lowQualScore : 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 3 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 111 1 55555555555 1 11 1 222222 55555555555 1 3333333333333333 11 1 22 1 1 2222222 33333 11111 77777777777777777777777 33333 111 2 88888888888888888888888888888888888888888888888888888888888888888888888 11 11 333333333333 1 44 1 2 1 33333333333 111111 444 2 22 77777 111 11 3333 3 44444 22 222222222 33 1 44444444444444 1 222 11 3333 1 2222 2222222 222222 33333333333333333 111 22222 111 1111 11 11 22222 11111 2 11 11 33333333 111 222222 222222222222222222 333333333333333333 11 22222222222222 333 111 1111 22 11111 333333333333333 111 333 2222 1111 1 1111 222222 1 3333333 1111 22222222222222222222 1111111111 1111111111 5555555555555555555555555555 11111111111111111111111111111111111111111 1
lowQualScore : 5 5 7 3 3 7 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 000 1 5 00000000000 7 44 7 1 0 5 222222 5 8 5 66666666666 0 5 55 1 6666666666666666 99 1 2 6 55 6 6 6666666 11111 66666 6 44444444444444444444444 99 99 44444 111 6 0 8 9 8 33333333333333333333333333333333333333333333333333333333333333333333333 8 8 88 11 0 333333333333 8 8 8 0 0 8 8 0 00 8 8 6 8 4 6 55555555555 777777 8 88 3 111 8 4 8 6 44 44 0 3 66666 777 66 2222 8 2 3 00000 3 8 0 11 11 888888888 0 00 0 6 33333333333333 0 2 2 000 77 3333 8 0 6 6666 0 0 66 11 1111111 3 88 0 3 8 333333 88 55555555555555555 111 5 6 11111 888 8 7777 1 99 11 33333 8 8 44444 6 3 8 0 8 0 11 8 0 11 0 8 33333333 111 99 555555 999999999999999999 5 888888888888888888 5 8 33 55555555555555 5 5 000 3 6 6 99 111 0000 6 0 99 55 5 77 33333 000000000000000 5 5 1 9999 5 222 5 66 5 66 222 7777 5 5 5 7777 5 5 5 1 66 5 4 66 66 66 3 1111 55 3 55 555555 3 0 88 3 55 55 9999999 3 0000 3 44 3 44 99999999999999999999 0000000000 7777777777 3 5555555555555555555555555555 3 5 3 88888888888888888888888888888888888888888 2 2 2 33 33 2 5 5 1 3 33
lowQualScore : . . . . . . .................................................................................................. ... . . ........... . .. . . . . ...... . . . ........... . . .. . ................ .. . . . .. . . ....... ..... ..... . ....................... .. .. ..... ... . . . . . ....................................................................... . . .. .. . ............ . . . . . . . . .. . . . . . . ........... ...... . .. . ... . . . . .. .. . . ..... ... .. .... . . . ..... . . . .. .. ......... . .. . . .............. . . . ... .. .... . . . .... . . .. .. ....... . .. . . . ...... .. ................. ... . . ..... ... . .... . .. .. ..... . . ..... . . . . . . .. . . .. . . ........ ... .. ...... .................. . .................. . . .. .............. . . ... . . . .. ... .... . . .. .. . .. ..... ............... . . . .... . ... . .. . .. ... .... . . . .... . . . . .. . . .. .. .. . .... .. . .. ...... . . .. . .. .. ....... . .... . .. . .. .................... .......... .......... . ............................ . . . ......................................... . . . .. .. . . . . . ..
lowQualScore : 0 0 0 3 3 3 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 222 4 0 11111111111 1 44 1 6 1 7 000000 7 4 7 00000000000 7 7 66 4 8888888888888888 00 3 2 7 00 0 0 0000000 22222 77777 7 33333333333333333333333 22 22 22222 777 7 0 0 6 0 66666666666666666666666666666666666666666666666666666666666666666666666 0 0 66 00 8 000000000000 0 0 0 8 8 0 0 6 00 0 0 0 0 0 0 22222222222 000000 0 88 8 000 0 0 0 0 66 88 8 8 00000 555 00 0000 0 0 0 00000 0 0 8 66 22 222222222 8 88 8 0 00000000000000 0 5 5 888 00 8888 0 8 0 0000 8 8 44 66 4444444 8 88 8 2 0 000000 88 00000000000000000 888 7 7 55555 333 0 0000 4 00 00 88888 0 0 88888 0 2 0 6 0 4 44 0 8 00 8 0 00000000 777 22 888888 999999999999999999 7 444444444444444444 7 6 66 33333333333333 7 7 777 7 7 7 22 777 3333 7 8 22 00 7 99 44444 777777777777777 7 7 4 4444 7 444 0 99 0 99 555 6666 0 0 0 4444 7 7 7 4 99 0 4 11 11 11 6 4444 00 6 00 999999 6 9 66 6 00 00 7777777 6 5555 3 66 3 66 88888888888888888888 8888888888 9999999999 3 3333333333333333333333333333 3 7 3 88888888888888888888888888888888888888888 9 9 9 99 99 9 7 7 0 1 66
consensus : NNNNNNNNNNNNNNNNNTAGTAATTTATGAATGATCAGTTGATGGAAT-TGACAGAATTTT-AC-TGAGCC--ATTATAAA----------AA------A------AC------TTT----TA-----------AACTTT--GATTC-ACA-TTGAAAA--AG-TTTG--TTGATTCAGAA-TACAGTCTTTTTCACT-GT-G--AAC-TAATT-GAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G---NTCTTTCGGGCGTTGTNGT-CC-TTGAAATCAGATTGGTAATA-------TGAGG--TG-AAGCGAA-----CCATCC--C-T-GAAT-T-----------CACAT--TCTAAAATGG--AAAA--G-CA---TT-AATACA-ATAT-TGCA-T------------------AGTAAA---AC-GCTAC--------A-ATA-TATGAT--T--------ACAAC-TGCTTT-GATCAG-TGAATAAAGTA--TTACTGC--------ATATCAT-ACTTATTTT-GAAA-TAAATGTAC-AA-CTGTATTCAAAACTTGATG-C-A-TGTCATAG-TTTAAGTGTATAATA--AC-ATT-ATTAA--CACCTTTACTA-T-AAAACCCGG-AA-TAGTGCTT-GCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-TCAATGCTGA--CTTA-CCAAGAGCTAAATCCT--AACCTTTTTTTNAATC-TCAAACAATAATTT-CAGGTGAAACTGGCACCAT-G--GCTGTTACAATTGCAGATGCTCGTTAATTC--C-T-C-AT-G--TTTTTGGGAT-GGCTGTGTCGACTTA--GGATGTTTC-GT--CCAATT-ACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTT-AGATCTGAAAAAAAAATTAAATCTATA-TTATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TATT-TAT-------T---T--T--TTTTAAAT-A-AAA-AA-TAAAT----GAAAA---TGT-GA----CTA--TTG--TAGC----CCAGCATAGAATCCTACTATGTA-ACACT-GATAGGAAAAG---GTACT-TTAAA-TGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGT---ATAG-TACCCCCC------CCCCCCC---CCCCCCCTC-----TGAACGTG-CC---TA---------T-A-ACACA-AANCA--TG----CC--G-----AT-GCAT-AAACCTT-NTCTTGTTTTCAATTAAGCCATAAATTGA-A-C--TTTA---ATGATATG-AG-A-TACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTA----AT------AGATA-A--C-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CCAAA-G--GG-TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTCT---A-A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATATCTCG-T-AAATCACAT
Reference ( gi|6 ) : TAATTCAAAATCATGCATATTACTTTTTGAATAGTCA-TTGATG-----TGACAGA--TTT-A--TGA-----ATTATAAA----------AA------A------AC------TTT----TA-----------AACTT---GATTC-ACA-TTGAAAA--A--TTT---TTGAT-CAGAA-TACA-TCTTTTTCACT-GT-G--A-C-TAATT-GAG-GTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCACAACTATGA-G---GTCTTTCGGGTGTTGTAGT-C--TTGAA-TCAGAT-GGTAATA-------TGAGG--T--AAGCGAA-----CCATCC--C-T-GA---T-----------CACAT--TCTAAAATGG--AAAA--G-CA---TT-AA-ACA-ATGT-T-CA--------------------A-TAAA---AC-GCT-C--------A-ATA-T--GAT--T--------ACAAC-TGCTTT-GATCAG-TGAATAAAGTA--TTACTGC--------ATG-CAT-ACTTATTTT-GAAA-TAAATGTAC-AA-CTGTATTCAAAACTTGATGGC-A-TGT-ATAG-TT-AAGTGTA-AA-A--AC-ATT-ATTAA--CACCTTTACTA-T-AAAACCT---AA-TAGTG-TT-GCATTTCATTCATAAAA-GTTATCATAATATTATAATATTGAAGC---ATAGG-TCAATGCT-A--CTTA-C-AAAAGCTAAATCCT--A--CTTTTTTTAAATC-TCAAACAATAATTT-CAGGTGAAACTGGCA--AT-G--TCTGTTACAATTGCAGATGCT-GTTAATTC--C-T-C-AT-G--TTTTTGGGAT-GGCTGTGTCGACTTA--GGATGTTTT-GT--C-AATT-ACAGTTGCATTTTACTTCAGTTTT-ACTTCCCTCC-T--AGATCTGAAAAAAAAATTAAATCTAT--TTAT-AATATCAC-TGTTAGCAATAGC-ACTTGATC------TATT-TAT-------T---T--T--TTTTAAAT-A-AAA-AA-TAAAT----GAAAA---TGT-GA----CTA--TTG--TAGC----TCAGCATAGAATCCTACTATGTA-ACACT-GATAGGAAAAG---GTACT-TTAAA-TGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGT---ATAG-TACCCCCC------CCCCCCC---CCCCCCCTC-----TGAACGTG-CC---TA---------T-A-ACACA-AATCA--TG----CC--G-----AT-GCAT-AAACCTT-G-CTTGTTTTCAATTAAGCCATAAATTGA-A-C--TTTA---ATGATATG-AG-A-TACAGAAAAACG--CATTAT--GCATGTA-TCTAG--CTA----AT------AGAT--A--C-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-TCACTGATGGT--TATTACAC-G-CAATTCG-CCAAAGG--GG-TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT---T-A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACAT
gi|3 : TAGTAATTTATGATTAG--G-TTGATGGAA--TGACAAA--TTTTAGCTGAGC---ATTATAAAGACTGCAAAAAA------ATACGTTAC------TTTATAATA-----------AACTTT--GATTC-ACA-TTGAAAA--AAGTTTG--TTGAT-CAGAT-GACA-TCTTTT-CACT-GT-G--A-AATAATT-GAGTGTCA--A---CGAATCCA-AACTAGTT-AGTAAATCACAA--ATGATGT--GTCTTTCGGGTGTTGTAGT-CC-TTGAA-TCAGAT-GGTAATA-------TGAGG--TG-AAGCGAA-----CCATCA--T-G-AA---T-----------CACATATTCTAAAATGG--AAAAT-G-CA---TTTAATACA-ATATTT-CAATAAAACCTACAACTATGATA-TACA---ACTGCT-TTGATCATGA-ATAAG--GATAAT--------ACAAC-TGCTTT-GATCAGGTGAATAAAGTA--TTAC-GC--------ATA-CATCACTTATTTTTGAAAGTAAATGTAC-AA-CTGTATTCAAAAACTGATG-C-A-TGT-ATAG-TTTAAGTGTA-AA-ATAACCATTTATTAA--CACCTTTACTA-TTAAAACCCTGAAA-TAGTG-CT-GCATTTCATTCATAAAATGTTATCATAATATTA-AATA----AGC---ATAGACTCAATGCT-GACCTTA-CCAAGAGCGAAATCCTTAA--CTTTTTTTAAATCTTCAAACAAGAATTT--AGGTAAAACTGGCA--ATGG--TCTGTTAC-ATTACAGATGCT-GTTAATTC--C-
gi|4 : tgtatgctgaattcatccgaactcgacaattgtagcatagcaaagaagttgcaactggtgtgatcctgacaaagttatttaagtatatttgacaaatttctaaatgcataaacttaatatgtcccacttttgatactttcgaataaatccaaaattgaaaagagatgccacaacgttcattattaaaattggcacctattggtaggcaaataaagaatgcagaaatgtagacaaattccttcacattcttataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatatgatattcaaaacaaaatatttggaccagctttatgtgggcacatgtgaatatgctgctccccttctttgaaggagtttgcaagattcagcatcacatcaaagatcttaacacagtctacacatattcagtacatatctgaaaatctatacctattattttttggagaaagaagtaaatacatgttatactaaaataccatacatgtttgcatatttttttttttttatttattttattttgtttcatcaaatttaaatcaatcttattctgattgttttttacaaatctgcattacctaacaaaaatacaaaatcatttctctagcaaatgtatgcttatttaaatattttttgtaaagcttgacactatgtctatacatgtaaaggttcactgaaaactatgaaaagctgtcaaaaatatttattaatagccaacatgttcattacacagcttgaacatgttgcaagatgcaccagtagtaatatcacaataaagtacatgcatatttggatctgtgtttgATGATCAGTTGATGGAATTTGACAGAATTTT-AC-TGAGC---ATTATAAAGACTGCAA--AA------AT-----AC------TTT----TACTTTATAATAAAACTTT--GATTCCACA-TTGAAAA--AAGTTTG--TTGAT-CAGAAATACA-TCTTTTCC--T-GT-GGAA-C-TA--T-GAGTGTCA--ACGAAGAGTCCATCACTAGTT-AGTAAATCA-AACGCTGA-GT--GTCTTTCGG-TGTTGTGTC-C--TTGAA-TCAGAT-GGTAATA-------TGAGG--TGGAAGCGAA-----CCATCC--C-TTGAATAT-----------CACAT--TCTAAA-TGGCAAAAG--G-CAATTTT-AA-ACA-ATGT-TTCA--------------------A-TAAA---AC--CTAC--------ACATA-T--GAT--T--------ACAACATGCTTTTGATCAG-TGAATAAA-TA--TTACTGC--------ATA-CAT-ACTTATTTT-GAAA-TAA-TGTAC-AA-CTGTATTCAAAACTTGATG-C-A-TGT-ATAG-TTTAAGTGCA-AATA--AC-ATT-ATTAAAACACCTTTACTAGT-AAAACCTTG-AA-TAGTGCTT-GCCATTCATTCATAAAA-GTTATCATAATATTATAATA----AGCTAGATAGA-TCAAGTCT-G--ATTA-CCAGAAGCTAAATCCT--AA-CTTTTTTTAAATC-TCAA-CAATAATTTTCAGGTGAAACTGGCA---T-GGGTCTGTTACA-TTGCAGATGCT-TTTAATTC--C-TTC-AT-GAGTTTTTGGGAT-GGCTGTGTCGACATAATGGATGTTT--GT--CCAATTTACAGTTGCATTTTACTTCAGTTTT-ACTTCCCTCC-TTTA-ATCTGAAAAAAAAATTTAATCTATATTTATTAATATCAC--GTTAGCAATAGC-ACTTGATC------TATT-TAT-------TATTT--T--TTTTTAAT-A-AAA-AAATAAATTTTTGAAAAATTTGTTGAACCCCTAATTTGGTTAACGCCTTCAGCATAGAACCGTACTATGTA-ACACTTGAAAG--AAAG---GTACT-TTAAA-TGCATTT-GTTCATTGTG-G-AAT--AAATACGATTGTTGCACTCACT-GCACTGGAGGT---ATAGTTACCCCCCCCCCCGCCCCCCC---CCCCCCCTC-----TGAACG-G-CC---TA---------T-A-AAACACAATCAT-TG----CCT-G-----AT-GCAT-AAACCTG-T-CTTGTTTTCAATTAAGCCATAAATTGA-A-C---TTA---ATGATATGAAA-A-TACAG-AAAACG--CATTTG--GCATGTA-TCTAGGCCTA----AT------TGATA-A--C-GTCTAATA--CGC-AACCTATTA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGAT-GT--TAATACAC-G-AATTTCG-CCAAA-G--GG-TAG-CG-ATTCAACCTTATGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTTAATCTTG-G--TTAAA-T--C--CTTT---GAA-T-A--GTCACAATGATAAAC--GC-TA--CA--------------------CTATCTT------CATAAT----------CA-CTAC-T-CA----------CA--GT----C-C-CCTGGGT-C--A-C---CC---------G------A--------------GT-AC-CCGGATAAT--AAC--A-AAT-CAC-GTCATTTCTCG-T-GAATCACATg
gi|5 : agtacatgcatatttgatctgtgtttgtgctaatttATAATCAGTTG-TGGAAT-TGACAGAATTTT-AC-TGAGCC--ATTATAAA----------GACTGGCAA------AA------TAA----TA-----------AAATT---GATTC-ACACTTGAAAA--AG-TTTG--TTGATTCAGAA-TACAGTCTGTTTCACT-GT-G--AAC-TAATT-GAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G---TTCTTGCGGG-GT-GTAGT-CCCTTGAAATCAGATTGGTAATA-------TGAGG--TG-AAGCGAA-----C-ATCCACT-T-GAAT-T-----------CACAT--TCTAAAATGG--AAAAATG-CA---TT-AATACA-ATAT-TGCA--------------------AGTAAC---AC--CTAC--------A-ATA-TATGAT-----------ACAAC-TGCTTT-GACCAG---AATAAAGTA--TTACTGC--------ATATCAT-ACTTATTTT-GAAA-TAAATGTAC-AAACTG-ATTCAAAACTTGAT--C-AATGTCATAG-TTTAAGTGTATAATA--AC-AT--ATTAA--AAC-TTTACTA-T-AAA-CCTG--AA-TAGTGCTT-GCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-TCAATGCTGA--CTTA-CCAAGAGCTAAATCCT--AACTTTTTTTTCAATC-TCAAACAATA--TT-TAG-TGAAACTGGCACCAT-G--GCTGTTACA-TTGCAGATGCTCGTTAATTCGCT-T-CTAT----TTTTTGGGATTGGCTGTGGCGACTT---GGATGTTTT-GTTCC-AATT-ACAGTTGCTTTTTA-TTCAGTTTTTATCTCCCTCC-TT-AGATCTGAAAAAAAAATTAAATCTTA--TTAT-AAT-TCAC-TGTTAG-AATA-C-ACTTGATC------TATT--AT-------T---T--TGTTTTTAAAT-ATAAA-AA-TAAAT----GAAA----TGT-GA----CTA--TTG--TAGC-----CAGCATAGAATCCTACTATGTATACACT-GATAGGAAA-GTCTGTACTATTAAAATGCGTTTTGTTCATTGTGTGATAT--AAATATGATTG-TGCACT-ACT-GCACTGCAG-T----TAG-TACCCCCC------CCCCTCC---CCC----TC-----TGAACGTGGCC---TA---------TTA-ACACA-AA-CA--TG----CC--G-----ATTGCAT-AAAACTT-GTCTTGTTTTCAATTAAGCCCAAAATTGA-AAC--TTTA---ATGATATG-AG-A-ATCAGAAAAACG--CATTAT--GAATGTA-TCTAG--CTA----GTTTTTA-AGATA-A--C-GTCT-A------C-AACCTA--A-TTCCGC--ATTT-CT-C--GTGTAT-GCACTGATG----TATTACAC-GCCAATTCGCCCAAAGG--GGTTAG-CG-ATT-AA-CTTCTGCA--ACTTAT-TCTTAA--CT--GCTTT----CA--ATTTTTCA--TGTT----TTT-ATCTGTGG--TTAAA-T--C--CTTTAAAG-A-T-A--G-CACAATGAT-AAC--GCTTA--CATT-------------T----CTATCTT------C---A-----------CA-CTA--T-CA--------TCCA--GT----C-T-CT--GGT-C--A-C---CC---------G------A-------T------GT--T-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACAgacgagacttaacagacctat
gi|1 : agtacatgcatattttggatctgtgtttgtgttaaatttATAATCAGTTG-TGGAAT-TGACAGAATTTT-AC-TGAGCC--ATTATAAA----------GACTGGCAA------AA------TAA----TA-----------AAATT---GATTC-ACACTTGAAAA--AG-TTTG--TTGATTCAGAA-TACAGTCTGTTTCACT-GT-G--AAC-TAATT-GAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G---TTCTTGCGGG-GT-GTAGT-CCCTTGAAATCAGATTGGTAATA-------TGAGG--TG-AAGCGAA-----C-ATCCACT-T-GAAT-T-----------CACAT--TCTAAAATGG--AAAAATG-CA---TT-AATACA-ATAT-TGCA--------------------AGTAAC---AC--CTAC--------A-ATA-TATGAT-----------ACAAC-TGCTTT-GACCAG---AATAAAGTA--TTACTGC--------ATATCAT-ACTTATTTT-GAAA-TAAATGTACAAA-CTG-ATTCAAAACTTGAT--CAA-TGTCATAGTTT-AAGTGTATAATA--AC-A-T-ATTAA---AACTTTACTA-T--AAACCTG--AA-TAGTGCTT-GCATTTCA-TCATAAAATGTTATCATAATATTATAAT----AAGC---ATAGA-TCAATGCTGA--CTTACC-AAGAGCTAAATCCT--AACTTTTTTTTCAATC-TCAAACAAT-ATTT---AGTGAAACTGGCACCAT-G--GCTGTTAC-ATTGCAGATGCTCGTTAATTC--gacgagacttacagatt
gi|12 : aattatatctccaaactcatagtatctttatttcagagggtttgcagagtgtacaaaacttttgcagacaatttatagaaataagaaggaattcaaagaatatcgacaagcgcaattccctaaatggggggggggggggagggggggggttaattaagataacattttttttcttctgtatttgtcagaaagaaagcggaaggtcaactaaccgtgatcttattattagggggggggggggggggggggggggggcttgcgccttagactgtcactttcttgctagttataaactgctacatgtttcaagaagactcttacatgttgtattgtataatcgtataaaagagtgtaaaaagtaatcacatggcctttgagagaatgagttgattgtataaacctttatcctgtgtttcaattgaatttttttgggggctacatttaatttggggggggtatatgggcctgtaatattgtatatcatgtgaggtatgctgtcacatgtttataaaatttttattgaagggatcactgaattaattcggaagtgtcctagcacacgagatgttcctcacaagtcatgtaagaatttacggatggatctacaacaagtgactaatttaatgtcatttgtgatgcacttacattattttaaaagtgcaactcttgtgtgtattgctgagttcatccgactccgacaatttgtgagcatagcagaagtttcgcaaactgtgcgtcctgacaatcaataattatgtatatttgacaaacttttcaaatcggataacgcttaatatgtcccactttttactatcaactttcgataaaatccaaattttgaaaaaagagcatgcacaacttcatataaaaattggcattattaggattaggcaaataaaaagaatgcatgaaatgtagaacatattccttcacattctataaaaatttctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatacgatatcaaatcaaaatattctggaccagcttatgtggcacatgtgaaatatgctgtccccttttgacggtttggcagatccagcatcacattcgaagatttaacacagttgtaaacacatattcatgtcatatgcttgaatctatacatattatttttggagaaaaataggtaaaaatacttatactaaatacctacattgtttgcatatatttttttatttattttttttttttacaaatttaaatcaatctattcttagattgtttttaaattgcagttactaaacaaaaaatctacatccatttctctagcaaattgtatgttatttaaagattttttgtaatagtgaaactgaagaaaacttgtcaaacacatactcttagttatcaccatgtcattacgacgctgttcaacatgattgcaaggtgctcacgattacgtaatattacaaataaagtacatgcatattttggatctgtgtttgtgttaaatttATGATCAGTTGATGAATT-TGACAGAA-TTT-A----ACTCTTATTATATA----------AA------G------ACATAA--TTT----TA-------------CTTTATGAT---AAA-T-AAAAA--G--TTTG--TTGAT-CAGA--TACA-TATTTTTCACT-GTAA--A-C-TAATT-GAGCGACAATG---AGAGT-CA-TA----TT-AGTAAATCGCAAC
gi|19 : tagatattaaaatattcaaagtctgtgtggtccatgtgtatacgctactccacttttgaagcagtttgcagatgaacatcacattgaagatcttattaactcagtatatttacatgctatcaggctatcagcatatattcatgtatatcttgaatctgccacttccaaactctacatattatttttgaagtcaatgttaaataccatacatgtttgcaatttttttttacaaatttaaatttcctacaatttttaaatctgcattacctaacaaaaatatctaaaatccgtttctttagcaaatgcatattatttaattatttttgcaaagctggacactatgtctatacatgttaaaagttcattcaaaactatgaaaaactgtcaaaaatatttattaatagcccacatgtcattacacaactttgaacatgttgcaagatgcaccagtaatatcacaattaagtacatgtatattcggatctgtgtttgtgtttATGATCAGTTGATGAATTTTGACAGA--ATC-T--TAACTCTTATTATATA----------AA------G------ACATAATCTTT----TA-----------CGTTTAT-GAT---AAA-T-AAAAAGTA--TTG---TTGATTCAGA--TACAGTATATTTCACTAGT-A--AAC-TA-TT-GAGCGACAATG---AGAGTC-------AATT-AGTAAATCGCAACACTGG-GGATGTCTTTTGGA-GTTGTTGT-C--actgggtgtc
gi|17 : ccaccatgtattacacaacacctgtgaacatgttgcaagatgcaccagtaatatcacaattagtacatttgtatatctcgattctgtgttttgtgtttC-ACA-CTTAAAC-----TTTGCGTTGAC-TAGAA-TGCA-TCTTTGTAAAT-ATAG--A-C-TACTTCAAT-GCCC--GCA-GGAGTACA-CAC----T-AGTAA------------A-G---CTCTTTCCGGCGCGGTTGTCC--TTGAA-TCTGAT-GTCAATAATCATACTGCGGTTT--GAGTGAAGAAAGTCATCC--C-T-TA---CATACATGCAAACACAT--TCTAAAATGA--CAA------A---TT-AA-
gi|22 : ttcataattcagttgatgaaattgaaagaatttcctggtattataaattttgcaaaaatattatgtagtgtatgtgataaaactacac--AGGCAAA-----CCATCC--CCT-GAG--T-----------CACAT--TTTAAAACGG--CGAAT-GTCA---TT-AC-ACGTAT-T-T-TATTTGT---------------A-TACATATAC-G--------------ATA-T--TAT--TTACTTTATATAAC-TGCTTT-GATCAG-TGGTGAAAGTATTTTACTACAAGTACAAATA-TAT-ACTTATTTT-GACA-TAGAT-T-C-AG-CGGTATTCAAAACTTGAT-GC-A-AGT-AAAT-TT-TA-TGAA-AA-A--AA-A-----TAA--CA-GTTCACTG-T-AAAGCCC---AAGTAGTG-CTGGCA-TTCATCCATAGA---CTATCAAAGT-TTACAAcggcattccatctacatatatactattaaatcaac
gi|16 : gCAATGTTGA--CTTA-CCAAGAGCTAAATCCTA-A--CTTGTTggaata
