|5 : gaattgaatgaaaacactccacaagtgataaggatatttagtgtttaattacagatgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaTCT-GATGAAA---------G------TCC--CC-----C-------------C------------ACA--CAC-ATAT-GTA--T-ACGTATATGGAAGAAAAA--AG--C--------------A-------------TAATTTC-------T--------------AATC-G--------TTA------A--TCAGGATAT-------A-CACT-TGTAT-ATC---CAAT-GTAAA---TTAAAATG-TT------TTTT--CGACACAAC-A------G-A-----------------CA-TG---TCAGGT-----TCAA-T---TAA-ACCG--TCTA--TT-TGAACATATATAGATAAAT-AAATA-------AA-TAA--------AAAAA-----------C-----AACAAA-AACC-ACAAT---CATGTGTTT--GATA---GTTG-AAAAT-ATAT-T-TG--ATCTAGGCAACAGCAG-TCCTTTGGCAG-TGT--TT-GTG---AAGCA-CTT-TGTAAAGTACACG-AAAATTCA--GAAGGTTTGTTT-TTTTTTGGC----------------------A-AA----------------------AAAGAA-CTA-AAGGC---TCAGAG--TCCGTTCATCTGGGT-TTTCA--GT---GTTTGACTTCC--CGAAAG-AGG-TG-T--AAAA-TATA-TTGGA-TCAGAGCGATAGCAGACCCTTT---GGCGGCGTTTAA-GAAAGTGTAT--CATGTAATCCATGCAAA-TTCGAAGGGTT-T-TCC-CGACAAAAGAACTAG-AGTCCA-AGAGTTCCCT-TAG-CT----------AT---GACTTCTAGCAAAGAAG-GTGT-GAAA-TGTAT-----TCGGCG-ATATa
gi|4 : -------------C------------ACA--CAC-ATGTTATA--C-AA-TATTGGGAAG-AAAA--AG--CCATCATTTCAAATCG-------------T-------------T--------------AATCCG--------GGAC---T-GCTTC-TGACAA-------A-TACT-AGTGT-ATTGGGCAATTGTAAA---TAAATGGG-TA------TTTT---------AT-TTTTTTTG-AATT-CGATAATA------A-TC---TCAG-------TCAAAC---TAA--TCG--CCTA--ATATTA------------AAAT-AAATA-------AAATAA--------AAATA------TGTTTT-----AA-AA--AACT-AACAT-CACA---GGTTTGGAT---------GAAAT-ATATCT-GG--GTCGGCGCG----CAG----------GTATGT--T--ATG---------------TAAAAGTCACAACAAA--CGAAGAGGG------TGTTTTTCCGCAACCAAAAAAAAACCAAAAACAA-AA----------------------AAAGAAACAA-A--ACAAACCAAAGACTCCGCTAA---------------CT---GTT-GACTTCC--CGAA-G-AGG-TGCT--AAAA-TATA-TT-GA-TTAGAG--ATACCAG-CCCTTG---AGTCG----------AAGAGCAT--GATGTAATCCATGCAAA-TT-GAAGG-----TCCC-CAA-AAAAGAACTAG----------AGTT-CC------C------------------CG---AG-----GAG-GTGT-GAAA-TGTATT-GAGTCGGCG-AGATAC-----AGAT----------GCGGCCGTT----------AAA-TTGTTC-AAT-----GA----------TGT-----TCCGATCTTTACAAAT-ACTTA-TGAAA-AT-TGT-C-----AAAACC-ACAA-TGCGACAATGCCAAAA--TACGA----ATAT-TAC-GAGAGCGGGCAATTAAAAG-ATCG-ACGTC-GATT----CAAAAATGTA--------------------A--GGT-----GTACAAAAAC-TTC-CGTTGGAC--GATT-----TAGTTGTATTtgagtcggtccgcgaataacg
gi|6 : aGT-ACA--C-GAATATTTGGGAG-AAAA--AG--T--------------T-------------T-------------C--------------AA--------------A----T-G--TC-TGACAA-------G-CACT-AGTAT-ATC---CAAT-GTAAA---TTAAAATG-TT------TTTTTTCAACACGAT-A------G-AATT-CGATAATA-----CA-TG---TCAGGG------CAA-G---TAA-ATCG--CCTA--TT-TAA------------AAAT-AAATA-------AA-TAA--------AAATAGTTT--T----T-----AAAAACTAACA-A---T-CACATGTGTTT--GATT---TCTG-AAAAT-ATAT---GG--GTCGGCGCGGTG--------TTTAATGT-T-------------AAGTC-CAC--CGCAAGTCCACG-CAAATTCG--GGGGG------T-GTTTTCGGC----------------------A-AA----------------------AACAAA---A-A--------CAAAA------CTAAACTAAAT-A---AT-CT---GTTTGACTTCC--CGAAAG-AGG-TG-T--AAAA-TATA-TTGGA-TCGGAGGGATAGCAGACC-TTT---GACG-----TAA-GAG----CAT--TGTGCAATCCATGCAAA-TTCGAAGGGTT---CCC-CAACAAAAGAACTAG-AGTCCT-CGAG----------------------------GACTTCTAGCGAAAAAA-GTGT-GAAA-TGTATT-GAGTCGGCG-AGATAC----CAGATT----TAC-GGCGAT----------CAGAAAA-TTGTTCCAATGAACAGAACAG------TTC-----TC-GAT-TTTACAAAA-ACT-------------------GTCAAAACC-GCAA-TG-GACAATGC---A------AAT---ATtattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|19 : ---T-G--TC-TGACAA-------A-CACT-TGTAT-ATC---CAAT-GCAAA---TTAAAATG-TT------TTTT--CCACCCGAT-A------G-AATT-CGAAAATG-----CA-TG---TCAAAG-----TCAA-C---TAA-ACAG--CTTA--TT-TAG------------AAAT-AAATA-------AA--AATATTTATTAAAAA------C----C-----AACA------A-AAAAC-CACATGTGTTT--Gcga
gi|15 : ACTA-------A-CATT-TGTAT-ATC---CCAT-GTAAA---TCGAAATG-T--------TTT--CGCCACAGT-A------G-AATT-CGATGATA-----AC-TG---TCACGG-----TCGC-A---TCA-ACCG--CCTA--TT-TGA------------AAATCAAAAA-------AA-TAA--------ATAAA------C----A-----AA-AAC-AAAACAAAACACACTAGAGTTT--GATA---TCTG-AAAAT-ATAT-T-GG--GTTGGCGCGATAGCGG-CCCTTTGGCGA-TGT--CT-ATG-A-
gi|22 : ---TCTA-AAAAT-ATAT-T-GG--GTCGGCGCG-----------------GT-T-T--TT-ATG-T-AAG--------------TCCACG-CAAATTCG--GAGGG------T-GTCTTCGGC----------------------A-AAAGAAAAAAAAAGAAAAACCAACAAAAAA-CTA-AAGGC---TCAGAG--TCCGCTAATCTG
gi|13 : TA-AAAAT-ATAT-TTGG--ATCGGCGAGA-------CCCGTTGGCGG-TGT--TT--TA-AGAATCATCATGTGTAA--TCCCTG-CAAATTCG--AAGGG------T-TTCCCC-AC----------------------A-AG----------------------AAAAAA-CTAGA--GC---CCCGAG--TTC-CTAATCCGGG
gi|9 : tataaagcacttgtaaagtcaacgcaaattcggaggggtattcggcaaaaagaactaaaggctctgagtccgctaatctggttttccattgtttgacttccggaaagaggtg-AAAAT-ATAT---AG--GTCGGAGTGATAGCAGACCCTTTGGAGG-TGT--TT-AAG-A-AAGAG-TAT-TGTGTAATCCATG-CAAATTCG--AAGGGG-----T-TCCCTC--C----------------------ATAA----------------------AAAGAA-G-A-GTCCC---GC-GAG--TTTCCTAATCTTGG------A--C----GTCTAGC------AAAAAA-ATG-TG-T--TAAGATGTA-TTCGAGTTGGCGAGATACCAGA---TTTACGGGCAGTGTTTAAGAAAAAAACAT--Tacgtctagcaaagaaggtgtcgaaaagtcgccgccgataccgtcaga
gi|12 : agcctcagattctgctaatctgggtcattcaaattgtttgacttcccgaaagaggtgt-AAAAT-ATAT-T-GG--ATCGG------AG--A-CCCGTTGGCGT-GGT--TT-AAG-A-A-TCATCAT-TGTGTAATCCCTG-CAAATTCG--AAGGG------T-TTCCCC--C----------------------A-CA----------------------AAAAAA-CTAGAGT-C---CCCGAG--TTTCCTAATCCGGG------A--C----GTCTAGC--------AAAGAAGG-TG-TGAAAAG-Tctttcaataaacagttcttgattttacaaaaacttatgaaatattgtcaagttaaaaccacaatggacgatgcaaaatcaatatatttcgtgtgatattaaaagatcgaccttggattaaaaaagaacatttaccaaatcaaacagttatggggtgggtggttcaaaaactccagtacgattttagtat
gi|11 : gaaaagcacatgtaaagtcaacgcaaattcggagggggtttcggcaaaaagaactaaaggctctgagtccgctaatctggttttccattgtttgacttccggaaagagggtgtGT-TGTATTTGACG-A-TAGAG-CAT-TGTGTATTCCATG-CAAAATCG--AAGGG------T-TCC-----C----------------------C-AC----------------------AAAGAA-CTA----GC-------AA--TCC-TTAA------------------------GACTTCTAGCAAAAA-AGG-TG-T--GAAA-TGTA-TTGGAGTCGTGA-GAT-ACAGAcgccgcgataccggtcagattaagaga
gi|13 : ttttggatacccgaaagaggtgtaaatT-AT--A-AAGCA-C-T-TGTAAAGTCAACG-CAAATTCG--GAGGG------G-TATT-CGGC----------------------A-AA----------------------A-AGAA-CTA-AAGGC---TCTGAG--TCCGCTAATCTGGTT-TTCCA--TT---GTTTGACTTCC--GGAAAG-AGG-TG-TA-AAAA-TATATTTGGA-TCGGCG-------AGACCCGTT---GGCGGTGTTTTA-AGAAT--CATCATGTGTAATCCCTGCAAA-TTCGAAGGGTT-TCCCCACAAGAAAA-AACTAG-AG-CCC-CGAGTT-CC--TAATCC----------GG---GACGTCTAGCAAAGAAG-GTGTCGAA---------AAGTCGCCGCCGATAC----Ctaaggagaccaatgaacagaacagtttctcgattttaaaaaaacttatgaatattttcaaaaccaacaatggacagtgcaaaattcgatattagaagcgacattaaacgatcgacgtcgggttaaataaaatcttaagggtggtataaacacttcccataccgaattagtaattagtgttaatatta
gi|12 : -A-AAGCA-CAT-G-TAAAGTCAACG-CAAATTCG--GAGGG------G-GTTT-CGGC----------------------A-AA----------------------AA-GAA-CTA-AAGGC---TCTGAG--TCCGCTAATCTGGTT-TTCCA--TT---GTTTGACTTCC--GGAAAG-AGGGTG-T--AAAA-TATA-TTGGA-TCGG---------AGACCCGTT---GGCGTGGTTTAA-GAATCATCAT--TGTGTAATCCCTGCAAA-TTCGAAGGGTT-TCCCC-CA-CAAAAAAACTAG-AGTCCC-CGAGTT-TCC-TAATCC----------GG---GACGTCTAGCAAAGAAG-GTGT-GAA---------AAGTCGCCG-CGATACCGGTCAGATTAAGAgtcaga
gi|34 : gaG-CAAATTCG--GAGGG------TGTTTTCCGGA----------------------A-AA----------------------AAAGAA-ga
gi|9 : C---TCAGAT--TCTGCTAATCTGGGTCATTCAAATT---GTTTGACTTCC--CGAAAG-AGG-TG-T--AAAA-TATA-T-AGG-TCGGAGTGATAGCAGACCCTTT---GGAGGTGTTTAA-GAAAGAGTAT--TGTGTAATCCATGCAAA-TTCGAAGGGGT-TCCCT-CCATAAAA--AGAAG-AGTCCCGCGAGTT-TCC-TAATCT----------TG---GACGTCTAGCAAAAAAATGTGT-TAAGATGTATTCGAGTTGGCG-AGATAC----CAGATT----TACGGGCAGT-GTTTAAGAAAAAAACA-TTCTTTCAAT-----AAACAG------TTC-----TT-GAT-TTTACAAAA-ACTTA-TGAAATAT-TGT-CAAGTTAAAACC-ACAA-TG-GACGATGCAA-AA--T-CAAT---ATAT-TTC-GTGTGAT----ATTAAAAG-ATCG-ACCTTGGATTA-AAAAAGAACATTTACCAAATCAAACAGTTATGG--GGTGGGTGGTTCAAAAAC-TCC-AGT---AC--GATT-----T--TAGTATagaaaaaaaac
gi|3 : agcC---TCAGAG--TCCGCTAATCTGG-----------------TTGACATCC--AGAAAG-AGG-TG-TCCAATA-TATA-TTTGA-TCATAGGGATACCAGACC-TTT---GACA-CGT-------AAGAGCAG--TGTGTAATCCATGCAAAATTCGAAGGGT---CCCC-CAACAAAAGAACA-G-AGTCCC-CG-------------------------------------AGCA-----G-GTGTTGAAA-TGTATT-GAG-CGGCG-AGATAC----CAGATT----TACGGCCGTT-AT-------------A-TTGTTCCAAT-----GAATTG------TG------TC-GAT-TTTACAAAA-TCTTAGTGAAA-ATTTGT-----TCAAAACC-ACAA-TG-GTCAATGCC--AA-----AATTG-ATCT-TACCGAGCGGG----ATTAAAATTATCG-GTGCCGGATTACAAAAA-----TC--------------------GAAGG--AGTG-TACAAAAAC-TGC-CGT---AC--GATT-----T--TAGTATTCGTGTAA
gi|10 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaCCA--CTTGTGTTTGACTTC--------------TG----AAAA-TATA-TTGGG-TCGG------------CTC---------GGTGTTTAT-GAATGCACAT--TGTAAAGTCCACGCATT-TTCGGAGGAattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|11 : gaattgaatgaaaacactccacaagtgataaggatatttagtgtttaattacagatgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttgatgaaagtcctccacatgtatacgaatatatgagagaaaaagcatcatttcaaattgttaatcggactgttgacaaacactagtatatccaatgtaaattagaatgctggtttttttttcacacgatataattcgataatacatgtcaggctcaactaaaccgcctttttaaaaataaaaaaaaatattttttaaaaaccaacaataaaaTTTGGATACC--CGAAAG-AGG-TG-T--AA----ATG-TTGTA-TT----TGACGATAGAGCATT--------GTGT--------AT--------------TCCATGCAAA-ATCGAAGGGTT-CCCC----AC-AAAGAACTAGCAATCCT-TAA-----------------------------GACTTCTAGCAAAAAAG-GTGT-GAAA-TGTATTGGAGTC-GTG-AGATA-----CAGAT----------------------AAGGAGA---------CCAAT-----GAACAGAACAGTTTC-----TC-GAT-TTTAAAAAA-ACTTA-TG--A-ATATTT-----TCAAAACCAACAA-TG-GACAGTGC---AA-----AATTCGATAT-TAG-AAGCGAC----ATTAAACG-ATCG-ACGTCGGGTT--AAATAAAATCTT--------------------A--AG--GGTGGTATAAACACTTCC-CAT---ACCGAATTAGTAAT--TAGTGTTAATAT
gi|15 : t--AAAA-TATA-TTGGG-TTGGCGCGATAGCGG-CCCTTT---GGCGATGTCTAta
gi|13 : actaacatttgtatatcccatgtaaatcgaaatgttttcgccacagtagaattcgatgataactgtcacggtcgcatcaaccgcctatttgaaaatcaaaaaaataaataaacaaaaacaaaacaaaacacactagagtttgatatctgT--TGTAAAGTCAACGCAAA-TTCGGAGGGGTATTCGG-CAA--AAAGAACTAA-AGGCTC-TGAGTC--CGCTAATCTGGTTTTCCATTGTTTGACTTCCGG-AAA-GAG-GTGT-AAAAATATATTTGGATCGGCG-AGA--C----CCG-TT--------GGCGGT-GTTTTA-AGAAtga
gi|8 : tataaagcacAGTT-TCC-TAATCT----------TG---GACGTCTAGCAAAAAAG-ATGT-GAAC-AGTATT-GAGTTGGCG-AGATAC----CAGAT----GTACGGGCGGT-GTTTAAGAGAAGAAAA-TTGTTCCAAT-----AAACAG------TTA-----TC-GA--TTTACAAAATACTTA-TGAAA-AATTGT-CAAGTTAAATCT-ACAA-TG-GAAAATGCAA-AA--T-CGAT---ATGT-TAC-GAGTGAT----ATCAGAAG-ATCG-ACGTCGGATTAAAAAAAAtcatcatgtgtaatccctgcaaattcgaagggtttccccacaagaaaaaactagagccccgagttcctaatccgggacgtctagcaaagaaggtgtcgaaaagtcgccgccgataccgtcaga
gi|23 : CG-AGATAC----CAGATT----TACGAGCGGT-GTTTAGGAGAAGAAAA-TTGCT-AAAT-----GAACAC------TTT-----TC-GAT-TTTAC-AAA-ACTT-------------------TCAAAACC-ATAA-TG-GACAATGC---Atcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagatgttcatgtaaaattagcatcttataggtaatgattttaaaagcttgctaaaagtagaaaat
gi|7 : GATAAGAAAAATTGTTCCAAT-----AAACAG------AACAGTTGTC-GAC-TTTACAAAT-ACTTA-TGAAA-AATTGT-CAA----AAACC-ACAACTG-GACAATGC---AAAAT-CGAC---ATACGTAC-ACGGGA------TTAAAAG-ATCGGACATCGGATTCAAAAA------TC--------------------G-----TAATG-TACAAAAAC-TTCACGT---AC--GATT-----T--TAGTATTaaatcg
gi|28 : AGAAGAACA-TTGCTACAAT-----AAACAA------TTT-----CT-GAT-ATTACAGAA-ACTTA-TGAAA-A-ATGTTCAAGTTAAAACC-ATAttctgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcatgtacatataaaatgagctctcataagttggtaatttaaaaagctggtaaatatttgaaagtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttcatgataatttttggggaggggtaaaaaccacatttcaggtgcctgtgctgaagacaggcc
gi|7 : CTTTTCATGTACATATAAAATGAGC--TCT--CATAAGTTGGTAAT----TTAAAAAGC-TGG-TAAATATTTGAAA-GT-----CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCATGATAAT-------T-TTT---------GGGGA-GGGG-----TAAAAA-CCAC-AT--TTCAGGT-GCCTGTG-CTGAAG--ACAGGCCcctgaatgcaaaat
gi|8 : gataagaaaaattgttccaataaacagaacagttgtcgactttacaaatacttatgaaaaattgtcaaaaaccacaactggacaatgcaaaatcgacatacgtacacgggattaaaagatcggacatcggattcaaaaatcgtaatgtacaaaaacttcacgtacgattttagtattttctgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTTCAT----GTAAAA--TTAGCA-TCT-T---ATA--GGTAATGATTTTAAAA-GCTTG-CTAAAAGTAGAAAA-
gi|17 : agtttcctaatcttggacgtctagcaaaaaagatgtgaacagtattgagttggcgagataccagatgtacgggcggtgtttaagagaagaaaattgttccaataaacagttatcgatttacaaaatacttatgaaaaattgtcaagttaaatctacaatggaaaatgcaaaatcgatatgttacgagtgatatcagaagatcgacgtcggattaaaaaaaatcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagaTGTACAT---T-TAAAAAAT-AGTA-TCTGTTA---AGTGGT-A--ATTTTAAAA-GCTT-GCTAAAGGTA-GAAA-ATATt
gi|3 : ATATAAAATTAGT--TTC-TCATAAGT--GTAAT--TTTTAAAA-ACTTG-CTAAAAGTAGAAAAGATATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN---CATAATCTTTTTTT-TTTT--TTGA--GGGG---GGGGT----AAAAATCCACCAT--TTCAGGT-GCCTGTGTCTGAAACCCCAGGCCTaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaatcttttggggggataaaaatccacatttcaggtgcctgtgttgaaaccaggcct
gi|27 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacCATAAT-------C-TTTTGTTTGG--GGGGA-GGGGG---ATAAAAATTCAC-AT--TTCAGGT-GCCTTTG-CTGAAA--CCAGGCCT
gi|18 : tctatattttttttttAT-------TATTTT--TAGA--GGAGGGGGAGGTTT-TAAAAATCCAC-AC--TTCAGGT-GCCCGTcaagac
gi|31 : tcaaaagcttgctaaaagtagaaactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacT-------T-TTTT--TGGAGGAGGGGAAGGGGTTTACAAAAATCCAC-AC--TTCTGGT-GCCTG
gi|33 : tttatattattttttT--TAGA--AAGGAGGGAGG-----GGAAATCCAT-AC--TTCAGGT-GCATGTG-
gi|2 : GGGA-GGGGG---ATAAAAATCCAC-ATTATTCAGGTGGCTTGAG-CTGAAA--C-AGGCCTata
gi|17 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttgggggggggggTGGGGG--GATAAAAATCCAC-AT--TTCAGGT-GCCTGTG-TTGAAA--CCAGGCCTaa
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|32 ): TGTATTACGGGTAATTAGTATTTAGTTACATATGAATTCTCTCTCTTAAAATTATCTGAT
Alignments
lowQualScore : 111111111111111111111 111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 22222222222 11111 666666666666666666666666666666666666666666666666666 5555555555555555555555555555555555555555555555555555555555 99999999999999999999999999999999999999999999999999 22222222 1111111 222222222 11111 11111 11111 222222222222 11111 1111111 33333333 55555555555555555 22 1111 000000000000000000000 333333333333 11111 111111111 6666666666666666666666666666666666666666666666666666666 555555555555555 2222222222222 22222222222 555555555555555555 1111111 11111 222222222222 22222 111111 2222222 22 111 11 111111111111111111111111111111111111 111 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 444444 11 1 1111 33 11111 1 11111111111111111111111111111111111111111111111111111111111111111111 222222222 11111111111 11111 333333 111
lowQualScore : 3 33 33333333333 5 11111 5 0 6 777777777777777777777777777777777777777777777777777 0 3 8888888888888888888888888888888888888888888888888888888888 77 3 44 9 55 3 3 55 55 00000000000000000000000000000000000000000000000000 4 66666666 3 3 777 55 4 1111111 3 44 3 666 7777 3 55 5 666666666 55 55 1 4 4 4 00000 4 777 00000 00000 4 66 66 8 0 222222222222 11111 4444444 4 22222222 1 00000000000000000 6 00 4 1 2 77 66 1 3333 4 4 4 66 1 999999999999999999999 0 555555555555 4 3 4 00000 55 777777777 3 8888888888888888888888888888888888888888888888888888888 7777 66 333333333333333 0 8888 4 4 8 4 99 4 4 3 9999999999999 99999999999 777 4 55 4 55 0 2 8888 4 2 99999 55 333333333333333333 2 3 7 3 2 55 444 1111111 1 3 7777 777 11111 1 444444444444 1 0 4 1 00000 111111 3 4 4 4 8 4 4 9999999 4 4 4 4 77 55 4 0 222 33 888 5 5 5 333333333333333333333333333333333333 33 6 6 111 6 99 6 99 2 666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 222222 6 5 88 5 5555 11 11111 5 1 1 66 5 99999999999999999999999999999999999999999999999999999999999999999999 777777777 44444444444 44 00000 4 222222 4 55 4 5 666
lowQualScore : . .. ........... . ..... . . . ................................................... . . .......................................................... .. . .. . .. . . .. .. .................................................. . ........ . . ... .. . ....... . .. . ... .... . .. . ......... .. .. . . . . ..... . ... ..... ..... . .. .. . . ............ ..... ....... . ........ . ................. . .. . . . .. .. . .... . . . .. . ..................... . ............ . . . ..... .. ......... . ....................................................... .... .. ............... . .... . . . . .. . . . ............. ........... ... . .. . .. . . .... . . ..... .. .................. . . . . . .. ... ....... . . .... ... ..... . ............ . . . . ..... ...... . . . . . . . ....... . . . . .. .. . . ... .. ... . . . .................................... .. . . ... . .. . .. . .............................................................................................................................. ...... . . .. . .... .. ..... . . . .. . .................................................................... ......... ........... .. ..... . ...... . .. . . ...
