lowQualScore : 2222222222222222222222222222222222222222222222222222222222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111
lowQualScore : 7777777777777777777777777777777777777777777777777777777777 22 11 11 333333 11 1 33333 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1111 1 11111 111111 44444444444444444 333 1 3333333333 2 4444444444444444444 222222 111 1 111 11 3333333333333 444444444444444444444444444444444444444444444444444444444444444444444444444444444444 333333 4444444444 2222222 11111 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 111111111 1 333333333333333333 111111 333333 44444444444 1 111111 11111 000000000000000000000000000000000000000000 2222222 111 11 222222 11111 11111
lowQualScore : 7777777777777777777777777777777777777777777777777777777777 11 6 22 6 6 22 6 555555 22 7 6 22222 6 6 6 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 9999 5 6 5 0 3 5 22222 5 66 444444 11111111111111111 3 222 6 8888888888 7 6 2222222222222222222 888888 111 7 5 555 66 6666666666666 4 9 999999999999999999999999999999999999999999999999999999999999999999999999999999999999 0 0 888 11 55 1 999999 9999999999 3333333 22222 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 777777777 66 3 5 1 22 5 66 333333333333333333 0 6 888888 1 55 555555 777 777 9999 55555555555 5 66 6 5 444444 0 77777 999999999999999999999999999999999999999999 888 7777 3333333 000 5 44 99 3 11 333333 0 5 5 3 4 66666 4 0 2 3 55 22222
lowQualScore : .......................................................... .. . .. . . .. . ...... .. . . ..... . . . .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .... . . . . . . ..... . .. ...... ................. . ... . .......... . . ................... ...... ... . . ... .. ............. . . .................................................................................... . . ... .. .. . ...... .......... ....... ..... .............................................................................................................. . ......... .. . . . .. . .. .................. . . ...... . .. ...... ... ... .... ........... . .. . . ...... . ..... .......................................... ... .... ....... ... . .. .. . .. ...... . . . . . ..... . . . . .. .....
lowQualScore : 0000000000000000000000000000000000000000000000000000000000 00 0 00 0 0 00 0 000000 00 0 0 00000 0 0 0 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1111 7 5 0 0 6 0 55555 0 99 444444 77777777777777777 2 333 5 3333333333 3 2 8888888888888888888 888888 444 1 7 111 44 4444444444444 7 0 999999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 1 888 44 55 9 666666 3333333333 1111111 55555 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 3 888888888 99 4 0 4 11 6 99 666666666666666666 8 0 888888 5 55 555555 000 000 8888 44444444444 0 99 0 0 444444 4 22222 999999999999999999999999999999999999999999 888 4444 3333333 000 0 44 44 0 00 000000 8 4 0 1 2 66666 0 8 2 6 55 55555
consensus : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTT-----CTAGATTT---CT-------GGA--TGTATNAAGATTATCATGA-AATTTTA--CG-A-CAAT-C-----TTAA-------GACCGTCCT----AAG---TC--AC-GTT-G-CT-----T--GA---TG--TCCT-A----AG-A-----CT--G-----A-----G-----TCT----------T------A------TCCTAAG-ACATGT--CT-----N--------A-G-----TCCTAAGAC--A------------A--GGGTC--CT-G-G----TT---T-----T-CG-----AA---AG-TA-TCCTA----AG-NT-TGA---TCC-TAAGA--TA----TA-C-----TAT-CTTAG-GA-C---AC---G-TCTTAG-G---A---CA---GN-CT-----------T--AGGA-C-T--ATC-------T-----TAGGA-C--AATCGCAA-A--TTGTAAAT---------CAAAG--A--TGTCTT-AAGAT-TG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATT-GTCGTAAGATTATC--------A---TTT--TT-AC--ATCAT-TAT----ACGGG-TGAA--AAA-GTATTAT-A--ACAT-TAAATTTCAAA-CCAAA-------A-AA-T-GAAAATTCTTTTGA--AATCA-C--T-T-AGTTTAAT--ACATAAGANATG-A-AA----GGAA---ATAAT-TTGA-T-T-A-ATTTC-GGAAA-ATAACGAACATTT--ATTTCAAACTACG----ATATT----T-----CAAAAAA--AANT------ACAAAA-T-TAAAAAAA------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TT-A-TATTGCATGA--TTTTA-AAAATTGA-C-AATT-AT-----T-ATATGAT--A------TGTGA---G-GT---GAAATA-AAATAATTAT-TTAAGACATTTT---C-C-C--TTCACAATGTCAA-TTGAGA----A----G----A----CAAAT-A-TATTTTC--AACT-A-AA-T-AAA-TCAAAATGAAAT-AA---TA---CCANTATTGTTTGT---------TTGGTTTTG-TTTT----A-CGTAC--ATGTA-T----GN-ACA--TTA-TT---TTCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA--TTGG------AATGTA-----A----CATGTAC------AT-----TGTT--AT---A--AGGA--N-ANGT-AAT-GG-C-A-C--G--TT-AAAAA-TAATC----CC-C-AAACATTTGTCCGTGC-------T------G--------A-------TCGATACGTTT---------GTA--TAAAAGCAACGAAGATTAG--TTT---T--T-N--AAA--A-GTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATA-TC---GC---TACACGAAGTGG---AAAA---GAATAAG-C-TTACTC-TT--TAGCCGCCTCACTA------ACACCGCAA----CTAACG-------C-----A-C----GCA---------GCTCG--GNAAA---CTGT--GCTCACGAATTAA-----AACGCT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCAGAAGGAAAA-GGACCACATACA--TGA------ATAGCACAAAAAAGATTATCATAACTTTCGC--GACA-ATCCTAAGACC-ATCCTAAGAC--ATGTTGC-----TTGACG
Reference ( gi|1 ) : CAAACA----TTTTA--CAAAGTTCATAGATTAATGGGCGTGAACGTCTG-TATC---------TACGTACAATTTGCTCGTCATCCATATAGTCCAATGGGCTGTCCCTATCTCGAAATATTCTATTACGACGGACCTTGTGAGCTTGTCTTTGTAGTAGTAAGTAAACAGCAGCCATATTTGTTTTCG-TGTTTTGTCTTATATTTAGCCTCTAACACGGATCTGTATTAAGATTAT-ATGA-AATCTTA--TG-A-CATT-C-----TTAA-------GCCCGTCCT----AAG---TC--AT-GTT-G-CT-----T--GA---TG--TCCT-A----AG-A-----CT--G-----A-----G-----TCT----------T------A------TCCTAAG-ACATGT--TT-----C--------A-G-----TCCTAAGAT--A------------A--GGGTC--CT-G-G----TT---T-----T-CG-----AA---AG-TA-TCCTA----AG-TT-TGA---TCC-TAAGA--TA----TA-CATG--TAT-CTTAA-GA-C---AC---G-TCTTAG-G---A---CA---GA-CT-----------T--AGGA-C-T--ATC-------T-----TAGGA-C--AATCGCAA-A--GTGTAAAT---------CAAAG--A--TGTCTT-AAGAT-TG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTATGATTGGTCGTAAAATTATC-------TA---TTT--TTAAG--ATTA--TGT----A-GGG-TGCA--AGA-GTATTAT-A--A-AT-TAAATTTCAAAACCAAA-------A-AA-T-GAAAATTTCTTTTA--AATTA-C--T-TAAGTTTAAT--AGATAAGACATGTATAA----GAAAC--ATAGT-TTGA-T-T-A-ATTCCGGGAAA-ATAA-GAACATTT--ATTTCAAACTACG---CATATT----TTTGGCCAAAAAA--AACTG-----ATAAA----TAAAAAGAGAAGCCCCCCCCTCCTCCAAT------T-C------G---AATAAAAATTAG-TTAAATATTGCATGA--TTTTA-AAAATTGA-C-AATT-AT-----T-ATATGAT--A------TGTGA---A-TT---GAAATA-AAATAATTATATTAAGACAATTT---G-C-C--TTCACAATGTCAAATTGAGA----A----G----A----CAAAT-A-TAATTTT--AACT-A-AA-T-AAA-TCAAAATGAAAT-AA---TA---CAATTATTGTTTGT------CCGTTGGTTTTA-TTT-----A-CGTA---ATGT--T----GA-ATA-ATTAATT---TTCTATTAC------TTG-TTGTTTACATGTGAATAA---AGACACGCATGA--TTGG----GAAATGTA-----A----CATGTAG------AT-----TGTTG-AT---A--AGGA--A-AAGT-AAT-GG-C-A-T--G--TT-AAAAA-TAATC----C----GAACATGTGCC--TGC-------T------G--------A-------TCGATACGTTT---------GTA--TAAAAGCCACGAAGAGTAG--TTT---T--T-T--AAA--A-GTCATGCCACGAAATTCAATCCTGTGTGTCCAAGGAGCTGCA--GATA-T----GC---TACATGAAGTGG---AAAA---GAATAAGACTTTACTC-TT--TGGCCGCCGCACTA------ACACCGCAA----GTAACA-------C-----A-C----ACA---------GCTTG--AGAAA---CTGT--GCTCACGAATTGA-----AATGCT---GTCAACGATACAGACCATGTTAGGACGGTGGAGGAAATCAGAAGAAAAA-GGACCACATATA--TGA------ATAGCACAAAAAAGATTATCACAACTTTCGT--GACA-ATCTTAAGACC-ATCCTAAGAC--ATGTTGC-----TTGACG
gi|9 : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTT-----CTAGATTT---CT-------GGA--TGT-TTAACATTCT-AAAA-CATGTTACTTG-T-CGTT-CTCAGATTGA-------ATTCGATCTATTAAAG---AC--GCAGTC-G-----------AA---TG--TCTT-A----TA-A-----TTTAG-----ACAT--G-----TCC----------T------ACGACCATCCTAAG-AAATGT--CT-----C--------A-G-----TCCTAAGAC--A------------
gi|5 : attaagaggtaagaATAAAGATTATCAT-A-ACTTTCG--CA-A-CAAT-C-----TTAA-------GACCATCTT----AAG---AC--AT-GTT-G-CT-----T--GA---CG--TCct
gi|8 : caactaaaataaaatcaaaatgaatatacaagtattgtttggttttgttttacgtacatgtattcacatggattcttttctattacttgcttgtttccatgtgataaagacacgcatgattggaatgtacatgtacatactagtattgaagacaatataggcactggttcaaaaataatcccgccaaacatttgtccgtgctgatcgatacgtttgtatttaaaagcaacgaggagtagttttttttttaagtcatgccacgaaatccaacattgcgtgtccaaggagctgcacatattgctacatgaagtgggaatactcttttaaccgcttcactaacccgcaagtaacgcagcttaaaaagctaggtataaactgtgttcacgaattgaaacgctgtcaacgatacaaaccatgttaggactgcggaggaaatccgaaggaaaaggactacatacatgaatagcaaaAAGATTATCAT-A-ACTTTCG--TG-A-CAAT-C-----TTAA-------GACCATCCT----AAG---AC--AT-GTT-G-CT-----
gi|2 : tataaataatcccgccaaacatatgtccgtgctgatcgatacgtttgtataaaagcaacgaggagtagttttttacgtcatgccatgaaatccaatcttgcgtgtccaatgagctgcacagatattgcttcatgaagtggaaaagaaaaagtctttgcactttaccagcgtcactcacaccgcaggtatagtagcttggtaaactgtgttcatgaaatgaaatgctgtcaacgacacagatcatattaggacggtggaggaaatcagaaggaaaaggaccacgtacatgaataggacaaaaAAGATCA-----A-AATTTTC--TG-G-CA-----------AA------------TCTT----AAA---T---AC-GTT-G-CT-----T--GA---CG--TCCTTA----AG-A-----TT--G-----A-----G-----TCT----------T------A------TCTTTGG-AC
gi|11 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaTGATAATCTTA--CG-A-CAAT-C-----CTAA-------GACCATCCT----AAG---TCTAAC-GTT-G-TT----------------------A----GG-A-----C---------A-----A-----TCT----------T------A-----------AG-ACATCT--TT-----G--------A-T-----TT-----AC--A------------A-------------------TT---T-----G-CG-----A-----T-TG-TCCTA----AG-AT-AG----TCC-TAAGA--C-----------G--TGT-CCTAA-GA-T---AT---A-TCTTAG-G---AT--CA---AA-CT-----------T--AGGA-ggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|13 : gcctggttttcgaaagtaTGATAATTTTA--CG-A-CAAT-C-----CTAA-------GACCATCTT----AAG---T-------------T-----C--AA---TG--T--T-A----GG-A-----C---------A-----A-----TCT----------T------A-----------AG-ACATCT--TT-----G--------A-T-----T--TACAAT--------------------TTG--CT-A------TT---G-----T-CG-----TA---AGATAGTCCTA----GA-CT-TG----TCC-TAAGA--TA----TA---------T-CTTAG-GATC---AA---A--CTTAG-G---A---TA---aacttttgtttacatcatttttcgagtgaaatagtattataacattaaatttcaaaccaaaaaatgaaaattcttttgaaatcatctttagtttaatacatagaaatgggaaacaaataatattgatttaatttcgggaaatatcacttatttcaaactacgaaatatattt
gi|4 : gggcctggtttttgaaag-AATCTTA--AG-ATCGTTGC-----TTGA----------CGTCCT----AAGATTTA--AT-CTT-ATCA-----TGGGA---TGAATCCT-AACTTAGCA-----CT--A-----A-----G-----AC-----------C------A------TCCTAAG-GCATGT--CT-----C--------A-A-----TCCTAAGAC--ACTGTCGAAAATCA--GGGTC--CA-G-G----TT---T--------------AA---AG-aacttttatttttacatcgttttacgggtaaaagagtattataacattaaattaaatttaaacatattgaaatgggaaacaaataattttgatttaattccgaaaaatatatgtaacgaatatttatatatcagttatttcaaactacgaaatat
gi|6 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaaacattatcacaacattcgcgatA--TGTA-CACT-T-----TTAAAATTCATGCCCGTCTT----TAT---TC--AC-ATTAG-----------GA---TGA-TCTT-A----AG-A-----C---------------A-----TCT----------TTG----A------TT-TACA-ATTTGCGATT----------------G-----TCCTAAGAT--A-----------------GTC--CT-A--------------------------AC---AC-TG-TCCTA----AGACG-TG----TCC-TAAGA--TA-------------TAT-CTTAG-GATC---A----A-TCTTAG-G---A---aaattagtaatta
gi|3 : cctggggcctggttttcgaaagaaTAA-------GACCATCCT----AAG---AC--AT-GTT-G-CTAAAATT--GA---CG--TCCT-A----AG-A-----TT--G-----A-----A-----TCT----------T------A------TTTTTAG-Agtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|31 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaaCCATTCT----AAC---AA--AT-GCT-G-CT-----T--GG---CA--TCCT-A----AG-A-----TT--G-----A-----A-----TCT----------T------A------TCacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|11 : gattaacaccacaatatatcgaTCCT----AAG---T-------------T-----T--GA-------TCCT-A----AG-A------T--A------------------------------T------A------TCTTAGG-ACACGT--CT-----T--------A-GGACTATCTTAGGAC--A------------A-----TC--GC-A-A----AT---TGTAAAT-CA-----AA---GA-TG-TCTTA----AG-AT-TG----TCC-TAACA---------A-CGT---TAGACTTAG-GA-T---G----G-TCTTAG-G---A---TT---GT-CG-----------T--AAGA-T-T--ATC-------
gi|23 : gcctggttttcgaaagtaTCCT----AAG---T-------------T-----T--GA---T----CCT-A----AG-A-----T---------A------------------------T------A------TCTTAGG-ACAAGT--CTTAGGAC--------A-G-----TCCTAGGAT--aaacttttgtttacatcatttttcgagtgaaatagtattataacattaaatttcaaaccaaaaaatgaaaattcttttgaaatcatctttagtttaatacatagaaatgggaaacaaataatattgatttaatttcgggaaatatcacttatttcaaactacgaaatatattt
gi|19 : tggggcctggttttcaaaagtaT-----T--GAAAGTA--TCCT-A----AG-A-----TC--G-----A--------------------------------------TCCTAAG-ATAT----------------------G-----TCTTAAGAC--A------------A--GTGTtatcttacgacaatcgcaaattgtaaatcaactgtgtcttaagattgtcctaac
gi|2 : ggggcttggatgA---TG--TCCA-A----TG-A-----CTT-G-----A-----G-----TATGGTCCAAGACC------A------TCCTAAG-GCGAGT--TT-----C--------G-G-----TCCTAAGAC--A------------tgggacagtctgactatcttaggacaatcgttaattgtaaatntttgtaaacaaatgcgttttaaagaccctctaaacactaataaaaataa
gi|29 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttgacgtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacA---TG--TCCA-A----AG-A-----------------------------T----------C------A------TCCAAAG-ACATGT--TT-----C--------A-G-----TCACAAGA-----------------------------G-A----CT---T-----T-CG-----AA---Actttcgaaaaccagcctggggctctta
gi|9 : catgtcttatgacttaaac---TG--TCTT-A----GG-A-----CT--G-----A-----GACATTTCT----------T------AGGATGGTCGTAGG-ACATGT--CT-----A--------A-A-----TTATAAGAC--A-----------------TTCGACT-GCG----TC---T-----T-TA-----AT---AG--A-TC--G----AA-TT-CAA---T-C-TGAGA--AC----GA-CAAG--TA---------A-C---AT---G-TTTTAG-A---ATGTTA---AA-CA-----------TCCAGAA------ATC-------------TAGAA-C---ATCACAA-A--accagc
gi|21 : attaagaggtaagacaaacaatgcttttaaccaaattaaataaattaaaatgaatatatgatattctttgttgatacgtacaatttgaccgtcgtccatatagtccaataagttgtccctgtctcagaatattctattacgacgaacataattagctcatcttagcagttgaatgtaaataacagtcata---TA--TCCT-A----AG-A-----CT--G-------------------------------------A------CCCTAAG-ATATGG--AC-----A--------A-G-----T-CTAAGAct
gi|7 : gggacttggttttcaaacg---TG--TCCT-A----AG-ATAGCCCT--A-----A-----G-----AC-----------T------G------TCCAAAG-ACAT-T--------------------------TCCTAAAAT--A------------T--ATCTT--CT-A-GGC--TT---T-----T-CG-----AA---Agcaatcttaatactatctttgtaaatcaaagatgtcttaagattgtctttaaaaggttttaggattgtcgtaagattttcattttattattt
gi|6 : tggggattgga--TCCT-A----AG-A-----TT--G-----A--------------------------------------TCCTAAG-ATATAT--CT-----T--------A-G-----atcgtaaatcaaagctatctttgtcttgtcgtaagattatctgatatcacacttttttcgcatcattatacgaataaaaaaaagtatcatagcattaaaattaaaattcttttgaaatcactatacatttaatacagagaaatgggggaaaataaattttatcctggaaaataacgaccatatatacatttacaaaaaaatcaaacaaaaaaatccaccactttcagttgcataaaattatgaaaattaacaattattatatgatatgcgaggtgaaaataat
gi|23 : cctggggcctggttttcgaaagaa--TCCT-A----GG-A-----CT--GTCCTAA-----G-----ACT----------T------G------TCCTAAG-ATATAT--CT-----T--------A-G-----gacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatcctaatgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|29 : tggggcctggttttcaaaagtatcctaagtttgatcG-A-----CT--G-----AAACATG-----TCT----------TTGGATGA------TCTTTGG-ACATGT--TT-----A--------A-G-----TCATAAGAC--A------------ttatcttacgacaatcgcaaattgtaaatcaactgtgtcttaagattgtcctaac
gi|13 : ca-----CT--A-----A-----G-----TTT----------G------A------TCCTAAG-ATATAT--CT-----T--------A-G-----------GAC--A------------A--G--TC--TA-G-GACTATC---T-----TACG-----AC---AA-TA-GC--A----AA-TTGTAA---ATC-AAAGA--TG----T------------CTTAA-GA-T----T---G-TCCTA------A---CATTGAA-CT-----------T--AAGA-T-G--GTC-------T-----TAGGA-T--TGTCGTAA-A--AT-T--AT---------CAAAacaagagactttcgaaaaccagc
gi|3 : gggcctggtttttgaaagtatc-----G-----TTT----------T------A--------CTGAGGACATGC--AT-----A--------A-G-----TCATCAGACTGA------------ATTGAATC--CTAG-G----TTAGAT-----T-CGTTCTAAA---AA-TA-----A----GA-TT-CAA---TCT-TAGGA--CG----T--CA-----AT-TTTAGCAA-C---AT---G-TCTTAG-G---A---TG---GT-CT---------------------T--ATT-------T-----TATGA-T--AATCcttttatttttacatcgttttacgggtaaaagagtattataacattaaattaaatttaaacatattgaaatgggaaacaaataattttgatttaattccgaaaaatatatgtaacgaatatttatatatcagttatttcaaactacgaaatat
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaa------A------TCCTAAG-ACATGT--TG-----CTAAAATTGACG-----TCCTAAGAT---------------T--GAATC--TT-A-T----TT---T-----T-AG-----AA---CG-AA-T-CTA----A------------CC-TAGGA--Tcatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|21 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataagacc------A------TCCTAAA-ACCT-T--TTAAAGAC--------A-A-----TCTTAAGAC--A------------------TC--TTTG-A----TT---T-----A-CA-----AAGATAG-TA-T--TA----AG-AT-TGC---TCT-TA-GACTTG----TC-CAT----AT-CTTAG-GGTC---A----G-TCTTAG-G---A---TA---tcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|23 : gggacttggttttcaaacg-G-----TCGTAAGAT--A------------A-----TC--CT-A-G-------------------------G---AC-TG-TCCTA----AGACT-TG----TCC-TAAGA--TA----TA-------------------------------TCTTAG-G---AT--CA---AA-CT-----------T--AGGA-tgtcgtaagattttcattttattattt
gi|20 : tggggcctggttttcaaaagta-G-----TCCTAAGAT--A-----------------GTC--CT-A-A----T------------------------AC-TG-TCCTAC---AA-TT-TG----TCC-CAA-------------TATG--TAT-CTTAG-GG-T----C---GATCTTAG-G---A---TA---aatcgcaaattgtaaatcaactgtgtcttaagattgtcctaac
gi|3 : AAAT--A------------A--GGACC--CA-G-G----TT---T-----T-CG-----AA---AG-TG-TACGAGGATGG-TT-TTA----CT-GAGGA--CA----TG-CATA--AGT-CATCA-GA-CTGAATTGAA-TCCTAG-G---T---TA---GA-TTCGTTCTAAAAAT--AAGA-T-TCAATC-------T-----TAGGA-C---GTC---A-A--TTTTAG-----------C-AAC--A--TGTCTT-AGGAT-GG-T-C----Taatcataaattgtacatccaaaatgtcttaaaattgtccaagcatgattggaatgtacatgtacattgttatattaaagac
gi|39 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaata--A------------A--GGG-C--CT-G-G----TT---T-----T-CG-----AA---AG-TA-TCCTA----AG-atataattggagatta
gi|4 : --GGACC--CT-G-A----TT---T-----T-CG-----AC---AG-TG-TCTTA----GG-AT-TG----------AGA--CA----TG-C---------CTTAG-GA-T---G----G-TCTTAG-T---G---CT---AA-GT-----------T--AGGA-T-TC-ATC-------CCATGATAAGA-TTAAATCTTAG-G--ACGTCAAG---------CAACG--A----TCTT-AAGAT-TA-T-C----
gi|6 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaaacattatcacaacattcgc--GGGGC--CT-G-G----TT---T-----T-CG-----AA---AG-AA-TCCTA----AG-AT-TGA---TCC-TAAGA--TA----TA---------T-CTTAG-GA-C---AC---G-TCTTAG-G---A---CA---GT-GT-----------T--AGGA-C-T--ATC-------T-----TAGGA-C--AATCGCAA-A--TTGTAAAT---------CAAAG--A--TGTCTT-AAGAT-CA-TCC----TAAaggtttaaagaaattagtaatta
gi|23 : cct--GGGGC--CT-G-G----TT---T-----T-CA-----AA---AG-TA-TCCTA----AG-TT-TGA---TCC-TAAGA--TA----TA---------T-CTTAG-GA-C---AA---G-TCTTAG-G---A---CA---GT-CC-----------T--AGGA-T-T--ATC-------T-----TACGA-C--AATCGCAA-A--TTGTAAAT---------CAACT--G--TGTCTT-AAGAT-TG-TCC----TAAC--tgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|19 : t--GGGGC--TT-G-G----AT---G-----T-TG-----AA---AG-TA-TCCTA----AG-AT-CGA---TCC-TAAGA--TA-------------TGT-CTTAA-GA-C---AA---G-TGTTGG-G---A---CA---GT-CT----------------GA-C-T--ATC-------T-----TAGGA-C--AATCGTTA-A--TTGTAAATNTTTGTAAACAAAT--G--CGTTTTAAAGAC-CC-T-C----TAA
gi|21 : --GGGAC--TT-G-G----TT---T-----T-CA-----AA---CG-TA-TCCTA----AG-AC-TGA---CCC-TAAGA--TA----TG-----------------GA-C---AA---G-TCTAAG-A---G---CA---AT-CT-----------T--AATA-C-T--ATC-------T-----T---------------------TGTAAAT---------CAAAG--A--TGTCTT-AAGAT-TG-T-C----T--------------TT--AAAAGGTTTTAGGATT-GTCGTAAGATTTTC--------A---TTT--T------ATTA--Tacactaataaaaataa
gi|32 : --GGGGC--TT-G-G----TT---T-----T-CA-----AA---AG-TG-TTCTA----AG-AT-CTA---TCCTTAAGA--CA----tt
gi|36 : ctct--GGGTC--T----G----TT---T-----T-CG-----AA---AG-TA-TTCTA----AA--T-TGA---TCagtttta
gi|13 : tggaagcctgGGGC--CT-G-G----TT---T-----T-TG-----AA---AG-TA-TCCTA----AG-TT-TGA---TCC-TAAGA--TA-------------TAT-CTTAG-GA-C---AA---G-TCT------------------------------------AGGA-C-T--ATC-------T-----TACGA-C--AATAGCAA-A--TTGTAAAT---------CAAAG--A--TGTCTT-AAGAT-TG-TCC----TAA---CATTGA--ACTTAAGATGGTCTTAGGATT-GTCGTAAAATTATCAAACTTTTA---TTT--TT-AC--ATCGT-TTT----ACGGG-TAAA--AGA-GTATTAT-A--ACAT-TAAATT--AAATTTAAACATATTGA-AA-TGGGAAA-------CA--AATAA-T--T-TTGATTTAATTCCGA-AAAATATATGTAA----CGAAT--AT---------T-T-ATAT----------AT------CAGTT--ATTTCAAACTACG---
gi|11 : C--CT-G-G----TT---T-----T-CG-----AA---AG-TA-TCCTA----AG-TT-TGA---TCC-TAAGA--TA----TA---------T-CTTAG-GA-C---AC---G-TCTTA-----------------------------------GGA-C-T--ATC-------T-----TAGGA-C--AATCGCAA-A--TTGTAAAT---------CAAAG--A--TGTCTT-AAGAT-TG-TCC----TAACAACGTTAG--ACTTAGGATGGTCTTAGGATT-GTCGTAAGATTATC-------AAAC-TTTTGTTTAC--ATCATTTTT----C-GAG-TGAA--ATA-GTATTAT-A--ACAT-TAAATTTC-AAACCAAA-------A-AA-T-GAAAATTCTTTTGA--AATCATC--T-TTAGTTTAAT--ACAT-AGAAATG----G----GAAACAAATAATATTGATT-T-A-ATTTCGGGAAATAT------CACTT--ATTTCAAACTACGAAATATATT----Taaatat
gi|16 : gC--TT-G-G----TT---A-----T-CG-----AA---AG-TA-TGCTC----AG-AC-TGA---CGC-CAAGA--TA----T--------------------------C-----TCTTAGTA---A---CA---AA-TT-----------TT-AGGA-A-T--ATT-------G-----GAGGA-C--AATCAAGA-A--CTGTAAAT---------CTAAG--C--TGCCTT-ACGAT-TGTT-C----TGACAAAGCTGACCCTA--GGATGGTCTTAGAATT-ATTGCAAAATTTTC--------A---CTT--TT
gi|2 : a--CT-G-G----TT---T-----T-CG-----AA---AG-TG-TCTTA----GG-ttaca
gi|29 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttgacgtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggt--CT-G-G----TT---T-----T-CG-----AA---AG-TC-TCTTG----------TGA-----C-TGAA----------A-CATG----T-CTTTG-GA-T---G----A-TCTTTG-G---A---CA---TG-TT-----------T--AAG--------TC-------A-----TAAGA-C--Acctggggctctta
gi|7 : caT-G-G----AT---T-----T-CG-----AA---A---A-GCCTA----G----------------AAGA--TA-------------TAT-TTTAG-GA-A---AT---G-TCTTTG-G---A---CA---GT-CT-----------T--AGGG-C-T--ATC-------T-----TAGGA-C--AATC----------GTAAAT---------CAAAG--C--TATCT------T-TG-T-C----TTGT--CGTAAG--ATT-------ATC---TGAT--ATCACA-------C-------T----TTT--TTCGC--ATCAT-TAT----ACGAA-TAAAAAAAA-GTATCAT-A--GCAT-TAAA-----------------------A-T-TAAAATTCTTTTGA--AATCA-C--TATACATTTAAT--ACA-GAGAAATG---GG----GGAAA--ATAAA-TT---T-T-A---TCCTGGAAA-ATAACGACCATAT--AT---------------ACATT----T----ACAAAAAA--ATC---------AAA----CAAAAAAA------TCCACCACTTTCAGT------T--------G---CAT-AAAATTA----------------------TG-AAAATTAA-C-AATT-AT-----T-ATATGAT--A------TGCGA---G-GT---G----A-AAATAATc
gi|23 : tggggat-G-A----TT---G-----T-CG-----TA---AGATAATCCTA----GG-AC-TG----TCC-TAAGA-----------CTTG--T---CCTAA-GA-T---AT---A-TCTTAG-G---AT--CA---AA-CT-----------T--AGGA-
gi|20 : tggggcctggttttcaaaagta-TA-TCCTA----AG-AT-CGA---CCC-TAAGA--TA----CA-TAT---------TGG-GA-C---AA---A-TTGTAG-G---A---CA---GT-AT-----------T--AGGA-C-T--ATC-------T-----TAGGA-C--AATCATAA-A--TTGTACAT---------CCAAA--A--TGTCTT-AAAAT-TG-T-C----CAAG--CAT--G--ATT--GGAgcaaattgtaaatcaactgtgtcttaagattgtcctaac
gi|11 : A-TCCTA----AG-TC-TAACGTTGT-TAGGA--CA--------------AT-CTTAA-GA-C---A------TCTTTG-ATTTA---CA----A-TT-----------T--GCGA-T-T--GTC-------C-----TAAGA-T--AGTCCTAA-GACGTGT---C---------CTAAGATA--TATCTT-AGGAT-atgtacatgtacattgttatattaaagac
gi|6 : gcctggttttcgaaagtatcctaagtttgT-TG----TCC-TAAGA--TAGTCCTAACAC---TGT-CCTAA-GA-C---GT---G-TCCTAA-G---A---TA---TATCT-----------T--AGGATC-A--ATC-------T-----TAGGA-ggtcttaggattgtcgtaagattatcaaacttttgtttacatcatttttcgagtgaaatagtattataacattaaatttcaaaccaaaaaatgaaaattcttttgaaatcatctttagtttaatacatagaaatgggaaacaaataatattgatttaatttcgggaaatatcacttatttcaaactacgaaatatattt
gi|23 : cctggggcctggttttcgaaagaaT-TG----TCG-TAAGA--TA--------------AT-CCTAG-GA-C----T---G-TCCTAA-G---A---CTT--GT-CC-----------T--AAGA-TAT--ATC-------T-----TAGGATC--AAtcgcaaattgtaaatcaaagatgtcttaagatcatcctaatgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|19 : tggggcctggttttcaaaagtatcctaagtT-TG----TCC-TAAGA--TA----GT-CA-GACTGT-CCCAA-CA-C---TT---G-TCTTAA-G---A---CA---TATCT-----------T--AGGATC-G--ATC-------T-----TAGGA-T--ACTTTCAA-tcgcaaattgtaaatcaactgtgtcttaagattgtcctaac
gi|6 : ggggcttggatgATG---AT-CTTAA-GA-C---A------TCTTTG-ATTTA---CA----A-TT-----------T--GCGA-T-T--GTC-------C-----TAAGA-T--AGTCCTAACA--CTGT---C---------CTAAG--ACGTGTCCT-AAGATATA-T-C----Ttcgttaattgtaaatntttgtaaacaaatgcgttttaaagaccctctaaacactaataaaaataa
gi|8 : cctggggcctggttttcgaaagaatcctaagattgatcctaA-C---AT---G-TCTTAG-G---A---TG---GT-CT-----------T--AAGA-T-T--GTCACGAAAGT-----TATGA-T--AATCcctaatgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|27 : tataaataatcccgccaaacatatgtccgtgctgatcgatacgtttgtataaaagcaacgaggagtagttttttacgtcatgccatgaaatccaatcttgcgtgtccaatgagctgcacagatattgcttcatgaagtggaaaagaaaaagtctttgcactttaccagcgtcactcacaccgcaggtatagtagcttggtaaactgtgttcatgaaatgaaatgctgtcaacgacacagatcatattaggacggtggaggaaatcagaaggaaaaggaccacgtacatgaataggacaaaaaa--ATC-------T-----TAGGA-C--AATCGTAA-A--TTGTAAAT---------CAGAG--A--T-TCTT-AAGAT-TG-T-CCTAGTAAC-------G--A--------AGTCCTATGATT-GTCGTAAGATCATCACA----CA---TTT--TTtgct
gi|15 : TGGTATCAATATTG-TCGTAAGATT-----------------T--TTAAA--AATA--TATCTTTA-GGGATGAA--AAAAGTATTAT-AGCA-ATCTA--TTTCAAA--CAAA-------ATAG-T-GCAAATT-ATTTTACCGAT----------AGTTTCAT--A-------CAT-----------------ATAAT-TTGA-T-TTA-ATTTCGG-AAA-ATAACGAACATTT--AGATCAAgt
gi|22 : GATTG-TCGTTAGATCAGC-------AAACGTTT--TTACATCATTT--TAT------GGG-TGAA--AGA-GTATTATAA--A-AT-TAATATTC-AAGCCAAA-------A-AA-C-AAGTATTCTTTTGA--AATCA-CCGT-T-AGTTCAAA--ACATAAAA-ATGGAAAA----CAAAT--Attatttcaaaagatgaaatacgt
gi|2 : gA--AAA-ATATTAT-A--ACAT-TAATTTTCAAA--CAAC-------A-AATT-GAAAATTCTTTTGA--AATCA-CCGT-T-AGTTTTAT--GCAT---GCATGTAGAAATGGGGAA-----AAT-TAGA-TAT-A-GTTTC-AGAAA-ATAACGAACATTTTGATTTATATCAATG----ATATCAAAATATG---AAAAAA--CATTT-----ATAAAAGTTTAAAAA--------------TCCGTCAAT------T--------------------TCA--------ATTGCATGA--AATAA-AAAAAAGA-C-TATTAATACATGT-ATATGAT--A------TGTGA---G-GT---GAAAAT-AAATGATTAT-TTAAGACATTTT---T-CAC--TCCACAATGCC-AGTTGAGA----AGTACG----A----CAAACAA-TATTTTC--AACTAA-AA-T-AAA--CATATTAAAATAAA---TATGCCAATT-TTGTTTGC---------TAAAAATTG-CTT-----A--GTA---------T----GC-ACA-TCTATTT---CTCT-----------CTA-TTGTT----------TAA---AGACGCACATGA--TT-G----AAAATGCAC----ACGTTCATGTAT------AT-----TGTTATATC--A--AGGA--T-ATGT-AATGGG-CAA-TG-G--TTAAAAAA-GAAGC----CCACTAAACATTTACCCGTGC-------TTTTCC-GGAATATATA-------TCGATACG-AT---------GTA--TAAA----------ATTAT--TTTATAT--T-G--AAA--A-CTCGTGTCACTAAATCCAAACGTGCGTGCCCGATGAGCTGCG--GATATT----GC---TACACGAGGTGG---AAAT---GAATAAGACTTGAATC-TT--TAACCGCCTCACTA------ACATTGCAA----CTAACG-------CCGCTGA-A----AAG---------GATTG--GGAAA---C-AT---TTCACGAATCAA-----AACGCT---GTCAACGGTGCAGACCATGTTAGGACGGTAGACGAAATCAGGAAGAAAT-GGACCATATACA--TGATTACATGTAACACAAAAAAG---ATCAAAATTTTC-T--GGCA-A-----------ATCTTAA-AT--ACGTTGC-----TTGACGa
gi|4 : -T-T-A-ATTCCCAGAAA-AAAA-AAGCATTT--ATATCA--TT--------TATT----T----CCAAAAGACGAAATGCATTTACAAAATTGTAAAAAAAAA-------------TCCAAT-------------------------AACT---TCAA---TTGCATGA--GATTATAAAATTGA-C-CA--------------ATGCA--A------GGTAA---A--------AATA-AAATA-TTAT-TTAAGACATTTT---TTC-C--TTCACAATGTCAA--TGAGA----A----G----AAAGGCAAAC-AATATTTTC--AACTGA-AA-T-AAA--CGATATTAAAT-AAATATA---CCAGTAGTGTTT----------------TTTA---------A-AATA---ATATA-T----GC-ACA-------------CC-TTAC------TTGCTTGTTTACGTGTGAATAATAAAGACGAGCATGA--TTG------AAATGCA-----AGT--CATGTAC------AT------GTAC-AT---A------------GT-TAT-AT-C-A-A--G--TT-AAAG--TAA------------AACATTTA-----GC-------------------------------------CATTA---------GTA--TAAGA-CAACGAAGATTAG--TTT---T--T----------------GCCACGAAATCCA-TCTTATGTGTCCGAGGAGCTGCG--GATA-TT---GC---TACACAAAGTGG---AAAAAAAGAATAAGACTTTACTC-TT--TAGCCGCCTCACTA------ACACTACAA----CTAACG----------------------------------TCG--TTAAA---CTAT--GCTCACGAATT---------CGCT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCA--ACAAGAATGGACCACATATACATGA------A---CACAAAAAACATTATCACAACATTCGC--GATA-ATCTTAAGATC---------------GTTGC-----TTGACGtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|12 : CCCCCCCCCCCCCCAATAAAAACT-CCAAGCAA---AAAAAAAATCAGCTTCAAT--TGCATGAAATTTTA-AAAAT-GA-CCAGAT-AT-----T-ATATGAT--A------TGTGG---GGTT---AAAATA-AA-CGATTAT-TTAAGACATTTT---C-C-CCCTTCACATTATCAA-TTGAGA----A----GTAAGA----CAAAT-AATATTTTC--AACT-ACAA-T-AAAATCAAAATGAA-T-A----TA---CCAATATTGTTTGT------TGTTTGGTTTTG-TTTTATCTA-CATA----TGT--TTGCAGA-TCA-ATTC-TT---TTCTATTAC------TTTCTTGTTTACATGTGAATAA---AGATACGAATGA--Ttcctaagatttaatcttatcatgggatgaatcctaacttagcactaagaccatcctaaggcatgtctcaatcctaagacactgtcgaaaatcagggtccaggtttaaagaaattagtaatta
gi|3 : TTCAAT------TTC------GGAAAATAACAATCA--TT---TATTCAATTA--TTTCA-AAAGATGA-A-AAAC-AT-----TTACAAGATTGA------TTTGACCAA-TTATAGAGGTGCAAATAA--ATA-------AATTT---C-C-C--TTC-TAATATCAA-CTGAGACGTAA----G----A----AAGAG-A-TTTTTTTTCAACT-A-AAAT-AAA-TAAAATTGAAATGAA---TATACCAAT-ATTGTGTGTTAATAACTGCTAGTGTTT-TTT-----AACATATGCACAT--C----TA-GCC-CTTAATT---T-CTATGAC------TTGCTTGTTTACATATGAA-----------------A--TTAG------AATGCA----------CATGTAT------AT-----TGTTATATG--A--AGGA--ACAAGT-AAT-GGGC-AAT--GG-TT-AAAAAATAAGC-----------GCATAAGCC--CGCCAAACATT------C--------A-------TCCATGCTTTTCTCGAATATGTA--TAAAAACAACGAACATTAG--TTT---TCAT-T--AAA--AAGTCATGCCACGAAATCCAAACTTTCGTGCCCGAGGAGCTGCG--GGTA-TTACTACATGTACATGAAGTGGTCCAAAA---GAAT--------------T--TAGCCGCCTCACTACATGTAACACCGCAA----CTGATG-------C-----AGCTA--ACAAAAAAAAAAGCTTGC-GGAAA---CTGT--GCTCACGAATTAATTCACAGT-CTAGAGTCAACGATAAAGACCATGATAACACGGTGAACGAAATCAGAAAGAAAT-GGGCCACATACA--TGA------GTAGCATGCAAAAGATTATCATAA------------A-A---TAAGACC-ATCCTAAGAC--ATGTTGCTAAAATTGACGatattgttatactagtattgtggacaata