gi|16 : aaaattataattagcatagataaactcttcatttcaATC-TCAAACAATAATTT-CAAGTGAAACT-GTA--AT-G--GC--------CTGC---TGCA-GTTAATTC--CTT-C-ATAG--TTGTTGGGAT-GGCTGTGTCGACTTG--GGATGTTTC-GT--CAAATT-ACAGTTGCATTTTACATCAGTTTT-ACATGCCTCCTT--AGATCTGAAAAAAA----AGACCAAT--TTAT-AATATCAC-TATTAACAATAAC-ACTTGATCTTTTTATATA-TAT-------T---T--T--TTTTAAAT-C-AAA-Acgcatacctctttagttttcagtgttgtagctgaaaatgggcactttatctcaaacaataatttcaagtgaaactgtaatggcctgctgcagttaattccttcatagttgttgggatggctgtgtcgacttgggatgtttcgtcaaattacagttgcattttacatcagttttacatgcctccttagatctgaaaaaaaagaccaatttataatatcactattaacaataacacttgatctttttatatatattttttttaaatcaaaatcaa
gi|11 : aaaattataattagcatagataaactcttcatttcacaatgttgacttaccaagagctaaatcctaacttgttcgcatacctctttagttttcagtgttgtagctgaaaatgggcactttTGGGAT-GGCTGT-T--ACTTA--GGATGTTTTTGT--CCAATT-ACAGTTGCATTT-ACTTCAGTTTTTACTTCCTCCT-T--AG-TCTGAAAAAAAA-TTAAATCTATA-TTATTAATATCAC-TGTTAGCAATAGCGACTTGATT------TATTATAT-------T---TATT--TTTTAAAG-A-AAATAA-TAAAT----GAAAAA--TGT-GA----CTAC-TTG--TAGC----TCAGCATAGAATCCTACTATGTA-ACACT-GATAGGAAAAG---GTACT-TTAAA-TGCGTTTTGTTCA-TGTG-GAAATAAAAATACGATT--TGCACTCACTCACACTGCAGGT---ATAT-AACCCCCCA-----CCCCCCC---CCTCCCCGA-----AGAACGTG-CCTTTTAT--------T-A-ACACA-AATCA--TG----CC--G-----AT-CCATAAAACCTT-G-TCTGTTTTCAATAAAGCCATAAATTGA-A-C--TTTA---TAGATATG-AGAA-TCAAGAAAAACGGCCATTAT--GCATGTATTCTAA--CTA----AT------AGATA-A--CGGTCT-ATA--C-CAAACCTA-TATTTCCGC--ATTTCCTCC--GTGTATGGCACTGATG----TATTACACGG-CAATTCG-CCAAA-G--GG-TAG-CGAATTAAACCTTCTGCA--TCTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG-------TT-ATCTGT-G--GTTAA-T--C--CTTTA--A-A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------A----CTATCTT------C---ATC---------CA-CTAC-TGCA--------T-CA---T----C-T-CC-GGGT-C--A-C---CC---------G------A-------T------GT-A--CCGGA-AGT--AAA--CAAAT-CAC--TCATTTCTCtcaa
gi|30 : TT-ACAGTTGCATTTTACTTCAGTTTT-ATTTGCCTCCTT--AGATCTG-AAAAAAAATGCAATCTAT-----C-AATGTTACATG-TAGCAATAGC-ACTTGATC------TATT-TCTTTCTTTCT---T--T--TTTTAAATAA-AAA-AA-TAAAT----GAAAA---
gi|14 : A-AA-TAAA-----AAAAA---TAT-GA----CAA--TTG--TAGT----CCAACATAGAATCCTACTATGTA-ACACT-GATAGGAAAAC---GAATT-TTCAA-TGCATTT-GTCC-TTGTA-AAAAT--AAATATGATTG-TGCACT----------GCAGGT---AAAG-TACCCACC------CCCTCC-----------TC-----TGAACGTG-TC---TA---------T-TTACACA-AAGCA--TG----TC--T-----AT-GGAT-ACACCTT-CTCTTGTTTTCAATTAAGCCATAATTTAA-A-C--TTTA---ATGATTTG-GG-AATACATAAATACG--TATTATATGCATGTA-TCTAG--CTC----AT------AGAT--AAAC-GTCT-ATA--C-C-AACCT--CA-TCCCGC--ATTTCCT-C--GTGTA---CACTGGTGGTTATATTACAC-G-CAATTCG-TCAAAAG--GG-TAG-CT-ATT-AACCTTCTTCG--ACTT-T-TCT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGTGG--TTAAA-T--C--CTCCA--A-A-T-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------C---AT----------CA-TTA--------------------------C-T-CCTGGGT-CATA-C---CC---------GATTGTCA-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTTATATCTCG-T-AAGTCACAT
gi|15 : -AA-TAAA-----AAAAA---TAT-GA----CAA--TTG--TAGT----CCAACATAGAATCCTACTATGTA-ACACT-GATAGGAAAAC---G-A-T-TTCAA-TGCATTT-GTCC-TTGTA-AAAAT--AA-TATGATTG-TGCACT----------GCAGGT---AAAG-TACCCACC------CCCTCCT---T----------------ACGTG-TC---TA---------T-TTACACA-AGAAG--TT----CTAGG-----AT-AC------CCTT-CTCTTGTTTTCAATTAAGCCATAATTTAA-A-C--TTTA---ATGATTTG-GG-A-TAC-TAAATACG--TATTATA-GCATTTA-TCTAG--CTC----AT------AGATAAA--C-GTCT-ATA--C-C-AACCT--CA-TCCCCG--ATTTCCT-C--GTGTA---CACTGGTGTTA-TATTACAC-G-CAATTCG-TCAAA-A--GG-TAG-CT-ATT-AACCTTCTTCG--ACTT-TCTTT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGT-GGTTTAAA-T--C--CTCA---A-A-TCA--A-CA-GAT-AT-AAC--GC-TA--TA---------------T----CTATC-T------C---AT----------CATCTA--------------------------C-T-CCTGGGT-CATA-C---CC---------G------A-------TTGTCTAGT-AC-CCGGA-AGT---AA--C-AAT-CACAGTTAT---TCG-T-AAGTCACATgacgagacttacagaccctatt
gi|2 : TACAGGCGCAATA--TACCCCCC------CCCCCCCACTCCCCACCCCAAAATTAATTGTG-CC---C----------C-A-AAAAA-AATCAATTGAACACA--GGAAGTAT-ACAT-CAAC--------TATTCTC-ATCAAGCCATA---TGAGA-CTTTTTATACATTATACG-A--A-TACAgacgagacttacagaccctat
gi|33 : atagggtctgtaagtctcgttagtttcactttcgcttttactacttccgggtacatcaacgtgaacttgtactatacaaacgttgaatggttccaaatacataattttgtgcatgtttttgcaatcggatgtacacacaagaccgggaaaaccctcctcatagttgatttggattccctatcgatgctaagtaggctaacccttaaggaagcggtgaatacaaagtaaagtaggtaagtacgatcataatcgataaataaaatgtaaagtgatattaaatatatctccgaactcatagtatctttatttcagaggtttgcagatgtacaaaatttttgcagacaaactatagaaataagaaaaggaattaaaagaatatcgacaacgaattccctaaatggggggggggggttaagttttttaagataacattttttttctgtatttgtcagaaaaaaggcggaggtacaactaatcgcggtgatcttattattaggaagggtgctggggggggggggtattgcgcctagactgtcacttcttgctacatgagtataaactagctacatgtttcaagaagactcttacatgttgtaCCAC---CCCCCCCCC-----CGAACGTG-CC---TATGCGCCTATT-A-ATACA-AAGCA--TG----CC--T-----AT-GCAT-AAACCTTCT-CTTGTTTTCAATTaatattgtatacatgggtatctttcacatgtttaaaatttttattgagggatcatgaaacttggatgtccagcaactgaaatgccatgatccatgccaagtcatttgagaaatttacgatggatacaacaaagtgcctaatttaatgtcattatggatgcacttaattataagtgcaactcttggtggtatgctgaattcatccgactcgacaattgtagcatagcaaagaagttgcaaactggtgctgatcctgacaaagttttagtatttttgacaaatttcaatggcataacacttaatatgtcacttttaatactttcgaataaatccaaaattgaaaagacatgcacaacttcattataaattggcattttagtataggaaataaaagaatgcatgaatgtagacatattcttcacatttctataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcagtatagatatcaaaatcaatattctggacccagctttattggcacatgtgaatatgttgctcccttgaaggagtttcagatgcagcatcacattcaagatcttaacacagttacacatattctgtacatatcttgaatctatcatattatttttggagaaagaaggtaaatcatgtatactaaataccatacatgtttggcatattattttttttttatttctttatttattttatttttttagcactttttaaatcaatcttattctgattgttttttaaatctgcattactagacaaaaatatctaaaatccattctctagcaattatgttatttaaaggattttttgtaaagttgacactatgtctatacagtaaaaggttcacttgaaaactatgaaaaaactgtcaaaaaattatttattatagccacatgtcattacacagctttgaacatttgcaagatgcccattacgtaatat
gi|34 : ctttcaatgcatttgttcttgtaaaaatagatatgacaAAACG--TATTATATGCATGTA-CCTAG--CTC----ATTCATGTAGAT--AA-C-GTCT-ATA--T-C-GACCTT-TA-TTCCGC--ATTTCCT-C--GTGTA---GATTAATGGTTATATTACAC-G-CAATTCG-ACAAA
gi|18 : CATGTA-TCTAG--CTAGTAAAT------AGTT--A--C-GTCT-AGATTC-C-AACC-A-TA-TTCCAC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CCAAAGG--GG-TAG-CG-ATT-AACCTTCTGCA--ACTT-T-CCT--A--CT--GC-TT----CA--A-TTTTCA--TA------TTT-ATCTGTGG--TTTGT-T--C--CTTTA--A-A-T-A--A-CACAATGAT-AAT--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTA--------------------------C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAC-CCC-GCCATTTCTCG-T-GAATCACAT
gi|23 : cTA-TA-TTCCGTCAATTTCCT-CTCGTGTAT--CACTGATG-T--TAT-ACAC-G-CATTTCG-CCAAATGTAGG-TAGTCG-A----ACCT-CTGCATAACTT-T-TCT--ATACT--GC-TTT---CA--A-TTT-CA--TG------TTT-ATCTGT-G--GTAAAAT--C--CTTT---T-AAT-ATTG-CACAAT-AT-CAC--GC-AA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--ACC---CC---------A------A-------T------G--ACACCGGA-AGTAGAAA--C-AAT-CAC--TCAT---CCGAT-GAATCACAgacgagacttacagaccct
gi|24 : ctaACCTTCTGCA--ACCT-T-TCT--A--CTAAGC-TTATTTCAGAA-TTTTCAAATG------TT--AT-TGT-GG-TTAAA-TATCAACTTT---A-A-T-A--G-CACAATGAT-GAC--GC-TA--CACGTGCCATAGGGTGGT----CCACCTTATTCCAC---ATCTAATCTTATCA-CTACTT-CAATTAAATGT-CATAGT----CCT-TCTGGGT-C----CTCACC---------G------A-------T------GTAAC-CCGG--AGT--AAA--C-AAG-CACTGTCATTTCTCG-T-GAATCACATgacgaacttaccagacccta
gi|27 : tag-TTT--A--CT--GC-TT----CA--A-TTTTAA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTCT---C-AAT-A-----ACAATGAT-AACACGC-TA--TA---------------T----CTCTCTT------T---AT----------CG-CTAC-T-CC--------T-GG--GT----CATACCCGAGT-G--------TC---------G------A-------T------GT-AC-CCGAA-AGC--AAA--C-AAT-CAC-GCTATATTTCG-T-CAATCACATgacgagacttacagactccta
gi|28 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTAAA-T--C--CTCT---A-AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA---------------GGGT-T--A-C---ACACGAGAATGG------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAG-CAT-GTTTTATCTCG-T-AAATCATATgacgaaacttacagacccta
gi|29 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTA---T--C--CTCT---A-AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA--G--------------GTAC--A-C---AC---------G------AGAATGGAT------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttacagacccta
gi|35 : ACAATGAT-AAT--TC-TATACA---------------TGTAACTATCTT------T---AT----------CA-TTAC-T-CT--------T-GA--GTGACAC-T-CGCGAG--C--G-T---C----------G------A-------T------GT-AC-CCAAA-TGT--AAA--T-AAT-CAC-GCCATATCTCG-T-AAATCAgacgagacttacagacccta
gi|43 : acaat---------G------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATAT
gi|48 : -AC-CCGAA-AGT--AAAATA-AAT-CTC-GCTATATCTCG-TAAAATCACATgacgagacttacagaccctat
23 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|7 ): TAGACTGCCACTTCTTGCCAGTATAAACTGCTGCATGTTTCAAGAAGACCCTTACATGTTTTATTGTATAATCTTATAAAAAGTCTCACATGGCCTTGATGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAACTGAAATGCCTAGGATCCATGCCAAAGTGGGGGGGTATTGCCCCTGTAAATATTTATGTGGGTACTTTCACATGTTTTAAATTTTTTATTGAAGGGATCATGAAAACTTGGAGTGTCCAGCCAACTGAAATGCCTAGGATCCATGCCAAAGTCATTTGAAGAATTTACGATGGATACAACAAGTGACTAATTTAATGTCATTGTGATGATCAACTCTTGTATGCTGAATTCATCCGACTCGACAATTGTAGCATAGCAAAGAAGTTGCAACTGGTGCTGATCCTGACAAAGTATTTAGTATATTTGAAAATTTTCAAATGGCATAACACTTAATATTCCCCTTTTTAATACTTTCGAATAAATCCAAAATTGAAAAAGAGCATGCACAACTTCATTATGAATTGANNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGACAGAAGCTAGCAGATCGTGTCCTATTTGGATAGGCAAATAACAGAATGCATGAAATGTAGACATAGACATATTCCTTCACATTTCAATAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTAGATATCAAATTTATCAAAATATTCCAGCTTTATGTGGCACATGTGAATATGCTGCTCCCCTTTTGAAGGAGTTTGCAGATCAGCATCACATTGAATATACAGTTACACATATTCATGTACATTTCTTGAATCTATACATATTATTTTTGTAGAGAAAAAAGGTAAATACTAAATACCATATATGTTTGC
Unaligned ( gi|8 ): AGTACTGTAGTACTCAGTTTAGTTTCACTATTCGCTTTTACTACTGTTCCCGGGTACATCAACCAGTATGGAACTTGTCTGATCACACATTCATAATACTTTGCCCCTACTAAAATAAACGTATAGAATCGGTGGTACTCAATTACATTAATTTTGTGCATTTGTTTGTGAGCATCGATTGTCACCAAGCACCGGAAAAACACCTGTGCTCATCATAGATTGATTTGGACTCCTCCTTATTCGATGCTATAGTAGAGCCTAACCACTATAAGGAAAGTGGTGAAACAATACAAAGTAAAGTAGGTAGTACGTATCATTAATCGATAAATAACGAAGTGTAAATGTGATAATAATATTCTCCAAACTCCCATGAGTCAATCTGTTATTTCAGAGGGTTTGCTTAGATGTACAAAATTTTTTGCAGACAAACTCATAGAAAATAGAGAAAAGGAATTACAAGAATAATTCTCGAAACAACGAATTCCCCTAAAATGGTGGGGGAGGGGCGGGGTGTAGGGGGGGGGGTGTTTAAATGTTTTAAGAATGCGATAACTTTTTTCTACTTGTTATTTTTTGAATCAGAAAAAGAAGGCGGAGGTACCAACTAATCCGGTGATCATTATTATTATGGCAAGGGTGACTGGGGGGGGGAGGGACTTGTCGCCTTAACTGTCACTTCTTGCTAGTTAATATCACCTGCTACATATGTTTCAAAGAAGACTCGACATGTTGTGATTGTAGTAATCGATAAAAGTGGTATAAAAAGTCTCACATGGCCTTGATAGAGAATGAGTTGATTGTTATAATACATATTCCAATGGTTCATTGATAGTAATTTTAATATTGGGGGCTACAATTTAATTTGGGGGGGTAGGGAGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGAGGGGGGGGCAGAGAGGGGTGGGGTATATTGCGCCTGATAATATATTGTATAACATTGTGGGGGTATCCTTTCACAATGTTATAAAATTTATT
Unaligned ( gi|9 ): GATGTCAAATTGGACGAATGTAAAGTGACAGAATACATCTCCGATCTCGTAGTATCGTTATTACAGAGGGTTAGCAGATGTACAAAAAAAATTTGCAGACACACTATAGAAAAAAAAAAGAGTTAAAAGAATATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATCAGTTTTAAGATATTTTTTGCTATATAACTCCCTTCTGTCAGAAAAAGGCGAAGGTACAACTAATCCGGTGATCTAATTTTTATTATACCTATATATGGAAGAAGAATGCCCTTTGCTAGAGGGGGAACATTAGGCCTGCCACTTCTTGTCATTATAGTATTATTGTTATAATTCATAAAAAAAAGTATCCATGTACTTGATGAGAAATGAATATGATTATATAGATTTATCCTGTGTTGATTTTTGGAAGCTACAAGTTCAATTTTGTTGTTGAGGGGGAGGGGGTGTTAACATGCTCTGTAGAATCATATGTCTGGTGGTTACTTTTCACAATGTCCTATAAATGAGGAAACATGAAAACTAGTGTAGTGTCCCATCCCAACTGATCAAAATGCCCTAGGATGCCATGCTAAAGTCCCCATTTTAAAGAGTTTGCGCACATGGATAACAACAAAGTGAACTACATATAGCATTTCTGTGATGCATTTAAGTGAGTCTTGCGTTTTGTATTATAAATTGTATGCTGGATTCAACCGACTTGAAATATTGGTAGTATAAACAAAGAAGTTGGAAGCACTGGTTAGCTGATCCTGACAAAGTATTTTAGTATA
Unaligned ( gi|10 ): AAGTGTGTGTGTGGGGGTGGGGTGGGGGGTTGATACTACTCGCCCGTATATAAACTGCTTTATGTTTCGAGAGAATTCGTATACTTTTTAATGTTTAATCATGTAAGAACGTCTCATGGCCTTAATAAGAATGAATTGATTGTAAAAATCATTCTGTGATAAATACAATTGTTGAGGAGTACAAATATTCTTACAGACATCTATTCTGTAGGTACTTTTCACATATTTACAAAATTTTGTTTGAGTGGATGATGAAAACTGTAGGAGTGTCCAGTCCACTGAAATGCCAATTGAGGATCCATGCCACAGTCATTTGAAGAACTTGCATTTACTATGAAATATTGTAATGGACACAACAGAAGAGGCACTATGTCCAAATGGACATAAACGGCCAGTCCATGCCGTACAGTAATTACAAGGGTCGCCATTTAGAAAAGACTTTAATATGCGTTGTGCTAATGCAGCTCTTGTGTTTGGTTCCAAAGTGTATGCTGGATTCAACACGGACTTGGCAATTGTGGCAATAGAGAAGTTCAAGCTGGTGCTATGGTCCTGACATTAAAAGGATTTTACTAAGTATATTCAAGATAAACTTACAAATGGCATGCCGCTTTTGTCCAACACTTTCTTGCAAATAAAAGAGCATGCACAACTTTGCTACAAACTTTTCAGAAACAGAATACATGTACTCTGTTGGATAAGCAAACAATACAAAAATTTTATTTGAAATTCATATTCCATCAC
Unaligned ( gi|13 ): ACATATTCCATCACAGTATACATGTCAAACTATTCGAACTTTATGTGGCCTATGTGAATTTGCTACTCATTACAGATAATTATGAGAATGAAGATCGTGCGGACTCAGTAGATCAATTGTACCTAAATGTATATCTTGAATCTGCCCAAATTTAACAATATTGAACCTCTACATGTTATTTTTAAAGTTAATAGCTATAAATATCATACACGTTACATATGGTTTTTTTTTATTTTTAATCATTTAAGCTTTTTGTTCTGATTCAGAGTGTTTTCAAATATGCATAAATTACACAATATATTTAAAATATATATCTCGCTAGCATATGTATGTTGTTTAATGAGTTTTGTTTTTGGTAAAGCTGGACACTATGGCTATGCCTATGCATCTATAGGTTAATCAAAAACTATGTCAAAAATGTTTATTAATATTTGTAGCAACATGTAATTACGTAGCTTCGAACATGTTGAAAGCTGCATCATTAATGTCATAATAAAGTACATGTAGTTTTGATTCTGTGTGTGTATTTATTATAATCAGTTAATAGATTTGAAAGGGTTTTACATGCATTGTAAATACTGCGAAACTACTCTTACTTTGATAAAATTCTATTACATGTAAAATGTTTGCTGATCAGAATCCATCTTTTT
Unaligned ( gi|20 ): ATAATTTTATTTTATTTTTTTTTAGCCAAATTCCATTGGACACAGTACAGATATCAATCTATTAAAGAATCCGAGCTTTGTGTGGCCTATATAAATCTGCTTGCTCTCATTTTGAAAGAGATTGCAGACAAGCATGACATTGAAGATCTTACAAACTCAGTAGATTTTAAATTGCACATAGTCATACATTGTGCATGTATATCTCAAATCTGCACAAATTGGTCACTTCAAAATTCTATATATTATAAAAAAAATATTTCTTAAGTTAAAATAGTAAATACCAT
Unaligned ( gi|21 ): ATAGGGTCTGTAAGTCTCGTTTAGTTTCACGTTTCGCTTTCACTACTTCGCGGGTACATCAACGTATGGAAATTGTACTATTCACAACGTTGAATCGGTCCAATACATTAATTTTTGCTTGTTTGCAATTCGGAATGTAGCACACAAAGACCGGGAAAACCTTGCCTCATAGGTTTGATATTGGATTCCCTATCGATGCTAAGTAGGCCTAAACCTAAGGAAGCGGTAATACAAAGTAAAGTAGGTATCGATCATTAATCGATAACTAATGAATGTAAG
Unaligned ( gi|25 ): ATATGGTCTGTAAGTCTCGTTTAGTTTCACTTTCACTTTTACTACCTCCGGGTACATCAACGTATGGAACATATACTATCACAATGTTGAATTGGTCCCAATACATAATTTTGTGCGTTGTTTTGCAATCGGATGTACACAAAAGACAATGGGAAAACCCTGCCTCATAGTTGATTCGGATTCCCTATCGATGCTAACTATAAGGAAGATGTGAATACAAAGT
Unaligned ( gi|26 ): AGTACAATCATAATCGATGAATGATGTCGAATTGGACGAATGTAAAGTGACAGAATATATCTCCGAACTCGTAGTATCGTTATTTCAGAGTGTTAGCAGATGTACAAACATTTTTGCAGACAAACTATAGAAAGATTTTTTTTAAAAAGAATATTGACTAAGAATTTCCTAAATAAGGGGTGGGGGCGGGTCGGTTTTG
Unaligned ( gi|31 ): GTACATATCTTGAATCTATACATATTATTTCTGGAGAGAAAAAAAGGTAAATATAGTAAATACCATACATGTTTACATATATATTTTTTTATTATTTACAAATTTAAATCAATCTTATTCTGAT
Unaligned ( gi|32 ): TGTAAAGGTTCATTGAAAACTATGAAAAATTGTCAAAGATATTTATTAATAGACCACAAGTCATTGATTACACAACTTTGAACATGATGCGAGATGCACCAGTAATATCACAATAAAGTACA
Unaligned ( gi|36 ): GTATATTTAACAACCTTCCAAATGGCTTAACACTTAATAGCCCACCCTATCCTTTCTTACAATCAAATCCCACTTCACAAATGAGGAAGCACAACTTTGTTATAGAAAT
Unaligned ( gi|37 ): TTTGCAATCGGATGTACACACAAGACTTGGGAAACCCTACCTGATAATTAATTTGGATTGCCTATCGGTGCTAGGTATTCCTAAAGGAAGCGGTGAATACAAAGTTAA
Unaligned ( gi|38 ): TATTTATTTATCTTTATTTTTTTTTTTACAAATTAATCAATCTTATTCTGATTGTTTTTAATCTGCATTACCTAACAAAAATATCTAAAACCATTTTCTAGCAA
Unaligned ( gi|39 ): ATAGGGTATATAAGTCTCGACTTAGTTTCACCTTCACTTTTACTATTTCCGGGTACATCAACGGTATCAAAAATATGTATACTATTCCAAAACGTTGTAATC
Unaligned ( gi|40 ): ATTTTTATTATTTCTCTATATGGAAGAAAAATGCCCTTGCTAGAGAGAGAGAGAGAGGGGGGGGAGCTTGCACCTAGACTGCCACTTCTTGCTAGTATAAAC
Unaligned ( gi|41 ): TTGCAAACTGGTGCTAATCCTAACAGACAAGCAATTTAGTATATTTGACAAACTTTCAAATTGCATGACACTTAACATGTCACTCTTTCTTACAAATTC
Unaligned ( gi|42 ): AATATCGACAACGAATTCCCTAAATGGGGGAGGGGTTAAGTTTTAAGATACCATTTTTTTTCTGTATTTGTCAGAAAAAGGCGGAGGTACAACTAATC
Unaligned ( gi|44 ): GGGGGGGGGGGGGGGGGGGGGGCTGTTTTTGCCTTTAAAAACAAACTTTAATTTTCAT
Unaligned ( gi|45 ): GTAATGATTGCAAATTGTCTCTTAATCACATGACGAGACTTACAGACCCTATA
Unaligned ( gi|46 ): AAACAATCTCGCTATATCTCATCAATCATGTGACTAGGCTTACAGGCCCAAT
Unaligned ( gi|47 ): ATAGGGTCTGTAAGTCTCGTGTAGTTTCACTTTCGCTTTTACTACTTCCGG
Unaligned ( gi|49 ): AATAGGGTCTGTAAGTCTCGTTTAGTTT
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 3333 11 333333333333 44444444444444444444444444444444444444444444444444444444444444444444444 11 2 333333 11 1 22222 1 1 1 333333 22222222 44444444444444444444 2222 111 11 8888888888888888888888888888888888888888888888888888888888888888 11 22222222 1 1 1 1 11 1 22 1 1111 111 444444444444444 22 33 11 22 11 22222222 111 11 1 111 2222222 111111 33333333333333 11111 111 1111 11 111 1 111111 111 444444444 11 1 22 222222 11111 111 2222 111 1 1111 222222 1 2 22222222222222222222 1111111111 44444444444444444444444444 11111111111111111111111111111111111111111
lowQualScore : 2 5 6666 4 1 4 00 222222222222 22222222222222222222222222222222222222222222222222222222222222222222222 8 55 8 4 66 00 4 3 5 5 6 6 333333 5 00 1 444 5 11111 8 8 6 3 5 222222 44444444 5 4 00000000000000000000 77 2222 000 5 00 5 7777777777777777777777777777777777777777777777777777777777777777 5 6 44 99 44444444 5 6 6 6 3 7 6 9 6 3 6 88 99 0 6 6 9 55 3 3 9 1 0 4444 111 6 111111111111111 6 6 1 6 7 11 00 55 66 66 6 99999999 8 444 77 8 5 6 5 777 9 3 3333333 1 6 1 6 999999 6 33333333333333 888 5 5 77777 555 6 4444 55 99 99 3 99 6 6 3 111 3 1 6 6 7 7 6 99 6 0 6 5 4 11 5 666666 6 333 5 000 000000000 5 5 6 5 33 5 5 1 6 3 6 77 55 5 66 666666 55555 5 55 7777 5 999 4 66 4 66 555 2222 4 4 4 4 666 66 5 5 0 66 4 4 55 55 55 3 0000 44 3 44 333333 3 0 77 3 44 44 0 555 6 3 8888 3 44 3 44 66666666666666666666 9999999999 6666666666 3 33333333333333333333333333 6 3 4 2 22222222222222222222222222222222222222222 2 2 2 33 66 5 5 7 2 2
lowQualScore : . . .... . . . .. ............ ....................................................................... . .. . . .. .. . . . . . . ...... . .. . ... . ..... . . . . . ...... ........ . . .................... .. .... ... . .. . ................................................................ . . .. .. ........ . . . . . . . . . . . .. .. . . . . .. . . . . . .... ... . ............... . . . . . .. .. .. .. .. . ........ . ... .. . . . . ... . . ....... . . . . ...... . .............. ... . . ..... ... . .... .. .. .. . .. . . . ... . . . . . . . .. . . . . . .. . ...... . ... . ... ......... . . . . .. . . . . . . .. .. . .. ...... ..... . .. .... . ... . .. . .. ... .... . . . . ... .. . . . .. . . .. .. .. . .... .. . .. ...... . . .. . .. .. . ... . . .... . .. . .. .................... .......... .......... . .......................... . . . . ......................................... . . . .. .. . . . . .