lowQualScore : 2 88 88888888888 0 11111 7 1 7 222222222222222222222222222222222222222222222222222 1 3 1111111111111111111111111111111111111111111111111111111111 33 1 22 1 00 6 6 00 00 88888888888888888888888888888888888888888888888888 0 00000000 2 6 000 55 0 8888888 6 66 6 444 7777 6 00 8 444444444 55 55 6 0 0 0 00000 0 000 00000 11111 0 11 11 9 1 888888888888 11111 4444444 4 22222222 0 99999999999999999 7 11 7 8 0 33 11 1 3333 4 4 4 11 1 222222222222222222222 8 555555555555 0 2 0 00000 00 000000000 6 2222222222222222222222222222222222222222222222222222222 9999 11 222222222222222 8 5555 0 0 0 0 55 0 0 2 5555555555555 77777777777 000 0 55 0 55 7 2 5555 0 2 44444 66 444444444444444444 6 6 3 6 3 00 111 8888888 4 3 7777 000 77777 1 777777777777 6 6 0 6 00000 555555 2 0 0 0 0 0 0 6666666 0 0 0 0 00 55 4 1 999 66 999 7 7 7 666666666666666666666666666666666666 55 7 7 777 7 22 7 22 5 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 444444 6 1 11 4 4444 77 66666 7 4 7 00 7 22222222222222222222222222222222222222222222222222222222222222222222 222222222 44444444444 33 00000 0 666666 0 55 0 0 444
consensus : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-NGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TT--CGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGC--------TTGGCGGTGTTTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-AG-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-AT-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATGCA-AAA--T-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATTA-AAAAA-----------AA-T----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTGTAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTA-CATATAAAATTAGC-ATCTTCATAAGT-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-ATAT-NACTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTCTATTTTNNAANNNNTCTTCGTCATAAT-------T-TTTT--TNGAGG---GGA-G-----GG-GG--T--ATAAAAATCCAC-AC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
Reference ( family-93 ) : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-NGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TT--CGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGC-G--C-CCTTGGCGNTGTTTATG-AAAGCGCATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-AG-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-AT-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATGC--AAA--T-CGATATAT-TAC--GAGCGA--NATTAAAAG-ATC-GACGTCGGATTA-AAAAA-----------AAAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTCAT----CGTANAAAATTAGC-ATCTTCATAAGTTGGTAAT-ATTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-ATAT-TACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCATCATAAT-------T-TTTT--TNGAGG---GGA-G-----GG-GG--T--ATAAAAATCCAC-AT--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
gi|1 : AATGTGAAT--TAATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTACCTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTATCT-GATGAAA---------G-------TT-C--CC-----C-------------C------------ACAAAC--ATGT-ATA--CAAATATATG--GTA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-TGTA-TATC---C----AAT-GT--AAATTAATATG---------TGTT--TT--CGACACGAT-AG-AATT-CGATAA-----TGCA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----GAATA-------AA-TAA--------AAAAA------C----C-----AACAAC-AACAAAAATATACAT--GTGGTTGATC---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGCAG--CTCTTTGGCGTTGTTTATG-AAAGCACATTCTA-AAATC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAATT---GCTCAGAG--TCCGCTAATCTGGGTAT---C--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAG-TATATT-AGATCGGG-GTG-ATAAC---AGACCCTTTGGTGGTG-TTTAAAAAATAACA---TTGTGA-AATCG--ATACAAA-TTCGA--AGGATTTCC----CC-CAACAAAAGAAC----AAGAGTCCC-CGAG-TTTCG-TAGTCTT-G-GACGTCTAGCAAATAAG-GTGT-GAA-TTGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TTAAAATACGGGCG-G-TGTTTGAG-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TACTTGAT-TTTACAAAA-ACTTA-TG-AAA-ATAT-G-TCAAGTTAAAACCA-CA-A-TG-GAGAATGC---AG--T-CAATATAT-TAC--GAGAGA--GATCAAAAG-ATC-GACGTCGGATTAGAAAAA-----------AAATA---------TTG--GGTT-GGTGATACAAAAAC-TCC-CAT---A-CGATTT--TAGT-A--TTCGTATGATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCAT----TATAAAAAATTAGCAATCTTCATATATTGGTCAT-ATTTTAAAATG---C-TTGGTTAAAAGTAGGAAA-ATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAAT-------T-TTTT--TAGAAG---GGATG-----GG-GG--TTAATAAAAATCCAC-AC--TTCAGGT-GCTTGTG-CTGAAA--CTAGGCCT
gi|10 : GAATTGAATGAA-----------AACAC-TCCACAAGTGATAAGGA-----TAT-TTAGTGTTTAATTAC-AGATGAG
gi|10 : TATTT-GATGAAA---------G-------TC-C--TC-----C------------------------------AC--ATGT-ATA--CGAATATATG--AGA-G-AAAA--AG--C--------------A--------------TCATTTCAAATTGTT------AATC-G--------G-AC-T---G--T--TGACAA-------A-CACT-AGTA-TATC---C----AAT-GT--AAATTAGAATGCTGGTTT--TTTT--TT--C-ACACGAT-AT-AATT-CGATAA-----TACA-TG---TCAGGC-----TCAA-C---TAA-ACCG--CCTT--TT-TAA------------AAAT-----AAA-A-------AA-AAATATTTTTTAAAAA------C----C-----AACAAT-----AAAAC-CACTT--GTGTTTGACT---TCTG-AAAAT-ATAT-TGG--GTCGGC----T---------------CGGTGTTTATG-AATGCACATTGTA-AAGTC-CA-----CGCATTTTCG--GAGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttgatgaaagtcctccacatgtatacgaatatatgagagaaaaagcatcatttcaaattgttaatcggactgttgacaaacactagtatatccaatgtaaattagaatgctggtttttttttcacacgatataattcgataatacatgtcaggctcaactaaaccgcctttttaaaaataaaaaaaaatattttttaaaaaccaacaataaaaccacttgtgtttgacttctgaaaatatattgggtcggctcggtgtttatgaatgcacattgtaaagtccacgcattttcggagga
gi|11 : gaattgaatgaaaacactccacaagtgataaggatatttagtgtttaattacagatgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaTTTGGATAC----CCGA-AAGA-GG-TG-T--AAA----TGTT-G-------------TA-----------TTTGACGAT----------AGAGCA---TTGTGT-ATTCC--ATGCAAA-ATCGA--AGGGTTCCC----C----ACAAA-GAAC----TAG-------CAA--TCCT--TAA-------GACTTCTAGCAAAAAAG-GTGT-GAA-ATGTA--TT-GGAGT-------CG-TG-AGATAC-----AGA---T-----------------------A-AGGAGA---------CCAAT-----GAACAGAACAGTTTCTCGAT-TTTAAAAAA-ACTTA-TG-AAT-AT-T---T----TCAAAACCAACA-A-TG-GACAGTGC--AAAATT-CGATAT---TAG--AAGCGA--CATTAAACG-ATC-GACGTCGGGTTA-AATAA-----------AATC----------TTA--AG---GGTGGTATAAACACTTCC-CAT---ACCGA-AT--TAGTAA--TTAGTGTa
gi|12 : t-AAAGCACAT-GTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-GTTT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GGGTG-T--AAAA-TATATT-GGATCGGA-G-------------ACCCGTTGGCGTGG-TTTAAGAATCATCA---TTGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CC-C-ACAAAAAAAC----TAGAGTCCC-CGAGTTTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGT-GAA-A-----------AGT-------CGCCG-CGATACCGGTCAGA---TT----taatatta
gi|13 : gaTAT--AAAGCAC-TTGTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-TATT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GG-TG-T--AAAAATATATTTGGATCGGC-G-----------AGACCCGTTGGCGGTGTTTTAAGAATCATCA----TGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CCACAAGAAAA-AAC----TAGAG-CCC-CGAG-TTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGTCGAA-A-----------AGT-------CGCCGCCGATAC----Caagaga
gi|14 : TGAAGTGAATGAA-----------AGTAC-TTCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-ACACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTAT----------------------------C-T--CT-----C-------------C-------------TACAC--ATGT-ATA--CGAATATATG--GGA-G-AACA--AG--C--------------A--------------T-------------T------AATC-A--------GAAC-T---G--TC-TGACAA-------A-CACT-TGTA-TATC---A----AAT-TT--AGATT-ATTTT---------TTTT--TT--CGGCACGAT-AA-AAAT-TTATAA-----TACA-TG---TCAGGG-----TCAA-G---TAA-gtcaga
gi|15 : gACTA-------A-CATT-TGTA-TATC---C----CAT-GT--AAATCGAAATG---------TTTT------CGCCACAGT-AG-AATT-CGATGA-----TAAC-TG---TCACGG-----TCGC-A---TCA-ACCG--CCTA--TT-TGA------------AAATCAAAAAAATA-------AA-TAA--------ACAAA-----------------AACAA--AACAAAA---CACACTAGAGTTTGATA---TCTG-AAAAT-ATAT-TGG--GTTGGCGCGATAGC-GGCC-CTTTGGCGATGTCTATG-A
gi|16 : AATGTGAAT--TGATATGAAGTGAAAGAA-----------AGCAC-TCTATATGTGATAAGGA------ATATTAGTATTTAATTAC-AGATGA
gi|16 : ttgacattgtatta--------AAAATTATTT-GATGAAA---------G-------TCAC--AC-----A-------------C------------ACACAC--Aannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttaaaattatttgatgaaagtcacacacacacacac
gi|17 : ttgacattgtattaaatgtgaattgatatgaagtgaaagaaagcactctatatgtgataaggaatattagtatttaattacagatgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttTGTACAT----T-TAAAAAAT-AGT-ATCTGT-TAAGT-GGTAAT---TTTAAAA-G---C-TTG-CTAAAGGTAG-AAA-ATAT-AACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA--------------AAT-------C-TTTT---------------G-----GG-GG--G--ATAAAAATCCAC-AT--TTCAGGT-GCCTGTG-TTGAAA--CCAGGCCTc
gi|18 : AT-------TATTTT--TAGAGG---AGG-G-----GG-AGGTT--TTAAAAATCCAC-AC--TTCAGGT-GCCCGT
gi|19 : tcaaaagcttgctaaaagtagaaactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnac-T---G--TC-TGACAA-------A-CACT-TGTA-TATC---C----AAT-GC--AAATTAAAATG---------TTTT--TT--CCACCCGAT-AG-AATT-CGAAAA-----TGCA-TG---TCAAAG-----TCAA-C---TAA-ACAG--CTTA--TT-TAG------------AAAT-----AAATA-------AA--AATATTTATTAAAAA------C----C-----AACA------AAAAAC-CACAT--GTGTTTG
gi|2 : ATT-TTT-GATGAAAAGTAGTGCAG-------TT-CTACA-----C-------------A------------ACACACT-ATGT-ATATTCGAATAT-TG--GGA-G-AAAA--AT--C--------------ATTCATTTAAAATCGT-------------T------AATC-G--------GAACATTTAG--TC-TG-CAAGACCAATA-TACTATGTATTATC---C----AAT-GTTAAGACTTAAATG----------TTT--TT--CGACACGATCAGTAATTCCGATTACGATCTACAGTGGGTCCAGGGCTTCTTCAA-CCTATGATATCGTTCGTA--TTATTA------------AGAT-----ATATAACTTAAGAA-TAA--------AAATATTTTCTT----T-----AA-AGA-AGCAACAAT---CAT--GT-TTTGACTTAGTCTGCAAAATAACCT-TGGTTGTCGGCGCGGTG------------------GTCTAT----------CTGTACAAGTC-CAGCATGCGCAAATTCG--GGGGG------T-
gi|2 : tcacattataatg--CTGTT-GACTTCACCTCCGACAAGATGGCTG-TT-GAAA-TATATT-GG-TCAGACG-G-GTGACCTTAGACCTTTAGAC-----TT----AAAGACCAGGCTTTTGTCAATCTTAATGCAAT-TTCGATTAGAG-TTCCAGAACC-TATCGAAAGATCAGTATAAAGTCT----AA-CTC----AGTC-C-GAGAGGTCT-----------GTGT---A-ATGTAATTT-G-ATTCCTGCTCCGCCG-AGATAC----C-GATAGTT----TACGGCCATT-TGTTT-AG-Agtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|2 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattTGTTCATGTACCATATAAAATACGT--TCTTCATAAGCAGGTAAT--TTTGAAAA-GGAGCGTTCGCTTAAA-TATGAAG-GTAC-GACTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTCTATTTT--------TCTT-GTCATAAT-------A-TCTT--GGGGGG---GGG-GGGGGAGG-GG--G--ATAAAAATCCAC-ATTATTCAGGTGGCTTGAG-CTGAAA---CAGGCCTatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|20 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagtAATTATTT-GATGAAA---------G-------TC-A--CA-----CACA----------C------------ACACAC--ATGT-ATA--CGAATAT-TG--GGA-G-AAAA--AG--C--------------A--------------T-------------CATTTCAAATC-GTTAATC--GGAC-T---G--TC-TGACAA-------A-TACT-A--A-AATC---CTTAAAAC-AA--AAATTACAATT---------TTTaa
gi|21 : ATGTAATAAGGA-----TAT-TTAGTATTTATTTACAAGATGAGgtacaatatata
gi|21 : ct--------AAAATTATCT-GATGAAA---------GCACCCCTTC-C--CC-----CTCCCCGCACTCTAC------------ACCCAC--ATGT-ATA--CGAATATttctctttcttctttaaaattatctgatgaaagcaccccttccccctccccgcactctacacccacatgtatacgaatattata
gi|22 : ctatgtaataaggatatttagtatttatttacaagatgagttctctttcttcttt---TCTA-AAAAT-ATAT-TGG--GTCGGCGCG------------------GTT-TTTATG------------TA-A-GTC-CA-----CGCAAATTCG--GAGGG------T-GTCTTCGGCAA----------------------AAGAAAAAAAAAGAAAAACCAACAA-------AAAACTAAAG---GCTCAGAG--TCCGCTAATCTGtata
gi|23 : CG-AGATAC----CAGA---TT----TACGAGCG-G-TGTTT-AGGAGAAGAAAA-TTGCTA-AAT-----GAACAC------TTTTCGAT-TTTACAAAA--CTT---------------------TCAAAACCA-TA-A-TG-GACAATGCA-AAA--T-CG
gi|24 : --------AAAATCATCT-GATGAAA---------G-------TC-C--CC-----CACTGATCCACCCAC------------ACACAC--ATCT-GTA--CGAGTATATA--GGA-G-AAAA--AG--C--------------A--------------T-------------C------A
gi|25 : tctctctctctctgtt--------AAAATTATTT-GATGAAA-----------------TC-C--CCTCCCTC-------------C------------TCACAC--ATGT-ATA--CGAATATACG--GGA-G-AAAA--AG--C--------------ATCATTTGAAATCG-T-------------T------AATC-G--------GGAC-tttcaaatcga
gi|26 : tctctctctctctcAATGTGAATGTTGATATGTAGTGAATAAATTTTTTAAAAAGGCATATCCACATGTGATACGGA-----TAT-TTAGTATTT
gi|27 : ttgaacatggtactTCATAAT-------C-TTTTGTTTGGGG---GGA-G-----GG-GG-----ATAAAAATTCAC-AT--TTCAGGT-GCCTTTG-CTGAAA--CCAGGCCTgaatacgaa
gi|28 : tctatattttttttt-AGAAGAACA-TTGCTACAAT-----AAACAA------TTTCTGAT-ATTACAGAA-ACTTA-TG-AAA-AA-T-GTTCAAGTTAAAACCA-TACC-TG----AATGC--AAA--caagac
gi|29 : AAATTATTT-GATGAA----------G-------CC-C--CC-----C-------------CCCCTCCACACACACACAC--ATGT-ATA--CGAATATat
gi|3 : tctccctctctcttcAAATTATTTTGATGAA----------G-------TC-C--AC--------------------------------ACACAC--ATGT-ATA--CGAA-ATTTGTCGCA-G-AAAAGCAATTC--------------A--------------T-------------TTCA---AATC-GTCAGATGAGGAC-T---G--TC-GGACAA-------AATACT-AGTA-TATC---C----AAT-GT--AAATT--AATG---------TTTTTCTT--CGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGT-----AAAA-C---TAA-GTCG--CCTATTTT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATA------T----TTTTTAAAAAACTAAC--AATT-CACAT--GTG--TGATT---TCTG-AAAAT-ATAT-TGG--GTCGGC----T--------------GCGGTGTTTATGTAAAG------------GTC-CA-----AGCAAATTCG--GATGG------T-GTTTTCCGCAA----------------------AA----------------------A-------A
gi|3 : tctctctctccctctcG---ACTCAGAG--TCCGCTAATCTGG------------------TTGACATC----CAGA-AAGA-GG-TG-TCCAATA-TATATT-TGATCATA-G-GGATACC---AGACC-TTTGACA-CG-T------AAGAGCA---GTGTGT-AATCC--ATGCAAAATTCGA--AGGGT--CC----CC-CAACAAAAGAAC-----AGAGTCCC-CGA--------------------------GCA-----G-GTGTTGAA-ATGTA--TT-G-AG--------CGGCG-AGATAC----CAGA---TT----TACGGCCG-T-TAT--------------A-TTGTTCCAAT-----GAATTG------TG-TCGAT-TTTACAAAA-TCTTAGTG-AAA-AT-TTG-T----TCAAAACCA-CA-A-TG-GTCAATGCCAAAA--T-TGATCT---TACC-GAGCGG--GATTAAAATTATC-GGTGCCGGATTA-CAAAA-----------A-------------TCGAAGG---AGTG-TACAAAAAC-TGC-CGT---A-CGATTT--TAGT-A--TTCGTGTAAcccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|3 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCATGTA-CATATAAAATTAGT-TTCT-CATAAGT--GTAAT--TTTTAAAA-A---C-TTG-CTAAAAGTAGAAAAGATAT-TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--CATAATCTTTTTTT-TTTT--TTGAGG---GGG-G-----GG---------TAAAAATCCACCAT--TTCAGGT-GCCTGTGTCTGAAACCCCAGGCCTattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|30 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattaAATG---AT--TAATATGAAGTGAATGAA-----------AACAC-TCCACGT---ATAAGAACAAGTTAT-TTCGTA-TTATTTAC-AGA
gi|31 : gT-------T-TTTT--TGGAGGAGGGGA-A-----GG-GG--TTTACAAAAATCCAC-AC--TTCTGGT-GCCTG
gi|33 : tttatattattttttT--TAGAAA---GGA-G-----GGAGG-------GGAAATCCAT-AC--TTCAGGT-GCATGTG-
gi|34 : GCAAATTCG--GAGGG------TGTTTTCCGGAAA----------------------AA----------------------A-------AGAAata
gi|35 : TGAA-TCAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAagaaaaaaaac
gi|36 : agATGAAGTAAATGAA-----------AACAC-TCCAC--GTGATAAGAA-----CA
gi|4 : -------------C------------ACACAC--ATGTTATA--C-AATAT-TG--GGAAG-AAAA--AG--CCATCATTTCAAATCG--------------T-------------T------AATCCG--------GGAC-T---GCTTC-TGACAA-------A-TACT-AGTG-TATTGGGC----AATTGT--AAAT--AAATGGGTATTTTATTTT--TT----------T-TG-AATT-CGATAA-----TA-A-TC---TCAG-------TCAAAC---TAA--TCG--CCTA--ATATTA------------AAAT-----AAATA-------AAATAA--------AAATA------TGTTTT-----AA-AA--AACTAACAT-CACAG--GT-TTGGAT---------GAAAT-ATATCTGG--GTCGGCGC----GC-A--------GGT-ATGTT-ATG-TAA-----------AAGTCACA------ACAAA--CGAAGAGGG------TGTTTTTCCGCAACCAAAAAAAAACCAAAAACAAAAA----------------------A-------AGAAACAAAACAAAC-CAAAGACTCCGCTAA-------------------CTGTT-GACTTC----CCGA-A-GA-GG-TGCT--AAAA-TATATT-G-ATTAGA-G---ATACC---AG-CCCTT-----GAG-TC----GAAGAGCA---TGATGT-AATCC--ATGCAAA-TT-GA--AGG----TC----CC-CAA-AAAAGAAC----TAGAGTTCC-C----------------------CG--------AGGAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATA-----CAGA---T----------GCG-GCCGTT-----------AAA-TTGTT-CAAT-----GA--TG------TTC-CGATCTTTACAAAT-ACTTA-TG-AAA-AT-T-------GTCAAAACCA-CA-A-TGCGACAATGCCAAAA--TACGA-ATAT-TACGAGAGCGGGCAATTAAAAG-ATC-GACGTC-GATTC-AAAAATGT--------AA-----------------GG-T-----GTACAAAAAC-TTC-CGTTGGA-CGATTTAGTTGT-A--TTag
gi|4 : a----CATATAAA--TAGT-TTCT-CATAATGCGTTAAT--TTTTAAAG-C---C-TTTGCT-AAAGTA-GAAA-ATA--TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAATCTTTC--T-TTTT--T------------G-----GG-GG--T---------------------------GCCTGTG-CTGGAAACCCAGGCCTtattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|5 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtaTCT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACACATATGT-ATA--CG--TATATG--GAA-GAAAAA--AG--C--------------A--------------TAATTTC-------T------AATC-G--------TTA------A--TCAGGATAT-------A-CACT-TGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TT--CGACACAAC-AG------------------ACA-TG---TCAGGT-----TCAA-T---TAA-ACCG--TCTA--TT-TGAACATATATAGATAAAT-----AAATA-------AA-TAA--------AAAAA-----------C-----AACAAA-AACCACAAT---CAT--GTGTTTGATA---GTTG-AAAAT-ATAT-TTG--ATCTAGGCAACAGC-AGTC-CTTTGGCAGTGTTTGTG--AAGCACTTTGTA-AAGTA-CA-----CGAAAATTCA--GAAGGTTTGTTT-TTTTTTGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGTTCATCTGGGTTT---T--CA--GTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCAGA-GCG-ATAGC---AGACCCTTTGGCGGCG-TTTAAGAAAGTGTA---TCATGT-AATCC--ATGCAAA-TTCGA--AGGGTTT-T----CC-CGACAAAAGAAC----TAGAGTCCA-AGAG-TTCCCTTAGCT-A-T-GACTTCTAGCAAAGAAG-GTGT-GAA-ATGTA--T------T-------CGGCG-ATATc
gi|6 : GT-ACA--CGAATATTTG--GGA-G-AAAA--AG--T--------------T--------------T-------------C------AA--------------A--T---G--TC-TGACAA-------G-CACT-AGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTTTCAACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG------CAA-G---TAA-ATCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATAGTTT--T----T-----AAAAACTAACAA---T-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT--GG--GTCGGCGCGGTG----------TT--TAATGTT------AAGTCCACCGCA-A-GTC-CA-----CGCAAATTCG--GGGGG------T-GTTTTCGGCAA----------------------AA----------------------ACAAAAACAAAACTAAA-----CT-AAA--------TAAT------------------CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGAGG-G-ATAGC---AGA-CCTTTGAC-GT---------AAGAGCA---TTGTGC-AATCC--ATGCAAA-TTCGA--AGGGTT--C----CC-CAACAAAAGAAC----TAGAGTCCT-CGA----------------G-GACTTCTAGCGAAAAAA-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TAC-GGCG-A-T----------CAGAAAA-TTGTTCCAATGAACAGAACAG------TTCTCGAT-TTTACAAAA-ACT---------------------GTCAAAACCG-CA-A-TG-GACAATGC--AAA--T-tgagtcggtccgcgaataacg
gi|7 : G-ATAAGAAAAATTGTTCCAATAAACAGAACAG------TTGTCGAC-TTTACAAAT-ACTTA-TGAAAA-AT-T-G-TCA----AAAACCA-CA-ACTG-GACAATGCA-AAA--T-CGACATACGTAC----ACGG--GATTAAAAG-ATCGGACATCGGATTC-AAAAA-------------------------TC----G-T-AAT-GTACAAAAAC-TTCACGT---A-CGATTT--TAGT-ATTTTC-TGTAAatcga
gi|7 : CTTTTCATGTA-CATATAAAATGAGC--TCT-CATAAGTTGGTAAT---TTAAAAA-G---C-T-GG-TAAATATTTGAAA-GT-----CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCATGATAAT-------T-TTT-------GG---GGA-G-----GG-G-------TAAAAA-CCAC-AT--TTCAGGT-GCCTGTG-CTGAAG--ACAGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcatgtacatataaaatgagctctcataagttggtaatttaaaaagctggtaaatatttgaaagtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttcatgataatttttggggaggggtaaaaaccacatttcaggtgcctgtgctgaagacaggcc
gi|8 : gataagaaaaattgttccaataaacagaacagttgtcgactttacaaatacttatgaaaaattgtcaaaaaccacaactggacaatgcaaaatcgacatacgtacacgggattaaaagatcggacatcggattcaaaaatcgtaatgtacaaaaacttcacgtacgattttagtattttctgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-TTCC--TAATC-TTG-GACGTCTAGCAAAAAAG-ATGT-GAA-CAGTA--TT-G-AGT-------TGGCG-AGATAC----CAGA---TG----TACGGGCG-G-TGTTTAAG-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TTATCGA--TTTACAAAATACTTA-TGAAAA-AT-T-G-TCAAGTTAAATCTA-CA-A-TG-GAAAATGCA-AAA--T-CGATATGT-TAC--GAGTGA--TATCAGAAG-ATC-GACGTCGGATTA-AAAAA-----------AA
gi|8 : agtTGTTCAT-----GTA--AAATTAGC-ATCTT-ATA----GGTAATGATTTTAAAA-G---C-TTG-CTAAAAGTAGAAAA-tcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagatgttcatgtaaaattagcatcttataggtaatgattttaaaagcttgctaaaagtagaaaat
gi|9 : agtttcctaatcttggacgtctagcaaaaaagatgtgaacagtattgagttggcgagataccagatgtacgggcggtgtttaagagaagaaaattgttccaataaacagttatcgatttacaaaatacttatgaaaaattgtcaagttaaatctacaatggaaaatgcaaaatcgatatgttacgagtgatatcagaagatcgacgtcggattaaaaaaaatcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagaAG---CCTCAGAT--TCTGCTAATCTGGG--TCATT--CAAATTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATA-GG-TCGGA-GTG-ATAGC---AGACCCTTTGGAGGTG-TTTAAGAAAGAGTA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGGTTCC----CT-CCATAAAAAGA------AGAGTCCCGCGAGTTTCC--TAATCTT-G-GACGTCTAGCAAAAAAATGTGT-TAAGATGTA--TTCG-AGT-------TGGCG-AGATAC----CAGA---TT----TACGGGCA-G-TGTTTAAG-AAAAAAACA-TTCTTTCAAT-----AAACAG------TTCTTGAT-TTTACAAAA-ACTTA-TG-AAATAT-T-G-TCAAGTTAAAACCA-CA-A-TG-GACGATGCA-AAA--T-CAATATAT-TTC--GTGTGA--TATTAAAAG-ATC-GACCTTGGATTA-AAAAAGAACATTTACCAAATCAAACAGTTATGG--GG-TGGGTGGTTCAAAAAC-TCC-AGT---A-CGATTT--TAGT-A--Tt
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): TGTATTACGGGTAATTAGTATTTAGTTACATATGAATTCTCTCTCTTAAAATTATCTGAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 22222222222 11111 666666666666666666666666666666666666666666666666666 5555555555555555555555555555555555555555555555555555555555 999999999999999999999999999999999999999999999999999999999 22222222 1111111 333333333 11111 11111 11111 222222222222 11111 1111111 33333333 5555555555555555555555555555 1111 99999999999999999 3333333333333333 11111 111111111 6666666666666666666666666666666666666666666666666666666 555555555555555 2222222222222 22222222222 555555555555555555 1111111 11111 2222222222222 22222 111111 33333333333 111 11 9999999999999999999999999999999999999999 111 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 111111 11 11111 1 11111 66666666666666 111111111111111 11111111111 11111 333333 111
lowQualScore : 3 33 33333333333 5 11111 5 0 6 777777777777777777777777777777777777777777777777777 0 3 8888888888888888888888888888888888888888888888888888888888 77 3 44 9 55 3 3 55 55 000000000000000000000000000000000000000000000000000000000 4 66666666 3 666 4 55 4 1111111 3 44 3 666 7777 3 55 5 111111111 666 1 4 4 4 00000 4 777 00000 00000 4 66 66 8 0 222222222222 11111 4444444 4 22222222 1 1111111111111111111111111111 77 66 1 3333 4 4 4 66 1 44444444444444444 4 0000000000000000 4 00000 55 777777777 3 8888888888888888888888888888888888888888888888888888888 7777 66 333333333333333 0 8888 4 4 8 4 99 4 4 3 9999999999999 99999999999 777 4 55 4 55 0 2 8888 4 2 99999 55 333333333333333333 2 3 7 3 2 55 444 1111111 1 3 7777 777 11111 1 4444444444444 1 0 4 1 00000 111111 3 4 4 4 4 4 11111111111 4 4 4 4 4 4 4 8 0 222 33 888 5 5 77 5555555555555555555555555555555555555555 33 6 6 111 6 99 6 99 2 0 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 0 5 5 88 8 666666 33 8 11111 5 1 1 66 5 66666 1 77777777777777 888888888888888 44444444444 44 00000 4 222222 4 666 4 5 666
lowQualScore : . .. ........... . ..... . . . ................................................... . . .......................................................... .. . .. . .. . . .. .. ......................................................... . ........ . ... . .. . ....... . .. . ... .... . .. . ......... ... . . . . ..... . ... ..... ..... . .. .. . . ............ ..... ....... . ........ . ............................ .. .. . .... . . . .. . ................. . ................ . ..... .. ......... . ....................................................... .... .. ............... . .... . . . . .. . . . ............. ........... ... . .. . .. . . .... . . ..... .. .................. . . . . . .. ... ....... . . .... ... ..... . ............. . . . . ..... ...... . . . . . . ........... . . . . . . . . . ... .. ... . . .. ........................................ .. . . ... . .. . .. . . ................................................................................................................ . . . .. . ...... .. . ..... . . . .. . ..... . .............. ............... ........... .. ..... . ...... . ... . . ...