gi|28 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaaTTGCATAAAATTATG-AAAATTAA-C-AATT-AT-----T-ATATGAT--A------TGCGA---G-GT---GAAAtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|10 : aaaaaatcaaacaaaaaaatccaccactttcagGA--TTTTA-AAAAT-GATC-AATT-AT-----T-ACATGAT--ACATGTATGTGA---G-GT---GAAAAT-AAATAATTTT-TCAAGACA-TTT---C-C-CCCTTCACAATATCAA-TTGAGA----A----GTAAAA----CAAAT-A-T--TTTC--AACT-A-AA-----A-TCAAAATGAA-T-A----TA---CCAATATTGTTTG-------------GTTTTG-TTTT----A-CGTAT--ATGTA-T----GC-ACA--TCAATTCTTTTCTATTACATGTACTTGCTTGTTCACATGTGAATAA---AGACACGCATGA--TTGG------AATGTACATCTA----CATGTAG------AT-----TGTT--AT---ACTAGTATTG-AGGTCAATAGG-C-A-CTGG--TT-------CAATCCCATC----AAACATTTGTCCGTGC-------T------G--------A-------TCGATACATTT---------a
gi|18 : tgaTGA-CCAATT-AT-----T-ATATGAT--A------TGTGA---A-GT---A----A-AAATAAT---------ACATTTTCCCC-C-C--TTCACAATGTC-AATTGAGA----A----G----A----CAAATAA-TATTTTC--AACTAA-AA-TAAAA-TCAAAATG-AAT--A---TA---CCAATATTGTTTGT------TGTTTGGTTTTGTTTT-----A-CGTAC--ATGT--
gi|5 : aa--AACT-A-AAAT-AAAATCAAAATGAA-T-A----TA---CAAGTATTGTTTG-------------GTTTTG-TTTT----A-CGTAC--ATGTATT----CACATGGATTC-TT---TTCTATTAC------TTGCTTGTTTCCATGTGA-TAA---AGACACGCATGA--TTGG------AATGTA----------CATGTAC------ATACTAGTATTG-A-------AGAC--A-ATAT-A---GG-C-A-CTGG--TTCAAAAA-TAATC----CCGCCAAACATTTGTCCGTGC-------T------G--------A-------TCGATACGTTT---------GTATTTAAAAGCAACGAGGAGTAGTTTTT---T--T-T--TTA--A-GTCATGCCACGAAATCCAACATTGCGTGTCCAAGGAGCTGCA--CATATT----GC---TACATGAAGTGG---GAA---------------TACTCTTT--TAACCGCTTCACTA------AC-CCGCAA----GTAACG-------C-----AGCTTAAAAA---------GCTAGGTATAAA---CTGT--GTTCACGAATTGA-----AACGCT---GTCAACGATACAAACCATGTTAGGACTGCGGAGGAAATCCGAAGGAAAA-GGACTACATACA--TGA------ATAGCAAAATAAAGATTATCATAACTTTCGC--AACA-ATCTTAAGACC-ATCTTAAGAC--ATGTTGC-----TTGACGatgca
gi|24 : cT---TCCTATTGC------GTGCTTGTGTACATGTGAATAA---AGACGCGCACGA--CTAGTTCTGGAATGT------A----CATGCAtc
gi|6 : agctgcttagtttatttttaacgtatacacatccctcccATGTGAATAA---AGACGGGCATGAATTTTA----AAAGTGTA----------CATGTAGGCCCGTAT-----TGTT--ATTTCA--AGGA--C-AAGT-ATT-GGGC-AAT--GGTTC-AAAAA-TAACCTCGCC----AAGCATCTATCAGGGC-------TTTTTCGG--------ACCATCTTTCGATTCGTTA---------GTA--TAAAAGCAACGAAAATTAG--CTT---T--TATTGAAA--A-GTCATGCCACGGAATCCAAACTT-CACGTCCGAGGAATTGCG--GATATT----GC---TGCATGAAGTGG---Atgt
gi|20 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatcctaCAAGCATGA--TTGG------AATGTA----------CATGTAC------AT-----TGTT--AT---A--ttacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|17 : tatcctaagatcgaccctaagatacatattgggacaaattgtaggacagtattaggactatcttaggacaatcataaattgtacatccaaaatgtcttaaaattgtcGCATGA--TTGG------AATGTA----------CATGTAC------AT-----TGTT--AT---A--ttaaagac
gi|8 : aaT-ATAAA-TAATC----CCGCCAAACATATGTCCGTGC-------T------G--------A-------TCGATACGTTT---------GTA--TAAAAGCAACGAGGAGTAG--TTT---T--T-T--AC-----GTCATGCCATGAAATCCAATCTTGCGTGTCCAATGAGCTGCACAGATA-TT---GC---TTCATGAAGTGG---AAAA---GAAAAAGTCTTTGCAC-TT--TACCAGCGTCACTC------ACACCGCAG----GTA----------T-----A------GTA---------GCTTG--GTAAA---CTGT--GTTCATGAAATGA-----AATGCT---GTCAACGACACAGATCATATTAGGACGGTGGAGGAAATCAGAAGGAAAA-GGACCACGTACA--TGA------ATAGGACAAAAAAGATTATCATAACTTTCGT--GACA-ATCTTAAGACC-ATCCTAAGAC--ATGTTGC-----ttaaagacccgccatgaaaaagaaatattgtgtaaaaacaactttgtattgaaacaagcatgccatgaaacccaatcttccgtatcaaggagctgaagatattgctacacgaggttggaaagaataatatctat
gi|14 : TT---------GTA--TAAAAGCAACAAAGAGTAG--TTTCTGT--T-G--AAA--A-ACCATGCCAGGAAATCCAAAGATACGCGACCGGGGAGGTGAA--GACA-TC---AC---AACAGGGTGTGG---AAAA---GAATAAAATATTACCC-TTTATAGCCGCCTCAATA------ACTCCCCAACAATATAACAACCCCCCC-----C-C----CCC---------CCTCA--AAAAAAAGGTGG--G-----GAATTAA-----AACGCT---GTCTATGATACAG
gi|17 : aactacccctgcttttccgaaataTT---------GTG--TAAAAACAAC-----------TTTGTAT--T-G--AAACAA-G-CATGCCATGAAACCCAATCTTCCGTATC-AAGGAGCTGAA--GATA-TT---GC---TACACGAGGTTG---GAAA---GAATAAgattgtcgttagatcagcaaacg
gi|26 : aagcatgattggaatgtacatgtacattgttatattaaagacccgccatgaaaaagaaata---T--T-G--AAA--C-ATCATGCCACGAAATCAAA--ATACGTGTCTGAGGAGCTGCG--GCTA-TC---GC---TATATGAAGTAG---AAAC---AAA-----------TC-TT--TAGCCGCCTTACTA------ATACTACAA----tatctat
gi|25 : taGTGTCTGAGGAGCTGCG--GCTA-TC---GC---TACATAAAGTAG---AAAA---AAA-----------TC-TT--TAGCCGCCTCACTA------ATACAACAA----CTAACG-------C-------C----GC-------------TA--AAACA---CTGT--GCTGACc
gi|6 : aacatacA---------GCCTG--AGAAT---CTGTTGGTGGAAAAGTT-------AATGCC---GTCAACGACACAGA
gi|11 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatcctaatgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaAAAAGTTTG--ATAATCTT-AC--GACA-ATCCTAAGACC-ATCCTAAGTCTAACGTTGT-----
gi|13 : gcctggttttcgaaagtatcctaagtttgatcctaagatatatcttaggacacgtcttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagattgtcctAAAAGTTTG--ATAATTTT-AC--GACA-ATCCTAAGACC-ATCTTAAGgtttacatcatttttcgagtgaaatagtattataacattaaatttcaaaccaaaaaatgaaaattcttttgaaatcatctttagtttaatacatagaaatgggaaacaaataatattgatttaatttcgggaaatatcacttatttcaaactacgaaatatattt
gi|23 : gggcctggtttttgaaagtatcctaagtttgatcctaagatatatcttaggacaagtctaggactatcttacgacaatagcaaattgtaaatcaaagatgtcttaagattgtcctaacattgaaCGATTGTCGTAAGATA-ATCCTAGGACT-GTCCTAAGAC--TTGTatttttacatcgttttacgggtaaaagagtattataacattaaattaaatttaaacatattgaaatgggaaacaaataattttgatttaattccgaaaaatatatgtaacgaatatttatatatcagttatttcaaactacgaaatat
gi|9 : tggggcctggttttcaaaagtatcctaagtttgatcctaagatatatcttagg--GACATGTCCTACGACC-ATCCTAAGAA--ATGTcaaattgtaaatcaactgtgtcttaagattgtcctaac
gi|19 : attaagaggtaagacaaacaatgcttttaaccaaattaaataaattaaaatgaatatatgatattctttgttgatacgtacaatttgaccgtcgtccatatagtccaataagttgtccctgtctcagaatattctattacgacgaacataattagctcatcttagcagttgaatgtaaataacagtcatatttgtgatgttctagatttctggatgtttaacattctaaaacatgttacttgtcgttctcagattgaattcgatctattaaagacgcagtcgaatgtcttataattta-ATCCTAAGATCGATCCTAAGAT--ATGT--C-----TTAActcagtcctaagacact
gi|9 : ggggcttggatgttgaaagtTTAA---C-ATTCTAAAAC--ATGTTAC-----TTGTCGgacaagtgttgggacagtctgactatcttaggacaatcgttaattgtaaatntttgtaaacaaatgcgttttaaagaccctctaaacactaataaaaataa
6 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|30 ): AAAATTATTTAATCTCAATTCCTGAAAATAACGACACATTTATATCAATAGTTTCAAAAAGATGAAAACAT
Unaligned ( gi|33 ): CTAAATCATTTAACTTGAAATAAGTAATTAGTTAACACCAAGTGTCTCACAGA
Unaligned ( gi|34 ): GCCTGCCAAACATTTATCCGTGCTTTTCCGGGATGTTGTATAAAAGCAAC
Unaligned ( gi|35 ): TTGACCTTAGGATGATATTATAATTATTAAAATCTTCACTTTTT
Unaligned ( gi|37 ): AGTAAATGTTTATGGAAGATTTTTTTAATCAATATATTTT
Unaligned ( gi|38 ): AAATCACTAATACCACTCCGTTTAAATATCAGAGATAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 11 44444 1 333333333 444444 88888888888888888888888 2222222 55555555555555555555555555555555555555555555555 1111 22222222 2222222 1111 111111 111111 222222222222 444444444444 1111 111111111111 111111111 1 1111 66666666666666666 5555555555555555555 11111 1 33333333 1 444444444444444444444 1 11 111111 22222222222 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 22222 11111 111111 111 1111 111 3333333333333333333333 111 222 2222 3333 3333333333333333333333 2222222 66666666666666666666 111111 111111 33333333 1111111 333333333333333 1 44444444444444444444444444444444 55555555555555555555 2222222222222 111111 55555555555555 111111 99999999999999999999999999 111 111111 111 11111
lowQualScore : 3333 88 3 77 55555 3 5 888888888 3 3 4 3 4 4 4 4 888888 88888888888888888888888 0000000 2 5 77777777777777777777777777777777777777777777777 4444 33333333 1111111 77 66 5 0000 5 7777 777 222222 5 1 0 77 1 555555 66 555555555555 44 9 2 333 55555 1 2 2 666666 33 5 444 2 2 666666666666 5 444 0000 3 555555555555 33 2 44 333333333 3 3 0 0000 1 22222222222222222 4 0 2 4444444444444444444 4 11111 0 2 6 66 77 0 1 1 1 5 3 00 3 00000000 0 0 888888888888888888888 4 777 4 5 0 3 4 00 4 4 222222 1 55 11111111111 66 5 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 3 8 4 9999 22222 4 4 11111 222222 1 4 4 777 0 6666 1111 5 555 5 0000000000000000000000 777 1 5 5 222 0000 9 3333 1 5555555555555555555555 2 4 1111111 1 5 55555555555555555555 5 0 444444 777 666666 55 8 55555555 8888 2222222 66 4 4 222222222222222 3 5 1 5 7 77777777777777777777777777777777 44444444444444444444 888 55 3 0 0 1 1111111111111 111 4 55 4 000000 2 666 7777 99999999999999 66 4 222222 9999 00000000000000000000000000 3 555 66 888 3 4 77 77 000 2 6 1 4 99 999999 0 1 44 444 2 66666
lowQualScore : .... .. . .. ..... . . ......... . . . . . . . . ...... ....................... ....... . . ............................................... .... ........ ....... .. .. . .... . .... ... ...... . . . .. . ...... .. ............ .. . . ... ..... . . . ...... .. . ... . . ............ . ... .... . ............ .. . .. ......... . . . .... . ................. . . . ................... . ..... . . . .. .. . . . . . . .. . ........ . . ..................... . ... . . . . . .. . . ...... . .. ........... .. . .................................................................................................................................................. . . . . .... ..... . . ..... ...... . . . ... . .... .... . ... . ...................... ... . . . ... .... . .... . ...................... . . ....... . . .................... . . ...... ... ...... .. . ........ .... ....... .. . . ............... . . . . . ................................ .................... ... .. . . . . ............. ... . .. . ...... . ... .... .............. .. . ...... .... .......................... . ... .. ... . . .. .. ... . . . . .. ...... . . .. ... . .....
lowQualScore : 5555 00 0 00 55555 0 5 000000000 0 0 0 0 0 0 0 0 000000 55555555555555555555555 0000000 5 0 99999999999999999999999999999999999999999999999 2222 22222222 7777777 99 99 0 6666 0 0000 888 888888 0 4 1 99 0 000000 99 666666666666 22 7 1 777 33333 8 4 4 888888 22 0 444 5 5 333333333333 3 777 6666 0 000000000000 99 9 88 333333333 3 3 0 4444 3 99999999999999999 4 9 2 2222222222222222222 4 11111 1 2 7 99 99 7 4 9 4 7 0 44 4 44444444 0 2 999999999999999999999 4 888 4 0 2 3 4 66 4 4 888888 1 66 11111111111 11 1 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 0 6 9 4 4444 22222 4 4 11111 888888 4 4 4 777 1 6666 7777 7 777 7 3333333333333333333333 666 7 0 0 111 6666 4 0000 0 8888888888888888888888 9 8 2222222 0 0 44444444444444444444 0 1 444444 888 888888 55 0 00000000 5555 4444444 11 4 4 000000000000000 0 7 7 7 1 22222222222222222222222222222222 22222222222222222222 777 55 2 1 1 7 2222222222222 555 9 00 7 555555 5 444 9999 88888888888888 11 4 888888 4444 22222222222222222222222222 1 111 99 888 4 4 99 99 000 5 7 0 0 22 222222 3 0 77 777 5 77777
consensus : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGAT--GTATTAANATTATCATAAAATTTTAC--GACANTCTTAAGACCG---T----------C---CT----AAG---NCAC-GTTG-C-----TTG--ACG--TCCT-AA----G-ACT--GA---GTCTT------ATCCTAAG-ACATG--TCTCAGTCC-----TAAGAC--A------------A--GGGNCCT-GGTT---TTCG-----AAAGTATCCTAAGATT-G-A------TC--C-T---AAG-AT-ATAC---T--A--TCTTAG-GAC---AC---GTCTTAGGACAGTCT-----------TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT-TT-----TACATCATTTTAC-GGGTGAAAG-A--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA--C-GT--TA-GTTTAATACATG-----AGAAAT-G-G-AAGNAA-A---TAA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACAT-----------TT--ATTTCAA-CTACG----ATATTT-----CAAAA------A----A--AA----N-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AA----TTA-----T-T-ATATGA-----TA------TGCGAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----A------AG----A----CAAAT-AATATTTTCAACT-A-AAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-T--------CAA---TT----T-TCTAT------TACTTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGT-T-AT---A---AGGA--N-ANGT-AAT-GGGCAATGGTT-AAAAA---------TAA--TCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TGAA--AAGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGC------TACACGAAGTGG---AAAA---GAATAAGA----TT-ACTCTT--T-AGCCGCCTCAC------TAACACCGCAAC----TAACG-------CACGCT-A-AA-------AGCTCG-GNA--AA---CTGTGCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
Reference ( family-873 ) : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTTCT-----AGATTT-----CT-----GGAT--GTATNAAGATTATCATGAAATTTTAC--GACAATCTTAAGACCG---T----------C---CT----AAG---TCAC-GTTG-C-----TTG--ATG--TCCT-AA----G-ACT--GA---GTCTT------ATCCTAAG-ACATG--TCTNAGTCC-----TAAGAC--A------------A--GGGTCCT-GGTT---TTCG-----AAAGTATCCTAAGNTT-G-A------TC--C-T---AAG-AT-ATAC---T--A--TCTTAG-GAC---AC---GTCTTAGGACAGNCT-----------TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT-TT-----TACATCATTATAC-GGGTGAAAA-A--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA--C--T--TA-GTTTAATACATA-----AGANAT-G-A-AAGGAA-A---TAA-T-TTGA-T-T--AATTTC-GG-AAAA------TAACGA-ACAT-----------TT--ATTTCAAACTACG----ATATTT-----CAAAA------A----A--AA----N-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AA----TTA-----T-T-ATATGA-----TA------TGTGAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----A------AG----A----CAAAT-A-TATTTTCAACT-A-AA-T-AAA----TCAAAATGAAATAA---TACCANTATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGNACA-T--------TA----TT----T-TCTAT------TACTTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGT-T-AT---A---AGGA--N-ANGT-AAT-GG-CAC--GTT-AAAAA---------TAA--TCCC--CAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TNAA--AAGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGC------TACACGAAGTGG---AAAA---GAATAAG--C--TT-ACTCTT--T-AGCCGCCTCAC------TAACACCGCAAC----TAACG-------CACGC-------------AGCTCG-GNA--AA---CTGTGCTCACGAATTAA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCAG-AAGGAAAAGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCCTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|1 : CAAACA----TTTTA--CAAAGTTCATAGATTAATGGGCGTGAACGTCTG-TATC---------TACGTACAATTTGCTCGTCATCCATATAGTCCAATGGGCTGTCCCTATCTCGAAATATTCTATTACGACGGACCTTGTGAGCTTGTCTTTGTAGTAGTAAGTAAACAGCAGCCATATTTGTTTTCG-TGTTTTGTCTTATATTTAGCCTCTAACACGGATCTGTATTAAGATTAT-ATGAAATCTTAT--GACATTCTTAAGCCCG---T----------C---CT----AAG---TCAT-GTTG-C-----TTG--ATG--TCCT-AA----G-ACT--GA---GTCTT------ATCCTAAG-ACATG--TTTCAGTCC-----TAAGAT--A------------A--GGGTCCT-GGTT---TTCG-----AAAGTATCCTAAGTTT-G-A------TC--C-T---AAG-AT-ATACATGT--A--TCTTAA-GAC---AC---GTCTTAGGACAGACT-----------TAGGACT--AT-CTTAGGACAATCGCAAAGTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTATGATTGGTCGTAAAATTAT----CT-------A-----TT-TT-----TAAG--ATTATGTAGGGTGCAAG-A--GTATTATAA-ATTAAATTTCAAAACCAAAAAATGAAAATTTCTTTTAAATTA--C--T--TAAGTTTAATAGATA-----AGACAT-GTATAAGAAACA---TAG-T-TTGA-T-T--AATTCC-GGGAAAA------TAA-GA-ACAT-----------TT--ATTTCAAACTACGC---ATATTTTTGGCCAAAA------A----A--AA----C-----TGATAAA----T--AAAAAGAGAAGCCCCCC-CCTCCTCCAAT------T-C------G---AATAAAAATTAG-TTAAATATTGCATGA--TTTTA-AAAATTGA-C-AA----TTA-----T-T-ATATGA-----TA------TGTGAAT-TG-AAA-TAAAATAATTATATTAAGACAATTT--G-C-C---TTCACAATGTCAAATTGAG----A------AG----A----CAAAT-A-TAATTTTAACT-A-AA-T-AAA----TCAAAATGAAATAA---TACAATTATTGT---TTGTCCGT---------TGGTTTTATTT-ACGTA---ATGT-TGAATAAT--------TAA---TT----T-TCTAT------TACTTG-TTGTTTACATGTGAATAA---AGACACGCATGA------TTGGGAAA-TGTA-----A--C----ATGTA------GAT--TGT-TGAT---A---AGGA--A-AAGT-AAT-GG-CAT--GTT-AAAAA---------TAA--T--C--CGAACATGTGCC--TGCT------GA-------TC---GATACGTTTGTAT--AAAAGCCACGAAGAGTAGTTT---T---TTAA--AAGTCATGCCACGAAATTCAATCCTGTGTGTCCAAGGAGCTGCA--GATAT-GC------TACATGAAGTGG---AAAA---GAATAAGACT--TT-ACTCTT--T-GGCCGCCGCAC------TAACACCGCAAG----TAACA-------CACAC-------------AGCTTG-AGA--AA---CTGTGCTCACGAATTGA--AATG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGAGGAAATCAG-AAGAAAAAGGACCAC--ATATATGA------ATAGCACAAAAAAGATTATCACAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|10 : GA--TTTTA-AAAAT-GATC-AA----TTA-----T-T-ACATGA-----TACATGTATGTGAGG-TG-AAA-ATAAATAATTTT-TCAAGACATTTC--C-C-CC--TTCACAATATCAA-TTGAG----A------AGTAAAA----CAAAT-A-T--TTTCAACT-A-AA-----A----TCAAAATGAA-TA----TACCAATATTGT----------T---------TGGTTTTGTTTTACGTAT--ATGTATGCACA-T--------CAATTCTT----T-TCTATTACATGTACTTGCTTGTTCACATGTGAATAA---AGACACGCATGA------TTGG--AA-TGTACATCTA--C----ATGTA------GAT--TGT-T-AT---ACT-AGTATTG-AGGTCAATAGG-CACTGGTT---------------CAA--TCCCATCAAACATTTGTCCGTGCT------GA-------TC---GATACATTT
gi|11 : tgaCCT-GGTT---TTCG-----AAAGTATCCTAAGTTT-G-A------TC--C-T---AAG-AT-ATA----------TCTTAG-GAC---AC---GTCTTAGGAC----------------------T--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-CC---TAACAACGTTAG--ACTTAGGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------AAACTTTTGTT-----TACATCATTTTTC-GAGTGAAAT-A--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCATCT--T--TA-GTTTAATACAT------AGAAATGG-G-AAACAA-A---TAA-TATTGATT-T--AATTTC-GG-GAAA------T----A-TCAC-----------TT--ATTTCAAACTACGAAATATATTT-----
gi|12 : g-------CCC-CCCCCCCCAATAAAAACT-CCAAGCAA---AAAAAAAATCAGCTTC--AATTGCATGAAATTTTA-AAAA-TGACC-AG----ATA-----T-T-ATATGA-----TA------TGTGGGGTTA-AAA-T-AAACGATTAT-TTAAGACATTTTCCC-C-C---TTCACATTATCAA-TTGAGAAGTA------AG----A----CAAATAA-TATTTTCAACT-ACAA-TAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTATCTACATATGTTTGCAGA-T--------CAATTCTT----T-TCTAT------TACTTTCTTGTTTACATGTGAATAA---AGATACGAATGA------T
gi|13 : cccGGGCCT-GGTT---TTTG-----AAAGTATCCTAAGTTT-G-A------TC--C-T---AAG-AT-ATA----------TCTTAG-GAC---AA---GTCT-----------------------AGGACT--AT-CTTACGACAATAGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAA---CATTGA--ACTTAAGATGGTCTTAGGATTG-TCGTAAAATTAT----CAAACTTTTA-----TT-TT-----TACATCGTTTTAC-GGGTAAAAG-A--GTATTATAACATTAAATT--AAA-TTTAAACATA---------TTGAA------------------------ATG-----GGAAAC-A-A-A----------TAATT-TTGATT-T--AATTCC-GA-AAAATATATGTAACGA-ATATTTATATATCAGTT--ATTTCAAACTACG----AAATatattgttatactagtattgtggacaata
gi|14 : TTGTAT--AAAAGCAACAAAGAGTAGTTTCTGT---TGAA--AAACCATGCCAGGAAATCCAAAGATACGCGACCGGGGAGGTGAA--GACATCAC------AACAGGGTGTGG---AAAA---GAATAAAATA--TT-ACCCTTTAT-AGCCGCCTCAA------TAACTCCCCAACAATATAACAACCCCCCCCCCC-------------CCCTCA-AAA--AAAAGGTGGG-----GAATTAA--AACG--CT---GTCTATGATACAGat
gi|15 : aactacccctgcttttccgaaataTGGTATCAATATTG-TCGTAAGATT----------------------T-TTAAAAATATATC-TT-TAG-GGATGAAAAAA--GTATTATAGCAATCTATTTCAAA-CAAAATAGTGCAAATTATTTT------A--C--CGATA-GTTTCATACAT------------------------A---TAA-T-TTGATT-T--AATTTC-GG-AAAA------TAACGA-ACAT-----------TT--AGATCAA--T--------TATTT-----CAAAA------G----ATGAA----A-----T-ACgattgtcgttagatcagcaaacg
gi|16 : CTT-GGTT---ATCG-----AAAGTATGCTCAGACT-G-A------CG--C-C---AAG-AT-AT-C---T------CTTAGTAAC---A--------------AATTT-----------TAGGAAT--AT-TGGAGGACAATCAAGAACTGTAAAT---------CTAAGCTGCCTT-ACGATTGTT-C----TGACAAAGCTGACCCTA--GGATGGTCTTAGAATTA-TTGCAAAATTTT----C--------ACT---TT-TT-----TACAgt
gi|17 : aGCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGT-T-AT---A---
gi|17 : aaTTGTGT--AAAAACAAC-----TTTGTAT---T---GAAAC-AAG-CATGCCATGAAACCCAATCTTCCGTATC-AAGGAGCTGAA--GATATTGC------TACACGAGGTTG---GAAA---GAATAAttaaagacccgccatgaaaaagaaatattgtgtaaaaacaactttgtattgaaacaagcatgccatgaaacccaatcttccgtatcaaggagctgaagatattgctacacgaggttggaaagaataatatctat
gi|18 : aagcatgattggaatgtacatgtacattgttatattaaagacccgccatgaaaaagaaataTGA-CCAA----TTA-----T-T-ATATGA-----TA------TGTGAAG-TA-AAA-----ATAAT---------ACATTTT--C-C-CCCCTTCACAATGTCAA-TTGAG----A------AG----A----CAAAT-AATATTTTCAACT-A-AAAT-AAAA---TCAAAATGAA-TA----TACCAATATTGT---TTGTTGTT---------TGGTTTTGTTTTACGTAC--ATGTATGCAtatctat
gi|19 : aa--GGGGCTT-GGAT---GTTG-----AAAGTATCCTAAGATC-G-A------TC--C-T---AAG-AT-A------T--G--TCTTAA-GAC---AA---GTGTTGGGACAGTCT--------------GACT--AT-CTTAGGACAATCGTTAATTGTAAATNTTTGTAAACAAATGCGTTTTAAAGACCC-T-C----TAA
gi|2 : AAA-A--ATATTATAACATTAATTTTCAAA-CAACAAATTGAAAATTCTTTTGAAATCA--CCGT--TA-GTTTTATGCATGCATGTAGAAAT-G-G---GGAA-A-----A-T-TAGA-TAT--AGTTTC-AG-AAAA------TAACGA-ACAT-----------TTTGATTTATATCAATG----ATAT-------CAAAATATGAAA----A--AA----CATT--T-ATAAAAGTTT--AAAAA---------------TCCGTCAAT------T--------------------TCA--------ATTGCATGA--AATAA-AAAAAAGA-C-TA----TTAATACATGT-ATATGA-----TA------TGTGAGG-TG-AAA-ATAAATGATTAT-TTAAGACATTTT--T-CAC---TCCACAATGCCAG-TTGAG----A------AGTACGA----CAAAC-AATATTTTCAACT-A-AAAT-AAACATATTAAAAT-AAATA----TGCCAATTTTGT---TTGC---T---------AAAAATTGCTT---------A-GTATGCACA-TC-------TA----TT----TCTCT-C------TA-----TTGTTTA----------A---AGACGCACATGA------TTGA--AAATGCAC----A--CGTTCATGTA------TAT--TGT-T-AT---ATCAAGGA--T-ATGT-AAT-GGGCAATGGTT-AAAAAA--------GAA--GCCCACTAAACATTTACCCGTGCTTTTCCGGAATATATATC---GATACGAT-GTAT--AAAA----------TTATTTTATAT---TGAA--AACTCGTGTCACTAAATCCAAACGTGCGTGCCCGATGAGCTGCG--GATATTGC------TACACGAGGTGG---AAAT---GAATAAGA-C--TTGAATCTT--T-AACCGCCTCAC------TAACATTGCAAC----TAACG-------C-CGCTGAAAA-------GGATTG-GGA--AA---CATT--TCACGAATCAA--AACG--CT---GTCAACGGTGCAGACCATGTTAGGACGGTAGACGAAATCAG-GAAGAAATGGACCAT--ATACATGATTACATGTAACACAAAAAAGAT---CAAAATTTTC-TGGCAA----------ATCTTAA-ATACGTTGC-----TTGACGacactaataaaaataa
gi|2 : ATCA--AAATTTTCT--GGCAA----------A---T----------C---TT----AAA---T-AC-GTTG-C-----TTG--ACG--TCCTTAA----G-ATT--GA---GTCTT------ATCTTTGG-ACtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagTG--TCTT-AG----G-ACC--GA---AACTC------GCCTTAGG-ATG-G--TCTTGGACCATACTCAAGTC--A------------T--TGGACAT-G-TT---TTCG-----ATTGAGTTCTAAGTTA-GTA------TC--CGTCCAAAG-ATAAGAC---TCAA--TCTTAA-GG----AC---GTCggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttCT-GGTT---TTCG-----AAAGTGTCTTAGGA-------------C--C-G---AA-------AC---T-------------------C---GCCTTAGGATGGTCT-----------T-GGACC--ATACTCAAGTCActttcgaaaaccagcctggggctctta
gi|20 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttgacgtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaaTATCCTAAGATC-G-A------CC--C-T---AAG-AT-ACA----T--A--T--TGG-GAC---AA---ATTGTAGGACAGTAT-----------TAGGACT--AT-CTTAGGACAATCATAAATTGTACAT---------CCAAAATGTCTT-AAAATTG-T-C----CAAG--CAT--G--ATT--GGAcctggggctctta
gi|20 : GCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGT-T-AT---A---atgtacatgtacattgttatattaaagac
gi|21 : tatcctaagatcgaccctaagatacatattgggacaaattgtaggacagtattaggactatcttaggacaatcataaattgtacatccaaaatgtcttaaaattgtccaa--GGGACTT-GGTT---TTCA-----AACGTATCCTAAGACT-G-A------CC--C-T---AAG-AT-AT----------------G-GAC---AA---GTCTAAGAGCAATCT-----------TAATACT--AT-CTT---------------TGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----T--------------TT--AAAAGGTTTTAGGATTG-TCGTAAGATTTT----C--------A-----TT-TT--------ATTATTttaaagac
gi|22 : GGATTG-TCGTTAGATCAG----C--------AAACG-TT-TT-----TACATCATTTTAT-GGGTGAAAG-A--GTATTATAAAATTAATATTCAAG-CCAAAAAACAAGTATTCTTTTGAAATCA--CCGT--TA-GTTCAAAACATA-----A-AAATGG-A-AAACAA-A---TAA-t
gi|23 : --GGGGCCT-GGTT---TTCA-----AAAGTATCCTAAGTTT-G-A------TC--C-T---AAG-AT-ATA----------TCTTAG-GAC---AA---GTCTTAGGACAGTCC-----------TAGGATT--AT-CTTACGACAATCGCAAATTGTAAAT---------CAACTGTGTCTT-AAGATTG-TCC----TAAC--
gi|24 : tTGC---T---------TAGTTTATTTTTA-------ACGTATACACA-T--------CC----CTCCCTT-CCTAT------TGCGTGCTTGTGTACATGTGAATAA---AGACGCGCACGACTAGTTCTGG--AA-TGT------A--C----ATGCA------
gi|25 : agcAACATACGTGTCTGAGGAGCTGCG--GCTATCGC------TACATAAAGTAG---AAAA---AAA--------------TCTT--T-AGCCGCCTCAC------TAATACAACAAC----TAACG-------C-CGC-----------------TA-AAA--CA---CTGTGCTGACtgt
gi|26 : ---T---TGAA--ACATCATGCCACGAAATCAAAA--TACGTGTCTGAGGAGCTGCG--GCTATCGC------TATATGAAGTAG---AAAC---AAA--------------TCTT--T-AGCCGCCTTAC------TAATACTACAAC----
gi|27 : ta--AT-CTTAGGACAATCGTAAATTGTAAAT---------CAGAGAT-TCTT-AAGATTG-T-CCTAGTAAC-------G--A--------AGTCCTATGATTG-TCGTAAGATCATCACAC--------A-----TT-TT-----T
gi|28 : A------A----A--AA----A-----T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAAA------TTA--TG----------------AAAATTAA-C-AA----TTA-----T-T-ATATGA-----TA------TGCGAGG-TG-AAA-gt
gi|29 : CT-GGTT---TTCG-----AAAGTCTCTTGTGACT-G-AAACATGTC--T-T---TGG-AT-G---------A--TCTTTG-GAC---AT---GT-TTA----AGTCA-----------TAAGACa
gi|29 : cat--ATG--TCCA-AA----G-A------------TC------ATCCAAAG-ACATG--TTTCAGTC----------AC--A------------A--GAGAC------T---TTCG-----AAAc
gi|3 : catgtcttatgacttaaacAAAGAATTAAAATTCTTTTGAATTCA--CAGT--TA-GAATAATACACA------GAAAT-G-G---GGAA-AATTTGA-T-TTAA-T-TC-AATTTC-GG-AAAA------TAACAA-TCAT-----------TT--A-TTCAA--T--------TATTT-----CAAAAGATG--A----A--AAACATT-----T-ACAAGA--TT--GAaccagc
gi|3 : ataTTCAAT------TTC------GGAAAATAACAATCA--TT---TATTCAATTA--TTTCA-AAAGATGA-A-AAACATTTACAAGAT-TGATTTGACCAATTA------TA-GAGG-TGCAAA-TAAA----------TAAA----TTT--C-C-C---TTC-TAATATCAA-CTGAG----ACGTAAGAA----A----GAGAT-T-TTTTTTCAACT-A-AAAT-AAA----TAAAATTGAAATGAATATACCAATATTGT---GTGT---TAATAACTGCTAGTGTT-TTTTA---AC--AT--ATGCACA-TCTAGCCCTTA----AT----T-TCTAT------GACTTGCTTGTTTACATATGAA-----------------A------TTAG--AA-TGCA--------C----ATGTA------TAT--TGT-T-AT---ATGAAGGA--ACAAGT-AAT-GGGCAATGGTT-AAAAAATAAGCGCATAA--GCCCGCCAAACATTCATCCATGCT------TT-------TCTCGAATA----TGTAT--AAAAACAACGAACATTAGTTT---TCATTAAA--AAGTCATGCCACGAAATCCAAACTTTCGTGCCCGAGGAGCTGCG--GGTATTACTACATGTACATGAAGTGGTCCAAAA---GAA----------------TT--T-AGCCGCCTCACTACATGTAACACCGCAAC----TGATG-------CA-GCTAACAAAAAAAAAAGCTTGCGGA--AA---CTGTGCTCACGAATTAATTCACAGTCTAGAGTCAACGATAAAGACCATGATAACACGGTGAACGAAATCAG-AAAGAAATGGGCCAC--ATACATGA------GTAGCATGCAAAAGATTATCATAA----------AA---TAAGACCATCCTAAGACATGTTGCTAAAATTGACGtttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataagaccatcctaagacatgttgctaaaattgacgtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaaAT--GCA-AAAGATTATCATAAAA----------------TAAGACCA---T----------C---CT----AAG---ACAT-GTTG-CTAAAATTG--ACG--TCCT-AA----G-ATT--GA---ATCTT------ATTTTTAG-A-ACGAATCTAA--CC-----TAGGAtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagc---GTTTT------A--CTGAGGACATG--CATAAGTCA-----TCAGACTGA------------ATTGAATCCTAGGTTAGATTCGTTCTAAAAATA-----AGATTCA-A------TC--T-T---AGG-AC-GT-C---A--A--TTTTAGCAAC---AT---GTCTTAGGATGGTCT-----------------T--AT-TTTATGATAATCttcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaaAAAT--A------------A--GGACCCA-GGTT---TTCG-----AAAGTGTACGAGGATG-G-T------TTTAC-T---GAGGAC-ATGCA--T--AAGTCATCA-GACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATAAGATTCAAT-CTTAGGACG-TC---AATTTTAG-----------CAAC-ATGTCTT-AGGATGG-T-C----Tcatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|30 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataAA-A---TTA-T-TTAA-T-CTCAATTCC-TG-AAAA------TAACGACACAT-----------TT--ATATCAA--TA--------GTTT-----CAAAA------A----G--Aatataattggagatta
gi|31 : aGACCA---T----------T---CT----AAC---AAAT-GCTG-C-----TTG--GCA--TCCT-AA----G-ATT--GA---ATCTT------ATCtgaaaacat
gi|32 : gattaacaccacaatatatc--GGGGCTT-GGTT---TTCA-----AAAGTGTTCTAAGATC-T-A------TC--CTT---AAG-AC-A
gi|34 : ctctC--CAAACATTTATCCGTGCT------TT-------TCCGGGATG---TTGTAT--AAAAGCAACagtttta
gi|36 : gcctg--GGGTCT---GTT---TTCG-----AAAGTATTCTAA-ATT-G-A------TC--
gi|39 : tggaagcctg--A------------A--GGG-CCT-GGTT---TTCG-----AAAGTATCCTAAG
gi|4 : -T-T--AATTCCCAG-AAAA-------AAAAA-GCAT-----------TT--ATATCA--TT--------TATTT-----CCAAA------AGACGA--AA----TGCATTT-ACAAAA--TTGTAAAAAAA-------------------AAT------C-C----------AATAA----CT--TCA---ATTGCATGA--GATTATAAAATTGA-C-CA----------------------------A------TGCAAGG-TA-AAAATAAAATA-TTAT-TTAAGACATTTT--TTC-C---TTCACAATGTCAA-T-GAG----A------AG----AAAGGCAAAC-AATATTTTCAACTGA-AA-T-AAA-----CGATATTAAATAAATATACCAGTAGTGT---TT-----------------------TTTAAAATA---ATATATGCACA-C--------C-----------------T------TACTTGCTTGTTTACGTGTGAATAATAAAGACGAGCATGA------TTGA--AA-TGCA-----AGTC----ATGTA------CAT---GTAC-AT---A-------------GT-TAT-AT-CAA--GTT-AAAG----------TAA----------AACATTTAGCCAT-------------------------TA-----GTAT--AAGA-CAACGAAGATTAGTTT---T---T------------GCCACGAAATCCA-TCTTATGTGTCCGAGGAGCTGCG--GATATTGC------TACACAAAGTGG---AAAAAAAGAATAAGACT--TT-ACTCTT--T-AGCCGCCTCAC------TAACACTACAAC----TAACG----------------------------TCG-TTA--AA---CTATGCTCACGAATT------CG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCAACAAG--AATGGACCACATATACATGA------A---CACAAAAAACATTATCACAACATTCGCGATAATCTTAAGATC------------GTTGC-----TTGACG
gi|4 : AACATTATCACAACATTC-GC--GATAATCTTAAGATCG---TTGCTTGACGTC---CT----AAGATTTAAT-CTTATC-----ATGGGATGAATCCT-AACTTAGCACT--AA---GACC-------ATCCTAAG-GCATG--TCTCAATCC-----TAAGAC--ACTGTCGAAAATCA--GGGTCCA-GGTT---T--------AAAGtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagaccatcctaaggcatgtctcaatcctaagacactgtcgaaaatcagggtccaggtttaaagaaattagtaatta
gi|5 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaCAACT-A-AAAT-AAAA---TCAAAATGAA-TA----TACAAGTATTGT---TTG----------------GTTTTGTTTTACGTAC--ATGTATTCACA-TGGAT----TC----TT----T-TCTAT------TACTTGCTTGTTTCCATGTGA-TAA---AGACACGCATGA------TTGG--AA-TGTA--------C----ATGTA------CATACTAG-T-ATTG-A---AGAC--A-ATAT-A---GG-CACTGGTTCAAAAA---------TAA--TCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTATTTAAAAGCAACGAGGAGTAGTTT---T---TTTTTTAAGTCATGCCACGAAATCCAACATTGCGTGTCCAAGGAGCTGCA--CATATTGC------TACATGAAGTGG---GAA-----------------T-ACTCTT--TTAACCGCTTCAC------TAAC-CCGCAAG----TAACG-------CA-GCTTAAAA-------AGCTAG-GTATAAA---CTGTGTTCACGAATTGA--AACG--CT---GTCAACGATACAAACCATGTTAGGACTGCGGAGGAAATCCG-AAGGAAAAGGACTAC--ATACATGA------ATAGCAAAATAAAGATTATCATAACTTTCGCAACAATCTTAAGACCATCTTAAGACATGTTGC-----TTGACGaaattagtaatta