lowQualScore : 5 3 1111 4 9 7 66 000000000000 77777777777777777777777777777777777777777777777777777777777777777777777 9 77 9 4 11 99 4 3 0 0 2 2 444444 0 99 6 111 0 22222 3 4 6 3 5 222222 22222222 7 3 66666666666666666666 99 3333 000 7 11 7 4444444444444444444444444444444444444444444444444444444444444444 7 7 00 22 22222222 5 7 7 7 3 3 7 2 0 5 7 00 22 8 7 7 8 88 2 5 8 3 1 2222 777 7 777777777777777 7 3 0 7 3 77 00 88 88 00 7 88888888 0 888 66 0 0 7 5 888 8 3 8888888 7 7 0 7 222222 7 77777777777777 333 0 7 11111 777 7 2222 88 22 22 7 22 7 7 2 777 5 0 7 7 3 3 7 22 7 8 7 7 3 44 7 444444 6 666 7 000 000000000 7 7 6 7 66 7 7 0 7 3 7 99 66 0 99 999999 99999 0 11 0000 0 000 4 11 4 11 777 4444 4 4 4 4 777 99 0 0 0 11 4 0 55 55 55 3 4444 66 3 66 888888 3 0 99 3 66 66 0 888 7 3 7777 1 22 1 22 88888888888888888888 2222222222 5555555555 1 77777777777777777777777777 2 1 5 9 11111111111111111111111111111111111111111 5 5 5 44 33 3 3 9 9 9
consensus : NNNNNNNNNNNNNNNNNTANTAATTTATGAAT--TCAG-TTGATGGAATT--GACAGAATTTTA---C-TGAGC-CATTATAAAGACTGC----AAA------AC------TTT----TA-----------AACTT---TGAT---------TC-ACA-TTGAAAAA-GT-TTG--TTGATTCAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G---T-TCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TT-AATACA-ATATTTCA-A-GTAAAAC-CTACA-A------TATA---------CGAT---------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTA--TTACTGC--------ATATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGTA-AATAAC-ATT-ATTAA--CACCTTTACTA-T-AAAACCC-TGAATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGAC-TTACCAAGAGCTAAATCCTAACTTTTTTTTAAATC-TCAAACAATAATTT-CAGGTGAAACTGGCA--ATGG--CTGTTAC-ATTGCAGATGCTCGTTAATTC-CTTCAT-G--TTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAATT-ACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATCTATATT-ATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TATT-TAT-------T---T--TTTTTAAAT-A-AAA-AA-TAAAT----GAAAA---TGT-GA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACACT-GATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTGT-GCACTCACT-GCACTGCAGGTATAGT-ACCCCCC-CCCCC------CCCCCCCCCTCTGAACGT-GCC---TAT--------TA-ACACA-AANCAT-GCC--GA-TGCAT-AAACCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATGAG-A-TACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCTA-TA--C-C-AACCTAT-A-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAAC--AAT-CAC-GTCATNTCTCG-T-GAATCACAT
Reference ( family-506 ) : NNNNNNNNNNNNNNNNNTAGTAATTTATGAATGATCAG-TTGATGGAATT--GACAGAATTTTA---C-TGAGC-CATTATAAA----------AAA------AC------TTT----TA-----------AACTT---TGAT---------TC-ACA-TTGAAAAA-GT-TTG--TTGATTCAGAA-TACAGTCTTTTTCACT-GTG-AACTAATTGAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G---N-TCTTTCGGGCGTTGTNGTCC-TTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TT-AATACA-ATATTGCATA-GTAAAACGCTACA-A------TATA---------TGAT---------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTA--TTACTGC--------ATATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGTCATAGTTTAAGTGTATAATAAC-ATT-ATTAA--CACCTTTACTA-T-AAAACCC-GGAATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGAC-TTACCAAGAGCTAAATCCTAACCTTTTTTTNAATC-TCAAACAATAATTT-CAGGTGAAACTGGCACCATGG--CTGTTACAATTGCAGATGCTCGTTAATTC-CT-CAT-G--TTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTC-G-TCCAATT-ACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTAAATCTATATT-ATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TATT-TAT-------T---T--TTTTTAAAT-A-AAA-AA-TAAAT----GAAAA---TGT-GA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACACT-GATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTGT-GCACTCACT-GCACTGCAGGTATAGT-ACCCCCC-CCCCC------CCCCCCCCCTCTGAACGT-GCC---TA---------TA-ACACA-AANCAT-GCC--GA-TGCAT-AAACCTTNTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATGAG-A-TACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCTA-TA--C-C-AACCTAT-A-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTCT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAAC--AAT-CAC-GTCATATCTCG-T-AAATCACAT
gi|1 : AATTTATAA----TCAG-TTG-TGGAATT--GACAGAATTTTA---C-TGAGC-CATTATAAAGACTGGC---AAA------AT------AAT----AA-----------AA--T---TGAT---------TC-ACACTTGAAAAA-GT-TTG--TTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G---T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TT-AATACA-ATATTGCA-A-GTAACAC-CTACA-A------TATA---------TGAT----------------A---CAAC-TGCTTT-GACCAG---AATAAAGTA--TTACTGC--------ATATCAT-ACTTATTTT-GAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGTATAATAAC-AT--ATTAA--AAC-TTTACTA-T-AAA--CC-TGAATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGAC-TTACCAAGAGCTAAATCCTAACTTTTTTTTCAATC-TCAAACAAT-ATTT---AGTGAAACTGGCACCATGG--CTGTTAC-ATTGCAGATGCTCGTTAATTC-
gi|11 : aattatatctccaaactcatagtatctttatttcagagggtttgcagagtgtacaaaacttttgcagacaatttatagaaataagaaggaattcaaagaatatcgacaagcgcaattccctaaatggggggggggggggagggggggggttaattaagataacattttttttcttctgtatttgtcagaaagaaagcggaaggtcaactaaccgtgatcttattattagggggggggggggggggggggggggggcttgcgccttagactgtcactttcttgctagttataaactgctacatgtttcaagaagactcttacatgttgtattgtataatcgtataaaagagtgtaaaaagtaatcacatggcctttgagagaatgagttgattgtataaacctttatcctgtgtttcaattgaatttttttgggggctacatttaatttggggggggtatatgggcctgtaatattgtatatcatgtgaggtatgctgtcacatgtttataaaatttttattgaagggatcactgaattaattcggaagtgtcctagcacacgagatgttcctcacaagtcatgtaagaatttacggatggatctacaacaagtgactaatttaatgtcatttgtgatgcacttacattattttaaaagtgcaactcttgtgtgtattgctgagttcatccgactccgacaatttgtgagcatagcagaagtttcgcaaactgtgcgtcctgacaatcaataattatgtatatttgacaaacttttcaaatcggataacgcttaatatgtcccactttttactatcaactttcgataaaatccaaattttgaaaaaagagcatgcacaacttcatataaaaattggcattattaggattaggcaaataaaaagaatgcatgaaatgtagaacatattccttcacattctataaaaatttctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatacgatatcaaatcaaaatattctggaccagcttatgtggcacatgtgaaatatgctgtccccttttgacggtttggcagatccagcatcacattcgaagatttaacacagttgtaaacacatattcatgtcatatgcttgaatctatacatattatttttggagaaaaataggtaaaaatacttatactaaatacctacattgtttgcatatatttttttatttattttttttttttacaaatttaaatcaatctattcttagattgtttttaaattgcagttactaaacaaaaaatctacatccatttctctagcaaattgtatgttatttaaagattttttgtaatagtgaaactgaagaaaacttgtcaaacacatactcttagttatcaccatgtcattacgacgctgttcaacatgattgcaaggtgctcacgattacgtaatattacaaataaagtacatgcatattttggatctgtgtttgtgttaTGGGA-TGGCTGT-T--ACTTA--GGATGTTTTTG-TCCAATT-ACAGTTGCATTT-ACTTCAGTTTTTACTTCC-TCCTT-AG-TCTGAAAAAAAA-TTAAATCTATATT-ATTAATATCAC-TGTTAGCAATAGCGACTTGATT------TATTATAT-------T---TATTTTTTAAAG-A-AAATAA-TAAAT----GAAAAA--TGT-GA----CTAC-TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACACT-GATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCA-TGTG-GAAATAAAAATACGATT-T-GCACTCACTCACACTGCAGGTATATA-ACCCCCCACCCCC------CCCCTCCCCGAAGAACGT-GCCTTTTAT--------TA-ACACA-AATCAT-GCC--GA-TCCATAAAACCTTGTC-TGTTTTCAATAAAGCCATAAATTG-AACTTTATAGATATGAGAA-TCAAGAAAAACGGCCATTAT--GCATGTATTCTAA--CTAAT------AGAT-A---ACGGTCTA-TA--C-CAAACCTAT-ATTTCCGC--ATTTCCTCC--GTGTATGGCACTGATG----TATTACACGG-CAATTCG-CC-AAA---GGG--TAG-CGAATTAAACCTTCTGCA--TCTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG-------TT-ATCTGT-G--GTTAA-T--C--CTTTAA---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------A----CTATCTT------C---ATC---------CA-CTAC-TGCA--------T-CA---T----C-T-CC-GGGT-C--A-C---CC---------G------A-------T------GT-A--CCGGA-AGT--AAACA-AAT-CAC--TCATTTCTC
gi|12 : ATGATCAG-TTGATGAATTT--GACAGAATTTAA---C-T---CTTATTATATA----------AAG------ACATAA--TTT----T-------------ACTTTA-TGAT------------AAA-T--AAAAA-GT-TTG--TTGA-TCAG-A-TACA-TATTTTTCACT-GTA-AACTAATTGAGCGACAATG---AGAGT-CA-TA----TT-AGTAAATCGCAACACTGG-G---
gi|13 : tagatattaaaatattcaaagtctgtgtggtccatgtgtatacgctactccacttttgaagcagtttgcagatgaacatcacattgaagatcttattaactcagtatatttacatgctatcaggctatcagcatatattcatgtatatcttgaatctgccacttccaaactctacatattatttttgaagtcaatgttaaataccatacatgtttgcaatttttttttacaaatttaaatttcctacaatttttaaatctgcattacctaacaaaaatatctaaaatccgtttctttagcaaatgcatattatttaattatttttgcaaagctggacactatgtctatacatgttaaaagttcattcaaaactatgaaaaactgtcaaaaatatttattaatagcccacatgtcattacacaactttgaacatgttgcaagatgcaccagtaatatcacaattaagtacatgtatattcggatctgtgtttgtgtttATTTATTA-TAATCAG-TTAATAGATTT--GAAAGGGTTTTA---CATG----CATTGTAAATACTGCG---AAACT----AC------TCT----T-------------ACTT---TGATAAAATTCTATT-ACA-TGTAAAAT-GT-TTG--CTGA-TCAGAA-TCCA-TCTTTTTtgtc
gi|14 : acatattccatcacagtatacatgtcaaactattcgaactttatgtggcctatgtgaatttgctactcattacagataattatgagaatgaagatcgtgcggactcagtagatcaattgtacctaaatgtatatcttgaatctgcccaaatttaacaatattgaacctctacatgttatttttaaagttaatagctataaatatcatacacgttacatatggtttttttttatttttaatcatttaagctttttgttctgattcagagtgttttcaaatatgcataaattacacaatatatttaaaatatatatctcgctagcatatgtatgttgtttaatgagttttgtttttggtaaagctggacactatggctatgcctatgcatctataggttaatcaaaaactatgtcaaaaatgtttattaatatttgtagcaacatgtaattacgtagcttcgaacatgttgaaagctgcatcattaatgtcataataaagtacatgtagttttgattctgtgtgtgtA-AA-TAAA-----AAAAA---TAT-GA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACACT-GATAGGAAAAC---GAATT-TT-CAATGCA-TTTGTCC-TTGTA-AAAAT--AAATATGATTG----------T-GCACTGCAGGTAAAGT-A---------CCC------ACCCCCTCCTCTGAACGT-GTC---TAT--------TT-ACACA-AAGCAT-GTC--TA-TGGAT-ACACCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTGGGAA-TACATAAATACG--TATTATATGCATGTA-TCTAG--CTCAT------AGATAA---AC-GTCTA-TA--C-C-AACCT-C-A-TCCCGC--ATTTCCT-C--GTGTA---CACTGGTGGTTATATTACAC-G-CAATTCG-TCAAAA---GGG--TAG-CT-ATT-AACCTTCTTCG--ACTT-T-TCT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGTGG--TTAAA-T--C--CTCCAA---A-T-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------C---AT----------CA-TTA--------------------------C-T-CCTGGGT-CATA-C---CC---------GATTGTCA-------T------GT-AC-CCGGA-AGT--AAAC--AAT-CAC-GTTATATCTCG-T-AAGTCACAT
gi|15 : -AA-TAAA-----AAAAA---TAT-GA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACACT-GATAGGAAAAC---G-A-T-TT-CAATGCATTT-GTCC-TTGTA-AAAAT--AA-TATGATTGT-GCACT----------GCAGGTAAAGT-ACCCACC-CCCTC------CTT-----------ACGT-GTC---TA---------TTTACACA-AGAAGT-TCTAGGA-TAC------CCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTGGG-A-TAC-TAAATACG--TATTATA-GCATTTA-TCTAG--CTCAT------AGATAA---AC-GTCTA-TA--C-C-AACCT-C-A-TCCCCG--ATTTCCT-C--GTGTA---CACTGGTGTTA-TATTACAC-G-CAATTCG-TC-AAA---AGG--TAG-CT-ATT-AACCTTCTTCG--ACTT-TCTTT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGT-GGTTTAAA-T--C--CTCA-A---A-TCA--A-CA-GAT-AT-AAC--GC-TA--TA---------------T----CTATC-T------C---AT----------CATCTA--------------------------C-T-CCTGGGT-CATA-C---CC---------G------A-------TTGTCTAGT-AC-CCGGA-AGT---AAC--AAT-CACAGTTAT---TCG-T-AAGTCACATgacgagacttacagaccctatt
gi|16 : AAAATTATAATT----AGC---ATAGA-TAAACTCTTCATTTCACAATGTTGAC-TTACCAAGAGCTAAATCCTAACTTGTTgacgagacttacagaccctat
gi|16 : ATC-TCAAACAATAATTT-CAAGTGAAACTG-TA--ATGG--CC--TGC---TGCAG-------TTAATTC-CTTCATAG--TTGTTGGGA-TGGCTGTGTCGACTTG--GGATGTTTC-G-TCAAATT-ACAGTTGCATTTTACATCAG-TTTTACATGCCTCC-TTAGATCTGAAAAAAAAGACCAATTTA-------TAATATCAC-TATTAACAATAAC-ACTTGATCTTTTTATATA-TAT-------T---T--TTTTTAAAT-C-AAA-Acgcatacctctttagttttcagtgttgtagctgaaaatgggcactttatctcaaacaataatttcaagtgaaactgtaatggcctgctgcagttaattccttcatagttgttgggatggctgtgtcgacttgggatgtttcgtcaaattacagttgcattttacatcagttttacatgcctccttagatctgaaaaaaaagaccaatttataatatcactattaacaataacacttgatctttttatatatattttttttaaatcaaaatcaa
gi|17 : aaaattataattagcatagataaactcttcatttcacaatgttgacttaccaagagctaaatcctaacttgttcgcatacctctttagttttcagtgttgtagctgaaaatgggcactttTTCAT-AAT--TCAG-TTGATGAAATT--GAAAGAATTTC----C-TGG---TATTATAAATTTTGC----AAA------AA------TAT----TATGT--------AGTGTATGTGATAAAACTACACC-ACA-CTTAAAC---T-TTGCGTTGACT-AGAA-TGCA-TCTTTGTAAAT-ATA-GACTACTTCAATGCCC--GCA-GGAGTACA-CACTAGT------------AA-----A-G---C-TCTTTCCGGCGCGGTTGTCC-TTG-AATCTGATGTCAATAATCATACTGCGGTTTGA-GTG-AAGAAAGTCATCC--C-T-TACATACATGCAAACACATTCTAAAATGA--CAA-----A---TT-A--ACG-GCATTCCAT----------CTACATA------TATA---------CTAT---------------TAAATCAAC-tcaa
gi|18 : CATGTA-TCTAG--CTAGT------AAAT-AGTTAC-GTCTA-GATTC-C-AACC-AT-A-TTCCAC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAAG--GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-CCT--A--CT--GC-TT----CA--A-TTTTCA--TA------TTT-ATCTGTGG--TTTGT-T--C--CTTTAA---A-T-A--A-CACAATGAT-AAT--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTA--------------------------C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAAC--AAC-CCC-GCCATTTCTCG-T-GAATCACAT
gi|19 : cATGATCAG-TTGATG-AATTTTGACAGAATCTTAACTC-T-----TATTATATA----------AAG------ACATAATCTTT----TA-----------CGTTTA--TGAT------------AAA-T--AAAAA-GTATTG--TTGATTCAGA--TACAGTATATTTCACTAGTA-AACTA-TTGAGCGACAATG---AGAGTC-------AATT-AGTAAATCGCAACACTGG-GGATG-TCTTTTGGA-GTTGTTGTCgacgagacttacagaccct
gi|2 : ccaccatgtattacacaacacctgtgaacatgttgcaagatgcaccagtaatatcacaattagtacatttgtatatctcgattctgtgttttgtgtttT-C--A-CG--TT---------G------A-------T------GT-AC-CCGGA-AGT--A
gi|22 : atagggtctgtaagtctcgttagtttcactttcgcttttacG-AGGCAAACCATCC--CCT-GA-GT---------CACATTTTAAAACGG--CGAA---TG---TC-ATTACACGTATTTTATTTGTA------TACA--------TATA---------CGATATTATTTACTTTA--TA---TAAC-TGCTTT-GATCAG-TGGTGAAAGTATTTTACTACAAGTACAAATAT-AT-ACTTATTTT-GACA-TAGAT-T-CAG-CGGTATTCAAAACTTGATG-CAAGTAA-ATTTTA--TGAAAAAAAA--------TAA--CA-GTTCACTG-T-AAAGCCC--AAGTAGTGCTGGCA-TTCATCCATAGA---CTATCAAAGT-TTACAAacttgtactatacaaacgttgaatggttccaaatacataattttgtgcatgtttttgcaatcggatgtacacacaagaccgggaaaaccctcctcatagttgatttggattccctatcgatgctaagtaggctaacccttaaggaagcggtgaatacaaagtaaagtaggtaagtacgatcataatcgataaataaaatgtaaagtgatattaaatatatctccgaactcatagtatctttatttcagaggtttgcagatgtacaaaatttttgcagacaaactatagaaataagaaaaggaattaaaagaatatcgacaacgaattccctaaatggggggggggggttaagttttttaagataacattttttttctgtatttgtcagaaaaaaggcggaggtacaactaatcgcggtgatcttattattaggaagggtgctggggggggggggtattgcgcctagactgtcacttcttgctacatgagtataaactagctacatgtttcaagaagactcttacatgttgtatgtattcgtataatgtataaaaagtctcatatggcttgatgagaatagttgatgtatacttcctgtgttcaattgattttttttggggcacaattaattttggggtggggagtgggggggggggggtatattgcgcctgtaaatattgtatacatgggtatctttcacatgtttaaaatttttattgagggatcatgaaacttggatgtccagcaactgaaatgccatgatccatgccaagtcatttgagaaatttacgatggatacaacaaagtgcctaatttaatgtcattatggatgcacttaattataagtgcaactcttggtggtatgctgaattcatccgactcgacaattgtagcatagcaaagaagttgcaaactggtgctgatcctgacaaagttttagtatttttgacaaatttcaatggcataacacttaatatgtcacttttaatactttcgaataaatccaaaattgaaaagacatgcacaacttcattataaattggcattttagtataggaaataaaagaatgcatgaatgtagacatattcttcacatttctataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcagtatagatatcaaaatcaatattctggacccagctttattggcacatgtgaatatgttgctcccttgaaggagtttcagatgcagcatcacattcaagatcttaacacagttacacatattctgtacatatcttgaatctatcatattatttttggagaaagaaggtaaatcatgtatactaaataccatacatgtttggcatattattttttttttatttctttatttattttatttttttagcactttttaaatcaatcttattctgattgttttttaaatctgcattactagacaaaaatatctaaaatccattctctagcaattatgttatttaaaggattttttgtaaagttgacactatgtctatacagtaaaaggttcacttgaaaactatgaaaaaactgtcaaaaaattatttattatagccacatgtcattacacagctttgaacatttgcaagatgcccattacgtaatat
gi|23 : TAT-A-TTCCGTCAATTTCCT-CTCGTGTAT--CACTGATG-T--TAT-ACAC-G-CATTTCG-CC-AAATGTAGG--TAGTCG-A----ACCT-CTGCATAACTT-T-TCT--ATACT--GC-TTT---CA--A-TTT-CA--TG------TTT-ATCTGT-G--GTAAAAT--C--CTTTTA---A-T-ATTG-CACAAT-AT-CAC--GC-AA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--ACC---CC---------A------A-------T------G--ACACCGGA-AGTAGAAAC--AAT-CAC--TCAT---CCGAT-GAATCACAggaata
gi|24 : ctaACCTTCTGCA--ACCT-T-TCT--A--CTAAGC-TTATTTCAGAA-TTTTCAAATG------TT--AT-TGT-GG-TTAAA-TATCAACTTT-A---A-T-A--G-CACAATGAT-GAC--GC-TA--CACGTGCCATAGGGTGGT----CCACCTTATTCCAC---ATCTAATCTTATCA-CTACTT-CAATTAAATGT-CATAGT----CCT-TCTGGGT-C----CTCACC---------G------A-------T------GTAAC-CCGG--AGT--AAAC--AAG-CACTGTCATTTCTCG-T-GAATCACATgacgaacttaccagacccta
gi|27 : tag-TTT--A--CT--GC-TT----CA--A-TTTTAA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTCTCA---A-T-A-----ACAATGAT-AACACGC-TA--TA---------------T----CTCTCTT------T---AT----------CG-CTAC-T-CC--------T-GG--GT----CATACCCGAGT-G--------TC---------G------A-------T------GT-AC-CCGAA-AGC--AAAC--AAT-CAC-GCTATATTTCG-T-CAATCACATgacgagacttacagactccta
gi|28 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTAAA-T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA---------------GGGT-T--A-C---ACACGAGAATGG------A-------T------GT-AC-CCTGA-AGT--AAAC--AAG-CAT-GTTTTATCTCG-T-AAATCATATgacgaaacttacagacccta
gi|29 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTA---T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA--G--------------GTAC--A-C---AC---------G------AGAATGGAT------GT-AC-CCTGA-AGT--AAAC--AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttacagacccta
gi|3 : TAGTAATTTATGA----TTAGGTTGATGGAAT---GACA-AATTTTAG--C-TGAGC--ATTATAAAGACTGCAAAAAAATACGTTAC------TTTATAATA-----------AACTT---TGAT---------TC-ACA-TTGAAAAAAGT-TTG--TTGAT-CAGAT-GACA-TCTTTT-CACT-GTG-AAATAATTGAGTGTCA--A---CGAATCCA-AACTAGTT-AGTAAATCACAA-A-TGATG---TGTCTTTCGGGTGTTGTAGTCC-TTGAA-TCAGAT------GGTAATA--------TGAGGTG-AAGCGAACCATCA----T-GA-AT---CA----CATATTCTAAAATGG--AAAAT-GCA---TTTAATACA-ATATTTCA---ATAAAAC-CTACA-ACTATGATATACAACTGCTTTGATCATGAATAAGGATAATA---CAAC-TGCTTT-GATCAGGTGAATAAAGTA--TTAC-GC--------ATA-CATCACTTATTTTTGAAAGTAAATGTACAA-CTGTATTCAAAAACTGATG-CATGT-ATAGTTTAAGTGTAAAATAACCATTTATTAA--CACCTTTACTA-TTAAAACCCTGAAATAGTGCT-GCATTTCATTCATAAAATGTTATCATAATATTA-AATA----AGC---ATAGACT---------------CAATGCTGACCTTACCAAGAGCGAAATCCTTAACTTTTTTTAAATCTTCAAACAAGAATTT--AGGTAAAACTGGCA--ATGGT-CTGTTAC-ATTACAGATGCT-GTTAATTC-Cgacgagacttacagacccta
gi|30 : tgtatgctgaattcatccgaactcgacaattgtagcatagcaaagaagttgcaactggtgtgatcctgacaaagttatttaagtatatttgacaaatttctaaatgcataaacttaatatgtcccacttttgatactttcgaataaatccaaaattgaaaagagatgccacaacgttcattattaaaattggcacctattggtaggcaaataaagaatgcagaaatgtagacaaattccttcacattcttataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatatgatattcaaaacaaaatatttggaccagctttatgtgggcacatgtgaatatgctgctccccttctttgaaggagtttgcaagattcagcatcacatcaaagatcttaacacagtctacacatattcagtacatatctgaaaatctatacctattattttttggagaaagaagtaaatacatgttatactaaaataccatacatgtttgcatatttttttttttttatttattttattttgtttcatcaaatttaaatcaatcttattctgattgttttttacaaatctgcattacctaacaaaaatacaaaatcatttctctagcaaatgtatgcttatttaaatattttttgtaaagcttgacactatgtctatacatgtaaaggttcactgaaaactatgaaaagctgtcaaaaatatttattaatagccaacatgttcattacacagcttgaacatgttgcaagatgcaccagtagtaatatcacaataaagtacatgcatatttggatctgtgtttgTT-ACAGTTGCATTTTACTTCAGTTTT-ATTTGCCTCCTT-AGATCTGAAAAAAAA-TGCAATCTAT------CAATGTTACATGT-AGCAATAGC-ACTTGATC------TATT-TCTTTCTTTCT---T--TTTTTAAATAA-AAA-AA-TAAAT----GAAAA---g
gi|33 : AGATATGAC-ACCACCC-CCCCC------CCC---------GAACGT-GCC---TATGCGCCTATTA-ATACA-AAGCAT-GCC--TA-TGCAT-AAACCTTCTCTTGTTTTCAATT
gi|34 : ctttcaatgcatttgttcttgtaaaaatAAACG--TATTATATGCATGTA-CCTAG--CTCATTCATGTAGAT-A---AC-GTCTA-TA--T-C-GACCTTT-A-TTCCGC--ATTTCCT-C--GTGTA--G-ATTAATGGTTATATTACAC-G-CAATTCG-AC-AAA---
gi|35 : ACAATGAT-AAT--TC-TATACA---------------TGTAACTATCTT------T---AT----------CA-TTAC-T-CT--------T-GA--GTGACAC-T-CGCGAG--C--G-T---C----------G------A-------T------GT-AC-CCAAA-TGT--AAAT--AAT-CAC-GCCATATCTCG-T-AAATCA
gi|4 : acaatTAATTTATGA----TCAG-TTGATGGAATTT-GACAGAATTTTA---C-TGAGC--ATTATAAAGACTGCAA--AAAT-----AC------TTT----TACTTTATAATAAAACTT---TGAT---------TCCACA-TTGAAAAAAGT-TTG--TTGAT-CAGAAATACA-TCTTTTCC--T-GTGGAACTA--TGAGTGTCA--ACGAAGAGTCCATCACTAGTT-AGTAAATCA-AACGCTGA-G---TGTCTTTCGG-TGTTGT-GTCC-TTGAA-TCAGAT------GGTAATA--------TGAGGTGGAAGCGAACCATCC--C-TTGA-ATA--T-----CACATTCTAAA-TGGCAAAAG--GCAATTTT-AA-ACA-ATGTTTCA---ATAAAAC-CTACA--------CATA---------TGAT---------------TA---CAACATGCTTTTGATCAG-TGAATAAA-TA--TTACTGC--------ATA-CAT-ACTTATTTT-GAAA-TAA-TGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGCA-AATAAC-ATT-ATTAAAACACCTTTACTAGT-AAAACCT-TGAATAGTGCTTGCCATTCATTCATAAAA-GTTATCATAATATTATAATA----AGCTAGATAGA-T---------------CAAGTCTGA--TTACCAGAAGCTAAATCCTAAC-TTTTTTTAAATC-TCAA-CAATAATTTTCAGGTGAAACTGGCA---TGGGTCTGTTACA-TTGCAGATGCTT-TTAATTC-CTTCAT-GAGTTTTTGGGA-TGGCTGTGTCGACATAATGGATGTTT--G-TCCAATTTACAGTTGCATTTTACTTCAGTTTT-ACTTCCCTCCTTTA-ATCTGAAAAAAAAATTTAATCTATATTTATTAATATCAC--GTTAGCAATAGC-ACTTGATC------TATT-TAT-------TATTT--TTTTTTAAT-A-AAA-AAATAAATTTTTGAAAAATTTGTTGAACCCCTAATTTGGTTAACGCCTTCAGCATAGAACCGTACTATGTA-ACACTTGAAAG--AAAG---GTACT-TT-AAATGCATTT-GTTCATTGTG-GAA-T--AAATACGATTGTTGCACTCACT-GCACTGGAGGTATAGTTACCCCCC-CCCCCGCCCCCCCCCCCCCCTCTGAACG--GCC---TA---------TA-AAACACAATCATTGCCT-GA-TGCAT-AAACCT-GTCTTGTTTTCAATTAAGCCATAAATTG-AACTT-AATGATATGAA-AATACAGAAAA-CG--CATT-TG-GCATGTA-TCTAGGCCTAAT------TGAT-A---AC-GTCTAATA--CGC-AACCTATTA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGAT-GT--TAATACAC-G-AATTTCG-CC-AAA---GGG--TAG-CG-ATTCAACCTTATGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTTAATCTTG-G--TTAAA-T--C--CTTTGA---A-T-A--GTCACAATGATAAAC--GC-TA--CA--------------------CTATCTT------CATAAT----------CA-CTAC-T-CA----------CA--GT----C-C-CCTGGGT-C--A-C---CC---------G------A--------------GT-AC-CCGGATAAT--AACA--AAT-CAC-GTCATTTCTCG-T-GAATCACAT
gi|43 : agtacatgcatatttgatctgtgtttgtgc---------G------A-------T------GT-AC-CCTGA-AGT--AAAC--AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttaacagacctat
gi|48 : -AC-CCGAA-AGT--AAAATAAAT-CTC-GCTATATCTCG-TAAAATCACATgacgagacttacagaccctat