lowQualScore : 2 88 88888888888 0 11111 7 1 7 222222222222222222222222222222222222222222222222222 1 3 1111111111111111111111111111111111111111111111111111111111 33 1 22 1 00 6 6 00 00 888888888888888888888888888888888888888888888888888888888 0 00000000 2 444 0 55 0 8888888 6 66 6 444 7777 6 00 8 444444444 333 6 0 0 0 00000 0 000 00000 11111 0 11 11 9 1 888888888888 11111 4444444 4 22222222 0 6666666666666666666666666666 33 11 1 3333 4 4 4 11 1 99999999999999999 4 0000000000000000 0 00000 00 000000000 6 2222222222222222222222222222222222222222222222222222222 9999 11 222222222222222 8 5555 0 0 0 0 55 0 0 2 5555555555555 77777777777 000 0 55 0 55 7 2 5555 0 2 44444 66 444444444444444444 6 6 3 6 3 00 111 8888888 4 3 7777 000 77777 1 3333333333333 6 6 0 6 00000 555555 2 0 0 0 0 0 88888888888 0 0 0 0 0 0 0 0 1 999 66 999 7 7 99 2222222222222222222222222222222222222222 55 7 7 777 7 22 7 22 5 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 8 7 7 11 4 777777 66 4 66666 7 4 7 00 7 88888 4 33333333333333 222222222222222 44444444444 33 00000 0 666666 0 000 0 0 444
consensus : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTN-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGC------TT-GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-ATAT--ACTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTNAA----TCTTCGTCATAA-------T-----T-TTTT--TNGAGG---GGA-G-----GG-GG--T--ATAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
Reference ( family-93 ) : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTN-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGC------TTGGCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GT-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-ATAT-NACTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTCTATTTTNNAANNNNTCTTCGTCATAA-------T-----T-TTTT--TNGAGG---GGA-G-----GG-GG--T--ATAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
gi|1 : AATGTGAAT--TAATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTACCTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTATCT-GATGAAA---------G-------TT-C--CC-----C-------------C------------ACAAAC--ATGT-ATA--CAAATATATG--GTA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---C----AAT-GT--AAATTAATATG---------TGTT--TTCGACACGAT-AG-AATT-CGATAA-----TGCA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----GAATA-------AA-TAA--------AAAAA------C----C-----AACAAC-AACAAAAATATACAT--GTGGTTGATC---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGCAGCTCTTTGGCGTTGT-TTATG-AAAGCACATTCTA-AAATC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAATT---GCTCAGAG--TCCGCTAATCTGGGTAT---C--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAG-TATATT-AGATCGGG-GTG-ATAAC---AGACCCTTTGGTGGTG-TTTAAAAAATAACA---TTGTGA-AATCG--ATACAAA-TTCGA--AGGATTTCC----CC-CAACAAAAGAAC----AAGAGTCCC-CGAG-TTTCG-TAGTCTT-G-GACGTCTAGCAAATAAG-GTGT-GAA-TTGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TTAAAATACGGGCG-G-TGTTTGA-G-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TACTTGAT-TTTACAAAA-ACTTA-TG-AAA-A-TAT-G-TCAAGTTAAAACCA-CA-A-TG-GAGAATG-C---A-GT-CAATATAT-TAC--GAGAGA--GATCAAAAG-ATC-GACGTCGGATTAGAAAAA------------A---AATA---------TTG--GGTT-GGTGATACAAAAAC-TCC-CAT---A-CGATTT--TAGT-A--TTCGTA-TGATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCAT---T-ATAAAAAAT-TAGCAATCTTCATATA-TT-GGTCATA-TTTTAAAATG---C-TTGGTTAAAAGTAGGAAA-ATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAA-------T-----T-TTTT--TAGAAG---GGATG-----GG-GG--TTAATAAAAATCCA-CAC--TTCAGGT-GCTTGTG-CTGAAA--CTAGGCCT
gi|10 : GAATTGAATGAA-----------AACAC-TCCACAAGTGATAAGGA-----TAT-TTAGTGTTTAATTAC-AGATGAG
gi|10 : TATTT-GATGAAA---------G-------TC-C--TC-----C------------------------------AC--ATGT-ATA--CGAATATATG--AGA-G-AAAA--AG--C--------------A-------------TCATTTCAAATTGTT--------------AATC-G--------G-AC---T-G--T--TGACAA-------A-CACTA-GTAT-ATC---C----AAT-GT--AAATTAGAATGCTGGTTT--TTTT--TTC-ACACGAT-AT-AATT-CGATAA-----TACA-TG---TCAGGC-----TCAA-C---TAA-ACCG--CCTT--TT-TAA------------AAAT-----AAA-A-------AA-AAATATTTTTTAAAAA------C----C-----AACAAT-----AAAAC-CACTT--GTGTTTGACT---TCTG-AAAAT-ATAT-TGG--GTCGGC----T-------------CGGTGT-TTATG-AATGCACATTGTA-AAGTC-CA-----CGCATTTTCG--GAGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttgatgaaagtcctccacatgtatacgaatatatgagagaaaaagcatcatttcaaattgttaatcggactgttgacaaacactagtatatccaatgtaaattagaatgctggtttttttttcacacgatataattcgataatacatgtcaggctcaactaaaccgcctttttaaaaataaaaaaaaatattttttaaaaaccaacaataaaaccacttgtgtttgacttctgaaaatatattgggtcggctcggtgtttatgaatgcacattgtaaagtccacgcattttcggagga
gi|11 : gaattgaatgaaaacactccacaagtgataaggatatttagtgtttaattacagatgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaTTTGGATAC----CCGA-AAGA-GG-TG-T--AAA----TGTT-G-------------TA-----------TTTGACGAT----------AGAGCA---TTGTGT-ATTCC--ATGCAAA-ATCGA--AGGGTTCCC----C----ACAAA-GAAC----TAG-------CAA--TCCT--TAA-------GACTTCTAGCAAAAAAG-GTGT-GAA-ATGTA--TT-GGAGT-------CG-TG-AGATAC-----AGA---T------------------------A-AGGAGA---------CCAAT-----GAACAGAACAGTTTCTCGAT-TTTAAAAAA-ACTTA-TG-AAT-A-T-T---T----TCAAAACCAACA-A-TG-GACAGTG-C-AAA-ATTCGATAT---TAG--AAGCGA--CATTAAACG-ATC-GACGTCGGGTT--AAATA------------A---AATC---------TTA--AG---GGTGGTATAAACACTTCC-CAT---ACCGA-AT--TAGTAA--TTAGTGTTAATAa
gi|12 : t-AAAGCACAT-GTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-GTTT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GGGTG-T--AAAA-TATATT-GGATCGGA-G-------------ACCCGTTGGCGTGG-TTTAAGAATCATCA---TTGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CC-C-ACAAAAAAAC----TAGAGTCCC-CGAGTTTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGT-GAA-A-----------AGT-------CGCCG-CGATACCGGTCAGA---TT----tta
gi|13 : gaTAT--AAAGCAC-TTGTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-TATT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GG-TG-T--AAAAATATATTTGGATCGGC-G-----------AGACCCGTTGGCGGTGTTTTAAGAATCATCA----TGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CCACAAGAAAA-AAC----TAGAG-CCC-CGAG-TTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGTCGAA-A-----------AGT-------CGCCGCCGATAC----Caagaga
gi|14 : TGAAGTGAATGAA-----------AGTAC-TTCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-ACACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTAT----------------------------C-T--CT-----C-------------C-------------TACAC--ATGT-ATA--CGAATATATG--GGA-G-AACA--AG--C--------------A-------------T-------------T--------------AATC-A--------GAAC---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---A----AAT-TT--AGATT-ATTTT---------TTTT--TTCGGCACGAT-AA-AAAT-TTATAA-----TACA-TG---TCAGGG-----TCAA-G---TAA-gtcaga
gi|15 : gACTA-------A-CATTT-GTAT-ATC---C----CAT-GT--AAATCGAAATG---------TTTT----CGCCACAGT-AG-AATT-CGATGA-----TAAC-TG---TCACGG-----TCGC-A---TCA-ACCG--CCTA--TT-TGA------------AAATCAAAAAAATA-------AA-TAA--------ACAAA-----------------AACAA--AACAAAA---CACACTAGAGTTTGATA---TCTG-AAAAT-ATAT-TGG--GTTGGCGCGATAGCGGCCCTTTGGCGATGT-CTATG-A
gi|16 : AATGTGAAT--TGATATGAAGTGAAAGAA-----------AGCAC-TCTATATGTGATAAGGA------ATATTAGTATTTAATTAC-AGATGA
gi|16 : ttgacattgtatta--------AAAATTATTT-GATGAAA---------G-------TCAC--AC-----A-------------C------------ACACAC--Aannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttaaaattatttgatgaaagtcacacacacacacac
gi|17 : ttgacattgtattaaatgtgaattgatatgaagtgaaagaaagcactctatatgtgataaggaatattagtatttaattacagatgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttTGTAC-ATTTAAAAAATAGT-ATCTGT-TA-A-GT-GGTAAT--TTT-AAAA-G---C-TTG-CTAAAGGTAG-AAA-ATAT-AACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA--------------AA-------T-----C-TTTT---------------G-----GG-GG--G--ATAAAAATCCA-CAT--TTCAGGT-GCCTGTG-TTGAAA--CCAGGCCTc
gi|18 : A-------T-----TATTTT--TAGAGG---AGG-G-----GG-AGGTT--TTAAAAATCCA-CAC--TTCAGGT-GCCCGT
gi|19 : tcaaaagcttgctaaaagtagaaactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnac---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---C----AAT-GC--AAATTAAAATG---------TTTT--TTCCACCCGAT-AG-AATT-CGAAAA-----TGCA-TG---TCAAAG-----TCAA-C---TAA-ACAG--CTTA--TT-TAG------------AAAT-----AAATA-------AA--AATATTTATTAAAAA------C----C-----AACA------AAAAAC-CACAT--GTGTTTG
gi|2 : ATT-TTT-GATGAAAAGTAGTGCAG-------TT-CTACA-----C-------------A------------ACACACT-ATGT-ATATTCGAATAT-TG--GGA-G-AAAA--AT--C--------------A-------------T-------------TCATTTAAAATCGTTAATC-G--------GAACATTTAG--TC-TG-CAAGACCAATA-TACTATGTATTATC---C----AAT-GTTAAGACTTAAATG---------TTTT---TCGACACGATCAGTAATTCCGATTACGATCTACAGTGGGTCCAGGGCTTCTTCAA-CCTATGATATCGTTCGTA--TTATTA------------AGAT-----ATATAACTTAAGAA-TAA--------AAATATTTTCTT----T-----AA-AGA-AGCAACAAT---CAT--GT-TTTGACTTAGTCTGCAAAATAACCT-TGGTTGTCGGCGCGGTG----------------GT-CTAT----------CTGTACAAGTC-CAGCATGCGCAAATTCG--GGGGG------T-
gi|2 : tcacattataatg--CTGTT-GACTTCACCTCCGACAAGATGGCTG-TT-GAAA-TATATT-GG-TCAGACG-G-GTGACCTTAGACCTTTAGAC-----TT----AAAGACCAGGCTTTTGTCAATCTTAATGCAAT-TTCGATTAGAG-TTCCAGAACC-TATCGAAAGATCAGTATAAAGTCT----AA-CTC----AGTC-C-GAGAGGTCT-----------GTGT---A-ATGTAATTT-G-ATTCCTGCTCCGCCG-AGATAC----C-GATAGTT----TACGGCCATT-TGTTT-A-G-Agtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|2 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattTGTTCATGTACCATATAAAAT-ACGT--TCTTCATA-A-GCAGGTAAT--TTTGAAAA-GGAGCGTTCGCTTAAA-TATGAAG-GTAC-GACTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTCTATTTT--------TCTT-GTCATAA-------T-----A-TCTT--GGGGGG---GGG-GGGGGAGG-GG--G--ATAAAAATCCA-CATTATTCAGGTGGCTTGAG-CTGAAA---CAGGCCTatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|20 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagtAATTATTT-GATGAAA---------G-------TC-A--CA-----CACA----------C------------ACACAC--ATGT-ATA--CGAATAT-TG--GGA-G-AAAA--AG--C--------------A-------------T-------------CATTTCA--------AATC-GTTAATC--GGAC---T-G--TC-TGACAA-------A-TACTA---AA-ATC---CTTAAAAC-AA--AAATTACAATT---------TTTaa
gi|21 : ATGTAATAAGGA-----TAT-TTAGTATTTATTTACAAGATGAGgtacaatatata
gi|21 : ct--------AAAATTATCT-GATGAAA---------GCACCCCTTC-C--CC-----CTCCCCGCACTCTAC------------ACCCAC--ATGT-ATA--CGAATATttctctttcttctttaaaattatctgatgaaagcaccccttccccctccccgcactctacacccacatgtatacgaatattata
gi|22 : ctatgtaataaggatatttagtatttatttacaagatgagttctctttcttcttt---TCTA-AAAAT-ATAT-TGG--GTCGGCGCG-----------------GTTT-TTATG------------TA-A-GTC-CA-----CGCAAATTCG--GAGGG------T-GTCTTCGGCAA----------------------AAGAAAAAAAAAGAAAAACCAACAA-------AAAACTAAAG---GCTCAGAG--TCCGCTAATCTGtata
gi|23 : CG-AGATAC----CAGA---TT----TACGAGCG-G-TGTTT-A-GGAGAAGAAAA-TTGCTA-AAT-----GAACAC------TTTTCGAT-TTTACAAAA--CTT----------------------TCAAAACCA-TA-A-TG-GACAATG-C-AAA-AT-CG
gi|24 : --------AAAATCATCT-GATGAAA---------G-------TC-C--CC-----CACTGATCCACCCAC------------ACACAC--ATCT-GTA--CGAGTATATA--GGA-G-AAAA--AG--C--------------A-------------T-------------C--------------A
gi|25 : tctctctctctctgtt--------AAAATTATTT-GATGAAA-----------------TC-C--CCTCCCTC-------------C------------TCACAC--ATGT-ATA--CGAATATACG--GGA-G-AAAA--AG--C--------------ATCATTTGAAATCGT-------------T--------------AATC-G--------GGAC---tttcaaatcga
gi|26 : tctctctctctctcAATGTGAATGTTGATATGTAGTGAATAAATTTTTTAAAAAGGCATATCCACATGTGATACGGA-----TAT-TTAGTATTT
gi|27 : ttgaacatggtactTCTATATTTTT-------TTTT--TCATAA-------T-----C-TTTTGTTTGGGG---GGA-G-----GG-GG-----ATAAAAATTCA-CAT--TTCAGGT-GCCTTTG-CTGAAA--CCAGGCCTgaatacgaa
gi|28 : -AGAAGAACA-TTGCTACAAT-----AAACAA------TTTCTGAT-ATTACAGAA-ACTTA-TG-AAA-A-A-T-GTTCAAGTTAAAACCA-TACC-TG----AATG-C-AAA-AT-caagac
gi|29 : AAATTATTT-GATGAA----------G-------CC-C--CC-----C-------------CCCCTCCACACACACACAC--ATGT-ATA--CGAATAT
gi|3 : tctccctctctcttcAAATTATTTTGATGAA----------G-------TC-C--AC--------------------------------ACACAC--ATGT-ATA--CGAA-ATTTGTCGCA-G-AAAAGCAATTC--------------A-------------T-------------TTCA-----------AATC-GTCAGATGAGGAC---T-G--TC-GGACAA-------AATACTA-GTAT-ATC---C----AAT-GT--AAATT--AATG---------TTTTTCTTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGT-----AAAA-C---TAA-GTCG--CCTATTTT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATA------T----TTTTTAAAAAACTAAC--AATT-CACAT--GTG--TGATT---TCTG-AAAAT-ATAT-TGG--GTCGGC----T------------GCGGTGT-TTATGTAAAG------------GTC-CA-----AGCAAATTCG--GATGG------T-GTTTTCCGCAA----------------------AA----------------------A-------A
gi|3 : tctctctctccctctcG---ACTCAGAG--TCCGCTAATCTGG------------------TTGACATC----CAGA-AAGA-GG-TG-TCCAATA-TATATT-TGATCATA-G-GGATACC---AGACC-TTTGACA-CG-T------AAGAGCA---GTGTGT-AATCC--ATGCAAAATTCGA--AGGGT--CC----CC-CAACAAAAGAAC-----AGAGTCCC-CGA--------------------------GCA-----G-GTGTTGAA-ATGTA--TT-G-AG--------CGGCG-AGATAC----CAGA---TT----TACGGCCG-T-TAT---------------A-TTGTTCCAAT-----GAATTG------TG-TCGAT-TTTACAAAA-TCTTAGTG-AAA-A-T-TTG-T----TCAAAACCA-CA-A-TG-GTCAATG-CCAAA-AT-TGATCT---TACC-GAGCGG--GATTAAAATTATC-GGTGCCGGATT--ACAAA------------A---A------------TCGAAGG---AGTG-TACAAAAAC-TGC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAAcccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|3 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCATGTAC-ATATAAAAT-TAGT-TTC-TCATA-A-GT--GTAAT--TTTTAAAA-A---C-TT-GCTAAAAGTAGAAAAGATAT-TA--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAATCTTTTTT-----T-TTTT--TTGAGG---GGG-G-----GG---------TAAAAATCCACCAT--TTCAGGT-GCCTGTGTCTGAAACCCCAGGCCTattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|30 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattaAATG---AT--TAATATGAAGTGAATGAA-----------AACAC-TCCACGT---ATAAGAACAAGTTAT-TTCGTA-TTATTTAC-AGA
gi|31 : g-------T-----T-TTTT--TGGAGGAGGGGA-A-----GG-GG--TTTACAAAAATCCA-CAC--TTCTGGT-GCCTG
gi|33 : tttatattattttttT--TAGAAA---GGA-G-----GGAGG-------GGAAATCCA-TAC--TTCAGGT-GCATGTG-
gi|34 : GCAAATTCG--GAGGG------TGTTTTCCGGAAA----------------------AA----------------------A-------AGAAata
gi|35 : TGAA-TCAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAagaaaaaaaac
gi|36 : agATGAAGTAAATGAA-----------AACAC-TCCAC--GTGATAAGAA-----CA
gi|4 : -------------C------------ACACAC--ATGTTATA--C-AATAT-TG--GGAAG-AAAA--AG--CCATCATTTCAAATCG-------------T-------------T--------------AATCCG--------GGAC---T-GCTTC-TGACAA-------A-TACTA-GTGT-ATTGGGC----AATTGT--AAAT--AAATGGGTATTTTATTTT--TT--------T-TG-AATT-CGATAA-----TA-A-TC---TCAG-------TCAAAC---TAA--TCG--CCTA--ATATTA------------AAAT-----AAATA-------AAATAA--------AAATA------TGTTTT-----AA-AA--AACTAACAT-CACAG--GT-TTGGAT---------GAAAT-ATATCTGG--GTCGGCGCG-CAG-------------GTATGTTATG-TAA-----------AAGTCACA------ACAAA--CGAAGAGGG------TGTTTTTCCGCAACCAAAAAAAAACCAAAAACAAAAA----------------------A-------AGAAACAAAACAAAC-CAAAGACTCCGCTAA-------------------CTGTT-GACTTC----CCGA-A-GA-GG-TGCT--AAAA-TATATT-G-ATTAGA-G---ATACC---AG-CCCTT-----GAG-TC----GAAGAGCA---TGATGT-AATCC--ATGCAAA-TT-GA--AGG----TC----CC-CAA-AAAAGAAC----TAGAGTTCC-C----------------------CG--------AGGAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATA-----CAGA---T----------GCG-GCCGTT------------AAA-TTGTT-CAAT-----GA--TG------TTC-CGATCTTTACAAAT-ACTTA-TG-AAA-A-T-T-------GTCAAAACCA-CA-A-TGCGACAATGCC-AAA-ATACGA-ATAT-TACGAGAGCGGGCAATTAAAAG-ATC-GACGTC-GATT--CAAAA------------ATGTAA----------------GG-T-----GTACAAAAAC-TTC-CGTTGGA-CGATTTAGTTGT-A--TTag
gi|4 : aTTCATGT-AATGTAC-ATATAAA---TAGT-TTCT-CATA-ATGC-GTTAAT--TTTTAAAG-C---C-TTTGCT-AAAGTA-GAAA-ATAT--ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAA-------TCTTTCT-TTTT--T------------G-----GG-GG--T---------------------------GCCTGTG-CTGGAAACCCAGGCCTtattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|5 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattTCT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACACATATGT-ATA--CG--TATATG--GAA-GAAAAA--AG--C--------------A-------------TAATTTC-------T--------------AATC-G--------TTA------A--TCAGGATAT-------A-CACTT-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACAAC-AG------------------ACA-TG---TCAGGT-----TCAA-T---TAA-ACCG--TCTA--TT-TGAACATATATAGATAAAT-----AAATA-------AA-TAA--------AAAAA-----------C-----AACAAA-AACCACAAT---CAT--GTGTTTGATA---GTTG-AAAAT-ATAT-TTG--ATCTAGGCAACAGCAGTCCTTTGGCAGTGT-TTGTG--AAGCACTTTGTA-AAGTA-CA-----CGAAAATTCA--GAAGGTTTGTTT-TTTTTTGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGTTCATCTGGGTTT---T--CA--GTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCAGA-GCG-ATAGC---AGACCCTTTGGCGGCG-TTTAAGAAAGTGTA---TCATGT-AATCC--ATGCAAA-TTCGA--AGGGTTT-T----CC-CGACAAAAGAAC----TAGAGTCCA-AGAG-TTCCCTTAGCT-A-T-GACTTCTAGCAAAGAAG-GTGT-GAA-ATGTA--T------T-------CGGCG-ATATc
gi|6 : GT-ACA--CGAATATTTG--GGA-G-AAAA--AG--T--------------T-------------T-------------C--------------AA--------------A----T-G--TC-TGACAA-------G-CACTA-GTAT-ATC---C----AAT-GT--AAATTAAAATGTT-------TTTT--TTCAACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG------CAA-G---TAA-ATCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATAGTTT--T----T-----AAAAACTAAC---AAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATA--TGG--GTCGGCGCGGT-GT------TT---AATGT-T------AAGTCCACCGC--AAGTC-CA-----CGCAAATTCG--GGGGG------T-GTTTTCGGCAA----------------------AA----------------------ACAAAAACAAAACTAAA-----CT-AAA--------TAAT------------------CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGAGG-G-ATAGC---AGA-CCTTTGAC-GT---------AAGAGCA---TTGTGC-AATCC--ATGCAAA-TTCGA--AGGGTT--C----CC-CAACAAAAGAAC----TAGAGTCCT-CGA----------------G-GACTTCTAGCGAAAAAA-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TAC-GGCG-A-T-----------CAGAAAA-TTGTTCCAATGAACAGAACAG------TTCTCGAT-TTTACAAAA-ACT----------------------GTCAAAACCG-CA-A-TG-GACAATG-C-AAATAT-CGAtgagtcggtccgcgaataacg
gi|7 : -G-ATAAGAAAAATTGTTCCAATAAACAGAACAG------TTGTCGAC-TTTACAAAT-ACTTA-TGAAAA-A-T-T-G-TCA----AAAACCA-CA-ACTG-GACAATG-C-AAA-AT-CGACATACGTAC----ACGG--GATTAAAAG-ATCGGACATCGGATT--CAAAA------------A----------------TC----G-T-AAT-GTACAAAAAC-TTCACGT---A-CGATTT--TAGT-ATTTTC-TG-TAA
gi|7 : CTTTTCATGTAC-ATATAAAAT-GAGC--TCT-CATA-A-GTTGGTAAT--TTA-AAAA-G---C-T-GG-TAAATATTTGAAA-GT-----CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCATGATAA-------T-----T-TTT-------GG---GGA-G-----GG-G-------TAAAAA-CCA-CAT--TTCAGGT-GCCTGTG-CTGAAG--ACAGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcatgtacatataaaatgagctctcataagttggtaatttaaaaagctggtaaatatttgaaagtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttcatgataatttttggggaggggtaaaaaccacatttcaggtgcctgtgctgaagacaggcc
gi|8 : gataagaaaaattgttccaataaacagaacagttgtcgactttacaaatacttatgaaaaattgtcaaaaaccacaactggacaatgcaaaatcgacatacgtacacgggattaaaagatcggacatcggattcaaaaatcgtaatgtacaaaaacttcacgtacgattttagtattttctgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-TTCC--TAATC-TTG-GACGTCTAGCAAAAAAG-ATGT-GAA-CAGTA--TT-G-AGT-------TGGCG-AGATAC----CAGA---TG----TACGGGCG-G-TGTTT-AAG-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TTATCGAT-TT-ACAAAATACTTA-TG-AAA-AAT-T-G-TCAAGTTAAATCTA-CA-A-TG-GAAAATG-C-AAA-AT-CGATATGT-TAC--GAGTGA--TATCAGAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------
gi|8 : agtATGTTC-ATGTAAAAT-TAGC-ATCTT-ATA------GGTAATGATTTTAAAA-G---C-TT-GCTAAAAGTAGAAAA-cttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagatgttcatgtaaaattagcatcttataggtaatgattttaaaagcttgctaaaagtagaaaat
gi|9 : agtttcctaatcttggacgtctagcaaaaaagatgtgaacagtattgagttggcgagataccagatgtacgggcggtgtttaagagaagaaaattgttccaataaacagttatcgatttacaaaatacttatgaaaaattgtcaagttaaatctacaatggaaaatgcaaaatcgatatgttacgagtgatatcagaagatcgacgtcggattaaaaaaaatcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagAG---CCTCAGAT--TCTGCTAATCTGGG--TCATT--CAAATTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATA-GG-TCGGA-GTG-ATAGC---AGACCCTTTGGAGGTG-TTTAAGAAAGAGTA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGGTTCC----CT-CCATAAAAAGA------AGAGTCCCGCGAGTTTCC--TAATCTT-G-GACGTCTAGCAAAAAAATGTGT-TAAGATGTA--TTCG-AGT-------TGGCG-AGATAC----CAGA---TT----TACGGGCA-G-TGTTTAA-G-AAAAAAACA-TTCTTTCAAT-----AAACAG------TTCTTGAT-TTTACAAAA-ACTTA-TG-AAATA-T-T-G-TCAAGTTAAAACCA-CA-A-TG-GACGATG-C-AAA-AT-CAATATAT-TTC--GTGTGA--TATTAAAAG-ATC-GACCTTGGATT--AAAAAAGAACATTTACCA---AATCAAACAGTTATGG--GG-TGGGTGGTTCAAAAAC-TCC-AGT---A-CGATTT--TAGT-A--Tt
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): TGTATTACGGGTAATTAGTATTTAGTTACATATGAATTCTCTCTCTTAAAATTATCTGAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 22222222222 11111 666666666666666666666666666666666666666666666666666 5555555555555555555555555555555555555555555555555555555555 999999999999999999999999999999999999999999999999999999999 22222222 1111111 333333333 11111 11111 11111 222222222222 11111 1111111 33333333 5555555555555555555555555555 1111 99999999999999999 3333333333333333 11111 111111111 6666666666666666666666666666666666666666666666666666666 555555555555555 2222222222222 22222222222 555555555555555555 1111111 11111 2222222222222 22222 111111 33333333333 11 9999999999999999999999999999999999999999 111 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 222222 11 11111 1 44444444 4444444444 1111111 1111 11111 333333333 111
lowQualScore : 3 33 33333333333 5 11111 5 0 6 777777777777777777777777777777777777777777777777777 0 3 8888888888888888888888888888888888888888888888888888888888 77 3 44 9 55 3 3 55 55 000000000000000000000000000000000000000000000000000000000 4 66666666 3 666 4 55 4 1111111 3 44 3 666 7777 3 55 5 111111111 666 1 4 4 4 00000 4 777 00000 00000 4 66 66 8 0 222222222222 11111 4444444 4 22222222 1 1111111111111111111111111111 77 66 1 3333 4 4 4 66 1 88888888888888888 4 0000000000000000 4 00000 55 777777777 3 8888888888888888888888888888888888888888888888888888888 7777 66 333333333333333 0 8888 4 4 8 4 99 4 4 3 9999999999999 99999999999 777 4 55 4 55 0 2 8888 4 2 99999 55 333333333333333333 2 3 7 3 2 55 444 1111111 1 3 7777 777 11111 1 4444444444444 1 0 4 1 00000 111111 3 4 4 4 4 4 11111111111 4 4 4 4 4 4 4 4 4 3 0 5 33 888 5 5 77 5555555555555555555555555555555555555555 33 6 6 111 6 99 6 99 2 0 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 0 5 5 88 8 000000 33 8 11111 5 1 1 66 5 6 00000000 1 2222222222 6666666 5 2222 777 4 11111 222222222 4 66 4 5 666
lowQualScore : . .. ........... . ..... . . . ................................................... . . .......................................................... .. . .. . .. . . .. .. ......................................................... . ........ . ... . .. . ....... . .. . ... .... . .. . ......... ... . . . . ..... . ... ..... ..... . .. .. . . ............ ..... ....... . ........ . ............................ .. .. . .... . . . .. . ................. . ................ . ..... .. ......... . ....................................................... .... .. ............... . .... . . . . .. . . . ............. ........... ... . .. . .. . . .... . . ..... .. .................. . . . . . .. ... ....... . . .... ... ..... . ............. . . . . ..... ...... . . . . . . ........... . . . . . . . . . . . . .. ... . . .. ........................................ .. . . ... . .. . .. . . ................................................................................................................ . . . .. . ...... .. . ..... . . . .. . . ........ . .......... ....... . .... ... . ..... ......... . .. . . ...