gi|6 : --GGGGCCT-GGTT---TTCG-----AAAGAATCCTAAGATT-G-A------TC--C-T---AAG-AT-ATA----------TCTTAG-GAC---AC---GTCTTAGGACAGTGT-----------TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATCA-TCC----TAAtc
gi|6 : cctATGTGAATAA---AGACGGGCATGAATT---TTAA--AAGTGTA--------C----ATGTAGGCCCGTAT--TGT-T-ATTTCA---AGGA--C-AAGT-ATT-GGGCAATGGTTCAAAAA---------TAACCTCGC--CAAGCATCTATCAGGGCTTTTTCGGACCATCTTTC---GATTCGTTAGTAT--AAAAGCAACGAAAATTAGCTTTTAT---TGAA--AAGTCATGCCACGGAATCCAAACTT-CACGTCCGAGGAATTGCG--GATATTGC------TGCATGAAGTGG---Atgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|7 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatcctaT-GGAT---TTCG-----AAA--AGCCTAG------------------------AAG-AT-ATAT---T-------TTAG-GAA---AT---GTCTTTGGACAGTCT-----------TAGGGCT--AT-CTTAGGACAATCG-------TAAAT---------CAAAGCTATCTT------TG-T-C----T---------------------TG-TCGTAAGATTA-TC-TGA---TAT----C--------ACACTTTT-TT-----CGCATCATTATAC-GAATAAAAA-AAAGTATCATAGCATT---------------AAAATTAAAATTCTTTTGAAATCA--C--TA-TACATTTAATACA-G-----AGAAAT-G-G-GGGAAA-A---TAA-A-TT---T-T---ATCCT-GG-AAAA------TAACGA-CCAT-----------AT--AT---------------ACATTT------ACAA------A----A--AA----A-----T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAA----A--TTA-----------------TG-AAAATTAA-C-AA----TTA-----T-T-ATATGA-----TA------TGCGAGG-TG------AAAATAATttacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|8 : tggggatT-ATAAA---------TAA--TCCCGCCAAACATATGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAGGAGTAGTTT---T---TTAC----GTCATGCCATGAAATCCAATCTTGCGTGTCCAATGAGCTGCACAGATATTGC------TTCATGAAGTGG---AAAA---GAAAAAG--TCTTT-GCACTT--T-ACCAGCGTCAC------TCACACCGCAGG----TA----------TA-GT-------------AGCTTG-GTA--AA---CTGTGTTCATGAAATGA--AATG--CT---GTCAACGACACAGATCATATTAGGACGGTGGAGGAAATCAG-AAGGAAAAGGACCAC--GTACATGA------ATAGGACAAAAAAGATTATCATAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----
gi|9 : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTTCT-----AGATTT-----CT-----GGAT--GT-TTAACATTCTAA-AACATGTTACTTGTCGTTCTC-AGATTGAATT----------CGATCTATTAAAG---ACGCAGTCG---------A--ATG--TCTT-AT----A-ATTTAGACATGTCCTACGACCATCCTAAG-AAATG--TCTCAGTCC-----TAAGAC--A------------
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33 ): CTAAATCATTTAACTTGAAATAAGTAATTAGTTAACACCAAGTGTCTCACAGA
Unaligned ( gi|35 ): TTGACCTTAGGATGATATTATAATTATTAAAATCTTCACTTTTT
Unaligned ( gi|37 ): AGTAAATGTTTATGGAAGATTTTTTTAATCAATATATTTT
Unaligned ( gi|38 ): AAATCACTAATACCACTCCGTTTAAATATCAGAGATAAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 11 22222 1 333333333 222222 22222 333333333333 22 1 55555555555555555555555555555555555555555555555555555555555555555555555 111111 111111 4444444444444 1111 111111111 1 66666666666666666 5555555555555555555 11111 11 111111 3333333333333333333333 1 11 111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111 111111 1111111111 111 1111 111 1111 222222222 1111 1 11111 33333 111 3333333333333333 2222222 444444444444444444444444 111111 111111 333333333 1111111 2222222 1111 11 1 2222222222 55555555555555555555 222 111111 444444444444444 111111 8888888888888888888888888888888888888888888888 1111 111111 11111
lowQualScore : 3333 88 1 22 55555 1 5 888888888 1 1 1 1 1 1 1 1 999999 66666 1 333333333333 77 5 1 8 7 0 88888888888888888888888888888888888888888888888888888888888888888888888 66 5 555555 4 1 5 2 5 555555 1 4 3 777 33 4 2 333 55555 1 2 666666 2 5555 9999999999999 5 444 4444 1 11 888888 77777 33 2 44 333333333 3 3 3 7777 1 22222222222222222 4 0 2 0000000000000000000 777 11111 5 0 5 0 33 0 33 1 5 3 00 3 666666 5 0 6666666666666666666666 4 66 4 5 0 3 4 00 4 4 222222 1 55 66 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 5 3 8 4 2 11111 4 4 9999 222222 9999999999 4 4 777 0 6666 1111 5 555 5 2222 666666666 0 5555 0 55555 3 3 22222 777 8888888888888888 2 4 1111111 5 444444444444444444444444 0 444444 777 666666 55 8 000000000 8888 2222222 66 4 4 4 2222222 4444 1 00 0 4 0 5555555555 5 0 44444444444444444444 888 55 3 0 0 1 66 111 777 55 111 4 55 4 2 000000 666 7777 777777777777777 4 66 222222 8888 8888888888888888888888888888888888888888888888 66 3 2222 66 888 1 6 1 1 99 999999 0 1 44 7 2 66666
lowQualScore : .... .. . .. ..... . . ......... . . . . . . . . ...... ..... . ............ .. . . . . . ....................................................................... .. . ...... . . . . . ...... . . . ... .. . . ... ..... . . ...... . .... ............. . ... .... . .. ...... ..... .. . .. ......... . . . .... . ................. . . . ................... ... ..... . . . . .. . .. . . . .. . ...... . . ...................... . .. . . . . . .. . . ...... . .. .. ......................................................................................................................................................... . . . . . ..... . . .... ...... .......... . . ... . .... .... . ... . .... ......... . .... . ..... . . ..... ... ................ . . ....... . ........................ . ...... ... ...... .. . ......... .... ....... .. . . . ....... .... . .. . . . .......... . . .................... ... .. . . . . .. ... ... .. ... . .. . . ...... ... .... ............... . .. ...... .... .............................................. .. . .... .. ... . . . . .. ...... . . .. . . .....
lowQualScore : 5555 00 0 00 55555 0 5 000000000 0 0 0 0 0 0 0 0 555555 55555 0 555555555555 55 5 0 8 0 6 00000000000000000000000000000000000000000000000000000000000000000000000 99 0 555555 4 2 0 5 7 444444 4 3 4 333 99 5 1 777 33333 7 4 888888 5 3333 9999999999999 3 777 9999 1 44 222222 11111 99 9 88 333333333 3 3 3 1111 3 99999999999999999 4 9 2 9999999999999999999 888 11111 0 1 2 4 66 7 66 4 7 0 44 4 222222 0 2 0000000000000000000000 4 11 4 0 2 3 4 66 4 4 888888 1 66 11 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 0 6 9 4 2 11111 4 4 4444 888888 4444444444 4 4 777 1 6666 7777 7 777 7 1111 999999999 9 9999 0 88888 2 2 00000 555 0000000000000000 9 8 2222222 0 444444444444444444444444 1 444444 888 888888 55 0 999999999 5555 4444444 11 4 4 4 1111111 6666 0 77 7 9 0 1111111111 0 1 22222222222222222222 777 55 2 1 1 7 11 000 000 55 555 9 00 7 5 555555 444 9999 888888888888888 4 11 888888 5555 1111111111111111111111111111111111111111111111 11 7 4444 99 888 0 7 0 0 22 222222 3 0 77 3 5 77777
consensus : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCCTAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAGATT-GA------TCC-T----AAGATATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATTT--ATNT-C-AA-CTA-G----ATATTT-----CAAAA------A----A--AA----N-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGT-T-A-T---A---AGGA--N-AAGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTA--TAAAAGCAACGAAGATTAG--TTT---T---TGAAA--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTC-TT--TAGCCGCCTCACTA------ACACCGCAAC----TAACG----------CACGCT--AA---------AA-----GCTTG-G--GAAACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
Reference ( family-873 ) : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGAT--GTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGNCAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCCTAAGAC--AA--GGGNCCT-GGTT---TTCG-----AAAGTATCCTAAGATT-GA------TCC-T----AAGATATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATTT--ATTT-C-AA-CTACG----ATATTT-----CAAAA------A----A--AA----N-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAATAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGT-T-A-T---A---AGGA--N-ANGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTA--TAAAAGCAACGAAGATTAG--TTT---T---TGAAA--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTC-TT--TAGCCGCCTCACTA------ACACCGCAAC----TAACG----------CACGCT--AA---------AA-----GCTCG-G--NAAACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|1 : CAAACA----TTTTA--CAAAGTTCATAGATTAATGGGCGTGAACGTCTG-TATC---------TACGTACAATTTGCTCGTCATCCATATAGTCCAATGGGCTGTCCCTATCTCGAAATATTCTATTACGACGGACCTTGTGAGCTTGTCTTTGTAGTAGTAAGTAAACAGCAGCCATATTTGTTTTCG-TGTTTTGTCTTATATTTAGCCTCTAACACGGATCTGTATTAAGATTAT-ATGAAATCTTAT--GACAT-TCTTAAGCCCG---TC---CT----AAGTCAT-GTTG-----CT-----T--------GAT--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TTTCAGTCCTAAGAT--AA--GGGTCCT-GGTT---TTCG-----AAAGTATCCTAAGTTT-GA------TCC-T----AAGATATA-CATGT--A--TCTTAA-GAC---AC---GTCTTAGGACAG------ACT-----TAGGACT--AT-CTTAGGACAATCGCAAAGTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTATGATTGGTCGTAAAATTAT----CT-------A-----TT---TT-----TAAGATTATGT-A-GGGTGCAAGA--GTATTATAA-ATTAAATTTCAAAACCAAAAAATGAAAATTTCTTTTAAATTA-C-TTAA-GTTTAATAGATA-----AGACAT-GT-ATAAGAAACAT--AG-T-TTGA-T-T--AATTCC-GGGAAAA------TAA-GA-ACATTT--ATTT-C-AAACTACGC---ATATTTTTGGCCAAAA------A----A--AA----C-----TGATAAA----T--AAAAAGAGAAGCCCCCC-CCTCCTCCAAT------T-C------G---AATAAAAATTAG-TTAAATATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--T-------GAAT-TG-AAA-TAAAATAATTATATTAAGACAATTT--G-C-C---TTCACAATGTCAAATTGAG----AAG----A----CAAATA----TAATTTTAACTAAA-T-AAA----TCAAAATGAAATAA---TACAATTATTGT---TTGTCCGT---------TGGTTTTATTT-ACGTA---ATGT-TGAATAATT--------AA---T---T---T-TCTATTAC------TTG-TTGTTTACATGTGAATAA---AGACACGCATGA------TTGGGAAA-TGTA-----A--C----ATGTA------GAT--TGT-TGA-T---A---AGGA--A-AAGT-AATGG-CA-TG-TT-AAAAA---------TAATCC----GAACATGTGCC--TGCT------GA-------TC---GATACGTTTGTA--TAAAAGCCACGAAGAGTAG--TTT---T---TTAAA--AGTCATGCCACGAAATTCAATCCTGTGTGTCCAAGGAGCTGCA--GATAT-GCTACATG------AAGTGG---AAAA---GAATAAG--ACTTT--ACTC-TT--TGGCCGCCGCACTA------ACACCGCAAG----TAACA----------CACAC---------------A-----GCTTG-A--GAAACTGT--GCTCACGAATTGA--AATG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGAGGAAATCAG-AAGAAAAAGGACCAC--ATATATGA------ATAGCACAAAAAAGATTATCACAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|10 : GA--TTTTA-AAAAT-GATC-AATTA-----T-T-ACA----TGATACATGTATG--T-------GAGG-TG-AAA-ATAAATAATTTT-TCAAGACATTTC--C-C-CC--TTCACAATATCAA-TTGAG----AAG----T----AAAACAAA--TATTTTCAACTAAAAT---------CAAAATGAA-TA----TACCAATATTGT---TTG----------------GTTTTGTTTTACGTAT--ATGTATGCACA-TC--------AA---T---TCTTT-TCTATTACATGTACTTGCTTGTTCACATGTGAATAA---AGACACGCATGA------TTGG--AA-TGTACATCTA--C----ATGTA------GAT--TGT-T-A-T---ACT-AGTATTG-AGGTCAATAGGCACTGGTT---------------CAATCCCATCAAACATTTGTCCGTGCT------GA-------TC---GATACATTT
gi|11 : tgaCCT-GGTT---TTCG-----AAAGTATCCTAAGTTT-GA------TCC-T----AAGATA-------T--A--TCTTAG-GAC---AC--------------G------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAACAACGTTAG--ACTTAGGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------AAAC--TTTTGTT-----TAC-ATCATTTTTCGAGTGAAATA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCATC-TTTA-GTTTAATACAT------AGAAATGGG-A--AACAA-AT--AA-TATTGATT-T--AATTTC-GG-GAAA------T----A-TCACTT--ATTT-CAAA-CTACGAAATATATTT-----
gi|12 : g-------CCC-CCCCCCCCAATAAAAACT-CCAAGCAA---AAAAAAAATCAGCTTC--AATTGCATGAAATTTTA-AAAA-TGACC-AGATA-----T-T-ATA----TGATA------TG--T-------GGGGTTA-AAA-T-AAACGATTAT-TTAAGACATTTTCCC-C-C---TTCACATTATCAA-TTGAGAAGTAAG----A----CAAATAA---TATTTTCAACTACAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTATCTACATATGTTTGCAGA-TC--------AATTCT---T---T-TCTATTAC------TTTCTTGTTTACATGTGAATAA---AGATACGAATGA------T
gi|13 : cccGGGCCT-GGTT---TTTG-----AAAGTATCCTAAGTTT-GA------TCC-T----AAGATA-------T--A--TCTTAG-GAC---A--------------AG------TC------TAGGACT--AT-CTTACGACAATAGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAA---CATTGA--ACTTAAGATGGTCTTAGGATTG-TCGTAAAATTAT----CAAACTTTTA-----TT---TT-----TAC-ATCGTTTTACGGGTAAAAGA--GTATTATAACATTAAATT--AAA-TTTAAACATA---------TTGAA---------------------ATG-----GGAAA----------CAA-AT--AATT-TTGATT-T--AATTCC-GA-AAAATATATGTAACGA-ATATTT--ATAT----A-TCA-G----TTATTT-----C---------------A--AA----C-----T-ACGAAA--Tatattgttatactagtattgtggacaata
gi|14 : TTGTA--TAAAAGCAACAAAGAGTAG--TTTCTGT---TGAAA--AACCATGCCAGGAAATCCAAAGATACGCGACCGGGGAGGTGAA--GACATCACAACAGG------GTGTGG---AAAA---GAATAAAATA--TT--ACCC-TTTATAGCCGCCTCAATA------ACTCCCCAACAATATAACAACCCCCCCCCCCCCCT--CA---------AA--------------AAAAAGGT--G---GGGAATTAA--AACG--CT---GTCTATGATACAGat
gi|15 : aactacccctgcttttccgaaataTGGTATCAATATTG-TCGTAAGATT----------------------T---TTAAAAATAT-ATC--TTTAGGGATGAAAAAA-GTATTATAGCAATCTATTTCAAA-CAAAATAGTGCAAATTATTTTA----C--C-GATA-GTTTCATACAT-------------------------AT--AA-T-TTGATT-T--AATTTC-GG-AAAA------TAACGA-ACATTT--AGAT-C-AA-T---------TATTT-----CAAAA------G----ATGAA----A-----T-ACgattgtcgttagatcagcaaacg
gi|16 : CTT-GGTT---ATCG-----AAAGTATGCTCAGACT-GA------CGC-C----AAGATAT--C---------TCTTAGTAAC---A--------------AA------TTT-----TAGGAAT--AT-TGGAGGACAATCAAGAACTGTAAAT---------CTAAGCTGCCTT-ACGATTGTT-C----TGACAAAGCTGACCCTA--GGATGGTCTTAGAATTA-TTGCAAAATTTT----C--------ACT---TT---TT-----TAC-Agt
gi|17 : aGCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGT-T-A-T---A---
gi|17 : aaTTGTG--TAAAAACAAC-----TTTG--TAT---T----GAAACAAG-CATGCCATGAAACCCAATCTTCCGTATC-AAGGAGCTGAA--GATATTGCTACACG------AGGTTG---GAAA---GAATAAT--A--Tttaaagacccgccatgaaaaagaaatattgtgtaaaaacaactttgtattgaaacaagcatgccatgaaacccaatcttccgtatcaaggagctgaagatattgctacacgaggttggaaagaataatatctat
gi|18 : aagcatgattggaatgtacatgtacattgttatattaaagacccgccatgaaaaagaaataTGA-CCAATTA-----T-T-ATA----TGATA------TG--T-------GAAG-TA-AAA-----ATAAT---------ACATTTT--C-C-CCCCTTCACAATGTCAA-TTGAG----AAG----A----CAAATAA---TATTTTCAACTAAAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCActat
gi|19 : aa--GGGGCTT-GGAT---GTTG-----AAAGTATCCTAAGATC-GA------TCC-T----AAGATA-------T--G--TCTTAA-GAC---AA---GTGTTGGGACAG------TCT--------GACT--AT-CTTAGGACAATCGTTAATTGTAAATNTTTGTAAACAAATGCGTTTTAAAGACCC-T-C----TAA
gi|2 : AAAA--ATATTATAACATTAATTTTCAAA-CAACAAATTGAAAATTCTTTTGAAATCA-CCGTTA-GTTTTATGCATGCATGTAGAAAT-GG-----GGAA-A----A-T-TAGA-TAT--AGTTTC-AG-AAAA------TAACGA-ACATTTTGATTTAT-AT-CAATG----ATAT-------CAAAATATGAAA----A--AA----CATT--T-ATAAAAGTTT--AAAAA---------------TCCGTCAAT------T--------------------TCA--------ATTGCATGA--AATAA-AAAAAAGA-C-TATTAATACATGT-ATA----TGATA------TG--T-------GAGG-TG-AAA-ATAAATGATTAT-TTAAGACATTTT--T-CAC---TCCACAATGCCAG-TTGAG----AAGTACGA----CAAACAA---TATTTTCAACTAAAAT-AAACATATTAAAAT-AAATA----TGCCAATTTTGT---TTGC---T---------AAAAATTGCTT---------A-GTATGCACA-TC--------TA---T---T---TCTCT-CTA-----------TTGTTTA----------A---AGACGCACATGA------TTGA--AAATGCAC----A--CGTTCATGTA------TAT--TGT-T-A-T---ATCAAGGA--T-ATGT-AATGGGCAATGGTT-AAAAAA--------GAAGCCCACTAAACATTTACCCGTGCTTTTCCGGAATATATATC---GATACGAT-GTA--TAAAA----------TTAT--TTTATAT---TGAAA--ACTCGTGTCACTAAATCCAAACGTGCGTGCCCGATGAGCTGCG--GATATTGCTACACG------AGGTGG---AAAT---GAATAAG--A--CTTGAATC-TT--TAACCGCCTCACTA------ACATTGCAAC----TAACG----------C-CGCT--GA---------AAAG---GATTG-G--GAAACATT----TCACGAATCAA--AACG--CT---GTCAACGGTGCAGACCATGTTAGGACGGTAGACGAAATCAG-GAAGAAATGGACCAT--ATACATGATTACATGTAACACAAAAAAGAT---CAAAATTTTC-TGGCAA----------ATCTTAA-ATACGTTGC-----TTGACGacactaataaaaataa
gi|2 : AAAATTTTCT--GGCAAATCTTAA----------------------ATAC-GTTG-----CT-----T--------GAC--GTCCTTAAGAT-TGAGTCTTA-TCTTTGG-ACtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcCT-GGTT---TTCG-----AAAGTGTCTTAGGA------------CC-G----AA-----A-C---T-------------------C---GCCTTAGGATGG------TCT-----T-GGACC--ATACTCAAGTCAggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|20 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttgacgtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaaTATCCTAAGATC-GA------CCC-T----AAGATACA-----T--A--T--TGG-GAC---AA---ATTGTAGGACAG------TAT-----TAGGACT--AT-CTTAGGACAATCATAAATTGTACAT---------CCAAAATGTCTT-AAAATTG-T-C----CAAG--CAT--G--ATT--GGAcctggggctctta
gi|20 : GCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGT-T-A-T---A---atgtacatgtacattgttatattaaagac
gi|21 : tatcctaagatcgaccctaagatacatattgggacaaattgtaggacagtattaggactatcttaggacaatcataaattgtacatccaaaatgtcttaaaattgtccaa--GGGACTT-GGTT---TTCA-----AACGTATCCTAAGACT-GA------CCC-T----AAGATAT-----------------G-GAC---AA---GTCTAAGAGCAA------TCT-----TAATACT--AT-CTT---------------TGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----T--------------TT--AAAAGGTTTTAGGATTG-TCGTAAGATTTT----C--------A-----TT---TT---------ATTATTTttaaagac
gi|22 : GGATTG-TCGTTAGATCAG----C--------AAACG-TT---TT-----TAC-ATCATTTTATGGGTGAAAGA--GTATTATAAAATTAATATTCAAG-CCAAAAAACAAGTATTCTTTTGAAATCACC-GTTA-GTTCAAAACAT------AAAAAT-GGAA--AACAA-AT--AA-
gi|23 : --GGGGCCT-GGTT---TTCA-----AAAGTATCCTAAGTTT-GA------TCC-T----AAGATATA-----------TCTTAG-GAC---AA---GTCTTAGGACAG------TCC-----TAGGATT--AT-CTTACGACAATCGCAAATTGTAAAT---------CAACTGTGTCTT-AAGATTG-TCC----TAAC--
gi|24 : tTGC---T---------TAGTTTATTTTTA-------ACGTATACACA-TC--------CC---TCCCT---T-CCTATTGC------GTGCTTGTGTACATGTGAATAA---AGACGCGCACGACTAGTTCTGG--AA-TGT------A--C----ATGCA------
gi|25 : agcAACATACGTGTCTGAGGAGCTGCG--GCTATCGCTACATA------AAGTAG---AAAA---AAA---------------TC-TT--TAGCCGCCTCACTA------ATACAACAAC----TAACG----------C-CGCT--AA---------AA------C----------ACTGT--GCTGACtgt
gi|26 : ---T---TGAAA--CATCATGCCACGAAATCAAAA--TACGTGTCTGAGGAGCTGCG--GCTATCGCTATATG------AAGTAG---AAAC---AAA---------------TC-TT--TAGCCGCCTTACTA------ATACTACAAC----
gi|27 : ta--AT-CTTAGGACAATCGTAAATTGTAAAT---------CAGAGAT-TCTT-AAGATTG-T-CCTAGTAAC-------G--A--------AGTCCTATGATTG-TCGTAAGATCATCACAC--------A-----TT---TT-----T
gi|28 : A------A----A--AA----A-----T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAAA------TTA--TG----------------AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-gt
gi|29 : CT-GGTT---TTCG-----AAAGTCTCTTGTGACT-GAAACATGTCT-T----TGGATG----------A--TCTTTG-GAC---AT---GT-TTA----AG------TCA-----TAAGACa
gi|29 : catAT--GTCC-AAAGA--------TCA-TCCAAAG-ACA-TG--TTTCAGTC-----AC--AA--GAGAC------T---TTCG-----AAAc
gi|3 : catgtcttatgacttaaacAAAGAATTAAAATTCTTTTGAATTCA-CAGTTA-GAATAATACAC------AGAAAT-GG-G---GAAA-ATTTGA-T-TTAA-T-TC-AATTTC-GG-AAAA------TAACAA-TCATTT--A-TT-C-AA-T---------TATTT-----CAAAAGATG--A----A--AAACATT-----T-ACAAGA--TT--GAaccagc
gi|3 : ataTTCAAT------TTC------GGAAAATAACAATCA--TT---TATTCAATTA--TTTCA-AAAGATGA-A-AAACA-----T-TTACAAGATTGATT------TGACCAATTATAGAGG-TGCAAA-TAAA----------TAAA----TTT--C-C-C---TTC-TAATATCAA-CTGAG----ACGTA--A----GAAAGAGATTTTTTTTCAACTAAAAT-AAA----TAAAATTGAAATGAATATACCAATATTGT---GTGT---TAATAACTGCTAGTGTT-TTTTA---AC--AT--ATGCACA-TCTAGCCCTTAA---T---T---T--CTATGAC------TTGCTTGTTTACATATGAA-----------------A------TTAG--AA-TGCA--------C----ATGTA------TAT--TGT-T-A-T---ATGAAGGA--ACAAGT-AATGGGCAATGGTT-AAAAAATAAGCGCATAAGCCCGCCAAACATTCATCCATGCT------TT-------TCTCGAATA----TGTA--TAAAAACAACGAACATTAG--TTT---TCATTAAAA--AGTCATGCCACGAAATCCAAACTTTCGTGCCCGAGGAGCTGCG--GGTATTACTACATGTACATGAAGTGGTCCAAAA---GAAT------------------T--TAGCCGCCTCACTACATGTAACACCGCAAC----TGATG----------CA-GCT--AACAAAAAAAAAA-----GCTTGCG--GAAACTGT--GCTCACGAATTAATTCACAGTCTAGAGTCAACGATAAAGACCATGATAACACGGTGAACGAAATCAG-AAAGAAATGGGCCAC--ATACATGA------GTAGCATGCAAAAGATTATCATAA----------AA---TAAGACCATCCTAAGACATGTTGCTAAAATTGACGtttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataagaccatcctaagacatgttgctaaaattgacgtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaaAAGATTATCATAAAAT-----------------AAGACCA---TC---CT----AAGACAT-GTTG-----CTAAAATT--------GAC--GTCC-TAAGAT-TGAATCTTA-TTTTTAG-A-A-CGAATCTAA--CCTAGGAtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaGTTTTA---CTGAGGACA-TG--CATAAGTCATCAGACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATA-----AGATTCAA------TCT-T----AGGACGT--C---A--A--TTTTAGCAAC---AT---GTCTTAGGATGG------TCT-----------T--AT-TTTATGATAATCttcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaaAAAT--AA--GGACCCA-GGTT---TTCG-----AAAGTGTACGAGGA-T-GG------TTT-TACTGAGGACATG-CA--T--AAGTCATCA-GACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATAAGATTCAAT-CTTAGGAC-GTC---AATTTTAG-----------C-AACATGTCTT-AGGATGG-T-C----Tcatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|30 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataAA-AT--TA-T-TTAA-T-CTCAATTCC-TG-AAAA------TAACGACACATTT--ATAT-C-AA--TA--------GTTT-----CAAAA------A----G--Aatataattggagatta
gi|31 : aGACCA---TT---CT----AACAAAT-GCTG-----CT-----T--------GGC--ATCC-TAAGAT-TGAATCTTA-TCtgaaaacat
gi|32 : gattaacaccacaatatatc--GGGGCTT-GGTT---TTCA-----AAAGTGTTCTAAGATC-TA------TCCTT----AAGACA
gi|34 : ctctCCTGCCAAACATTTATCCGTGCT------TT-------TCCGGGATG---TTGTA--TAAAAGCAACagtttta
gi|36 : g--GGGGTCT-G-TT---TTCG-----AAAGTATTCTAA-ATT-GA------TC
gi|39 : tggaagcct--AA--GGG-CCT-GGTT---TTCG-----AAAGTATCCTAAG
gi|4 : -T-T--AATTCCCAG-AAAA-------AAAAA-GCATTT--ATAT-C-A--TT--------TATTT-----CCAAA------AGACGA--AA----TGCATTT-ACAAAA--TTGTAAAAAAA-------------------AAT------C-C----------AATAA----CT--TCA---ATTGCATGA--GATTATAAAATTGA-C-CA-----------------------A------TG--C-------AAGG-TA-AAAATAAAATA-TTAT-TTAAGACATTTT--TTC-C---TTCACAATGTCAA-T-GAG----AAG----AAAGGCAAACAA---TATTTTCAACTGAAAT-AAA-----CGATATTAAATAAATATACCAGTAGTGT---TT-----------------------TTTAAAATA---ATATATGCACA-CC---------------------------TTAC------TTGCTTGTTTACGTGTGAATAATAAAGACGAGCATGA------TTGA--AA-TGCA-----AGTC----ATGTA------CAT---GTAC-A-T---A-----GT--T-ATAT-------CAA--GTT-AAAG----------TAA--------AACATTTAGCCAT-------------------------TA-----GTA--TAAGA-CAACGAAGATTAG--TTT---T---TG------------CCACGAAATCCA-TCTTATGTGTCCGAGGAGCTGCG--GATATTGCTACACA------AAGTGG---AAAAAAAGAATAAG--ACTTT--ACTC-TT--TAGCCGCCTCACTA------ACACTACAAC----TAACG--------------------------------------TCG-T--TAAACTAT--GCTCACGAATT------CG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCAACAAG--AATGGACCACATATACATGA------A---CACAAAAAACATTATCACAACATTCGCGATAATCTTAAGATC------------GTTGC-----TTGACG
gi|4 : AACATTATCACAACATTC-GC--GATAA-TCTTAAGATCG---T--------------------TG-----CT-----T--------GAC--GTCC-TAAGAT-TTAATCTTA-TCATGGG---A-TG------AATCCTAA-------------CTT-------------------AGCA--CTAAGACC--A------TCC-T----AAGGCATGTC---TCAA--TCCTAA-GAC---ACT--GTCtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagaccatcctaaggcatgtctcaatcctaagacactgtcgaaaatcagggtccaggtttaaagaaattagtaatta
gi|4 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaC--ATCC-TAAGGCATG--TCTCAATCCTAAG-ACACTG--TC---G----AAAAT--CA--GGGTCCA-GGTT---T--------AAAGgaaaatcagggtccaggtttaaagaaattagtaatta
gi|5 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaaacattatcacaacattcgcgataatcttaagatcgttgcttgacgtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagacCAACTAAAAT-AAAA---TCAAAATGAA-TA----TACAAGTATTGT---TTG----------------GTTTTGTTTTACGTAC--ATGTATTCACA-TG--------GATTCT---T---T-TCTATTAC------TTGCTTGTTTCCATGTG-ATAA---AGACACGCATGA------TTGG--AA-TGT------A--C----ATGTA------CATACTAG-T-ATT---G---AAGA--C-AA-T--ATAGGCACTGGTTCAAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTATTTAAAAGCAACGAGGAGTAGTTTTT---T---TTTTA--AGTCATGCCACGAAATCCAACATTGCGTGTCCAAGGAGCTGCA--CATATTGCTACATG------AAGTGG---GAA-----------------T--ACTCTTT--TAACCGCTTCACTA------AC-CCGCAAG----TAACG----------CA-GCTTAAA---------AA-----GCTAG-GTATAAACTGT--GTTCACGAATTGA--AACG--CT---GTCAACGATACAAACCATGTTAGGACTGCGGAGGAAATCCG-AAGGAAAAGGACTAC--ATACATGA------ATAGCAAAATAAAGATTATCATAACTTTCGCAACAATCTTAAGACCATCTTAAGACATGTTGC-----TTGACGaaattagtaatta
gi|6 : --GGGGCCT-GGTT---TTCG-----AAAGAATCCTAAGATT-GA------TCC-T----AAGATATA-----------TCTTAG-GAC---AC---GTCTTAGGACAG------TGT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATCA-TCC----TAAtc
gi|6 : cctATGTGAATAA---AGACGGGCATGAATT---TTAA--AAGTGTA--------C----ATGTAGGCCCGTAT--TGT-T-A-TTTCA---AGGA--C-AAGT-ATTGGGCAATGGTTCAAAAA---------TAACCTCGCCAAGCATCTATCAGGGCTTTTTCGGACCATCTTTC---GATTCGTTAGTA--TAAAAGCAACGAAAATTAG--CTTTTAT---TGAAA--AGTCATGCCACGGAATCCAAACTT-CACGTCCGAGGAATTGCG--GATATTGCTGCATG------AAGTGG---Atgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|6 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatcctaCAAC----TAAGG----------CA-GCT--AA---------AAAGAAAGCCTG-A--GAATCTGTTGGTGGAAAAGTT----AATG--CC---GTCAACGACACAGAttacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|7 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatcctaatgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggatta--GGGGATT-GGAT---TTCG-----AAA--AGCCTAG----------------------AAGATATA-T---T-------TTAG-GAA---AT---GTCTTTGGACAG------TCT-----TAGGGCT--AT-CTTAGGACAATCG-------TAAAT---------CAAAGCTATCTT------TG-T-C----T---------------------TG-TCGTAAGATTA-TC-TGA---TAT----C--------ACACTTTT---TT-----CGC-ATCATTATACGAATAAAAAAAAGTATCATAGCATTA---------------AAATTAAAATTCTTTTGAAATCA-C-TATACATTTAATACA-G-----AGAAAT-GG-G--GGAAA-AT--AA-A-TT---T-T---ATCCT-GG-AAAA------TAACGA-CCATAT--AT-----------------ACATTT------ACAA------A----A--AA----A-----T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAA----A--TTA-----------------TG-AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG------AAAATAAT
gi|8 : tT-ATAAA---------TAATCCCGCCAAACATATGTCCGTGCT------GA-------TC---GATACGTTTGTA--TAAAAGCAACGAGGAGTAG--TTT---T---TTAC----GTCATGCCATGAAATCCAATCTTGCGTGTCCAATGAGCTGCACAGATATTGCTTCATG------AAGTGG---AAAA---GAAAAAG--TCTTT--GCAC-TT--TACCAGCGTCACTC------ACACCGCAGG----TA------------------T--AG---------TA-----GCTTG-G--TAAACTGT--GTTCATGAAATGA--AATG--CT---GTCAACGACACAGATCATATTAGGACGGTGGAGGAAATCAG-AAGGAAAAGGACCAC--GTACATGA------ATAGGACAAAAAAGATTATCATAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----
gi|9 : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTTC-----TAGATTT---CT-------GGAT--GT-TTAACATTCTAA-AACATGTTACTTGTCGT-TCTC-AGATTGAATTCGATCTATTAAAGACGCAGTCGAATGTCT-----TATAATTTAGACATGTCC-TACGAC--------CA-TCCTAAG-AAA-TG--TCTCAGTCCTAAGAC--A
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33 ): CTAAATCATTTAACTTGAAATAAGTAATTAGTTAACACCAAGTGTCTCACAGA
Unaligned ( gi|35 ): TTGACCTTAGGATGATATTATAATTATTAAAATCTTCACTTTTT
Unaligned ( gi|37 ): AGTAAATGTTTATGGAAGATTTTTTTAATCAATATATTTT
Unaligned ( gi|38 ): AAATCACTAATACCACTCCGTTTAAATATCAGAGATAAA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 11 22222 1 333333333 222222 22222 333333333333 11 1 55555555555555555555555555555555555555555555555555555555555555555555555 111111 1111111111111111 4444444444444 1111 111111111 1 66666666666666666 5555555555555555555 11111 11 111111 3333333333333333333333 1 11 111111 111111 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11111 111111 1111111111 111 1111 111 1111 222222222 1111 1 11111 33333 111 3333333333333333 2222222 444444444444444444444444 111111 111111 333333333 1111111 2222222 1111 1 2222222222 55555555555555555555 222 111111 4444444444444444 111111 8888888888888888888888888888888888888888888888 1111 111111 11111
lowQualScore : 3333 88 1 22 55555 1 5 888888888 1 1 1 1 1 1 1 1 999999 66666 1 333333333333 88 5 1 8 7 0 44444444444444444444444444444444444444444444444444444444444444444444444 66 4 111111 4 0 4 2 5 6666666666666666 1 66 33 0 2 333 55555 55555 1 2 666666 2 5555 2 8888888888888 5 444 3333 0 11 888888 77777 33 2 44 333333333 3 3 3 7777 1 22222222222222222 4 0 2 0000000000000000000 777 11111 5 0 5 0 33 0 33 1 5 3 00 3 666666 5 0 6666666666666666666666 4 66 4 5 0 3 4 00 4 4 222222 1 55 222222 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 5 3 8 4 2 11111 4 4 9999 222222 9999999999 4 4 777 0 6666 1111 5 555 5 2222 666666666 0 5555 0 55555 3 3 22222 777 8888888888888888 2 4 1111111 5 444444444444444444444444 0 444444 777 666666 55 8 000000000 8888 2222222 66 4 4 4444444 4444 5 77 4 4 0 5555555555 5 0 44444444444444444444 888 55 3 0 0 1 66 111 777 55 111 4 55 4 2 000000 666 8888 4444444444444444 4 55 0 111111 0 8888 0 0000000000000000000000000000000000000000000000 66 3 2222 66 888 1 6 1 1 99 999999 0 1 44 7 2 66666
lowQualScore : .... .. . .. ..... . . ......... . . . . . . . . ...... ..... . ............ .. . . . . . ....................................................................... .. . ...... . . . . . ................ . .. .. . . ... ..... ..... . . ...... . .... . ............. . ... .... . .. ...... ..... .. . .. ......... . . . .... . ................. . . . ................... ... ..... . . . . .. . .. . . . .. . ...... . . ...................... . .. . . . . . .. . . ...... . .. ...... ..................................................................................................................................................... . . . . . ..... . . .... ...... .......... . . ... . .... .... . ... . .... ......... . .... . ..... . . ..... ... ................ . . ....... . ........................ . ...... ... ...... .. . ......... .... ....... .. . . ....... .... . .. . . . .......... . . .................... ... .. . . . . .. ... ... .. ... . .. . . ...... ... .... ................ . .. . ...... . .... . .............................................. .. . .... .. ... . . . . .. ...... . . .. . . .....