gi|5 : gaAATTTATAA----TCAG-TTG-TGGAATT--GACAGAATTTTA---C-TGAGC-CATTATAAAGACTGGC---AAA------AT------AAT----AA-----------AA--T---TGAT---------TC-ACACTTGAAAAA-GT-TTG--TTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G---T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TT-AATACA-ATATTGCA-A-GTAACAC-CTACA-A------TATA---------TGAT----------------A---CAAC-TGCTTT-GACCAG---AATAAAGTA--TTACTGC--------ATATCAT-ACTTATTTT-GAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGTATAATAAC-AT--ATTAA--AAC-TTTACTA-T-AAA--CC-TGAATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGAC-TTACCAAGAGCTAAATCCTAACTTTTTTTTCAATC-TCAAACAAT-ATTT---AGTGAAACTGGCACCATGG--CTGTTAC-ATTGCAGATGCTCGTTAATTCGCT-TCT-AT-TTTTTGGGATTGGCTGTGGCGACTT---GGATGTTTT-GTTCCAATT-ACAGTTGCTTTTTA-TTCAGTTTTTATCTCCCTCC-TTAGATCTGAAAAAAAAATTAAATCT-TATT-A-TAAT-TCAC-TGTTAG-AATA-C-ACTTGATC------TA-T-TAT-------T---TTGTTTTTAAAT-ATAAA-AA-TAAAT----G-AAA---TGT-GA----CTA--TTG--TA--G-C--CAGCATAGAATCCTACTATGTATACACT-GATAGG-AAAGTCTGTACTATTAAAATGCGTTTTGTTCATTGTGTGATAT--AAATATGATTGT-GCACT-ACT-GCACTGCA-GT-TAGT-A----CC-CCCCC------CCCTCCCCCTCTGAACGTGGCC---TAT--------TA-ACACA-AA-CAT-GCC--GATTGCAT-AAAACTTGTCTTGTTTTCAATTAAGCCCAAAATTGAAACTTTAATGATATGAG-A-ATCAGAAAAACG--CATTAT--GAATGTA-TCTAG--CTAGTTTTTA-AGAT-A---AC-GTCTA-------C-AACCTA--A-TTCCGC--ATTT-CT-C--GTGTAT-GCACTGATG----TATTACAC-GCCAATTCGCCC-AAA---GGGGTTAG-CG-ATT-AA-CTTCTGCA--ACTTAT-TCTTAA--CT--GCTTT----CA--ATTTTTCA--TGTT----TTT-ATCTGTGG--TTAAA-T--C--CTTT-AAAGA-T-A--G-CACAATGAT-AAC--GCTTA--CATT-------------T----CTATCTT------C---A-----------CA-CTA--T-CA--------TCCA--GT----C-T-CT--GGT-C--A-C---CC---------G------A-------T------GT--T-CCGGA-AGT--AAAC--AAT-CAC-GTCATTTCTCG-T-GAATCACAgacg
gi|6 : agtacatgcatattttggatctgtgtttgtgttaTATTACTTTTTGAATAGTCA--TTGATG----T--GACAGA--TTTA-----TGA----ATTATAAA----------AAA------AC------TTT----TA-----------AACTT----GAT---------TC-ACA-TTGAAAAA--T-TT---TTGAT-CAGAA-TACA-TCTTTTTCACT-GTG-A-CTAATTGAG-GTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCACAACTATGA-G---G-TCTTTCGGGTGTTGTAGTC--TTGAA-TCAGAT------GGTAATA--------TGAGGT--AAGCGAACCATCC--C-T-GA------T-----CACATTCTAAAATGG--AAAA--GCA---TT-AA-ACA-ATGTT---CA-ATAAAACGCT-CA-A------TAT-----------GAT---------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTA--TTACTGC--------ATG-CAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATGGCATGT-ATAGTT-AAGTGTA-AA-AAC-ATT-ATTAA--CACCTTTACTA-T-AAAACCT---AATAGTG-TTGCATTTCATTCATAAAA-GTTATCATAATATTATAATATTGAAGC---ATAGG-T---------------CAATGCT-AC-TTAC-AAAAGCTAAATCCTA--CTTTTTTTAAATC-TCAAACAATAATTT-CAGGTGAAACTGGCA--ATGT--CTGTTACAATTGCAGATGCT-GTTAATTC-CT-CAT-G--TTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TC-AATT-ACAGTTGCATTTTACTTCAGTTTT-ACTTCCCTCCT--AGATCTGAAAAAAAAATTAAATCTAT-TT-AT-AATATCAC-TGTTAGCAATAGC-ACTTGATC------TATT-TAT-------T---T--TTTTTAAAT-A-AAA-AA-TAAAT----GAAAA---TGT-GA----CTA--TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACACT-GATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTGT-GCACTCACT-GCACTGCAGGTATAGT-ACCCCCC-CCCCC------CCCCCCCCCTCTGAACGT-GCC---TA---------TA-ACACA-AATCAT-GCC--GA-TGCAT-AAACCTTG-CTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATGAG-A-TACAGAAAAACG--CATTAT--GCATGTA-TCTAG--CTAAT------AGAT-----AC-GTCTA-TA--C-C-AACCTAT-A-TTCCGC--ATTTCCT-C--GTGTAT-TCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAAG--GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-T---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAAC--AAT-CAC-GTCATTTCTCG-T-GAATCACATgacgagacttacagatt
22 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TAGACTGCCACTTCTTGCCAGTATAAACTGCTGCATGTTTCAAGAAGACCCTTACATGTTTTATTGTATAATCTTATAAAAAGTCTCACATGGCCTTGATGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAACTGAAATGCCTAGGATCCATGCCAAAGTGGGGGGGTATTGCCCCTGTAAATATTTATGTGGGTACTTTCACATGTTTTAAATTTTTTATTGAAGGGATCATGAAAACTTGGAGTGTCCAGCCAACTGAAATGCCTAGGATCCATGCCAAAGTCATTTGAAGAATTTACGATGGATACAACAAGTGACTAATTTAATGTCATTGTGATGATCAACTCTTGTATGCTGAATTCATCCGACTCGACAATTGTAGCATAGCAAAGAAGTTGCAACTGGTGCTGATCCTGACAAAGTATTTAGTATATTTGAAAATTTTCAAATGGCATAACACTTAATATTCCCCTTTTTAATACTTTCGAATAAATCCAAAATTGAAAAAGAGCATGCACAACTTCATTATGAATTGANNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGACAGAAGCTAGCAGATCGTGTCCTATTTGGATAGGCAAATAACAGAATGCATGAAATGTAGACATAGACATATTCCTTCACATTTCAATAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTAGATATCAAATTTATCAAAATATTCCAGCTTTATGTGGCACATGTGAATATGCTGCTCCCCTTTTGAAGGAGTTTGCAGATCAGCATCACATTGAATATACAGTTACACATATTCATGTACATTTCTTGAATCTATACATATTATTTTTGTAGAGAAAAAAGGTAAATACTAAATACCATATATGTTTGC
Unaligned ( gi|8 ): AGTACTGTAGTACTCAGTTTAGTTTCACTATTCGCTTTTACTACTGTTCCCGGGTACATCAACCAGTATGGAACTTGTCTGATCACACATTCATAATACTTTGCCCCTACTAAAATAAACGTATAGAATCGGTGGTACTCAATTACATTAATTTTGTGCATTTGTTTGTGAGCATCGATTGTCACCAAGCACCGGAAAAACACCTGTGCTCATCATAGATTGATTTGGACTCCTCCTTATTCGATGCTATAGTAGAGCCTAACCACTATAAGGAAAGTGGTGAAACAATACAAAGTAAAGTAGGTAGTACGTATCATTAATCGATAAATAACGAAGTGTAAATGTGATAATAATATTCTCCAAACTCCCATGAGTCAATCTGTTATTTCAGAGGGTTTGCTTAGATGTACAAAATTTTTTGCAGACAAACTCATAGAAAATAGAGAAAAGGAATTACAAGAATAATTCTCGAAACAACGAATTCCCCTAAAATGGTGGGGGAGGGGCGGGGTGTAGGGGGGGGGGTGTTTAAATGTTTTAAGAATGCGATAACTTTTTTCTACTTGTTATTTTTTGAATCAGAAAAAGAAGGCGGAGGTACCAACTAATCCGGTGATCATTATTATTATGGCAAGGGTGACTGGGGGGGGGAGGGACTTGTCGCCTTAACTGTCACTTCTTGCTAGTTAATATCACCTGCTACATATGTTTCAAAGAAGACTCGACATGTTGTGATTGTAGTAATCGATAAAAGTGGTATAAAAAGTCTCACATGGCCTTGATAGAGAATGAGTTGATTGTTATAATACATATTCCAATGGTTCATTGATAGTAATTTTAATATTGGGGGCTACAATTTAATTTGGGGGGGTAGGGAGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGAGGGGGGGGCAGAGAGGGGTGGGGTATATTGCGCCTGATAATATATTGTATAACATTGTGGGGGTATCCTTTCACAATGTTATAAAATTTATT
Unaligned ( gi|9 ): GATGTCAAATTGGACGAATGTAAAGTGACAGAATACATCTCCGATCTCGTAGTATCGTTATTACAGAGGGTTAGCAGATGTACAAAAAAAATTTGCAGACACACTATAGAAAAAAAAAAGAGTTAAAAGAATATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATCAGTTTTAAGATATTTTTTGCTATATAACTCCCTTCTGTCAGAAAAAGGCGAAGGTACAACTAATCCGGTGATCTAATTTTTATTATACCTATATATGGAAGAAGAATGCCCTTTGCTAGAGGGGGAACATTAGGCCTGCCACTTCTTGTCATTATAGTATTATTGTTATAATTCATAAAAAAAAGTATCCATGTACTTGATGAGAAATGAATATGATTATATAGATTTATCCTGTGTTGATTTTTGGAAGCTACAAGTTCAATTTTGTTGTTGAGGGGGAGGGGGTGTTAACATGCTCTGTAGAATCATATGTCTGGTGGTTACTTTTCACAATGTCCTATAAATGAGGAAACATGAAAACTAGTGTAGTGTCCCATCCCAACTGATCAAAATGCCCTAGGATGCCATGCTAAAGTCCCCATTTTAAAGAGTTTGCGCACATGGATAACAACAAAGTGAACTACATATAGCATTTCTGTGATGCATTTAAGTGAGTCTTGCGTTTTGTATTATAAATTGTATGCTGGATTCAACCGACTTGAAATATTGGTAGTATAAACAAAGAAGTTGGAAGCACTGGTTAGCTGATCCTGACAAAGTATTTTAGTATA
Unaligned ( gi|10 ): AAGTGTGTGTGTGGGGGTGGGGTGGGGGGTTGATACTACTCGCCCGTATATAAACTGCTTTATGTTTCGAGAGAATTCGTATACTTTTTAATGTTTAATCATGTAAGAACGTCTCATGGCCTTAATAAGAATGAATTGATTGTAAAAATCATTCTGTGATAAATACAATTGTTGAGGAGTACAAATATTCTTACAGACATCTATTCTGTAGGTACTTTTCACATATTTACAAAATTTTGTTTGAGTGGATGATGAAAACTGTAGGAGTGTCCAGTCCACTGAAATGCCAATTGAGGATCCATGCCACAGTCATTTGAAGAACTTGCATTTACTATGAAATATTGTAATGGACACAACAGAAGAGGCACTATGTCCAAATGGACATAAACGGCCAGTCCATGCCGTACAGTAATTACAAGGGTCGCCATTTAGAAAAGACTTTAATATGCGTTGTGCTAATGCAGCTCTTGTGTTTGGTTCCAAAGTGTATGCTGGATTCAACACGGACTTGGCAATTGTGGCAATAGAGAAGTTCAAGCTGGTGCTATGGTCCTGACATTAAAAGGATTTTACTAAGTATATTCAAGATAAACTTACAAATGGCATGCCGCTTTTGTCCAACACTTTCTTGCAAATAAAAGAGCATGCACAACTTTGCTACAAACTTTTCAGAAACAGAATACATGTACTCTGTTGGATAAGCAAACAATACAAAAATTTTATTTGAAATTCATATTCCATCAC
Unaligned ( gi|20 ): ATAATTTTATTTTATTTTTTTTTAGCCAAATTCCATTGGACACAGTACAGATATCAATCTATTAAAGAATCCGAGCTTTGTGTGGCCTATATAAATCTGCTTGCTCTCATTTTGAAAGAGATTGCAGACAAGCATGACATTGAAGATCTTACAAACTCAGTAGATTTTAAATTGCACATAGTCATACATTGTGCATGTATATCTCAAATCTGCACAAATTGGTCACTTCAAAATTCTATATATTATAAAAAAAATATTTCTTAAGTTAAAATAGTAAATACCAT
Unaligned ( gi|21 ): ATAGGGTCTGTAAGTCTCGTTTAGTTTCACGTTTCGCTTTCACTACTTCGCGGGTACATCAACGTATGGAAATTGTACTATTCACAACGTTGAATCGGTCCAATACATTAATTTTTGCTTGTTTGCAATTCGGAATGTAGCACACAAAGACCGGGAAAACCTTGCCTCATAGGTTTGATATTGGATTCCCTATCGATGCTAAGTAGGCCTAAACCTAAGGAAGCGGTAATACAAAGTAAAGTAGGTATCGATCATTAATCGATAACTAATGAATGTAAG
Unaligned ( gi|25 ): ATATGGTCTGTAAGTCTCGTTTAGTTTCACTTTCACTTTTACTACCTCCGGGTACATCAACGTATGGAACATATACTATCACAATGTTGAATTGGTCCCAATACATAATTTTGTGCGTTGTTTTGCAATCGGATGTACACAAAAGACAATGGGAAAACCCTGCCTCATAGTTGATTCGGATTCCCTATCGATGCTAACTATAAGGAAGATGTGAATACAAAGT
Unaligned ( gi|26 ): AGTACAATCATAATCGATGAATGATGTCGAATTGGACGAATGTAAAGTGACAGAATATATCTCCGAACTCGTAGTATCGTTATTTCAGAGTGTTAGCAGATGTACAAACATTTTTGCAGACAAACTATAGAAAGATTTTTTTTAAAAAGAATATTGACTAAGAATTTCCTAAATAAGGGGTGGGGGCGGGTCGGTTTTG
Unaligned ( gi|31 ): GTACATATCTTGAATCTATACATATTATTTCTGGAGAGAAAAAAAGGTAAATATAGTAAATACCATACATGTTTACATATATATTTTTTTATTATTTACAAATTTAAATCAATCTTATTCTGAT
Unaligned ( gi|32 ): TGTAAAGGTTCATTGAAAACTATGAAAAATTGTCAAAGATATTTATTAATAGACCACAAGTCATTGATTACACAACTTTGAACATGATGCGAGATGCACCAGTAATATCACAATAAAGTACA
Unaligned ( gi|36 ): GTATATTTAACAACCTTCCAAATGGCTTAACACTTAATAGCCCACCCTATCCTTTCTTACAATCAAATCCCACTTCACAAATGAGGAAGCACAACTTTGTTATAGAAAT
Unaligned ( gi|37 ): TTTGCAATCGGATGTACACACAAGACTTGGGAAACCCTACCTGATAATTAATTTGGATTGCCTATCGGTGCTAGGTATTCCTAAAGGAAGCGGTGAATACAAAGTTAA
Unaligned ( gi|38 ): TATTTATTTATCTTTATTTTTTTTTTTACAAATTAATCAATCTTATTCTGATTGTTTTTAATCTGCATTACCTAACAAAAATATCTAAAACCATTTTCTAGCAA
Unaligned ( gi|39 ): ATAGGGTATATAAGTCTCGACTTAGTTTCACCTTCACTTTTACTATTTCCGGGTACATCAACGGTATCAAAAATATGTATACTATTCCAAAACGTTGTAATC
Unaligned ( gi|40 ): ATTTTTATTATTTCTCTATATGGAAGAAAAATGCCCTTGCTAGAGAGAGAGAGAGAGGGGGGGGAGCTTGCACCTAGACTGCCACTTCTTGCTAGTATAAAC
Unaligned ( gi|41 ): TTGCAAACTGGTGCTAATCCTAACAGACAAGCAATTTAGTATATTTGACAAACTTTCAAATTGCATGACACTTAACATGTCACTCTTTCTTACAAATTC
Unaligned ( gi|42 ): AATATCGACAACGAATTCCCTAAATGGGGGAGGGGTTAAGTTTTAAGATACCATTTTTTTTCTGTATTTGTCAGAAAAAGGCGGAGGTACAACTAATC
Unaligned ( gi|44 ): GGGGGGGGGGGGGGGGGGGGGGCTGTTTTTGCCTTTAAAAACAAACTTTAATTTTCAT
Unaligned ( gi|45 ): GTAATGATTGCAAATTGTCTCTTAATCACATGACGAGACTTACAGACCCTATA
Unaligned ( gi|46 ): AAACAATCTCGCTATATCTCATCAATCATGTGACTAGGCTTACAGGCCCAAT
Unaligned ( gi|47 ): ATAGGGTCTGTAAGTCTCGTGTAGTTTCACTTTCGCTTTTACTACTTCCGG
Unaligned ( gi|49 ): AATAGGGTCTGTAAGTCTCGTTTAGTTT
Alignments
lowQualScore : 44444 11 333333333333 11 1111 7777777777777777777777777777777777777777777777777777777777777 1 1 1 333333 1 1 1111 1 1 1 333333 22222222 44444444444444444444 2222 111 11 222 77777777777777777777777777777777777777777777777777777777 11 22222222 1 1 1 1 111 1 1 111 1 1111 111 444444444444444 1 11 11 11 1 222 111 111 2222222 111111 11111 22222222222 111 11111 111 1111 11 111 111111 222222 111111111 22222222 111 11 1 22 222222 11111 111 2222 111 1 1111 222222 1 2 22222222222222222222 1111111111 44444444444444444444444444 11111111111111111111111111111111111111111
lowQualScore : 1 1 11111 1 4 00 222222222222 22 1 3333 7777777777777777777777777777777777777777777777777777777777777 3 88 8 4 66 8 99 3 5 5 6 6 333333 5 3 0 1 2 5 7777 4 8 5 3 5 222222 44444444 5 4 00000000000000000000 77 2222 000 5 00 5 7 222 66 5 22222222222222222222222222222222222222222222222222222222 5 6 44 99 44444444 5 6 6 6 3 7 6 3 88 3 3 6 777 99 0 3 9 000 3 9 1 0 4444 111 6 111111111111111 6 6 9 0 6 7 6 5 88 55 6 66 6 3 0 666 8 444 0 8 8 5 6 7 7 777 9 1 3333333 1 6 1 6 999999 33333 22222222222 555 5 77777 555 6 4444 55 99 99 3 99 6 6 3 111 3 1 6 6 7 7 6 99 6 999999 5 0 222222 666666666 66666666 000 5 5 6 5 33 5 5 0 6 6 3 77 55 5 66 666666 55555 5 5 0 7777 5 99 4 66 4 66 555 2222 4 4 4 4 666 66 5 5 0 66 4 4 55 55 55 3 0000 44 3 44 333333 3 0 77 3 44 44 0 555 6 3 8888 3 44 3 44 66666666666666666666 9999999999 6666666666 3 33333333333333333333333333 6 3 4 2 22222222222222222222222222222222222222222 2 2 2 33 33 2 5 5 3 2 2
lowQualScore : . . ..... . . .. ............ .. . .... ............................................................. . .. . . .. . .. . . . . . ...... . . . . . . .... . . . . . ...... ........ . . .................... .. .... ... . .. . . ... .. . ........................................................ . . .. .. ........ . . . . . . . . .. . . . ... .. . . . ... . . . . .... ... . ............... . . . . . . . . .. .. . .. . . . ... . ... . . . . . . . ... . . ....... . . . . ...... ..... ........... ... . ..... ... . .... .. .. .. . .. . . . ... . . . . . . . .. . ...... . . ...... ......... ........ ... . . . . .. . . . . . . .. .. . .. ...... ..... . . . .... . .. . .. . .. ... .... . . . . ... .. . . . .. . . .. .. .. . .... .. . .. ...... . . .. . .. .. . ... . . .... . .. . .. .................... .......... .......... . .......................... . . . . ......................................... . . . .. .. . . . . . .
lowQualScore : 0 9 44444 9 7 66 000000000000 22 1 6666 6666666666666666666666666666666666666666666666666666666666666 3 44 9 4 11 2 22 3 0 0 2 2 444444 0 1 0 6 5 0 8888 1 4 4 3 5 222222 22222222 7 3 66666666666666666666 99 3333 000 7 11 7 0 999 11 7 33333333333333333333333333333333333333333333333333333333 7 7 00 22 22222222 5 7 7 7 3 3 7 3 33 3 5 7 222 22 8 3 8 888 5 8 3 1 2222 777 7 777777777777777 7 7 8 6 7 3 7 0 33 88 7 00 7 2 0 222 0 888 8 0 0 0 7 3 3 888 8 0 8888888 7 7 0 7 222222 77777 00000000000 000 0 11111 777 7 2222 88 22 22 7 22 7 7 2 777 5 0 7 7 3 3 7 22 7 000000 7 7 111111 000000000 44444444 000 0 7 6 7 66 7 7 7 7 7 3 99 66 0 99 999999 99999 0 0 1 0000 0 22 4 11 4 11 777 4444 4 4 4 4 777 99 0 0 0 11 4 0 55 55 55 3 4444 66 3 66 888888 3 0 99 3 66 66 0 888 7 3 7777 1 22 1 22 88888888888888888888 2222222222 5555555555 1 77777777777777777777777777 2 1 5 9 11111111111111111111111111111111111111111 5 5 5 44 77 7 3 3 6 9 9
consensus : NNNNNNNNNNNNNNNNNTANTAATTTATGA-----TCAGTTGATGGAATT--GACAGAATTTTA---C-TGAGCC-ATTATA--AAGAC-TG-CAAAA----------CT---TT----TA-----------AAC---TT-T--GAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGATTCAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G--TGTCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TT-AATACA-ATATTTCAA--GTAAAAC-CTACA-A------TATAC----------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CA-TTATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-CTTC-ATG-GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATCTATA-TTATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TATTAACACA-AANCA-TGCC--GA-TGCAT-AAACCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
Reference ( family-506 ) : NNNNNNNNNNNNNNNNNTANTAATTTATGA-AT--TCAGTTGATGGAATT--GACAGAATTTTA---C-TGAGCC-ATTATA--AAGAC-TG-CAAAA----------CT---TT----TA-----------AAC---TT-T--GAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGATTCAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G--T-TCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TT-AATACA-ATATTTCAA--GTAAAAC-CTACA-A------TATAC----------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CA-TTATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-CTTC-AT--GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATCTATA-TTATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TATTAACACA-AANCA-TGCC--GA-TGCAT-AAACCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
gi|1 : AATTTATAA-----TCAGTTG-TGGAATT--GACAGAATTTTA---C-TGAGCC-ATTATA--AAGAC-TGGCAAAA----------TA---AT----AA-----------AA-----T-T--GAT---------TC-ACACTTGAAAAA-GT-TT--GTTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G--T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TT-AATACA-ATATTGCAA--GTAACAC-CTACA-A------TATAT----------------------GAT--------------A---CAAC-TGCTTT-GACCAG---AATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGT-ATAATAA-CA-T-ATT--AAAAC-TTTACTA-TAAA--CCTG-AATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTCAATC-TCAAACAAT-A-TTT--AGTGAAACTGGCACCATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-
gi|11 : aattatatctccaaactcatagtatctttatttcagagggtttgcagagtgtacaaaacttttgcagacaatttatagaaataagaaggaattcaaagaatatcgacaagcgcaattccctaaatggggggggggggggagggggggggttaattaagataacattttttttcttctgtatttgtcagaaagaaagcggaaggtcaactaaccgtgatcttattattagggggggggggggggggggggggggggcttgcgccttagactgtcactttcttgctagttataaactgctacatgtttcaagaagactcttacatgttgtattgtataatcgtataaaagagtgtaaaaagtaatcacatggcctttgagagaatgagttgattgtataaacctttatcctgtgtttcaattgaatttttttgggggctacatttaatttggggggggtatatgggcctgtaatattgtatatcatgtgaggtatgctgtcacatgtttataaaatttttattgaagggatcactgaattaattcggaagtgtcctagcacacgagatgttcctcacaagtcatgtaagaatttacggatggatctacaacaagtgactaatttaatgtcatttgtgatgcacttacattattttaaaagtgcaactcttgtgtgtattgctgagttcatccgactccgacaatttgtgagcatagcagaagtttcgcaaactgtgcgtcctgacaatcaataattatgtatatttgacaaacttttcaaatcggataacgcttaatatgtcccactttttactatcaactttcgataaaatccaaattttgaaaaaagagcatgcacaacttcatataaaaattggcattattaggattaggcaaataaaaagaatgcatgaaatgtagaacatattccttcacattctataaaaatttctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatacgatatcaaatcaaaatattctggaccagcttatgtggcacatgtgaaatatgctgtccccttttgacggtttggcagatccagcatcacattcgaagatttaacacagttgtaaacacatattcatgtcatatgcttgaatctatacatattatttttggagaaaaataggtaaaaatacttatactaaatacctacattgtttgcatatatttttttatttattttttttttttacaaatttaaatcaatctattcttagattgtttttaaattgcagttactaaacaaaaaatctacatccatttctctagcaaattgtatgttatttaaagattttttgtaatagtgaaactgaagaaaacttgtcaaacacatactcttagttatcaccatgtcattacgacgctgttcaacatgattgcaaggtgctcacgattacgtaatattacaaataaagtacatgcatattttggatctgtgtttgtgttaTGGGA-TGGCTGT-T--ACTTA--GGATGTTTTTG-TCCAA-TTACAGTTGCATTT-ACTTCAGTTTTTACTTCC-TCCTT-AG-TCTGAAAAAAAA-TTAAATCTATA-TTATTAATATCAC-TGTTAGCAATAGCGACTTGATT------TAT---TATAT-------TTATTTTTTAAAG-A-AAATAATAAA----TGAAAAA--TG-TGA----CTAC-TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCA-TGTG-GAAATAAAAATACGATT--TGCACTCACTCACACTGCAGGTATAT-AACCCCCCA-----CCCCCCCCCTCCCCGAAGAACGT--------GCCTTTTATTAACACA-AATCA-TGCC--GA-TCCATAAAACCTTGTC-TGTTTTCAATAAAGCCATAAATTG-AACTTTATAGATATG-AGAATCAAGAAAAACGGCCATTAT--GCATGTATTCTAA--CTAAT------AGAT-A---ACGGTCT-ATA--C-CAAACCTA-TATTTCCGC--ATTTCCTCC--GTGTATGGCACTGATG----TATTACACGG-CAATTCG-CC-AAA---GGG--TAG-CGAATTAAACCTTCTGCA--TCTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG-------TT-ATCTGT-G--GTTAA-T--C--CTTTAA---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------A----CTATCTT------C---ATC---------CA-CTAC-TGCA--------T-CA---T----C-T-CC-GGGT-C--A-C---CC---------G------A-------T------GT-A--CCGGA-AGT--AAA--CAAAT-CAC--TCATTTCTC
gi|12 : TTTATGA-----TCAGTTGATGAATTT--GACAGAATTTAA---C-T---CTTATTATATAAAGAC-----ATAA----------TT---TT------------------AC---TT-TATGAT------------AAA-T--AAAAA-GT-TT--GTTGAT-CAGA--TACA-TATTTTTCACT-GTA-AACTAATTGAGCGACAATG---AGAGT-CA-TA----TT-AGTAAATCGCAACACTGG-G--T-
gi|13 : tagatattaaaatattcaaagtctgtgtggtccatgtgtatacgctactccacttttgaagcagtttgcagatgaacatcacattgaagatcttattaactcagtatatttacatgctatcaggctatcagcatatattcatgtatatcttgaatctgccacttccaaactctacatattatttttgaagtcaatgttaaataccatacatgtttgcaatttttttttacaaatttaaatttcctacaatttttaaatctgcattacctaacaaaaatatctaaaatccgtttctttagcaaatgcatattatttaattatttttgcaaagctggacactatgtctatacatgttaaaagttcattcaaaactatgaaaaactgtcaaaaatatttattaatagcccacatgtcattacacaactttgaacatgttgcaagatgcaccagtaatatcacaattaagtacatgtatattcggatctgtgtttgtgATTTATTATAA--TCAGTTAATAGATTT--GAAAGGGTTTTA---CATG---C-ATTGTA--AATAC-TG-CGAAA----------CTACTCT----TA-------------C---TT-T--GATAAAATTCTATT-ACA-TGTAAAAT-GT-TT--GCTGAT-CAGAA-TCCA-TCTTTTTgtc
gi|14 : acatattccatcacagtatacatgtcaaactattcgaactttatgtggcctatgtgaatttgctactcattacagataattatgagaatgaagatcgtgcggactcagtagatcaattgtacctaaatgtatatcttgaatctgcccaaatttaacaatattgaacctctacatgttatttttaaagttaatagctataaatatcatacacgttacatatggtttttttttatttttaatcatttaagctttttgttctgattcagagtgttttcaaatatgcataaattacacaatatatttaaaatatatatctcgctagcatatgtatgttgtttaatgagttttgtttttggtaaagctggacactatggctatgcctatgcatctataggttaatcaaaaactatgtcaaaaatgtttattaatatttgtagcaacatgtaattacgtagcttcgaacatgttgaaagctgcatcattaatgtcataataaagtacatgtagttttgattctgtgtgtgtA-AATAAA-----AAAAA---TA-TGA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAC---GAATT-TT-CAATGCATTT-GTCC-TTGTA-AAAAT--AAATATGATTG-TGCACT----------GCAGGTAAAG-TACCCACC------CCCTCC--------TCTGAACGT--------GTC---TATTTACACA-AAGCA-TGTC--TA-TGGAT-ACACCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTG-GGAATACATAAATACG--TATTATATGCATGTA-TCTAG--CTCAT------AGATAA---AC-GTCT-ATA--C-C-AACCT--CA-TCCCGC--ATTTCCT-C--GTGTA---CACTGGTGGTTATATTACAC-G-CAATTCG-TCAAAA---GGG--TAG-CT-ATT-AACCTTCTTCG--ACTT-T-TCT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGTGG--TTAAA-T--C--CTCCAA---A-T-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------C---AT----------CA-TTA--------------------------C-T-CCTGGGT-CATA-C---CC---------GATTGTCA-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTTATATCTCG-T-AAGTCACAT
gi|15 : -AATAAA-----AAAAA---TA-TGA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAC---G-A-T-TT-CAATGCATTT-GTCC-TTGTA-AAAAT--AA-TATGATTG-TGCACT----------GCAGGTAAAG-TACCCACC------CCCTCCTT-----------ACGT--------GTC---TATTTACACA-AGAAG-TTCTAGGA-TAC------CCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTG-GG-ATAC-TAAATACG--TATTATA-GCATTTA-TCTAG--CTCAT------AGATAA---AC-GTCT-ATA--C-C-AACCT--CA-TCCCCG--ATTTCCT-C--GTGTA---CACTGGTGTTA-TATTACAC-G-CAATTCG-TC-AAA---AGG--TAG-CT-ATT-AACCTTCTTCG--ACTT-TCTTT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGT-GGTTTAAA-T--C--CTCA-A---A-TCA--A-CA-GAT-AT-AAC--GC-TA--TA---------------T----CTATC-T------C---AT----------CATCTA--------------------------C-T-CCTGGGT-CATA-C---CC---------G------A-------TTGTCTAGT-AC-CCGGA-AGT---AA--C-AAT-CACAGTTAT---TCG-T-AAGTCACATgacgagacttacagaccctatt
gi|16 : AAAATTATAATT----AGC---ATAGA-TAAACTCTTCATTTCACAATGTTGA-CTTACCAAGAGCTAAATCC-TAACTTGTTgacgagacttacagaccctat
gi|16 : ATC-TCAAACAATAA-TTTCAAGTGAAACTG-TA--ATGG--CC--TGC---TGCAG-------TTAATTC-CTTC-ATA-GTTGTTGGGA-TGGCTGTGTCGACTTG--GGATGTTTC-G-TCAAA-TTACAGTTGCATTTTACATCAG-TTTTACATGCCTCC-TTAGATCTGAAAAAAAAGACCAATTTA-------TAATATCAC-TATTAACAATAAC-ACTTGATCTTTTTATAT---A-TAT-------TT--TTTTTAAAT-C-AAA-Acgcatacctctttagttttcagtgttgtagctgaaaatgggcactttatctcaaacaataatttcaagtgaaactgtaatggcctgctgcagttaattccttcatagttgttgggatggctgtgtcgacttgggatgtttcgtcaaattacagttgcattttacatcagttttacatgcctccttagatctgaaaaaaaagaccaatttataatatcactattaacaataacacttgatctttttatatatattttttttaaatcaaaatcaa