lowQualScore : 2 88 88888888888 0 11111 7 1 7 222222222222222222222222222222222222222222222222222 1 3 1111111111111111111111111111111111111111111111111111111111 33 1 22 1 00 6 6 00 00 888888888888888888888888888888888888888888888888888888888 0 00000000 2 444 0 55 0 8888888 6 66 6 444 7777 6 00 8 444444444 333 6 0 0 0 00000 0 000 00000 11111 0 11 11 9 1 888888888888 11111 4444444 4 22222222 0 6666666666666666666666666666 33 11 1 3333 4 4 4 11 1 88888888888888888 4 0000000000000000 0 00000 00 000000000 6 2222222222222222222222222222222222222222222222222222222 9999 11 222222222222222 8 5555 0 0 0 0 55 0 0 2 5555555555555 77777777777 000 0 55 0 55 7 2 5555 0 2 44444 66 444444444444444444 6 6 3 6 3 00 111 8888888 4 3 7777 000 77777 1 3333333333333 6 6 0 6 00000 555555 2 0 0 0 0 0 88888888888 0 0 0 0 0 0 0 0 0 6 1 7 66 999 7 7 99 2222222222222222222222222222222222222222 55 7 7 777 7 22 7 22 5 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 8 7 7 11 4 777777 66 4 66666 7 4 7 00 7 7 22222222 0 5555555555 2222222 0 0000 888 4 11111 999999999 4 11 0 0 444
consensus : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTN-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAG-----CTT--GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACC-ACA-A-TG-GACAATG-C-AAA-A-T-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT-AT------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTNAATCTT-GTCATAA-------TT-TTTT--TNGAGG---GGA-G-----GG-GG-----ATAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
Reference ( family-93 ) : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTN-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAG-----CTT--GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACC-ACA-A-TG-GACAATG-C-AAA-A-T-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT-AT------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTNAATCTTCGTCATAA-------TT-TTTT--TNGAGG---GGA-G-----GG-GG--T--ATAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
gi|1 : AATGTGAAT--TAATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTACCTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTATCT-GATGAAA---------G-------TT-C--CC-----C-------------C------------ACAAAC--ATGT-ATA--CAAATATATG--GTA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---C----AAT-GT--AAATTAATATG---------TGTT--TTCGACACGAT-AG-AATT-CGATAA-----TGCA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----GAATA-------AA-TAA--------AAAAA------C----C-----AACAAC-AACAAAAATATACAT--GTGGTTGATC---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGCAGCTCTTTGGCGTTGT-TTATG-AAAGCACATTCTA-AAATC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAATT---GCTCAGAG--TCCGCTAATCTGGGTAT---C--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAG-TATATT-AGATCGGG-GTG-ATAAC---AGACCCTTTGGTGGTG-TTTAAAAAATAACA---TTGTGA-AATCG--ATACAAA-TTCGA--AGGATTTCC----CC-CAACAAAAGAAC----AAGAGTCCC-CGAG-TTTCG-TAGTCTT-G-GACGTCTAGCAAATAAG-GTGT-GAA-TTGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TTAAAATACGGGCG-G-TGTTTGA-G-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TACTTGAT-TTTACAAAA-ACTTA-TG-AAA-A-TAT-G-TCAAGTTAAAACC-ACA-A-TG-GAGAATG-C---A-G-T-CAATATAT-TAC--GAGAGA--GATCAAAAG-ATC-GACGTCGGATTAGAAAAA------------A---AATA---------TTG--GGTT-GGTGATACAAAAAC-TCC-CAT---A-CGATTT--TAGT-A--TTCGTA-TGATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCAT---T-ATAAAAAAT-TAGCAATCTTCATATA-TT-GGTCATA-TTTTAAAATG---C-TTGGTTAAAAGTAGGAAA-AT-ATNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAA-------TT-TTTT--TAGAAG---GGATG-----GG-GG--TTAATAAAAATCCA-CAC--TTCAGGT-GCTTGTG-CTGAAA--CTAGGCCT
gi|10 : GAATTGAATGAA-----------AACAC-TCCACAAGTGATAAGGA-----TAT-TTAGTGTTTAATTAC-AGATGAG
gi|10 : TATTT-GATGAAA---------G-------TC-C--TC-----C------------------------------AC--ATGT-ATA--CGAATATATG--AGA-G-AAAA--AG--C--------------A-------------TCATTTCAAATTGTT--------------AATC-G--------G-AC---T-G--T--TGACAA-------A-CACTA-GTAT-ATC---C----AAT-GT--AAATTAGAATGCTGGTTT--TTTT--TTC-ACACGAT-AT-AATT-CGATAA-----TACA-TG---TCAGGC-----TCAA-C---TAA-ACCG--CCTT--TT-TAA------------AAAT-----AAA-A-------AA-AAATATTTTTTAAAAA------C----C-----AACAAT-----AAAAC-CACTT--GTGTTTGACT---TCTG-AAAAT-ATAT-TGG--GTCGGC----T-------------CGGTGT-TTATG-AATGCACATTGTA-AAGTC-CA-----CGCATTTTCG--GAGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttgatgaaagtcctccacatgtatacgaatatatgagagaaaaagcatcatttcaaattgttaatcggactgttgacaaacactagtatatccaatgtaaattagaatgctggtttttttttcacacgatataattcgataatacatgtcaggctcaactaaaccgcctttttaaaaataaaaaaaaatattttttaaaaaccaacaataaaaccacttgtgtttgacttctgaaaatatattgggtcggctcggtgtttatgaatgcacattgtaaagtccacgcattttcggagga
gi|11 : gaattgaatgaaaacactccacaagtgataaggatatttagtgtttaattacagatgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaTTTGGATAC----CCGA-AAGA-GG-TG-T--AAA----TGTT-G-------------TA-----------TTTGACGAT----------AGAGCA---TTGTGT-ATTCC--ATGCAAA-ATCGA--AGGGTTCCC----C----ACAAA-GAAC----TAG-------CAA--TCCT--TAA-------GACTTCTAGCAAAAAAG-GTGT-GAA-ATGTA--TT-GGAGT-------CG-TG-AGATAC-----AGA---T------------------------A-AGGAGA---------CCAAT-----GAACAGAACAGTTTCTCGAT-TTTAAAAAA-ACTTA-TG-AAT-A-T-T---T----TCAAAACCAACA-A-TG-GACAGTG-C-AAA-ATT-CG--ATAT-TAG--AAGCGA--CATTAAACG-ATC-GACGTCGGGTT--AAATA------------A---AATC---------TTA--AG---GGTGGTATAAACACTTCC-CAT---ACCGA-AT--TAGTAA--TTAGTGTTAATAa
gi|12 : t-AAAGCACAT-GTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-GTTT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GGGTG-T--AAAA-TATATT-GGATCGGA-G-------------ACCCGTTGGCGTGG-TTTAAGAATCATCA---TTGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CC-C-ACAAAAAAAC----TAGAGTCCC-CGAGTTTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGT-GAA-A-----------AGT-------CGCCG-CGATACCGGTCAGA---TT----tta
gi|13 : gaTAT--AAAGCAC-TTGTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-TATT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GG-TG-T--AAAAATATATTTGGATCGGC-G-----------AGACCCGTTGGCGGTGTTTTAAGAATCATCA----TGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CCACAAGAAAA-AAC----TAGAG-CCC-CGAG-TTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGTCGAA-A-----------AGT-------CGCCGCCGATAC----Caagaga
gi|14 : TGAAGTGAATGAA-----------AGTAC-TTCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-ACACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTAT----------------------------C-T--CT-----C-------------C-------------TACAC--ATGT-ATA--CGAATATATG--GGA-G-AACA--AG--C--------------A-------------T-------------T--------------AATC-A--------GAAC---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---A----AAT-TT--AGATT-ATTTT---------TTTT--TTCGGCACGAT-AA-AAAT-TTATAA-----TACA-TG---TCAGGG-----TCAA-G---TAA-gtcaga
gi|15 : gACTA-------A-CATTT-GTAT-ATC---C----CAT-GT--AAATCGAAATG---------TTTT----CGCCACAGT-AG-AATT-CGATGA-----TAAC-TG---TCACGG-----TCGC-A---TCA-ACCG--CCTA--TT-TGA------------AAATCAAAAAAATA-------AA-TAA--------ACAAA-----------------AACAA--AACAAAA---CACACTAGAGTTTGATA---TCTG-AAAAT-ATAT-TGG--GTTGGCGCGATAGCGGCCCTTTGGCGATGT-CTATG-A
gi|16 : AATGTGAAT--TGATATGAAGTGAAAGAA-----------AGCAC-TCTATATGTGATAAGGA------ATATTAGTATTTAATTAC-AGATGA
gi|16 : ttgacattgtatta--------AAAATTATTT-GATGAAA---------G-------TCAC--AC-----A-------------C------------ACACAC--Aannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttaaaattatttgatgaaagtcacacacacacacac
gi|17 : ttgacattgtattaaatgtgaattgatatgaagtgaaagaaagcactctatatgtgataaggaatattagtatttaattacagatgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttTGTAC-ATTTAAAAAATAGT-ATCTGT-TA-A-GT-GGTAAT--TTT-AAAA-G---C-TTG-CTAAAGGTAG-AAA-AT-AT------AACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA----------AA-------TC-TTTT---------------G-----GG-GG--G--ATAAAAATCCA-CAT--TTCAGGT-GCCTGTG-TTGAAA--CCAGGCCTc
gi|18 : A-------TTATTTT--TAGAGG---AGG-G-----GG-AGGTT--TTAAAAATCCA-CAC--TTCAGGT-GCCCGT
gi|19 : tcaaaagcttgctaaaagtagaaactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnac---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---C----AAT-GC--AAATTAAAATG---------TTTT--TTCCACCCGAT-AG-AATT-CGAAAA-----TGCA-TG---TCAAAG-----TCAA-C---TAA-ACAG--CTTA--TT-TAG------------AAAT-----AAATA-------AA--AATATTTATTAAAAA------C----C-----AACA------AAAAAC-CACAT--GTGTTTG
gi|2 : ATT-TTT-GATGAAAAGTAGTGCAG-------TT-CTACA-----C-------------A------------ACACACT-ATGT-ATATTCGAATAT-TG--GGA-G-AAAA--AT--C--------------A-------------T-------------TCATTTAAAATCGTTAATC-G--------GAACATTTAG--TC-TG-CAAGACCAATA-TACTATGTATTATC---C----AAT-GTTAAGACTTAAATG---------TTTT---TCGACACGATCAGTAATTCCGATTACGATCTACAGTGGGTCCAGGGCTTCTTCAA-CCTATGATATCGTTCGTA--TTATTA------------AGAT-----ATATAACTTAAGAA-TAA--------AAATATTTTCTT----T-----AA-AGA-AGCAACAAT---CAT--GT-TTTGACTTAGTCTGCAAAATAACCT-TGGTTGTCGGCGCGGTG----------------GT-CTAT----------CTGTACAAGTC-CAGCATGCGCAAATTCG--GGGGG------T-
gi|2 : tcacattataatg--CTGTT-GACTTCACCTCCGACAAGATGGCTG-TT-GAAA-TATATT-GG-TCAGACG-G-GTGACCTTAGACCTTTAGAC-----TT----AAAGACCAGGCTTTTGTCAATCTTAATGCAAT-TTCGATTAGAG-TTCCAGAACC-TATCGAAAGATCAGTATAAAGTCT----AA-CTC----AGTC-C-GAGAGGTCT-----------GTGT---A-ATGTAATTT-G-ATTCCTGCTCCGCCG-AGATAC----C-GATAGTT----TACGGCCATT-TGTTT-A-G-Agtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|2 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattTGTTCATGTACCATATAAAAT-ACGT--TCTTCATA-A-GCAGGTAAT--TTTGAAAA-GGAGCGTTCGCTTAAA-TATGAAG-GT-ACG-----A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTCTATTTT----TCTT-GTCATAA-------TA-TCTT--GGGGGG---GGG-GGGGGAGG-GG--G--ATAAAAATCCA-CATTATTCAGGTGGCTTGAG-CTGAAA---CAGGCCTatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|20 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagtAATTATTT-GATGAAA---------G-------TC-A--CA-----CACA----------C------------ACACAC--ATGT-ATA--CGAATAT-TG--GGA-G-AAAA--AG--C--------------A-------------T-------------CATTTCA--------AATC-GTTAATC--GGAC---T-G--TC-TGACAA-------A-TACTA---AA-ATC---CTTAAAAC-AA--AAATTACAATT---------TTTaa
gi|21 : ATGTAATAAGGA-----TAT-TTAGTATTTATTTACAAGATGAGgtacaatatata
gi|21 : ct--------AAAATTATCT-GATGAAA---------GCACCCCTTC-C--CC-----CTCCCCGCACTCTAC------------ACCCAC--ATGT-ATA--CGAATATttctctttcttctttaaaattatctgatgaaagcaccccttccccctccccgcactctacacccacatgtatacgaatattata
gi|22 : ctatgtaataaggatatttagtatttatttacaagatgagttctctttcttcttt---TCTA-AAAAT-ATAT-TGG--GTCGGCGCG-----------------GTTT-TTATG------------TA-A-GTC-CA-----CGCAAATTCG--GAGGG------T-GTCTTCGGCAA----------------------AAGAAAAAAAAAGAAAAACCAACAA-------AAAACTAAAG---GCTCAGAG--TCCGCTAATCTGtata
gi|23 : CG-AGATAC----CAGA---TT----TACGAGCG-G-TGTTT-A-GGAGAAGAAAA-TTGCTA-AAT-----GAACAC------TTTTCGAT-TTTACAAAA--CTT----------------------TCAAAACC-ATA-A-TG-GACAATG-C-AAA-A-T-CG
gi|24 : --------AAAATCATCT-GATGAAA---------G-------TC-C--CC-----CACTGATCCACCCAC------------ACACAC--ATCT-GTA--CGAGTATATA--GGA-G-AAAA--AG--C--------------A-------------T-------------C--------------A
gi|25 : tctctctctctctgtt--------AAAATTATTT-GATGAAA-----------------TC-C--CCTCCCTC-------------C------------TCACAC--ATGT-ATA--CGAATATACG--GGA-G-AAAA--AG--C--------------ATCATTTGAAATCGT-------------T--------------AATC-G--------GGAC---tttcaaatcga
gi|26 : tctctctctctctcAATGTGAATGTTGATATGTAGTGAATAAATTTTTTAAAAAGGCATATCCACATGTGATACGGA-----TAT-TTAGTATTT
gi|27 : ttgaacatggtactTCTATATTTTT---TTTT--TCATAA-------TC-TTTTGTTTGGGG---GGA-G-----GG-GG-----ATAAAAATTCA-CAT--TTCAGGT-GCCTTTG-CTGAAA--CCAGGCCTgaatacgaa
gi|28 : -AGAAGAACA-TTGCTACAAT-----AAACAA------TTTCTGAT-ATTACAGAA-ACTTA-TG-AAA-A-A-T-GTTCAAGTTAAAACC-ATACC-TG----AATG-C-AAA-A-T-caagac
gi|29 : AAATTATTT-GATGAA----------G-------CC-C--CC-----C-------------CCCCTCCACACACACACAC--ATGT-ATA--CGAATAT
gi|3 : tctccctctctcttcAAATTATTTTGATGAA----------G-------TC-C--AC--------------------------------ACACAC--ATGT-ATA--CGAA-ATTTGTCGCA-G-AAAAGCAATTC--------------A-------------T-------------TTCA-----------AATC-GTCAGATGAGGAC---T-G--TC-GGACAA-------AATACTA-GTAT-ATC---C----AAT-GT--AAATT--AATG---------TTTTTCTTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGT-----AAAA-C---TAA-GTCG--CCTATTTT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATA------T----TTTTTAAAAAACTAAC--AATT-CACAT--GTG--TGATT---TCTG-AAAAT-ATAT-TGG--GTCGGC--------------T--GCGGTGT-TTATGTAAAG------------GTC-CA-----AGCAAATTCG--GATGG------T-GTTTTCCGCAA----------------------AA----------------------A-------A
gi|3 : tctctctctccctctcG---ACTCAGAG--TCCGCTAATCTGG------------------TTGACATC----CAGA-AAGA-GG-TG-TCCAATA-TATATT-TGATCATA-G-GGATACC---AGACC-TTTGACA-CG-T------AAGAGCA---GTGTGT-AATCC--ATGCAAAATTCGA--AGGGT--CC----CC-CAACAAAAGAAC-----AGAGTCCC-CGA--------------------------GCA-----G-GTGTTGAA-ATGTA--TT-G-AG--------CGGCG-AGATAC----CAGA---TT----TACGGCCG-T-TAT---------------A-TTGTTCCAAT-----GAATTG------TG-TCGAT-TTTACAAAA-TCTTAGTG-AAA-A-T-TTG-T----TCAAAACC-ACA-A-TG-GTCAATG-CCAAA-A-T-TGATCT---TACC-GAGCGG--GATTAAAATTATC-GGTGCCGGATT--ACAAA------------A---A------------TCGAAGG---AGTG-TACAAAAAC-TGC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAAcccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|3 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCATGTAC-ATATAAAAT-TAGT-TTC-TCATA-A-GT--GTAAT--TTTTAAAA-A---C-TT-GCTAAAAGTAGAAAAGAT-ATTAN---N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAATCTTTTTTT-TTTT--TTGAGG---GGG-G-----GG---------TAAAAATCCACCAT--TTCAGGT-GCCTGTGTCTGAAACCCCAGGCCTattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|30 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattaAATG---AT--TAATATGAAGTGAATGAA-----------AACAC-TCCACGT---ATAAGAACAAGTTAT-TTCGTA-TTATTTAC-AGA
gi|31 : g-------TT-TTTT--TGGAGGAGGGGA-A-----GG-GG--TTTACAAAAATCCA-CAC--TTCTGGT-GCCTG
gi|33 : tttatattattttttT--TAGAAA---GGA-G-----GGAGG-------GGAAATCCA-TAC--TTCAGGT-GCATGTG-
gi|34 : GCAAATTCG--GAGGG------TGTTTTCCGGAAA----------------------AA----------------------A-------AGAAata
gi|35 : TGAA-TCAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAagaaaaaaaac
gi|36 : agATGAAGTAAATGAA-----------AACAC-TCCAC--GTGATAAGAA-----CA
gi|4 : -------------C------------ACACAC--ATGTTATA--C-AATAT-TG--GGAAG-AAAA--AG--CCATCATTTCAAATCG-------------T-------------T--------------AATCCG--------GGAC---T-GCTTC-TGACAA-------A-TACTA-GTGT-ATTGGGC----AATTGT--AAAT--AAATGGGTATTTTATTTT--TT--------T-TG-AATT-CGATAA-----TA-A-TC---TCAG-------TCAAAC---TAA--TCG--CCTA--ATATTA------------AAAT-----AAATA-------AAATAA--------AAATA------TGTTTT-----AA-AA--AACTAACAT-CACAG--GT-TTGGAT---------GAAAT-ATATCTGG--GTCGGCGCG-CAG-------------GTATGTTATG-TAA-----------AAGTCACA------ACAAA--CGAAGAGGG------TGTTTTTCCGCAACCAAAAAAAAACCAAAAACAAAAA----------------------A-------AGAAACAAAACAAAC-CAAAGACTCCGCTAA-------------------CTGTT-GACTTC----CCGA-A-GA-GG-TGCT--AAAA-TATATT-G-ATTAGA-G---ATACC---AG-CCCTT-----GAG-TC----GAAGAGCA---TGATGT-AATCC--ATGCAAA-TT-GA--AGG----TC----CC-CAA-AAAAGAAC----TAGAGTTCC-C----------------------CG--------AGGAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATA-----CAGA---T----------GCG-GCCGTT------------AAA-TTGTT-CAAT-----GA--TG------TTC-CGATCTTTACAAAT-ACTTA-TG-AAA-A-T-T-------GTCAAAACC-ACA-A-TGCGACAATGCC-AAA-A-TACGA-ATAT-TACGAGAGCGGGCAATTAAAAG-ATC-GACGTC-GATT--CAAAA------------ATGTAA----------------GG-T-----GTACAAAAAC-TTC-CGTTGGA-CGATTTAGTTGT-A--TTag
gi|4 : aTTCATGT-AATGTAC-ATATAAA---TAGT-TTCT-CATA-ATGC-GTTAAT--TTTTAAAG-C---C-TTTGCT-AAAGTA-GAAA-AT-AT------A-tattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|4 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattGGT-GCCTGTG-CTGGAAACCCAGGCCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|5 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggTCT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACACATATGT-ATA--CG--TATATG--GAA-GAAAAA--AG--C--------------A-------------TAATTTC-------T--------------AATC-G--------TTA------A--TCAGGATAT-------A-CACTT-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACAAC-AG------------------ACA-TG---TCAGGT-----TCAA-T---TAA-ACCG--TCTA--TT-TGAACATATATAGATAAAT-----AAATA-------AA-TAA--------AAAAA-----------C-----AACAAA-AACCACAAT---CAT--GTGTTTGATA---GTTG-AAAAT-ATAT-TTG--ATCTAGGCAACAGCAGTCCTTTGGCAGTGT-TTGTG--AAGCACTTTGTA-AAGTA-CA-----CGAAAATTCA--GAAGGTTTGTTT-TTTTTTGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGTTCATCTGGGTTT---T--CA--GTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCAGA-GCG-ATAGC---AGACCCTTTGGCGGCG-TTTAAGAAAGTGTA---TCATGT-AATCC--ATGCAAA-TTCGA--AGGGTTT-T----CC-CGACAAAAGAAC----TAGAGTCCA-AGAG-TTCCCTTAGCT-A-T-GACTTCTAGCAAAGAAG-GTGT-GAA-ATGTA--T------T-------CGGCG-ATATc
gi|6 : GT-ACA--CGAATATTTG--GGA-G-AAAA--AG--T--------------T-------------T-------------C--------------AA--------------A----T-G--TC-TGACAA-------G-CACTA-GTAT-ATC---C----AAT-GT--AAATTAAAATGTT-------TTTT--TTCAACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG------CAA-G---TAA-ATCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATAGTTT--T----T-----AAAAACTAAC---AAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATA--TGG--GTCGGCGCGGT-G-----TTT----AATGT-T------AAGTCCACCGC--AAGTC-CA-----CGCAAATTCG--GGGGG------T-GTTTTCGGCAA----------------------AA----------------------ACAAAAACAAAACTAAA-----CT-AAA--------TAAT------------------CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGAGG-G-ATAGC---AGA-CCTTTGAC-GT---------AAGAGCA---TTGTGC-AATCC--ATGCAAA-TTCGA--AGGGTT--C----CC-CAACAAAAGAAC----TAGAGTCCT-CGA----------------G-GACTTCTAGCGAAAAAA-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TAC-GGCG-A-T-----------CAGAAAA-TTGTTCCAATGAACAGAACAG------TTCTCGAT-TTTACAAAA-ACT----------------------GTCAAAACC-GCA-A-TG-GACAATG-C-AAATA-T-CGAtgagtcggtccgcgaataacg
gi|7 : -G-ATAAGAAAAATTGTTCCAATAAACAGAACAG------TTGTCGAC-TTTACAAAT-ACTTA-TGAAAA-A-T-T-G-TCA----AAAACC-ACA-ACTG-GACAATG-C-AAA-A-T-CGACATACGTAC----ACGG--GATTAAAAG-ATCGGACATCGGATT--CAAAA------------A----------------TC----G-T-AAT-GTACAAAAAC-TTCACGT---A-CGATTT--TAGT-ATTTTC-TG-TAA
gi|7 : CTTTTCATGTAC-ATATAAAAT-GAGC--TCT-CATA-A-GTTGGTAAT--TTA-AAAA-G---C-T-GG-TAAATATTTGAAA-GTCNN------N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCATGATAA-------TT-TTT-------GG---GGA-G-----GG-G-------TAAAAA-CCA-CAT--TTCAGGT-GCCTGTG-CTGAAG--ACAGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcatgtacatataaaatgagctctcataagttggtaatttaaaaagctggtaaatatttgaaagtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttcatgataatttttggggaggggtaaaaaccacatttcaggtgcctgtgctgaagacaggcc
gi|8 : gataagaaaaattgttccaataaacagaacagttgtcgactttacaaatacttatgaaaaattgtcaaaaaccacaactggacaatgcaaaatcgacatacgtacacgggattaaaagatcggacatcggattcaaaaatcgtaatgtacaaaaacttcacgtacgattttagtattttctgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-TTCC--TAATC-TTG-GACGTCTAGCAAAAAAG-ATGT-GAA-CAGTA--TT-G-AGT-------TGGCG-AGATAC----CAGA---TG----TACGGGCG-G-TGTTT-AAG-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TTATCGAT-TT-ACAAAATACTTA-TG-AAA-AAT-T-G-TCAAGTTAAATCT-ACA-A-TG-GAAAATG-C-AAA-A-T-CGATATGT-TAC--GAGTGA--TATCAGAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------
gi|8 : agtATGTTC-ATGTAAAAT-TAGC-ATCTT-ATA------GGTAATGATTTTAAAA-G---C-TT-GCTAAAAGTAGAAAA-cttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagatgttcatgtaaaattagcatcttataggtaatgattttaaaagcttgctaaaagtagaaaat
gi|9 : agtttcctaatcttggacgtctagcaaaaaagatgtgaacagtattgagttggcgagataccagatgtacgggcggtgtttaagagaagaaaattgttccaataaacagttatcgatttacaaaatacttatgaaaaattgtcaagttaaatctacaatggaaaatgcaaaatcgatatgttacgagtgatatcagaagatcgacgtcggattaaaaaaaatcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagAG---CCTCAGAT--TCTGCTAATCTGGG--TCATT--CAAATTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATA-GG-TCGGA-GTG-ATAGC---AGACCCTTTGGAGGTG-TTTAAGAAAGAGTA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGGTTCC----CT-CCATAAAAAGA------AGAGTCCCGCGAGTTTCC--TAATCTT-G-GACGTCTAGCAAAAAAATGTGT-TAAGATGTA--TTCG-AGT-------TGGCG-AGATAC----CAGA---TT----TACGGGCA-G-TGTTTAA-G-AAAAAAACA-TTCTTTCAAT-----AAACAG------TTCTTGAT-TTTACAAAA-ACTTA-TG-AAATA-T-T-G-TCAAGTTAAAACC-ACA-A-TG-GACGATG-C-AAA-A-T-CAATATAT-TTC--GTGTGA--TATTAAAAG-ATC-GACCTTGGATT--AAAAAAGAACATTTACCA---AATCAAACAGTTATGG--GG-TGGGTGGTTCAAAAAC-TCC-AGT---A-CGATTT--TAGT-A--Tt
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): TGTATTACGGGTAATTAGTATTTAGTTACATATGAATTCTCTCTCTTAAAATTATCTGAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 22222222222 11111 666666666666666666666666666666666666666666666666666 5555555555555555555555555555555555555555555555555555555555 999999999999999999999999999999999999999999999999999999999 22222222 1111111 333333333 11111 11111 11111 222222222222 11111 1111111 33333333 5555555555555555555555555555 1111 99999999999999999 3333333333333333 11111 111111111 6666666666666666666666666666666666666666666666666666666 555555555555555 2222222222222 22222222222 555555555555555555 1111111 11111 2222222222222 22222 111111 33333333333 111 11 9999999999999999999999999999999999999999 111 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 222222 11 11111 1 444444444 3333333333 1111111 333333333 222222222 111
lowQualScore : 3 33 33333333333 5 11111 5 0 6 777777777777777777777777777777777777777777777777777 0 3 8888888888888888888888888888888888888888888888888888888888 77 3 44 9 55 3 3 55 55 000000000000000000000000000000000000000000000000000000000 4 66666666 3 666 4 55 4 1111111 3 44 3 666 7777 3 55 5 111111111 666 1 4 4 4 00000 4 777 00000 00000 4 66 66 8 0 222222222222 11111 4444444 4 22222222 1 1111111111111111111111111111 77 66 1 3333 4 4 4 66 1 88888888888888888 4 0000000000000000 4 00000 55 777777777 3 8888888888888888888888888888888888888888888888888888888 7777 66 333333333333333 0 8888 4 4 8 4 99 4 4 3 9999999999999 99999999999 777 4 55 4 55 0 2 8888 4 2 99999 55 333333333333333333 2 3 7 3 2 55 444 1111111 1 3 7777 777 11111 1 4444444444444 1 0 4 1 00000 111111 3 4 4 4 4 4 11111111111 4 4 4 4 4 4 4 8 0 222 33 888 5 5 77 5555555555555555555555555555555555555555 33 6 6 111 6 99 6 99 2 0 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 0 5 5 88 8 000000 33 8 11111 5 1 1 66 5 6 555555555 1 7777777777 6666666 000000000 777 4 333333333 4 66 4 5 666
lowQualScore : . .. ........... . ..... . . . ................................................... . . .......................................................... .. . .. . .. . . .. .. ......................................................... . ........ . ... . .. . ....... . .. . ... .... . .. . ......... ... . . . . ..... . ... ..... ..... . .. .. . . ............ ..... ....... . ........ . ............................ .. .. . .... . . . .. . ................. . ................ . ..... .. ......... . ....................................................... .... .. ............... . .... . . . . .. . . . ............. ........... ... . .. . .. . . .... . . ..... .. .................. . . . . . .. ... ....... . . .... ... ..... . ............. . . . . ..... ...... . . . . . . ........... . . . . . . . . . ... .. ... . . .. ........................................ .. . . ... . .. . .. . . ................................................................................................................ . . . .. . ...... .. . ..... . . . .. . . ......... . .......... ....... ......... ... . ......... . .. . . ...
lowQualScore : 2 88 88888888888 0 11111 7 1 7 222222222222222222222222222222222222222222222222222 1 3 1111111111111111111111111111111111111111111111111111111111 33 1 22 1 00 6 6 00 00 888888888888888888888888888888888888888888888888888888888 0 00000000 2 444 0 55 0 8888888 6 66 6 444 7777 6 00 8 444444444 333 6 0 0 0 00000 0 000 00000 11111 0 11 11 9 1 888888888888 11111 4444444 4 22222222 0 6666666666666666666666666666 33 11 1 3333 4 4 4 11 1 88888888888888888 4 0000000000000000 0 00000 00 000000000 6 2222222222222222222222222222222222222222222222222222222 9999 11 222222222222222 8 5555 0 0 0 0 55 0 0 2 5555555555555 77777777777 000 0 55 0 55 7 2 5555 0 2 44444 66 444444444444444444 6 6 3 6 3 00 111 8888888 4 3 7777 000 77777 1 3333333333333 6 6 0 6 00000 555555 2 0 0 0 0 0 88888888888 0 0 0 0 0 0 0 0 1 999 66 999 7 7 99 2222222222222222222222222222222222222222 55 7 7 777 7 22 7 22 5 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 8 7 7 11 4 777777 66 4 66666 7 4 7 00 7 7 222222222 0 8888888888 2222222 999999999 888 4 777777777 4 11 0 0 444
consensus : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTN-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAG-----CTT--GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT-AT-------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTTAATCTT-NTCATAA-------TTTTTT------T-GAGG---GGA-GGGGG---A-----TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