lowQualScore : 5555 00 0 00 55555 0 5 000000000 0 0 0 0 0 0 0 0 555555 55555 0 555555555555 00 5 0 8 0 6 00000000000000000000000000000000000000000000000000000000000000000000000 11 4 999999 0 1 4 9 0 4444444444444444 9 99 77 2 0 555 00000 33333 1 2 444444 4 0000 4 9999999999999 0 444 4444 4 44 222222 11111 99 9 88 333333333 3 3 3 1111 3 99999999999999999 4 9 2 9999999999999999999 888 11111 0 1 2 4 66 7 66 4 7 0 44 4 222222 0 2 0000000000000000000000 4 11 4 0 2 3 4 66 4 4 888888 1 66 888888 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 0 6 9 4 2 11111 4 4 4444 888888 4444444444 4 4 777 1 6666 7777 7 777 7 1111 999999999 4 9999 0 88888 2 2 00000 555 0000000000000000 9 8 2222222 0 444444444444444444444444 1 444444 888 888888 55 0 999999999 5555 4444444 11 4 4 8888888 6666 7 44 3 9 0 1111111111 0 1 22222222222222222222 777 55 2 1 1 7 11 000 000 55 555 9 00 7 5 555555 444 5555 5555555555555555 0 55 7 555555 9 5555 1 7777777777777777777777777777777777777777777777 11 7 4444 99 888 0 7 0 0 22 222222 3 0 77 3 5 77777
consensus : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----ATC-GA------TCC-T----AAGAT-ATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATTT------ATATC-AA-TTA-G--TATTT-----CAAAA------A----A--AA----N-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGTT-A-T---A---AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTA--TAAAAGCAACGAAGATTAG--TTT---T---TGAAA--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTC-TT--TAGCCGCCTCACTA------ACACCGCAAC----TAACG----------C-CGCT--AA---------A---A--GCTTG-G--GAAACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
Reference ( family-873 ) : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----ATT-GA------TCC-T----AAGAT-ATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATTT------ATNTC-AA-CTA-G-ATATTT-----CAAAA------A----A--AA----N-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGTT-A-T---A---AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTA--TAAAAGCAACGAAGATTAG--TTT---T---TGAAA--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTC-TT--TAGCCGCCTCACTA------ACACCGCAAC----TAACG----------CACGCT--AA---------A---A--GCTTG-G--GAAACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|1 : CAAACA----TTTTA--CAAAGTTCATAGATTAATGGGCGTGAACGTCTG-TATC---------TACGTACAATTTGCTCGTCATCCATATAGTCCAATGGGCTGTCCCTATCTCGAAATATTCTATTACGACGGACCTTGTGAGCTTGTCTTTGTAGTAGTAAGTAAACAGCAGCCATATTTGTTTTCG-TGTTTTGTCTTATATTTAGCCTCTAACACGGATCTGTATTAAGATTAT-ATGAAATCTTAT--GACAT-TCTTAAGCCCG---TC---CT----AAGTCAT-GTTG-----CT-----T--------GAT--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TTTCAGTCC-----TAAGAT--AA--GGGTCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TTT-GA------TCC-T----AAGAT-ATA-CATGT--A--TCTTAA-GAC---AC---GTCTTAGGACAG------ACT-----TAGGACT--AT-CTTAGGACAATCGCAAAGTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTATGATTGGTCGTAAAATTAT----CT-------A-----TT---TT-----TAAGATTATGT-A-GGGTGCAAGA--GTATTATAA-ATTAAATTTCAAAACCAAAAAATGAAAATTTCTTTTAAATTA-C-TTAA-GTTTAATAGATA-----AGACAT-GT-ATAAGAAACAT--AG-T-TTGA-T-T--AATTCC-GGGAAAA------TAA-GA-ACATTT------ATTTC-AAACTACGCATATTTTTGGCCAAAA------A----A--AA----C-----TGATAAA----T--AAAAAGAGAAGCCCCCC-CCTCCTCCAAT------T-C------G---AATAAAAATTAG-TTAAATATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--T-------GAAT-TG-AAA-TAAAATAATTATATTAAGACAATTT--G-C-C---TTCACAATGTCAAATTGAG----AAG----A----CAAATA----TAATTTTAACTAAA-T-AAA----TCAAAATGAAATAA---TACAATTATTGT---TTGTCCGT---------TGGTTTTATTT-ACGTA---ATGT-TGAATAATT--------AA---T---T---T-TCTATTAC------TTG-TTGTTTACATGTGAATAA---AGACACGCATGA------TTGGGAAA-TGTA-----A--C----ATGTA------GAT--TGTTGA-T---A---AGGA--A-A-AGT-AATGG-CA-TG-TT-AAAAA---------TAATCC----GAACATGTGCC--TGCT------GA-------TC---GATACGTTTGTA--TAAAAGCCACGAAGAGTAG--TTT---T---TTAAA--AGTCATGCCACGAAATTCAATCCTGTGTGTCCAAGGAGCTGCA--GATAT-GCTACATG------AAGTGG---AAAA---GAATAAG--ACTTT--ACTC-TT--TGGCCGCCGCACTA------ACACCGCAAG----TAACA----------CACAC------------------A--GCTTG-A--GAAACTGT--GCTCACGAATTGA--AATG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGAGGAAATCAG-AAGAAAAAGGACCAC--ATATATGA------ATAGCACAAAAAAGATTATCACAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|10 : GA--TTTTA-AAAAT-GATC-AATTA-----T-T-ACA----TGATACATGTATG--T-------GAGG-TG-AAA-ATAAATAATTTT-TCAAGACATTTC--C-C-CC--TTCACAATATCAA-TTGAG----AAG----T----AAAACAAA--TATTTTCAACTAAAAT---------CAAAATGAA-TA----TACCAATATTGT---TTG----------------GTTTTGTTTTACGTAT--ATGTATGCACA-TC--------AA---T---TCTTT-TCTATTACATGTACTTGCTTGTTCACATGTGAATAA---AGACACGCATGA------TTGG--AA-TGTACATCTA--C----ATGTA------GAT--TGTT-A-T---ACT-AGTATTG-A-GGTCAATAGGCACTGGTT---------------CAATCCCATCAAACATTTGTCCGTGCT------GA-------TC---GATACATTT
gi|11 : tgaGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TTT-GA------TCC-T----AAGAT-A-------T--A--TCTTAG-GAC---AC--------------G------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAACAACGTTAG--ACTTAGGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------AAAC--TTTTGTT-----TAC-ATCATTTTTCGAGTGAAATA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCATC-TTTA-GTTTAATACAT------AGAAATGGG-A--AACAA-AT--AA-TATTGATT-T--AATTTC-GG-GAAA------T----A-TCACTT------ATTTCAAA-CTA-
gi|12 : -------CCC-CCCCCCCCAATAAAAACT-CCAAGCAA---AAAAAAAATCAGCTTC--AATTGCATGAAATTTTA-AAAA-TGACC-AGATA-----T-T-ATA----TGATA------TG--T-------GGGGTTA-AAA-T-AAACGATTAT-TTAAGACATTTTCCC-C-C---TTCACATTATCAA-TTGAGAAGTAAG----A----CAAATAA---TATTTTCAACTACAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTATCTACATATGTTTGCAGA-TC--------AATTCT---T---T-TCTATTAC------TTTCTTGTTTACATGTGAATAA---AGATACGAATGA------Tcgaaatatattt
gi|13 : cccGGGCCT-GGTT---TTTG-----AAAGTATCCTAAG-----TTT-GA------TCC-T----AAGAT-A-------T--A--TCTTAG-GAC---A--------------AG------TC------TAGGACT--AT-CTTACGACAATAGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAA---CATTGA--ACTTAAGATGGTCTTAGGATTG-TCGTAAAATTAT----CAAACTTTTA-----TT---TT-----TAC-ATCGTTTTACGGGTAAAAGA--GTATTATAACATTAAATT--AAA-TTTAAACATA---------TTGAA---------------------ATG-----GGAAA----------CAA-AT--AATT-TTGATT-T--AATTCC-GA-AAAATATATGTAACGA-ATATTT------ATAT---A-TCA-G-TTATTT-----C---------------A--AA----C-----T-ACGAAA--Tatattgttatactagtattgtggacaata
gi|14 : TTGTA--TAAAAGCAACAAAGAGTAG--TTTCTGT---TGAAA--AACCATGCCAGGAAATCCAAAGATACGCGACCGGGGAGGTGAA--GACATCACAACAGG------GTGTGG---AAAA---GAATAAAATA--TT--ACCC-TTTATAGCCGCCTCAATA------ACTCCCCAACAATATAACAACCCCCCCCCCCCCCT--CA---------A---A-----------AAAAAGGT--G---GGGAATTAA--AACG--CT---GTCTATGATACAGat
gi|15 : aactacccctgcttttccgaaataTGGTATCAATATTG-TCGTAAGATT----------------------T---TTAAAAATAT-ATC--TTTAGGGATGAAAAAA-GTATTATAGCAATCTATTTCAAA-CAAAATAGTGCAAATTATTTTA----C--C-GATA-GTTTCATACAT-------------------------AT--AA-T-TTGATT-T--AATTTC-GG-AAAA------TAACGA-ACATTT------AGATC-AA-T------TATTT-----CAAAA------G----ATGAA----A-----T-ACgattgtcgttagatcagcaaacg
gi|16 : CTT-GGTT---ATCG-----AAAGTATGCTCAG-----ACT-GA------CGC-C----AAGAT-AT--C---------TCTTAGTAAC---A--------------AA------TTT-----TAGGAAT--AT-TGGAGGACAATCAAGAACTGTAAAT---------CTAAGCTGCCTT-ACGATTGTT-C----TGACAAAGCTGACCCTA--GGATGGTCTTAGAATTA-TTGCAAAATTTT----C--------ACT---TT---TT-----TAC-Agt
gi|17 : aGCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGTT-A-T---A---
gi|17 : aaTTGTG--TAAAAACAAC-----TTTG--TAT---T----GAAACAAG-CATGCCATGAAACCCAATCTTCCGTATC-AAGGAGCTGAA--GATATTGCTACACG------AGGTTG---GAAA---GAATAAT--A--Tttaaagacccgccatgaaaaagaaatattgtgtaaaaacaactttgtattgaaacaagcatgccatgaaacccaatcttccgtatcaaggagctgaagatattgctacacgaggttggaaagaataatatctat
gi|18 : aagcatgattggaatgtacatgtacattgttatattaaagacccgccatgaaaaagaaataTGA-CCAATTA-----T-T-ATA----TGATA------TG--T-------GAAG-TA-AAA-----ATAAT---------ACATTTT--C-C-CCCCTTCACAATGTCAA-TTGAG----AAG----A----CAAATAA---TATTTTCAACTAAAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCActat
gi|19 : aa--GGGGCTT-GGAT---GTTG-----AAAGTATCCTAAG-----ATC-GA------TCC-T----AAGAT-A-------T--G--TCTTAA-GAC---AA---GTGTTGGGACAG------TCT--------GACT--AT-CTTAGGACAATCGTTAATTGTAAATNTTTGTAAACAAATGCGTTTTAAAGACCC-T-C----TAA
gi|2 : AAAA--ATATTATAACATTAATTTTCAAA-CAACAAATTGAAAATTCTTTTGAAATCA-CCGTTA-GTTTTATGCATGCATGTAGAAAT-GG-----GGAA-A----A-T-TAGA-TAT--AGTTTC-AG-AAAA------TAACGA-ACATTTTGATTTATATC-AA-T---G-ATAT-------CAAAATATGAAA----A--AA----CATT--T-ATAAAAGTTT--AAAAA---------------TCCGTCAAT------T--------------------TCA--------ATTGCATGA--AATAA-AAAAAAGA-C-TATTAATACATGT-ATA----TGATA------TG--T-------GAGG-TG-AAA-ATAAATGATTAT-TTAAGACATTTT--T-CAC---TCCACAATGCCAG-TTGAG----AAGTACGA----CAAACAA---TATTTTCAACTAAAAT-AAACATATTAAAAT-AAATA----TGCCAATTTTGT---TTGC---T---------AAAAATTGCTT---------A-GTATGCACA-TC--------TA---T---T---TCTCT-CTA-----------TTGTTTA----------A---AGACGCACATGA------TTGA--AAATGCAC----A--CGTTCATGTA------TAT--TGTT-A-T---ATCAAGGA--T-A-TGT-AATGGGCAATGGTT-AAAAAA--------GAAGCCCACTAAACATTTACCCGTGCTTTTCCGGAATATATATC---GATACGAT-GTA--TAAAA----------TTAT--TTTATAT---TGAAA--ACTCGTGTCACTAAATCCAAACGTGCGTGCCCGATGAGCTGCG--GATATTGCTACACG------AGGTGG---AAAT---GAATAAG--A--CTTGAATC-TT--TAACCGCCTCACTA------ACATTGCAAC----TAACG----------C-CGCT--GA---------A---AAGGATTG-G--GAAACATT----TCACGAATCAA--AACG--CT---GTCAACGGTGCAGACCATGTTAGGACGGTAGACGAAATCAG-GAAGAAATGGACCAT--ATACATGATTACATGTAACACAAAAAAGAT---CAAAATTTTC-TGGCAA----------ATCTTAA-ATACGTTGC-----TTGACGacactaataaaaataa
gi|2 : AAAATTTTCT--GGCAAATCTTAA----------------------ATAC-GTTG-----CT-----T--------GAC--GTCCTTAAGAT-TGAGTCTTA-TCTTTGG-ACtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatc--GTCT-TAGGAC-CGAAACTCG-CCTTAGG-ATG--G--TCTTGGACCATACTCAAGTC--AT--TGGACAT-G-TT---TTCG-----ATTGAGTTCTAAGTTAGTATC-CG------TCC-A----AAGATAAGA-C---TCAA--TCTTAA-GG----AC---GTCggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttCT-GGTT---TTCG-----AAAGTGTCTTAGG-----A------------CC-G----AA------A-C---T-------------------C---GCCTTAGGATGG------TCT-----T-GGACC--ATACTCAAGTCAactttcgaaaaccagcctggggctctta
gi|20 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttgacgtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaaTATCCTAAG-----ATC-GA------CCC-T----AAGAT-ACA-----T--A--T--TGG-GAC---AA---ATTGTAGGACAG------TAT-----TAGGACT--AT-CTTAGGACAATCATAAATTGTACAT---------CCAAAATGTCTT-AAAATTG-T-C----CAAG--CAT--G--ATT--GGAcctggggctctta
gi|20 : GCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGTT-A-T---A---atgtacatgtacattgttatattaaagac
gi|21 : tatcctaagatcgaccctaagatacatattgggacaaattgtaggacagtattaggactatcttaggacaatcataaattgtacatccaaaatgtcttaaaattgtccaa--GGGACTT-GGTT---TTCA-----AACGTATCCTAAG-----ACT-GA------CCC-T----AAGAT-AT-----------------G-GAC---AA---GTCTAAGAGCAA------TCT-----TAATACT--AT-CTT---------------TGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----T--------------TT--AAAAGGTTTTAGGATTG-TCGTAAGATTTT----C--------A-----TT---TT---------ATTATTTttaaagac
gi|22 : GGATTG-TCGTTAGATCAG----C--------AAACG-TT---TT-----TAC-ATCATTTTATGGGTGAAAGA--GTATTATAAAATTAATATTCAAG-CCAAAAAACAAGTATTCTTTTGAAATCACC-GTTA-GTTCAAAACAT------AAAAAT-GGAA--AACAA-AT--AA-
gi|23 : --GGGGCCT-GGTT---TTCA-----AAAGTATCCTAAG-----TTT-GA------TCC-T----AAGAT-ATA-----------TCTTAG-GAC---AA---GTCTTAGGACAG------TCC-----TAGGATT--AT-CTTACGACAATCGCAAATTGTAAAT---------CAACTGTGTCTT-AAGATTG-TCC----TAAC--
gi|24 : tTGC---T---------TAGTTTATTTTTA-------ACGTATACACA-TC--------CC---TCCCT---T-CCTATTGC------GTGCTTGTGTACATGTGAATAA---AGACGCGCACGACTAGTTCTGG--AA-TGT------A--C----ATGCA------
gi|25 : agcAACATACGTGTCTGAGGAGCTGCG--GCTATCGCTACATA------AAGTAG---AAAA---AAA---------------TC-TT--TAGCCGCCTCACTA------ATACAACAAC----TAACG----------C-CGCT--AA---------A---A---C----------ACTGT--GCTGACtgt
gi|26 : ---T---TGAAA--CATCATGCCACGAAATCAAAA--TACGTGTCTGAGGAGCTGCG--GCTATCGCTATATG------AAGTAG---AAAC---AAA---------------TC-TT--TAGCCGCCTTACTA------ATACTACAAC----
gi|27 : ta--AT-CTTAGGACAATCGTAAATTGTAAAT---------CAGAGAT-TCTT-AAGATTG-T-CCTAGTAAC-------G--A--------AGTCCTATGATTG-TCGTAAGATCATCACAC--------A-----TT---TT-----T
gi|28 : A------A----A--AA----A-----T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAAA------TTA--TG----------------AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-gt
gi|29 : CT-GGTT---TTCG-----AAAGTCTCTTGTG-----ACT-GAAACATGTCT-T----TGGAT-G----------A--TCTTTG-GAC---AT---GT-TTA----AG------TCA-----TAAGACa
gi|29 : catAT--GTCC-AAAGA--------TCA-TCCAAAG-ACA-TG--TTTCAGTC----------AC--AA--GAGAC------T---TTCG-----AAAc
gi|3 : catgtcttatgacttaaacAAAGAATTAAAATTCTTTTGAATTCA-CAGTTA-GAATAATACAC------AGAAAT-GG-G---GAAA-ATTTGA-T-TTAA-T-TC-AATTTC-GG-AAAA------TAACAA-TCATTT------AT-TC-AA-T------TATTT-----CAAAAGATG--A----A--AAACATT-----T-ACAAGA--TT--GAaccagc
gi|3 : ataTTCAAT------TTC------GGAAAATAACAATCA--TT---TATTCAATTA--TTTCA-AAAGATGA-A-AAACA-----T-TTACAAGATTGATT------TGACCAATTATAGAGG-TGCAAA-TAAA----------TAAA----TTT--C-C-C---TTC-TAATATCAA-CTGAG----ACGTA--A----GAAAGAGATTTTTTTTCAACTAAAAT-AAA----TAAAATTGAAATGAATATACCAATATTGT---GTGT---TAATAACTGCTAGTGTT-TTTTA---AC--AT--ATGCACA-TCTAGCCCTTAA---T---T---T--CTATGAC------TTGCTTGTTTACATATGAA-----------------A------TTAG--AA-TGCA--------C----ATGTA------TAT--TGTT-A-T---ATGAAGGA--ACA-AGT-AATGGGCAATGGTT-AAAAAATAAGCGCATAAGCCCGCCAAACATTCATCCATGCT------TT-------TCTCGAATA----TGTA--TAAAAACAACGAACATTAG--TTT---TCATTAAAA--AGTCATGCCACGAAATCCAAACTTTCGTGCCCGAGGAGCTGCG--GGTATTACTACATGTACATGAAGTGGTCCAAAA---GAAT------------------T--TAGCCGCCTCACTACATGTAACACCGCAAC----TGATG----------CA-GCT--AACAAAAAAAAA---A--GCTTGCG--GAAACTGT--GCTCACGAATTAATTCACAGTCTAGAGTCAACGATAAAGACCATGATAACACGGTGAACGAAATCAG-AAAGAAATGGGCCAC--ATACATGA------GTAGCATGCAAAAGATTATCATAA----------AA---TAAGACCATCCTAAGACATGTTGCTAAAATTGACGtttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataagaccatcctaagacatgttgctaaaattgacgtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaaAAGATTATCATAAAAT-----------------AAGACCA---TC---CT----AAGACAT-GTTG-----CTAAAATT--------GAC--GTCC-TAAGAT-TGAATCTTA-TTTTTAG-A-A-CGAATCTAA--CC-----TAGGAtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaGTTTTA---CTGAGGACA-TG--CATAAGTCA-----TCAGACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATA-----AG-----ATTCAA------TCT-T----AGGAC-GT--C---A--A--TTTTAGCAAC---AT---GTCTTAGGATGG------TCT-----------T--AT-TTTATGATAATCttcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaaAAAT--AA--GGACCCA-GGTT---TTCG-----AAAGTGTACGAGG-----A-T-GG------TTT-TACTGAGGAC-ATG-CA--T--AAGTCATCA-GACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATAAGATTCAAT-CTTAGGAC-GTC---AATTTTAG-----------C-AACATGTCTT-AGGATGG-T-C----Tcatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|30 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataAA-AT--TA-T-TTAA-T-CTCAATTCC-TG-AAAA------TAACGACACATTT------ATATC-AA--TA-G----TTT-----CAAAA------A----G--Aatataattggagatta
gi|31 : aGACCA---TT---CT----AACAAAT-GCTG-----CT-----T--------GGC--ATCC-TAAGAT-TGAATCTTA-TCtgaaaacat
gi|32 : gattaacaccacaatatatc--GGGGCTT-GGTT---TTCA-----AAAGTGTTCTAAG-----ATC-TA------TCCTT----AAGAC-A
gi|34 : ctctCCTGCCAAACATTTATCCGTGCT------TT-------TCCGGGATG---TTGTA--TAAAAGCAACagtttta
gi|36 : g--GGGGTCT-G-TT---TTCG-----AAAGTATTCTAA------ATT-GA------TC
gi|39 : tggaagcctA--AGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----
gi|4 : -T-T--AATTCCCAG-AAAA-------AAAAA-GCATTT------ATATC-A--TT-----TATTT-----CCAAA------AGACGA--AA----TGCATTT-ACAAAA--TTGTAAAAAAA-------------------AAT------C-C----------AATAA----CT--TCA---ATTGCATGA--GATTATAAAATTGA-C-CA-----------------------A------TG--C-------AAGG-TA-AAAATAAAATA-TTAT-TTAAGACATTTT--TTC-C---TTCACAATGTCAA-T-GAG----AAG----AAAGGCAAACAA---TATTTTCAACTGAAAT-AAA-----CGATATTAAATAAATATACCAGTAGTGT---TT-----------------------TTTAAAATA---ATATATGCACA-CC---------------------------TTAC------TTGCTTGTTTACGTGTGAATAATAAAGACGAGCATGA------TTGA--AA-TGCA-----AGTC----ATGTA------CAT---GT---------------A--C-ATAGT-TATAT-CAA--GTT-AAAG----------TAA--------AACATTTAGCCAT-------------------------TA-----GTA--TAAGA-CAACGAAGATTAG--TTT---T---TG------------CCACGAAATCCA-TCTTATGTGTCCGAGGAGCTGCG--GATATTGCTACACA------AAGTGG---AAAAAAAGAATAAG--ACTTT--ACTC-TT--TAGCCGCCTCACTA------ACACTACAAC----TAACG----------T-CGTT--AA---------A-------------------CTAT--GCTCACGAATT------CG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCAACAAG--AATGGACCACATATACATGA------A---CACAAAAAACATTATCACAACATTCGCGATAATCTTAAGATC------------GTTGC-----TTGACG
gi|4 : AACATTATCACAACATTC-GC--GATAA-TCTTAAGATCG---T--------------------TG-----CT-----T--------GAC--GTCC-TAAGAT-TTAATCTTA-TCATGGG---A-TG------AATCC-----TAA-------------CTT-------------------AGCA--CTAAG-----ACC--A------TCC-T----AAGGC-ATGTC---TCAA--TCCTAA-GAC---ACT--GTCtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagaccatcctaaggcatgtctcaatcctaagacactgtcgaaaatcagggtccaggtttaaagaaattagtaatta
gi|4 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaC--ATCC-TAAGGCATG--TCTCAATCCTAAG-ACACTG--TC---G---------AAAAT--CA--GGGTCCA-GGTT---T--------AAAGgaaaatcagggtccaggtttaaagaaattagtaatta
gi|5 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaaacattatcacaacattcgcgataatcttaagatcgttgcttgacgtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagacCAACTAAAAT-AAAA---TCAAAATGAA-TA----TACAAGTATTGT---TTG----------------GTTTTGTTTTACGTAC--ATGTATTCACA-TG--------GATTCT---T---T-TCTATTAC------TTGCTTGTTTCCATGTG-ATAA---AGACACGCATGA------TTGG--AA-TGT------A--C----ATGTA------CATACTAGT-ATT---G---AAGA--C-A-A-T--ATAGGCACTGGTTCAAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTATTTAAAAGCAACGAGGAGTAGTTTTT---T---TTTTA--AGTCATGCCACGAAATCCAACATTGCGTGTCCAAGGAGCTGCA--CATATTGCTACATG------AAGTGG---GAA-----------------T--ACTCTTT--TAACCGCTTCACTA------AC-CCGCAAG----TAACG----------CA-GCTTAAA---------A---A--GCTAG-GTATAAACTGT--GTTCACGAATTGA--AACG--CT---GTCAACGATACAAACCATGTTAGGACTGCGGAGGAAATCCG-AAGGAAAAGGACTAC--ATACATGA------ATAGCAAAATAAAGATTATCATAACTTTCGCAACAATCTTAAGACCATCTTAAGACATGTTGC-----TTGACGaaattagtaatta
gi|6 : --GGGGCCT-GGTT---TTCG-----AAAGAATCCTAAG-----ATT-GA------TCC-T----AAGAT-ATA-----------TCTTAG-GAC---AC---GTCTTAGGACAG------TGT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATCA-TCC----TAAtc
gi|6 : cctATGTGAATAA---AGACGGGCATGAATT---TTAA--AAGTGTA--------C----ATGTAGGCCCGTAT--TGTT-A-TTTCA---AGGA--C-A-AGT-ATTGGGCAATGGTTCAAAAA---------TAACCTCGCCAAGCATCTATCAGGGCTTTTTCGGACCATCTTTC---GATTCGTTAGTA--TAAAAGCAACGAAAATTAG--CTTTTAT---TGAAA--AGTCATGCCACGGAATCCAAACTT-CACGTCCGAGGAATTGCG--GATATTGCTGCATG------AAGTG-----------------G--A--TT--AC--------A--------ACTA------A---GGCAGC----TAA--------------------AA---------AGAAA--GCCTG-A--GAATCTGTTGGTGGAAAAGTT----AATG--CC---GTCAACGACACAGAtgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|7 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatccta--GGGGATT-GGAT---TTCG-----AAA--AGCCTAG---------------------------AAGAT-ATA-T---T-------TTAG-GAA---AT---GTCTTTGGACAG------TCT-----TAGGGCT--AT-CTTAGGACAATCG-------TAAAT---------CAAAGCTATCTT------TG-T-C----T---------------------TG-TCGTAAGATTA-TC-TGA---TAT----C--------ACACTTTT---TT-----CGC-ATCATTATACGAATAAAAAAAAGTATCATAGCATTA---------------AAATTAAAATTCTTTTGAAATCA-C-TATACATTTAATACA-G-----AGAAAT-GG-G--GGAAA-AT--AA-A-TT---T-T---ATCCT-GG-AAAA------TAACGA-CCATAT------AT-------------ACATTT------ACAA------A----A--AA----A-----T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAA----A--TTA-----------------TG-AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG------AAAATAAT
gi|8 : tT-ATAAA---------TAATCCCGCCAAACATATGTCCGTGCT------GA-------TC---GATACGTTTGTA--TAAAAGCAACGAGGAGTAG--TTT---T---TTAC----GTCATGCCATGAAATCCAATCTTGCGTGTCCAATGAGCTGCACAGATATTGCTTCATG------AAGTGG---AAAA---GAAAAAG--TCTTT--GCAC-TT--TACCAGCGTCACTC------ACACCGCAGG----TA------------------T--AG---------T---A--GCTTG-G--TAAACTGT--GTTCATGAAATGA--AATG--CT---GTCAACGACACAGATCATATTAGGACGGTGGAGGAAATCAG-AAGGAAAAGGACCAC--GTACATGA------ATAGGACAAAAAAGATTATCATAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----
gi|9 : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTTC-----TAGATTT---CT-------GGA--TGT-TTAACATTCTAA-AACATGTTACTTGTCGT-TCTC-AGATTGAATTCGATCTATTAAAGACGCAGTCGAATGTCT-----TATAATTTAGACATGTCC-TACGAC--------CA-TCCTAAG-AAA-TG--TCTCAGTCC-----TAAGAC--A
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33 ): CTAAATCATTTAACTTGAAATAAGTAATTAGTTAACACCAAGTGTCTCACAGA
Unaligned ( gi|35 ): TTGACCTTAGGATGATATTATAATTATTAAAATCTTCACTTTTT
Unaligned ( gi|37 ): AGTAAATGTTTATGGAAGATTTTTTTAATCAATATATTTT
Unaligned ( gi|38 ): AAATCACTAATACCACTCCGTTTAAATATCAGAGATAAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 11 22222 1 333333333 222222 22222 333333333333 11 1 55555555555555555555555555555555555555555555555555555555555555555555555 111111 1111111111111111 4444444444444 1111 111111111 1 66666666666666666 5555555555555555555 11111 11 111111 3333333333333333333333 11 111111 111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111 111111 1111111111 111 1111 111 1111 222222222 1111 1 11111 33333 111 3333333333333333 2222222 444444444444444444444444 111111 111111 33333333 1111111 2222222 1111 1 2222222222 55555555555555555555 222 111111 4444444444444444 111111 666666666666666666666666666666666666666666666 1111 111111 11111
lowQualScore : 3333 88 1 22 55555 1 5 888888888 1 1 1 1 1 1 1 1 999999 66666 1 333333333333 88 5 1 8 7 0 44444444444444444444444444444444444444444444444444444444444444444444444 66 4 111111 4 0 4 2 5 6666666666666666 1 66 33 0 2 333 55555 55555 44 666666 2 5555 2 8888888888888 5 444 3333 0 11 888888 77777 33 2 44 333333333 3 3 3 7777 1 22222222222222222 4 0 2 0000000000000000000 777 11111 5 0 5 0 33 0 33 1 5 3 00 3 666666 5 0 6666666666666666666666 4 66 4 5 0 8 4 55 4 4 222222 1 55 222222 2 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 5 3 8 4 2 11111 4 4 9999 222222 9999999999 4 4 777 0 6666 1111 5 555 5 2222 666666666 0 5555 0 55555 3 3 22222 777 8888888888888888 2 4 1111111 5 444444444444444444444444 0 444444 777 666666 55 8 55555555 8888 2222222 66 4 9999999 4444 5 5 1 4 4 0 5555555555 5 0 44444444444444444444 888 55 3 0 0 1 111 777 99999 111 4 55 4 2 000000 666 8888 4444444444444444 55 4 0 111111 0 8888 0 222222222222222222222222222222222222222222222 66 3 2222 66 888 1 6 1 1 99 999999 0 1 44 7 2 66666
lowQualScore : .... .. . .. ..... . . ......... . . . . . . . . ...... ..... . ............ .. . . . . . ....................................................................... .. . ...... . . . . . ................ . .. .. . . ... ..... ..... .. ...... . .... . ............. . ... .... . .. ...... ..... .. . .. ......... . . . .... . ................. . . . ................... ... ..... . . . . .. . .. . . . .. . ...... . . ...................... . .. . . . . . .. . . ...... . .. ...... . ................................................................................................................................................ . . . . . ..... . . .... ...... .......... . . ... . .... .... . ... . .... ......... . .... . ..... . . ..... ... ................ . . ....... . ........................ . ...... ... ...... .. . ........ .... ....... .. . ....... .... . . . . . . .......... . . .................... ... .. . . . . ... ... ..... ... . .. . . ...... ... .... ................ .. . . ...... . .... . ............................................. .. . .... .. ... . . . . .. ...... . . .. . . .....