gi|17 : aaaattataattagcatagataaactcttcatttcacaatgttgacttaccaagagctaaatcctaacttgttcgcatacctctttagttttcagtgttgtagctgaaaatgggcactttTTCAT-A-AT--TCAGTTGATGAAATT--GAAAGAATTTC----C-TGG--T-ATTATA--AATTT-TG-CAAAA----------AT---AT----TATGT--------AGTGTATG-T--GATAAAACTACACC-ACACTT---AAA-CT-TTGCGTTGACT-AGAA-TGCA-TCTTTGTAAAT-ATA-GACTACTTCAATGCCC--GCA-GGAGTACA-CAC----T-AGTAA------------A-G--C-TCTTTCCGGCGCGGTTGTCC-TTG-AATCTGATGTCAATAATCATACTGCGGTTTGA-GTG-AAGAAAGTCATCC--C-T-TACATACATGCAAACACATTCTAAAATGA--CAA-----A---TT-A--ACG-GCATTCC---------AT-CTACATA------TATAC----------------------TAT-------------TAAATCAAC-tcaa
gi|18 : CATGTA-TCTAG--CTAGT------AAAT-AGTTAC-GTCT-AGATTC-C-AACC-A-TA-TTCCAC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAAG--GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-CCT--A--CT--GC-TT----CA--A-TTTTCA--TA------TTT-ATCTGTGG--TTTGT-T--C--CTTTAA---A-T-A--A-CACAATGAT-AAT--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTA--------------------------C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAC-CCC-GCCATTTCTCG-T-GAATCACAT
gi|19 : cTTTATGA-----TCAGTTGATG-AATTTTGACAGAATCTTAACTC-T----T-ATTATATAAAGACAT----AAT----------CT---TT----TA-----------CGT---TTAT--GAT------------AAA-T--AAAAA-GTATT--GTTGATTCAGA--TACAGTATATTTCACTAGTA-AACTA-TTGAGCGACAATG---AGAGTC-------AATT-AGTAAATCGCAACACTGG-GGATGTCTTTTGGA-GTTGTTGTCgacgagacttacagaccct
gi|2 : ccaccatgtattacacaacacctgtgaacatgttgcaagatgcaccagtaatatcacaattagtacatttgtatatctcgattctgtgttttgtgT-C--A-CG--TT---------G------A-------T------GT-AC-CCGGA-AGT--A
gi|22 : atagggtctgtaagtctcgttagtttcactttcgcttttacG-AGGCAAACCATCC--CCT-GA-GT---------CACATTTTAAAACGG--CGAA---TG---TC-ATTACACGTATTTTATTTGTA------TACA--------TATAC----------------------GATATTATTTACTTTATA---TAAC-TGCTTT-GATCAG-TGGTGAAAGTATTTTACTACAAGTACAAATAT-AT-ACTTATTTT-GACA-TAGAT-T-CAG-CGGTATTCAAAACTTGATG-CAAGT-AAATTTTA--TG--A-AAAAA-AA-----T--AACA-GTTCACTG-TAAAGCCC-A-AGTAGTGCTGGCA-TTCATCCATAGA---CTATCAAAGT-TTACAAacttgtactatacaaacgttgaatggttccaaatacataattttgtgcatgtttttgcaatcggatgtacacacaagaccgggaaaaccctcctcatagttgatttggattccctatcgatgctaagtaggctaacccttaaggaagcggtgaatacaaagtaaagtaggtaagtacgatcataatcgataaataaaatgtaaagtgatattaaatatatctccgaactcatagtatctttatttcagaggtttgcagatgtacaaaatttttgcagacaaactatagaaataagaaaaggaattaaaagaatatcgacaacgaattccctaaatggggggggggggttaagttttttaagataacattttttttctgtatttgtcagaaaaaaggcggaggtacaactaatcgcggtgatcttattattaggaagggtgctggggggggggggtattgcgcctagactgtcacttcttgctacatgagtataaactagctacatgtttcaagaagactcttacatgttgtatgtattcgtataatgtataaaaagtctcatatggcttgatgagaatagttgatgtatacttcctgtgttcaattgattttttttggggcacaattaattttggggtggggagtgggggggggggggtatattgcgcctgtaaatattgtatacatgggtatctttcacatgtttaaaatttttattgagggatcatgaaacttggatgtccagcaactgaaatgccatgatccatgccaagtcatttgagaaatttacgatggatacaacaaagtgcctaatttaatgtcattatggatgcacttaattataagtgcaactcttggtggtatgctgaattcatccgactcgacaattgtagcatagcaaagaagttgcaaactggtgctgatcctgacaaagttttagtatttttgacaaatttcaatggcataacacttaatatgtcacttttaatactttcgaataaatccaaaattgaaaagacatgcacaacttcattataaattggcattttagtataggaaataaaagaatgcatgaatgtagacatattcttcacatttctataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcagtatagatatcaaaatcaatattctggacccagctttattggcacatgtgaatatgttgctcccttgaaggagtttcagatgcagcatcacattcaagatcttaacacagttacacatattctgtacatatcttgaatctatcatattatttttggagaaagaaggtaaatcatgtatactaaataccatacatgtttggcatattattttttttttatttctttatttattttatttttttagcactttttaaatcaatcttattctgattgttttttaaatctgcattactagacaaaaatatctaaaatccattctctagcaattatgttatttaaaggattttttgtaaagttgacactatgtctatacagtaaaaggttcacttgaaaactatgaaaaaactgtcaaaaaattatttattatagccacatgtcattacacagctttgaacatttgcaagatgcccattacgtaatat
gi|23 : TA-TA-TTCCGTCAATTTCCT-CTCGTGTAT--CACTGATG-T--TAT-ACAC-G-CATTTCG-CC-AAATGTAGG--TAGTCG-A----ACCT-CTGCATAACTT-T-TCT--ATACT--GC-TTT---CA--A-TTT-CA--TG------TTT-ATCTGT-G--GTAAAAT--C--CTTTTA---A-T-ATTG-CACAAT-AT-CAC--GC-AA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--ACC---CC---------A------A-------T------G--ACACCGGA-AGTAGAAA--C-AAT-CAC--TCATC---CGAT-GAATCACAggaata
gi|24 : ctaACCTTCTGCA--ACCT-T-TCT--A--CTAAGC-TTATTTCAGAA-TTTTCAAATG------TT--AT-TGT-GG-TTAAA-TATCAACTTT-A---A-T-A--G-CACAATGAT-GAC--GC-TA--CACGTGCCATAGGGTGGT----CCACCTTATTCCAC---ATCTAATCTTATCA-CTACTT-CAATTAAATGT-CATAGT----CCT-TCTGGGT-C----CTCACC---------G------A-------T------GTAAC-CCGG--AGT--AAA--C-AAG-CACTGTCATTTCTCG-T-GAATCACATgacgaacttaccagacccta
gi|27 : tag-TTT--A--CT--GC-TT----CA--A-TTTTAA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTCTCA---A-T-A-----ACAATGAT-AACACGC-TA--TA---------------T----CTCTCTT------T---AT----------CG-CTAC-T-CC--------T-GG--GT----CATACCCGAGT-G--------TC---------G------A-------T------GT-AC-CCGAA-AGC--AAA--C-AAT-CAC-GCTATATTTCG-T-CAATCACATgacgagacttacagactccta
gi|28 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTAAA-T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA---------------GGGT-T--A-C---ACACGAGAATGG------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAG-CAT-GTTTTATCTCG-T-AAATCATATgacgaaacttacagacccta
gi|29 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTA---T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA--G--------------GTAC--A-C---AC---------G------AGAATGGAT------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttacagacccta
gi|3 : TAGTAATTTATGA--T--TAGGTTGATGGAAT---GACA-AATTTTAG--C-TGAGC--ATTATA--AAGAC-TG-CAAAAAAATACGTTACT---TTATAATA-----------AAC---TT-T--GAT---------TC-ACA-TTGAAAAAAGT-TT--GTTGAT-CAGAT-GACA-TCTTTT-CACT-GTG-AAATAATTGAGTGTCA--A---CGAATCCA-AACTAGTT-AGTAAATCACAA-A-TGATG--TGTCTTTCGGGTGTTGTAGTCC-TTGAA-TCAGAT------GGTAATA--------TGAGGTG-AAGCGAACCATCA----T-GA-AT---CA----CATATTCTAAAATGG--AAAAT-GCA---TTTAATACA-ATATTTCAA---TAAAAC-CTACA-ACTATGATATACAACTGCTTTGATCATGAATAAGGATAA-----------TA---CAAC-TGCTTT-GATCAGGTGAATAAAGTATT--AC-GCA--------TA-CATCACTTATTTTTGAAAGTAAATGTACAA-CTGTATTCAAAAACTGATG-CATGT-ATAGTTTAAGTGTAA-AATAACCATTTATT--AACACCTTTACTATTAAAACCCTGAAATAGTGC-TGCATTTCATTCATAAAATGTTATCATAATATTA-AATA----AGC---ATAGACT---------------CAATGCTGACCTTACCAAGAGCGAAATCCTTAAC-TTTTTTTAAATCTTCAAACAAGAA-TTT-AGGTAAAACTGGCA--ATGGT-CTGTTACA-TTACAGATGCT-GTTAATTC-Cgacgagacttacagacccta
gi|30 : tgtatgctgaattcatccgaactcgacaattgtagcatagcaaagaagttgcaactggtgtgatcctgacaaagttatttaagtatatttgacaaatttctaaatgcataaacttaatatgtcccacttttgatactttcgaataaatccaaaattgaaaagagatgccacaacgttcattattaaaattggcacctattggtaggcaaataaagaatgcagaaatgtagacaaattccttcacattcttataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatatgatattcaaaacaaaatatttggaccagctttatgtgggcacatgtgaatatgctgctccccttctttgaaggagtttgcaagattcagcatcacatcaaagatcttaacacagtctacacatattcagtacatatctgaaaatctatacctattattttttggagaaagaagtaaatacatgttatactaaaataccatacatgtttgcatatttttttttttttatttattttattttgtttcatcaaatttaaatcaatcttattctgattgttttttacaaatctgcattacctaacaaaaatacaaaatcatttctctagcaaatgtatgcttatttaaatattttttgtaaagcttgacactatgtctatacatgtaaaggttcactgaaaactatgaaaagctgtcaaaaatatttattaatagccaacatgttcattacacagcttgaacatgttgcaagatgcaccagtagtaatatcacaataaagtacatgcatatttggatctgtgtttg-TTACAGTTGCATTTTACTTCAGTTTT-ATTTGCCTCCTT-AGATCTGAAAAAAAA-TGCAATCTAT------CAATGTTACATGT-AGCAATAGC-ACTTGATC------TAT---T-TCTTTCTTTCTT--TTTTTAAATAA-AAA-AATAAA----TGAAAA---g
gi|33 : AGATATGA-CACCACCC------C-CCCCCCC--------GAACGTGCCTATGCGCC---TATTAATACA-AAGCA-TGCC--TA-TGCAT-AAACCTTCTCTTGTTTTCAATT
gi|34 : ctttcaatgcatttgttcttgtaaaaatAAACG--TATTATATGCATGTA-CCTAG--CTCATTCATGTAGAT-A---AC-GTCT-ATA--T-C-GACCTT-TA-TTCCGC--ATTTCCT-C--GTGTA--G-ATTAATGGTTATATTACAC-G-CAATTCG-AC-AAA---
gi|35 : ACAATGAT-AAT--TC-TATACA---------------TGTAACTATCTT------T---AT----------CA-TTAC-T-CT--------T-GA--GTGACAC-T-CGCGAG--C--G-T---C----------G------A-------T------GT-AC-CCAAA-TGT--AAA--T-AAT-CAC-GCCATATCTCG-T-AAATCA
gi|4 : acaatTGCTAATTTATGA-----TCAGTTGATGGAATTT-GACAGAATTTTA---C-TGAGC--ATTATA--AAGAC-TG-CAAAAATA-------CT---TT----TACTTTATAATAAAAC---TT-T--GAT---------TCCACA-TTGAAAAAAGT-TT--GTTGAT-CAGAAATACA-TCTTTTCC--T-GTGGAACTA--TGAGTGTCA--ACGAAGAGTCCATCACTAGTT-AGTAAATCA-AACGCTGA-G--TGTCTTTCGG-TGTTGT-GTCC-TTGAA-TCAGAT------GGTAATA--------TGAGGTGGAAGCGAACCATCC--C-TTGA-ATA--T-----CACATTCTAAA-TGGCAAAAG--GCAATTTT-AA-ACA-ATGTTTCAA---TAAAAC-CTACA--------CATAT----------------------GAT-------------TA---CAACATGCTTTTGATCAG-TGAATAAA-TATT--ACTGCA--------TA-CAT-ACTTATTTT-GAAA-TAA-TGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGC-A-AATAA-CA-TTATTAAAACACCTTTACTAGTAAAACCTTG-AATAGTGCTTGCCATTCATTCATAAAA-GTTATCATAATATTATAATA----AGCTAGATAGA-T---------------CAAGTCTGA--TTACCAGAAGCTAAATCC-TAAC-TTTTTTTAAATC-TC-AACAATAATTTTCAGGTGAAACTGGC---ATGGGTCTGTTACA-TTGCAGATGCTT-TTAATTC-CTTC-ATGAGTTTTTGGGA-TGGCTGTGTCGACATAATGGATG-TTT-G-TCCAATTTACAGTTGCATTTTACTTCAG-TTTTACTTCCCTCCTTTA-ATCTGAAAAAAAAATTTAATCTATATTTATTAATATCAC--GTTAGCAATAGC-ACTTGATC------TATTTAT-TAT-------TT--TTTTTTAATAA-AAA-AATAAATTTTTGAAAAATTTGTTGAACCCCTAATTTGGTTAACGCCTTCAGCATAGAACCGTACTATGTA-ACACTTGAAAG--AAAG---GTACT-TT-AAATGCA-TTTGTTCATTGTG-G-AAT--AAATACGATTGTTGCACTCACT-GCACTGGAGGTATAGTTACCCCCCCCCCCGCCCCCCCCCCCCCCTCTGAACG---------GCC---TA-TAAAACACAATCATTGCCT-GA-TGCAT-AAACC-TGTCTTGTTTTCAATTAAGCCATAAATTG-AAC-TTAATGATATGAAA-ATACAG-AAAACG--CATT-TG-GCATGTA-TCTAGGCCTAAT------TGAT-A---AC-GTCTAATA--CGC-AACCTATTA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGAT-GT--TAATACAC-G-AATTTCG-CC-AAA---GGG--TAG-CG-ATTCAACCTTATGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTTAATCTTG-G--TTAAA-T--C--CTTTGA---A-T-A--GTCACAATGATAAAC--GC-TA--CA--------------------CTATCTT------CATAAT----------CA-CTAC-T-CA----------CA--GT----C-C-CCTGGGT-C--A-C---CC---------G------A--------------GT-AC-CCGGATAAT--AAC--A-AAT-CAC-GTCATTTCTCG-T-GAATCACAT
gi|43 : agtacatgcatatttgatctgtgtttg---------G------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttaacagacctat
gi|48 : -AC-CCGAA-AGT--AAAATA-AAT-CTC-GCTATATCTCG-TAAAATCACATgacgagacttacagaccctat
gi|5 : gaAATTTATAA-----TCAGTTG-TGGAATT--GACAGAATTTTA---C-TGAGCC-ATTATA--AAGAC-TGGCAAAA----------TA---AT----AA-----------AA-----T-T--GAT---------TC-ACACTTGAAAAA-GT-TT--GTTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G--T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TT-AATACA-ATATTGCAA--GTAACAC-CTACA-A------TATAT----------------------GAT--------------A---CAAC-TGCTTT-GACCAG---AATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGT-ATAATAA-CA-T-ATT--AAAAC-TTTACTA-TAAA--CCTG-AATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTCAATC-TCAAACAAT-A-TTT--AGTGAAACTGGCACCATGG--CTGTTACA-TTGCAGATGCTCGTTAATTCGCTTCTAT---TTTTTGGGATTGGCTGTGGCGACTT---GGATGTTTT-GTTCCAA-TTACAGTTGCTTTTTA-TTCAGTTTTTATCTCCCTCC-TTAGATCTGAAAAAAAAATTAAATCT-TA-TTA-TAAT-TCAC-TGTTAG-AATA-C-ACTTGATC------TA----T-TAT-------TTTGTTTTTAAAT-ATAAA-AATAAA----TG-AAA---TG-TGA----CTA--TTG--TA--G-C--CAGCATAGAATCCTACTATGTATACAC-TGATAGG-AAAGTCTGTACTATTAAAATGCGTTTTGTTCATTGTGTGATAT--AAATATGATTG-TGCACT-ACT-GCACTGCA-GT-TAG-TA----CC------CCCCCCCCTCCCCCTCTGAACGTG-------GCC---TATTAACACA-AA-CA-TGCC--GATTGCAT-AAAACTTGTCTTGTTTTCAATTAAGCCCAAAATTGAAACTTTAATGATATG-AG-AATCAGAAAAACG--CATTAT--GAATGTA-TCTAG--CTAGTTTTTA-AGAT-A---AC-GTCT-A------C-AACCTA--A-TTCCGC--ATTT-CT-C--GTGTAT-GCACTGATG----TATTACAC-GCCAATTCGCCC-AAA---GGGGTTAG-CG-ATT-AA-CTTCTGCA--ACTTAT-TCTTAA--CT--GCTTT----CA--ATTTTTCA--TGTT----TTT-ATCTGTGG--TTAAA-T--C--CTTT-AAAGA-T-A--G-CACAATGAT-AAC--GCTTA--CATT-------------T----CTATCTT------C---A-----------CA-CTA--T-CA--------TCCA--GT----C-T-CT--GGT-C--A-C---CC---------G------A-------T------GT--T-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACAgacg
gi|6 : agtacatgcatattttggatctgtgtttgtgttaTATTACTTTTTGA-ATAGTCA-TTGATG----T--GACAGA--TTTA-----TGA----ATTATA--AA--------AAAA----------CT---TT----TA-----------AAC---TT----GAT---------TC-ACA-TTGAAAAA--T-TT---TTGAT-CAGAA-TACA-TCTTTTTCACT-GTG-A-CTAATTGAG-GTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCACAACTATGA-G--G-TCTTTCGGGTGTTGTAGTC--TTGAA-TCAGAT------GGTAATA--------TGAGGT--AAGCGAACCATCC--C-T-GA------T-----CACATTCTAAAATGG--AAAA--GCA---TT-AA-ACA-ATGTT-CAA---TAAAACGCT-CA-A------TAT------------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TG-CAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATGGCATGT-ATAGTT-AAGTGT-A-AA-AA-CA-TTATT--AACACCTTTACTA-TAAAACCT---AATAGTG-TTGCATTTCATTCATAAAA-GTTATCATAATATTATAATATTGAAGC---ATAGG-T---------------CAATGCT-A-CTTAC-AAAAGCTAAATCC-TA--CTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGT--CTGTTACAATTGCAGATGCT-GTTAATTC-CT-C-AT--GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TC-AA-TTACAGTTGCATTTTACTTCAGTTTT-ACTTCCCTCCT--AGATCTGAAAAAAAAATTAAATCTAT--TTAT-AATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TA-TAACACA-AATCA-TGCC--GA-TGCAT-AAACCTTG-CTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTAT--GCATGTA-TCTAG--CTAAT------AGAT-----AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-TCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAAG--GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-T---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACATgacgagacttacagatt
22 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TAGACTGCCACTTCTTGCCAGTATAAACTGCTGCATGTTTCAAGAAGACCCTTACATGTTTTATTGTATAATCTTATAAAAAGTCTCACATGGCCTTGATGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAACTGAAATGCCTAGGATCCATGCCAAAGTGGGGGGGTATTGCCCCTGTAAATATTTATGTGGGTACTTTCACATGTTTTAAATTTTTTATTGAAGGGATCATGAAAACTTGGAGTGTCCAGCCAACTGAAATGCCTAGGATCCATGCCAAAGTCATTTGAAGAATTTACGATGGATACAACAAGTGACTAATTTAATGTCATTGTGATGATCAACTCTTGTATGCTGAATTCATCCGACTCGACAATTGTAGCATAGCAAAGAAGTTGCAACTGGTGCTGATCCTGACAAAGTATTTAGTATATTTGAAAATTTTCAAATGGCATAACACTTAATATTCCCCTTTTTAATACTTTCGAATAAATCCAAAATTGAAAAAGAGCATGCACAACTTCATTATGAATTGANNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGACAGAAGCTAGCAGATCGTGTCCTATTTGGATAGGCAAATAACAGAATGCATGAAATGTAGACATAGACATATTCCTTCACATTTCAATAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTAGATATCAAATTTATCAAAATATTCCAGCTTTATGTGGCACATGTGAATATGCTGCTCCCCTTTTGAAGGAGTTTGCAGATCAGCATCACATTGAATATACAGTTACACATATTCATGTACATTTCTTGAATCTATACATATTATTTTTGTAGAGAAAAAAGGTAAATACTAAATACCATATATGTTTGC
Unaligned ( gi|8 ): AGTACTGTAGTACTCAGTTTAGTTTCACTATTCGCTTTTACTACTGTTCCCGGGTACATCAACCAGTATGGAACTTGTCTGATCACACATTCATAATACTTTGCCCCTACTAAAATAAACGTATAGAATCGGTGGTACTCAATTACATTAATTTTGTGCATTTGTTTGTGAGCATCGATTGTCACCAAGCACCGGAAAAACACCTGTGCTCATCATAGATTGATTTGGACTCCTCCTTATTCGATGCTATAGTAGAGCCTAACCACTATAAGGAAAGTGGTGAAACAATACAAAGTAAAGTAGGTAGTACGTATCATTAATCGATAAATAACGAAGTGTAAATGTGATAATAATATTCTCCAAACTCCCATGAGTCAATCTGTTATTTCAGAGGGTTTGCTTAGATGTACAAAATTTTTTGCAGACAAACTCATAGAAAATAGAGAAAAGGAATTACAAGAATAATTCTCGAAACAACGAATTCCCCTAAAATGGTGGGGGAGGGGCGGGGTGTAGGGGGGGGGGTGTTTAAATGTTTTAAGAATGCGATAACTTTTTTCTACTTGTTATTTTTTGAATCAGAAAAAGAAGGCGGAGGTACCAACTAATCCGGTGATCATTATTATTATGGCAAGGGTGACTGGGGGGGGGAGGGACTTGTCGCCTTAACTGTCACTTCTTGCTAGTTAATATCACCTGCTACATATGTTTCAAAGAAGACTCGACATGTTGTGATTGTAGTAATCGATAAAAGTGGTATAAAAAGTCTCACATGGCCTTGATAGAGAATGAGTTGATTGTTATAATACATATTCCAATGGTTCATTGATAGTAATTTTAATATTGGGGGCTACAATTTAATTTGGGGGGGTAGGGAGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGAGGGGGGGGCAGAGAGGGGTGGGGTATATTGCGCCTGATAATATATTGTATAACATTGTGGGGGTATCCTTTCACAATGTTATAAAATTTATT
Unaligned ( gi|9 ): GATGTCAAATTGGACGAATGTAAAGTGACAGAATACATCTCCGATCTCGTAGTATCGTTATTACAGAGGGTTAGCAGATGTACAAAAAAAATTTGCAGACACACTATAGAAAAAAAAAAGAGTTAAAAGAATATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATCAGTTTTAAGATATTTTTTGCTATATAACTCCCTTCTGTCAGAAAAAGGCGAAGGTACAACTAATCCGGTGATCTAATTTTTATTATACCTATATATGGAAGAAGAATGCCCTTTGCTAGAGGGGGAACATTAGGCCTGCCACTTCTTGTCATTATAGTATTATTGTTATAATTCATAAAAAAAAGTATCCATGTACTTGATGAGAAATGAATATGATTATATAGATTTATCCTGTGTTGATTTTTGGAAGCTACAAGTTCAATTTTGTTGTTGAGGGGGAGGGGGTGTTAACATGCTCTGTAGAATCATATGTCTGGTGGTTACTTTTCACAATGTCCTATAAATGAGGAAACATGAAAACTAGTGTAGTGTCCCATCCCAACTGATCAAAATGCCCTAGGATGCCATGCTAAAGTCCCCATTTTAAAGAGTTTGCGCACATGGATAACAACAAAGTGAACTACATATAGCATTTCTGTGATGCATTTAAGTGAGTCTTGCGTTTTGTATTATAAATTGTATGCTGGATTCAACCGACTTGAAATATTGGTAGTATAAACAAAGAAGTTGGAAGCACTGGTTAGCTGATCCTGACAAAGTATTTTAGTATA
Unaligned ( gi|10 ): AAGTGTGTGTGTGGGGGTGGGGTGGGGGGTTGATACTACTCGCCCGTATATAAACTGCTTTATGTTTCGAGAGAATTCGTATACTTTTTAATGTTTAATCATGTAAGAACGTCTCATGGCCTTAATAAGAATGAATTGATTGTAAAAATCATTCTGTGATAAATACAATTGTTGAGGAGTACAAATATTCTTACAGACATCTATTCTGTAGGTACTTTTCACATATTTACAAAATTTTGTTTGAGTGGATGATGAAAACTGTAGGAGTGTCCAGTCCACTGAAATGCCAATTGAGGATCCATGCCACAGTCATTTGAAGAACTTGCATTTACTATGAAATATTGTAATGGACACAACAGAAGAGGCACTATGTCCAAATGGACATAAACGGCCAGTCCATGCCGTACAGTAATTACAAGGGTCGCCATTTAGAAAAGACTTTAATATGCGTTGTGCTAATGCAGCTCTTGTGTTTGGTTCCAAAGTGTATGCTGGATTCAACACGGACTTGGCAATTGTGGCAATAGAGAAGTTCAAGCTGGTGCTATGGTCCTGACATTAAAAGGATTTTACTAAGTATATTCAAGATAAACTTACAAATGGCATGCCGCTTTTGTCCAACACTTTCTTGCAAATAAAAGAGCATGCACAACTTTGCTACAAACTTTTCAGAAACAGAATACATGTACTCTGTTGGATAAGCAAACAATACAAAAATTTTATTTGAAATTCATATTCCATCAC
Unaligned ( gi|20 ): ATAATTTTATTTTATTTTTTTTTAGCCAAATTCCATTGGACACAGTACAGATATCAATCTATTAAAGAATCCGAGCTTTGTGTGGCCTATATAAATCTGCTTGCTCTCATTTTGAAAGAGATTGCAGACAAGCATGACATTGAAGATCTTACAAACTCAGTAGATTTTAAATTGCACATAGTCATACATTGTGCATGTATATCTCAAATCTGCACAAATTGGTCACTTCAAAATTCTATATATTATAAAAAAAATATTTCTTAAGTTAAAATAGTAAATACCAT
Unaligned ( gi|21 ): ATAGGGTCTGTAAGTCTCGTTTAGTTTCACGTTTCGCTTTCACTACTTCGCGGGTACATCAACGTATGGAAATTGTACTATTCACAACGTTGAATCGGTCCAATACATTAATTTTTGCTTGTTTGCAATTCGGAATGTAGCACACAAAGACCGGGAAAACCTTGCCTCATAGGTTTGATATTGGATTCCCTATCGATGCTAAGTAGGCCTAAACCTAAGGAAGCGGTAATACAAAGTAAAGTAGGTATCGATCATTAATCGATAACTAATGAATGTAAG
Unaligned ( gi|25 ): ATATGGTCTGTAAGTCTCGTTTAGTTTCACTTTCACTTTTACTACCTCCGGGTACATCAACGTATGGAACATATACTATCACAATGTTGAATTGGTCCCAATACATAATTTTGTGCGTTGTTTTGCAATCGGATGTACACAAAAGACAATGGGAAAACCCTGCCTCATAGTTGATTCGGATTCCCTATCGATGCTAACTATAAGGAAGATGTGAATACAAAGT
Unaligned ( gi|26 ): AGTACAATCATAATCGATGAATGATGTCGAATTGGACGAATGTAAAGTGACAGAATATATCTCCGAACTCGTAGTATCGTTATTTCAGAGTGTTAGCAGATGTACAAACATTTTTGCAGACAAACTATAGAAAGATTTTTTTTAAAAAGAATATTGACTAAGAATTTCCTAAATAAGGGGTGGGGGCGGGTCGGTTTTG
Unaligned ( gi|31 ): GTACATATCTTGAATCTATACATATTATTTCTGGAGAGAAAAAAAGGTAAATATAGTAAATACCATACATGTTTACATATATATTTTTTTATTATTTACAAATTTAAATCAATCTTATTCTGAT
Unaligned ( gi|32 ): TGTAAAGGTTCATTGAAAACTATGAAAAATTGTCAAAGATATTTATTAATAGACCACAAGTCATTGATTACACAACTTTGAACATGATGCGAGATGCACCAGTAATATCACAATAAAGTACA
Unaligned ( gi|36 ): GTATATTTAACAACCTTCCAAATGGCTTAACACTTAATAGCCCACCCTATCCTTTCTTACAATCAAATCCCACTTCACAAATGAGGAAGCACAACTTTGTTATAGAAAT
Unaligned ( gi|37 ): TTTGCAATCGGATGTACACACAAGACTTGGGAAACCCTACCTGATAATTAATTTGGATTGCCTATCGGTGCTAGGTATTCCTAAAGGAAGCGGTGAATACAAAGTTAA
Unaligned ( gi|38 ): TATTTATTTATCTTTATTTTTTTTTTTACAAATTAATCAATCTTATTCTGATTGTTTTTAATCTGCATTACCTAACAAAAATATCTAAAACCATTTTCTAGCAA
Unaligned ( gi|39 ): ATAGGGTATATAAGTCTCGACTTAGTTTCACCTTCACTTTTACTATTTCCGGGTACATCAACGGTATCAAAAATATGTATACTATTCCAAAACGTTGTAATC
Unaligned ( gi|40 ): ATTTTTATTATTTCTCTATATGGAAGAAAAATGCCCTTGCTAGAGAGAGAGAGAGAGGGGGGGGAGCTTGCACCTAGACTGCCACTTCTTGCTAGTATAAAC
Unaligned ( gi|41 ): TTGCAAACTGGTGCTAATCCTAACAGACAAGCAATTTAGTATATTTGACAAACTTTCAAATTGCATGACACTTAACATGTCACTCTTTCTTACAAATTC
Unaligned ( gi|42 ): AATATCGACAACGAATTCCCTAAATGGGGGAGGGGTTAAGTTTTAAGATACCATTTTTTTTCTGTATTTGTCAGAAAAAGGCGGAGGTACAACTAATC
Unaligned ( gi|44 ): GGGGGGGGGGGGGGGGGGGGGGCTGTTTTTGCCTTTAAAAACAAACTTTAATTTTCAT
Unaligned ( gi|45 ): GTAATGATTGCAAATTGTCTCTTAATCACATGACGAGACTTACAGACCCTATA
Unaligned ( gi|46 ): AAACAATCTCGCTATATCTCATCAATCATGTGACTAGGCTTACAGGCCCAAT
Unaligned ( gi|47 ): ATAGGGTCTGTAAGTCTCGTGTAGTTTCACTTTCGCTTTTACTACTTCCGG
Unaligned ( gi|49 ): AATAGGGTCTGTAAGTCTCGTTTAGTTT
Alignments
lowQualScore : 11 333333333333 11111 7777777777777777777777777777777777777777777777777777777777777 1 11 1 333333 1 1111 1 1 1 333333 22222222 44444444444444444444 2222 111 11 222 77777777777777777777777777777777777777777777777777777777 11 22222222 1 1 1 1 111 1 1 111 1 1111 111 444444444444444 1 11 11 11 11 111 111 2222222 111111 11111 22222222222 111 11111 111 1111 11 111 111111 222222 111111111 22222222 111 11 1 22 222222 11111 111 2222 111 1 1111 222222 1 2 22222222222222222222 1111111111 44444444444444444444444444 11111111111111111111111111111111111111111
lowQualScore : 1 9999 4 4 1 4 00 222222222222 66 66 1 00000 1111111111111111111111111111111111111111111111111111111111111 3 88 8 4 66 00 4 3 5 5 6 6 333333 5 3 0 8 2 5 2222 4 8 5 3 5 222222 44444444 5 4 00000000000000000000 77 2222 000 5 00 5 7 222 66 5 22222222222222222222222222222222222222222222222222222222 5 6 44 99 44444444 5 6 6 6 3 7 6 3 88 3 3 6 777 99 0 3 9 000 3 9 1 0 4444 111 6 111111111111111 6 6 9 0 6 7 6 5 88 55 6 66 6 3 3 88 8 444 0 8 8 5 6 7 7 777 9 1 3333333 1 6 1 6 999999 33333 22222222222 555 5 77777 555 6 4444 55 99 99 3 99 6 6 3 111 3 1 6 6 7 7 6 99 6 999999 5 0 222222 666666666 66666666 000 5 5 6 5 33 5 5 0 6 6 3 77 55 5 66 666666 55555 5 5 0 7777 5 99 4 66 4 66 555 2222 4 4 4 4 666 66 5 5 0 66 4 4 55 55 55 3 0000 44 3 44 333333 3 0 77 3 44 44 0 555 6 3 8888 3 44 3 44 66666666666666666666 9999999999 6666666666 3 33333333333333333333333333 6 3 4 2 22222222222222222222222222222222222222222 2 2 2 33 33 2 5 5 3 2 2
lowQualScore : . .... . . . . .. ............ .. .. . ..... ............................................................. . .. . . .. .. . . . . . . ...... . . . . . . .... . . . . . ...... ........ . . .................... .. .... ... . .. . . ... .. . ........................................................ . . .. .. ........ . . . . . . . . .. . . . ... .. . . . ... . . . . .... ... . ............... . . . . . . . . .. .. . .. . . . .. . ... . . . . . . . ... . . ....... . . . . ...... ..... ........... ... . ..... ... . .... .. .. .. . .. . . . ... . . . . . . . .. . ...... . . ...... ......... ........ ... . . . . .. . . . . . . .. .. . .. ...... ..... . . . .... . .. . .. . .. ... .... . . . . ... .. . . . .. . . .. .. .. . .... .. . .. ...... . . .. . .. .. . ... . . .... . .. . .. .................... .......... .......... . .......................... . . . . ......................................... . . . .. .. . . . . . .