Reference ( family-93 ) : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTN-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAG-----CTT--GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT-AT-------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTNAATCTT-GTCATAA-------TTTTTT------TNGAGG---GGA-GGGGG---A-----TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
gi|1 : AATGTGAAT--TAATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTACCTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTATCT-GATGAAA---------G-------TT-C--CC-----C-------------C------------ACAAAC--ATGT-ATA--CAAATATATG--GTA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---C----AAT-GT--AAATTAATATG---------TGTT--TTCGACACGAT-AG-AATT-CGATAA-----TGCA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----GAATA-------AA-TAA--------AAAAA------C----C-----AACAAC-AACAAAAATATACAT--GTGGTTGATC---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGCAGCTCTTTGGCGTTGT-TTATG-AAAGCACATTCTA-AAATC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAATT---GCTCAGAG--TCCGCTAATCTGGGTAT---C--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAG-TATATT-AGATCGGG-GTG-ATAAC---AGACCCTTTGGTGGTG-TTTAAAAAATAACA---TTGTGA-AATCG--ATACAAA-TTCGA--AGGATTTCC----CC-CAACAAAAGAAC----AAGAGTCCC-CGAG-TTTCG-TAGTCTT-G-GACGTCTAGCAAATAAG-GTGT-GAA-TTGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TTAAAATACGGGCG-G-TGTTTGA-G-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TACTTGAT-TTTACAAAA-ACTTA-TG-AAA-A-TAT-G-TCAAGTTAAAACCA-CA-A-TG-GAGAATG-C---A-GT-CAATATAT-TAC--GAGAGA--GATCAAAAG-ATC-GACGTCGGATTAGAAAAA------------A---AATA---------TTG--GGTT-GGTGATACAAAAAC-TCC-CAT---A-CGATTT--TAGT-A--TTCGTA-TGATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCAT---T-ATAAAAAAT-TAGCAATCTTCATATA-TT-GGTCATA-TTTTAAAATG---C-TTGGTTAAAAGTAGGAAA-AT-ATNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNCATAA-------TTTTTT------TAGAAG---GGATGGGGGTTAA-----TAAAAATCCA-CAC--TTCAGGT-GCTTGTG-CTGAAA--CTAGGCCT
gi|10 : GAATTGAATGAA-----------AACAC-TCCACAAGTGATAAGGA-----TAT-TTAGTGTTTAATTAC-AGATGAG
gi|10 : TATTT-GATGAAA---------G-------TC-C--TC-----C------------------------------AC--ATGT-ATA--CGAATATATG--AGA-G-AAAA--AG--C--------------A-------------TCATTTCAAATTGTT--------------AATC-G--------G-AC---T-G--T--TGACAA-------A-CACTA-GTAT-ATC---C----AAT-GT--AAATTAGAATGCTGGTTT--TTTT--TTC-ACACGAT-AT-AATT-CGATAA-----TACA-TG---TCAGGC-----TCAA-C---TAA-ACCG--CCTT--TT-TAA------------AAAT-----AAA-A-------AA-AAATATTTTTTAAAAA------C----C-----AACAAT-----AAAAC-CACTT--GTGTTTGACT---TCTG-AAAAT-ATAT-TGG--GTCGGC----T-------------CGGTGT-TTATG-AATGCACATTGTA-AAGTC-CA-----CGCATTTTCG--GAGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttgatgaaagtcctccacatgtatacgaatatatgagagaaaaagcatcatttcaaattgttaatcggactgttgacaaacactagtatatccaatgtaaattagaatgctggtttttttttcacacgatataattcgataatacatgtcaggctcaactaaaccgcctttttaaaaataaaaaaaaatattttttaaaaaccaacaataaaaccacttgtgtttgacttctgaaaatatattgggtcggctcggtgtttatgaatgcacattgtaaagtccacgcattttcggagga
gi|11 : gaattgaatgaaaacactccacaagtgataaggatatttagtgtttaattacagatgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaTTTGGATAC----CCGA-AAGA-GG-TG-T--AAA----TGTT-G-------------TA-----------TTTGACGAT----------AGAGCA---TTGTGT-ATTCC--ATGCAAA-ATCGA--AGGGTTCCC----C----ACAAA-GAAC----TAG-------CAA--TCCT--TAA-------GACTTCTAGCAAAAAAG-GTGT-GAA-ATGTA--TT-GGAGT-------CG-TG-AGATAC-----AGA---T------------------------A-AGGAGA---------CCAAT-----GAACAGAACAGTTTCTCGAT-TTTAAAAAA-ACTTA-TG-AAT-A-T-T---T----TCAAAACCAACA-A-TG-GACAGTG-C-AAA-ATTCGATAT---TAG--AAGCGA--CATTAAACG-ATC-GACGTCGGGTT--AAATA------------A---AATC---------TTA--AG---GGTGGTATAAACACTTCC-CAT---ACCGA-AT--TAGTAA--TTAGTGTTAATAa
gi|12 : t-AAAGCACAT-GTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-GTTT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GGGTG-T--AAAA-TATATT-GGATCGGA-G-------------ACCCGTTGGCGTGG-TTTAAGAATCATCA---TTGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CC-C-ACAAAAAAAC----TAGAGTCCC-CGAGTTTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGT-GAA-A-----------AGT-------CGCCG-CGATACCGGTCAGA---TT----tta
gi|13 : gaTAT--AAAGCAC-TTGTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-TATT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GG-TG-T--AAAAATATATTTGGATCGGC-G-----------AGACCCGTTGGCGGTGTTTTAAGAATCATCA----TGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CCACAAGAAAA-AAC----TAGAG-CCC-CGAG-TTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGTCGAA-A-----------AGT-------CGCCGCCGATAC----Caagaga
gi|14 : TGAAGTGAATGAA-----------AGTAC-TTCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-ACACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTAT----------------------------C-T--CT-----C-------------C-------------TACAC--ATGT-ATA--CGAATATATG--GGA-G-AACA--AG--C--------------A-------------T-------------T--------------AATC-A--------GAAC---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---A----AAT-TT--AGATT-ATTTT---------TTTT--TTCGGCACGAT-AA-AAAT-TTATAA-----TACA-TG---TCAGGG-----TCAA-G---TAA-gtcaga
gi|15 : gACTA-------A-CATTT-GTAT-ATC---C----CAT-GT--AAATCGAAATG---------TTTT----CGCCACAGT-AG-AATT-CGATGA-----TAAC-TG---TCACGG-----TCGC-A---TCA-ACCG--CCTA--TT-TGA------------AAATCAAAAAAATA-------AA-TAA--------ACAAA-----------------AACAA--AACAAAA---CACACTAGAGTTTGATA---TCTG-AAAAT-ATAT-TGG--GTTGGCGCGATAGCGGCCCTTTGGCGATGT-CTATG-A
gi|16 : AATGTGAAT--TGATATGAAGTGAAAGAA-----------AGCAC-TCTATATGTGATAAGGA------ATATTAGTATTTAATTAC-AGATGA
gi|16 : ttgacattgtatta--------AAAATTATTT-GATGAAA---------G-------TCAC--AC-----A-------------C------------ACACAC--Aannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttaaaattatttgatgaaagtcacacacacacacac
gi|17 : ttgacattgtattaaatgtgaattgatatgaagtgaaagaaagcactctatatgtgataaggaatattagtatttaattacagatgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttTGTAC-ATTTAAAAAATAGT-ATCTGT-TA-A-GT-GGTAAT--TTT-AAAA-G---C-TTG-CTAAAGGTAG-AAA-AT-AT-------AACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA----------AA-------TCTTTT-----------------G-GGGGG---A-----TAAAAATCCA-CAT--TTCAGGT-GCCTGTG-TTGAAA--CCAGGCCTc
gi|18 : CATTA-------TTTTT----------AGA---GGA-GGGGG---AGGTTTTAAAAATCCA-CAC--TTCAGGT-GCCCGT
gi|19 : tcaaaagcttgctaaaagtagaaactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnna---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---C----AAT-GC--AAATTAAAATG---------TTTT--TTCCACCCGAT-AG-AATT-CGAAAA-----TGCA-TG---TCAAAG-----TCAA-C---TAA-ACAG--CTTA--TT-TAG------------AAAT-----AAATA-------AA--AATATTTATTAAAAA------C----C-----AACA------AAAAAC-CACAT--GTGTTTG
gi|2 : ATT-TTT-GATGAAAAGTAGTGCAG-------TT-CTACA-----C-------------A------------ACACACT-ATGT-ATATTCGAATAT-TG--GGA-G-AAAA--AT--C--------------A-------------T-------------TCATTTAAAATCGTTAATC-G--------GAACATTTAG--TC-TG-CAAGACCAATA-TACTATGTATTATC---C----AAT-GTTAAGACTTAAATG---------TTTT---TCGACACGATCAGTAATTCCGATTACGATCTACAGTGGGTCCAGGGCTTCTTCAA-CCTATGATATCGTTCGTA--TTATTA------------AGAT-----ATATAACTTAAGAA-TAA--------AAATATTTTCTT----T-----AA-AGA-AGCAACAAT---CAT--GT-TTTGACTTAGTCTGCAAAATAACCT-TGGTTGTCGGCGCGGTG----------------GT-CTAT----------CTGTACAAGTC-CAGCATGCGCAAATTCG--GGGGG------T-
gi|2 : tcacattataatg--CTGTT-GACTTCACCTCCGACAAGATGGCTG-TT-GAAA-TATATT-GG-TCAGACG-G-GTGACCTTAGACCTTTAGAC-----TT----AAAGACCAGGCTTTTGTCAATCTTAATGCAAT-TTCGATTAGAG-TTCCAGAACC-TATCGAAAGATCAGTATAAAGTCT----AA-CTC----AGTC-C-GAGAGGTCT-----------GTGT---A-ATGTAATTT-G-ATTCCTGCTCCGCCG-AGATAC----C-GATAGTT----TACGGCCATT-TGTTT-A-G-Agtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|2 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattTGTTCATGTACCATATAAAAT-ACGT--TCTTCATA-A-GCAGGTAAT--TTTGAAAA-GGAGCGTTCGCTTAAA-TATGAAG-GT-ACG------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTCTATTTT----TCTT-GTCATAA-------TATCTTGGGGGGGGGGGG---GGA-GGGGG---A-----TAAAAATCCA-CATTATTCAGGTGGCTTGAG-CTGAAA---CAGGCCTatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|20 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagtAATTATTT-GATGAAA---------G-------TC-A--CA-----CACA----------C------------ACACAC--ATGT-ATA--CGAATAT-TG--GGA-G-AAAA--AG--C--------------A-------------T-------------CATTTCA--------AATC-GTTAATC--GGAC---T-G--TC-TGACAA-------A-TACTA---AA-ATC---CTTAAAAC-AA--AAATTACAATT---------TTTaa
gi|21 : ATGTAATAAGGA-----TAT-TTAGTATTTATTTACAAGATGAGgtacaatatata
gi|21 : ct--------AAAATTATCT-GATGAAA---------GCACCCCTTC-C--CC-----CTCCCCGCACTCTAC------------ACCCAC--ATGT-ATA--CGAATATttctctttcttctttaaaattatctgatgaaagcaccccttccccctccccgcactctacacccacatgtatacgaatattata
gi|22 : ctatgtaataaggatatttagtatttatttacaagatgagttctctttcttcttt---TCTA-AAAAT-ATAT-TGG--GTCGGCGCG-----------------GTTT-TTATG------------TA-A-GTC-CA-----CGCAAATTCG--GAGGG------T-GTCTTCGGCAA----------------------AAGAAAAAAAAAGAAAAACCAACAA-------AAAACTAAAG---GCTCAGAG--TCCGCTAATCTGtata
gi|23 : CG-AGATAC----CAGA---TT----TACGAGCG-G-TGTTT-A-GGAGAAGAAAA-TTGCTA-AAT-----GAACAC------TTTTCGAT-TTTACAAAA--CTT----------------------TCAAAACCA-TA-A-TG-GACAATG-C-AAA-AT-CG
gi|24 : --------AAAATCATCT-GATGAAA---------G-------TC-C--CC-----CACTGATCCACCCAC------------ACACAC--ATCT-GTA--CGAGTATATA--GGA-G-AAAA--AG--C--------------A-------------T-------------C--------------A
gi|25 : tctctctctctctgtt--------AAAATTATTT-GATGAAA-----------------TC-C--CCTCCCTC-------------C------------TCACAC--ATGT-ATA--CGAATATACG--GGA-G-AAAA--AG--C--------------ATCATTTGAAATCGT-------------T--------------AATC-G--------GGAC---tttcaaatcga
gi|26 : tctctctctctctcAATGTGAATGTTGATATGTAGTGAATAAATTTTTTAAAAAGGCATATCCACATGTGATACGGA-----TAT-TTAGTATTT
gi|27 : ttgaacatggtactTCTATATTTTTT----TT-TTCATAA-------TCTTTTGT----TTGGGG---GGA-GGGGG---A-----TAAAAATTCA-CAT--TTCAGGT-GCCTTTG-CTGAAA--CCAGGCCTgaatacgaa
gi|28 : -AGAAGAACA-TTGCTACAAT-----AAACAA------TTTCTGAT-ATTACAGAA-ACTTA-TG-AAA-A-A-T-GTTCAAGTTAAAACCA-TACC-TG----AATG-C-AAA-AT-caagac
gi|29 : AAATTATTT-GATGAA----------G-------CC-C--CC-----C-------------CCCCTCCACACACACACAC--ATGT-ATA--CGAATAT
gi|3 : tctccctctctcttcAAATTATTTTGATGAA----------G-------TC-C--AC--------------------------------ACACAC--ATGT-ATA--CGAA-ATTTGTCGCA-G-AAAAGCAATTC--------------A-------------T-------------TTCA-----------AATC-GTCAGATGAGGAC---T-G--TC-GGACAA-------AATACTA-GTAT-ATC---C----AAT-GT--AAATT--AATG---------TTTTTCTTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGT-----AAAA-C---TAA-GTCG--CCTATTTT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATA------T----TTTTTAAAAAACTAAC--AATT-CACAT--GTG--TGATT---TCTG-AAAAT-ATAT-TGG--GTCGGC--------------T--GCGGTGT-TTATGTAAAG------------GTC-CA-----AGCAAATTCG--GATGG------T-GTTTTCCGCAA----------------------AA----------------------A-------A
gi|3 : tctctctctccctctcG---ACTCAGAG--TCCGCTAATCTGG------------------TTGACATC----CAGA-AAGA-GG-TG-TCCAATA-TATATT-TGATCATA-G-GGATACC---AGACC-TTTGACA-CG-T------AAGAGCA---GTGTGT-AATCC--ATGCAAAATTCGA--AGGGT--CC----CC-CAACAAAAGAAC-----AGAGTCCC-CGA--------------------------GCA-----G-GTGTTGAA-ATGTA--TT-G-AG--------CGGCG-AGATAC----CAGA---TT----TACGGCCG-T-TAT---------------A-TTGTTCCAAT-----GAATTG------TG-TCGAT-TTTACAAAA-TCTTAGTG-AAA-A-T-TTG-T----TCAAAACCA-CA-A-TG-GTCAATG-CCAAA-AT-TGATCT---TACC-GAGCGG--GATTAAAATTATC-GGTGCCGGATT--ACAAA------------A---A------------TCGAAGG---AGTG-TACAAAAAC-TGC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAAcccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|3 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCATGTAC-ATATAAAAT-TAGT-TTC-TCATA-A-GT--GTAAT--TTTTAAAA-A---C-TT-GCTAAAAGTAGAAAAGAT-ATTANN---N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNCATAATCTTTTTTTTTTT------TTGAGG-------GGGGG---G-----TAAAAATCCACCAT--TTCAGGT-GCCTGTGTCTGAAACCCCAGGCCTattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|30 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattaAATG---AT--TAATATGAAGTGAATGAA-----------AACAC-TCCACGT---ATAAGAACAAGTTAT-TTCGTA-TTATTTAC-AGA
gi|31 : g-------TTTTTT------TGGAGGAGGGGA-AGGGGTTTA-----CAAAAATCCA-CAC--TTCTGGT-GCCTG
gi|33 : tttatattattttttT------TAGAAA---GGA-GGGAG---G------GGAAATCCA-TAC--TTCAGGT-GCATGTG-
gi|34 : GCAAATTCG--GAGGG------TGTTTTCCGGAAA----------------------AA----------------------A-------AGAAata
gi|35 : TGAA-TCAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAagaaaaaaaac
gi|36 : agATGAAGTAAATGAA-----------AACAC-TCCAC--GTGATAAGAA-----CA
gi|4 : -------------C------------ACACAC--ATGTTATA--C-AATAT-TG--GGAAG-AAAA--AG--CCATCATTTCAAATCG-------------T-------------T--------------AATCCG--------GGAC---T-GCTTC-TGACAA-------A-TACTA-GTGT-ATTGGGC----AATTGT--AAAT--AAATGGGTATTTTATTTT--TT--------T-TG-AATT-CGATAA-----TA-A-TC---TCAG-------TCAAAC---TAA--TCG--CCTA--ATATTA------------AAAT-----AAATA-------AAATAA--------AAATA------TGTTTT-----AA-AA--AACTAACAT-CACAG--GT-TTGGAT---------GAAAT-ATATCTGG--GTCGGCGCG-CAG-------------GTATGTTATG-TAA-----------AAGTCACA------ACAAA--CGAAGAGGG------TGTTTTTCCGCAACCAAAAAAAAACCAAAAACAAAAA----------------------A-------AGAAACAAAACAAAC-CAAAGACTCCGCTAA-------------------CTGTT-GACTTC----CCGA-A-GA-GG-TGCT--AAAA-TATATT-G-ATTAGA-G---ATACC---AG-CCCTT-----GAG-TC----GAAGAGCA---TGATGT-AATCC--ATGCAAA-TT-GA--AGG----TC----CC-CAA-AAAAGAAC----TAGAGTTCC-C----------------------CG--------AGGAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATA-----CAGA---T----------GCG-GCCGTT------------AAA-TTGTT-CAAT-----GA--TG------TTC-CGATCTTTACAAAT-ACTTA-TG-AAA-A-T-T-------GTCAAAACCA-CA-A-TGCGACAATGCC-AAA-ATACGA-ATAT-TACGAGAGCGGGCAATTAAAAG-ATC-GACGTC-GATT--CAAAA------------ATGTAA----------------GG-T-----GTACAAAAAC-TTC-CGTTGGA-CGATTTAGTTGT-A--TTag
gi|4 : aTTCATGT-AATGTAC-ATATAAA---TAGT-TTCT-CATA-ATGC-GTTAAT--TTTTAAAG-C---C-TTTGCT-AAAGTA-GAAA-AT-AT-------A-tattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|4 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattGGT-GCCTGTG-CTGGAAACCCAGGCCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|5 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggTCT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACACATATGT-ATA--CG--TATATG--GAA-GAAAAA--AG--C--------------A-------------TAATTTC-------T--------------AATC-G--------TTA------A--TCAGGATAT-------A-CACTT-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACAAC-AG------------------ACA-TG---TCAGGT-----TCAA-T---TAA-ACCG--TCTA--TT-TGAACATATATAGATAAAT-----AAATA-------AA-TAA--------AAAAA-----------C-----AACAAA-AACCACAAT---CAT--GTGTTTGATA---GTTG-AAAAT-ATAT-TTG--ATCTAGGCAACAGCAGTCCTTTGGCAGTGT-TTGTG--AAGCACTTTGTA-AAGTA-CA-----CGAAAATTCA--GAAGGTTTGTTT-TTTTTTGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGTTCATCTGGGTTT---T--CA--GTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCAGA-GCG-ATAGC---AGACCCTTTGGCGGCG-TTTAAGAAAGTGTA---TCATGT-AATCC--ATGCAAA-TTCGA--AGGGTTT-T----CC-CGACAAAAGAAC----TAGAGTCCA-AGAG-TTCCCTTAGCT-A-T-GACTTCTAGCAAAGAAG-GTGT-GAA-ATGTA--T------T-------CGGCG-ATATc
gi|6 : GT-ACA--CGAATATTTG--GGA-G-AAAA--AG--T--------------T-------------T-------------C--------------AA--------------A----T-G--TC-TGACAA-------G-CACTA-GTAT-ATC---C----AAT-GT--AAATTAAAATGTT-------TTTT--TTCAACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG------CAA-G---TAA-ATCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATAGTTT--T----T-----AAAAACTAAC---AAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATA--TGG--GTCGGCGCGGT-G-----TTT----AATGT-T------AAGTCCACCGC--AAGTC-CA-----CGCAAATTCG--GGGGG------T-GTTTTCGGCAA----------------------AA----------------------ACAAAAACAAAACTAAA-----CT-AAA--------TAAT------------------CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGAGG-G-ATAGC---AGA-CCTTTGAC-GT---------AAGAGCA---TTGTGC-AATCC--ATGCAAA-TTCGA--AGGGTT--C----CC-CAACAAAAGAAC----TAGAGTCCT-CGA----------------G-GACTTCTAGCGAAAAAA-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TAC-GGCG-A-T-----------CAGAAAA-TTGTTCCAATGAACAGAACAG------TTCTCGAT-TTTACAAAA-ACT----------------------GTCAAAACCG-CA-A-TG-GACAATG-C-AAATAT-CGAtgagtcggtccgcgaataacg
gi|7 : -G-ATAAGAAAAATTGTTCCAATAAACAGAACAG------TTGTCGAC-TTTACAAAT-ACTTA-TGAAAA-A-T-T-G-TCA----AAAACCA-CA-ACTG-GACAATG-C-AAA-AT-CGACATACGTAC----ACGG--GATTAAAAG-ATCGGACATCGGATT--CAAAA------------A----------------TC----G-T-AAT-GTACAAAAAC-TTCACGT---A-CGATTT--TAGT-ATTTTC-TG-TAA
gi|7 : CTTTTCATGTAC-ATATAAAAT-GAGC--TCT-CATA-A-GTTGGTAAT--TTA-AAAA-G---C-T-GG-TAAATATTTGAAA-GTCNN-------N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCATGATAA-------TTTTT-----------GG---GGA-GGGG----------TAAAAA-CCA-CAT--TTCAGGT-GCCTGTG-CTGAAG--ACAGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcatgtacatataaaatgagctctcataagttggtaatttaaaaagctggtaaatatttgaaagtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttcatgataatttttggggaggggtaaaaaccacatttcaggtgcctgtgctgaagacaggcc
gi|8 : gataagaaaaattgttccaataaacagaacagttgtcgactttacaaatacttatgaaaaattgtcaaaaaccacaactggacaatgcaaaatcgacatacgtacacgggattaaaagatcggacatcggattcaaaaatcgtaatgtacaaaaacttcacgtacgattttagtattttctgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-TTCC--TAATC-TTG-GACGTCTAGCAAAAAAG-ATGT-GAA-CAGTA--TT-G-AGT-------TGGCG-AGATAC----CAGA---TG----TACGGGCG-G-TGTTT-AAG-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TTATCGAT-TT-ACAAAATACTTA-TG-AAA-AAT-T-G-TCAAGTTAAATCTA-CA-A-TG-GAAAATG-C-AAA-AT-CGATATGT-TAC--GAGTGA--TATCAGAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------
gi|8 : agtATGTTC-ATGTAAAAT-TAGC-ATCTT-ATA------GGTAATGATTTTAAAA-G---C-TT-GCTAAAAGTAGAAAA-cttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagatgttcatgtaaaattagcatcttataggtaatgattttaaaagcttgctaaaagtagaaaat
gi|9 : agtttcctaatcttggacgtctagcaaaaaagatgtgaacagtattgagttggcgagataccagatgtacgggcggtgtttaagagaagaaaattgttccaataaacagttatcgatttacaaaatacttatgaaaaattgtcaagttaaatctacaatggaaaatgcaaaatcgatatgttacgagtgatatcagaagatcgacgtcggattaaaaaaaatcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagAG---CCTCAGAT--TCTGCTAATCTGGG--TCATT--CAAATTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATA-GG-TCGGA-GTG-ATAGC---AGACCCTTTGGAGGTG-TTTAAGAAAGAGTA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGGTTCC----CT-CCATAAAAAGA------AGAGTCCCGCGAGTTTCC--TAATCTT-G-GACGTCTAGCAAAAAAATGTGT-TAAGATGTA--TTCG-AGT-------TGGCG-AGATAC----CAGA---TT----TACGGGCA-G-TGTTTAA-G-AAAAAAACA-TTCTTTCAAT-----AAACAG------TTCTTGAT-TTTACAAAA-ACTTA-TG-AAATA-T-T-G-TCAAGTTAAAACCA-CA-A-TG-GACGATG-C-AAA-AT-CAATATAT-TTC--GTGTGA--TATTAAAAG-ATC-GACCTTGGATT--AAAAAAGAACATTTACCA---AATCAAACAGTTATGG--GG-TGGGTGGTTCAAAAAC-TCC-AGT---A-CGATTT--TAGT-A--Tt
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): TGTATTACGGGTAATTAGTATTTAGTTACATATGAATTCTCTCTCTTAAAATTATCTGAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 22222222222 11111 666666666666666666666666666666666666666666666666666 5555555555555555555555555555555555555555555555555555555555 99999999999999999999999999999999999999999999999999 22222222 1111111 333333333 11111 11111 11111 222222222222 11111 1111111 33333333 5555555555555555555555555555 1111 99999999999999999 3333333333333333 11111 111111111 6666666666666666666666666666666666666666666666666666666 555555555555555 2222222222222 22222222222 555555555555555555 1111111 11111 2222222222222 22222 111111 33333333333 111 11 9999999999999999999999999999999999999999 111 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 222222 11 11111 1 444444444 3333333333 11111111 444444444444444 2222222222 111
lowQualScore : 3 33 33333333333 5 11111 5 0 6 777777777777777777777777777777777777777777777777777 0 3 8888888888888888888888888888888888888888888888888888888888 77 3 44 9 55 3 3 55 55 00000000000000000000000000000000000000000000000000 4 66666666 3 3 777 55 4 1111111 3 44 3 666 7777 3 55 5 111111111 55 1 4 4 4 00000 4 777 00000 00000 4 66 66 8 0 222222222222 11111 4444444 4 22222222 1 1111111111111111111111111111 77 66 1 3333 4 4 4 66 1 88888888888888888 4 0000000000000000 4 00000 55 777777777 3 8888888888888888888888888888888888888888888888888888888 7777 66 333333333333333 0 8888 4 4 8 4 99 4 4 3 9999999999999 99999999999 777 4 55 4 55 0 2 8888 4 2 99999 55 333333333333333333 2 3 7 3 2 55 444 1111111 1 3 7777 777 11111 1 4444444444444 1 0 4 1 00000 111111 3 4 4 4 4 4 11111111111 4 4 4 4 4 4 4 8 0 222 33 888 5 5 77 5555555555555555555555555555555555555555 33 6 6 111 6 99 6 99 2 0 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 0 5 5 88 8 000000 33 8 11111 5 1 1 66 5 6 555555555 1 4444444444 88888888 333333333333333 4 5555555555 4 66 4 5 666
lowQualScore : . .. ........... . ..... . . . ................................................... . . .......................................................... .. . .. . .. . . .. .. .................................................. . ........ . . ... .. . ....... . .. . ... .... . .. . ......... .. . . . . ..... . ... ..... ..... . .. .. . . ............ ..... ....... . ........ . ............................ .. .. . .... . . . .. . ................. . ................ . ..... .. ......... . ....................................................... .... .. ............... . .... . . . . .. . . . ............. ........... ... . .. . .. . . .... . . ..... .. .................. . . . . . .. ... ....... . . .... ... ..... . ............. . . . . ..... ...... . . . . . . ........... . . . . . . . . . ... .. ... . . .. ........................................ .. . . ... . .. . .. . . ................................................................................................................ . . . .. . ...... .. . ..... . . . .. . . ......... . .......... ........ ............... . .......... . .. . . ...
lowQualScore : 2 88 88888888888 0 11111 7 1 7 222222222222222222222222222222222222222222222222222 1 3 1111111111111111111111111111111111111111111111111111111111 33 1 22 1 00 6 6 00 00 88888888888888888888888888888888888888888888888888 0 00000000 2 6 000 55 0 8888888 6 66 6 444 7777 6 00 8 444444444 55 6 0 0 0 00000 0 000 00000 11111 0 11 11 9 1 888888888888 11111 4444444 4 22222222 0 6666666666666666666666666666 33 11 1 3333 4 4 4 11 1 88888888888888888 4 0000000000000000 0 00000 00 000000000 6 2222222222222222222222222222222222222222222222222222222 9999 11 222222222222222 8 5555 0 0 0 0 55 0 0 2 5555555555555 77777777777 000 0 55 0 55 7 2 5555 0 2 44444 66 444444444444444444 6 6 3 6 3 00 111 8888888 4 3 7777 000 77777 1 3333333333333 6 6 0 6 00000 555555 2 0 0 0 0 0 88888888888 0 0 0 0 0 0 0 0 1 999 66 999 7 7 99 2222222222222222222222222222222222222222 55 7 7 777 7 22 7 22 5 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 8 7 7 11 4 777777 66 4 66666 7 4 7 00 7 7 222222222 0 8888888888 11111111 999999999999999 4 8888888888 4 11 0 0 444
consensus : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-NGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAG-----CTT--GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT-AT-------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTTAATCTTN-TCATAA--------TTTTTT-------T-G----AGGGGA-GGGGG---A-----TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
Reference ( family-93 ) : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-NGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAG-----CTT--GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT-AT-------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTTAATCTTN-TCATAA--------TTTTTT-------T-G----AGGGGA-GGGGG---A-----TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
gi|1 : AATGTGAAT--TAATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTACCTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTATCT-GATGAAA---------G-------TT-C--CC-----C-------------C------------ACAAAC--ATGT-ATA--CAAATATATG--GTA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-TGTA-TATC---C----AAT-GT--AAATTAATATG---------TGTT--TTCGACACGAT-AG-AATT-CGATAA-----TGCA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----GAATA-------AA-TAA--------AAAAA------C----C-----AACAAC-AACAAAAATATACAT--GTGGTTGATC---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGCAGCTCTTTGGCGTTGT-TTATG-AAAGCACATTCTA-AAATC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAATT---GCTCAGAG--TCCGCTAATCTGGGTAT---C--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAG-TATATT-AGATCGGG-GTG-ATAAC---AGACCCTTTGGTGGTG-TTTAAAAAATAACA---TTGTGA-AATCG--ATACAAA-TTCGA--AGGATTTCC----CC-CAACAAAAGAAC----AAGAGTCCC-CGAG-TTTCG-TAGTCTT-G-GACGTCTAGCAAATAAG-GTGT-GAA-TTGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TTAAAATACGGGCG-G-TGTTTGA-G-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TACTTGAT-TTTACAAAA-ACTTA-TG-AAA-A-TAT-G-TCAAGTTAAAACCA-CA-A-TG-GAGAATG-C---A-GT-CAATATAT-TAC--GAGAGA--GATCAAAAG-ATC-GACGTCGGATTAGAAAAA------------A---AATA---------TTG--GGTT-GGTGATACAAAAAC-TCC-CAT---A-CGATTT--TAGT-A--TTCGTA-TGATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCAT---T-ATAAAAAAT-TAGCAATCTTCATATA-TT-GGTCATA-TTTTAAAATG---C-TTGGTTAAAAGTAGGAAA-AT-ATNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NCATAA--------TTTTTT-------TAG----AAGGGATGGGGGTTAA-----TAAAAATCCA-CAC--TTCAGGT-GCTTGTG-CTGAAA--CTAGGCCT