lowQualScore : 5555 00 0 00 55555 0 5 000000000 0 0 0 0 0 0 0 0 555555 55555 0 555555555555 00 5 0 8 0 6 00000000000000000000000000000000000000000000000000000000000000000000000 11 4 999999 0 1 4 9 0 4444444444444444 9 99 77 2 0 555 00000 33333 44 444444 4 0000 4 9999999999999 0 444 4444 4 44 222222 11111 99 9 88 333333333 3 3 3 1111 3 99999999999999999 4 9 2 9999999999999999999 888 11111 0 1 2 4 66 7 66 4 7 0 44 4 222222 0 2 0000000000000000000000 4 11 4 0 2 9 4 00 4 4 888888 1 66 888888 2 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 6 9 4 2 11111 4 4 4444 888888 4444444444 4 4 777 1 6666 7777 7 777 7 1111 999999999 4 9999 0 88888 2 2 00000 555 0000000000000000 9 8 2222222 0 444444444444444444444444 1 444444 888 888888 55 0 00000000 5555 4444444 11 4 2222222 6666 7 7 7 3 9 0 1111111111 0 1 22222222222222222222 777 55 2 1 1 7 000 000 33333 555 9 00 7 5 555555 444 5555 7777777777777777 55 0 7 555555 9 5555 1 222222222222222222222222222222222222222222222 11 7 4444 99 888 0 7 0 0 22 222222 3 0 77 3 5 77777
consensus : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-ATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATTT------ATATCAA-TTA-----TATTT-----CAAAA------A----A--AA----C-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGTT-AT---A---AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TGAA--A--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTCTT--T-AGCCGCCTCACTA------ACACCGCAAC----TAACG-----------C-CGCT--AA---------AA--GCTTG-GGA--AACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
Reference ( family-873 ) : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-ATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATTT------ATATCAA-TTA---G-TATTT-----CAAAA------A----A--AA----N-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGTT-AT---A---AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TGAA--A--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTCTT--T-AGCCGCCTCACTA------ACACCGCAAC----TAACG-----------C-CGCT--AA---------AA--GCTTG-GGA--AACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|1 : CAAACA----TTTTA--CAAAGTTCATAGATTAATGGGCGTGAACGTCTG-TATC---------TACGTACAATTTGCTCGTCATCCATATAGTCCAATGGGCTGTCCCTATCTCGAAATATTCTATTACGACGGACCTTGTGAGCTTGTCTTTGTAGTAGTAAGTAAACAGCAGCCATATTTGTTTTCG-TGTTTTGTCTTATATTTAGCCTCTAACACGGATCTGTATTAAGATTAT-ATGAAATCTTAT--GACAT-TCTTAAGCCCG---TC---CT----AAGTCAT-GTTG-----CT-----T--------GAT--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TTTCAGTCC-----TAAGAT--AA--GGGTCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-ATA-CATGT--A--TCTTAA-GAC---AC---GTCTTAGGACAG------ACT-----TAGGACT--AT-CTTAGGACAATCGCAAAGTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTATGATTGGTCGTAAAATTAT----CT-------A-----TT---TT-----TAAGATTATGT-A-GGGTGCAAGA--GTATTATAA-ATTAAATTTCAAAACCAAAAAATGAAAATTTCTTTTAAATTA-C-TTAA-GTTTAATAGATA-----AGACAT-GT-ATAAGAAACAT--AG-T-TTGA-T-T--AATTCC-GGGAAAA------TAA-GA-ACATTT------ATTTCAAACTACGCA-TATTTTTGGCCAAAA------A----A--AA----C-----TGATAAA----T--AAAAAGAGAAGCCCCCC-CCTCCTCCAAT------T-C------G---AATAAAAATTAG-TTAAATATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--T-------GAAT-TG-AAA-TAAAATAATTATATTAAGACAATTT--G-C-C---TTCACAATGTCAAATTGAG----AAG----A----CAAATA----TAATTTTAACTAAA-T-AAA----TCAAAATGAAATAA---TACAATTATTGT---TTGTCCGT---------TGGTTTTATTT-ACGTA---ATGT-TGAATAATT--------AA---T---T---T-TCTATTAC------TTG-TTGTTTACATGTGAATAA---AGACACGCATGA------TTGGGAAA-TGTA-----A--C----ATGTA------GAT--TGTTGAT---A---AGGA--A-A-AGT-AATGG-CA-TG-TT-AAAAA---------TAATCC----GAACATGTGCC--TGCT------GA-------TC---GATACGTTTGTAT--AAAAGCCACGAAGAGTAGTTT---T---TTAA--A--AGTCATGCCACGAAATTCAATCCTGTGTGTCCAAGGAGCTGCA--GATAT-GCTACATG------AAGTGG---AAAA---GAATAAG--ACTTT--ACTCTT--T-GGCCGCCGCACTA------ACACCGCAAG----TAACA-----------CACAC---------------A--GCTTG-AGA--AACTGT--GCTCACGAATTGA--AATG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGAGGAAATCAG-AAGAAAAAGGACCAC--ATATATGA------ATAGCACAAAAAAGATTATCACAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|10 : GA--TTTTA-AAAAT-GATC-AATTA-----T-T-ACA----TGATACATGTATG--T-------GAGG-TG-AAA-ATAAATAATTTT-TCAAGACATTTC--C-C-CC--TTCACAATATCAA-TTGAG----AAG----T----AAAACAAA--TATTTTCAACTAAAAT---------CAAAATGAA-TA----TACCAATATTGT---TTG----------------GTTTTGTTTTACGTAT--ATGTATGCACA-TC--------AA---T---TCTTT-TCTATTACATGTACTTGCTTGTTCACATGTGAATAA---AGACACGCATGA------TTGG--AA-TGTACATCTA--C----ATGTA------GAT--TGTT-AT---ACT-AGTATTG-A-GGTCAATAGGCACTGGTT---------------CAATCCCATCAAACATTTGTCCGTGCT------GA-------TC---GATACATTT
gi|11 : tgaGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-A-------T--A--TCTTAG-GAC---AC--------------G------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAACAACGTTAG--ACTTAGGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------AAAC--TTTTGTT-----TAC-ATCATTTTTCGAGTGAAATA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCATC-TTTA-GTTTAATACAT------AGAAATGGG-A--AACAA-AT--AA-TATTGATT-T--AATTTC-GG-GAAA------T----A-TCACTT------ATTTCAA-
gi|12 : -------CCC-CCCCCCCCAATAAAAACT-CCAAGCAA---AAAAAAAATCAGCTTC--AATTGCATGAAATTTTA-AAAA-TGACC-AGATA-----T-T-ATA----TGATA------TG--T-------GGGGTTA-AAA-T-AAACGATTAT-TTAAGACATTTTCCC-C-C---TTCACATTATCAA-TTGAGAAGTAAG----A----CAAATAA---TATTTTCAACTACAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTATCTACATATGTTTGCAGA-TC--------AATTCT---T---T-TCTATTAC------TTTCTTGTTTACATGTGAATAA---AGATACGAATGA------Tactacgaaatatattt
gi|13 : cccGGGCCT-GGTT---TTTG-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-A-------T--A--TCTTAG-GAC---A--------------AG------TC------TAGGACT--AT-CTTACGACAATAGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAA---CATTGA--ACTTAAGATGGTCTTAGGATTG-TCGTAAAATTAT----CAAACTTTTA-----TT---TT-----TAC-ATCGTTTTACGGGTAAAAGA--GTATTATAACATTAAATT--AAA-TTTAAACATA---------TTGAA---------------------ATG-----GGAAA----------CAA-AT--AATT-TTGATT-T--AATTCC-GA-AAAATATATGTAACGA-ATATTT------ATAT--A-TCA---GTTATTT-----C---------------A--AA----C-----T-ACGAAA--Tatattgttatactagtattgtggacaata
gi|14 : TTGTAT--AAAAGCAACAAAGAGTAGTTTCTGT---TGAA--A--AACCATGCCAGGAAATCCAAAGATACGCGACCGGGGAGGTGAA--GACATCACAACAGG------GTGTGG---AAAA---GAATAAAATA--TT--ACCCTTTAT-AGCCGCCTCAATA------ACTCCCCAACAATATAACAACCCCCCCCCCC-CCCT--CA---------AA---------AA--AAAGGT--G---GGGAATTAA--AACG--CT---GTCTATGATACAGat
gi|15 : aactacccctgcttttccgaaataTGGTATCAATATTG-TCGTAAGATT----------------------T---TTAAAAATAT-ATC--TTTAGGGATGAAAAAA-GTATTATAGCAATCTATTTCAAA-CAAAATAGTGCAAATTATTTTA----C--C-GATA-GTTTCATACAT-------------------------AT--AA-T-TTGA-T-TT-AATTTC-GG-AAAA------TAACGA-ACATTT------AGATCAA-T-------TATTT-----CAAAA------G----ATGAA----A-----T-ACgattgtcgttagatcagcaaacg
gi|16 : CTT-GGTT---ATCG-----AAAGTATGCTCAG-----AC-TGA------CGC-C----AAGAT-AT--C---------TCTTAGTAAC---A--------------AA------TTT-----TAGGAAT--AT-TGGAGGACAATCAAGAACTGTAAAT---------CTAAGCTGCCTT-ACGATTGTT-C----TGACAAAGCTGACCCTA--GGATGGTCTTAGAATTA-TTGCAAAATTTT----C--------ACT---TT---TT-----TAC-Agt
gi|17 : aGCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGTT-AT---A---
gi|17 : aaTTGTGT--AAAAACAAC-----TTTGTAT---T----GAA--ACAAG-CATGCCATGAAACCCAATCTTCCGTATC-AAGGAGCTGAA--GATATTGCTACACG------AGGTTG---GAAA---GAATAAT--A--Tttaaagacccgccatgaaaaagaaatattgtgtaaaaacaactttgtattgaaacaagcatgccatgaaacccaatcttccgtatcaaggagctgaagatattgctacacgaggttggaaagaataatatctat
gi|18 : aagcatgattggaatgtacatgtacattgttatattaaagacccgccatgaaaaagaaataTGA-CCAATTA-----T-T-ATA----TGATA------TG--T-------GAAG-TA-AAA-----ATAAT---------ACATTTT--C-C-CCCCTTCACAATGTCAA-TTGAG----AAG----A----CAAATAA---TATTTTCAACTAAAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCActat
gi|19 : aa--GGGGCTT-GGAT---GTTG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-A-------T--G--TCTTAA-GAC---AA---GTGTTGGGACAG------TCT--------GACT--AT-CTTAGGACAATCGTTAATTGTAAATNTTTGTAAACAAATGCGTTTTAAAGACCC-T-C----TAA
gi|2 : AAAA--ATATTATAACATTAATTTTCAAA-CAACAAATTGAAAATTCTTTTGAAATCA-CCGTTA-GTTTTATGCATGCATGTAGAAAT-GG-----GGAA-A----A-T-TAGA-TAT--AGTTTC-AG-AAAA------TAACGA-ACATTTTGATTTATATCAA-TGA-----TAT-------CAAAATATGAAA----A--AA----CATT--T-ATAAAAGTTT--AAAAA---------------TCCGTCAAT------T--------------------TCA--------ATTGCATGA--AATAA-AAAAAAGA-C-TATTAATACATGT-ATA----TGATA------TG--T-------GAGG-TG-AAA-ATAAATGATTAT-TTAAGACATTTT--T-CAC---TCCACAATGCCAG-TTGAG----AAGTACGA----CAAACAA---TATTTTCAACTAAAAT-AAACATATTAAAAT-AAATA----TGCCAATTTTGT---TTGC---T---------AAAAATTGCTT---------A-GTATGCACA-TC--------TA---T---T---TCTCT-CTA-----------TTGTTTA----------A---AGACGCACATGA------TTGA--AAATGCAC----A--CGTTCATGTA------TAT--TGTT-AT---ATCAAGGA--T-A-TGT-AATGGGCAATGGTT-AAAAAA--------GAAGCCCACTAAACATTTACCCGTGCTTTTCCGGAATATATATC---GATACGAT-GTAT--AAAA----------TTATTTTATAT---TGAA--A--ACTCGTGTCACTAAATCCAAACGTGCGTGCCCGATGAGCTGCG--GATATTGCTACACG------AGGTGG---AAAT---GAATAAG--A--CTTGAATCTT--T-AACCGCCTCACTA------ACATTGCAAC----TAACG-----------C-CGCT--GA---------AAAGGATTG-GGA--AACATT----TCACGAATCAA--AACG--CT---GTCAACGGTGCAGACCATGTTAGGACGGTAGACGAAATCAG-GAAGAAATGGACCAT--ATACATGATTACATGTAACACAAAAAAGAT---CAAAATTTTC-TGGCAA----------ATCTTAA-ATACGTTGC-----TTGACGacactaataaaaataa
gi|2 : AAAATTTTCT--GGCAAATCTTAA----------------------ATAC-GTTG-----CT-----T--------GAC--GTCCTTAAGAT-TGAGTCTTA-TCTTTGG-ACtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatc--GTCT-TAGGAC-CGAAACTCG-CCTTAGG-ATG--G--TCTTGGACCATACTCAAGTC--AT--TGGACAT-G-TT---TTCG-----ATTGAGTTCTAAGTTAGTAT-CCG------TCC-A----AAGATAAGA-C---TCAA--TCTTAA-GG----AC---GTCggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttCT-GGTT---TTCG-----AAAGTGTCTTAGG-----AC-CGA---------------A-------A-C---T-------------------C---GCCTTAGGATGG------TCT-----T-GGACC--ATACTCAAGTCAactttcgaaaaccagcctggggctctta
gi|20 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttgacgtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaaTATCCTAAG-----AT-CGA------CCC-T----AAGAT-ACA-----T--A--T--TGG-GAC---AA---ATTGTAGGACAG------TAT-----TAGGACT--AT-CTTAGGACAATCATAAATTGTACAT---------CCAAAATGTCTT-AAAATTG-T-C----CAAG--CAT--G--ATT--GGAcctggggctctta
gi|20 : GCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGTT-AT---A---atgtacatgtacattgttatattaaagac
gi|21 : tatcctaagatcgaccctaagatacatattgggacaaattgtaggacagtattaggactatcttaggacaatcataaattgtacatccaaaatgtcttaaaattgtccaa--GGGACTT-GGTT---TTCA-----AACGTATCCTAAG-----AC-TGA------CCC-T----AAGAT-AT-----------------G-GAC---AA---GTCTAAGAGCAA------TCT-----TAATACT--AT-CTT---------------TGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----T--------------TT--AAAAGGTTTTAGGATTG-TCGTAAGATTTT----C--------A-----TT---TT---------ATTATTTttaaagac
gi|22 : GGATTG-TCGTTAGATCAG----C--------AAACG-TT---TT-----TAC-ATCATTTTATGGGTGAAAGA--GTATTATAAAATTAATATTCAAG-CCAAAAAACAAGTATTCTTTTGAAATCACC-GTTA-GTTCAAAACAT------AAAAAT-GGAA--AACAA-AT--AA-
gi|23 : --GGGGCCT-GGTT---TTCA-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-ATA-----------TCTTAG-GAC---AA---GTCTTAGGACAG------TCC-----TAGGATT--AT-CTTACGACAATCGCAAATTGTAAAT---------CAACTGTGTCTT-AAGATTG-TCC----TAAC--
gi|24 : tTGC---T---------TAGTTTATTTTTA-------ACGTATACACA-TC--------CC---TCCCT---T-CCTATTGC------GTGCTTGTGTACATGTGAATAA---AGACGCGCACGACTAGTTCTGG--AA-TGT------A--C----ATGCA------
gi|25 : agcAACATACGTGTCTGAGGAGCTGCG--GCTATCGCTACATA------AAGTAG---AAAA---AAAT---------------CTT--T-AGCCGCCTCACTA------ATACAACAAC----TAACG-----------C-CGCT--AA---------AA---C----------ACTGT--GCTGACtgt
gi|26 : ---T---TGAA--A--CATCATGCCACGAAATCAAAA--TACGTGTCTGAGGAGCTGCG--GCTATCGCTATATG------AAGTAG---AAAC---AAA---------------TCTT--T-AGCCGCCTTACTA------ATACTACAAC----
gi|27 : ta--AT-CTTAGGACAATCGTAAATTGTAAAT---------CAGAGAT-TCTT-AAGATTG-T-CCTAGTAAC-------G--A--------AGTCCTATGATTG-TCGTAAGATCATCACAC--------A-----TT---TT-----T
gi|28 : A------A----A--AA----A-----T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAAA------TTA--TG----------------AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-gt
gi|29 : CT-GGTT---TTCG-----AAAGTCTCTTGTG-----AC-TGAAACATGTCT-T----TGGAT-G----------A--TCTTTG-GAC---AT---GT-TTA----AG------TCA-----TAAGACa
gi|29 : catAT--GTCC-AAAGA--------TCA-TCCAAAG-ACA-TG--TTTCAGTC----------AC--AA--GAGAC------T---TTCG-----AAAc
gi|3 : catgtcttatgacttaaacAAAGAATTAAAATTCTTTTGAATTCA-CAGTTA-GAATAATACAC------AGAAAT-GG-G---GAAA-ATTTGA-T-TTAA-T-TC-AATTTC-GG-AAAA------TAACAA-TCATTT------AT-TCAA-T-------TATTT-----CAAAAGATG--A----A--AAACATT-----T-ACAAGA--TT--GAaccagc
gi|3 : ataTTCAAT------TTC------GGAAAATAACAATCA--TT---TATTCAATTA--TTTCA-AAAGATGA-A-AAACA-----T-TTACAAGATTGATT------TGACCAATTATAGAGG-TGCAAA-TAAA----------TAAA----TTT--C-C-C---TTC-TAATATCAA-CTGAG----ACGTA--A----GAAAGAGATTTTTTTTCAACTAAAAT-AAA----TAAAATTGAAATGAATATACCAATATTGT---GTGT---TAATAACTGCTAGTGTT-TTTTA---AC--AT--ATGCACA-TCTAGCCCTTAA---T---T---T--CTATGAC------TTGCTTGTTTACATATGAA-----------------A------TTAG--AA-TGCA--------C----ATGTA------TAT--TGTT-AT---ATGAAGGA--ACA-AGT-AATGGGCAATGGTT-AAAAAATAAGCGCATAAGCCCGCCAAACATTCATCCATGCT------TT-------TCTCGAATA----TGTAT--AAAAACAACGAACATTAGTTT---TCATTAAA--A--AGTCATGCCACGAAATCCAAACTTTCGTGCCCGAGGAGCTGCG--GGTATTACTACATGTACATGAAGTGGTCCAAAA---GAAT-----------------T--T-AGCCGCCTCACTACATGTAACACCGCAAC----TGATG-----------C-AGCT--AACAAAAAAAAAA--GCTTGCGGA--AACTGT--GCTCACGAATTAATTCACAGTCTAGAGTCAACGATAAAGACCATGATAACACGGTGAACGAAATCAG-AAAGAAATGGGCCAC--ATACATGA------GTAGCATGCAAAAGATTATCATAA----------AA---TAAGACCATCCTAAGACATGTTGCTAAAATTGACGtttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataagaccatcctaagacatgttgctaaaattgacgtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaaAAGATTATCATAAAAT-----------------AAGACCA---TC---CT----AAGACAT-GTTG-----CTAAAATT--------GAC--GTCC-TAAGAT-TGAATCTTA-TTTTTAG-A-A-CGAATCTAA--CC-----TAGGAtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaGTTTTA---CTGAGGACA-TG--CATAAGTCA-----TCAGACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATA-----AG-----ATTCAA------TCT-T----AGGAC-GT--C---A--A--TTTTAGCAAC---AT---GTCTTAGGATGG------TCT-----------T--AT-TTTATGATAATCttcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaaAAAT--AA--GGACCCA-GGTT---TTCG-----AAAGTGTACGAGG-----AT--GG------TTT-TACTGAGGAC-ATG-CA--T--AAGTCATCA-GACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATAAGATTCAAT-CTTAGGAC-GTC---AATTTTAG-----------C-AACATGTCTT-AGGATGG-T-C----Tcatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|30 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataAA-AT--TA-T-TTAA-T-CTCAATTCC-TG-AAAA------TAACGACACATTT------ATATCAA--TA---G---TTT-----CAAAA------A----G--Aatataattggagatta
gi|31 : aGACCA---TT---CT----AACAAAT-GCTG-----CT-----T--------GGC--ATCC-TAAGAT-TGAATCTTA-TCtgaaaacat
gi|32 : gattaacaccacaatatatc--GGGGCTT-GGTT---TTCA-----AAAGTGTTCTAAG-----AT-CTA------TCCTT----AAGAC-A
gi|34 : ctctCCTGCCAAACATTTATCCGTGCT------TT-------TCCGGGATG---TTGTAT--AAAAGCAACagtttta
gi|36 : g--GGGGTCT-G-TT---TTCG-----AAAGTATTCTAA------AT-TGA------TC
gi|39 : tggaagcctA--AGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----
gi|4 : -T-T--AATTCCCAG-AAAA-------AAAAA-GCATTT------ATATCA--TT------TATTT-----CCAAA------AGACGA--AA----TGCATTT-ACAAAA--TTGTAAAAAAA-------------------AAT------C-C----------AATAA----CT--TCA---ATTGCATGA--GATTATAAAATTGA-C-CA-----------------------A------TG--C-------AAGG-TA-AAAATAAAATA-TTAT-TTAAGACATTTT--TTC-C---TTCACAATGTCAA-T-GAG----AAG----AAAGGCAAACAA---TATTTTCAACTGAAAT-AAA-----CGATATTAAATAAATATACCAGTAGTGT---TT-----------------------TTTAAAATA---ATATATGCACA-CC---------------------------TTAC------TTGCTTGTTTACGTGTGAATAATAAAGACGAGCATGA------TTGA--AA-TGCA-----AGTC----ATGTA------CAT---GT--------------A--C-ATAGT-TATAT-CAA--GTT-AAAG----------TAA--------AACATTTAGCCAT-------------------------TA-----GTAT--AAGA-CAACGAAGATTAGTTT---T---TG--------------CCACGAAATCCA-TCTTATGTGTCCGAGGAGCTGCG--GATATTGCTACACA------AAGTGG---AAAAAAAGAATAAG--ACTTT--ACTCTT--T-AGCCGCCTCACTA------ACACTACAAC----TAACG-----------T-CGTT--AA---------A----------------CTAT--GCTCACGAATT------CG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCAACAAG--AATGGACCACATATACATGA------A---CACAAAAAACATTATCACAACATTCGCGATAATCTTAAGATC------------GTTGC-----TTGACG
gi|4 : AACATTATCACAACATTC-GC--GATAA-TCTTAAGATCG---T--------------------TG-----CT-----T--------GAC--GTCC-TAAGAT-TTAATCTTA-TCATGGG---A-TG------AATCC-----TAA-------------CTT-------------------AGCA--CTAAG-----AC-C-A------TCC-T----AAGGC-ATGTC---TCAA--TCCTAA-GAC---ACT--GTCtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagaccatcctaaggcatgtctcaatcctaagacactgtcgaaaatcagggtccaggtttaaagaaattagtaatta
gi|4 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaC--ATCC-TAAGGCATG--TCTCAATCCTAAG-ACACTG--TC---G---------AAAAT--CA--GGGTCCA-GGTT---T--------AAAGgaaaatcagggtccaggtttaaagaaattagtaatta
gi|5 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaaacattatcacaacattcgcgataatcttaagatcgttgcttgacgtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagacCAACTAAAAT-AAAA---TCAAAATGAA-TA----TACAAGTATTGT---TTG----------------GTTTTGTTTTACGTAC--ATGTATTCACA-TG--------GA---T---TCTTT-TCTATTAC------TTGCTTGTTTCCATGTGA-TAA---AGACACGCATGA------TTGG--AA-TGTA--------C----ATGTA------CATACTAGT-ATT--G---AAGA--C-A-A-T-A-TAGGCACTGGTTCAAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTATTTAAAAGCAACGAGGAGTAGTTT---T---TTTTTTA--AGTCATGCCACGAAATCCAACATTGCGTGTCCAAGGAGCTGCA--CATATTGCTACATG------AAGTGG---GAA-----------------T--ACTCTT--TTAACCGCTTCACTA------AC-CCGCAAG----TAACG-----------C-AGCTTAAA---------AA--GCTAG-GTATAAACTGT--GTTCACGAATTGA--AACG--CT---GTCAACGATACAAACCATGTTAGGACTGCGGAGGAAATCCG-AAGGAAAAGGACTAC--ATACATGA------ATAGCAAAATAAAGATTATCATAACTTTCGCAACAATCTTAAGACCATCTTAAGACATGTTGC-----TTGACGaaattagtaatta
gi|6 : --GGGGCCT-GGTT---TTCG-----AAAGAATCCTAAG-----AT-TGA------TCC-T----AAGAT-ATA-----------TCTTAG-GAC---AC---GTCTTAGGACAG------TGT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATCA-TCC----TAAtc
gi|6 : cctATGTGAATAA---AGACGGGCATGAATT---TTAA--AAGTGTA--------C----ATGTAGGCCCGTAT--TGTT-ATTTCA---AGGA--C-A-AGT-ATTGGGCAATGGTTCAAAAA---------TAACCTCGCCAAGCATCTATCAGGGCTTTTTCGGACCATCTTTC---GATTCGTTAGTAT--AAAAGCAACGAAAATTAGCTTTTAT---TGAA--A--AGTCATGCCACGGAATCCAAACTT-CACGTCCGAGGAATTGCG--GATATTGCTGCATG------AAGTG-----------------G--A--TT--AC--------A--------ACTA------A---GGCAGC----TAA---------------------AAAGA------AA--GCCTG-AGA--ATCTGTTGGTGGAAAAGTT----AATG--CC---GTCAACGACACAGAtgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|7 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatccta--GGGGATT-GGAT---TTCG-----AAA--AGCCTAG---------------------------AAGAT-ATA-T---T-------TTAG-GAA---AT---GTCTTTGGACAG------TCT-----TAGGGCT--AT-CTTAGGACAATCG-------TAAAT---------CAAAGCTATCTT------TG-T-C----T---------------------TG-TCGTAAGATTA-TC-TGA---TAT----C--------ACACTTTT---TT-----CGC-ATCATTATACGAATAAAAAAAAGTATCATAGCATTA---------------AAATTAAAATTCTTTTGAAATCA-C-TATACATTTAATACA-G-----AGAAAT-GG-G--GGAAA-AT--AA-A-TT---T-T---ATCCT-GG-AAAA------TAACGA-CCATAT------ATA-CAT-TTA---------------CAAAA------A----A--A-----------T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAA----A--TTA-----------------TG-AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG------AAAATAAT
gi|8 : tT-ATAAA---------TAATCCCGCCAAACATATGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAGGAGTAGTTT---T---TTAC------GTCATGCCATGAAATCCAATCTTGCGTGTCCAATGAGCTGCACAGATATTGCTTCATG------AAGTGG---AAAA---GAAAAAG--TCTTT--GCACTT--T-ACCAGCGTCACTC------ACACCGCAGG----TA-------------------T--AG---------TA--GCTTG-GTA--AACTGT--GTTCATGAAATGA--AATG--CT---GTCAACGACACAGATCATATTAGGACGGTGGAGGAAATCAG-AAGGAAAAGGACCAC--GTACATGA------ATAGGACAAAAAAGATTATCATAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----
gi|9 : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTTC-----TAGATTT---CT-------GGA--TGT-TTAACATTCTAA-AACATGTTACTTGTCGT-TCTC-AGATTGAATTCGATCTATTAAAGACGCAGTCGAATGTCT-----TATAATTTAGACATGTCC-TACGAC--------CA-TCCTAAG-AAA-TG--TCTCAGTCC-----TAAGAC--A
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33 ): CTAAATCATTTAACTTGAAATAAGTAATTAGTTAACACCAAGTGTCTCACAGA
Unaligned ( gi|35 ): TTGACCTTAGGATGATATTATAATTATTAAAATCTTCACTTTTT
Unaligned ( gi|37 ): AGTAAATGTTTATGGAAGATTTTTTTAATCAATATATTTT
Unaligned ( gi|38 ): AAATCACTAATACCACTCCGTTTAAATATCAGAGATAAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 11 22222 1 333333333 222222 22222 333333333333 11 1 55555555555555555555555555555555555555555555555555555555555555555555555 111111 1111111111111111 4444444444444 1111 111111111 1 66666666666666666 5555555555555555555 11111 11 111111 3333333333333333333333 11 111111 111111 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11111 111111 1111111111 111 1111 111 1111 222222222 1111 1 11111 33333 111 3333333333333333 2222222 444444444444444444444444 111111 111111 33333333 1111111 2222222 1111 1 2222222222 55555555555555555555 222 111111 4444444444444444 111111 666666666666666666666666666666666666666666666 1111 111111 11111
lowQualScore : 3333 88 1 22 55555 1 5 888888888 1 1 1 1 1 1 1 1 999999 66666 1 333333333333 88 5 1 8 7 0 44444444444444444444444444444444444444444444444444444444444444444444444 66 4 111111 4 0 4 2 5 6666666666666666 1 66 33 0 2 333 55555 55555 44 666666 2 5555 2 8888888888888 5 444 3333 0 11 888888 77777 33 2 44 333333333 3 3 3 7777 1 22222222222222222 4 0 2 0000000000000000000 777 11111 5 0 5 0 33 0 33 1 5 3 00 3 666666 5 0 6666666666666666666666 4 66 4 5 0 8 4 55 4 4 222222 1 55 66 222222 2 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 5 3 8 4 2 11111 4 4 9999 222222 9999999999 4 4 777 0 6666 1111 5 555 5 2222 666666666 0 5555 0 55555 3 3 22222 777 8888888888888888 2 4 1111111 5 444444444444444444444444 0 444444 777 666666 55 8 55555555 8888 2222222 66 4 9999999 4444 5 5 1 4 4 0 5555555555 5 0 44444444444444444444 888 55 3 0 0 1 111 777 99999 111 4 55 4 2 000000 666 8888 4444444444444444 55 4 0 111111 0 8888 0 222222222222222222222222222222222222222222222 66 3 2222 66 888 1 6 1 1 99 999999 0 1 44 7 2 66666
lowQualScore : .... .. . .. ..... . . ......... . . . . . . . . ...... ..... . ............ .. . . . . . ....................................................................... .. . ...... . . . . . ................ . .. .. . . ... ..... ..... .. ...... . .... . ............. . ... .... . .. ...... ..... .. . .. ......... . . . .... . ................. . . . ................... ... ..... . . . . .. . .. . . . .. . ...... . . ...................... . .. . . . . . .. . . ...... . .. .. ...... . ............................................................................................................................................. . . . . . ..... . . .... ...... .......... . . ... . .... .... . ... . .... ......... . .... . ..... . . ..... ... ................ . . ....... . ........................ . ...... ... ...... .. . ........ .... ....... .. . ....... .... . . . . . . .......... . . .................... ... .. . . . . ... ... ..... ... . .. . . ...... ... .... ................ .. . . ...... . .... . ............................................. .. . .... .. ... . . . . .. ...... . . .. . . .....