lowQualScore : 0 4444 4 4 9 7 66 000000000000 11 11 1 99999 4444444444444444444444444444444444444444444444444444444444444 3 44 9 4 11 99 4 3 0 0 2 2 444444 0 1 0 5 5 0 6666 1 4 4 3 5 222222 22222222 7 3 66666666666666666666 99 3333 000 7 11 7 0 999 11 7 33333333333333333333333333333333333333333333333333333333 7 7 00 22 22222222 5 7 7 7 3 3 7 3 33 3 5 7 222 22 8 3 8 888 5 8 3 1 2222 777 7 777777777777777 7 7 8 6 7 3 7 0 33 88 7 00 7 2 2 88 0 888 8 0 0 0 7 3 3 888 8 0 8888888 7 7 0 7 222222 77777 00000000000 000 0 11111 777 7 2222 88 22 22 7 22 7 7 2 777 5 0 7 7 3 3 7 22 7 000000 7 7 111111 000000000 44444444 000 0 7 6 7 66 7 7 7 7 7 3 99 66 0 99 999999 99999 0 0 1 0000 0 22 4 11 4 11 777 4444 4 4 4 4 777 99 0 0 0 11 4 0 55 55 55 3 4444 66 3 66 888888 3 0 99 3 66 66 0 888 7 3 7777 1 22 1 22 88888888888888888888 2222222222 5555555555 1 77777777777777777777777777 2 1 5 9 11111111111111111111111111111111111111111 5 5 5 44 77 7 3 3 6 9 9
consensus : NNNNNNNNNNNNNNNNNTANTAATTTATGA----T-CAG-TTGATGGAATT--GACAGAATTTTA---C-TGAGC-CAT--TATA--AAGAC-TG-CAAA---A----------CTTT----TA-----------AAC---TT--TGAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGATTCAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G--TGTCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TT-AATACA-ATATTTCAA--GTAAAAC-CTACA-A------TATAC----------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CA-TTATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-CTTCATG-GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATCTATA-TTATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TATTAACACA-AANCA-TGCC--GA-TGCAT-AAACCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
Reference ( family-506 ) : NNNNNNNNNNNNNNNNNTANTAATTTATGA----T-CAG-TTGATGGAATT--GACAGAATTTTA---C-TGAGC-CAT--TATA--AAGAC-TG-CAAA---A----------CTTT----TA-----------AAC---TT--TGAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGATTCAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G--TGTCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TT-AATACA-ATATTTCAA--GTAAAAC-CTACA-A------TATAC----------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CA-TTATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-CTTCATG-GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATCTATA-TTATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TATTAACACA-AANCA-TGCC--GA-TGCAT-AAACCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
gi|1 : AATTTATAA----T-CAG-TTG-TGGAATT--GACAGAATTTTA---C-TGAGC-CAT--TATA--AAGAC-TGGCAAA---A----------TAAT----AA-----------AA-----T--TGAT---------TC-ACACTTGAAAAA-GT-TT--GTTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G--T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TT-AATACA-ATATTGCAA--GTAACAC-CTACA-A------TATAT----------------------GAT--------------A---CAAC-TGCTTT-GACCAG---AATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGT-ATAATAA-CA-T-ATT--AAAAC-TTTACTA-TAAA--CCTG-AATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTCAATC-TCAAACAAT-A-TTT--AGTGAAACTGGCACCATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-
gi|11 : aattatatctccaaactcatagtatctttatttcagagggtttgcagagtgtacaaaacttttgcagacaatttatagaaataagaaggaattcaaagaatatcgacaagcgcaattccctaaatggggggggggggggagggggggggttaattaagataacattttttttcttctgtatttgtcagaaagaaagcggaaggtcaactaaccgtgatcttattattagggggggggggggggggggggggggggcttgcgccttagactgtcactttcttgctagttataaactgctacatgtttcaagaagactcttacatgttgtattgtataatcgtataaaagagtgtaaaaagtaatcacatggcctttgagagaatgagttgattgtataaacctttatcctgtgtttcaattgaatttttttgggggctacatttaatttggggggggtatatgggcctgtaatattgtatatcatgtgaggtatgctgtcacatgtttataaaatttttattgaagggatcactgaattaattcggaagtgtcctagcacacgagatgttcctcacaagtcatgtaagaatttacggatggatctacaacaagtgactaatttaatgtcatttgtgatgcacttacattattttaaaagtgcaactcttgtgtgtattgctgagttcatccgactccgacaatttgtgagcatagcagaagtttcgcaaactgtgcgtcctgacaatcaataattatgtatatttgacaaacttttcaaatcggataacgcttaatatgtcccactttttactatcaactttcgataaaatccaaattttgaaaaaagagcatgcacaacttcatataaaaattggcattattaggattaggcaaataaaaagaatgcatgaaatgtagaacatattccttcacattctataaaaatttctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatacgatatcaaatcaaaatattctggaccagcttatgtggcacatgtgaaatatgctgtccccttttgacggtttggcagatccagcatcacattcgaagatttaacacagttgtaaacacatattcatgtcatatgcttgaatctatacatattatttttggagaaaaataggtaaaaatacttatactaaatacctacattgtttgcatatatttttttatttattttttttttttacaaatttaaatcaatctattcttagattgtttttaaattgcagttactaaacaaaaaatctacatccatttctctagcaaattgtatgttatttaaagattttttgtaatagtgaaactgaagaaaacttgtcaaacacatactcttagttatcaccatgtcattacgacgctgttcaacatgattgcaaggtgctcacgattacgtaatattacaaataaagtacatgcatattttggatctgtgtttgtgttaTGGGA-TGGCTGT-T--ACTTA--GGATGTTTTTG-TCCAA-TTACAGTTGCATTT-ACTTCAGTTTTTACTTCC-TCCTT-AG-TCTGAAAAAAAA-TTAAATCTATA-TTATTAATATCAC-TGTTAGCAATAGCGACTTGATT------TAT---TATAT-------TTATTTTTTAAAG-A-AAATAATAAA----TGAAAAA--TG-TGA----CTAC-TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCA-TGTG-GAAATAAAAATACGATT--TGCACTCACTCACACTGCAGGTATAT-AACCCCCCA-----CCCCCCCCCTCCCCGAAGAACGT--------GCCTTTTATTAACACA-AATCA-TGCC--GA-TCCATAAAACCTTGTC-TGTTTTCAATAAAGCCATAAATTG-AACTTTATAGATATG-AGAATCAAGAAAAACGGCCATTAT--GCATGTATTCTAA--CTAAT------AGAT-A---ACGGTCT-ATA--C-CAAACCTA-TATTTCCGC--ATTTCCTCC--GTGTATGGCACTGATG----TATTACACGG-CAATTCG-CC-AAA---GGG--TAG-CGAATTAAACCTTCTGCA--TCTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG-------TT-ATCTGT-G--GTTAA-T--C--CTTTAA---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------A----CTATCTT------C---ATC---------CA-CTAC-TGCA--------T-CA---T----C-T-CC-GGGT-C--A-C---CC---------G------A-------T------GT-A--CCGGA-AGT--AAA--CAAAT-CAC--TCATTTCTC
gi|12 : TTTATGA----T-CAG-TTGATGAATTT--GACAGAATTTAA---C-T---CTTATTATATA--AAGA-----CATA---A----------TTTT------------------AC---TTTATGAT------------AAA-T--AAAAA-GT-TT--GTTGA-TCAG-A-TACA-TATTTTTCACT-GTA-AACTAATTGAGCGACAATG---AGAGT-CA-TA----TT-AGTAAATCGCAACACTGG-G--TGTC
gi|13 : tagatattaaaatattcaaagtctgtgtggtccatgtgtatacgctactccacttttgaagcagtttgcagatgaacatcacattgaagatcttattaactcagtatatttacatgctatcaggctatcagcatatattcatgtatatcttgaatctgccacttccaaactctacatattatttttgaagtcaatgttaaataccatacatgtttgcaatttttttttacaaatttaaatttcctacaatttttaaatctgcattacctaacaaaaatatctaaaatccgtttctttagcaaatgcatattatttaattatttttgcaaagctggacactatgtctatacatgttaaaagttcattcaaaactatgaaaaactgtcaaaaatatttattaatagcccacatgtcattacacaactttgaacatgttgcaagatgcaccagtaatatcacaattaagtacatgtatattcggatctgtgtttgtgTTATAA----T-CAG-TTAATAGATTT--GAAAGGGTTTTA---CATG----CAT--TGTA--AATAC-TG-CGAAACTA----------CTCT----T-------------AC---TT--TGATAAAATTCTATT-ACA-TGTAAAAT-GT-TT--GCTGA-TCAGAA-TCCA-TCTTTTT
gi|14 : acatattccatcacagtatacatgtcaaactattcgaactttatgtggcctatgtgaatttgctactcattacagataattatgagaatgaagatcgtgcggactcagtagatcaattgtacctaaatgtatatcttgaatctgcccaaatttaacaatattgaacctctacatgttatttttaaagttaatagctataaatatcatacacgttacatatggtttttttttatttttaatcatttaagctttttgttctgattcagagtgttttcaaatatgcataaattacacaatatatttaaaatatatatctcgctagcatatgtatgttgtttaatgagttttgtttttggtaaagctggacactatggctatgcctatgcatctataggttaatcaaaaactatgtcaaaaatgtttattaatatttgtagcaacatgtaattacgtagcttcgaacatgttgaaagctgcatcattaatgtcataataaagtacatgtagttttgattctgtgtgtgtatttaA-AATAAA-----AAAAA---TA-TGA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAC---GAATT-TT-CAATGCATTT-GTCC-TTGTA-AAAAT--AAATATGATTG-TGCACT----------GCAGGTAAAG-TACCCACC------CCCTCC--------TCTGAACGT--------GTC---TATTTACACA-AAGCA-TGTC--TA-TGGAT-ACACCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTG-GGAATACATAAATACG--TATTATATGCATGTA-TCTAG--CTCAT------AGATAA---AC-GTCT-ATA--C-C-AACCT--CA-TCCCGC--ATTTCCT-C--GTGTA---CACTGGTGGTTATATTACAC-G-CAATTCG-TCAAAA---GGG--TAG-CT-ATT-AACCTTCTTCG--ACTT-T-TCT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGTGG--TTAAA-T--C--CTCCAA---A-T-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------C---AT----------CA-TTA--------------------------C-T-CCTGGGT-CATA-C---CC---------GATTGTCA-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTTATATCTCG-T-AAGTCACAT
gi|15 : -AATAAA-----AAAAA---TA-TGA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAC---G-A-T-TT-CAATGCATTT-GTCC-TTGTA-AAAAT--AA-TATGATTG-TGCACT----------GCAGGTAAAG-TACCCACC------CCCTCCTT-----------ACGT--------GTC---TATTTACACA-AGAAG-TTCTAGGA-TAC------CCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTG-GG-ATAC-TAAATACG--TATTATA-GCATTTA-TCTAG--CTCAT------AGATAA---AC-GTCT-ATA--C-C-AACCT--CA-TCCCCG--ATTTCCT-C--GTGTA---CACTGGTGTTA-TATTACAC-G-CAATTCG-TC-AAA---AGG--TAG-CT-ATT-AACCTTCTTCG--ACTT-TCTTT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGT-GGTTTAAA-T--C--CTCA-A---A-TCA--A-CA-GAT-AT-AAC--GC-TA--TA---------------T----CTATC-T------C---AT----------CATCTA--------------------------C-T-CCTGGGT-CATA-C---CC---------G------A-------TTGTCTAGT-AC-CCGGA-AGT---AA--C-AAT-CACAGTTAT---TCG-T-AAGTCACATgacgagacttacagaccctatt
gi|16 : AAAATTATAATT----AGC---ATAGA-TAAACTCTTCATTTCACAATGTTGA-CTTACCAAGAGCTAAATCC-TAACTTGTTgacgagacttacagaccctat
gi|16 : ATC-TCAAACAATAA-TTTCAAGTGAAACTG-TA--ATGG--CC--TGC---TGCAG-------TTAATTC-CTTCATA-GTTGTTGGGA-TGGCTGTGTCGACTTG--GGATGTTTC-G-TCAAA-TTACAGTTGCATTTTACATCAG-TTTTACATGCCTCC-TTAGATCTGAAAAAAAAGACCAATTTA-------TAATATCAC-TATTAACAATAAC-ACTTGATCTTTTTATAT---A-TAT-------TT--TTTTTAAAT-C-AAA-Acgcatacctctttagttttcagtgttgtagctgaaaatgggcactttatctcaaacaataatttcaagtgaaactgtaatggcctgctgcagttaattccttcatagttgttgggatggctgtgtcgacttgggatgtttcgtcaaattacagttgcattttacatcagttttacatgcctccttagatctgaaaaaaaagaccaatttataatatcactattaacaataacacttgatctttttatatatattttttttaaatcaaaatcaa
gi|17 : aaaattataattagcatagataaactcttcatttcacaatgttgacttaccaagagctaaatcctaacttgttcgcatacctctttagttttcagtgttgtagctgaaaatgggcactttTTCATAA----TTCAG-TTGATGAAATT--GAAAGAATTTC----C-TGG---TAT--TATA--AATTT-TG-CAAA---A----------ATAT----TATGT--------AGTGTATG--TGATAAAACTACACC-ACACTT---AAA-CT-TTGCGTTGACT-AGAA-TGCA-TCTTTGTAAAT-ATA-GACTACTTCAATGCCC--GCA-GGAGTACA-CAC----T-AGTAAA--GC--------------TCTTTCCGGCGCGGTTGTCC-TTG-AATCTGATGTCAATAATCATACTGCGGTTTGA-GTG-AAGAAAGTCATCC--C-T-TACATACATGCAAACACATTCTAAAATGA--CAA-----A---TT-A--ACG-GCATTCC---------AT-CTACATA------TATAC----------------------TAT-------------TAAATCAAC-tcaa
gi|18 : CATGTA-TCTAG--CTAGT------AAAT-AGTTAC-GTCT-AGATTC-C-AACC-A-TA-TTCCAC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAAG--GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-CCT--A--CT--GC-TT----CA--A-TTTTCA--TA------TTT-ATCTGTGG--TTTGT-T--C--CTTTAA---A-T-A--A-CACAATGAT-AAT--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTA--------------------------C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAC-CCC-GCCATTTCTCG-T-GAATCACAT
gi|19 : cTTTATGA----T-CAG-TTGATG-AATTTTGACAGAATCTTAACTC-T-----TAT--TATATAAAGACAT----AA---T----------CTTT----TA-----------CGT---TTA-TGAT------------AAA-T--AAAAA-GTATT--GTTGATTCAGA--TACAGTATATTTCACTAGTA-AACTA-TTGAGCGACAATG---AGAGTC-------AATT-AGTAAATCGCAACACTGG-GGATGTCTTTTGGA-GTTGTTGTCgacgagacttacagaccct
gi|2 : ccaccatgtattacacaacacctgtgaacatgttgcaagatgcaccagtaatatcacaattagtacatttgtatatctcgattctgtgttttgtgT-C--A-CG--TT---------G------A-------T------GT-AC-CCGGA-AGT--A
gi|22 : atagggtctgtaagtctcgttagtttcactttcgcttttacG-AGGCAAACCATCC--CCT-GA-GT---------CACATTTTAAAACGG--CGAA---TG---TC-ATTACACGTATTTTATTTGTA------TACA--------TATAC----------------------GATATTATTTACTTTATA---TAAC-TGCTTT-GATCAG-TGGTGAAAGTATTTTACTACAAGTACAAATAT-AT-ACTTATTTT-GACA-TAGAT-T-CAG-CGGTATTCAAAACTTGATG-CAAGT-AAATTTTA--TG--A-AAAAA-AA-----T--AACA-GTTCACTG-TAAAGCCC-A-AGTAGTGCTGGCA-TTCATCCATAGA---CTATCAAAGT-TTACAAacttgtactatacaaacgttgaatggttccaaatacataattttgtgcatgtttttgcaatcggatgtacacacaagaccgggaaaaccctcctcatagttgatttggattccctatcgatgctaagtaggctaacccttaaggaagcggtgaatacaaagtaaagtaggtaagtacgatcataatcgataaataaaatgtaaagtgatattaaatatatctccgaactcatagtatctttatttcagaggtttgcagatgtacaaaatttttgcagacaaactatagaaataagaaaaggaattaaaagaatatcgacaacgaattccctaaatggggggggggggttaagttttttaagataacattttttttctgtatttgtcagaaaaaaggcggaggtacaactaatcgcggtgatcttattattaggaagggtgctggggggggggggtattgcgcctagactgtcacttcttgctacatgagtataaactagctacatgtttcaagaagactcttacatgttgtatgtattcgtataatgtataaaaagtctcatatggcttgatgagaatagttgatgtatacttcctgtgttcaattgattttttttggggcacaattaattttggggtggggagtgggggggggggggtatattgcgcctgtaaatattgtatacatgggtatctttcacatgtttaaaatttttattgagggatcatgaaacttggatgtccagcaactgaaatgccatgatccatgccaagtcatttgagaaatttacgatggatacaacaaagtgcctaatttaatgtcattatggatgcacttaattataagtgcaactcttggtggtatgctgaattcatccgactcgacaattgtagcatagcaaagaagttgcaaactggtgctgatcctgacaaagttttagtatttttgacaaatttcaatggcataacacttaatatgtcacttttaatactttcgaataaatccaaaattgaaaagacatgcacaacttcattataaattggcattttagtataggaaataaaagaatgcatgaatgtagacatattcttcacatttctataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcagtatagatatcaaaatcaatattctggacccagctttattggcacatgtgaatatgttgctcccttgaaggagtttcagatgcagcatcacattcaagatcttaacacagttacacatattctgtacatatcttgaatctatcatattatttttggagaaagaaggtaaatcatgtatactaaataccatacatgtttggcatattattttttttttatttctttatttattttatttttttagcactttttaaatcaatcttattctgattgttttttaaatctgcattactagacaaaaatatctaaaatccattctctagcaattatgttatttaaaggattttttgtaaagttgacactatgtctatacagtaaaaggttcacttgaaaactatgaaaaaactgtcaaaaaattatttattatagccacatgtcattacacagctttgaacatttgcaagatgcccattacgtaatat
gi|23 : TA-TA-TTCCGTCAATTTCCT-CTCGTGTAT--CACTGATG-T--TAT-ACAC-G-CATTTCG-CC-AAATGTAGG--TAGTCG-A----ACCT-CTGCATAACTT-T-TCT--ATACT--GC-TTT---CA--A-TTT-CA--TG------TTT-ATCTGT-G--GTAAAAT--C--CTTTTA---A-T-ATTG-CACAAT-AT-CAC--GC-AA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--ACC---CC---------A------A-------T------G--ACACCGGA-AGTAGAAA--C-AAT-CAC--TCATC---CGAT-GAATCACAggaata
gi|24 : ctaACCTTCTGCA--ACCT-T-TCT--A--CTAAGC-TTATTTCAGAA-TTTTCAAATG------TT--AT-TGT-GG-TTAAA-TATCAACTTT-A---A-T-A--G-CACAATGAT-GAC--GC-TA--CACGTGCCATAGGGTGGT----CCACCTTATTCCAC---ATCTAATCTTATCA-CTACTT-CAATTAAATGT-CATAGT----CCT-TCTGGGT-C----CTCACC---------G------A-------T------GTAAC-CCGG--AGT--AAA--C-AAG-CACTGTCATTTCTCG-T-GAATCACATgacgaacttaccagacccta
gi|27 : tag-TTT--A--CT--GC-TT----CA--A-TTTTAA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTCTCA---A-T-A-----ACAATGAT-AACACGC-TA--TA---------------T----CTCTCTT------T---AT----------CG-CTAC-T-CC--------T-GG--GT----CATACCCGAGT-G--------TC---------G------A-------T------GT-AC-CCGAA-AGC--AAA--C-AAT-CAC-GCTATATTTCG-T-CAATCACATgacgagacttacagactccta
gi|28 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTAAA-T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA---------------GGGT-T--A-C---ACACGAGAATGG------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAG-CAT-GTTTTATCTCG-T-AAATCATATgacgaaacttacagacccta
gi|29 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTA---T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA--G--------------GTAC--A-C---AC---------G------AGAATGGAT------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttacagacccta
gi|3 : TAGTAATTTATGA----T-TAGGTTGATGGAAT---GACA-AATTTTAG--C-TGAGC--AT--TATA--AAGAC-TG-CAAA---AAAATACGTTACTTTATAATA-----------AAC---TT--TGAT---------TC-ACA-TTGAAAAAAGT-TT--GTTGAT-CAGAT-GACA-TCTTTT-CACT-GTG-AAATAATTGAGTGTCA--A---CGAATCCA-AACTAGTT-AGTAAATCACAA-A-TGATG--TGTCTTTCGGGTGTTGTAGTCC-TTGAA-TCAGAT------GGTAATA--------TGAGGTG-AAGCGAACCATCA----T-GA-AT---CA----CATATTCTAAAATGG--AAAAT-GCA---TTTAATACA-ATATTTCAA---TAAAAC-CTACA-ACTATGATATACAACTGCTTTGATCATGAATAAGGATAA-----------TA---CAAC-TGCTTT-GATCAGGTGAATAAAGTATT--AC-GCA--------TA-CATCACTTATTTTTGAAAGTAAATGTACAA-CTGTATTCAAAAACTGATG-CATGT-ATAGTTTAAGTGTAA-AATAACCATTTATT--AACACCTTTACTATTAAAACCCTGAAATAGTGC-TGCATTTCATTCATAAAATGTTATCATAATATTA-AATA----AGC---ATAGACT---------------CAATGCTGACCTTACCAAGAGCGAAATCCTTAAC-TTTTTTTAAATCTTCAAACAAGAA-TTT-AGGTAAAACTGGCA--ATGGT-CTGTTACA-TTACAGATGCT-GTTAATTC-Cgacgagacttacagacccta