gi|10 : GAATTGAATGAA-----------AACAC-TCCACAAGTGATAAGGA-----TAT-TTAGTGTTTAATTAC-AGATGAG
gi|10 : TATTT-GATGAAA---------G-------TC-C--TC-----C------------------------------AC--ATGT-ATA--CGAATATATG--AGA-G-AAAA--AG--C--------------A--------------TCATTTCAAATTGTT------AATC-G--------G-AC-T---G--T--TGACAA-------A-CACT-AGTA-TATC---C----AAT-GT--AAATTAGAATGCTGGTTT--TTTT--TTC-ACACGAT-AT-AATT-CGATAA-----TACA-TG---TCAGGC-----TCAA-C---TAA-ACCG--CCTT--TT-TAA------------AAAT-----AAA-A-------AA-AAATATTTTTTAAAAA------C----C-----AACAAT-----AAAAC-CACTT--GTGTTTGACT---TCTG-AAAAT-ATAT-TGG--GTCGGC----T-------------CGGTGT-TTATG-AATGCACATTGTA-AAGTC-CA-----CGCATTTTCG--GAGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttgatgaaagtcctccacatgtatacgaatatatgagagaaaaagcatcatttcaaattgttaatcggactgttgacaaacactagtatatccaatgtaaattagaatgctggtttttttttcacacgatataattcgataatacatgtcaggctcaactaaaccgcctttttaaaaataaaaaaaaatattttttaaaaaccaacaataaaaccacttgtgtttgacttctgaaaatatattgggtcggctcggtgtttatgaatgcacattgtaaagtccacgcattttcggagga
gi|11 : gaattgaatgaaaacactccacaagtgataaggatatttagtgtttaattacagatgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaTTTGGATAC----CCGA-AAGA-GG-TG-T--AAA----TGTT-G-------------TA-----------TTTGACGAT----------AGAGCA---TTGTGT-ATTCC--ATGCAAA-ATCGA--AGGGTTCCC----C----ACAAA-GAAC----TAG-------CAA--TCCT--TAA-------GACTTCTAGCAAAAAAG-GTGT-GAA-ATGTA--TT-GGAGT-------CG-TG-AGATAC-----AGA---T------------------------A-AGGAGA---------CCAAT-----GAACAGAACAGTTTCTCGAT-TTTAAAAAA-ACTTA-TG-AAT-A-T-T---T----TCAAAACCAACA-A-TG-GACAGTG-C-AAA-ATTCGATAT---TAG--AAGCGA--CATTAAACG-ATC-GACGTCGGGTT--AAATA------------A---AATC---------TTA--AG---GGTGGTATAAACACTTCC-CAT---ACCGA-AT--TAGTAA--TTAGTGTTAATAa
gi|12 : t-AAAGCACAT-GTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-GTTT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GGGTG-T--AAAA-TATATT-GGATCGGA-G-------------ACCCGTTGGCGTGG-TTTAAGAATCATCA---TTGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CC-C-ACAAAAAAAC----TAGAGTCCC-CGAGTTTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGT-GAA-A-----------AGT-------CGCCG-CGATACCGGTCAGA---TT----tta
gi|13 : gaTAT--AAAGCAC-TTGTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-TATT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GG-TG-T--AAAAATATATTTGGATCGGC-G-----------AGACCCGTTGGCGGTGTTTTAAGAATCATCA----TGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CCACAAGAAAA-AAC----TAGAG-CCC-CGAG-TTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGTCGAA-A-----------AGT-------CGCCGCCGATAC----Caagaga
gi|14 : TGAAGTGAATGAA-----------AGTAC-TTCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-ACACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTAT----------------------------C-T--CT-----C-------------C-------------TACAC--ATGT-ATA--CGAATATATG--GGA-G-AACA--AG--C--------------A--------------T-------------T------AATC-A--------GAAC-T---G--TC-TGACAA-------A-CACT-TGTA-TATC---A----AAT-TT--AGATT-ATTTT---------TTTT--TTCGGCACGAT-AA-AAAT-TTATAA-----TACA-TG---TCAGGG-----TCAA-G---TAA-gtcaga
gi|15 : gACTA-------A-CATT-TGTA-TATC---C----CAT-GT--AAATCGAAATG---------TTTT----CGCCACAGT-AG-AATT-CGATGA-----TAAC-TG---TCACGG-----TCGC-A---TCA-ACCG--CCTA--TT-TGA------------AAATCAAAAAAATA-------AA-TAA--------ACAAA-----------------AACAA--AACAAAA---CACACTAGAGTTTGATA---TCTG-AAAAT-ATAT-TGG--GTTGGCGCGATAGCGGCCCTTTGGCGATGT-CTATG-A
gi|16 : AATGTGAAT--TGATATGAAGTGAAAGAA-----------AGCAC-TCTATATGTGATAAGGA------ATATTAGTATTTAATTAC-AGATGA
gi|16 : ttgacattgtatta--------AAAATTATTT-GATGAAA---------G-------TCAC--AC-----A-------------C------------ACACAC--Aannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttaaaattatttgatgaaagtcacacacacacacac
gi|17 : ttgacattgtattaaatgtgaattgatatgaagtgaaagaaagcactctatatgtgataaggaatattagtatttaattacagatgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttTGTAC-ATTTAAAAAATAGT-ATCTGT-TA-A-GT-GGTAAT--TTT-AAAA-G---C-TTG-CTAAAGGTAG-AAA-AT-AT-------AACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA----------AA--------TCTTTT-------------------G-GGGGG---A-----TAAAAATCCA-CAT--TTCAGGT-GCCTGTG-TTGAAA--CCAGGCCTc
gi|18 : A--------TTATTT-------T-T----AGAGGA-GGGGG---AGGTTTTAAAAATCCA-CAC--TTCAGGT-GCCCGT
gi|19 : tcaaaagcttgctaaaagtagaaactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnac-T---G--TC-TGACAA-------A-CACT-TGTA-TATC---C----AAT-GC--AAATTAAAATG---------TTTT--TTCCACCCGAT-AG-AATT-CGAAAA-----TGCA-TG---TCAAAG-----TCAA-C---TAA-ACAG--CTTA--TT-TAG------------AAAT-----AAATA-------AA--AATATTTATTAAAAA------C----C-----AACA------AAAAAC-CACAT--GTGTTTG
gi|2 : ATT-TTT-GATGAAAAGTAGTGCAG-------TT-CTACA-----C-------------A------------ACACACT-ATGT-ATATTCGAATAT-TG--GGA-G-AAAA--AT--C--------------ATTCATTTAAAATCGT-------------T------AATC-G--------GAACATTTAG--TC-TG-CAAGACCAATA-TACTATGTATTATC---C----AAT-GTTAAGACTTAAATG----------TTT--TTCGACACGATCAGTAATTCCGATTACGATCTACAGTGGGTCCAGGGCTTCTTCAA-CCTATGATATCGTTCGTA--TTATTA------------AGAT-----ATATAACTTAAGAA-TAA--------AAATATTTTCTT----T-----AA-AGA-AGCAACAAT---CAT--GT-TTTGACTTAGTCTGCAAAATAACCT-TGGTTGTCGGCGCGGTG----------------GT-CTAT----------CTGTACAAGTC-CAGCATGCGCAAATTCG--GGGGG------T-
gi|2 : tcacattataatg--CTGTT-GACTTCACCTCCGACAAGATGGCTG-TT-GAAA-TATATT-GG-TCAGACG-G-GTGACCTTAGACCTTTAGAC-----TT----AAAGACCAGGCTTTTGTCAATCTTAATGCAAT-TTCGATTAGAG-TTCCAGAACC-TATCGAAAGATCAGTATAAAGTCT----AA-CTC----AGTC-C-GAGAGGTCT-----------GTGT---A-ATGTAATTT-G-ATTCCTGCTCCGCCG-AGATAC----C-GATAGTT----TACGGCCATT-TGTTT-A-G-Agtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|2 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattTGTTCATGTACCATATAAAAT-ACGT--TCTTCATA-A-GCAGGTAAT--TTTGAAAA-GGAGCGTTCGCTTAAA-TATGAAG-GT-ACG------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTCTATTTT----TCTTG-TCATAA--------TATCTTGGGGGGGG-G----GGGGGA-GGGGG---A-----TAAAAATCCA-CATTATTCAGGTGGCTTGAG-CTGAAA---CAGGCCTatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|20 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagtAATTATTT-GATGAAA---------G-------TC-A--CA-----CACA----------C------------ACACAC--ATGT-ATA--CGAATAT-TG--GGA-G-AAAA--AG--C--------------A--------------T-------------CATTTCAAATC-GTTAATC--GGAC-T---G--TC-TGACAA-------A-TACT-A--A-AATC---CTTAAAAC-AA--AAATTACAATT---------TTTaa
gi|21 : ATGTAATAAGGA-----TAT-TTAGTATTTATTTACAAGATGAGgtacaatatata
gi|21 : ct--------AAAATTATCT-GATGAAA---------GCACCCCTTC-C--CC-----CTCCCCGCACTCTAC------------ACCCAC--ATGT-ATA--CGAATATttctctttcttctttaaaattatctgatgaaagcaccccttccccctccccgcactctacacccacatgtatacgaatattata
gi|22 : ctatgtaataaggatatttagtatttatttacaagatgagttctctttcttcttt---TCTA-AAAAT-ATAT-TGG--GTCGGCGCG-----------------GTTT-TTATG------------TA-A-GTC-CA-----CGCAAATTCG--GAGGG------T-GTCTTCGGCAA----------------------AAGAAAAAAAAAGAAAAACCAACAA-------AAAACTAAAG---GCTCAGAG--TCCGCTAATCTGtata
gi|23 : CG-AGATAC----CAGA---TT----TACGAGCG-G-TGTTT-A-GGAGAAGAAAA-TTGCTA-AAT-----GAACAC------TTTTCGAT-TTTACAAAA--CTT----------------------TCAAAACCA-TA-A-TG-GACAATG-C-AAA-AT-CG
gi|24 : --------AAAATCATCT-GATGAAA---------G-------TC-C--CC-----CACTGATCCACCCAC------------ACACAC--ATCT-GTA--CGAGTATATA--GGA-G-AAAA--AG--C--------------A--------------T-------------C------A
gi|25 : tctctctctctctgtt--------AAAATTATTT-GATGAAA-----------------TC-C--CCTCCCTC-------------C------------TCACAC--ATGT-ATA--CGAATATACG--GGA-G-AAAA--AG--C--------------ATCATTTGAAATCG-T-------------T------AATC-G--------GGAC-tttcaaatcga
gi|26 : tctctctctctctcAATGTGAATGTTGATATGTAGTGAATAAATTTTTTAAAAAGGCATATCCACATGTGATACGGA-----TAT-TTAGTATTT
gi|27 : ttgaacatggtactTCTATATTTTTT----TTT-TCATAA--------TCTTTTGTT----T-G----GGGGGA-GGGGG---A-----TAAAAATTCA-CAT--TTCAGGT-GCCTTTG-CTGAAA--CCAGGCCTgaatacgaa
gi|28 : -AGAAGAACA-TTGCTACAAT-----AAACAA------TTTCTGAT-ATTACAGAA-ACTTA-TG-AAA-A-A-T-GTTCAAGTTAAAACCA-TACC-TG----AATG-C-AAA-AT-caagac
gi|29 : AAATTATTT-GATGAA----------G-------CC-C--CC-----C-------------CCCCTCCACACACACACAC--ATGT-ATA--CGAATAT
gi|3 : tctccctctctcttcAAATTATTTTGATGAA----------G-------TC-C--AC--------------------------------ACACAC--ATGT-ATA--CGAA-ATTTGTCGCA-G-AAAAGCAATTC--------------A--------------T-------------TTCA---AATC-GTCAGATGAGGAC-T---G--TC-GGACAA-------AATACT-AGTA-TATC---C----AAT-GT--AAATT--AATG---------TTTTTCTTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGT-----AAAA-C---TAA-GTCG--CCTATTTT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATA------T----TTTTTAAAAAACTAAC--AATT-CACAT--GTG--TGATT---TCTG-AAAAT-ATAT-TGG--GTCGGC--------------T--GCGGTGT-TTATGTAAAG------------GTC-CA-----AGCAAATTCG--GATGG------T-GTTTTCCGCAA----------------------AA----------------------A-------A
gi|3 : tctctctctccctctcG---ACTCAGAG--TCCGCTAATCTGG------------------TTGACATC----CAGA-AAGA-GG-TG-TCCAATA-TATATT-TGATCATA-G-GGATACC---AGACC-TTTGACA-CG-T------AAGAGCA---GTGTGT-AATCC--ATGCAAAATTCGA--AGGGT--CC----CC-CAACAAAAGAAC-----AGAGTCCC-CGA--------------------------GCA-----G-GTGTTGAA-ATGTA--TT-G-AG--------CGGCG-AGATAC----CAGA---TT----TACGGCCG-T-TAT---------------A-TTGTTCCAAT-----GAATTG------TG-TCGAT-TTTACAAAA-TCTTAGTG-AAA-A-T-TTG-T----TCAAAACCA-CA-A-TG-GTCAATG-CCAAA-AT-TGATCT---TACC-GAGCGG--GATTAAAATTATC-GGTGCCGGATT--ACAAA------------A---A------------TCGAAGG---AGTG-TACAAAAAC-TGC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAAcccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|3 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCATGTAC-ATATAAAAT-TAGT-TTC-TCATA-A-GT--GTAAT--TTTTAAAA-A---C-TT-GCTAAAAGTAGAAAAGAT-ATTANN---N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NCATAATCTTTTTTTTTTTT-------T-G----AGG----GGGGG---G-----TAAAAATCCACCAT--TTCAGGT-GCCTGTGTCTGAAACCCCAGGCCTattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|30 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattaAATG---AT--TAATATGAAGTGAATGAA-----------AACAC-TCCACGT---ATAAGAACAAGTTAT-TTCGTA-TTATTTAC-AGA
gi|31 : g--------TTTTTT-------T-GGAGGAGGGGA-AGGGGTTTA-----CAAAAATCCA-CAC--TTCTGGT-GCCTG
gi|33 : tttatattattttttGGGA-GGGG-------------AAATCCA-TAC--TTCAGGT-GCATGTG-
gi|34 : ttagaaaggaGCAAATTCG--GAGGG------TGTTTTCCGGAAA----------------------AA----------------------A-------AGAAata
gi|35 : TGAA-TCAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAagaaaaaaaac
gi|36 : agATGAAGTAAATGAA-----------AACAC-TCCAC--GTGATAAGAA-----CA
gi|4 : -------------C------------ACACAC--ATGTTATA--C-AATAT-TG--GGAAG-AAAA--AG--CCATCATTTCAAATCG--------------T-------------T------AATCCG--------GGAC-T---GCTTC-TGACAA-------A-TACT-AGTG-TATTGGGC----AATTGT--AAAT--AAATGGGTATTTTATTTT--TT--------T-TG-AATT-CGATAA-----TA-A-TC---TCAG-------TCAAAC---TAA--TCG--CCTA--ATATTA------------AAAT-----AAATA-------AAATAA--------AAATA------TGTTTT-----AA-AA--AACTAACAT-CACAG--GT-TTGGAT---------GAAAT-ATATCTGG--GTCGGCGCG-CAG-------------GTATGTTATG-TAA-----------AAGTCACA------ACAAA--CGAAGAGGG------TGTTTTTCCGCAACCAAAAAAAAACCAAAAACAAAAA----------------------A-------AGAAACAAAACAAAC-CAAAGACTCCGCTAA-------------------CTGTT-GACTTC----CCGA-A-GA-GG-TGCT--AAAA-TATATT-G-ATTAGA-G---ATACC---AG-CCCTT-----GAG-TC----GAAGAGCA---TGATGT-AATCC--ATGCAAA-TT-GA--AGG----TC----CC-CAA-AAAAGAAC----TAGAGTTCC-C----------------------CG--------AGGAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATA-----CAGA---T----------GCG-GCCGTT------------AAA-TTGTT-CAAT-----GA--TG------TTC-CGATCTTTACAAAT-ACTTA-TG-AAA-A-T-T-------GTCAAAACCA-CA-A-TGCGACAATGCC-AAA-ATACGA-ATAT-TACGAGAGCGGGCAATTAAAAG-ATC-GACGTC-GATT--CAAAA------------ATGTAA----------------GG-T-----GTACAAAAAC-TTC-CGTTGGA-CGATTTAGTTGT-A--TTag
gi|4 : aTTCATGT-AATGTAC-ATATAAA---TAGT-TTCT-CATA-ATGC-GTTAAT--TTTTAAAG-C---C-TTTGCT-AAAGTA-GAAA-AT-AT-------A-tattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|4 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattGGT-GCCTGTG-CTGGAAACCCAGGCCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|5 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggTCT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACACATATGT-ATA--CG--TATATG--GAA-GAAAAA--AG--C--------------A--------------TAATTTC-------T------AATC-G--------TTA------A--TCAGGATAT-------A-CACT-TGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACAAC-AG------------------ACA-TG---TCAGGT-----TCAA-T---TAA-ACCG--TCTA--TT-TGAACATATATAGATAAAT-----AAATA-------AA-TAA--------AAAAA-----------C-----AACAAA-AACCACAAT---CAT--GTGTTTGATA---GTTG-AAAAT-ATAT-TTG--ATCTAGGCAACAGCAGTCCTTTGGCAGTGT-TTGTG--AAGCACTTTGTA-AAGTA-CA-----CGAAAATTCA--GAAGGTTTGTTT-TTTTTTGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGTTCATCTGGGTTT---T--CA--GTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCAGA-GCG-ATAGC---AGACCCTTTGGCGGCG-TTTAAGAAAGTGTA---TCATGT-AATCC--ATGCAAA-TTCGA--AGGGTTT-T----CC-CGACAAAAGAAC----TAGAGTCCA-AGAG-TTCCCTTAGCT-A-T-GACTTCTAGCAAAGAAG-GTGT-GAA-ATGTA--T------T-------CGGCG-ATATc
gi|6 : GT-ACA--CGAATATTTG--GGA-G-AAAA--AG--T--------------T--------------T-------------C------AA--------------A--T---G--TC-TGACAA-------G-CACT-AGTA-TATC---C----AAT-GT--AAATTAAAATGTT-------TTTT--TTCAACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG------CAA-G---TAA-ATCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATAGTTT--T----T-----AAAAACTAAC---AAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATA--TGG--GTCGGCGCGGT-G-----TTT----AATGT-T------AAGTCCACCGC--AAGTC-CA-----CGCAAATTCG--GGGGG------T-GTTTTCGGCAA----------------------AA----------------------ACAAAAACAAAACTAAA-----CT-AAA--------TAAT------------------CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGAGG-G-ATAGC---AGA-CCTTTGAC-GT---------AAGAGCA---TTGTGC-AATCC--ATGCAAA-TTCGA--AGGGTT--C----CC-CAACAAAAGAAC----TAGAGTCCT-CGA----------------G-GACTTCTAGCGAAAAAA-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TAC-GGCG-A-T-----------CAGAAAA-TTGTTCCAATGAACAGAACAG------TTCTCGAT-TTTACAAAA-ACT----------------------GTCAAAACCG-CA-A-TG-GACAATG-C-AAATAT-CGAtgagtcggtccgcgaataacg
gi|7 : -G-ATAAGAAAAATTGTTCCAATAAACAGAACAG------TTGTCGAC-TTTACAAAT-ACTTA-TGAAAA-A-T-T-G-TCA----AAAACCA-CA-ACTG-GACAATG-C-AAA-AT-CGACATACGTAC----ACGG--GATTAAAAG-ATCGGACATCGGATT--CAAAA------------A----------------TC----G-T-AAT-GTACAAAAAC-TTCACGT---A-CGATTT--TAGT-ATTTTC-TG-TAA
gi|7 : CTTTTCATGTAC-ATATAAAAT-GAGC--TCT-CATA-A-GTTGGTAAT--TTA-AAAA-G---C-T-GG-TAAATATTTGAAA-GTCNN-------N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCATGATAA--------TTTTT----------------GGGGA-GGGG----------TAAAAA-CCA-CAT--TTCAGGT-GCCTGTG-CTGAAG--ACAGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcatgtacatataaaatgagctctcataagttggtaatttaaaaagctggtaaatatttgaaagtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttcatgataatttttggggaggggtaaaaaccacatttcaggtgcctgtgctgaagacaggcc
gi|8 : gataagaaaaattgttccaataaacagaacagttgtcgactttacaaatacttatgaaaaattgtcaaaaaccacaactggacaatgcaaaatcgacatacgtacacgggattaaaagatcggacatcggattcaaaaatcgtaatgtacaaaaacttcacgtacgattttagtattttctgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-TTCC--TAATC-TTG-GACGTCTAGCAAAAAAG-ATGT-GAA-CAGTA--TT-G-AGT-------TGGCG-AGATAC----CAGA---TG----TACGGGCG-G-TGTTT-AAG-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TTATCGAT-TT-ACAAAATACTTA-TG-AAA-AAT-T-G-TCAAGTTAAATCTA-CA-A-TG-GAAAATG-C-AAA-AT-CGATATGT-TAC--GAGTGA--TATCAGAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------
gi|8 : agtATGTTC-ATGTAAAAT-TAGC-ATCTT-ATA------GGTAATGATTTTAAAA-G---C-TT-GCTAAAAGTAGAAAA-cttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagatgttcatgtaaaattagcatcttataggtaatgattttaaaagcttgctaaaagtagaaaat
gi|9 : agtttcctaatcttggacgtctagcaaaaaagatgtgaacagtattgagttggcgagataccagatgtacgggcggtgtttaagagaagaaaattgttccaataaacagttatcgatttacaaaatacttatgaaaaattgtcaagttaaatctacaatggaaaatgcaaaatcgatatgttacgagtgatatcagaagatcgacgtcggattaaaaaaaatcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagAG---CCTCAGAT--TCTGCTAATCTGGG--TCATT--CAAATTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATA-GG-TCGGA-GTG-ATAGC---AGACCCTTTGGAGGTG-TTTAAGAAAGAGTA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGGTTCC----CT-CCATAAAAAGA------AGAGTCCCGCGAGTTTCC--TAATCTT-G-GACGTCTAGCAAAAAAATGTGT-TAAGATGTA--TTCG-AGT-------TGGCG-AGATAC----CAGA---TT----TACGGGCA-G-TGTTTAA-G-AAAAAAACA-TTCTTTCAAT-----AAACAG------TTCTTGAT-TTTACAAAA-ACTTA-TG-AAATA-T-T-G-TCAAGTTAAAACCA-CA-A-TG-GACGATG-C-AAA-AT-CAATATAT-TTC--GTGTGA--TATTAAAAG-ATC-GACCTTGGATT--AAAAAAGAACATTTACCA---AATCAAACAGTTATGG--GG-TGGGTGGTTCAAAAAC-TCC-AGT---A-CGATTT--TAGT-A--Tt
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): TGTATTACGGGTAATTAGTATTTAGTTACATATGAATTCTCTCTCTTAAAATTATCTGAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 22222222222 11111 666666666666666666666666666666666666666666666666666 5555555555555555555555555555555555555555555555555555555555 99999999999999999999999999999999999999999999999999 22222222 1111111 333333333 11111 11111 11111 222222222222 11111 1111111 33333333 5555555555555555555555555555 1111 99999999999999999 3333333333333333 11111 111111111 6666666666666666666666666666666666666666666666666666666 555555555555555 2222222222222 22222222222 555555555555555555 1111111 11111 2222222222222 22222 111111 33333333333 111 11 9999999999999999999999999999999999999999 111 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11 222222 11 11111 1 444444444 3333333333 11111111 444444444444444 2222222222 111
lowQualScore : 3 33 33333333333 5 11111 5 0 6 777777777777777777777777777777777777777777777777777 0 3 8888888888888888888888888888888888888888888888888888888888 77 3 44 9 55 3 3 55 55 00000000000000000000000000000000000000000000000000 4 66666666 3 3 777 55 4 1111111 3 44 3 666 7777 3 55 5 111111111 55 1 4 4 4 00000 4 777 00000 00000 4 66 66 8 0 222222222222 11111 4444444 4 22222222 1 1111111111111111111111111111 77 66 1 3333 4 4 4 66 1 88888888888888888 4 0000000000000000 4 00000 55 777777777 3 8888888888888888888888888888888888888888888888888888888 7777 66 333333333333333 0 8888 4 4 8 4 99 4 4 3 9999999999999 99999999999 777 4 55 4 55 0 2 8888 4 2 99999 55 333333333333333333 2 3 7 3 2 55 444 1111111 1 3 7777 777 11111 1 4444444444444 1 0 4 1 00000 111111 3 4 4 4 4 4 11111111111 4 4 4 4 4 4 4 8 0 222 33 888 5 5 77 5555555555555555555555555555555555555555 33 6 6 111 6 99 6 99 2 0 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 0 5 5 88 8 000000 33 8 11111 5 1 1 66 5 6 555555555 1 4444444444 88888888 333333333333333 4 5555555555 4 66 4 5 666
lowQualScore : . .. ........... . ..... . . . ................................................... . . .......................................................... .. . .. . .. . . .. .. .................................................. . ........ . . ... .. . ....... . .. . ... .... . .. . ......... .. . . . . ..... . ... ..... ..... . .. .. . . ............ ..... ....... . ........ . ............................ .. .. . .... . . . .. . ................. . ................ . ..... .. ......... . ....................................................... .... .. ............... . .... . . . . .. . . . ............. ........... ... . .. . .. . . .... . . ..... .. .................. . . . . . .. ... ....... . . .... ... ..... . ............. . . . . ..... ...... . . . . . . ........... . . . . . . . . . ... .. ... . . .. ........................................ .. . . ... . .. . .. . . ................................................................................................................ . . . .. . ...... .. . ..... . . . .. . . ......... . .......... ........ ............... . .......... . .. . . ...
lowQualScore : 2 88 88888888888 0 11111 7 1 7 222222222222222222222222222222222222222222222222222 1 3 1111111111111111111111111111111111111111111111111111111111 33 1 22 1 00 6 6 00 00 88888888888888888888888888888888888888888888888888 0 00000000 2 6 000 55 0 8888888 6 66 6 444 7777 6 00 8 444444444 55 6 0 0 0 00000 0 000 00000 11111 0 11 11 9 1 888888888888 11111 4444444 4 22222222 0 6666666666666666666666666666 33 11 1 3333 4 4 4 11 1 88888888888888888 4 0000000000000000 0 00000 00 000000000 6 2222222222222222222222222222222222222222222222222222222 9999 11 222222222222222 8 5555 0 0 0 0 55 0 0 2 5555555555555 77777777777 000 0 55 0 55 7 2 5555 0 2 44444 66 444444444444444444 6 6 3 6 3 00 111 8888888 4 3 7777 000 77777 1 3333333333333 6 6 0 6 00000 555555 2 0 0 0 0 0 88888888888 0 0 0 0 0 0 0 0 1 999 66 999 7 7 99 2222222222222222222222222222222222222222 55 7 7 777 7 22 7 22 5 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 8 7 7 11 4 777777 66 4 66666 7 4 7 00 7 7 222222222 0 8888888888 11111111 999999999999999 4 8888888888 4 11 0 0 444
consensus : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-NGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAG-----CTT--GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT-AT-------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTTAATCTTN-TCATAA--------TTTTTT-------T-G----AGGGGA-GGGGG---A-----TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
Reference ( family-93 ) : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-NGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAG-----CTT--GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT-AT-------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTTAATCTTN-TCATAA--------TTTTTT-------T-G----AGGGGA-GGGGG---A-----TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
gi|1 : AATGTGAAT--TAATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTACCTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTATCT-GATGAAA---------G-------TT-C--CC-----C-------------C------------ACAAAC--ATGT-ATA--CAAATATATG--GTA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-TGTA-TATC---C----AAT-GT--AAATTAATATG---------TGTT--TTCGACACGAT-AG-AATT-CGATAA-----TGCA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----GAATA-------AA-TAA--------AAAAA------C----C-----AACAAC-AACAAAAATATACAT--GTGGTTGATC---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAGCAGCTCTTTGGCGTTGT-TTATG-AAAGCACATTCTA-AAATC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAATT---GCTCAGAG--TCCGCTAATCTGGGTAT---C--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAG-TATATT-AGATCGGG-GTG-ATAAC---AGACCCTTTGGTGGTG-TTTAAAAAATAACA---TTGTGA-AATCG--ATACAAA-TTCGA--AGGATTTCC----CC-CAACAAAAGAAC----AAGAGTCCC-CGAG-TTTCG-TAGTCTT-G-GACGTCTAGCAAATAAG-GTGT-GAA-TTGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TTAAAATACGGGCG-G-TGTTTGA-G-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TACTTGAT-TTTACAAAA-ACTTA-TG-AAA-A-TAT-G-TCAAGTTAAAACCA-CA-A-TG-GAGAATG-C---A-GT-CAATATAT-TAC--GAGAGA--GATCAAAAG-ATC-GACGTCGGATTAGAAAAA------------A---AATA---------TTG--GGTT-GGTGATACAAAAAC-TCC-CAT---A-CGATTT--TAGT-A--TTCGTA-TGATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCAT---T-ATAAAAAAT-TAGCAATCTTCATATA-TT-GGTCATA-TTTTAAAATG---C-TTGGTTAAAAGTAGGAAA-AT-ATNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NCATAA--------TTTTTT-------TAG----AAGGGATGGGGGTTAA-----TAAAAATCCA-CAC--TTCAGGT-GCTTGTG-CTGAAA--CTAGGCCT
gi|10 : GAATTGAATGAA-----------AACAC-TCCACAAGTGATAAGGA-----TAT-TTAGTGTTTAATTAC-AGATGAG
gi|10 : TATTT-GATGAAA---------G-------TC-C--TC-----C------------------------------AC--ATGT-ATA--CGAATATATG--AGA-G-AAAA--AG--C--------------A--------------TCATTTCAAATTGTT------AATC-G--------G-AC-T---G--T--TGACAA-------A-CACT-AGTA-TATC---C----AAT-GT--AAATTAGAATGCTGGTTT--TTTT--TTC-ACACGAT-AT-AATT-CGATAA-----TACA-TG---TCAGGC-----TCAA-C---TAA-ACCG--CCTT--TT-TAA------------AAAT-----AAA-A-------AA-AAATATTTTTTAAAAA------C----C-----AACAAT-----AAAAC-CACTT--GTGTTTGACT---TCTG-AAAAT-ATAT-TGG--GTCGGC----T-------------CGGTGT-TTATG-AATGCACATTGTA-AAGTC-CA-----CGCATTTTCG--GAGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttgatgaaagtcctccacatgtatacgaatatatgagagaaaaagcatcatttcaaattgttaatcggactgttgacaaacactagtatatccaatgtaaattagaatgctggtttttttttcacacgatataattcgataatacatgtcaggctcaactaaaccgcctttttaaaaataaaaaaaaatattttttaaaaaccaacaataaaaccacttgtgtttgacttctgaaaatatattgggtcggctcggtgtttatgaatgcacattgtaaagtccacgcattttcggagga