lowQualScore : 5555 00 0 00 55555 0 5 000000000 0 0 0 0 0 0 0 0 555555 55555 0 555555555555 00 5 0 8 0 6 00000000000000000000000000000000000000000000000000000000000000000000000 11 4 999999 0 1 4 9 0 4444444444444444 9 99 77 2 0 555 00000 33333 44 444444 4 0000 4 9999999999999 0 444 4444 4 44 222222 11111 99 9 88 333333333 3 3 3 1111 3 99999999999999999 4 9 2 9999999999999999999 888 11111 0 1 2 4 66 7 66 4 7 0 44 4 222222 0 2 0000000000000000000000 4 11 4 0 2 9 4 00 4 4 888888 1 66 11 888888 2 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 6 9 4 2 11111 4 4 4444 888888 4444444444 4 4 777 1 6666 7777 7 777 7 1111 999999999 4 9999 0 88888 2 2 00000 555 0000000000000000 9 8 2222222 0 444444444444444444444444 1 444444 888 888888 55 0 00000000 5555 4444444 11 4 2222222 6666 7 7 7 3 9 0 1111111111 0 1 22222222222222222222 777 55 2 1 1 7 000 000 33333 555 9 00 7 5 555555 444 5555 7777777777777777 55 0 7 555555 9 5555 1 222222222222222222222222222222222222222222222 11 7 4444 99 888 0 7 0 0 22 222222 3 0 77 3 5 77777
consensus : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-ATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATT--T------ATATCAA--T---TATATTT-----CAAA-----A------AA---AAC-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGTT-AT---A---AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TGAA--A--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTCTT--T-AGCCGCCTCACTA------ACACCGCAAC----TAACG-----------C-CGCT--AA---------AA--GCTTG-GGA--AACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
Reference ( family-873 ) : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-ATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATT--T------ATATCAA--T---TATATTT-----CAAA-----A------AA---AAC-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGTT-AT---A---AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TGAA--A--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTCTT--T-AGCCGCCTCACTA------ACACCGCAAC----TAACG-----------C-CGCT--AA---------AA--GCTTG-GGA--AACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|1 : CAAACA----TTTTA--CAAAGTTCATAGATTAATGGGCGTGAACGTCTG-TATC---------TACGTACAATTTGCTCGTCATCCATATAGTCCAATGGGCTGTCCCTATCTCGAAATATTCTATTACGACGGACCTTGTGAGCTTGTCTTTGTAGTAGTAAGTAAACAGCAGCCATATTTGTTTTCG-TGTTTTGTCTTATATTTAGCCTCTAACACGGATCTGTATTAAGATTAT-ATGAAATCTTAT--GACAT-TCTTAAGCCCG---TC---CT----AAGTCAT-GTTG-----CT-----T--------GAT--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TTTCAGTCC-----TAAGAT--AA--GGGTCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-ATA-CATGT--A--TCTTAA-GAC---AC---GTCTTAGGACAG------ACT-----TAGGACT--AT-CTTAGGACAATCGCAAAGTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTATGATTGGTCGTAAAATTAT----CT-------A-----TT---TT-----TAAGATTATGT-A-GGGTGCAAGA--GTATTATAA-ATTAAATTTCAAAACCAAAAAATGAAAATTTCTTTTAAATTA-C-TTAA-GTTTAATAGATA-----AGACAT-GT-ATAAGAAACAT--AG-T-TTGA-T-T--AATTCC-GGGAAAA------TAA-GA-ACATT--T------ATTTCAAACTACGCATATTTTTGGCCAAA-----A------AA---AAC-----TGATAAA----T--AAAAAGAGAAGCCCCCC-CCTCCTCCAAT------T-C------G---AATAAAAATTAG-TTAAATATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--T-------GAAT-TG-AAA-TAAAATAATTATATTAAGACAATTT--G-C-C---TTCACAATGTCAAATTGAG----AAG----A----CAAATA----TAATTTTAACTAAA-T-AAA----TCAAAATGAAATAA---TACAATTATTGT---TTGTCCGT---------TGGTTTTATTT-ACGTA---ATGT-TGAATAATT--------AA---T---T---T-TCTATTAC------TTG-TTGTTTACATGTGAATAA---AGACACGCATGA------TTGGGAAA-TGTA-----A--C----ATGTA------GAT--TGTTGAT---A---AGGA--A-A-AGT-AATGG-CA-TG-TT-AAAAA---------TAATCC----GAACATGTGCC--TGCT------GA-------TC---GATACGTTTGTAT--AAAAGCCACGAAGAGTAGTTT---T---TTAA--A--AGTCATGCCACGAAATTCAATCCTGTGTGTCCAAGGAGCTGCA--GATAT-GCTACATG------AAGTGG---AAAA---GAATAAG--ACTTT--ACTCTT--T-GGCCGCCGCACTA------ACACCGCAAG----TAACA-----------CACAC---------------A--GCTTG-AGA--AACTGT--GCTCACGAATTGA--AATG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGAGGAAATCAG-AAGAAAAAGGACCAC--ATATATGA------ATAGCACAAAAAAGATTATCACAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|10 : GA--TTTTA-AAAAT-GATC-AATTA-----T-T-ACA----TGATACATGTATG--T-------GAGG-TG-AAA-ATAAATAATTTT-TCAAGACATTTC--C-C-CC--TTCACAATATCAA-TTGAG----AAG----T----AAAACAAA--TATTTTCAACTAAAAT---------CAAAATGAA-TA----TACCAATATTGT---TTG----------------GTTTTGTTTTACGTAT--ATGTATGCACA-TC--------AA---T---TCTTT-TCTATTACATGTACTTGCTTGTTCACATGTGAATAA---AGACACGCATGA------TTGG--AA-TGTACATCTA--C----ATGTA------GAT--TGTT-AT---ACT-AGTATTG-A-GGTCAATAGGCACTGGTT---------------CAATCCCATCAAACATTTGTCCGTGCT------GA-------TC---GATACATTT
gi|11 : tgaGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-A-------T--A--TCTTAG-GAC---AC--------------G------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAACAACGTTAG--ACTTAGGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------AAAC--TTTTGTT-----TAC-ATCATTTTTCGAGTGAAATA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCATC-TTTA-GTTTAATACAT------AGAAATGGG-A--AACAA-AT--AA-TATTGATT-T--AATTTC-GG-GAAA------T----A-TCACT--T------ATTTCAA--
gi|12 : -------CCC-CCCCCCCCAATAAAAACT-CCAAGCAA---AAAAAAAATCAGCTTC--AATTGCATGAAATTTTA-AAAA-TGACC-AGATA-----T-T-ATA----TGATA------TG--T-------GGGGTTA-AAA-T-AAACGATTAT-TTAAGACATTTTCCC-C-C---TTCACATTATCAA-TTGAGAAGTAAG----A----CAAATAA---TATTTTCAACTACAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTATCTACATATGTTTGCAGA-TC--------AATTCT---T---T-TCTATTAC------TTTCTTGTTTACATGTGAATAA---AGATACGAATGA------Tactacgaaatatattt
gi|13 : cccGGGCCT-GGTT---TTTG-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-A-------T--A--TCTTAG-GAC---A--------------AG------TC------TAGGACT--AT-CTTACGACAATAGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAA---CATTGA--ACTTAAGATGGTCTTAGGATTG-TCGTAAAATTAT----CAAACTTTTA-----TT---TT-----TAC-ATCGTTTTACGGGTAAAAGA--GTATTATAACATTAAATT--AAA-TTTAAACATA---------TTGAA---------------------ATG-----GGAAA----------CAA-AT--AATT-TTGATT-T--AATTCC-GA-AAAATATATGTAACGA-ATATTTAT------ATATCAG--T-----TATTT-----C----------------A---AAC-----T-ACGAAA--Tatattgttatactagtattgtggacaata
gi|14 : TTGTAT--AAAAGCAACAAAGAGTAGTTTCTGT---TGAA--A--AACCATGCCAGGAAATCCAAAGATACGCGACCGGGGAGGTGAA--GACATCACAACAGG------GTGTGG---AAAA---GAATAAAATA--TT--ACCCTTTAT-AGCCGCCTCAATA------ACTCCCCAACAATATAACAACCCCCCCCCCC-CCCT--CA---------AA---------AA--AAAGGT--G---GGGAATTAA--AACG--CT---GTCTATGATACAGat
gi|15 : aactacccctgcttttccgaaataTGGTATCAATATTG-TCGTAAGATT----------------------T---TTAAAAATAT-ATC--TTTAGGGATGAAAAAA-GTATTATAGCAATCTATTTCAAA-CAAAATAGTGCAAATTATTTTA----C--C-GATA-GTTTCATACAT-------------------------AT--AA-T-TTGA-T-TT-AATTTC-GG-AAAA------TAACGA-ACATT--T------AGATCAA--T-----TATTT-----CAAA-----A------GATG-AAA-----T-ACgattgtcgttagatcagcaaacg
gi|16 : CTT-GGTT---ATCG-----AAAGTATGCTCAG-----AC-TGA------CGC-C----AAGAT-AT--C---------TCTTAGTAAC---A--------------AA------TTT-----TAGGAAT--AT-TGGAGGACAATCAAGAACTGTAAAT---------CTAAGCTGCCTT-ACGATTGTT-C----TGACAAAGCTGACCCTA--GGATGGTCTTAGAATTA-TTGCAAAATTTT----C--------ACT---TT---TT-----TAC-Agt
gi|17 : aGCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGTT-AT---A---
gi|17 : aaTTGTGT--AAAAACAAC-----TTTGTAT---T----GAA--ACAAG-CATGCCATGAAACCCAATCTTCCGTATC-AAGGAGCTGAA--GATATTGCTACACG------AGGTTG---GAAA---GAATAAT--A--Tttaaagacccgccatgaaaaagaaatattgtgtaaaaacaactttgtattgaaacaagcatgccatgaaacccaatcttccgtatcaaggagctgaagatattgctacacgaggttggaaagaataatatctat
gi|18 : aagcatgattggaatgtacatgtacattgttatattaaagacccgccatgaaaaagaaataTGA-CCAATTA-----T-T-ATA----TGATA------TG--T-------GAAG-TA-AAA-----ATAAT---------ACATTTT--C-C-CCCCTTCACAATGTCAA-TTGAG----AAG----A----CAAATAA---TATTTTCAACTAAAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCActat
gi|19 : aa--GGGGCTT-GGAT---GTTG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-A-------T--G--TCTTAA-GAC---AA---GTGTTGGGACAG------TCT--------GACT--AT-CTTAGGACAATCGTTAATTGTAAATNTTTGTAAACAAATGCGTTTTAAAGACCC-T-C----TAA
gi|2 : AAAA--ATATTATAACATTAATTTTCAAA-CAACAAATTGAAAATTCTTTTGAAATCA-CCGTTA-GTTTTATGCATGCATGTAGAAAT-GG-----GGAA-A----A-T-TAGA-TAT--AGTTTC-AG-AAAA------TAACGA-ACATT--TTGATTTATATCAA--T---GATAT-------CAAA-----ATATGAAAA---AACATT--T-ATAAAAGTTT--AAAAA---------------TCCGTCAAT------T--------------------TCA--------ATTGCATGA--AATAA-AAAAAAGA-C-TATTAATACATGT-ATA----TGATA------TG--T-------GAGG-TG-AAA-ATAAATGATTAT-TTAAGACATTTT--T-CAC---TCCACAATGCCAG-TTGAG----AAGTACGA----CAAACAA---TATTTTCAACTAAAAT-AAACATATTAAAAT-AAATA----TGCCAATTTTGT---TTGC---T---------AAAAATTGCTT---------A-GTATGCACA-TC--------TA---T---T---TCTCT-CTA-----------TTGTTTA----------A---AGACGCACATGA------TTGA--AAATGCAC----A--CGTTCATGTA------TAT--TGTT-AT---ATCAAGGA--T-A-TGT-AATGGGCAATGGTT-AAAAAA--------GAAGCCCACTAAACATTTACCCGTGCTTTTCCGGAATATATATC---GATACGAT-GTAT--AAAA----------TTATTTTATAT---TGAA--A--ACTCGTGTCACTAAATCCAAACGTGCGTGCCCGATGAGCTGCG--GATATTGCTACACG------AGGTGG---AAAT---GAATAAG--A--CTTGAATCTT--T-AACCGCCTCACTA------ACATTGCAAC----TAACG-----------C-CGCT--GA---------AAAGGATTG-GGA--AACATT----TCACGAATCAA--AACG--CT---GTCAACGGTGCAGACCATGTTAGGACGGTAGACGAAATCAG-GAAGAAATGGACCAT--ATACATGATTACATGTAACACAAAAAAGAT---CAAAATTTTC-TGGCAA----------ATCTTAA-ATACGTTGC-----TTGACGacactaataaaaataa
gi|2 : AAAATTTTCT--GGCAAATCTTAA----------------------ATAC-GTTG-----CT-----T--------GAC--GTCCTTAAGAT-TGAGTCTTA-TCTTTGG-ACtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatc--GTCT-TAGGAC-CGAAACTCG-CCTTAGG-ATG--G--TCTTGGACCATACTCAAGTC--AT--TGGACAT-G-TT---TTCG-----ATTGAGTTCTAAGTTAGTAT-CCG------TCC-A----AAGATAAGA-C---TCAA--TCTTAA-GG----AC---GTCggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttCT-GGTT---TTCG-----AAAGTGTCTTAGG-----AC-CGA---------------A-------A-C---T-------------------C---GCCTTAGGATGG------TCT-----T-GGACC--ATACTCAAGTCAactttcgaaaaccagcctggggctctta
gi|20 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttgacgtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaaTATCCTAAG-----AT-CGA------CCC-T----AAGAT-ACA-----T--A--T--TGG-GAC---AA---ATTGTAGGACAG------TAT-----TAGGACT--AT-CTTAGGACAATCATAAATTGTACAT---------CCAAAATGTCTT-AAAATTG-T-C----CAAG--CAT--G--ATT--GGAcctggggctctta
gi|20 : GCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGTT-AT---A---atgtacatgtacattgttatattaaagac
gi|21 : tatcctaagatcgaccctaagatacatattgggacaaattgtaggacagtattaggactatcttaggacaatcataaattgtacatccaaaatgtcttaaaattgtccaa--GGGACTT-GGTT---TTCA-----AACGTATCCTAAG-----AC-TGA------CCC-T----AAGAT-AT-----------------G-GAC---AA---GTCTAAGAGCAA------TCT-----TAATACT--AT-CTT---------------TGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----T--------------TT--AAAAGGTTTTAGGATTG-TCGTAAGATTTT----C--------A-----TT---TT---------ATTATTTttaaagac
gi|22 : GGATTG-TCGTTAGATCAG----C--------AAACG-TT---TT-----TAC-ATCATTTTATGGGTGAAAGA--GTATTATAAAATTAATATTCAAG-CCAAAAAACAAGTATTCTTTTGAAATCACC-GTTA-GTTCAAAACAT------AAAAAT-GGAA--AACAA-AT--AA-
gi|23 : --GGGGCCT-GGTT---TTCA-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-ATA-----------TCTTAG-GAC---AA---GTCTTAGGACAG------TCC-----TAGGATT--AT-CTTACGACAATCGCAAATTGTAAAT---------CAACTGTGTCTT-AAGATTG-TCC----TAAC--
gi|24 : tTGC---T---------TAGTTTATTTTTA-------ACGTATACACA-TC--------CC---TCCCT---T-CCTATTGC------GTGCTTGTGTACATGTGAATAA---AGACGCGCACGACTAGTTCTGG--AA-TGT------A--C----ATGCA------
gi|25 : agcAACATACGTGTCTGAGGAGCTGCG--GCTATCGCTACATA------AAGTAG---AAAA---AAAT---------------CTT--T-AGCCGCCTCACTA------ATACAACAAC----TAACG-----------C-CGCT--AA---------AA---C----------ACTGT--GCTGACtgt
gi|26 : ---T---TGAA--A--CATCATGCCACGAAATCAAAA--TACGTGTCTGAGGAGCTGCG--GCTATCGCTATATG------AAGTAG---AAAC---AAA---------------TCTT--T-AGCCGCCTTACTA------ATACTACAAC----
gi|27 : ta--AT-CTTAGGACAATCGTAAATTGTAAAT---------CAGAGAT-TCTT-AAGATTG-T-CCTAGTAAC-------G--A--------AGTCCTATGATTG-TCGTAAGATCATCACAC--------A-----TT---TT-----T
gi|28 : A-----A------AA---AAT--------CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAAA------TTA--TG----------------AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-gt
gi|29 : CT-GGTT---TTCG-----AAAGTCTCTTGTG-----AC-TGAAACATGTCT-T----TGGAT-G----------A--TCTTTG-GAC---AT---GT-TTA----AG------TCA-----TAAGACa
gi|29 : catAT--GTCC-AAAGA--------TCA-TCCAAAG-ACA-TG--TTTCAGTC----------AC--AA--GAGAC------T---TTCG-----AAAc
gi|3 : catgtcttatgacttaaacAAAGAATTAAAATTCTTTTGAATTCA-CAGTTA-GAATAATACAC------AGAAAT-GG-G---GAAA-ATTTGA-T-TTAA-T-TC-AATTTC-GG-AAAA------TAACAA-TCATT--T------AT-TCAA--T-----TATTT-----CAAAAGATGA------AA---AACATT--T-ACAAGA--TT--GAaccagc
gi|3 : ataTTCAAT------TTC------GGAAAATAACAATCA--TT---TATTCAATTA--TTTCA-AAAGATGA-A-AAACA-----T-TTACAAGATTGATT------TGACCAATTATAGAGG-TGCAAA-TAAA----------TAAA----TTT--C-C-C---TTC-TAATATCAA-CTGAG----ACGTA--A----GAAAGAGATTTTTTTTCAACTAAAAT-AAA----TAAAATTGAAATGAATATACCAATATTGT---GTGT---TAATAACTGCTAGTGTT-TTTTA---AC--AT--ATGCACA-TCTAGCCCTTAA---T---T---T--CTATGAC------TTGCTTGTTTACATATGAA-----------------A------TTAG--AA-TGCA--------C----ATGTA------TAT--TGTT-AT---ATGAAGGA--ACA-AGT-AATGGGCAATGGTT-AAAAAATAAGCGCATAAGCCCGCCAAACATTCATCCATGCT------TT-------TCTCGAATA----TGTAT--AAAAACAACGAACATTAGTTT---TCATTAAA--A--AGTCATGCCACGAAATCCAAACTTTCGTGCCCGAGGAGCTGCG--GGTATTACTACATGTACATGAAGTGGTCCAAAA---GAAT-----------------T--T-AGCCGCCTCACTACATGTAACACCGCAAC----TGATG-----------C-AGCT--AACAAAAAAAAAA--GCTTGCGGA--AACTGT--GCTCACGAATTAATTCACAGTCTAGAGTCAACGATAAAGACCATGATAACACGGTGAACGAAATCAG-AAAGAAATGGGCCAC--ATACATGA------GTAGCATGCAAAAGATTATCATAA----------AA---TAAGACCATCCTAAGACATGTTGCTAAAATTGACGtttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataagaccatcctaagacatgttgctaaaattgacgtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaaAAGATTATCATAAAAT-----------------AAGACCA---TC---CT----AAGACAT-GTTG-----CTAAAATT--------GAC--GTCC-TAAGAT-TGAATCTTA-TTTTTAG-A-A-CGAATCTAA--CC-----TAGGAtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaGTTTTA---CTGAGGACA-TG--CATAAGTCA-----TCAGACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATA-----AG-----ATTCAA------TCT-T----AGGAC-GT--C---A--A--TTTTAGCAAC---AT---GTCTTAGGATGG------TCT-----------T--AT-TTTATGATAATCttcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaaAAAT--AA--GGACCCA-GGTT---TTCG-----AAAGTGTACGAGG-----AT--GG------TTT-TACTGAGGAC-ATG-CA--T--AAGTCATCA-GACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATAAGATTCAAT-CTTAGGAC-GTC---AATTTTAG-----------C-AACATGTCTT-AGGATGG-T-C----Tcatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|30 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataAA-AT--TA-T-TTAA-T-CTCAATTCC-TG-AAAA------TAACGACACATT--T------ATATCAA------TA-GTTT-----CAAA-----A------AG---Aatataattggagatta
gi|31 : aGACCA---TT---CT----AACAAAT-GCTG-----CT-----T--------GGC--ATCC-TAAGAT-TGAATCTTA-TCtgaaaacat
gi|32 : gattaacaccacaatatatc--GGGGCTT-GGTT---TTCA-----AAAGTGTTCTAAG-----AT-CTA------TCCTT----AAGAC-A
gi|34 : ctctCCTGCCAAACATTTATCCGTGCT------TT-------TCCGGGATG---TTGTAT--AAAAGCAACagtttta
gi|36 : g--GGGGTCT-G-TT---TTCG-----AAAGTATTCTAA------AT-TGA------TC
gi|39 : tggaagcctA--AGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----
gi|4 : -T-T--AATTCCCAG-AAAA-------AAAAA-GCATT--T------ATATCAT--T---TAT-TTC-----CAAA-----A------GACGAAATGCATTT-ACAAAA--TTGTAAAAAAA-------------------AAT------C-C----------AATAA----CT--TCA---ATTGCATGA--GATTATAAAATTGA-C-CA-----------------------A------TG--C-------AAGG-TA-AAAATAAAATA-TTAT-TTAAGACATTTT--TTC-C---TTCACAATGTCAA-T-GAG----AAG----AAAGGCAAACAA---TATTTTCAACTGAAAT-AAA-----CGATATTAAATAAATATACCAGTAGTGT---TT-----------------------TTTAAAATA---ATATATGCACA-CC---------------------------TTAC------TTGCTTGTTTACGTGTGAATAATAAAGACGAGCATGA------TTGA--AA-TGCA-----AGTC----ATGTA------CAT---GT--------------A--C-ATAGT-TATAT-CAA--GTT-AAAG----------TAA--------AACATTTAGCCAT-------------------------TA-----GTAT--AAGA-CAACGAAGATTAGTTT---T---TG--------------CCACGAAATCCA-TCTTATGTGTCCGAGGAGCTGCG--GATATTGCTACACA------AAGTGG---AAAAAAAGAATAAG--ACTTT--ACTCTT--T-AGCCGCCTCACTA------ACACTACAAC----TAACG-----------T-CGTT--AA---------A----------------CTAT--GCTCACGAATT------CG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCAACAAG--AATGGACCACATATACATGA------A---CACAAAAAACATTATCACAACATTCGCGATAATCTTAAGATC------------GTTGC-----TTGACG
gi|4 : AACATTATCACAACATTC-GC--GATAA-TCTTAAGATCG---T--------------------TG-----CT-----T--------GAC--GTCC-TAAGAT-TTAATCTTA-TCATGGG---A-TG------AATCC-----TAA-------------CTT-------------------AGCA--CTAAG-----AC-C-A------TCC-T----AAGGC-ATGTC---TCAA--TCCTAA-GAC---ACT--GTCtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagaccatcctaaggcatgtctcaatcctaagacactgtcgaaaatcagggtccaggtttaaagaaattagtaatta
gi|4 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaC--ATCC-TAAGGCATG--TCTCAATCCTAAG-ACACTG--TC---G---------AAAAT--CA--GGGTCCA-GGTT---T--------AAAGgaaaatcagggtccaggtttaaagaaattagtaatta
gi|5 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaaacattatcacaacattcgcgataatcttaagatcgttgcttgacgtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagacCAACTAAAAT-AAAA---TCAAAATGAA-TA----TACAAGTATTGT---TTG----------------GTTTTGTTTTACGTAC--ATGTATTCACA-TG--------GA---T---TCTTT-TCTATTAC------TTGCTTGTTTCCATGTGA-TAA---AGACACGCATGA------TTGG--AA-TGTA--------C----ATGTA------CATACTAGT-ATT--G---AAGA--C-A-A-T-A-TAGGCACTGGTTCAAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTATTTAAAAGCAACGAGGAGTAGTTT---T---TTTTTTA--AGTCATGCCACGAAATCCAACATTGCGTGTCCAAGGAGCTGCA--CATATTGCTACATG------AAGTGG---GAA-----------------T--ACTCTT--TTAACCGCTTCACTA------AC-CCGCAAG----TAACG-----------C-AGCTTAAA---------AA--GCTAG-GTATAAACTGT--GTTCACGAATTGA--AACG--CT---GTCAACGATACAAACCATGTTAGGACTGCGGAGGAAATCCG-AAGGAAAAGGACTAC--ATACATGA------ATAGCAAAATAAAGATTATCATAACTTTCGCAACAATCTTAAGACCATCTTAAGACATGTTGC-----TTGACGaaattagtaatta
gi|6 : --GGGGCCT-GGTT---TTCG-----AAAGAATCCTAAG-----AT-TGA------TCC-T----AAGAT-ATA-----------TCTTAG-GAC---AC---GTCTTAGGACAG------TGT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATCA-TCC----TAAtc
gi|6 : cctATGTGAATAA---AGACGGGCATGAATT---TTAA--AAGTGTA--------C----ATGTAGGCCCGTAT--TGTT-ATTTCA---AGGA--C-A-AGT-ATTGGGCAATGGTTCAAAAA---------TAACCTCGCCAAGCATCTATCAGGGCTTTTTCGGACCATCTTTC---GATTCGTTAGTAT--AAAAGCAACGAAAATTAGCTTTTAT---TGAA--A--AGTCATGCCACGGAATCCAAACTT-CACGTCCGAGGAATTGCG--GATATTGCTGCATG------AAGTG-----------------G--A--TT--AC--------A--------ACTA------A---GGCAGC----TAA---------------------AAAGA------AA--GCCTG-AGA--ATCTGTTGGTGGAAAAGTT----AATG--CC---GTCAACGACACAGAtgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|7 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatccta--GGGGATT-GGAT---TTCG-----AAA--AGCCTAG---------------------------AAGAT-ATA-T---T-------TTAG-GAA---AT---GTCTTTGGACAG------TCT-----TAGGGCT--AT-CTTAGGACAATCG-------TAAAT---------CAAAGCTATCTT------TG-T-C----T---------------------TG-TCGTAAGATTA-TC-TGA---TAT----C--------ACACTTTT---TT-----CGC-ATCATTATACGAATAAAAAAAAGTATCATAGCATTA---------------AAATTAAAATTCTTTTGAAATCA-C-TATACATTTAATACA-G-----AGAAAT-GG-G--GGAAA-AT--AA-A-TT---T-T---ATCCT-GG-AAAA------TAACGA-CCATA--T------ATA-CAT--T---TA----------CAAA-----A------AA---A-------T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAA----A--TTA-----------------TG-AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG------AAAATAAT
gi|8 : tT-ATAAA---------TAATCCCGCCAAACATATGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAGGAGTAGTTT---T---TTAC------GTCATGCCATGAAATCCAATCTTGCGTGTCCAATGAGCTGCACAGATATTGCTTCATG------AAGTGG---AAAA---GAAAAAG--TCTTT--GCACTT--T-ACCAGCGTCACTC------ACACCGCAGG----TA-------------------T--AG---------TA--GCTTG-GTA--AACTGT--GTTCATGAAATGA--AATG--CT---GTCAACGACACAGATCATATTAGGACGGTGGAGGAAATCAG-AAGGAAAAGGACCAC--GTACATGA------ATAGGACAAAAAAGATTATCATAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----
gi|9 : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTTC-----TAGATTT---CT-------GGA--TGT-TTAACATTCTAA-AACATGTTACTTGTCGT-TCTC-AGATTGAATTCGATCTATTAAAGACGCAGTCGAATGTCT-----TATAATTTAGACATGTCC-TACGAC--------CA-TCCTAAG-AAA-TG--TCTCAGTCC-----TAAGAC--A
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33 ): CTAAATCATTTAACTTGAAATAAGTAATTAGTTAACACCAAGTGTCTCACAGA
Unaligned ( gi|35 ): TTGACCTTAGGATGATATTATAATTATTAAAATCTTCACTTTTT
Unaligned ( gi|37 ): AGTAAATGTTTATGGAAGATTTTTTTAATCAATATATTTT
Unaligned ( gi|38 ): AAATCACTAATACCACTCCGTTTAAATATCAGAGATAAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 11 22222 1 333333333 222222 22222 333333333333 11 1 55555555555555555555555555555555555555555555555555555555555555555555555 111111 1111111111111111 4444444444444 1111 111111111 1 66666666666666666 5555555555555555555 11111 11 111111 3333333333333333333333 11 111111 111111 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11111 111111 1111111111 111 1111 111 1111 222222222 1111 1 11111 33333 111 3333333333333333 2222222 444444444444444444444444 111111 111111 33333333 1111111 2222222 1111 1 2222222222 55555555555555555555 222 111111 4444444444444444 111111 666666666666666666666666666666666666666666666 1111 111111 11111
lowQualScore : 3333 88 1 22 55555 1 5 888888888 1 1 1 1 1 1 1 1 999999 66666 1 333333333333 88 5 1 8 7 0 44444444444444444444444444444444444444444444444444444444444444444444444 66 4 111111 4 0 4 2 5 6666666666666666 1 66 33 0 2 333 55555 55555 44 666666 2 5555 2 8888888888888 5 444 3333 0 11 888888 77777 33 2 44 333333333 3 3 3 7777 1 22222222222222222 4 0 2 0000000000000000000 777 11111 5 0 5 0 33 0 33 1 5 3 00 3 666666 5 0 6666666666666666666666 4 66 4 5 0 8 4 55 4 4 222222 1 55 66 222222 2 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 5 3 8 4 2 11111 4 4 9999 222222 9999999999 4 4 777 0 6666 1111 5 555 5 2222 666666666 0 5555 0 55555 3 3 22222 777 8888888888888888 2 4 1111111 5 444444444444444444444444 0 444444 777 666666 55 8 55555555 8888 2222222 66 4 9999999 4444 5 5 1 4 4 0 5555555555 5 0 44444444444444444444 888 55 3 0 0 1 111 777 99999 111 4 55 4 2 000000 666 8888 4444444444444444 55 4 0 111111 0 8888 0 222222222222222222222222222222222222222222222 66 3 2222 66 888 1 6 1 1 99 999999 0 1 44 7 2 66666
lowQualScore : .... .. . .. ..... . . ......... . . . . . . . . ...... ..... . ............ .. . . . . . ....................................................................... .. . ...... . . . . . ................ . .. .. . . ... ..... ..... .. ...... . .... . ............. . ... .... . .. ...... ..... .. . .. ......... . . . .... . ................. . . . ................... ... ..... . . . . .. . .. . . . .. . ...... . . ...................... . .. . . . . . .. . . ...... . .. .. ...... . ............................................................................................................................................. . . . . . ..... . . .... ...... .......... . . ... . .... .... . ... . .... ......... . .... . ..... . . ..... ... ................ . . ....... . ........................ . ...... ... ...... .. . ........ .... ....... .. . ....... .... . . . . . . .......... . . .................... ... .. . . . . ... ... ..... ... . .. . . ...... ... .... ................ .. . . ...... . .... . ............................................. .. . .... .. ... . . . . .. ...... . . .. . . .....