gi|30 : tgtatgctgaattcatccgaactcgacaattgtagcatagcaaagaagttgcaactggtgtgatcctgacaaagttatttaagtatatttgacaaatttctaaatgcataaacttaatatgtcccacttttgatactttcgaataaatccaaaattgaaaagagatgccacaacgttcattattaaaattggcacctattggtaggcaaataaagaatgcagaaatgtagacaaattccttcacattcttataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatatgatattcaaaacaaaatatttggaccagctttatgtgggcacatgtgaatatgctgctccccttctttgaaggagtttgcaagattcagcatcacatcaaagatcttaacacagtctacacatattcagtacatatctgaaaatctatacctattattttttggagaaagaagtaaatacatgttatactaaaataccatacatgtttgcatatttttttttttttatttattttattttgtttcatcaaatttaaatcaatcttattctgattgttttttacaaatctgcattacctaacaaaaatacaaaatcatttctctagcaaatgtatgcttatttaaatattttttgtaaagcttgacactatgtctatacatgtaaaggttcactgaaaactatgaaaagctgtcaaaaatatttattaatagccaacatgttcattacacagcttgaacatgttgcaagatgcaccagtagtaatatcacaataaagtacatgcatatttggatctgtgtttg-TTACAGTTGCATTTTACTTCAGTTTT-ATTTGCCTCCTT-AGATCTGAAAAAAAA-TGCAATCTAT------CAATGTTACATGT-AGCAATAGC-ACTTGATC------TAT---T-TCTTTCTTTCTT--TTTTTAAATAA-AAA-AATAAA----TGAAAA---g
gi|33 : AGATATGA-CACCACCC------C-CCCCCCC--------GAACGTGCCTATGCGCC---TATTAATACA-AAGCA-TGCC--TA-TGCAT-AAACCTTCTCTTGTTTTCAATT
gi|34 : ctttcaatgcatttgttcttgtaaaaatAAACG--TATTATATGCATGTA-CCTAG--CTCATTCATGTAGAT-A---AC-GTCT-ATA--T-C-GACCTT-TA-TTCCGC--ATTTCCT-C--GTGTA--G-ATTAATGGTTATATTACAC-G-CAATTCG-AC-AAA---
gi|35 : ACAATGAT-AAT--TC-TATACA---------------TGTAACTATCTT------T---AT----------CA-TTAC-T-CT--------T-GA--GTGACAC-T-CGCGAG--C--G-T---C----------G------A-------T------GT-AC-CCAAA-TGT--AAA--T-AAT-CAC-GCCATATCTCG-T-AAATCA
gi|4 : acaatTGCTAATTTATGA----T-CAG-TTGATGGAATTT-GACAGAATTTTA---C-TGAGC--AT--TATA--AAGAC-TG-CAAA---AATA-------CTTT----TACTTTATAATAAAAC---TT--TGAT---------TCCACA-TTGAAAAAAGT-TT--GTTGAT-CAGAAATACA-TCTTTTCC--T-GTGGAACTA--TGAGTGTCA--ACGAAGAGTCCATCACTAGTT-AGTAAATCA-AACGCTGA-G--TGTCTTTCGG-TGTTGT-GTCC-TTGAA-TCAGAT------GGTAATA--------TGAGGTGGAAGCGAACCATCC--C-TTGA-ATA--T-----CACATTCTAAA-TGGCAAAAG--GCAATTTT-AA-ACA-ATGTTTCAA---TAAAAC-CTACA--------CATAT----------------------GAT-------------TA---CAACATGCTTTTGATCAG-TGAATAAA-TATT--ACTGCA--------TA-CAT-ACTTATTTT-GAAA-TAA-TGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGC-A-AATAA-CA-TTATTAAAACACCTTTACTAGTAAAACCTTG-AATAGTGCTTGCCATTCATTCATAAAA-GTTATCATAATATTATAATA----AGCTAGATAGA-T---------------CAAGTCTGA--TTACCAGAAGCTAAATCC-TAAC-TTTTTTTAAATC-TC-AACAATAATTTTCAGGTGAAACTGGC---ATGGGTCTGTTACA-TTGCAGATGCTT-TTAATTC-CTTCATGAGTTTTTGGGA-TGGCTGTGTCGACATAATGGATG-TTT-G-TCCAATTTACAGTTGCATTTTACTTCAG-TTTTACTTCCCTCCTTTA-ATCTGAAAAAAAAATTTAATCTATATTTATTAATATCAC--GTTAGCAATAGC-ACTTGATC------TATTTAT-TAT-------TT--TTTTTTAATAA-AAA-AATAAATTTTTGAAAAATTTGTTGAACCCCTAATTTGGTTAACGCCTTCAGCATAGAACCGTACTATGTA-ACACTTGAAAG--AAAG---GTACT-TT-AAATGCA-TTTGTTCATTGTG-G-AAT--AAATACGATTGTTGCACTCACT-GCACTGGAGGTATAGTTACCCCCCCCCCCGCCCCCCCCCCCCCCTCTGAACG---------GCC---TA-TAAAACACAATCATTGCCT-GA-TGCAT-AAACC-TGTCTTGTTTTCAATTAAGCCATAAATTG-AAC-TTAATGATATGAAA-ATACAG-AAAACG--CATT-TG-GCATGTA-TCTAGGCCTAAT------TGAT-A---AC-GTCTAATA--CGC-AACCTATTA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGAT-GT--TAATACAC-G-AATTTCG-CC-AAA---GGG--TAG-CG-ATTCAACCTTATGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTTAATCTTG-G--TTAAA-T--C--CTTTGA---A-T-A--GTCACAATGATAAAC--GC-TA--CA--------------------CTATCTT------CATAAT----------CA-CTAC-T-CA----------CA--GT----C-C-CCTGGGT-C--A-C---CC---------G------A--------------GT-AC-CCGGATAAT--AAC--A-AAT-CAC-GTCATTTCTCG-T-GAATCACAT
gi|43 : agtacatgcatatttgatctgtgtttg---------G------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttaacagacctat
gi|48 : -AC-CCGAA-AGT--AAAATA-AAT-CTC-GCTATATCTCG-TAAAATCACATgacgagacttacagaccctat
gi|5 : gaAATTTATAA----T-CAG-TTG-TGGAATT--GACAGAATTTTA---C-TGAGC-CAT--TATA--AAGAC-TGGCAAA---A----------TAAT----AA-----------AA-----T--TGAT---------TC-ACACTTGAAAAA-GT-TT--GTTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G--T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TT-AATACA-ATATTGCAA--GTAACAC-CTACA-A------TATAT----------------------GAT--------------A---CAAC-TGCTTT-GACCAG---AATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGT-ATAATAA-CA-T-ATT--AAAAC-TTTACTA-TAAA--CCTG-AATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTCAATC-TCAAACAAT-A-TTT--AGTGAAACTGGCACCATGG--CTGTTACA-TTGCAGATGCTCGTTAATTCGCTTC-TA-TTTTTTGGGATTGGCTGTGGCGACTT---GGATGTTTT-GTTCCAA-TTACAGTTGCTTTTTA-TTCAGTTTTTATCTCCCTCC-TTAGATCTGAAAAAAAAATTAAATCT-TA-TTA-TAAT-TCAC-TGTTAG-AATA-C-ACTTGATC------TA----T-TAT-------TTTGTTTTTAAAT-ATAAA-AATAAA----TG-AAA---TG-TGA----CTA--TTG--TA--G-C--CAGCATAGAATCCTACTATGTATACAC-TGATAGG-AAAGTCTGTACTATTAAAATGCGTTTTGTTCATTGTGTGATAT--AAATATGATTG-TGCACT-ACT-GCACTGCA-GT-TAG-TA----CC------CCCCCCCCTCCCCCTCTGAACGTG-------GCC---TATTAACACA-AA-CA-TGCC--GATTGCAT-AAAACTTGTCTTGTTTTCAATTAAGCCCAAAATTGAAACTTTAATGATATG-AG-AATCAGAAAAACG--CATTAT--GAATGTA-TCTAG--CTAGTTTTTA-AGAT-A---AC-GTCT-A------C-AACCTA--A-TTCCGC--ATTT-CT-C--GTGTAT-GCACTGATG----TATTACAC-GCCAATTCGCCC-AAA---GGGGTTAG-CG-ATT-AA-CTTCTGCA--ACTTAT-TCTTAA--CT--GCTTT----CA--ATTTTTCA--TGTT----TTT-ATCTGTGG--TTAAA-T--C--CTTT-AAAGA-T-A--G-CACAATGAT-AAC--GCTTA--CATT-------------T----CTATCTT------C---A-----------CA-CTA--T-CA--------TCCA--GT----C-T-CT--GGT-C--A-C---CC---------G------A-------T------GT--T-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACAgacg
gi|6 : agtacatgcatattttggatctgtgtttgtgttaTATTACTTTTTGAATAGT-CA--TTGATG----T--GACAGA--TTTA-----TGA----AT--TATA--AA--------AAA---A----------CTTT----TA-----------AAC---TT---GAT---------TC-ACA-TTGAAAAA--T-TT---TTGAT-CAGAA-TACA-TCTTTTTCACT-GTG-A-CTAATTGAG-GTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCACAACTATGA-G---GTCTTTCGGGTGTTGTAGTC--TTGAA-TCAGAT------GGTAATA--------TGAGGT--AAGCGAACCATCC--C-T-GA------T-----CACATTCTAAAATGG--AAAA--GCA---TT-AA-ACA-ATGTT-CAA---TAAAACGCT-CA-A------TAT------------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TG-CAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATGGCATGT-ATAGTT-AAGTGT-A-AA-AA-CA-TTATT--AACACCTTTACTA-TAAAACCT---AATAGTG-TTGCATTTCATTCATAAAA-GTTATCATAATATTATAATATTGAAGC---ATAGG-T---------------CAATGCT-A-CTTAC-AAAAGCTAAATCC-TA--CTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGT--CTGTTACAATTGCAGATGCT-GTTAATTC-CT-CATG--TTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TC-AA-TTACAGTTGCATTTTACTTCAGTTTT-ACTTCCCTCCT--AGATCTGAAAAAAAAATTAAATCTAT--TTAT-AATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TA-TAACACA-AATCA-TGCC--GA-TGCAT-AAACCTTG-CTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTAT--GCATGTA-TCTAG--CTAAT------AGAT-----AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-TCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAAG--GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-T---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACATgacgagacttacagatt
22 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TAGACTGCCACTTCTTGCCAGTATAAACTGCTGCATGTTTCAAGAAGACCCTTACATGTTTTATTGTATAATCTTATAAAAAGTCTCACATGGCCTTGATGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAACTGAAATGCCTAGGATCCATGCCAAAGTGGGGGGGTATTGCCCCTGTAAATATTTATGTGGGTACTTTCACATGTTTTAAATTTTTTATTGAAGGGATCATGAAAACTTGGAGTGTCCAGCCAACTGAAATGCCTAGGATCCATGCCAAAGTCATTTGAAGAATTTACGATGGATACAACAAGTGACTAATTTAATGTCATTGTGATGATCAACTCTTGTATGCTGAATTCATCCGACTCGACAATTGTAGCATAGCAAAGAAGTTGCAACTGGTGCTGATCCTGACAAAGTATTTAGTATATTTGAAAATTTTCAAATGGCATAACACTTAATATTCCCCTTTTTAATACTTTCGAATAAATCCAAAATTGAAAAAGAGCATGCACAACTTCATTATGAATTGANNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGACAGAAGCTAGCAGATCGTGTCCTATTTGGATAGGCAAATAACAGAATGCATGAAATGTAGACATAGACATATTCCTTCACATTTCAATAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTAGATATCAAATTTATCAAAATATTCCAGCTTTATGTGGCACATGTGAATATGCTGCTCCCCTTTTGAAGGAGTTTGCAGATCAGCATCACATTGAATATACAGTTACACATATTCATGTACATTTCTTGAATCTATACATATTATTTTTGTAGAGAAAAAAGGTAAATACTAAATACCATATATGTTTGC
Unaligned ( gi|8 ): AGTACTGTAGTACTCAGTTTAGTTTCACTATTCGCTTTTACTACTGTTCCCGGGTACATCAACCAGTATGGAACTTGTCTGATCACACATTCATAATACTTTGCCCCTACTAAAATAAACGTATAGAATCGGTGGTACTCAATTACATTAATTTTGTGCATTTGTTTGTGAGCATCGATTGTCACCAAGCACCGGAAAAACACCTGTGCTCATCATAGATTGATTTGGACTCCTCCTTATTCGATGCTATAGTAGAGCCTAACCACTATAAGGAAAGTGGTGAAACAATACAAAGTAAAGTAGGTAGTACGTATCATTAATCGATAAATAACGAAGTGTAAATGTGATAATAATATTCTCCAAACTCCCATGAGTCAATCTGTTATTTCAGAGGGTTTGCTTAGATGTACAAAATTTTTTGCAGACAAACTCATAGAAAATAGAGAAAAGGAATTACAAGAATAATTCTCGAAACAACGAATTCCCCTAAAATGGTGGGGGAGGGGCGGGGTGTAGGGGGGGGGGTGTTTAAATGTTTTAAGAATGCGATAACTTTTTTCTACTTGTTATTTTTTGAATCAGAAAAAGAAGGCGGAGGTACCAACTAATCCGGTGATCATTATTATTATGGCAAGGGTGACTGGGGGGGGGAGGGACTTGTCGCCTTAACTGTCACTTCTTGCTAGTTAATATCACCTGCTACATATGTTTCAAAGAAGACTCGACATGTTGTGATTGTAGTAATCGATAAAAGTGGTATAAAAAGTCTCACATGGCCTTGATAGAGAATGAGTTGATTGTTATAATACATATTCCAATGGTTCATTGATAGTAATTTTAATATTGGGGGCTACAATTTAATTTGGGGGGGTAGGGAGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGAGGGGGGGGCAGAGAGGGGTGGGGTATATTGCGCCTGATAATATATTGTATAACATTGTGGGGGTATCCTTTCACAATGTTATAAAATTTATT
Unaligned ( gi|9 ): GATGTCAAATTGGACGAATGTAAAGTGACAGAATACATCTCCGATCTCGTAGTATCGTTATTACAGAGGGTTAGCAGATGTACAAAAAAAATTTGCAGACACACTATAGAAAAAAAAAAGAGTTAAAAGAATATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATCAGTTTTAAGATATTTTTTGCTATATAACTCCCTTCTGTCAGAAAAAGGCGAAGGTACAACTAATCCGGTGATCTAATTTTTATTATACCTATATATGGAAGAAGAATGCCCTTTGCTAGAGGGGGAACATTAGGCCTGCCACTTCTTGTCATTATAGTATTATTGTTATAATTCATAAAAAAAAGTATCCATGTACTTGATGAGAAATGAATATGATTATATAGATTTATCCTGTGTTGATTTTTGGAAGCTACAAGTTCAATTTTGTTGTTGAGGGGGAGGGGGTGTTAACATGCTCTGTAGAATCATATGTCTGGTGGTTACTTTTCACAATGTCCTATAAATGAGGAAACATGAAAACTAGTGTAGTGTCCCATCCCAACTGATCAAAATGCCCTAGGATGCCATGCTAAAGTCCCCATTTTAAAGAGTTTGCGCACATGGATAACAACAAAGTGAACTACATATAGCATTTCTGTGATGCATTTAAGTGAGTCTTGCGTTTTGTATTATAAATTGTATGCTGGATTCAACCGACTTGAAATATTGGTAGTATAAACAAAGAAGTTGGAAGCACTGGTTAGCTGATCCTGACAAAGTATTTTAGTATA
Unaligned ( gi|10 ): AAGTGTGTGTGTGGGGGTGGGGTGGGGGGTTGATACTACTCGCCCGTATATAAACTGCTTTATGTTTCGAGAGAATTCGTATACTTTTTAATGTTTAATCATGTAAGAACGTCTCATGGCCTTAATAAGAATGAATTGATTGTAAAAATCATTCTGTGATAAATACAATTGTTGAGGAGTACAAATATTCTTACAGACATCTATTCTGTAGGTACTTTTCACATATTTACAAAATTTTGTTTGAGTGGATGATGAAAACTGTAGGAGTGTCCAGTCCACTGAAATGCCAATTGAGGATCCATGCCACAGTCATTTGAAGAACTTGCATTTACTATGAAATATTGTAATGGACACAACAGAAGAGGCACTATGTCCAAATGGACATAAACGGCCAGTCCATGCCGTACAGTAATTACAAGGGTCGCCATTTAGAAAAGACTTTAATATGCGTTGTGCTAATGCAGCTCTTGTGTTTGGTTCCAAAGTGTATGCTGGATTCAACACGGACTTGGCAATTGTGGCAATAGAGAAGTTCAAGCTGGTGCTATGGTCCTGACATTAAAAGGATTTTACTAAGTATATTCAAGATAAACTTACAAATGGCATGCCGCTTTTGTCCAACACTTTCTTGCAAATAAAAGAGCATGCACAACTTTGCTACAAACTTTTCAGAAACAGAATACATGTACTCTGTTGGATAAGCAAACAATACAAAAATTTTATTTGAAATTCATATTCCATCAC
Unaligned ( gi|20 ): ATAATTTTATTTTATTTTTTTTTAGCCAAATTCCATTGGACACAGTACAGATATCAATCTATTAAAGAATCCGAGCTTTGTGTGGCCTATATAAATCTGCTTGCTCTCATTTTGAAAGAGATTGCAGACAAGCATGACATTGAAGATCTTACAAACTCAGTAGATTTTAAATTGCACATAGTCATACATTGTGCATGTATATCTCAAATCTGCACAAATTGGTCACTTCAAAATTCTATATATTATAAAAAAAATATTTCTTAAGTTAAAATAGTAAATACCAT
Unaligned ( gi|21 ): ATAGGGTCTGTAAGTCTCGTTTAGTTTCACGTTTCGCTTTCACTACTTCGCGGGTACATCAACGTATGGAAATTGTACTATTCACAACGTTGAATCGGTCCAATACATTAATTTTTGCTTGTTTGCAATTCGGAATGTAGCACACAAAGACCGGGAAAACCTTGCCTCATAGGTTTGATATTGGATTCCCTATCGATGCTAAGTAGGCCTAAACCTAAGGAAGCGGTAATACAAAGTAAAGTAGGTATCGATCATTAATCGATAACTAATGAATGTAAG
Unaligned ( gi|25 ): ATATGGTCTGTAAGTCTCGTTTAGTTTCACTTTCACTTTTACTACCTCCGGGTACATCAACGTATGGAACATATACTATCACAATGTTGAATTGGTCCCAATACATAATTTTGTGCGTTGTTTTGCAATCGGATGTACACAAAAGACAATGGGAAAACCCTGCCTCATAGTTGATTCGGATTCCCTATCGATGCTAACTATAAGGAAGATGTGAATACAAAGT
Unaligned ( gi|26 ): AGTACAATCATAATCGATGAATGATGTCGAATTGGACGAATGTAAAGTGACAGAATATATCTCCGAACTCGTAGTATCGTTATTTCAGAGTGTTAGCAGATGTACAAACATTTTTGCAGACAAACTATAGAAAGATTTTTTTTAAAAAGAATATTGACTAAGAATTTCCTAAATAAGGGGTGGGGGCGGGTCGGTTTTG
Unaligned ( gi|31 ): GTACATATCTTGAATCTATACATATTATTTCTGGAGAGAAAAAAAGGTAAATATAGTAAATACCATACATGTTTACATATATATTTTTTTATTATTTACAAATTTAAATCAATCTTATTCTGAT
Unaligned ( gi|32 ): TGTAAAGGTTCATTGAAAACTATGAAAAATTGTCAAAGATATTTATTAATAGACCACAAGTCATTGATTACACAACTTTGAACATGATGCGAGATGCACCAGTAATATCACAATAAAGTACA
Unaligned ( gi|36 ): GTATATTTAACAACCTTCCAAATGGCTTAACACTTAATAGCCCACCCTATCCTTTCTTACAATCAAATCCCACTTCACAAATGAGGAAGCACAACTTTGTTATAGAAAT
Unaligned ( gi|37 ): TTTGCAATCGGATGTACACACAAGACTTGGGAAACCCTACCTGATAATTAATTTGGATTGCCTATCGGTGCTAGGTATTCCTAAAGGAAGCGGTGAATACAAAGTTAA
Unaligned ( gi|38 ): TATTTATTTATCTTTATTTTTTTTTTTACAAATTAATCAATCTTATTCTGATTGTTTTTAATCTGCATTACCTAACAAAAATATCTAAAACCATTTTCTAGCAA
Unaligned ( gi|39 ): ATAGGGTATATAAGTCTCGACTTAGTTTCACCTTCACTTTTACTATTTCCGGGTACATCAACGGTATCAAAAATATGTATACTATTCCAAAACGTTGTAATC
Unaligned ( gi|40 ): ATTTTTATTATTTCTCTATATGGAAGAAAAATGCCCTTGCTAGAGAGAGAGAGAGAGGGGGGGGAGCTTGCACCTAGACTGCCACTTCTTGCTAGTATAAAC
Unaligned ( gi|41 ): TTGCAAACTGGTGCTAATCCTAACAGACAAGCAATTTAGTATATTTGACAAACTTTCAAATTGCATGACACTTAACATGTCACTCTTTCTTACAAATTC
Unaligned ( gi|42 ): AATATCGACAACGAATTCCCTAAATGGGGGAGGGGTTAAGTTTTAAGATACCATTTTTTTTCTGTATTTGTCAGAAAAAGGCGGAGGTACAACTAATC
Unaligned ( gi|44 ): GGGGGGGGGGGGGGGGGGGGGGCTGTTTTTGCCTTTAAAAACAAACTTTAATTTTCAT
Unaligned ( gi|45 ): GTAATGATTGCAAATTGTCTCTTAATCACATGACGAGACTTACAGACCCTATA
Unaligned ( gi|46 ): AAACAATCTCGCTATATCTCATCAATCATGTGACTAGGCTTACAGGCCCAAT
Unaligned ( gi|47 ): ATAGGGTCTGTAAGTCTCGTGTAGTTTCACTTTCGCTTTTACTACTTCCGG
Unaligned ( gi|49 ): AATAGGGTCTGTAAGTCTCGTTTAGTTT
Alignments
lowQualScore : 11 333333333333 11111 7777777777777777777777777777777777777777777777777777777777777 1 11 1 333333 1 1111 1 1 1 333333 22222222 44444444444444444444 2222 111 11 222 77777777777777777777777777777777777777777777777777777777 11 22222222 1 1 1 1 111 1 1 111 1 1111 111 444444444444444 1 11 11 11 11 111 111 2222222 111111 11111 22222222222 111 11111 111 1111 11 111 111111 222222 111111111 22222222 111 11 1 22 222222 11111 111 2222 111 1 1111 222222 1 2 22222222222222222222 1111111111 44444444444444444444444444 11111111111111111111111111111111111111111
lowQualScore : 1 9999 4 4 1 4 00 222222222222 66 66 1 00000 1111111111111111111111111111111111111111111111111111111111111 3 88 8 4 66 00 4 3 5 5 6 6 333333 5 3 0 8 2 5 2222 4 8 5 3 5 222222 44444444 5 4 00000000000000000000 77 2222 000 5 00 5 7 222 66 5 22222222222222222222222222222222222222222222222222222222 5 6 44 99 44444444 5 6 6 6 3 7 6 3 88 3 3 6 777 99 0 3 9 000 3 9 1 0 4444 111 6 111111111111111 6 6 9 0 6 7 6 5 88 55 6 66 6 3 3 88 8 444 0 8 8 5 6 7 7 777 9 1 3333333 1 6 1 6 999999 33333 22222222222 555 5 77777 555 6 4444 55 99 99 3 99 6 6 3 111 3 1 6 6 7 7 6 99 6 999999 5 0 222222 666666666 66666666 000 5 5 6 5 33 5 5 0 6 6 3 77 55 5 66 666666 55555 5 5 0 7777 5 99 4 66 4 66 555 2222 4 4 4 4 666 66 5 5 0 66 4 4 55 55 55 3 0000 44 3 44 333333 3 0 77 3 44 44 0 555 6 3 8888 3 44 3 44 66666666666666666666 9999999999 6666666666 3 33333333333333333333333333 6 3 4 2 22222222222222222222222222222222222222222 2 2 2 33 33 2 5 5 3 2 2
lowQualScore : . .... . . . . .. ............ .. .. . ..... ............................................................. . .. . . .. .. . . . . . . ...... . . . . . . .... . . . . . ...... ........ . . .................... .. .... ... . .. . . ... .. . ........................................................ . . .. .. ........ . . . . . . . . .. . . . ... .. . . . ... . . . . .... ... . ............... . . . . . . . . .. .. . .. . . . .. . ... . . . . . . . ... . . ....... . . . . ...... ..... ........... ... . ..... ... . .... .. .. .. . .. . . . ... . . . . . . . .. . ...... . . ...... ......... ........ ... . . . . .. . . . . . . .. .. . .. ...... ..... . . . .... . .. . .. . .. ... .... . . . . ... .. . . . .. . . .. .. .. . .... .. . .. ...... . . .. . .. .. . ... . . .... . .. . .. .................... .......... .......... . .......................... . . . . ......................................... . . . .. .. . . . . . .