gi|11 : gaattgaatgaaaacactccacaagtgataaggatatttagtgtttaattacagatgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaTTTGGATAC----CCGA-AAGA-GG-TG-T--AAA----TGTT-G-------------TA-----------TTTGACGAT----------AGAGCA---TTGTGT-ATTCC--ATGCAAA-ATCGA--AGGGTTCCC----C----ACAAA-GAAC----TAG-------CAA--TCCT--TAA-------GACTTCTAGCAAAAAAG-GTGT-GAA-ATGTA--TT-GGAGT-------CG-TG-AGATAC-----AGA---T------------------------A-AGGAGA---------CCAAT-----GAACAGAACAGTTTCTCGAT-TTTAAAAAA-ACTTA-TG-AAT-A-T-T---T----TCAAAACCAACA-A-TG-GACAGTG-C-AAA-ATTCGATAT---TAG--AAGCGA--CATTAAACG-ATC-GACGTCGGGTT--AAATA------------A---AATC---------TTA--AG---GGTGGTATAAACACTTCC-CAT---ACCGA-AT--TAGTAA--TTAGTGTTAATAa
gi|12 : t-AAAGCACAT-GTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-GTTT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GGGTG-T--AAAA-TATATT-GGATCGGA-G-------------ACCCGTTGGCGTGG-TTTAAGAATCATCA---TTGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CC-C-ACAAAAAAAC----TAGAGTCCC-CGAGTTTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGT-GAA-A-----------AGT-------CGCCG-CGATACCGGTCAGA---TT----tta
gi|13 : gaTAT--AAAGCAC-TTGTA-AAGTC-AA-----CGCAAATTCG--GAGGG------G-TATT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GG-TG-T--AAAAATATATTTGGATCGGC-G-----------AGACCCGTTGGCGGTGTTTTAAGAATCATCA----TGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CCACAAGAAAA-AAC----TAGAG-CCC-CGAG-TTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGTCGAA-A-----------AGT-------CGCCGCCGATAC----Caagaga
gi|14 : TGAAGTGAATGAA-----------AGTAC-TTCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-ACACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTAT----------------------------C-T--CT-----C-------------C-------------TACAC--ATGT-ATA--CGAATATATG--GGA-G-AACA--AG--C--------------A--------------T-------------T------AATC-A--------GAAC-T---G--TC-TGACAA-------A-CACT-TGTA-TATC---A----AAT-TT--AGATT-ATTTT---------TTTT--TTCGGCACGAT-AA-AAAT-TTATAA-----TACA-TG---TCAGGG-----TCAA-G---TAA-gtcaga
gi|15 : gACTA-------A-CATT-TGTA-TATC---C----CAT-GT--AAATCGAAATG---------TTTT----CGCCACAGT-AG-AATT-CGATGA-----TAAC-TG---TCACGG-----TCGC-A---TCA-ACCG--CCTA--TT-TGA------------AAATCAAAAAAATA-------AA-TAA--------ACAAA-----------------AACAA--AACAAAA---CACACTAGAGTTTGATA---TCTG-AAAAT-ATAT-TGG--GTTGGCGCGATAGCGGCCCTTTGGCGATGT-CTATG-A
gi|16 : AATGTGAAT--TGATATGAAGTGAAAGAA-----------AGCAC-TCTATATGTGATAAGGA------ATATTAGTATTTAATTAC-AGATGA
gi|16 : ttgacattgtatta--------AAAATTATTT-GATGAAA---------G-------TCAC--AC-----A-------------C------------ACACAC--Aannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttaaaattatttgatgaaagtcacacacacacacac
gi|17 : ttgacattgtattaaatgtgaattgatatgaagtgaaagaaagcactctatatgtgataaggaatattagtatttaattacagatgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttTGTAC-ATTTAAAAAATAGT-ATCTGT-TA-A-GT-GGTAAT--TTT-AAAA-G---C-TTG-CTAAAGGTAG-AAA-AT-AT-------AACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA----------AA--------TCTTTT-------------------G-GGGGG---A-----TAAAAATCCA-CAT--TTCAGGT-GCCTGTG-TTGAAA--CCAGGCCTc
gi|18 : A--------TTATTT-------T-T----AGAGGA-GGGGG---AGGTTTTAAAAATCCA-CAC--TTCAGGT-GCCCGT
gi|19 : tcaaaagcttgctaaaagtagaaactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnac-T---G--TC-TGACAA-------A-CACT-TGTA-TATC---C----AAT-GC--AAATTAAAATG---------TTTT--TTCCACCCGAT-AG-AATT-CGAAAA-----TGCA-TG---TCAAAG-----TCAA-C---TAA-ACAG--CTTA--TT-TAG------------AAAT-----AAATA-------AA--AATATTTATTAAAAA------C----C-----AACA------AAAAAC-CACAT--GTGTTTG
gi|2 : ATT-TTT-GATGAAAAGTAGTGCAG-------TT-CTACA-----C-------------A------------ACACACT-ATGT-ATATTCGAATAT-TG--GGA-G-AAAA--AT--C--------------ATTCATTTAAAATCGT-------------T------AATC-G--------GAACATTTAG--TC-TG-CAAGACCAATA-TACTATGTATTATC---C----AAT-GTTAAGACTTAAATG----------TTT--TTCGACACGATCAGTAATTCCGATTACGATCTACAGTGGGTCCAGGGCTTCTTCAA-CCTATGATATCGTTCGTA--TTATTA------------AGAT-----ATATAACTTAAGAA-TAA--------AAATATTTTCTT----T-----AA-AGA-AGCAACAAT---CAT--GT-TTTGACTTAGTCTGCAAAATAACCT-TGGTTGTCGGCGCGGTG----------------GT-CTAT----------CTGTACAAGTC-CAGCATGCGCAAATTCG--GGGGG------T-
gi|2 : tcacattataatg--CTGTT-GACTTCACCTCCGACAAGATGGCTG-TT-GAAA-TATATT-GG-TCAGACG-G-GTGACCTTAGACCTTTAGAC-----TT----AAAGACCAGGCTTTTGTCAATCTTAATGCAAT-TTCGATTAGAG-TTCCAGAACC-TATCGAAAGATCAGTATAAAGTCT----AA-CTC----AGTC-C-GAGAGGTCT-----------GTGT---A-ATGTAATTT-G-ATTCCTGCTCCGCCG-AGATAC----C-GATAGTT----TACGGCCATT-TGTTT-A-G-Agtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|2 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattTGTTCATGTACCATATAAAAT-ACGT--TCTTCATA-A-GCAGGTAAT--TTTGAAAA-GGAGCGTTCGCTTAAA-TATGAAG-GT-ACG------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTCTATTTT----TCTTG-TCATAA--------TATCTTGGGGGGGG-G----GGGGGA-GGGGG---A-----TAAAAATCCA-CATTATTCAGGTGGCTTGAG-CTGAAA---CAGGCCTatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|20 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagtAATTATTT-GATGAAA---------G-------TC-A--CA-----CACA----------C------------ACACAC--ATGT-ATA--CGAATAT-TG--GGA-G-AAAA--AG--C--------------A--------------T-------------CATTTCAAATC-GTTAATC--GGAC-T---G--TC-TGACAA-------A-TACT-A--A-AATC---CTTAAAAC-AA--AAATTACAATT---------TTTaa
gi|21 : ATGTAATAAGGA-----TAT-TTAGTATTTATTTACAAGATGAGgtacaatatata
gi|21 : ct--------AAAATTATCT-GATGAAA---------GCACCCCTTC-C--CC-----CTCCCCGCACTCTAC------------ACCCAC--ATGT-ATA--CGAATATttctctttcttctttaaaattatctgatgaaagcaccccttccccctccccgcactctacacccacatgtatacgaatattata
gi|22 : ctatgtaataaggatatttagtatttatttacaagatgagttctctttcttcttt---TCTA-AAAAT-ATAT-TGG--GTCGGCGCG-----------------GTTT-TTATG------------TA-A-GTC-CA-----CGCAAATTCG--GAGGG------T-GTCTTCGGCAA----------------------AAGAAAAAAAAAGAAAAACCAACAA-------AAAACTAAAG---GCTCAGAG--TCCGCTAATCTGtata
gi|23 : CG-AGATAC----CAGA---TT----TACGAGCG-G-TGTTT-A-GGAGAAGAAAA-TTGCTA-AAT-----GAACAC------TTTTCGAT-TTTACAAAA--CTT----------------------TCAAAACCA-TA-A-TG-GACAATG-C-AAA-AT-CG
gi|24 : --------AAAATCATCT-GATGAAA---------G-------TC-C--CC-----CACTGATCCACCCAC------------ACACAC--ATCT-GTA--CGAGTATATA--GGA-G-AAAA--AG--C--------------A--------------T-------------C------A
gi|25 : tctctctctctctgtt--------AAAATTATTT-GATGAAA-----------------TC-C--CCTCCCTC-------------C------------TCACAC--ATGT-ATA--CGAATATACG--GGA-G-AAAA--AG--C--------------ATCATTTGAAATCG-T-------------T------AATC-G--------GGAC-tttcaaatcga
gi|26 : tctctctctctctcAATGTGAATGTTGATATGTAGTGAATAAATTTTTTAAAAAGGCATATCCACATGTGATACGGA-----TAT-TTAGTATTT
gi|27 : ttgaacatggtactTCTATATTTTTT----TTT-TCATAA--------TCTTTTGTT----T-G----GGGGGA-GGGGG---A-----TAAAAATTCA-CAT--TTCAGGT-GCCTTTG-CTGAAA--CCAGGCCTgaatacgaa
gi|28 : -AGAAGAACA-TTGCTACAAT-----AAACAA------TTTCTGAT-ATTACAGAA-ACTTA-TG-AAA-A-A-T-GTTCAAGTTAAAACCA-TACC-TG----AATG-C-AAA-AT-caagac
gi|29 : AAATTATTT-GATGAA----------G-------CC-C--CC-----C-------------CCCCTCCACACACACACAC--ATGT-ATA--CGAATAT
gi|3 : tctccctctctcttcAAATTATTTTGATGAA----------G-------TC-C--AC--------------------------------ACACAC--ATGT-ATA--CGAA-ATTTGTCGCA-G-AAAAGCAATTC--------------A--------------T-------------TTCA---AATC-GTCAGATGAGGAC-T---G--TC-GGACAA-------AATACT-AGTA-TATC---C----AAT-GT--AAATT--AATG---------TTTTTCTTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGT-----AAAA-C---TAA-GTCG--CCTATTTT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATA------T----TTTTTAAAAAACTAAC--AATT-CACAT--GTG--TGATT---TCTG-AAAAT-ATAT-TGG--GTCGGC--------------T--GCGGTGT-TTATGTAAAG------------GTC-CA-----AGCAAATTCG--GATGG------T-GTTTTCCGCAA----------------------AA----------------------A-------A
gi|3 : tctctctctccctctcG---ACTCAGAG--TCCGCTAATCTGG------------------TTGACATC----CAGA-AAGA-GG-TG-TCCAATA-TATATT-TGATCATA-G-GGATACC---AGACC-TTTGACA-CG-T------AAGAGCA---GTGTGT-AATCC--ATGCAAAATTCGA--AGGGT--CC----CC-CAACAAAAGAAC-----AGAGTCCC-CGA--------------------------GCA-----G-GTGTTGAA-ATGTA--TT-G-AG--------CGGCG-AGATAC----CAGA---TT----TACGGCCG-T-TAT---------------A-TTGTTCCAAT-----GAATTG------TG-TCGAT-TTTACAAAA-TCTTAGTG-AAA-A-T-TTG-T----TCAAAACCA-CA-A-TG-GTCAATG-CCAAA-AT-TGATCT---TACC-GAGCGG--GATTAAAATTATC-GGTGCCGGATT--ACAAA------------A---A------------TCGAAGG---AGTG-TACAAAAAC-TGC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAAcccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|3 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCATGTAC-ATATAAAAT-TAGT-TTC-TCATA-A-GT--GTAAT--TTTTAAAA-A---C-TT-GCTAAAAGTAGAAAAGAT-ATTANN---N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NCATAATCTTTTTTTTTTTT-------T-G----AGG----GGGGG---G-----TAAAAATCCACCAT--TTCAGGT-GCCTGTGTCTGAAACCCCAGGCCTattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|30 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattaAATG---AT--TAATATGAAGTGAATGAA-----------AACAC-TCCACGT---ATAAGAACAAGTTAT-TTCGTA-TTATTTAC-AGA
gi|31 : g--------TTTTTT-------T-GGAGGAGGGGA-AGGGGTTTA-----CAAAAATCCA-CAC--TTCTGGT-GCCTG
gi|33 : tttatattattttttGGGA-GGGG-------------AAATCCA-TAC--TTCAGGT-GCATGTG-
gi|34 : ttagaaaggaGCAAATTCG--GAGGG------TGTTTTCCGGAAA----------------------AA----------------------A-------AGAAata
gi|35 : TGAA-TCAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAagaaaaaaaac
gi|36 : agATGAAGTAAATGAA-----------AACAC-TCCAC--GTGATAAGAA-----CA
gi|4 : -------------C------------ACACAC--ATGTTATA--C-AATAT-TG--GGAAG-AAAA--AG--CCATCATTTCAAATCG--------------T-------------T------AATCCG--------GGAC-T---GCTTC-TGACAA-------A-TACT-AGTG-TATTGGGC----AATTGT--AAAT--AAATGGGTATTTTATTTT--TT--------T-TG-AATT-CGATAA-----TA-A-TC---TCAG-------TCAAAC---TAA--TCG--CCTA--ATATTA------------AAAT-----AAATA-------AAATAA--------AAATA------TGTTTT-----AA-AA--AACTAACAT-CACAG--GT-TTGGAT---------GAAAT-ATATCTGG--GTCGGCGCG-CAG-------------GTATGTTATG-TAA-----------AAGTCACA------ACAAA--CGAAGAGGG------TGTTTTTCCGCAACCAAAAAAAAACCAAAAACAAAAA----------------------A-------AGAAACAAAACAAAC-CAAAGACTCCGCTAA-------------------CTGTT-GACTTC----CCGA-A-GA-GG-TGCT--AAAA-TATATT-G-ATTAGA-G---ATACC---AG-CCCTT-----GAG-TC----GAAGAGCA---TGATGT-AATCC--ATGCAAA-TT-GA--AGG----TC----CC-CAA-AAAAGAAC----TAGAGTTCC-C----------------------CG--------AGGAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATA-----CAGA---T----------GCG-GCCGTT------------AAA-TTGTT-CAAT-----GA--TG------TTC-CGATCTTTACAAAT-ACTTA-TG-AAA-A-T-T-------GTCAAAACCA-CA-A-TGCGACAATGCC-AAA-ATACGA-ATAT-TACGAGAGCGGGCAATTAAAAG-ATC-GACGTC-GATT--CAAAA------------ATGTAA----------------GG-T-----GTACAAAAAC-TTC-CGTTGGA-CGATTTAGTTGT-A--TTag
gi|4 : aTTCATGT-AATGTAC-ATATAAA---TAGT-TTCT-CATA-ATGC-GTTAAT--TTTTAAAG-C---C-TTTGCT-AAAGTA-GAAA-AT-AT-------A-tattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|4 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattGGT-GCCTGTG-CTGGAAACCCAGGCCTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|5 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggTCT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACACATATGT-ATA--CG--TATATG--GAA-GAAAAA--AG--C--------------A--------------TAATTTC-------T------AATC-G--------TTA------A--TCAGGATAT-------A-CACT-TGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACAAC-AG------------------ACA-TG---TCAGGT-----TCAA-T---TAA-ACCG--TCTA--TT-TGAACATATATAGATAAAT-----AAATA-------AA-TAA--------AAAAA-----------C-----AACAAA-AACCACAAT---CAT--GTGTTTGATA---GTTG-AAAAT-ATAT-TTG--ATCTAGGCAACAGCAGTCCTTTGGCAGTGT-TTGTG--AAGCACTTTGTA-AAGTA-CA-----CGAAAATTCA--GAAGGTTTGTTT-TTTTTTGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGTTCATCTGGGTTT---T--CA--GTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCAGA-GCG-ATAGC---AGACCCTTTGGCGGCG-TTTAAGAAAGTGTA---TCATGT-AATCC--ATGCAAA-TTCGA--AGGGTTT-T----CC-CGACAAAAGAAC----TAGAGTCCA-AGAG-TTCCCTTAGCT-A-T-GACTTCTAGCAAAGAAG-GTGT-GAA-ATGTA--T------T-------CGGCG-ATATc
gi|6 : GT-ACA--CGAATATTTG--GGA-G-AAAA--AG--T--------------T--------------T-------------C------AA--------------A--T---G--TC-TGACAA-------G-CACT-AGTA-TATC---C----AAT-GT--AAATTAAAATGTT-------TTTT--TTCAACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG------CAA-G---TAA-ATCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAATAGTTT--T----T-----AAAAACTAAC---AAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATA--TGG--GTCGGCGCGGT-G-----TTT----AATGT-T------AAGTCCACCGC--AAGTC-CA-----CGCAAATTCG--GGGGG------T-GTTTTCGGCAA----------------------AA----------------------ACAAAAACAAAACTAAA-----CT-AAA--------TAAT------------------CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGAGG-G-ATAGC---AGA-CCTTTGAC-GT---------AAGAGCA---TTGTGC-AATCC--ATGCAAA-TTCGA--AGGGTT--C----CC-CAACAAAAGAAC----TAGAGTCCT-CGA----------------G-GACTTCTAGCGAAAAAA-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TAC-GGCG-A-T-----------CAGAAAA-TTGTTCCAATGAACAGAACAG------TTCTCGAT-TTTACAAAA-ACT----------------------GTCAAAACCG-CA-A-TG-GACAATG-C-AAATAT-CGAtgagtcggtccgcgaataacg
gi|7 : -G-ATAAGAAAAATTGTTCCAATAAACAGAACAG------TTGTCGAC-TTTACAAAT-ACTTA-TGAAAA-A-T-T-G-TCA----AAAACCA-CA-ACTG-GACAATG-C-AAA-AT-CGACATACGTAC----ACGG--GATTAAAAG-ATCGGACATCGGATT--CAAAA------------A----------------TC----G-T-AAT-GTACAAAAAC-TTCACGT---A-CGATTT--TAGT-ATTTTC-TG-TAA
gi|7 : CTTTTCATGTAC-ATATAAAAT-GAGC--TCT-CATA-A-GTTGGTAAT--TTA-AAAA-G---C-T-GG-TAAATATTTGAAA-GTCNN-------N-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCATGATAA--------TTTTT----------------GGGGA-GGGG----------TAAAAA-CCA-CAT--TTCAGGT-GCCTGTG-CTGAAG--ACAGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcatgtacatataaaatgagctctcataagttggtaatttaaaaagctggtaaatatttgaaagtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttcatgataatttttggggaggggtaaaaaccacatttcaggtgcctgtgctgaagacaggcc
gi|8 : gataagaaaaattgttccaataaacagaacagttgtcgactttacaaatacttatgaaaaattgtcaaaaaccacaactggacaatgcaaaatcgacatacgtacacgggattaaaagatcggacatcggattcaaaaatcgtaatgtacaaaaacttcacgtacgattttagtattttctgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-TTCC--TAATC-TTG-GACGTCTAGCAAAAAAG-ATGT-GAA-CAGTA--TT-G-AGT-------TGGCG-AGATAC----CAGA---TG----TACGGGCG-G-TGTTT-AAG-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TTATCGAT-TT-ACAAAATACTTA-TG-AAA-AAT-T-G-TCAAGTTAAATCTA-CA-A-TG-GAAAATG-C-AAA-AT-CGATATGT-TAC--GAGTGA--TATCAGAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------
gi|8 : agtATGTTC-ATGTAAAAT-TAGC-ATCTT-ATA------GGTAATGATTTTAAAA-G---C-TT-GCTAAAAGTAGAAAA-cttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagatgttcatgtaaaattagcatcttataggtaatgattttaaaagcttgctaaaagtagaaaat
gi|9 : agtttcctaatcttggacgtctagcaaaaaagatgtgaacagtattgagttggcgagataccagatgtacgggcggtgtttaagagaagaaaattgttccaataaacagttatcgatttacaaaatacttatgaaaaattgtcaagttaaatctacaatggaaaatgcaaaatcgatatgttacgagtgatatcagaagatcgacgtcggattaaaaaaaatcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagAG---CCTCAGAT--TCTGCTAATCTGGG--TCATT--CAAATTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATA-GG-TCGGA-GTG-ATAGC---AGACCCTTTGGAGGTG-TTTAAGAAAGAGTA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGGTTCC----CT-CCATAAAAAGA------AGAGTCCCGCGAGTTTCC--TAATCTT-G-GACGTCTAGCAAAAAAATGTGT-TAAGATGTA--TTCG-AGT-------TGGCG-AGATAC----CAGA---TT----TACGGGCA-G-TGTTTAA-G-AAAAAAACA-TTCTTTCAAT-----AAACAG------TTCTTGAT-TTTACAAAA-ACTTA-TG-AAATA-T-T-G-TCAAGTTAAAACCA-CA-A-TG-GACGATG-C-AAA-AT-CAATATAT-TTC--GTGTGA--TATTAAAAG-ATC-GACCTTGGATT--AAAAAAGAACATTTACCA---AATCAAACAGTTATGG--GG-TGGGTGGTTCAAAAAC-TCC-AGT---A-CGATTT--TAGT-A--Tt
blockSeqs : T GT TTTTTTAAAAA A CAAGT A A NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN T AGCACCCCTTCCCCCTCCCCGCACTCTAC AT T TT A TC A A GC TT ATTCATTTAAAATCGTT C TCAGATGA A A TTA CT A GACCAAT A AT T GGG TTAA T TA A GGTATTTTA TC G C T C CGATC G GGT CTTCT CCTA T TT TT A ACATATATAGAT CAAAA ACTTAAG A TATTTTTT A TTTTCTTTAAAGAAGCA C TA G TTAG C A C TT G ATAGCGGCCCTTTGGCG G GAATGCACATTGTA A GCATG AA TTTGTTTT T AAGAAAAAAAAAGAAAAACCAACAAA ACAA AC GTCATTCAAAT ACCT C T G C CC A T A CGGGTGACCTT GGTGTTTTAAG GGC C TA A TT C AGAA A A AGTAT CG GTTTCCTAATCCGG A T C G T AT GG CCTGCTC C C CGGT TAG T G TTTGTTTAG G A C GAACA AACAGT C C T G A T ATGTTCAA A C C C C C T T ACG GA GCA T G . AGAACATTTACCAAATCAAACAGTTATGGGGTGG GG T A TGG C AG A TT G T C A A G AGCA GA G GGAG G G A TG G C TANNN N NNNNTCTTCA TCTTTTTT GGGGGGGGGG . GAGGTTT C TA G T CCC
blockSeqs : T . . . . . . . AGTCCCCCACTGATCCACCCAC T . . A . . . . . CATCATTTCAAATCGTT . TTAATC A . . . . . . A . . . . . G CTGGTTT . G . . . . . . . AC . . . A . . . . TATTTATT A TTTTTTAAAAAACTAAC C . G T . . . . G ACAGCAGTCCTTTGGCA . GAAGCACTTTGTA . . . TGT T CCAAAAAAAAACCAAAAACAAAAAAA G . TTTTCCAT . . . C . T . . A GGGATACC GTGGTTTAAG . . . . . T . . A T C GTTCCCTTAGCTAT G . T . T . CG . C . . . T G GTGTTTAGG G . A AAACA . T . . . . . ATTGTCAA . . . . . . . A AT C C . . . AAATCTTAAGG GG . . . . . . . G . . . T T ATGC . T G . C T GA . . AA C NNNNNNNNN . TGGAGGA . GTTTA . . . . ACC
blockSeqs : . . . . . . . . AAGTAGTGCAGTTCTACACA . . . A . . . . . ATCATTTCAAATTGTT . . G . . . . . . T . . . . . A TT . C . . . . . . . C . . . . . . . . . A GTTTTTAAAAACTAAC C . G A . . . . G GTGTTTA . AAAGCACTTGTA . . . TGT C AAACAAAAACA G . TTTTCCAT . . . . . . . . A GCGATAGC GGCGTTTAAG . . . . . T . . A T C GTTTCCTAATCTTG G . . . T . G . C . . . T G GTGTTTAAG G . A . . T . . . . . TTGTCAA . . . . . . . . GT . G . . . AATCGAAGGA G . . . . . . . . . . . T T AGTT . T A . T A TG . . GA A TCTTG . GTTTGG . GA . . . . C
blockSeqs : . . . . . . GCCCCCCCCCCTCCACACAC . . . A . . . . . ATCATTTGAAATCGTT . . G . . . . . . T . . . . . T . . G . . . . . . . G . . . . . . . . . T TGTTTTAAAAAACT C . G T . . . . G TGCG . AAGTCCACCGC . . . GG T AAAA G . GTTTTCAG . . . . . . . . A GGGATAGC GGTGTTTAAG . . . . . T . . A T C GTTCCTAATCCGG G . . . T . G . G . . . T G GTGTTTAAG T . C . . C . . . . . TTGTCA . . . . . . . . AT . G . . . ATGTAAGGT G . . . . . . . . . A T AGT . T C . G A GA . . A N TTTTT . TTA . GA . . . . C
blockSeqs : . . . . . . ATCCCCTCCCTCC . . . T . . . . . ATCATTTCA . . G . . . . . . T . . . . . A . . G . . . . . . . A . . . . . . . . . T CAACAAAAACC C . G A . . . . G TCG . CTGTAC . . . GT T AAAA G . C . . . . . . . . A GTGATAGC GAGTC . . . . . T . . G T C ACTCAGTCCGA G . . . T . G . G . . . T G GCCGTT G . C . . C . . . . . TTTGT . . . . . . . . . . T . . . ATCGTA G . . . . . . . . . . . AGT . . G . . A G . . N N NNAA . TGA . GA . . . . A
blockSeqs : . . . . . AGTCACACACAC . . . A . . . . . ATAATTTCT . . G . . . . . . A . . . . . A . . G . . . . . . . C . . . . . . . . . T AACAAAACA C . G T . . . . G GTG . GTAAAG . . . TG T AAAA G . C . . . . . . . . A GATACC ACGT . . . . . T . . A T A TCCTTAA A . . . T . G . G . . . G . TTAT A . C . . G . . . . . TTT . . . . . . . . . . T . . . . . . . . . . G . . . G . . . . GG . . . . .
blockSeqs : . . . . AGTCACACAC . . . T . . . . . ATTTCA . . T . . . . . . A . . . . . A . . A . . . . . . . C . . . . . . . . . A CCAACAAT . . . . . . . . . CAG . GTAA . . . TG . AAA G . . . . . . . . . . . TA GAT . . . . . . . . C T T G A . . . A . G . G . . . T . AT . . C . . A . . . . . TT . . . . . . . . . . . . . . . .
blockSeqs : . . AGTCCCCCC . . . . . . . . . ATT . . . . . . . . . A . . . . . . . . . . . . . . . . T . . . . . . . . . T CCAACAA . . . . . . . . . . GTA . . . TG . AAA . . . . . . . . . . . G TT . . . . . . . . . . . . A . . . T . . . G . . . . . A . . T . . C . . . . . . . . . . . . . . . . . . .
blockSeqs : . AGTCCTCC . . . . . . . . . ATC . . . . . . . . . T . . . . . . . . . . . . . . . . G . . . . . . . . . . . . . G GT . . . . . . . . . . . . . . . . . . . . G . . . . . . . . . . . . . . . . . . . . . . . . .
blockSeqs : . CTCTCC . . . . . . . . . TTC . . . A . . . . . . . . . . . . . . . . . . .
blockSeqs : . GTCCAC . . . .
blockSeqs : . . .
blockSeqCons : CCTTTTAAAAAACAA************* C* GCG************** GAAGCACGTA****** T**** TTGTCA***** ** AAGTCGTANGG***************************** G* N* ** G**** NA******* TCTTCA**** TGG************ GA********
originalCons : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-NGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANA------C----C-----AACAAC-AACAAAAAT-CACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGATAG-----CTT--GCGGTGT-TTATG-AAAGCACATTGTA-AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-G-TCAAGTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAA------------A---AAT----------TCG--GG-T-GGTGGTACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-ATCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT-AT-------A-CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTTAATCTTN-TCATAA--------TTTTTT-------T-G----AGGGGA-GGGGG---A-----TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
finalCons : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A--------------T-------------T------AATC-G--------GGAC-T---G--TC-TGACAA-------A-CACT-NGTA-TATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATT-CGATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAA------------AAAT-----AAATA-------AA-TAA--------AAANACCTTTTAAAAAACAA-------------AAAATC-ACAT--GTGTTTGATT---TCTG-AAAAT-ATAT-TGG--GTCGGCGCGGCG--------------GTGT-TTATGAAGCACGTA------AAGTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-ATTGTCA-----GTCAAAACCA-CA-A-TG-GACAATG-C-AAA-AT-CGATATAT-TAC--GAGCGG--NATTAAAAG-ATC-GACGTCGGATT--AAAAAAAGTCGTANGG-----------------------------GTG-TACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGCN-TCTTCATA-A-GC-GGTAAT--TTTTAAAAG----C-TTGGCTAAAAGTAGGAAA-AT-ATNA-------CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATTTTTCTTCA----TCATAA--------TTTTTTTGG------------GGGGA-GGGGGA--------TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): TGTATTACGGGTAATTAGTATTTAGTTACATATGAATTCTCTCTCTTAAAATTATCTGAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 22222222222 11111 666666666666666666666666666666666666666666666666666 5555555555555555555555555555555555555555555555555555555555 999999999999999999999999999999999999999999999999999999999 22222222 1111111 333333333 11111 11111 11111 1111111 222222 111 1111 555555555555555555555555 555555555555555555 11111 111111111 6666666666666666666666666666666666666666666666666666666 555555555555555 22222222222 22222222222 555555555555555555 1111111 11111 2222222222222 22222 111111 4444444444444 11 7777777777777777777777777777777777 1 111 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111 222222 11 11111 1 66666666666666666666666 222 11111111111111 333333333333333 2222222222 111
lowQualScore : 3 33 33333333333 5 11111 5 0 6 777777777777777777777777777777777777777777777777777 0 3 8888888888888888888888888888888888888888888888888888888888 77 3 44 9 55 3 3 55 55 000000000000000000000000000000000000000000000000000000000 4 66666666 3 666 4 55 4 1111111 3 44 3 666 7777 3 55 5 111111111 55 1 4 4 4 00000 4 777 00000 00000 4 66 66 8 0 4 777 4 4444444 4 1 777777 1 555 6666 4 66 4 9999 66 1 99999 4 4 4 66 66 444444444444444444444444 0 5 4 666666666666666666 4 4 00000 55 777777777 3 8888888888888888888888888888888888888888888888888888888 7777 66 333333333333333 0 8888 4 4 8 4 88 3 3 3 7 44444444444 33333333333 777 4 55 4 55 0 2 8888 4 2 99999 55 333333333333333333 2 3 7 3 2 55 444 1111111 1 3 7777 777 11111 1 4444444444444 1 0 4 1 00000 111111 3 4 4 4 4 4 1111111111111 4 4 4 4 8 4 4 4 00 5 5 77 888 5 5 77 5555555555555555555555555555555555 3 6 6 6 111 6 99 6 99 2 0 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 0 5 77 222 8 000000 33 8 11111 5 1 1 66 5 66666666666666666666666 1 5 0 111 88888888888888 333333333333333 4 5555555555 4 66 4 5 666
lowQualScore : . .. ........... . ..... . . . ................................................... . . .......................................................... .. . .. . .. . . .. .. ......................................................... . ........ . ... . .. . ....... . .. . ... .... . .. . ......... .. . . . . ..... . ... ..... ..... . .. .. . . . ... . ....... . . ...... . ... .... . .. . .... .. . ..... . . . .. .. ........................ . . . .................. . . ..... .. ......... . ....................................................... .... .. ............... . .... . . . . .. . . . . ........... ........... ... . .. . .. . . .... . . ..... .. .................. . . . . . .. ... ....... . . .... ... ..... . ............. . . . . ..... ...... . . . . . . ............. . . . . . . . . .. . . .. ... . . .. .................................. . . . . ... . .. . .. . . ................................................................................................................ . . .. ... . ...... .. . ..... . . . .. . ....................... . . . ... .............. ............... . .......... . .. . . ...