lowQualScore : 5555 00 0 00 55555 0 5 000000000 0 0 0 0 0 0 0 0 555555 55555 0 555555555555 00 5 0 8 0 6 00000000000000000000000000000000000000000000000000000000000000000000000 11 4 999999 0 1 4 9 0 4444444444444444 9 99 77 2 0 555 00000 33333 44 444444 4 0000 4 9999999999999 0 444 4444 4 44 222222 11111 99 9 88 333333333 3 3 3 1111 3 99999999999999999 4 9 2 9999999999999999999 888 11111 0 1 2 4 66 7 66 4 7 0 44 4 222222 0 2 0000000000000000000000 4 11 4 0 2 9 4 00 4 4 888888 1 66 11 888888 2 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 6 9 4 2 11111 4 4 4444 888888 4444444444 4 4 777 1 6666 7777 7 777 7 1111 999999999 4 9999 0 88888 2 2 00000 555 0000000000000000 9 8 2222222 0 444444444444444444444444 1 444444 888 888888 55 0 00000000 5555 4444444 11 4 2222222 6666 7 7 7 3 9 0 1111111111 0 1 22222222222222222222 777 55 2 1 1 7 000 000 33333 555 9 00 7 5 555555 444 5555 7777777777777777 55 0 7 555555 9 5555 1 222222222222222222222222222222222222222222222 11 7 4444 99 888 0 7 0 0 22 222222 3 0 77 3 5 77777
consensus : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-ATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATT--T------ATATCAA--T---TATATTT-----CAAA-----A------AA---AAC-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGTT-AT---A---AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TGAA--A--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTCTT--T-AGCCGCCTCACTA------ACACCGCAAC----TAACG-----------C-CGCT--AA---------AA--GCTTG-GGA--AACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
Reference ( family-873 ) : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-ATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATT--T------ATATCAA--T---TATATTT-----CAAA-----A------AA---AAC-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGTT-AT---A---AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TGAA--A--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTCTT--T-AGCCGCCTCACTA------ACACCGCAAC----TAACG-----------C-CGCT--AA---------AA--GCTTG-GGA--AACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|1 : CAAACA----TTTTA--CAAAGTTCATAGATTAATGGGCGTGAACGTCTG-TATC---------TACGTACAATTTGCTCGTCATCCATATAGTCCAATGGGCTGTCCCTATCTCGAAATATTCTATTACGACGGACCTTGTGAGCTTGTCTTTGTAGTAGTAAGTAAACAGCAGCCATATTTGTTTTCG-TGTTTTGTCTTATATTTAGCCTCTAACACGGATCTGTATTAAGATTAT-ATGAAATCTTAT--GACAT-TCTTAAGCCCG---TC---CT----AAGTCAT-GTTG-----CT-----T--------GAT--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TTTCAGTCC-----TAAGAT--AA--GGGTCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-ATA-CATGT--A--TCTTAA-GAC---AC---GTCTTAGGACAG------ACT-----TAGGACT--AT-CTTAGGACAATCGCAAAGTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTATGATTGGTCGTAAAATTAT----CT-------A-----TT---TT-----TAAGATTATGT-A-GGGTGCAAGA--GTATTATAA-ATTAAATTTCAAAACCAAAAAATGAAAATTTCTTTTAAATTA-C-TTAA-GTTTAATAGATA-----AGACAT-GT-ATAAGAAACAT--AG-T-TTGA-T-T--AATTCC-GGGAAAA------TAA-GA-ACATT--T------ATTTCAAACTACGCATATTTTTGGCCAAA-----A------AA---AAC-----TGATAAA----T--AAAAAGAGAAGCCCCCC-CCTCCTCCAAT------T-C------G---AATAAAAATTAG-TTAAATATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--T-------GAAT-TG-AAA-TAAAATAATTATATTAAGACAATTT--G-C-C---TTCACAATGTCAAATTGAG----AAG----A----CAAATA----TAATTTTAACTAAA-T-AAA----TCAAAATGAAATAA---TACAATTATTGT---TTGTCCGT---------TGGTTTTATTT-ACGTA---ATGT-TGAATAATT--------AA---T---T---T-TCTATTAC------TTG-TTGTTTACATGTGAATAA---AGACACGCATGA------TTGGGAAA-TGTA-----A--C----ATGTA------GAT--TGTTGAT---A---AGGA--A-A-AGT-AATGG-CA-TG-TT-AAAAA---------TAATCC----GAACATGTGCC--TGCT------GA-------TC---GATACGTTTGTAT--AAAAGCCACGAAGAGTAGTTT---T---TTAA--A--AGTCATGCCACGAAATTCAATCCTGTGTGTCCAAGGAGCTGCA--GATAT-GCTACATG------AAGTGG---AAAA---GAATAAG--ACTTT--ACTCTT--T-GGCCGCCGCACTA------ACACCGCAAG----TAACA-----------CACAC---------------A--GCTTG-AGA--AACTGT--GCTCACGAATTGA--AATG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGAGGAAATCAG-AAGAAAAAGGACCAC--ATATATGA------ATAGCACAAAAAAGATTATCACAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|10 : GA--TTTTA-AAAAT-GATC-AATTA-----T-T-ACA----TGATACATGTATG--T-------GAGG-TG-AAA-ATAAATAATTTT-TCAAGACATTTC--C-C-CC--TTCACAATATCAA-TTGAG----AAG----T----AAAACAAA--TATTTTCAACTAAAAT---------CAAAATGAA-TA----TACCAATATTGT---TTG----------------GTTTTGTTTTACGTAT--ATGTATGCACA-TC--------AA---T---TCTTT-TCTATTACATGTACTTGCTTGTTCACATGTGAATAA---AGACACGCATGA------TTGG--AA-TGTACATCTA--C----ATGTA------GAT--TGTT-AT---ACT-AGTATTG-A-GGTCAATAGGCACTGGTT---------------CAATCCCATCAAACATTTGTCCGTGCT------GA-------TC---GATACATTT
gi|11 : tgaGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-A-------T--A--TCTTAG-GAC---AC--------------G------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAACAACGTTAG--ACTTAGGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------AAAC--TTTTGTT-----TAC-ATCATTTTTCGAGTGAAATA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCATC-TTTA-GTTTAATACAT------AGAAATGGG-A--AACAA-AT--AA-TATTGATT-T--AATTTC-GG-GAAA------T----A-TCACT--T------ATTTCAA--
gi|12 : -------CCC-CCCCCCCCAATAAAAACT-CCAAGCAA---AAAAAAAATCAGCTTC--AATTGCATGAAATTTTA-AAAA-TGACC-AGATA-----T-T-ATA----TGATA------TG--T-------GGGGTTA-AAA-T-AAACGATTAT-TTAAGACATTTTCCC-C-C---TTCACATTATCAA-TTGAGAAGTAAG----A----CAAATAA---TATTTTCAACTACAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTATCTACATATGTTTGCAGA-TC--------AATTCT---T---T-TCTATTAC------TTTCTTGTTTACATGTGAATAA---AGATACGAATGA------Tactacgaaatatattt
gi|13 : cccGGGCCT-GGTT---TTTG-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-A-------T--A--TCTTAG-GAC---A--------------AG------TC------TAGGACT--AT-CTTACGACAATAGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-TCC----TAA---CATTGA--ACTTAAGATGGTCTTAGGATTG-TCGTAAAATTAT----CAAACTTTTA-----TT---TT-----TAC-ATCGTTTTACGGGTAAAAGA--GTATTATAACATTAAATT--AAA-TTTAAACATA---------TTGAA---------------------ATG-----GGAAA----------CAA-AT--AATT-TTGATT-T--AATTCC-GA-AAAATATATGTAACGA-ATATTTAT------ATATCAG--T-----TATTT-----C----------------A---AAC-----T-ACGAAA--Tatattgttatactagtattgtggacaata
gi|14 : TTGTAT--AAAAGCAACAAAGAGTAGTTTCTGT---TGAA--A--AACCATGCCAGGAAATCCAAAGATACGCGACCGGGGAGGTGAA--GACATCACAACAGG------GTGTGG---AAAA---GAATAAAATA--TT--ACCCTTTAT-AGCCGCCTCAATA------ACTCCCCAACAATATAACAACCCCCCCCCCC-CCCT--CA---------AA---------AA--AAAGGT--G---GGGAATTAA--AACG--CT---GTCTATGATACAGat
gi|15 : aactacccctgcttttccgaaataTGGTATCAATATTG-TCGTAAGATT----------------------T---TTAAAAATAT-ATC--TTTAGGGATGAAAAAA-GTATTATAGCAATCTATTTCAAA-CAAAATAGTGCAAATTATTTTA----C--C-GATA-GTTTCATACAT-------------------------AT--AA-T-TTGA-T-TT-AATTTC-GG-AAAA------TAACGA-ACATT--T------AGATCAA--T-----TATTT-----CAAA-----A------GATG-AAA-----T-ACgattgtcgttagatcagcaaacg
gi|16 : CTT-GGTT---ATCG-----AAAGTATGCTCAG-----AC-TGA------CGC-C----AAGAT-AT--C---------TCTTAGTAAC---A--------------AA------TTT-----TAGGAAT--AT-TGGAGGACAATCAAGAACTGTAAAT---------CTAAGCTGCCTT-ACGATTGTT-C----TGACAAAGCTGACCCTA--GGATGGTCTTAGAATTA-TTGCAAAATTTT----C--------ACT---TT---TT-----TAC-Agt
gi|17 : aGCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGTT-AT---A---
gi|17 : aaTTGTGT--AAAAACAAC-----TTTGTAT---T----GAA--ACAAG-CATGCCATGAAACCCAATCTTCCGTATC-AAGGAGCTGAA--GATATTGCTACACG------AGGTTG---GAAA---GAATAAT--A--Tttaaagacccgccatgaaaaagaaatattgtgtaaaaacaactttgtattgaaacaagcatgccatgaaacccaatcttccgtatcaaggagctgaagatattgctacacgaggttggaaagaataatatctat
gi|18 : aagcatgattggaatgtacatgtacattgttatattaaagacccgccatgaaaaagaaataTGA-CCAATTA-----T-T-ATA----TGATA------TG--T-------GAAG-TA-AAA-----ATAAT---------ACATTTT--C-C-CCCCTTCACAATGTCAA-TTGAG----AAG----A----CAAATAA---TATTTTCAACTAAAATAAAA----TCAAAATG-AAT-A---TACCAATATTGTTTGTTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCActat
gi|19 : aa--GGGGCTT-GGAT---GTTG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-A-------T--G--TCTTAA-GAC---AA---GTGTTGGGACAG------TCT--------GACT--AT-CTTAGGACAATCGTTAATTGTAAATNTTTGTAAACAAATGCGTTTTAAAGACCC-T-C----TAA
gi|2 : AAAA--ATATTATAACATTAATTTTCAAA-CAACAAATTGAAAATTCTTTTGAAATCA-CCGTTA-GTTTTATGCATGCATGTAGAAAT-GG-----GGAA-A----A-T-TAGA-TAT--AGTTTC-AG-AAAA------TAACGA-ACATT--TTGATTTATATCAA--T---GATAT-------CAAA-----ATATGAAAA---AACATT--T-ATAAAAGTTT--AAAAA---------------TCCGTCAAT------T--------------------TCA--------ATTGCATGA--AATAA-AAAAAAGA-C-TATTAATACATGT-ATA----TGATA------TG--T-------GAGG-TG-AAA-ATAAATGATTAT-TTAAGACATTTT--T-CAC---TCCACAATGCCAG-TTGAG----AAGTACGA----CAAACAA---TATTTTCAACTAAAAT-AAACATATTAAAAT-AAATA----TGCCAATTTTGT---TTGC---T---------AAAAATTGCTT---------A-GTATGCACA-TC--------TA---T---T---TCTCT-CTA-----------TTGTTTA----------A---AGACGCACATGA------TTGA--AAATGCAC----A--CGTTCATGTA------TAT--TGTT-AT---ATCAAGGA--T-A-TGT-AATGGGCAATGGTT-AAAAAA--------GAAGCCCACTAAACATTTACCCGTGCTTTTCCGGAATATATATC---GATACGAT-GTAT--AAAA----------TTATTTTATAT---TGAA--A--ACTCGTGTCACTAAATCCAAACGTGCGTGCCCGATGAGCTGCG--GATATTGCTACACG------AGGTGG---AAAT---GAATAAG--A--CTTGAATCTT--T-AACCGCCTCACTA------ACATTGCAAC----TAACG-----------C-CGCT--GA---------AAAGGATTG-GGA--AACATT----TCACGAATCAA--AACG--CT---GTCAACGGTGCAGACCATGTTAGGACGGTAGACGAAATCAG-GAAGAAATGGACCAT--ATACATGATTACATGTAACACAAAAAAGAT---CAAAATTTTC-TGGCAA----------ATCTTAA-ATACGTTGC-----TTGACGacactaataaaaataa
gi|2 : AAAATTTTCT--GGCAAATCTTAA----------------------ATAC-GTTG-----CT-----T--------GAC--GTCCTTAAGAT-TGAGTCTTA-TCTTTGG-ACtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatc--GTCT-TAGGAC-CGAAACTCG-CCTTAGG-ATG--G--TCTTGGACCATACTCAAGTC--AT--TGGACAT-G-TT---TTCG-----ATTGAGTTCTAAGTTAGTAT-CCG------TCC-A----AAGATAAGA-C---TCAA--TCTTAA-GG----AC---GTCggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttCT-GGTT---TTCG-----AAAGTGTCTTAGG-----AC-CGA---------------A-------A-C---T-------------------C---GCCTTAGGATGG------TCT-----T-GGACC--ATACTCAAGTCAactttcgaaaaccagcctggggctctta
gi|20 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttgacgtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaaTATCCTAAG-----AT-CGA------CCC-T----AAGAT-ACA-----T--A--T--TGG-GAC---AA---ATTGTAGGACAG------TAT-----TAGGACT--AT-CTTAGGACAATCATAAATTGTACAT---------CCAAAATGTCTT-AAAATTG-T-C----CAAG--CAT--G--ATT--GGAcctggggctctta
gi|20 : GCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGTT-AT---A---atgtacatgtacattgttatattaaagac
gi|21 : tatcctaagatcgaccctaagatacatattgggacaaattgtaggacagtattaggactatcttaggacaatcataaattgtacatccaaaatgtcttaaaattgtccaa--GGGACTT-GGTT---TTCA-----AACGTATCCTAAG-----AC-TGA------CCC-T----AAGAT-AT-----------------G-GAC---AA---GTCTAAGAGCAA------TCT-----TAATACT--AT-CTT---------------TGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----T--------------TT--AAAAGGTTTTAGGATTG-TCGTAAGATTTT----C--------A-----TT---TT---------ATTATTTttaaagac
gi|22 : GGATTG-TCGTTAGATCAG----C--------AAACG-TT---TT-----TAC-ATCATTTTATGGGTGAAAGA--GTATTATAAAATTAATATTCAAG-CCAAAAAACAAGTATTCTTTTGAAATCACC-GTTA-GTTCAAAACAT------AAAAAT-GGAA--AACAA-AT--AA-
gi|23 : --GGGGCCT-GGTT---TTCA-----AAAGTATCCTAAG-----TT-TGA------TCC-T----AAGAT-ATA-----------TCTTAG-GAC---AA---GTCTTAGGACAG------TCC-----TAGGATT--AT-CTTACGACAATCGCAAATTGTAAAT---------CAACTGTGTCTT-AAGATTG-TCC----TAAC--
gi|24 : tTGC---T---------TAGTTTATTTTTA-------ACGTATACACA-TC--------CC---TCCCT---T-CCTATTGC------GTGCTTGTGTACATGTGAATAA---AGACGCGCACGACTAGTTCTGG--AA-TGT------A--C----ATGCA------
gi|25 : agcAACATACGTGTCTGAGGAGCTGCG--GCTATCGCTACATA------AAGTAG---AAAA---AAAT---------------CTT--T-AGCCGCCTCACTA------ATACAACAAC----TAACG-----------C-CGCT--AA---------AA---C----------ACTGT--GCTGACtgt
gi|26 : ---T---TGAA--A--CATCATGCCACGAAATCAAAA--TACGTGTCTGAGGAGCTGCG--GCTATCGCTATATG------AAGTAG---AAAC---AAA---------------TCTT--T-AGCCGCCTTACTA------ATACTACAAC----
gi|27 : ta--AT-CTTAGGACAATCGTAAATTGTAAAT---------CAGAGAT-TCTT-AAGATTG-T-CCTAGTAAC-------G--A--------AGTCCTATGATTG-TCGTAAGATCATCACAC--------A-----TT---TT-----T
gi|28 : A-----A------AA---AAT--------CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAAA------TTA--TG----------------AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-gt
gi|29 : CT-GGTT---TTCG-----AAAGTCTCTTGTG-----AC-TGAAACATGTCT-T----TGGAT-G----------A--TCTTTG-GAC---AT---GT-TTA----AG------TCA-----TAAGACa
gi|29 : catAT--GTCC-AAAGA--------TCA-TCCAAAG-ACA-TG--TTTCAGTC----------AC--AA--GAGAC------T---TTCG-----AAAc
gi|3 : catgtcttatgacttaaacAAAGAATTAAAATTCTTTTGAATTCA-CAGTTA-GAATAATACAC------AGAAAT-GG-G---GAAA-ATTTGA-T-TTAA-T-TC-AATTTC-GG-AAAA------TAACAA-TCATT--T------AT-TCAA--T-----TATTT-----CAAAAGATGA------AA---AACATT--T-ACAAGA--TT--GAaccagc
gi|3 : ataTTCAAT------TTC------GGAAAATAACAATCA--TT---TATTCAATTA--TTTCA-AAAGATGA-A-AAACA-----T-TTACAAGATTGATT------TGACCAATTATAGAGG-TGCAAA-TAAA----------TAAA----TTT--C-C-C---TTC-TAATATCAA-CTGAG----ACGTA--A----GAAAGAGATTTTTTTTCAACTAAAAT-AAA----TAAAATTGAAATGAATATACCAATATTGT---GTGT---TAATAACTGCTAGTGTT-TTTTA---AC--AT--ATGCACA-TCTAGCCCTTAA---T---T---T--CTATGAC------TTGCTTGTTTACATATGAA-----------------A------TTAG--AA-TGCA--------C----ATGTA------TAT--TGTT-AT---ATGAAGGA--ACA-AGT-AATGGGCAATGGTT-AAAAAATAAGCGCATAAGCCCGCCAAACATTCATCCATGCT------TT-------TCTCGAATA----TGTAT--AAAAACAACGAACATTAGTTT---TCATTAAA--A--AGTCATGCCACGAAATCCAAACTTTCGTGCCCGAGGAGCTGCG--GGTATTACTACATGTACATGAAGTGGTCCAAAA---GAAT-----------------T--T-AGCCGCCTCACTACATGTAACACCGCAAC----TGATG-----------C-AGCT--AACAAAAAAAAAA--GCTTGCGGA--AACTGT--GCTCACGAATTAATTCACAGTCTAGAGTCAACGATAAAGACCATGATAACACGGTGAACGAAATCAG-AAAGAAATGGGCCAC--ATACATGA------GTAGCATGCAAAAGATTATCATAA----------AA---TAAGACCATCCTAAGACATGTTGCTAAAATTGACGtttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataagaccatcctaagacatgttgctaaaattgacgtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaaAAGATTATCATAAAAT-----------------AAGACCA---TC---CT----AAGACAT-GTTG-----CTAAAATT--------GAC--GTCC-TAAGAT-TGAATCTTA-TTTTTAG-A-A-CGAATCTAA--CC-----TAGGAtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaGTTTTA---CTGAGGACA-TG--CATAAGTCA-----TCAGACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATA-----AG-----ATTCAA------TCT-T----AGGAC-GT--C---A--A--TTTTAGCAAC---AT---GTCTTAGGATGG------TCT-----------T--AT-TTTATGATAATCttcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaaAAAT--AA--GGACCCA-GGTT---TTCG-----AAAGTGTACGAGG-----AT--GG------TTT-TACTGAGGAC-ATG-CA--T--AAGTCATCA-GACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATAAGATTCAAT-CTTAGGAC-GTC---AATTTTAG-----------C-AACATGTCTT-AGGATGG-T-C----Tcatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|30 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataAA-AT--TA-T-TTAA-T-CTCAATTCC-TG-AAAA------TAACGACACATT--T------ATATCAA------TA-GTTT-----CAAA-----A------AG---Aatataattggagatta
gi|31 : aGACCA---TT---CT----AACAAAT-GCTG-----CT-----T--------GGC--ATCC-TAAGAT-TGAATCTTA-TCtgaaaacat
gi|32 : gattaacaccacaatatatc--GGGGCTT-GGTT---TTCA-----AAAGTGTTCTAAG-----AT-CTA------TCCTT----AAGAC-A
gi|34 : ctctCCTGCCAAACATTTATCCGTGCT------TT-------TCCGGGATG---TTGTAT--AAAAGCAACagtttta
gi|36 : g--GGGGTCT-G-TT---TTCG-----AAAGTATTCTAA------AT-TGA------TC
gi|39 : tggaagcctA--AGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----
gi|4 : -T-T--AATTCCCAG-AAAA-------AAAAA-GCATT--T------ATATCAT--T---TAT-TTC-----CAAA-----A------GACGAAATGCATTT-ACAAAA--TTGTAAAAAAA-------------------AAT------C-C----------AATAA----CT--TCA---ATTGCATGA--GATTATAAAATTGA-C-CA-----------------------A------TG--C-------AAGG-TA-AAAATAAAATA-TTAT-TTAAGACATTTT--TTC-C---TTCACAATGTCAA-T-GAG----AAG----AAAGGCAAACAA---TATTTTCAACTGAAAT-AAA-----CGATATTAAATAAATATACCAGTAGTGT---TT-----------------------TTTAAAATA---ATATATGCACA-CC---------------------------TTAC------TTGCTTGTTTACGTGTGAATAATAAAGACGAGCATGA------TTGA--AA-TGCA-----AGTC----ATGTA------CAT---GT--------------A--C-ATAGT-TATAT-CAA--GTT-AAAG----------TAA--------AACATTTAGCCAT-------------------------TA-----GTAT--AAGA-CAACGAAGATTAGTTT---T---TG--------------CCACGAAATCCA-TCTTATGTGTCCGAGGAGCTGCG--GATATTGCTACACA------AAGTGG---AAAAAAAGAATAAG--ACTTT--ACTCTT--T-AGCCGCCTCACTA------ACACTACAAC----TAACG-----------T-CGTT--AA---------A----------------CTAT--GCTCACGAATT------CG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCAACAAG--AATGGACCACATATACATGA------A---CACAAAAAACATTATCACAACATTCGCGATAATCTTAAGATC------------GTTGC-----TTGACG
gi|4 : AACATTATCACAACATTC-GC--GATAA-TCTTAAGATCG---T--------------------TG-----CT-----T--------GAC--GTCC-TAAGAT-TTAATCTTA-TCATGGG---A-TG------AATCC-----TAA-------------CTT-------------------AGCA--CTAAG-----AC-C-A------TCC-T----AAGGC-ATGTC---TCAA--TCCTAA-GAC---ACT--GTCtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagaccatcctaaggcatgtctcaatcctaagacactgtcgaaaatcagggtccaggtttaaagaaattagtaatta
gi|4 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaC--ATCC-TAAGGCATG--TCTCAATCCTAAG-ACACTG--TC---G---------AAAAT--CA--GGGTCCA-GGTT---T--------AAAGgaaaatcagggtccaggtttaaagaaattagtaatta
gi|5 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaaacattatcacaacattcgcgataatcttaagatcgttgcttgacgtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagacCAACTAAAAT-AAAA---TCAAAATGAA-TA----TACAAGTATTGT---TTG----------------GTTTTGTTTTACGTAC--ATGTATTCACA-TG--------GA---T---TCTTT-TCTATTAC------TTGCTTGTTTCCATGTGA-TAA---AGACACGCATGA------TTGG--AA-TGTA--------C----ATGTA------CATACTAGT-ATT--G---AAGA--C-A-A-T-A-TAGGCACTGGTTCAAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTATTTAAAAGCAACGAGGAGTAGTTT---T---TTTTTTA--AGTCATGCCACGAAATCCAACATTGCGTGTCCAAGGAGCTGCA--CATATTGCTACATG------AAGTGG---GAA-----------------T--ACTCTT--TTAACCGCTTCACTA------AC-CCGCAAG----TAACG-----------C-AGCTTAAA---------AA--GCTAG-GTATAAACTGT--GTTCACGAATTGA--AACG--CT---GTCAACGATACAAACCATGTTAGGACTGCGGAGGAAATCCG-AAGGAAAAGGACTAC--ATACATGA------ATAGCAAAATAAAGATTATCATAACTTTCGCAACAATCTTAAGACCATCTTAAGACATGTTGC-----TTGACGaaattagtaatta
gi|6 : --GGGGCCT-GGTT---TTCG-----AAAGAATCCTAAG-----AT-TGA------TCC-T----AAGAT-ATA-----------TCTTAG-GAC---AC---GTCTTAGGACAG------TGT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATCA-TCC----TAAtc
gi|6 : cctATGTGAATAA---AGACGGGCATGAATT---TTAA--AAGTGTA--------C----ATGTAGGCCCGTAT--TGTT-ATTTCA---AGGA--C-A-AGT-ATTGGGCAATGGTTCAAAAA---------TAACCTCGCCAAGCATCTATCAGGGCTTTTTCGGACCATCTTTC---GATTCGTTAGTAT--AAAAGCAACGAAAATTAGCTTTTAT---TGAA--A--AGTCATGCCACGGAATCCAAACTT-CACGTCCGAGGAATTGCG--GATATTGCTGCATG------AAGTG-----------------G--A--TT--AC--------A--------ACTA------A---GGCAGC----TAA---------------------AAAGA------AA--GCCTG-AGA--ATCTGTTGGTGGAAAAGTT----AATG--CC---GTCAACGACACAGAtgtgaataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|7 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatccta--GGGGATT-GGAT---TTCG-----AAA--AGCCTAG---------------------------AAGAT-ATA-T---T-------TTAG-GAA---AT---GTCTTTGGACAG------TCT-----TAGGGCT--AT-CTTAGGACAATCG-------TAAAT---------CAAAGCTATCTT------TG-T-C----T---------------------TG-TCGTAAGATTA-TC-TGA---TAT----C--------ACACTTTT---TT-----CGC-ATCATTATACGAATAAAAAAAAGTATCATAGCATTA---------------AAATTAAAATTCTTTTGAAATCA-C-TATACATTTAATACA-G-----AGAAAT-GG-G--GGAAA-AT--AA-A-TT---T-T---ATCCT-GG-AAAA------TAACGA-CCATA--T------ATA-CAT--T---TA----------CAAA-----A------AA---A-------T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAA----A--TTA-----------------TG-AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG------AAAATAAT
gi|8 : tT-ATAAA---------TAATCCCGCCAAACATATGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAGGAGTAGTTT---T---TTAC------GTCATGCCATGAAATCCAATCTTGCGTGTCCAATGAGCTGCACAGATATTGCTTCATG------AAGTGG---AAAA---GAAAAAG--TCTTT--GCACTT--T-ACCAGCGTCACTC------ACACCGCAGG----TA-------------------T--AG---------TA--GCTTG-GTA--AACTGT--GTTCATGAAATGA--AATG--CT---GTCAACGACACAGATCATATTAGGACGGTGGAGGAAATCAG-AAGGAAAAGGACCAC--GTACATGA------ATAGGACAAAAAAGATTATCATAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----
gi|9 : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTTC-----TAGATTT---CT-------GGA--TGT-TTAACATTCTAA-AACATGTTACTTGTCGT-TCTC-AGATTGAATTCGATCTATTAAAGACGCAGTCGAATGTCT-----TATAATTTAGACATGTCC-TACGAC--------CA-TCCTAAG-AAA-TG--TCTCAGTCC-----TAAGAC--A
blockSeqs : ATGC AC T AA A A A CTTTGTTGA A A A T A T A T GA . G CT . . G C T GTTACTTGTCGTTCTCAGATTGAATTCGATCTATTAAAGACGCAGTCGAATGTCTTATAATTTA AT T TTGAG A G C C TCTTGGACCATACT G TG TT A AGA TTCTA TTAGT TC AACATG T ACTG A TGCATAAG T TGA TTGA AC ATTCGT AAAAA CA A CA NTTTGTAAA A T C CTAG A CAACGTTAGACTTAG . A CAAACTTTTA TTG AAAAA . C AA AA T . C A ATCTT C GCATGTAGAAATGGGG . TT T A T A TC C . TATATG C CA TA TGATTT T TTATTTCCAAAAGACGAAATGCATTTACAAAATTGTAAAAAAAAATCCAATAACTTCAATTGCATGAGA T T T C T ATACA G T AGAT CATGTA ACCAATTATA T C ATA TTT CCC A CCC . AAGT TACGA GATT A CATAT A A GAATA TTG TTAATAACTGCTA G T TCTACAT . TAGCCCTTAATTT ATGTAC TAA CTAGTT . A CATCTA GTTC GGCCCGT AC . ATCA TTG T C A G C C AATAAGCGCA T TTTCCGGAATATATATC CAT TT G G CTG CAT ACA AGA A CA C G TACATG TCC AAAA TAAAATATTACC TA T CATGTA AATA CAGCTAACAAAAAAAAAAGCTTGCGGA TG C AATT GT AGA C C G T AT TTACAT T GC T G TAAAA
blockSeqs : C C C AAGACCATCCTAAGACATGTTGCTAAAATT . . CCGAA . . T . AATCTAACC G . . . . . . T . . . . TGTCTCAA C . CT AT . . . . CA . . . C . A CAAAGCTGACCCTAG . A CACACTT . . . C A AA T . T A ACCGT . AGAAATGGGAAAC . . . . T . T . . . C T . . A TGATATCAAAATATGAAAAAACATTTATAAAAGTTTAAAAATCCGTCAATTTCAATTGCATGAAA . A C . A . . . . . T . . AT TAT TT . C . . AAAGG AA A AT A A AAATA TTG TTTG G T CGTAT . AATTCTTTT . . ATT . G AGT . G . . ATGA AC . . A G A C AA G TTTTCGGACCATCTTTC CGA . A T ATA . TTA TCT C . T C . . A TAAGACTTGAAT . . . . ACCCCCCCCCCCCCCTCAAAAA . C AA . . C . G T . . C GC T G .
blockSeqs : C A . TTTCTGGCAAATCTTAAATACGTTGCTT . . TTGAA . . C . CATAAGTCA G . . . . . . T . . . . GACTCAA . . C AC . . . . AG . . . C . G CATTGAACTTAA . T CAAACG . . . G . TA T . A A ACCGT . AAAAATGGAAAAC . . . . . . C . . . C A . . A TTACAAAAAAATCAAACAAAAAAATCCACCACTTTCAGTTGCATAAAATTA . T . . T . . . . . T . . AT TAT C . . . . TAA A . T A A A . TTTG G T CGTAC . AATTCTTTT . . . . . CA . C . . TTCA T . . A G A . A G TTTCTCG CGT . A T TTA . A ACG G . T C . . A TAAGACTTTACT . . . . CAGCTTAAAAAGCTAGGTATA . C AA . . C . G T . . C GT T G .
blockSeqs : TCGCGATAATCTTAAGATCGTTGCTT . . TTGAA . . C . TCTCAGTCC A . . . . . . T . . . . CATA . . A GC . . . . TT . . . C . A GCATGATTG . T CACACA . . . T . AT T . A T ACAGT . GAGAAATGGGGGA . . . . . . . . . . C A . . A . A . . T . . . . . T . . TA TAT C . . . . T A . T A A A . CTAA G T CGTAC . CCTCCCTTC . . . . . A . T . . ACT C . . A G A . A T TTTCCGG CGT . G T . . A ACA A . C T . . T AAAGTCTTTGCA . . . . CCGCTGAAAAGGATTGGGA . T GA . . G . G A . . C T . . .
blockSeqs : . . TTTAA . . C . TTTCAGTC A . . . . . . C . . . . TCAA . . C AC . . . . TA . . . . . A TTA . A CAAAC . . . C . AT . . C A ACTA . AGAAATGGGGA . . . . . . . . . . C A . . A . T . . T . . . . . T . . T . T . . . . A A . T A A A . CTTA T T AATA . GATTCTTTT . . . . . . . C . . TG C . . T G C . A C GATC CGT . G T . . A ACT A . C T . . A GATTAC . . . . AAAGAAAGCCTGAGA . T GA . . G . . A . . . . . . .
blockSeqs : . . CATG . . A . AATCC G . . . . . . C . . . . TATT . . C AT . . . . CA . . . . . A CGA . A CACT . . . . . . . . . CGA . GGGAAAC . . . . . . . . . . A T . . A . T . . A . . . . . C . . A . C . . . . A A . . . . A . . G A AC . TATTTCT . . . . . . . T . . A C . . . . A . . T GATC . . G G . . A TCT T . T T . . C TACT . . . . TAGTAGCTTGGTA . T . . .
blockSeqs : . . C . . . . TCG . . . . . . . C . . . . ACT . . A TT . . . . TA . . . . . A . . A CA . . . . . . . . . . . . . . . . . C G . . A . . . . T . . . . . C . . . . . . . A . . . T . . . . . . . . . . C . . A . . . GATC . . G T . . A CAT A . T C . . A T . . . . CCGCTAAAAC . . . . .
blockSeqs : . . . . . . . . . . . . C . . . . TA . . A AC . . . . CA . . . . . A . . . . . . . . . . . . . . . C . . . . . . . . . . . C . . . . . . . . . . . . C . . . . . . . G . . . ACT G . T T . . A T . . . . TCGTTAAA . .
blockSeqs : . . . . . . T . . . . TA . . A AC . . . . . . . . . . . . . . . . . . . . . TCT G . T T . . . T . . . .
blockSeqs : . . . . . T . . . . TC . . T . . . . . . . . . . . . . A . . T T . . .
blockSeqs : . . . . . T . . . . TG . . T . . . . . . . . . . .
blockSeqs : . . . . . C . . . . TA . . C . . . . .
blockSeqs : . . . . . T . . . . TA . . T . . . . .
blockSeqs : . . . . . C . . . . T . . .
blockSeqs : . . . . T . . . . A . . .
blockSeqs : . . . . . . . . .
blockSeqs : . . . . . .
blockSeqs : . . . .
blockSeqs : . . .
blockSeqCons : TA*********** CACGATTG********* CAAC*************** ACCGT* AGAAATGGGGAA********** TAT* A*** A**** TTTG************ TAC**** AATTCTTTT*************** ** ******** A****** CCGCTAAAAAAGCTGGGA***************************
originalCons : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-ATA-C---T--A--TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAAC--CGTTGG--ATT--GGATGGTCTTAGGATTG-TCGTAAGATTAT----C--------A-----TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCA-C-GTTA-GTTTAATACATG-----AGAAAT-GG-A--AGNAA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATT--T------ATATCAA--T---TATATTT-----CAAA-----A------AA---AAC-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATAA---TACCAATATTGT---TTGT---T---------TGGTTTTGTTTTACGTAC--ATGTATGCACA-TC--------AA---T---T---T-TCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA-----A--C----ATGTA------CAT--TGTT-AT---A---AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TGAA--A--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTCTT--T-AGCCGCCTCACTA------ACACCGCAAC----TAACG-----------C-CGCT--AA---------AA--GCTTG-GGA--AACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
finalCons : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-T----AAGAT-ATA-----------TCTTAG-GAC---AC---GTCTTAGGACAG------TCT-----TAGGACT--AT-CTTAGGACAATCGCAAATTGTAAAT---------CAAAGATGTCTT-AAGATTG-T-C----TAACACGATTG---------GATGGTCTTAGGATTG-TCGTAAGATTATCAAC---------------TT---TT-----TAC-ATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCACCGT-TA-GTTTAATACATAGAAATGGGGAA----------AA-AT--AA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATT--T------ATATCAA--T---TATATTT-----CAAA-----A------AA---AAC-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGG-TG-AAA-TAAAATAATTAT-TTAAGACATTTT--C-C-C---TTCACAATGTCAA-TTGAG----AAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCAAAATGAAATA----TACCAATATTGT---TTGTTTG------------GTTTTGTTTTATAC----ATGTATGCACA-TCAATTCTTTT---------------CTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TGTA--------C----ATGTA------CAT--TGTT-ATA------AGGA--N-A-AGT-AATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTAT--AAAAGCAACGAAGATTAGTTT---T---TGAA--A--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTCTT--T-AGCCGCCTCACTA------ACACCGCAAC----TAACGCCGCTAAAAAAGCTGGGA---------------------------AACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33 ): CTAAATCATTTAACTTGAAATAAGTAATTAGTTAACACCAAGTGTCTCACAGA
Unaligned ( gi|35 ): TTGACCTTAGGATGATATTATAATTATTAAAATCTTCACTTTTT
Unaligned ( gi|37 ): AGTAAATGTTTATGGAAGATTTTTTTAATCAATATATTTT
Unaligned ( gi|38 ): AAATCACTAATACCACTCCGTTTAAATATCAGAGATAAA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 11 22222 1 333333333 222222 22222 333333333333 11 1 55555555555555555555555555555555555555555555555555555555555555555555555 111111 1111111111111111 222222222222222222 111111111 777777777777777777777777777777777777777 33333333333 11111111 11 11111111 1 11 111111 111111 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 11111 111111 1111111111 111 222 333333333 1111 2222 1111 111111 3333333333333 444444444444 11111111111 111111 111111 222222222 111111 1111111 33333333333333333333333 1 2222222222 55555555555555555555 222 111111 4444444444444444 111111 666666666666666666666666666666666666666666666 1111 111111 11111
lowQualScore : 3333 88 1 22 55555 1 5 888888888 1 1 1 1 1 1 1 1 999999 66666 1 333333333333 88 5 1 8 7 0 44444444444444444444444444444444444444444444444444444444444444444444444 66 4 111111 4 0 4 2 5 6666666666666666 1 66 33 0 2 333 55555 55555 44 666666 2 444444444444444444 5 99 0 4444 9999999 2 33 66 333333333 555 3 3 000000000000000000000000000000000000000 4 2 1 55 44444444444 777 44444444 0 5 0 33 0 33 1 5 3 00 1 4 0 5 0 88888888 888 00 8 66 666 0 3 4 00 4 4 222222 1 55 66 222222 2 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 5 4 4 8 2 11111 4 4 9999 222222 9999999999 4 4 111 3 0 6666 5 5 333 5 999999999 0 5555 5 0000 0000 2 111111 5 888 0000000000000 2 222222222222 5 00000000000 444444 777 666666 55 7 555555555 3 000000 1111111 55 4 4 22222222222222222222222 0 1 3 0 5555555555 5 0 44444444444444444444 888 55 3 0 0 1 66 111 777 55 111 4 55 4 2 000000 666 8888 4444444444444444 4 55 0 111111 0 8888 222222222222222222222222222222222222222222222 66 0 2222 66 888 1 6 1 1 99 999999 0 1 44 7 2 66666
lowQualScore : .... .. . .. ..... . . ......... . . . . . . . . ...... ..... . ............ .. . . . . . ....................................................................... .. . ...... . . . . . ................ . .. .. . . ... ..... ..... .. ...... . .................. . .. . .... ....... . .. .. ......... ... . . ....................................... . . . .. ........... ... ........ . . . .. . .. . . . .. . . . . . ........ ... .. . .. ... . . . .. . . ...... . .. .. ...... . ............................................................................................................................................. . . . . . ..... . . .... ...... .......... . . ... . . .... . . ... . ......... . .... . .... .... . ...... . ... ............. . ............ . ........... ...... ... ...... .. . ......... . ...... ....... .. . . ....................... . . . . .......... . . .................... ... .. . . . . .. ... ... .. ... . .. . . ...... ... .... ................ . .. . ...... . .... ............................................. .. . .... .. ... . . . . .. ...... . . .. . . .....