lowQualScore : 2 88 88888888888 0 11111 7 1 7 222222222222222222222222222222222222222222222222222 1 3 1111111111111111111111111111111111111111111111111111111111 33 1 22 1 00 6 6 00 00 888888888888888888888888888888888888888888888888888888888 0 00000000 2 444 0 55 0 8888888 6 66 6 444 7777 6 00 8 444444444 55 6 0 0 0 00000 0 000 00000 11111 0 11 11 9 1 4 888 4 4444444 4 0 000000 8 666 1111 4 11 4 4444 11 1 66666 4 4 4 11 11 444444444444444444444444 1 0 4 444444444444444444 0 0 00000 00 000000000 6 2222222222222222222222222222222222222222222222222222222 9999 11 222222222222222 8 5555 0 0 0 0 66 6 6 5 3 88888888888 66666666666 000 0 55 0 55 7 2 5555 0 2 44444 66 444444444444444444 6 6 3 6 3 00 111 8888888 4 3 7777 000 77777 1 3333333333333 6 6 0 6 00000 555555 2 0 0 0 0 0 5555555555555 0 0 0 0 0 0 0 0 22 7 7 99 999 7 7 99 0000000000000000000000000000000000 3 7 7 7 777 7 22 7 22 5 0 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 8 7 11 777 4 777777 66 4 66666 7 4 7 00 7 55555555555555555555555 0 0 9 222 22222222222222 888888888888888 4 8888888888 4 11 0 0 444
consensus : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTN-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATTC-GATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAAA-A---AT-AAATAA-------A-TAAAAATATTTT--TTAAAA---AAC-A--A-A--AAAT-CA----CAT--GTGTTTGATTT---CTG-AAAATA-TAT-TGG--GTC--GGC----GC--------------G---GCGGTGT-TT-ATG--AA-G--CAC-T-G---TAAA-GTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-GTC--A-GTCAAAACC-ACA-A-TG-GACAATG-CAAA-A-T-CGATATAT-TA-C--GAGCGG--NATTAAAA-GATC-GACGTCGGATT--AAAAAA--------------------AATCGT---AAG--GGT-G-TACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-NTCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT----AT---------NA------CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTATATT-TTTCTTCGTCATAA--------T-----TTTTT-------T-GG----GGGGA-GGGGG---A-----TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
Reference ( family-93 ) : AATGTGAAT--TGATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTATTT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACAC--ATGT-ATA--CGAATATATG--GGA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTN-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACGAT-AG-AATTC-GATAA-----TACA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAAA-A---AT-AAATAA-------A-TAAAAANACCTT--TTAAAA---AAC-A--A-A--AAAT-CA----CAT--GTGTTTGATTT---CTG-AAAATA-TAT-TGG--GTC--GGC----GC--------------G---GCGGTGT-TT-ATG--AA-G--CAC---G---TAAA-GTC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGCTAATCTGGG--T---T--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGA-G-G-ATAGC---AGACCCTTTGGCGGTG-TTTAAGAAAGAGCA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGTTTCC----CC-CAACAAAAGAAC----TAGAGTCCC-CGAG-TTCC--TAATC-C-G-GACGTCTAGCAAAGAAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TACGGGCG-G-TGTTT-A-G-AGAAGAAAA-TTGTTCCAAT-----GAACAG------TTCTCGAT-TTTACAAAA-ACTTA-TG-AAA-A-T-T-GTC--A-GTCAAAACC-ACA-A-TG-GACAATG-CAAA-A-T-CGATATAT-TA-C--GAGCGG--NATTAAAA-GATC-GACGTCGGATT--AAAAAA--------------------AGTCGT---ANG--GGT-G-TACAAAAAC-TCC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCATGTAC-ATATAAAAT-TAGC-NTCTTCATA-A-GC-GGTAAT--TTTTAAAA-G---C-TTGGCTAAAAGTAGGAAA-AT----AT---------NA------CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTNTATT-TTTCTTCATCATAA--------T-----TTTTT-------T-GG----GGGGA-GGGGG---A-----TAAAAATCCA-CAC--TTCAGGT-GCCTGTG-CTGAAA--CCAGGCCT
gi|1 : AATGTGAAT--TAATATGAAGTGAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAT-TTAGTACCTATTTAC-AGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTATCT-GATGAAA---------G-------TT-C--CC-----C-------------C------------ACAAAC--ATGT-ATA--CAAATATATG--GTA-G-AAAA--AG--C--------------A-------------T-------------T--------------AATC-G--------GGAC---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---C----AAT-GT--AAATTAATATG---------TGTT--TTCGACACGAT-AG-AATTC-GATAA-----TGCA-TG---TCAGGG-----TCAA-C---TAA-ACCG--CCTA--TT-TAAA-A---AT-GAATAA-------A-TAAAAAAACC-------AAC---AAC-AACA-A--AAATATA----CAT--GTGGTTGATCT---CTG-AAAATA-TAT-TGG--GTC--GGC----GCGATAGCAGCTCTTTG---GCGTTGT-TT-ATGA-AA-G--CAC---ATTCTAAA-ATC-CA-----CGCAAATTCG--GAGGG------T-TTTTTCGGCAA----------------------AA----------------------A-------AGAACTAATT---GCTCAGAG--TCCGCTAATCTGGGTAT---C--CA--CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAG-TATATT-AGATCGGG-GTG-ATAAC---AGACCCTTTGGTGGTG-TTTAAAAAATAACA---TTGTGA-AATCG--ATACAAA-TTCGA--AGGATTTCC----CC-CAACAAAAGAAC----AAGAGTCCC-CGAG-TTTCG-TAGTCTT-G-GACGTCTAGCAAATAAG-GTGT-GAA-TTGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TTAAAATACGGGCG-G-TGTTTGA-G-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TACTTGAT-TTTACAAAA-ACTTA-TG-AAA-A-TAT-GTCA-A-GTTAAAACC-ACA-A-TG-GAGAATG-C--A-G-T-CAATATAT-TA-C--GAGAGA--GATCAAAA-GATC-GACGTCGGATTAGAAAAAA--------------------AATATT---GGGTTGGT-GATACAAAAAC-TCC-CAT---A-CGATTT--TAGT-A--TTCGTA-TGATAGTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTCCTGTTCAT---T-ATAAAAAAT-TAGCAATCTTCATATA-TT-GGTCATA-TTTTAAAATG---C-TTGGTTAAAAGTAGGAAA-AT----ATNNNNNNNNNNN------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNCATAA--------T-----TTTTT-------TAGA----AGGGATGGGGGTTAA-----TAAAAATCCA-CAC--TTCAGGT-GCTTGTG-CTGAAA--CTAGGCCT
gi|10 : GAATTGAATGAA-----------AACAC-TCCACAAGTGATAAGGA-----TAT-TTAGTGTTTAATTAC-AGATGAG
gi|10 : TATTT-GATGAAA---------G-------TC-C--TC-----C------------------------------AC--ATGT-ATA--CGAATATATG--AGA-G-AAAA--AG--C--------------A-------------TCATTTCAAATTGTT--------------AATC-G--------G-AC---T-G--T--TGACAA-------A-CACTA-GTAT-ATC---C----AAT-GT--AAATTAGAATGCTGGTTT--TTTT--TTC-ACACGAT-AT-AATTC-GATAA-----TACA-TG---TCAGGC-----TCAA-C---TAA-ACCG--CCTT--TT-TAAA-A---AT-AAA-A-----------AAAAATATTTT--TTAAAAACCAAC-A--ATA--AAAC-CA----CTT--GTGTTTGACTT---CTG-AAAATA-TAT-TGG--GTC--GGC------------------------TCGGTGT-TT-ATG--AATG--CACATTG---TAAA-GTC-CA-----CGCATTTTCG--GAGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttgatgaaagtcctccacatgtatacgaatatatgagagaaaaagcatcatttcaaattgttaatcggactgttgacaaacactagtatatccaatgtaaattagaatgctggtttttttttcacacgatataattcgataatacatgtcaggctcaactaaaccgcctttttaaaaataaaaaaaaatattttttaaaaaccaacaataaaaccacttgtgtttgacttctgaaaatatattgggtcggctcggtgtttatgaatgcacattgtaaagtccacgcattttcggagga
gi|11 : gaattgaatgaaaacactccacaagtgataaggatatttagtgtttaattacagatgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaTTTGGATAC----CCGA-AAGA-GG-TG-T--AAA----TGTT-G-------------TA-----------TTTGACGAT----------AGAGCA---TTGTGT-ATTCC--ATGCAAA-ATCGA--AGGGTTCCC----C----ACAAA-GAAC----TAG-------CAA--TCCT--TAA-------GACTTCTAGCAAAAAAG-GTGT-GAA-ATGTA--TT-GGAGT-------CG-TG-AGATAC-----AGA---T------------------------A-AGGAGA---------CCAAT-----GAACAGAACAGTTTCTCGAT-TTTAAAAAA-ACTTA-TG-AAT-A-T-T--T------TCAAAACCAACA-A-TG-GACAGTG-CAAA-ATT-CG--ATAT-TA-G--AAGCGA--CATTAAAC-GATC-GACGTCGGGTT--AAATAA--------------------AATCTT---AAG--GGTGG-TATAAACACTTCC-CAT---ACCGA-AT--TAGTAA--TTAGTGTTAATAa
gi|12 : t--AA-G--CACAT-G---TAAA-GTC-AA-----CGCAAATTCG--GAGGG------G-GTTT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GGGTG-T--AAAA-TATATT-GGATCGGA-G-------------ACCCGTTGGCGTGG-TTTAAGAATCATCA---TTGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CC-C-ACAAAAAAAC----TAGAGTCCC-CGAGTTTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGT-GAA-A-----------AGT-------CGCCG-CGATACCGGTCAGA---TT----tta
gi|13 : gaaT-ATA--AA-G--CACTT-G---TAAA-GTC-AA-----CGCAAATTCG--GAGGG------G-TATT-CGGCAA----------------------AA----------------------A--------GAACTAAAG---GCTCTGAG--TCCGCTAATCTGGT--T---TTCCA--TTGTTTGACTTC----CGGA-AAGA-GG-TG-T--AAAAATATATTTGGATCGGC-G-----------AGACCCGTTGGCGGTGTTTTAAGAATCATCA----TGTGT-AATCC--CTGCAAA-TTCGA--AGGGTTTCC----CCACAAGAAAA-AAC----TAGAG-CCC-CGAG-TTCC--TAATC-CGG-GACGTCTAGCAAAGAAG-GTGTCGAA-A-----------AGT-------CGCCGCCGATAC----Caagaga
gi|14 : TGAAGTGAATGAA-----------AGTAC-TTCACATGTGATAAGGA-----TAT-TTAGTATTTATTTAC-ACACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------AAAATTAT----------------------------C-T--CT-----C-------------C-------------TACAC--ATGT-ATA--CGAATATATG--GGA-G-AACA--AG--C--------------A-------------T-------------T--------------AATC-A--------GAAC---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---A----AAT-TT--AGATT-ATTTT---------TTTT--TTCGGCACGAT-AA-AAATT-TATAA-----TACA-TG---TCAGGG-----TCAA-G---TAA-gtcaga
gi|15 : gACTA-------A-CATTT-GTAT-ATC---C----CAT-GT--AAATCGAAATG---------TTTT----CGCCACAGT-AG-AATTC-GATGA-----TAAC-TG---TCACGG-----TCGC-A---TCA-ACCG--CCTA--TT-TGAA-A---ATCAAAAAA-------A-TAAATAAAC--------AAA---AAC-A--A-AACAAAA-CA----CACTAGAGTTTGATAT---CTG-AAAATA-TAT-TGG--GTT--GGC----GC--------------GATAGCGG
gi|15 : --AAAA-TATATT-GGGTTGGC-GCG-ATAGC----GGCCCTTTGGCGATG-TCTATGAccctttggcgatgtctatga
gi|16 : actaacatttgtatatcccatgtaaatcgaaatgttttcgccacagtagaattcgatgataactgtcacggtcgcatcaaccgcctatttgaaaatcaaaaaaataaataaacaaaaacaaaacaaaacacactagagtttgatatctgAATGTGAAT--TGATATGAAGTGAAAGAA-----------AGCAC-TCTATATGTGATAAGGA------ATATTAGTATTTAATTAC-AGATGA
gi|16 : ttgacattgtatta--------AAAATTATTT-GATGAAA---------G-------TCAC--AC-----A-------------C------------ACACAC--Aannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttaaaattatttgatgaaagtcacacacacacacac
gi|17 : ttgacattgtattaaatgtgaattgatatgaagtgaaagaaagcactctatatgtgataaggaatattagtatttaattacagatgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttctcttTGTAC-ATTTAAAAAATAGT-ATCTGT-TA-A-GT-GGTAAT--TTT-AAAA-G---C-TTG-CTAAAGGTAG-AAA-AT----AT---------AA------CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN------AAAA--------T-----CTTTT-------------------G-GGGGG---A-----TAAAAATCCA-CAT--TTCAGGT-GCCTGTG-TTGAAA--CCAGGCCTc
gi|18 : A--------T-----TATTT-------T-TA----GAGGA-GGGGG---AGGTTTTAAAAATCCA-CAC--TTCAGGT-GCCCGT
gi|19 : tcaaaagcttgctaaaagtagaaactgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnac---T-G--TC-TGACAA-------A-CACTT-GTAT-ATC---C----AAT-GC--AAATTAAAATG---------TTTT--TTCCACCCGAT-AG-AATTC-GAAAA-----TGCA-TG---TCAAAG-----TCAA-C---TAA-ACAG--CTTA--TT-TAG---------AAATAA-------A-TAAAAATATTTA--TTAAAAACCAAC-A--A-A--AAAC-CA----CAT--GTGTTTG
gi|2 : ATT-TTT-GATGAAAAGTAGTGCAG-------TT-CTACA-----C-------------A------------ACACACT-ATGT-ATATTCGAATAT-TG--GGA-G-AAAA--AT--C--------------A-------------T-------------TCATTTAAAATCGTTAATC-G--------GAACATTTAG--TC-TG-CAAGACCAATA-TACTATGTATTATC---C----AAT-GTTAAGACTTAAATG---------TTTT--T-CGACACGATCAGTAATTCCGATTACGATCTACAGTGGGTCCAGGGCTTCTTCAA-CCTATGATATCGTTCGTA--TTATTAA-G---AT-ATATAACTTAAGAA-TAAAAATATTTTCTTTAAAG---AAG-C--A-A--CAAT-CA------T--GT-TTTGACTTAGTCTGCAAAATAACCT-TGGTTGTC--GGC----GC--------------G---GTGGTCT-AT-CTG--------TAC---------AA-GTC-CAGCATGCGCAAATTCG--GGGGG------T-
gi|2 : tcacattataatg--CTGTT-GACTTCACCTCCGACAAGATGGCTG-TT-GAAA-TATATT-GG-TCAGACG-G-GTGACCTTAGACCTTTAGAC-----TT----AAAGACCAGGCTTTTGTCAATCTTAATGCAAT-TTCGATTAGAG-TTCCAGAACC-TATCGAAAGATCAGTATAAAGTCT----AA-CTC----AGTC-C-GAGAGGTCT-----------GTGT---A-ATGTAATTT-G-ATTCCTGCTCCGCCG-AGATAC----C-GATAGTT----TACGGCCATT-TGTTT-A-G-Agtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|2 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattTGTTCATGTACCATATAAAAT--ACG-TTCTTCATA-A-GCAGGTAAT--TTTGAAAA-GGAGCGTTCGCTTAAA-TATGAAG-GT----AC---------GA------CTGCGCCGGATCACGAGTTATTTTAGATAATTTTTTTATTCTCTATT-TTTCTT-GTCATAA--------T-----ATCTTGGGGGGGG-GG----GGGGA-GGGGG---A-----TAAAAATCCA-CATTATTCAGGTGGCTTGAG-CTGAAA---CAGGCCTatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagttgttcatgtaccatataaaatacgttcttcataagcaggtaattttgaaaaggagcgttcgcttaaatatgaaggtacgactgcgccggatcacgagttattttagataatttttttattctctatttttcttgtcataatatcttggggggggggggggagggggataaaaatccacattattcaggtggcttgagctgaaacaggcctaa
gi|20 : tcacattataatgatttttgatgaaaagtagtgcagttctacacaacacactatgtatattcgaatattgggagaaaaatcattcatttaaaatcgttaatcggaacatttagtctgcaagaccaatatactatgtattatccaatgttaagacttaaatgtttttcgacacgatcagtaattccgattacgatctacagtgggtccagggcttcttcaacctatgatatcgttcgtattattaagatatataacttaagaataaaaatattttctttaaagaagcaacaatcatgttttgacttagtctgcaaaataaccttggttgtcggcgcggtggtctatctgtacaagtccagcatgcgcaaattcggggggtgtgtcagcttctcgtcctccaacaagaaaataccattaaatcatccaacaaacaggaaatcaaaacaagttaccaataccgctacagtcagagcggttgtttttgtagcttctgaacattctgttgacttcacctccgacaagatggctgttgaaatatattggtcagacgggtgaccttagacctttagacttaaagaccaggcttttgtcaatcttaatgcaatttcgattagagttccagaacctatcgaaagatcagtataaagtctaactcagtccgagaggtctgtgtaatgtaatttgattcctgctccgccgagataccgatagtttacggccatttgtttagaatacaacagaacagtattcaaagtttctccagagtactttcccccatcatatcttagaaaattggtcaggataacccgatatgatgagctagaaattgccatattatctcgattttattcacgcacaaacggagatgtttaaagtgttagactgtggattcaataattcgtaaaggagtggttacaatacaacttcgtatcgtgtttagtatttcgtttgctatattacctatttaggcctgagactggattagagagaagagagtagacgagaagcaggagagagagcgagtAATTATTT-GATGAAA---------G-------TC-A--CA-----CACA----------C------------ACACAC--ATGT-ATA--CGAATAT-TG--GGA-G-AAAA--AG--C--------------A-------------T-------------CATTTCA--------AATC-GTTAATC--GGAC---T-G--TC-TGACAA-------A-TACTA---AA-ATC---CTTAAAAC-AA--AAATTACAATT---------TTTaa
gi|21 : ATGTAATAAGGA-----TAT-TTAGTATTTATTTACAAGATGAGgtacaatatata
gi|21 : ct--------AAAATTATCT-GATGAAA---------GCACCCCTTC-C--CC-----CTCCCCGCACTCTAC------------ACCCAC--ATGT-ATA--CGAATATttctctttcttctttaaaattatctgatgaaagcaccccttccccctccccgcactctacacccacatgtatacgaatattata
gi|22 : ctatgtaataaggatatttagtatttatttacaagatgagttctctttcttctttT---CTA-AAAATA-TAT-TGG--GTC--GGC----GC--------------G---G---TTT-TT-ATG------------------TAA--GTC-CA-----CGCAAATTCG--GAGGG------T-GTCTTCGGCAA----------------------AAGAAAAAAAAAGAAAAACCAACAA-------AAAACTAAAG---GCTCAGAG--TCCGCTAATCTGtata
gi|23 : CG-AGATAC----CAGA---TT----TACGAGCG-G-TGTTT-A-GGAGAAGAAAA-TTGCTA-AAT-----GAACAC------TTTTCGAT-TTTACAAAA--CTT-----------------------TCAAAACC-ATA-A-TG-GACAATG-CAAA-A-T-CG
gi|24 : --------AAAATCATCT-GATGAAA---------G-------TC-C--CC-----CACTGATCCACCCAC------------ACACAC--ATCT-GTA--CGAGTATATA--GGA-G-AAAA--AG--C--------------A-------------T-------------C--------------A
gi|25 : tctctctctctctgtt--------AAAATTATTT-GATGAAA-----------------TC-C--CCTCCCTC-------------C------------TCACAC--ATGT-ATA--CGAATATACG--GGA-G-AAAA--AG--C--------------ATCATTTGAAATCGT-------------T--------------AATC-G--------GGAC---tttcaaatcga
gi|26 : tctctctctctctcAATGTGAATGTTGATATGTAGTGAATAAATTTTTTAAAAAGGCATATCCACATGTGATACGGA-----TAT-TTAGTATTT
gi|27 : ttgaacatggtactTCTATATT-TTTTTTT-TCATAA--------T-----CTTTTGTT----T-GG----GGGGA-GGGGG---A-----TAAAAATTCA-CAT--TTCAGGT-GCCTTTG-CTGAAA--CCAGGCCTgaatacgaa
gi|28 : -AGAAGAACA-TTGCTACAAT-----AAACAA------TTTCTGAT-ATTACAGAA-ACTTA-TG-AAA-A-A-T-GTTCAA-GTTAAAACC-ATACC-TG----AATG-CAAA-A-T-caagac
gi|29 : AAATTATTT-GATGAA----------G-------CC-C--CC-----C-------------CCCCTCCACACACACACAC--ATGT-ATA--CGAATAT
gi|3 : tctccctctctcttcAAATTATTTTGATGAA----------G-------TC-C--AC--------------------------------ACACAC--ATGT-ATA--CGAA-ATTTGTCGCA-G-AAAAGCAATTC--------------A-------------T-------------TTCA-----------AATC-GTCAGATGAGGAC---T-G--TC-GGACAA-------AATACTA-GTAT-ATC---C----AAT-GT--AAATT--AATG---------TTTTTCTTCGACACGAT-AG-AATTC-GATAA-----TACA-TG---TCAGGT-----AAAA-C---TAA-GTCG--CCTATTTT-TAAA-A---AT-AAATAA-------A-TAAAAATATTTT--TTAAAA---AACTA--A-C--AATT-CA----CAT--GTG--TGATTT---CTG-AAAATA-TAT-TGG--GTC--G------GC--------------T---GCGGTGT-TT-AT---------------G---TAAAGGTC-CA-----AGCAAATTCG--GATGG------T-GTTTTCCGCAA----------------------AA----------------------A-------A
gi|3 : tctctctctccctctcG---ACTCAGAG--TCCGCTAATCTGG------------------TTGACATC----CAGA-AAGA-GG-TG-TCCAATA-TATATT-TGATCATA-G-GGATACC---AGACC-TTTGACA-CG-T------AAGAGCA---GTGTGT-AATCC--ATGCAAAATTCGA--AGGGT--CC----CC-CAACAAAAGAAC-----AGAGTCCC-CGA--------------------------GCA-----G-GTGTTGAA-ATGTA--TT-G-AG--------CGGCG-AGATAC----CAGA---TT----TACGGCCG-T-TAT---------------A-TTGTTCCAAT-----GAATTG------TG-TCGAT-TTTACAAAA-TCTTAGTG-AAA-A-T-TTGT------TCAAAACC-ACA-A-TG-GTCAATGCCAAA-A-T-TG--ATCT-TACC--GAGCGG--GATTAAAATTATC-GGTGCCGGATT--ACAAAA--------------------A-TCGA---AGG--AGT-G-TACAAAAAC-TGC-CGT---A-CGATTT--TAGT-A--TTCGTG-TAAcccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|3 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCATGTAC-ATATAAAAT-TAGT-TTC-TCATA-A-GT--GTAAT--TTTTAAAA-A---C-TT-GCTAAAAGTAGAAAAGAT----AT---------TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNCATAATCTTTTTTT-----TTTTT-------T-GA----GG----GGGGG---G-----TAAAAATCCACCAT--TTCAGGT-GCCTGTGTCTGAAACCCCAGGCCTattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattatcatgtacatataaaattagtttctcataagtgtaatttttaaaaacttgctaaaagtagaaaagatattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttttttttttttgaggggggggtaaaaatccaccatttcaggtgcctgtgtctgaaaccccaggcct
gi|30 : tctctctctccctctcaaattattttgatgaagtccacacacacatgtatacgaaatttgtcgcagaaaagcaattcatttcaaatcgtcagatgaggactgtcggacaaaatactagtatatccaatgtaaattaatgtttttcttcgacacgatagaattcgataatacatgtcaggtaaaactaagtcgcctatttttaaaaataaataaataaaaatattttttaaaaaactaacaattcacatgtgtgatttctgaaaatatattgggtcggctgcggtgtttatgtaaaggtccaagcaaattcggatggtgttttccgcaaaaaacccccaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcagagtccgctaatctggttgacatccagaaagaggtgtccaatatatatttgatcatagggataccagacctttgacacgtaagagcagtgtgtaatccatgcaaaattcgaagggtcccccaacaaaagaacagagtccccgagcaggtgttgaaatgtattgagcggcgagataccagatttacggccgttatattgttccaatgaattgtgtcgattttacaaaatcttagtgaaaatttgttcaaaaccacaatggtcaatgccaaaattgatcttaccgagcgggattaaaattatcggtgccggattacaaaaatcgaaggagtgtacaaaaactgccgtacgattttagtattcgtgtaaattatattagcattaatatatatagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaaggaggagaaaattaAATG---AT--TAATATGAAGTGAATGAA-----------AACAC-TCCACGT---ATAAGAACAAGTTAT-TTCGTA-TTATTTAC-AGA
gi|31 : gTTTATATTATTTTTT----------------T-----TTTTT-------T-GGAGGAGGGGA-AGGGGTTTA-----CAAAAATCCA-CAC--TTCTGGT-GCCTG
gi|33 : -GG----AGGGA-GGGG-------------AAATCCA-TAC--TTCAGGT-GCATGTG-
gi|34 : ttagaaaGCAAATTCG--GAGGG------TGTTTTCCGGAAA----------------------AA----------------------A-------AGAAata
gi|35 : TGAA-TCAATGAA-----------AGCAC-TCCACATGTGATAAGGA-----TAagaaaaaaaac
gi|36 : agATGAAGTAAATGAA-----------AACAC-TCCAC--GTGATAAGAA-----CA
gi|4 : -------------C------------ACACAC--ATGTTATA--C-AATAT-TG--GGAAG-AAAA--AG--CCATCATTTCAAATCG-------------T-------------T--------------AATCCG--------GGAC---T-GCTTC-TGACAA-------A-TACTA-GTGT-ATTGGGC----AATTGT--AAAT--AAATGGGTATTTTATTTT--TT--------T-TG-AATTC-GATAA-----TA-A-TC---TCAG-------TCAAAC---TAA--TCG--CCTA--ATATTAA-A---AT-AAATAA-------AATAAAAATATGTT--TTAAAA---AAC-T--A-A--CA-T-CA----CAG--GT-TTGGAT---------GAAATA-TATCTGG--GTC--GGC----GC--------------G---CAGGTATGTT-ATG--TA---------------AAA-GTCACA------ACAAA--CGAAGAGGG------TGTTTTTCCGCAACCAAAAAAAAACCAAAAACAAAAA----------------------A-------AGAAACAAAACAAAC-CAAAGACTCCGCTAA-------------------CTGTT-GACTTC----CCGA-A-GA-GG-TGCT--AAAA-TATATT-G-ATTAGA-G---ATACC---AG-CCCTT-----GAG-TC----GAAGAGCA---TGATGT-AATCC--ATGCAAA-TT-GA--AGG----TC----CC-CAA-AAAAGAAC----TAGAGTTCC-C----------------------CG--------AGGAG-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATA-----CAGA---T----------GCG-GCCGTT------------AAA-TTGTT-CAAT-----GA--TG------TTC-CGATCTTTACAAAT-ACTTA-TG-AAA-A-T-T--------GTCAAAACC-ACA-A-TGCGACAATGCCAAA-A-TACGA-ATAT-TA-CGAGAGCGGGCAATTAAAA-GATC-GACGTC-GATT--CAAAAA-----------------------TGT---AA---GGT-G-TACAAAAAC-TTC-CGTTGGA-CGATTTAGTTGT-A--TTag
gi|4 : aTTCATGT-AATGTAC-ATATAAA---TAGT-TTCT-CATA-ATGC-GTTAAT--TTTTAAAG-C---C-TTTGCT-AAAGTA-GAAA-AT----ATANNNNNN--NN------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNCATAA--------TCTTTCTTTTT-------T-GG----GGGtattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggggtgcctgtgctggaaacccaggcctc
gi|4 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattGGT-GCCTGTG-CTGGAAACCCAGGCCTtgcctgtgctggaaacccaggcctc
gi|5 : acacacacatgttatacaatattgggaagaaaaagccatcatttcaaatcgttaatccgggactgcttctgacaaatactagtgtattgggcaattgtaaataaatgggtattttattttttttgaattcgataataatctcagtcaaactaatcgcctaatattaaaataaataaaataaaaatatgttttaaaaaactaacatcacaggtttggatgaaatatatctgggtcggcgcgcaggtatgttatgtaaaagtcacaacaaacgaagagggtgtttttccgcaaccaaaaaaaaaccaaaaacaaaaaaagaaacaaaacaaaccaaagactccgctaactgttgacttcccgaagaggtgctaaaatatattgattagagataccagcccttgagtcgaagagcatgatgtaatccatgcaaattgaaggtccccaaaaaagaactagagttccccgaggaggtgtgaaatgtattgagtcggcgagatacagatgcggccgttaaattgttcaatgatgttccgatctttacaaatacttatgaaaattgtcaaaaccacaatgcgacaatgccaaaatacgaatattacgagagcgggcaattaaaagatcgacgtcgattcaaaaatgtaaggtgtacaaaaacttccgttggacgatttagttgtatttattcattatatatataggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacattttcatgtaatgtacatataaatagtttctcataatgcgttaatttttaaagcctttgctaaagtagaaaatatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncataatctttcttttttgggTCT-GATGAAA---------G-------TC-C--CC-----C-------------C------------ACACACATATGT-ATA--CG--TATATG--GAA-GAAAAA--AG--C--------------A-------------TAATTTC-------T--------------AATC-G--------TTA------A--TCAGGATAT-------A-CACTT-GTAT-ATC---C----AAT-GT--AAATTAAAATG---------TTTT--TTCGACACAAC-AG------------------ACA-TG---TCAGGT-----TCAA-T---TAA-ACCG--TCTA--TT-TGAACATATAT-AGATAA-------A-TAAATAAA------TAAAAA---AAC-AACA-A--AAAC-CACAATCAT--GTGTTTGATAG---TTG-AAAATA-TAT-TTG--ATCTAGGCAACAGCAGTCCTTT------G---GCAGTGT-TT-GTG--AA-G--CACTTTG---TAAA-GTA-CA-----CGAAAATTCA--GAAGGTTTGTTT-TTTTTTGGCAA----------------------AA----------------------A-------AGAACTAAAG---GCTCAGAG--TCCGTTCATCTGGGTTT---T--CA--GTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCAGA-GCG-ATAGC---AGACCCTTTGGCGGCG-TTTAAGAAAGTGTA---TCATGT-AATCC--ATGCAAA-TTCGA--AGGGTTT-T----CC-CGACAAAAGAAC----TAGAGTCCA-AGAG-TTCCCTTAGCT-A-T-GACTTCTAGCAAAGAAG-GTGT-GAA-ATGTA--T------T-------CGGCG-ATATc
gi|6 : GT-ACA--CGAATATTTG--GGA-G-AAAA--AG--T--------------T-------------T-------------C--------------AA--------------A----T-G--TC-TGACAA-------G-CACTA-GTAT-ATC---C----AAT-GT--AAATTAAAATGTT-------TTTT--TTCAACACGAT-AG-AATTC-GATAA-----TACA-TG---TCAGGG------CAA-G---TAA-ATCG--CCTA--TT-TAAA-A---AT-AAATAA-------A-TAAAAATAGTTT--TT-AAA---AAC-T--A-A--CAAT-CA----CAT--GTGTTTGATTT---CTG-AAAATA-TA--TGG--GTC--GGC------------------------GCGGTGT-TTAATGTTAA-GTCCAC---C---GCAA-GTC-CA-----CGCAAATTCG--GGGGG------T-GTTTTCGGCAA----------------------AA----------------------ACAAAAACAAAACTAAA-----CT-AAA--------TAAT------------------CTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATT-GGATCGGAGG-G-ATAGC---AGA-CCTTTGAC-GT---------AAGAGCA---TTGTGC-AATCC--ATGCAAA-TTCGA--AGGGTT--C----CC-CAACAAAAGAAC----TAGAGTCCT-CGA----------------G-GACTTCTAGCGAAAAAA-GTGT-GAA-ATGTA--TT-G-AGT-------CGGCG-AGATAC----CAGA---TT----TAC-GGCG-A-T-----------CAGAAAA-TTGTTCCAATGAACAGAACAG------TTCTCGAT-TTTACAAAA-ACT-----------------------GTCAAAACC-GCA-A-TG-GACAATG-CAAATA-T-CGAtgagtcggtccgcgaataacg
gi|7 : -G-ATAAGAAAAATTGTTCCAATAAACAGAACAG------TTGTCGAC-TTTACAAAT-ACTTA-TGAAAA-A-T-T-GTC--A----AAAACC-ACA-ACTG-GACAATG-CAAA-A-T-CGACATACGTA-C----ACGG--GATTAAAA-GATCGGACATCGGATT--CAAAAA----------------------TCGT---AA-----T-G-TACAAAAAC-TTCACGT---A-CGATTT--TAGT-ATTTTC-TG-TAA
gi|7 : CTTTTCATGTAC-ATATAAAAT-GAGC--TCT-CATA-A-GTTGGTAAT--TTA-AAAA-G---C-T-GG-TAAATATTTGAAA-GTCNNNNN---------NN------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNTCTTCATGATAA--------T-----TTTT----------------GGGGA-GGGG----------TAAAAA-CCA-CAT--TTCAGGT-GCCTGTG-CTGAAG--ACAGGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcatgtacatataaaatgagctctcataagttggtaatttaaaaagctggtaaatatttgaaagtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttcatgataatttttggggaggggtaaaaaccacatttcaggtgcctgtgctgaagacaggcc
gi|8 : gataagaaaaattgttccaataaacagaacagttgtcgactttacaaatacttatgaaaaattgtcaaaaaccacaactggacaatgcaaaatcgacatacgtacacgggattaaaagatcggacatcggattcaaaaatcgtaatgtacaaaaacttcacgtacgattttagtattttctgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-TTCC--TAATC-TTG-GACGTCTAGCAAAAAAG-ATGT-GAA-CAGTA--TT-G-AGT-------TGGCG-AGATAC----CAGA---TG----TACGGGCG-G-TGTTT-AAG-AGAAGAAAA-TTGTTCCAAT-----AAACAG------TTATCGAT-TT-ACAAAATACTTA-TG-AAA-AAT-T-GTC--AAGTTAAATCT-ACA-A-TG-GAAAATG-CAAA-A-T-CGATATGT-TA-C--GAGTGA--TATCAGAA-GATC-GACGTCGGATT--AAAAAA--------------------AATCTT---A
gi|8 : agtATGTTC-ATGTAAAAT-TAGC-ATCTT-ATA------GGTAATGATTTTAAAA-G---C-TT-GCTAAAAGTAGAAAA-annnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagatgttcatgtaaaattagcatcttataggtaatgattttaaaagcttgctaaaagtagaaaat
gi|9 : agtttcctaatcttggacgtctagcaaaaaagatgtgaacagtattgagttggcgagataccagatgtacgggcggtgtttaagagaagaaaattgttccaataaacagttatcgatttacaaaatacttatgaaaaattgtcaagttaaatctacaatggaaaatgcaaaatcgatatgttacgagtgatatcagaagatcgacgtcggattaaaaaaaatcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagaaagagttagagagagagagagagagagAG---CCTCAGAT--TCTGCTAATCTGGG--TCATT--CAAATTGTTTGACTTC----CCGA-AAGA-GG-TG-T--AAAA-TATATA-GG-TCGGA-GTG-ATAGC---AGACCCTTTGGAGGTG-TTTAAGAAAGAGTA---TTGTGT-AATCC--ATGCAAA-TTCGA--AGGGGTTCC----CT-CCATAAAAAGA------AGAGTCCCGCGAGTTTCC--TAATCTT-G-GACGTCTAGCAAAAAAATGTGT-TAAGATGTA--TTCG-AGT-------TGGCG-AGATAC----CAGA---TT----TACGGGCA-G-TGTTTAA-G-AAAAAAACA-TTCTTTCAAT-----AAACAG------TTCTTGAT-TTTACAAAA-ACTTA-TG-AAATA-T-T-GTCA-A-GTTAAAACC-ACA-A-TG-GACGATG-CAAA-A-T-CAATATAT-TT-C--GTGTGA--TATTAAAA-GATC-GACCTTGGATT--AAAAAAGAACATTTACCAAATCAAACAGTTATGGGGTG--GGTGG-TTCAAAAAC-TCC-AGT---A-CGATTT--TAGT-A--Tt
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|32 ): TGTATTACGGGTAATTAGTATTTAGTTACATATGAATTCTCTCTCTTAAAATTATCTGAT