lowQualScore : 5555 00 0 00 55555 0 5 000000000 0 0 0 0 0 0 0 0 555555 55555 0 555555555555 00 5 0 8 0 6 00000000000000000000000000000000000000000000000000000000000000000000000 11 4 999999 0 1 4 9 0 4444444444444444 9 99 77 2 0 555 00000 33333 44 444444 4 000000000000000000 0 00 4 4444 3333333 9 99 99 333333333 888 3 3 555555555555555555555555555555555555555 0 3 1 55 55555555555 000 00000000 1 2 4 66 7 66 4 7 0 44 4 5 4 0 2 44444444 888 55 9 22 777 2 3 4 66 4 4 888888 1 66 11 888888 2 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 8 4 9 2 11111 4 4 4444 888888 4444444444 4 4 666 2 1 6666 7 7 666 7 000000000 4 9999 0 6666 6666 5 000000 0 888 0000000000000 2 444444444444 0 66666666666 444444 888 888888 00 3 000000000 6 555555 9999999 55 0 0 00000000000000000000000 2 4 1 0 1111111111 0 1 22222222222222222222 777 55 2 1 1 7 11 000 000 55 555 9 00 7 5 555555 444 5555 5555555555555555 0 55 7 555555 9 5555 000000000000000000000000000000000000000000000 11 9 4444 99 888 0 7 0 0 22 222222 3 0 77 3 5 77777
consensus : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-TAAGATA----T------A------TCTTAG-GACAC-GTCTTAGGACAGTCTTAGGACT-------AT-CTTAGG--ACAATCGCAAATTGTAAAT---------CAAAGAT---GTCTT-AAGATTG-TCC-----T-AA-C-A----C----G----A---TT--GGATGGTCTTAGGATTG-TCGTAAGATTAT--C-A-A-C-----TT---TT-----T--ACATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCACCGTTA-GTTTAATACAT------A-GAAATG---GGGAA-AA-ATAA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATT--T------ATATCAA--T---TATATTT-----CAAA-----A------AA---AAC-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGGT-G-AAA-TAAAATAATTAT-TTAAGACATTTTC-C-CC--TTCACAATGTCAA-TTGAGAAGTA--A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCA----AAATGAAAT----A-TACCAATATTGT---TTGT---T------TGGTTTTGTTT-TA--T----A-ATGTATGCACA-TC-AATTCTT---TTCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TG---------TA-CA------TGTA------CAT--TGTT-A-T---A---AGGA--N-AAGT-A--ATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTA--TAAAAGCAACGAAGATTAG--TTT---T---TGAAA--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTC-TT--TAGCCGCCTCACTA------ACACCGCAAC----TAACG-----------CCGCT---AA-------AAAAG-CT-G-GG---AAACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
Reference ( family-873 ) : CAAACAATGCTTTTAACCAAANTNNATAGATTAATGGGCGTGAACGTNTGATATCCTTTGTTGATACGTACAATTTGNCCGTCGTCCATATAGTCCAATGGGCTGTCCCTGTCTCGGAATATTCTATTACGACGGACNTNGTNAGCTCGTCTTNGCAGTNGNANGTAAACAGCAGCCATATTTGTTTTCGATGTTCTGTCTTANATTTAGCCTCTAACACGGATCTGTATTAANATTATCATAAAATTTTAC--GACAN-TCTTAAGACCG---TC---CT----AAGACAC-GTTG-----CT-----T--------GAC--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TCTCAGTCC-----TAAGAC--AA--GGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----AT-CGA------TCC-TAAGATA----T------A------TCTTAG-GACAC-GTCTTAGGACAGTCTTAGGACT-------AT-CTTAGG--ACAATCGCAAATTGTAAAT---------CAAAGAT---GTCTT-AAGATTG-T-C-----T-AA-C-A----C----G----A---TT--GGATGGTCTTAGGATTG-TCGTAAGATTAT--C-A-A-C-----TT---TT-----T--ACATCATTTTACGGGTGAAAGA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCACCGTTA-GTTTAATACAT------A-GAAATG---GGGAA-AA-ATAA-T-TTGA-T-T--AATTCC-GG-AAAA------TAACGA-ACATT--T------ATATCAA--T---TATATTT-----CAAA-----A------AA---AAC-----T-ACAAAA--TT--AAAAAAA-------CCC-CCNCCTTCAAT------T-C------G---AATAAAAATCA--TTA--TATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGGT-G-AAA-TAAAATAATTAT-TTAAGACATTTTC-C-C---TTCACAATGTCAA-TTGAGAAG----A----CAAACAA---TATTTTCAACTAAAAT-AAA----TCA----AAATGAAAT----A-TACCAATATTGT---TTGT---T------TGGTTTTGTTT-TA--T----ACATGTATGCACA-TC-AATTCTT---TTCTATTAC------TTGCTTGTTTACATGTGAATAA---AGACGCGCATGA------TTGG--AA-TG---------TA-CA------TGTA------CAT--TGTT-A-T---A---AGGA--N-AAGT-A--ATGGGCAATGGTT-AAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTA--TAAAAGCAACGAAGATTAG--TTT---T---TGAAA--AGTCATGCCACGAAATCCAANCTTGCGTGTCCGAGGAGCTGCG--GATATCGCTACACG------AAGTGG---AAAA---GAATAAG--A--TT--ACTC-TT--TAGCCGCCTCACTA------ACACCGCAAC----TAACG-----------CCGCT---AA-------AAAAG-CT-G-GG---AAACTGT--GCTCACGAATTGA--AACG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGANGAAATCAG-AAGGAAANGGACCAC--ATACATGA------ATAGCACAAAAAAGATTATCATAACTTTCGCGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|1 : CAAACA----TTTTA--CAAAGTTCATAGATTAATGGGCGTGAACGTCTG-TATC---------TACGTACAATTTGCTCGTCATCCATATAGTCCAATGGGCTGTCCCTATCTCGAAATATTCTATTACGACGGACCTTGTGAGCTTGTCTTTGTAGTAGTAAGTAAACAGCAGCCATATTTGTTTTCG-TGTTTTGTCTTATATTTAGCCTCTAACACGGATCTGTATTAAGATTAT-ATGAAATCTTAT--GACAT-TCTTAAGCCCG---TC---CT----AAGTCAT-GTTG-----CT-----T--------GAT--GTCC-TAAGAC-TGAGTCTTA-TCCTAAG-ACA-TG--TTTCAGTCC-----TAAGAT--AA--GGGTCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TT-TGA------TCC-TAAGATA----T------ACATGTATCTTAA-GACAC-GTCTTAGGACAGACTTAGGACT-------AT-CTTAGG--ACAATCGCAAAGTGTAAAT---------CAAAGAT---GTCTT-AAGATTG-T-C-----T-AA-C------C----GTTGGA---TT--GGATGGTCTTATGATTGGTCGTAAAATTAT--C-T-A-T-----TT---TT-----A--AGATTATGT-A-GGGTGCAAGA--GTATTATAA-ATTAAATTTCAAAACCAAAAAATGAAAATTTCTTTTAAATTAC--TTAAGTTTAATAGAT------AAGACATGTATAAGAA-AC-ATAG-T-TTGA-T-T--AATTCC-GGGAAAA------TAA-GA-ACATT--T------ATTTCAAACTACGCATATTTTTGGCCAAA-----A------AA---AAC-----TGATAAA----T--AAAAAGAGAAGCCCCCC-CCTCCTCCAAT------T-C------G---AATAAAAATTAG-TTAAATATTGCATGA--TTTTA-AAAATTGA-C-AATTA-----T-T-ATA----TGATA------TG--T-------GAATT-G-AAA-TAAAATAATTATATTAAGACAATTTG-C-C---TTCACAATGTCAAATTGAGAAG----A----CAAATA----TAATTTTAACTAAA-T-AAA----TCA----AAATGAAAT----AATACAATTATTGT---TTGTCCGT------TGGTTTTATTTACG--T----A-ATGT-TGAATAATT-AATT------TTCTATTAC------TTG-TTGTTTACATGTGAATAA---AGACACGCATGA------TTGGGAAA-TG---------TAACA------TGTA------GAT--TGTTGA-T---A---AGGA--A-AAGT-A--ATGG-CA-TG-TT-AAAAA---------TAATCC----GAACATGTGCC--TGCT------GA-------TC---GATACGTTTGTA--TAAAAGCCACGAAGAGTAG--TTT---T---TTAAA--AGTCATGCCACGAAATTCAATCCTGTGTGTCCAAGGAGCTGCA--GATAT-GCTACATG------AAGTGG---AAAA---GAATAAG--ACTTT--ACTC-TT--TGGCCGCCGCACTA------ACACCGCAAG----TAACA-----------C--------A-------CACAG-CTTG-AG---AAACTGT--GCTCACGAATTGA--AATG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGAGGAAATCAG-AAGAAAAAGGACCAC--ATATATGA------ATAGCACAAAAAAGATTATCACAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----TTGACG
gi|10 : GA--TTTTA-AAAAT-GATC-AATTA-----T-T-ACA----TGATACATGTATG--T-------GAGGT-G-AAA-ATAAATAATTTT-TCAAGACATTTCC-C-CC--TTCACAATATCAA-TTGAGAAG----T----AAAACAAA--TATTTTCAACTAAAAT---------CA----AAATGAA-T----A-TACCAATATTGT---TTG-------------GTTTTGTTT-TACGT----ATATGTATGCACA-TC-AATTCTT---TTCTATTACATGTACTTGCTTGTTCACATGTGAATAA---AGACACGCATGA------TTGG--AA-TGTACATC---TA-CA------TGTA------GAT--TGTT-A-T---ACT-AGTATTG-AGGTCA--ATAGGCACTGGTT---------------CAATCCCATCAAACATTTGTCCGTGCT------GA-------TC---GATACATTT
gi|11 : tgaGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----TT-TGA------TCC-TAAGATA----T------A------TCTTAG-GACAC------------GTCTTAGGACT-------AT-CTTAGG--ACAATCGCAAATTGTAAAT---------CAAAGAT---GTCTT-AAGATTG-TCC-----T-AA-CAA----CGTTAG----A---CTTAGGATGGTCTTAGGATTG-TCGTAAGATTAT--CAA-A-C-----TTTTGTT-----T--ACATCATTTTTCGAGTGAAATA--GTATTATAACATTAAATTTCAAA-CCAAAAAATGAAAATTCTTTTGAAATCATCTTTA-GTTTAATACAT------A-GAAATG---GGAAACAA-ATAA-TATTGATT-T--AATTTC-GG-GAAA------T----A-TCACT--T------ATTTCAA--
gi|12 : -------CCC-CCCCCCCCAATAAAAACT-CCAAGCAA---AAAAAAAATCAGCTTC--AATTGCATGAAATTTTA-AAAAT-GA-CCAGATA-----T-T-ATA----TGATA------TG--T-------GGGGTTA-AAA-TAAA-CGATTAT-TTAAGACATTTTC-C-CCC-TTCACATTATCAA-TTGAGAAGTAAGA----CAAATAA---TATTTTCAACTACAAT-AAAA---TCA----AAATGAA-T----A-TACCAATATTGT---TTGT---TGTT---TGGTTTTGTTT-TA--TCTACATATGTTTGCAGA-TC-AATTCTT---TTCTATTAC------TTTCTTGTTTACATGTGAATAA---AGATACGAATGA------T---------------------------------A------TAT--TGTT-A-T----------A--C-TAGT-ATTGTGGACAATactacgaaatatattt
gi|13 : cccGGGCCT-GGTT---TTTG-----AAAGTATCCTAAG-----TT-TGA------TCC-TAAGATA----T------A------TCTTAG-GACA------------AGTC-TAGGACT-------AT-CTTACG--ACAATAGCAAATTGTAAAT---------CAAAGAT---GTCTT-AAGATTG-TCC-----T-AA-C-AT---T----G----AAC-TTA-AGATGGTCTTAGGATTG-TCGTAAAATTAT--CAA-A-CTTTTATT---TT-----T--ACATCGTTTTACGGGTAAAAGA--GTATTATAACATTAAATT--AAA-TTTAAACATA---------TTGAAAT----G---------------------G-GAAAC-------AA-A---TAATT-TTGATT-T--AATTCC-GA-AAAATATATGTAACGA-ATATTTAT------ATATCAG--T-----TATTT-----C----------------A---AAC-----T-ACGAAA--Ta
gi|14 : TTGTA--TAAAAGCAACAAAGAGTAG--TTTCTGT---TGAAA--AACCATGCCAGGAAATCCAAAGATACGCGACCGGGGAGGTGAA--GACATCACAACAGG------GTGTGG---AAAA---GAATAAAATA--TT--ACCC-TTTATAGCCGCCTCAATA------ACTCCCCAACAATATAACAACCCCCCCCCCCCCCTCAAAA-------AAAAG-GT-G-GG------------------GAATTAA--AACG--CT---GTCTATGATACAGat
gi|15 : aactacccctgcttttccgaaataTGGTATCAATATTG-TCGTAAGATT-----------------T---TTAAAAAT--ATATC--TTTAGGGATGAAAAAA-GTATTATAGCAATCTATTTCAAA-CAAAATAGTGCAAATTATTTT------ACCGATA-GTTTCATACAT--------------------------ATAA-T-TTGATT-T--AATTTC-GG-AAAA------TAACGA-ACATT--T------AGATCAA--T-----TATTT-----CAAA-----A------GATG-AAA-----T-ACgattgtcgttagatcagcaaacg
gi|16 : CTT-GGTT---ATCG-----AAAGTATGCTCAG-----AC-TGA------CGC-CAAGATA----T------C------TCTTAGTAACA------------AATTTTAGGAAT-------AT-TGGAGG--ACAATCAAGAACTGTAAAT---------CTAAGCT---GCCTT-ACGATTGTT-C-----T-GA-C-AAAGCT----G----ACCCTA--GGATGGTCTTAGAATTA-TTGCAAAATTTT--C-A-C-T-----TT---TT-----T--ACAgt
gi|17 : aGCATGA------TTGG--AA-TG---------TA-CA------TGTA------CAT--TGTT-A-T---A---
gi|17 : aaTTGTG--TAAAAACAAC-----TTTG--TAT---T----GAAACAAG-CATGCCATGAAACCCAATCTTCCGTATC-AAGGAGCTGAA--GATATTGCTACACG------AGGTTG---GAAA---GAATAAT--A--Tttaaagacccgccatgaaaaagaaatattgtgtaaaaacaactttgtattgaaacaagcatgccatgaaacccaatcttccgtatcaaggagctgaagatattgctacacgaggttggaaagaataatatctat
gi|18 : aagcatgattggaatgtacatgtacattgttatattaaagacccgccatgaaaaagaaataTGA-CCAATTA-----T-T-ATA----TGATA------TG--T-------GAAGT-A-AAA-----ATAAT---------ACATTTTC-C-CCCCTTCACAATGTCAA-TTGAGAAG----A----CAAATAA---TATTTTCAACTAAAATAAAA----TCA----AAATG-AAT----A-TACCAATATTGTTTGTTGT---T------TGGTTTTGTTT-TACGT----ACATGTATGCActat
gi|19 : aa--GGGGCTT-GGAT---GTTG-----AAAGTATCCTAAG-----AT-CGA------TCC-TAAGATA----T------G------TCTTAA-GACAA-GTGTTGGGACAGTCT---GACT-------AT-CTTAGG--ACAATCGTTAATTGTAAATNTTTGTAAACAAATGC---GTTTTAAAGACCC-T-C-----TAAA-C-A----C----
gi|2 : AAAA--ATATTATAACATTAATTTTCAAA-CAACAAATTGAAAATTCTTTTGAAATCACCGTTA-GTTTTATGCATGCATGTA-GAAATG---GGGAA-AA-TTA------GA-TAT--AGTTTC-AG-AAAA------TAACGA-ACATT--TTGATTTATATCAA--T---GATAT-------CAAA-----ATATGAAAA---AACATT--T-ATAAAAGTTT--AAAAA---------------TCCGTCAAT------T--------------------TCA--------ATTGCATGA--AATAA-AAAAAAGA-C-TATTAATACATGT-ATA----TGATA------TG--T-------GAGGT-G-AAA-ATAAATGATTAT-TTAAGACATTTTT-CAC---TCCACAATGCCAG-TTGAGAAGTACGA----CAAACAA---TATTTTCAACTAAAAT-AAACATATTA----AAAT-AAAT----A-TGCCAATTTTGT---TTGC---T------AAAAATTGCTT------------A-GTATGCACA-TC-TATTTCT---CTCTATT--------------GTTTA----------A---AGACGCACATGA------TTGA--AAATG---------CA-CACGTTCATGTA------TAT--TGTT-A-T---ATCAAGGA--T-ATGT-A--ATGGGCAATGGTT-AAAAAA--------GAAGCCCACTAAACATTTACCCGTGCTTTTCCGGAATATATATC---GATACGAT-GTA--TAAAA----------TTAT--TTTATAT---TGAAA--ACTCGTGTCACTAAATCCAAACGTGCGTGCCCGATGAGCTGCG--GATATTGCTACACG------AGGTGG---AAAT---GAATAAG--A--CTTGAATC-TT--TAACCGCCTCACTA------ACATTGCAAC----TAACG-----------CCGCT---GA-------AAAGGATT-G-GG---AAACATT----TCACGAATCAA--AACG--CT---GTCAACGGTGCAGACCATGTTAGGACGGTAGACGAAATCAG-GAAGAAATGGACCAT--ATACATGATTACATGTAACACAAAAAAGAT---CAAAATTTTC-TGGCAA----------ATCTTAA-ATACGTTGC-----TTGACGtaataaaaataa
gi|2 : AAAATTTTCT--GGCAAATCTTAA----------------------ATAC-GTTG-----CT-----T--------GAC--GTCCTTAAGAT-TGAGTCTTA-TCTTTGG-ACtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatc--GTCT-TAGGAC-CGAAACTCG-CCTTAGG-ATG--G--TCTTGGACCATACTCAAGTC--AT--TGGACAT-G-TT---TTCG-----ATTGAGTTCTAAGTTAGTAT-CCG------TCC-AAAGATAAGACTCA----A------TCTTAA-GG-AC-GTCggatactaacttagaactcaatcgaaaacatgtccaatgacttgagtatggtccaagaccatcctaaggcgagtttcggtcctaagacactttcgaaaaccagcctggggctctta
gi|2 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttCT-GGTT---TTCG-----AAAGTGTCTTAGG-----AC-CGA-----------AA-----------------------CT--------C-GCCTTAGGATGGTCTT-GGACC-------ATACTCAAG--TCAactttcgaaaaccagcctggggctctta
gi|20 : aaaaatattataacattaattttcaaacaacaaattgaaaattcttttgaaatcaccgttagttttatgcatgcatgtagaaatggggaaaattagatatagtttcagaaaataacgaacattttgatttatatcaatgatatcaaaatatgaaaaaacatttataaaagtttaaaaatccgtcaatttcaattgcatgaaataaaaaaaagactattaatacatgtatatgatatgtgaggtgaaaataaatgattatttaagacatttttcactccacaatgccagttgagaagtacgacaaacaatattttcaactaaaataaacatattaaaataaatatgccaattttgtttgctaaaaattgcttagtatgcacatctatttctctctattgtttaaagacgcacatgattgaaaatgcacacgttcatgtatattgttatatcaaggatatgtaatgggcaatggttaaaaaagaagcccactaaacatttacccgtgcttttccggaatatatatcgatacgatgtataaaattattttatattgaaaactcgtgtcactaaatccaaacgtgcgtgcccgatgagctgcggatattgctacacgaggtggaaatgaataagacttgaatctttaaccgcctcactaacattgcaactaacgccgctgaaaaggattgggaaacatttcacgaatcaaaacgctgtcaacggtgcagaccatgttaggacggtagacgaaatcaggaagaaatggaccatatacatgattacatgtaacacaaaaaagatcaaaattttctggcaaatcttaaatacgttgcttgacgtccttaagattgagtcttatctttggacggatactaacttagaactcaatcgaaaacatgtccaaTATCCTAAG-----AT-CGA------CCC-TAAGATA----C------A------TATTGG-GACAA-ATTGTAGGACAGTATTAGGACT-------AT-CTTAGG--ACAATCATAAATTGTACAT---------CCAAAAT---GTCTT-AAAATTG-T-C-----C-AAGC-A----T----G----A---TT--GGAcctggggctctta
gi|20 : GCATGA------TTGG--AA-TG---------TA-CA------TGTA------CAT--TGTT-A-T---A---atgtacatgtacattgttatattaaagac
gi|21 : tatcctaagatcgaccctaagatacatattgggacaaattgtaggacagtattaggactatcttaggacaatcataaattgtacatccaaaatgtcttaaaattgtccaa--GGGACTT-GGTT---TTCA-----AACGTATCCTAAG-----AC-TGA------CCC-TAAGATA----T------------------G-GACAA-GTCTAAGAGCAATCTTAATACT-------AT-CTT-----------------TGTAAAT---------CAAAGAT---GTCTT-AAGATTG-T-C-----T-------------------------TT--AAAAGGTTTTAGGATTG-TCGTAAGATTTT--C-A---------TT---TT----------ATTATTTttaaagac
gi|22 : GGATTG-TCGTTAGATCAG--C-A-AACG----TT---TT-----T--ACATCATTTTATGGGTGAAAGA--GTATTATAAAATTAATATTCAAG-CCAAAAAACAAGTATTCTTTTGAAATCACCGTTA-GTTCAAAACAT------A-AAAATG---GAAAACAA-ATAA-
gi|23 : --GGGGCCT-GGTT---TTCA-----AAAGTATCCTAAG-----TT-TGA------TCC-TAAGATA----T------A------TCTTAG-GACAA-GTCTTAGGACAGTCCTAGGATT-------AT-CTTACG--ACAATCGCAAATTGTAAAT---------CAACTGT---GTCTT-AAGATTG-TCC-----T-AA-C-
gi|24 : tTGC---T------TAGTTTATTTT-TA---------ACGTATACACA-TC-CCTCCCT---TCCTATTGC------GTGCTTGTGTACATGTGAATAA---AGACGCGCACGACTAGTTCTGG--AA-TG---------TA-CA------TGCA------
gi|25 : agcAACATACGTGTCTGAGGAGCTGCG--GCTATCGCTACATA------AAGTAG---AAAA---AAA---------------TC-TT--TAGCCGCCTCACTA------ATACAACAAC----TAACG-----------CCGCT---AA-------AA----C-----------ACTGT--GCTGACtgt
gi|26 : ---T---TGAAA--CATCATGCCACGAAATCAAAA--TACGTGTCTGAGGAGCTGCG--GCTATCGCTATATG------AAGTAG---AAAC---AAA---------------TC-TT--TAGCCGCCTTACTA------ATACTACAAC----
gi|27 : ta-------AT-CTTAGG--ACAATCGTAAATTGTAAAT---------CAGAGAT----TCTT-AAGATTG-TCC-----T-AG-TAA----C----G----A-----------AGTCCTATGATTG-TCGTAAGATCAT--C-ACA-CA----TT---TT-----T--
gi|28 : A-----A------AA---AAT--------CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAAA------TTA--TG----------------AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGGT-G-AAA-gt
gi|29 : CT-GGTT---TTCG-----AAAGTCTCTTGTG-----AC-TGAAACATGTCT-TTGGATG-----------A------TCTTTG-GACAT-GT-TTA----AGTCATAAGACa
gi|29 : catAT--GTCC-AAAGA--------TCA-TCCAAAG-ACA-TG--TTTCAGTC----------AC--AA--GAGAC------T---TTCG-----AAAc
gi|3 : catgtcttatgacttaaacAAAGAATTAAAATTCTTTTGAATTCACAGTTA-GAATAATACAC------A-GAAATG---GGGAA-AATTTGA-T-TTAA-T-TC-AATTTC-GG-AAAA------TAACAA-TCATT--T------AT-TCAA--T-----TATTT-----CAAAAGATGA------AA---AACATT--T-ACAAGA--TT--GAaccagc
gi|3 : ataTTCAAT------TTC------GGAAAATAACAATCA--TT---TATTCAATTA--TTTCA-AAAGATGA-A-AAACA-----T-TTACAAGATTGATT------TGACCAATTATAGAGGT-GCAAA-TAAA----------TAAA----TTTC-C-C---TTC-TAATATCAA-CTGAGACGTA--A----GAAAGAGATTTTTTTTCAACTAAAAT-AAA----TAA----AATTGAAATGAATA-TACCAATATTGT---GTGT---TAATAACTGCTAGTGTTT-TT--T----A-ACATATGCACA-TCTAGCCCTTAATTTCTATGAC------TTGCTTGTTTACATATGAA-----------------A------TTAG--AA-TG---------CA-CA------TGTA------TAT--TGTT-A-T---ATGAAGGA--ACAAGT-A--ATGGGCAATGGTT-AAAAAATAAGCGCATAAGCCCGCCAAACATTCATCCATGCT------TT-------TCTCGAATA----TGTA--TAAAAACAACGAACATTAG--TTT---TCATTAAAA--AGTCATGCCACGAAATCCAAACTTTCGTGCCCGAGGAGCTGCG--GGTATTACTACATGTACATGAAGTGGTCCAAAA---GAAT------------------T--TAGCCGCCTCACTACATGTAACACCGCAAC----TGATG-----------CAGCT---AACAAAAAAAAAAG-CTTGCGG---AAACTGT--GCTCACGAATTAATTCACAGTCTAGAGTCAACGATAAAGACCATGATAACACGGTGAACGAAATCAG-AAAGAAATGGGCCAC--ATACATGA------GTAGCATGCAAAAGATTATCATAA----------AA---TAAGACCATCCTAAGACATGTTGCTAAAATTGACGtttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaagattatcataaaataagaccatcctaagacatgttgctaaaattgacgtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaaAAAT--AA--GGACCCA-GGTT---TTCG-----AAAGTGTACGAGG-----AT--GG------TTT-TA------------------------CTGAG-GACAT-G-CATA----AGTCATCAGACTGAATTGAAT-CCTAGGTTAGATTCG----TTCTAAAA---------ATAAGATTCAATCTT-AGGA-CG-T-CAATTTT-AG-C-A----A----C----A---T--------GTCTTAGGATGG-TCTT-ATTTTATGAT-A-A-T-----CT---TT-----T--GCATtcctaagattgaatcttatttttagaacgaatctaacctaggattcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcAAGATTATCATAAAAT-----------------AAGACCA---TC---CT----AAGACAT-GTTG-----CTAAAATT--------GAC--GTCC-TAAGAT-TGAATCTTA-TTTTTAG-A-A-CGAATCTAA--CC-----TAGGAatataattggagatta
gi|3 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaGTTTTA---CTGAGGACA-TG--CATAAGTCA-----TCAGACTGAATTGAATCCTAGGTTAGATTCGTTCTAAAAATA-----AG-----ATTCAA------TCT-TAGGACG----TCA----A------TTTTAGCAACAT-GTCTTAGGATGGTCT------T-------AT-TTTATG--ATAATCttcaattcagtctgatgacttatgcatgtcctcagtaaaaccatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|30 : ataaaagaattaaaattcttttgaattcacagttagaataatacacagaaatggggaaaatttgatttaattcaatttcggaaaataacaatcatttattcaattatttcaaaagatgaaaaacatttacaagattgatttgaccaattatagaggtgcaaataaataaatttcccttctaatatcaactgagacgtaagaaagagattttttttcaactaaaataaataaaattgaaatgaatataccaatattgtgtgttaataactgctagtgttttttaacatatgcacatctagcccttaatttctatgacttgcttgtttacatatgaaattagaatgcacatgtatattgttatatgaaggaacaagtaatgggcaatggttaaaaaataagcgcataagcccgccaaacattcatccatgcttttctcgaatatgtataaaaacaacgaacattagttttcattaaaaagtcatgccacgaaatccaaactttcgtgcccgaggagctgcgggtattactacatgtacatgaagtggtccaaaagaatttagccgcctcactacatgtaacaccgcaactgatgcagctaacaaaaaaaaaagcttgcggaaactgtgctcacgaattaattcacagtctagagtcaacgataaagaccatgataacacggtgaacgaaatcagaaagaaatgggccacatacatgagtagcatgcaaaaA-AA-ATTA-T-TTAA-T-CTCAATTCC-TG-AAAA------TAACGACACATT--T------ATATCAA------TA-GTTT-----CAAA-----A------AG---Acatcctcgtacactttcgaaaacctgggtccttatttatataattggagatta
gi|31 : GACCA---TT---CT----AACAAAT-GCTG-----CT-----T--------GGC--ATCC-TAAGAT-TGAATCTTA-TCtgaaaacat
gi|32 : gattaacaccacaatatatc--GGGGCTT-GGTT---TTCA-----AAAGTGTTCTAAG-----AT-CTA------TCCTTAAGACA----A------G------TTTTA
gi|34 : ctctCCTGCCAAACATTTATCCGTGCT------TT-------TCCGGGATG---TTGTA--TAAAAGCAAC
gi|36 : g--GGGGTCT-G-TT---TTCG-----AAAGTATTCTAA------AT-TGA------TC
gi|39 : tggaagcctA--AGGGCCT-GGTT---TTCG-----AAAGTATCCTAAG-----
gi|4 : -T-T--AATTCCCAG-AAAA-------AAAAA-GCATT--T------ATATCAT--T---TAT-TTC-----CAAA-----A------GACGAAATGCATTT-ACAAAA--TTGTAAAAAAA-------------------AAT------C-C----------AATAA----CT--TCA---ATTGCATGA--GATTATAAAATTGA-C-CA-----------------------A------TG--C-------AAGGT-A-AAAATAAAATA-TTAT-TTAAGACATTTTTTC-C---TTCACAATGTCAA-T-GAGAAG----AAAGGCAAACAA---TATTTTCAACTGAAAT-AAA----CGATATTAAAT-AAAT----A-TACCAGTAGTGT---TT-T---T------TAAA---------A--T----A-ATATATGCACA-CC----------------TTAC------TTGCTTGTTTACGTGTGAATAATAAAGACGAGCATGA------TTGA--AA-TGCAAGTCATGTA-CA------TGTA------CAT--AGTT-A-T---A--------------------T---CAA--GTT-AAAG----------TAA--------AACATTTAGCCAT-------------------------TA-----GTA--TAAGA-CAACGAAGATTAG--TTT---T---TG------------CCACGAAATCCA-TCTTATGTGTCCGAGGAGCTGCG--GATATTGCTACACA------AAGTGG---AAAAAAAGAATAAG--ACTTT--ACTC-TT--TAGCCGCCTCACTA------ACACTACAAC----TAACG-----------TCGTT---AA-------A------------------CTAT--GCTCACGAATT------CG--CT---GTCAACGATACAGACCATGTTAGGACGGTGGACGAAATCAACAAG--AATGGACCACATATACATGA------A---CACAAAAAACATTATCACAACATTCGCGATAATCTTAAGATC------------GTTGC-----TTGACG
gi|4 : AACATTATCACAACATTC-GC--GATAA-TCTTAAGATCG---T--------------------TG-----CT-----T--------GAC--GTCC-TAAGAT-TTAATCTTA-TCATGGG---A-TG------AATCC-----TAA-------------CTT-------------------AGCA--CTAAG-----AC-C-A------TCC-TAAGGCA----TGTCTCAA------TCCTAA-GACACTGTCtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagaccatcctaaggcatgtctcaatcctaagacactgtcgaaaatcagggtccaggtttaaagaaattagtaatta
gi|4 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaC--ATCC-TAAGGCATG--TCTCAATCCTAAG-ACACTG--TC---G---------AAAAT--CA--GGGTCCA-GGTT---T--------AAAGgaaaatcagggtccaggtttaaagaaattagtaatta
gi|5 : ttaattcccagaaaaaaaaagcatttatatcatttatttccaaaagacgaaatgcatttacaaaattgtaaaaaaaaatccaataacttcaattgcatgagattataaaattgaccaatgcaaggtaaaaataaaatattatttaagacattttttccttcacaatgtcaatgagaagaaaggcaaacaatattttcaactgaaataaacgatattaaataaatataccagtagtgttttttaaaataatatatgcacaccttacttgcttgtttacgtgtgaataataaagacgagcatgattgaaatgcaagtcatgtacatgtacatagttatatcaagttaaagtaaaacatttagccattagtataagacaacgaagattagtttttgccacgaaatccatcttatgtgtccgaggagctgcggatattgctacacaaagtggaaaaaaagaataagactttactctttagccgcctcactaacactacaactaacgtcgttaaactatgctcacgaattcgctgtcaacgatacagaccatgttaggacggtggacgaaatcaacaagaatggaccacatatacatgaacacaaaaaacattatcacaacattcgcgataatcttaagatcgttgcttgacgtcctaagatttaatcttatcatgggatgaatcctaacttagcactaagacCAACTAAAAT-AAAA---TCA----AAATGAA-T----A-TACAAGTATTGT---TTG-------------GTTTTGTTT-TACGT----ACATGTATTCACA-TG-GATTCTT---TTCTATTAC------TTGCTTGTTTCCATGTG-ATAA---AGACACGCATGA------TTGG--AA-TG---------TA-CA------TGTA------CATACTAGT-ATT---G---AAGA--C-AA-T----ATAGGCACTGGTTCAAAAA---------TAATCCCGCCAAACATTTGTCCGTGCT------GA-------TC---GATACGTTTGTATTTAAAAGCAACGAGGAGTAGTTTTT---T---TTTTA--AGTCATGCCACGAAATCCAACATTGCGTGTCCAAGGAGCTGCA--CATATTGCTACATG------AAGTGG---GAA-----------------T--ACTCTTT--TAACCGCTTCACTA------AC-CCGCAAG----TAACG-----------CAGCT---TA-------AAAAG-CT-A-GGTATAAACTGT--GTTCACGAATTGA--AACG--CT---GTCAACGATACAAACCATGTTAGGACTGCGGAGGAAATCCG-AAGGAAAAGGACTAC--ATACATGA------ATAGCAAAATAAAGATTATCATAACTTTCGCAACAATCTTAAGACCATCTTAAGACATGTTGC-----TTGACGaaattagtaatta
gi|6 : --GGGGCCT-GGTT---TTCG-----AAAGAATCCTAAG-----AT-TGA------TCC-TAAGATA----T------A------TCTTAG-GACAC-GTCTTAGGACAGTGTTAGGACT-------AT-CTTAGG--ACAATCGCAAATTGTAAAT---------CAAAGAT---GTCTT-AAGATCA-TCC-----T-AA-T-G----T----G----A---tc
gi|6 : cctATGTGAATAA---AGACGGGCATGAATT---TTAA--AAGTG---------TA-CA------TGTAGGCCCGTAT--TGTT-A-TTTCA---AGGA--C-AAGT-A--TTGGGCAATGGTTCAAAAA---------TAACCTCGCCAAGCATCTATCAGGGCTTTTTCGGACCATCTTTC---GATTCGTTAGTA--TAAAAGCAACGAAAATTAG--CTTTTAT---TGAAA--AGTCATGCCACGGAATCCAAACTT-CACGTCCGAGGAATTGCG--GATATTGCTGCATG------AAGTG-----------------G--A--TT--AC--------A--------ACTA------A---GGCAGC----TAAA--------------------AA-------GAAAGCCT-G-AG---AATCTGTTGGTGGAAAAGTT----AATG--CC---GTCAACGACACAGAataaagacgggcatgaattttaaaagtgtacatgtaggcccgtattgttatttcaaggacaagtattgggcaatggttcaaaaataacctcgccaagcatctatcagggctttttcggaccatctttcgattcgttagtataaaagcaacgaaaattagcttttattgaaaagtcatgccacggaatccaaacttcacgtccgaggaattgcggatattgctgcatgaagtggattacaactaaggcagctaaaaagaaagcctgagaatctgttggtggaaaagttaatgccgtcaacgacacaga
gi|7 : cctggggcctggttttcgaaagaatcctaagattgatcctaagatatatcttaggacacgtcttaggacagtgttaggactatcttaggacaatcgcaaattgtaaatcaaagatgtcttaagatcatccta--GGGGATT-GGAT---TTCG-----AAA--AGCCTAG-----------------------AAGATA----T------A------TTTTAG-GAAAT-GTCTTTGGACAGTCTTAGGGCT-------AT-CTTAGG--ACAATCG-------TAAAT---------CAAAGCT---ATCTT------TG-T-C-----T--------------------------------TG-TCGTAAGATTA-TC-TGA---TAT--C-ACA-C-----TT---TT-----TTCGCATCATTATACGAATAAAAAAAAGTATCATAGCATTA---------------AAATTAAAATTCTTTTGAAATCACTATAC-ATTTAATACAG------A-GAAATG---GGGGA-AA-ATAA-A-TT---T-T---ATCCT-GG-AAAA------TAACGA-CCATA--T------ATA-CAT--T---TA----------CAAA-----A------AA---A-------T--CAAA----C--AAAAAAA-------TCCACCACTTTCAGT------T--------G---CATAAA----A--TTA-----------------TG-AAAATTAA-C-AATTA-----T-T-ATA----TGATA------TG--C-------GAGGT-G------AAAATAAT
gi|8 : tT-ATAAA---------TAATCCCGCCAAACATATGTCCGTGCT------GA-------TC---GATACGTTTGTA--TAAAAGCAACGAGGAGTAG--TTT---T---TTAC----GTCATGCCATGAAATCCAATCTTGCGTGTCCAATGAGCTGCACAGATATTGCTTCATG------AAGTGG---AAAA---GAAAAAG--TCTTT--GCAC-TT--TACCAGCGTCACTC------ACACCGCAGG----TATAG-----------TAGCT-------------------T-G-GT---AAACTGT--GTTCATGAAATGA--AATG--CT---GTCAACGACACAGATCATATTAGGACGGTGGAGGAAATCAG-AAGGAAAAGGACCAC--GTACATGA------ATAGGACAAAAAAGATTATCATAACTTTCGTGACAATCTTAAGACCATCCTAAGACATGTTGC-----
gi|9 : CAAACAATGCTTTTAACCAAATTAAATAAATTAA----AATGAATATATGATATTCTTTGTTGATACGTACAATTTGACCGTCGTCCATATAGTCCAATAAGTTGTCCCTGTCTCAGAATATTCTATTACGACGAACATAATTAGCTCATCTTAGCAGTTGAATGTAAATAACAGTCATATTTGT----GATGTTC-----TAGATTT---CT-------GGA--TGT-TTAACATTCTAA-AACATGTTACTTGTCGT-TCTC-AGATTGAATTCGATCTATTAAAGACGCAGTCGAATGTCT-----TATAATTTAGACATGTCC-TACGAC--------CA-TCCTAAG-AAA-TG--TCTCAGTCC-----TAAGAC--A
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|33 ): CTAAATCATTTAACTTGAAATAAGTAATTAGTTAACACCAAGTGTCTCACAGA
Unaligned ( gi|35 ): TTGACCTTAGGATGATATTATAATTATTAAAATCTTCACTTTTT
Unaligned ( gi|37 ): AGTAAATGTTTATGGAAGATTTTTTTAATCAATATATTTT
Unaligned ( gi|38 ): AAATCACTAATACCACTCCGTTTAAATATCAGAGATAAA