lowQualScore : 0 4444 4 4 9 7 66 000000000000 11 11 1 99999 4444444444444444444444444444444444444444444444444444444444444 3 44 9 4 11 99 4 3 0 0 2 2 444444 0 1 0 5 5 0 6666 1 4 4 3 5 222222 22222222 7 3 66666666666666666666 99 3333 000 7 11 7 0 999 11 7 33333333333333333333333333333333333333333333333333333333 7 7 00 22 22222222 5 7 7 7 3 3 7 3 33 3 5 7 222 22 8 3 8 888 5 8 3 1 2222 777 7 777777777777777 7 7 8 6 7 3 7 0 33 88 7 00 7 2 2 88 0 888 8 0 0 0 7 3 3 888 8 0 8888888 7 7 0 7 222222 77777 00000000000 000 0 11111 777 7 2222 88 22 22 7 22 7 7 2 777 5 0 7 7 3 3 7 22 7 000000 7 7 111111 000000000 44444444 000 0 7 6 7 66 7 7 7 7 7 3 99 66 0 99 999999 99999 0 0 1 0000 0 22 4 11 4 11 777 4444 4 4 4 4 777 99 0 0 0 11 4 0 55 55 55 3 4444 66 3 66 888888 3 0 99 3 66 66 0 888 7 3 7777 1 22 1 22 88888888888888888888 2222222222 5555555555 1 77777777777777777777777777 2 1 5 9 11111111111111111111111111111111111111111 5 5 5 44 77 7 3 3 6 9 9
consensus : NNNNNNNNNNNNNNNNNTANTAATTTATGA----T-CAG-TTGATGGAATT--GACAGAATTTTA---C-TGAGC-CAT--TATA--AAGAC-TG-CAAA---A----------CTTT----TA-----------AAC---TT--TGAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGATTCAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G--TGTCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TT-AATACA-ATATTTCAA--GTAAAAC-CTACA-A------TATAC----------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CA-TTATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-CTTCATG-GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATCTATA-TTATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TATTAACACA-AANCA-TGCC--GA-TGCAT-AAACCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
Reference ( family-506 ) : NNNNNNNNNNNNNNNNNTANTAATTTATGA----T-CAG-TTGATGGAATT--GACAGAATTTTA---C-TGAGC-CAT--TATA--AAGAC-TG-CAAA---A----------CTTT----TA-----------AAC---TT--TGAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGATTCAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G--TGTCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TT-AATACA-ATATTTCAA--GTAAAAC-CTACA-A------TATAC----------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CA-TTATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-CTTCATG-GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATCTATA-TTATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TATTAACACA-AANCA-TGCC--GA-TGCAT-AAACCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
gi|1 : AATTTATAA----T-CAG-TTG-TGGAATT--GACAGAATTTTA---C-TGAGC-CAT--TATA--AAGAC-TGGCAAA---A----------TAAT----AA-----------AA-----T--TGAT---------TC-ACACTTGAAAAA-GT-TT--GTTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G--T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TT-AATACA-ATATTGCAA--GTAACAC-CTACA-A------TATAT----------------------GAT--------------A---CAAC-TGCTTT-GACCAG---AATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGT-ATAATAA-CA-T-ATT--AAAAC-TTTACTA-TAAA--CCTG-AATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTCAATC-TCAAACAAT-A-TTT--AGTGAAACTGGCACCATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-
gi|11 : aattatatctccaaactcatagtatctttatttcagagggtttgcagagtgtacaaaacttttgcagacaatttatagaaataagaaggaattcaaagaatatcgacaagcgcaattccctaaatggggggggggggggagggggggggttaattaagataacattttttttcttctgtatttgtcagaaagaaagcggaaggtcaactaaccgtgatcttattattagggggggggggggggggggggggggggcttgcgccttagactgtcactttcttgctagttataaactgctacatgtttcaagaagactcttacatgttgtattgtataatcgtataaaagagtgtaaaaagtaatcacatggcctttgagagaatgagttgattgtataaacctttatcctgtgtttcaattgaatttttttgggggctacatttaatttggggggggtatatgggcctgtaatattgtatatcatgtgaggtatgctgtcacatgtttataaaatttttattgaagggatcactgaattaattcggaagtgtcctagcacacgagatgttcctcacaagtcatgtaagaatttacggatggatctacaacaagtgactaatttaatgtcatttgtgatgcacttacattattttaaaagtgcaactcttgtgtgtattgctgagttcatccgactccgacaatttgtgagcatagcagaagtttcgcaaactgtgcgtcctgacaatcaataattatgtatatttgacaaacttttcaaatcggataacgcttaatatgtcccactttttactatcaactttcgataaaatccaaattttgaaaaaagagcatgcacaacttcatataaaaattggcattattaggattaggcaaataaaaagaatgcatgaaatgtagaacatattccttcacattctataaaaatttctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatacgatatcaaatcaaaatattctggaccagcttatgtggcacatgtgaaatatgctgtccccttttgacggtttggcagatccagcatcacattcgaagatttaacacagttgtaaacacatattcatgtcatatgcttgaatctatacatattatttttggagaaaaataggtaaaaatacttatactaaatacctacattgtttgcatatatttttttatttattttttttttttacaaatttaaatcaatctattcttagattgtttttaaattgcagttactaaacaaaaaatctacatccatttctctagcaaattgtatgttatttaaagattttttgtaatagtgaaactgaagaaaacttgtcaaacacatactcttagttatcaccatgtcattacgacgctgttcaacatgattgcaaggtgctcacgattacgtaatattacaaataaagtacatgcatattttggatctgtgtttgtgttaTGGGA-TGGCTGT-T--ACTTA--GGATGTTTTTG-TCCAA-TTACAGTTGCATTT-ACTTCAGTTTTTACTTCC-TCCTT-AG-TCTGAAAAAAAA-TTAAATCTATA-TTATTAATATCAC-TGTTAGCAATAGCGACTTGATT------TAT---TATAT-------TTATTTTTTAAAG-A-AAATAATAAA----TGAAAAA--TG-TGA----CTAC-TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCA-TGTG-GAAATAAAAATACGATT--TGCACTCACTCACACTGCAGGTATAT-AACCCCCCA-----CCCCCCCCCTCCCCGAAGAACGT--------GCCTTTTATTAACACA-AATCA-TGCC--GA-TCCATAAAACCTTGTC-TGTTTTCAATAAAGCCATAAATTG-AACTTTATAGATATG-AGAATCAAGAAAAACGGCCATTAT--GCATGTATTCTAA--CTAAT------AGAT-A---ACGGTCT-ATA--C-CAAACCTA-TATTTCCGC--ATTTCCTCC--GTGTATGGCACTGATG----TATTACACGG-CAATTCG-CC-AAA---GGG--TAG-CGAATTAAACCTTCTGCA--TCTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG-------TT-ATCTGT-G--GTTAA-T--C--CTTTAA---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------A----CTATCTT------C---ATC---------CA-CTAC-TGCA--------T-CA---T----C-T-CC-GGGT-C--A-C---CC---------G------A-------T------GT-A--CCGGA-AGT--AAA--CAAAT-CAC--TCATTTCTC
gi|12 : TTTATGA----T-CAG-TTGATGAATTT--GACAGAATTTAA---C-T---CTTATTATATA--AAGA-----CATA---A----------TTTT------------------AC---TTTATGAT------------AAA-T--AAAAA-GT-TT--GTTGA-TCAG-A-TACA-TATTTTTCACT-GTA-AACTAATTGAGCGACAATG---AGAGT-CA-TA----TT-AGTAAATCGCAACACTGG-G--TGTC
gi|13 : tagatattaaaatattcaaagtctgtgtggtccatgtgtatacgctactccacttttgaagcagtttgcagatgaacatcacattgaagatcttattaactcagtatatttacatgctatcaggctatcagcatatattcatgtatatcttgaatctgccacttccaaactctacatattatttttgaagtcaatgttaaataccatacatgtttgcaatttttttttacaaatttaaatttcctacaatttttaaatctgcattacctaacaaaaatatctaaaatccgtttctttagcaaatgcatattatttaattatttttgcaaagctggacactatgtctatacatgttaaaagttcattcaaaactatgaaaaactgtcaaaaatatttattaatagcccacatgtcattacacaactttgaacatgttgcaagatgcaccagtaatatcacaattaagtacatgtatattcggatctgtgtttgtgTTATAA----T-CAG-TTAATAGATTT--GAAAGGGTTTTA---CATG----CAT--TGTA--AATAC-TG-CGAAACTA----------CTCT----T-------------AC---TT--TGATAAAATTCTATT-ACA-TGTAAAAT-GT-TT--GCTGA-TCAGAA-TCCA-TCTTTTT
gi|14 : acatattccatcacagtatacatgtcaaactattcgaactttatgtggcctatgtgaatttgctactcattacagataattatgagaatgaagatcgtgcggactcagtagatcaattgtacctaaatgtatatcttgaatctgcccaaatttaacaatattgaacctctacatgttatttttaaagttaatagctataaatatcatacacgttacatatggtttttttttatttttaatcatttaagctttttgttctgattcagagtgttttcaaatatgcataaattacacaatatatttaaaatatatatctcgctagcatatgtatgttgtttaatgagttttgtttttggtaaagctggacactatggctatgcctatgcatctataggttaatcaaaaactatgtcaaaaatgtttattaatatttgtagcaacatgtaattacgtagcttcgaacatgttgaaagctgcatcattaatgtcataataaagtacatgtagttttgattctgtgtgtgtatttaA-AATAAA-----AAAAA---TA-TGA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAC---GAATT-TT-CAATGCATTT-GTCC-TTGTA-AAAAT--AAATATGATTG-TGCACT----------GCAGGTAAAG-TACCCACC------CCCTCC--------TCTGAACGT--------GTC---TATTTACACA-AAGCA-TGTC--TA-TGGAT-ACACCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTG-GGAATACATAAATACG--TATTATATGCATGTA-TCTAG--CTCAT------AGATAA---AC-GTCT-ATA--C-C-AACCT--CA-TCCCGC--ATTTCCT-C--GTGTA---CACTGGTGGTTATATTACAC-G-CAATTCG-TCAAAA---GGG--TAG-CT-ATT-AACCTTCTTCG--ACTT-T-TCT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGTGG--TTAAA-T--C--CTCCAA---A-T-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------C---AT----------CA-TTA--------------------------C-T-CCTGGGT-CATA-C---CC---------GATTGTCA-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTTATATCTCG-T-AAGTCACAT
gi|15 : -AATAAA-----AAAAA---TA-TGA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAC---G-A-T-TT-CAATGCATTT-GTCC-TTGTA-AAAAT--AA-TATGATTG-TGCACT----------GCAGGTAAAG-TACCCACC------CCCTCCTT-----------ACGT--------GTC---TATTTACACA-AGAAG-TTCTAGGA-TAC------CCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTG-GG-ATAC-TAAATACG--TATTATA-GCATTTA-TCTAG--CTCAT------AGATAA---AC-GTCT-ATA--C-C-AACCT--CA-TCCCCG--ATTTCCT-C--GTGTA---CACTGGTGTTA-TATTACAC-G-CAATTCG-TC-AAA---AGG--TAG-CT-ATT-AACCTTCTTCG--ACTT-TCTTT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGT-GGTTTAAA-T--C--CTCA-A---A-TCA--A-CA-GAT-AT-AAC--GC-TA--TA---------------T----CTATC-T------C---AT----------CATCTA--------------------------C-T-CCTGGGT-CATA-C---CC---------G------A-------TTGTCTAGT-AC-CCGGA-AGT---AA--C-AAT-CACAGTTAT---TCG-T-AAGTCACATgacgagacttacagaccctatt
gi|16 : AAAATTATAATT----AGC---ATAGA-TAAACTCTTCATTTCACAATGTTGA-CTTACCAAGAGCTAAATCC-TAACTTGTTgacgagacttacagaccctat
gi|16 : ATC-TCAAACAATAA-TTTCAAGTGAAACTG-TA--ATGG--CC--TGC---TGCAG-------TTAATTC-CTTCATA-GTTGTTGGGA-TGGCTGTGTCGACTTG--GGATGTTTC-G-TCAAA-TTACAGTTGCATTTTACATCAG-TTTTACATGCCTCC-TTAGATCTGAAAAAAAAGACCAATTTA-------TAATATCAC-TATTAACAATAAC-ACTTGATCTTTTTATAT---A-TAT-------TT--TTTTTAAAT-C-AAA-Acgcatacctctttagttttcagtgttgtagctgaaaatgggcactttatctcaaacaataatttcaagtgaaactgtaatggcctgctgcagttaattccttcatagttgttgggatggctgtgtcgacttgggatgtttcgtcaaattacagttgcattttacatcagttttacatgcctccttagatctgaaaaaaaagaccaatttataatatcactattaacaataacacttgatctttttatatatattttttttaaatcaaaatcaa
gi|17 : aaaattataattagcatagataaactcttcatttcacaatgttgacttaccaagagctaaatcctaacttgttcgcatacctctttagttttcagtgttgtagctgaaaatgggcactttTTCATAA----TTCAG-TTGATGAAATT--GAAAGAATTTC----C-TGG---TAT--TATA--AATTT-TG-CAAA---A----------ATAT----TATGT--------AGTGTATG--TGATAAAACTACACC-ACACTT---AAA-CT-TTGCGTTGACT-AGAA-TGCA-TCTTTGTAAAT-ATA-GACTACTTCAATGCCC--GCA-GGAGTACA-CAC----T-AGTAAA--GC--------------TCTTTCCGGCGCGGTTGTCC-TTG-AATCTGATGTCAATAATCATACTGCGGTTTGA-GTG-AAGAAAGTCATCC--C-T-TACATACATGCAAACACATTCTAAAATGA--CAA-----A---TT-A--ACG-GCATTCC---------AT-CTACATA------TATAC----------------------TAT-------------TAAATCAAC-tcaa
gi|18 : CATGTA-TCTAG--CTAGT------AAAT-AGTTAC-GTCT-AGATTC-C-AACC-A-TA-TTCCAC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAAG--GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-CCT--A--CT--GC-TT----CA--A-TTTTCA--TA------TTT-ATCTGTGG--TTTGT-T--C--CTTTAA---A-T-A--A-CACAATGAT-AAT--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTA--------------------------C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAC-CCC-GCCATTTCTCG-T-GAATCACAT
gi|19 : cTTTATGA----T-CAG-TTGATG-AATTTTGACAGAATCTTAACTC-T-----TAT--TATATAAAGACAT----AA---T----------CTTT----TA-----------CGT---TTA-TGAT------------AAA-T--AAAAA-GTATT--GTTGATTCAGA--TACAGTATATTTCACTAGTA-AACTA-TTGAGCGACAATG---AGAGTC-------AATT-AGTAAATCGCAACACTGG-GGATGTCTTTTGGA-GTTGTTGTCgacgagacttacagaccct
gi|2 : ccaccatgtattacacaacacctgtgaacatgttgcaagatgcaccagtaatatcacaattagtacatttgtatatctcgattctgtgttttgtgT-C--A-CG--TT---------G------A-------T------GT-AC-CCGGA-AGT--A
gi|22 : atagggtctgtaagtctcgttagtttcactttcgcttttacG-AGGCAAACCATCC--CCT-GA-GT---------CACATTTTAAAACGG--CGAA---TG---TC-ATTACACGTATTTTATTTGTA------TACA--------TATAC----------------------GATATTATTTACTTTATA---TAAC-TGCTTT-GATCAG-TGGTGAAAGTATTTTACTACAAGTACAAATAT-AT-ACTTATTTT-GACA-TAGAT-T-CAG-CGGTATTCAAAACTTGATG-CAAGT-AAATTTTA--TG--A-AAAAA-AA-----T--AACA-GTTCACTG-TAAAGCCC-A-AGTAGTGCTGGCA-TTCATCCATAGA---CTATCAAAGT-TTACAAacttgtactatacaaacgttgaatggttccaaatacataattttgtgcatgtttttgcaatcggatgtacacacaagaccgggaaaaccctcctcatagttgatttggattccctatcgatgctaagtaggctaacccttaaggaagcggtgaatacaaagtaaagtaggtaagtacgatcataatcgataaataaaatgtaaagtgatattaaatatatctccgaactcatagtatctttatttcagaggtttgcagatgtacaaaatttttgcagacaaactatagaaataagaaaaggaattaaaagaatatcgacaacgaattccctaaatggggggggggggttaagttttttaagataacattttttttctgtatttgtcagaaaaaaggcggaggtacaactaatcgcggtgatcttattattaggaagggtgctggggggggggggtattgcgcctagactgtcacttcttgctacatgagtataaactagctacatgtttcaagaagactcttacatgttgtatgtattcgtataatgtataaaaagtctcatatggcttgatgagaatagttgatgtatacttcctgtgttcaattgattttttttggggcacaattaattttggggtggggagtgggggggggggggtatattgcgcctgtaaatattgtatacatgggtatctttcacatgtttaaaatttttattgagggatcatgaaacttggatgtccagcaactgaaatgccatgatccatgccaagtcatttgagaaatttacgatggatacaacaaagtgcctaatttaatgtcattatggatgcacttaattataagtgcaactcttggtggtatgctgaattcatccgactcgacaattgtagcatagcaaagaagttgcaaactggtgctgatcctgacaaagttttagtatttttgacaaatttcaatggcataacacttaatatgtcacttttaatactttcgaataaatccaaaattgaaaagacatgcacaacttcattataaattggcattttagtataggaaataaaagaatgcatgaatgtagacatattcttcacatttctataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcagtatagatatcaaaatcaatattctggacccagctttattggcacatgtgaatatgttgctcccttgaaggagtttcagatgcagcatcacattcaagatcttaacacagttacacatattctgtacatatcttgaatctatcatattatttttggagaaagaaggtaaatcatgtatactaaataccatacatgtttggcatattattttttttttatttctttatttattttatttttttagcactttttaaatcaatcttattctgattgttttttaaatctgcattactagacaaaaatatctaaaatccattctctagcaattatgttatttaaaggattttttgtaaagttgacactatgtctatacagtaaaaggttcacttgaaaactatgaaaaaactgtcaaaaaattatttattatagccacatgtcattacacagctttgaacatttgcaagatgcccattacgtaatat
gi|23 : TA-TA-TTCCGTCAATTTCCT-CTCGTGTAT--CACTGATG-T--TAT-ACAC-G-CATTTCG-CC-AAATGTAGG--TAGTCG-A----ACCT-CTGCATAACTT-T-TCT--ATACT--GC-TTT---CA--A-TTT-CA--TG------TTT-ATCTGT-G--GTAAAAT--C--CTTTTA---A-T-ATTG-CACAAT-AT-CAC--GC-AA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--ACC---CC---------A------A-------T------G--ACACCGGA-AGTAGAAA--C-AAT-CAC--TCATC---CGAT-GAATCACAggaata
gi|24 : ctaACCTTCTGCA--ACCT-T-TCT--A--CTAAGC-TTATTTCAGAA-TTTTCAAATG------TT--AT-TGT-GG-TTAAA-TATCAACTTT-A---A-T-A--G-CACAATGAT-GAC--GC-TA--CACGTGCCATAGGGTGGT----CCACCTTATTCCAC---ATCTAATCTTATCA-CTACTT-CAATTAAATGT-CATAGT----CCT-TCTGGGT-C----CTCACC---------G------A-------T------GTAAC-CCGG--AGT--AAA--C-AAG-CACTGTCATTTCTCG-T-GAATCACATgacgaacttaccagacccta
gi|27 : tag-TTT--A--CT--GC-TT----CA--A-TTTTAA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTCTCA---A-T-A-----ACAATGAT-AACACGC-TA--TA---------------T----CTCTCTT------T---AT----------CG-CTAC-T-CC--------T-GG--GT----CATACCCGAGT-G--------TC---------G------A-------T------GT-AC-CCGAA-AGC--AAA--C-AAT-CAC-GCTATATTTCG-T-CAATCACATgacgagacttacagactccta
gi|28 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTAAA-T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA---------------GGGT-T--A-C---ACACGAGAATGG------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAG-CAT-GTTTTATCTCG-T-AAATCATATgacgaaacttacagacccta
gi|29 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTA---T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA--G--------------GTAC--A-C---AC---------G------AGAATGGAT------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttacagacccta
gi|3 : TAGTAATTTATGA----T-TAGGTTGATGGAAT---GACA-AATTTTAG--C-TGAGC--AT--TATA--AAGAC-TG-CAAA---AAAATACGTTACTTTATAATA-----------AAC---TT--TGAT---------TC-ACA-TTGAAAAAAGT-TT--GTTGAT-CAGAT-GACA-TCTTTT-CACT-GTG-AAATAATTGAGTGTCA--A---CGAATCCA-AACTAGTT-AGTAAATCACAA-A-TGATG--TGTCTTTCGGGTGTTGTAGTCC-TTGAA-TCAGAT------GGTAATA--------TGAGGTG-AAGCGAACCATCA----T-GA-AT---CA----CATATTCTAAAATGG--AAAAT-GCA---TTTAATACA-ATATTTCAA---TAAAAC-CTACA-ACTATGATATACAACTGCTTTGATCATGAATAAGGATAA-----------TA---CAAC-TGCTTT-GATCAGGTGAATAAAGTATT--AC-GCA--------TA-CATCACTTATTTTTGAAAGTAAATGTACAA-CTGTATTCAAAAACTGATG-CATGT-ATAGTTTAAGTGTAA-AATAACCATTTATT--AACACCTTTACTATTAAAACCCTGAAATAGTGC-TGCATTTCATTCATAAAATGTTATCATAATATTA-AATA----AGC---ATAGACT---------------CAATGCTGACCTTACCAAGAGCGAAATCCTTAAC-TTTTTTTAAATCTTCAAACAAGAA-TTT-AGGTAAAACTGGCA--ATGGT-CTGTTACA-TTACAGATGCT-GTTAATTC-Cgacgagacttacagacccta
gi|30 : tgtatgctgaattcatccgaactcgacaattgtagcatagcaaagaagttgcaactggtgtgatcctgacaaagttatttaagtatatttgacaaatttctaaatgcataaacttaatatgtcccacttttgatactttcgaataaatccaaaattgaaaagagatgccacaacgttcattattaaaattggcacctattggtaggcaaataaagaatgcagaaatgtagacaaattccttcacattcttataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatatgatattcaaaacaaaatatttggaccagctttatgtgggcacatgtgaatatgctgctccccttctttgaaggagtttgcaagattcagcatcacatcaaagatcttaacacagtctacacatattcagtacatatctgaaaatctatacctattattttttggagaaagaagtaaatacatgttatactaaaataccatacatgtttgcatatttttttttttttatttattttattttgtttcatcaaatttaaatcaatcttattctgattgttttttacaaatctgcattacctaacaaaaatacaaaatcatttctctagcaaatgtatgcttatttaaatattttttgtaaagcttgacactatgtctatacatgtaaaggttcactgaaaactatgaaaagctgtcaaaaatatttattaatagccaacatgttcattacacagcttgaacatgttgcaagatgcaccagtagtaatatcacaataaagtacatgcatatttggatctgtgtttg-TTACAGTTGCATTTTACTTCAGTTTT-ATTTGCCTCCTT-AGATCTGAAAAAAAA-TGCAATCTAT------CAATGTTACATGT-AGCAATAGC-ACTTGATC------TAT---T-TCTTTCTTTCTT--TTTTTAAATAA-AAA-AATAAA----TGAAAA---g
gi|33 : AGATATGA-CACCACCC------C-CCCCCCC--------GAACGTGCCTATGCGCC---TATTAATACA-AAGCA-TGCC--TA-TGCAT-AAACCTTCTCTTGTTTTCAATT
gi|34 : ctttcaatgcatttgttcttgtaaaaatAAACG--TATTATATGCATGTA-CCTAG--CTCATTCATGTAGAT-A---AC-GTCT-ATA--T-C-GACCTT-TA-TTCCGC--ATTTCCT-C--GTGTA--G-ATTAATGGTTATATTACAC-G-CAATTCG-AC-AAA---
gi|35 : ACAATGAT-AAT--TC-TATACA---------------TGTAACTATCTT------T---AT----------CA-TTAC-T-CT--------T-GA--GTGACAC-T-CGCGAG--C--G-T---C----------G------A-------T------GT-AC-CCAAA-TGT--AAA--T-AAT-CAC-GCCATATCTCG-T-AAATCA
gi|4 : acaatTGCTAATTTATGA----T-CAG-TTGATGGAATTT-GACAGAATTTTA---C-TGAGC--AT--TATA--AAGAC-TG-CAAA---AATA-------CTTT----TACTTTATAATAAAAC---TT--TGAT---------TCCACA-TTGAAAAAAGT-TT--GTTGAT-CAGAAATACA-TCTTTTCC--T-GTGGAACTA--TGAGTGTCA--ACGAAGAGTCCATCACTAGTT-AGTAAATCA-AACGCTGA-G--TGTCTTTCGG-TGTTGT-GTCC-TTGAA-TCAGAT------GGTAATA--------TGAGGTGGAAGCGAACCATCC--C-TTGA-ATA--T-----CACATTCTAAA-TGGCAAAAG--GCAATTTT-AA-ACA-ATGTTTCAA---TAAAAC-CTACA--------CATAT----------------------GAT-------------TA---CAACATGCTTTTGATCAG-TGAATAAA-TATT--ACTGCA--------TA-CAT-ACTTATTTT-GAAA-TAA-TGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGC-A-AATAA-CA-TTATTAAAACACCTTTACTAGTAAAACCTTG-AATAGTGCTTGCCATTCATTCATAAAA-GTTATCATAATATTATAATA----AGCTAGATAGA-T---------------CAAGTCTGA--TTACCAGAAGCTAAATCC-TAAC-TTTTTTTAAATC-TC-AACAATAATTTTCAGGTGAAACTGGC---ATGGGTCTGTTACA-TTGCAGATGCTT-TTAATTC-CTTCATGAGTTTTTGGGA-TGGCTGTGTCGACATAATGGATG-TTT-G-TCCAATTTACAGTTGCATTTTACTTCAG-TTTTACTTCCCTCCTTTA-ATCTGAAAAAAAAATTTAATCTATATTTATTAATATCAC--GTTAGCAATAGC-ACTTGATC------TATTTAT-TAT-------TT--TTTTTTAATAA-AAA-AATAAATTTTTGAAAAATTTGTTGAACCCCTAATTTGGTTAACGCCTTCAGCATAGAACCGTACTATGTA-ACACTTGAAAG--AAAG---GTACT-TT-AAATGCA-TTTGTTCATTGTG-G-AAT--AAATACGATTGTTGCACTCACT-GCACTGGAGGTATAGTTACCCCCCCCCCCGCCCCCCCCCCCCCCTCTGAACG---------GCC---TA-TAAAACACAATCATTGCCT-GA-TGCAT-AAACC-TGTCTTGTTTTCAATTAAGCCATAAATTG-AAC-TTAATGATATGAAA-ATACAG-AAAACG--CATT-TG-GCATGTA-TCTAGGCCTAAT------TGAT-A---AC-GTCTAATA--CGC-AACCTATTA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGAT-GT--TAATACAC-G-AATTTCG-CC-AAA---GGG--TAG-CG-ATTCAACCTTATGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTTAATCTTG-G--TTAAA-T--C--CTTTGA---A-T-A--GTCACAATGATAAAC--GC-TA--CA--------------------CTATCTT------CATAAT----------CA-CTAC-T-CA----------CA--GT----C-C-CCTGGGT-C--A-C---CC---------G------A--------------GT-AC-CCGGATAAT--AAC--A-AAT-CAC-GTCATTTCTCG-T-GAATCACAT
gi|43 : agtacatgcatatttgatctgtgtttg---------G------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttaacagacctat
gi|48 : -AC-CCGAA-AGT--AAAATA-AAT-CTC-GCTATATCTCG-TAAAATCACATgacgagacttacagaccctat
gi|5 : gaAATTTATAA----T-CAG-TTG-TGGAATT--GACAGAATTTTA---C-TGAGC-CAT--TATA--AAGAC-TGGCAAA---A----------TAAT----AA-----------AA-----T--TGAT---------TC-ACACTTGAAAAA-GT-TT--GTTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGTAAC-G---AGAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G--T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TT-AATACA-ATATTGCAA--GTAACAC-CTACA-A------TATAT----------------------GAT--------------A---CAAC-TGCTTT-GACCAG---AATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGT-ATAATAA-CA-T-ATT--AAAAC-TTTACTA-TAAA--CCTG-AATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTCAATC-TCAAACAAT-A-TTT--AGTGAAACTGGCACCATGG--CTGTTACA-TTGCAGATGCTCGTTAATTCGCTTC-TA-TTTTTTGGGATTGGCTGTGGCGACTT---GGATGTTTT-GTTCCAA-TTACAGTTGCTTTTTA-TTCAGTTTTTATCTCCCTCC-TTAGATCTGAAAAAAAAATTAAATCT-TA-TTA-TAAT-TCAC-TGTTAG-AATA-C-ACTTGATC------TA----T-TAT-------TTTGTTTTTAAAT-ATAAA-AATAAA----TG-AAA---TG-TGA----CTA--TTG--TA--G-C--CAGCATAGAATCCTACTATGTATACAC-TGATAGG-AAAGTCTGTACTATTAAAATGCGTTTTGTTCATTGTGTGATAT--AAATATGATTG-TGCACT-ACT-GCACTGCA-GT-TAG-TA----CC------CCCCCCCCTCCCCCTCTGAACGTG-------GCC---TATTAACACA-AA-CA-TGCC--GATTGCAT-AAAACTTGTCTTGTTTTCAATTAAGCCCAAAATTGAAACTTTAATGATATG-AG-AATCAGAAAAACG--CATTAT--GAATGTA-TCTAG--CTAGTTTTTA-AGAT-A---AC-GTCT-A------C-AACCTA--A-TTCCGC--ATTT-CT-C--GTGTAT-GCACTGATG----TATTACAC-GCCAATTCGCCC-AAA---GGGGTTAG-CG-ATT-AA-CTTCTGCA--ACTTAT-TCTTAA--CT--GCTTT----CA--ATTTTTCA--TGTT----TTT-ATCTGTGG--TTAAA-T--C--CTTT-AAAGA-T-A--G-CACAATGAT-AAC--GCTTA--CATT-------------T----CTATCTT------C---A-----------CA-CTA--T-CA--------TCCA--GT----C-T-CT--GGT-C--A-C---CC---------G------A-------T------GT--T-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACAgacg
gi|6 : agtacatgcatattttggatctgtgtttgtgttaTATTACTTTTTGAATAGT-CA--TTGATG----T--GACAGA--TTTA-----TGA----AT--TATA--AA--------AAA---A----------CTTT----TA-----------AAC---TT---GAT---------TC-ACA-TTGAAAAA--T-TT---TTGAT-CAGAA-TACA-TCTTTTTCACT-GTG-A-CTAATTGAG-GTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCACAACTATGA-G---GTCTTTCGGGTGTTGTAGTC--TTGAA-TCAGAT------GGTAATA--------TGAGGT--AAGCGAACCATCC--C-T-GA------T-----CACATTCTAAAATGG--AAAA--GCA---TT-AA-ACA-ATGTT-CAA---TAAAACGCT-CA-A------TAT------------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TG-CAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATGGCATGT-ATAGTT-AAGTGT-A-AA-AA-CA-TTATT--AACACCTTTACTA-TAAAACCT---AATAGTG-TTGCATTTCATTCATAAAA-GTTATCATAATATTATAATATTGAAGC---ATAGG-T---------------CAATGCT-A-CTTAC-AAAAGCTAAATCC-TA--CTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGT--CTGTTACAATTGCAGATGCT-GTTAATTC-CT-CATG--TTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TC-AA-TTACAGTTGCATTTTACTTCAGTTTT-ACTTCCCTCCT--AGATCTGAAAAAAAAATTAAATCTAT--TTAT-AATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TA-TAACACA-AATCA-TGCC--GA-TGCAT-AAACCTTG-CTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTAT--GCATGTA-TCTAG--CTAAT------AGAT-----AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-TCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAAG--GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-T---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACATgacgagacttacagatt
blockSeqs : C ATAG T G A A TT GCTGAGC TA TA G CTGG AATATTATGTAGTGTATGTGATAAAACTACACC C GT A A GC CT A G A G A C ACGA T T G G C T GATG C G T C A GTCAAT CTGCGGTT G C CTTACATACATGCAAA CA AATG ATT T TT C C TTG AA G ACTATGATATACAACTGCTTTGATCATGAATAAGGATAATA A T GT TT AGTACAAA T C T G A T G C TA T A C TTT AA G T G TGA T C T TTGA TAG C AAACTCTTCATTTCA C T T T A T C CC GT A CG G T A AG T AAT . T A T T T TTT G C ATTTATT A A A . TTTTTA TTAT TTCTTTCTT AA . TTTTT ATT T ACCC AT GT AC T TT T T A TCT A T A A T A T . T CACTG T CCCCCG CCCCCCTCT GCCTATGC . T C G T AG T . A A A . AT . GC TCATGT AGTT . A TTC . AT . CA . TC TG GTTA . C C A TGT GT T . C TA A C TA TA AA T ATTT GA T AA CATATG A G GT A AT AA A AAG A C TTG A AC T TA CGTGCCATAGGGTGGT ATTCCAC CTAATCTTAT T CTTCAATTAAATGTCATAGT C A T A ACACACGAGAATGGAT A A T AG AT . A A A A A
blockSeqs : T . . . A G T CTGAGCC . . T CTG AATACTTTTACTTTATAATAAAACTTTGATTCC C TG A . . TT . G . . C T ATG . T . G C . TG T T T . A T . . C CTTGAATAT . ATG . . AT . T G AA . TATACGATATTATTTACTTTATA . . T . . T . . . . T . . C . T . TT . C G A TG A T T . . . . . . T . A . C . T . G . T A T . G . . C . T T TT A C ATTAT G . G . . A TTTG AA . T . . . . . . T . . . A . T C . . T A . . . CACTG . . TCCCCCTCT G . T . A . T . . . . . . AT . . TTTTA AA . . CG . A . . . . TG GTTA . . . . G . . . . . . . . . . . T . . . CATATG . G G . . . A . A . GT . . . . TGTAA CATA . . CTCTTGAGTGACA A . T . ATACCCGATTGTCAT . . . . . . A T T . .
blockSeqs : . . . A A . ACTCTT . . T TTG AAAATACGTTACTTTATAATAAACTTTGATTC . TG . . . TT . . . . A C GCA . T . G C . TG T T A . . . . . C ACTTGAATT . GG . . AT . T . AC . TATATACTATTAAAT . . T . . . . . . . T . . T . T . TT . C . A TG T T . . . . . . . C . A . C . . . T . . . . . A . . C . T T TT A T TTAT A . G . . T TT AT . T . . . . . . C . . . A . T C . . T A . . . ACTG . . CCCCCCTCT . . T . G . . . . . . . . A . . . AA . . C . A . . . . TG TTA . . . . G . . . . . . . . . . . . . . . TT . G . . . . T . . . A . . . . TTT C . . CTCATCAGT . . T . ATACCCGATTGTCTA . . . . . . . . C . .
blockSeqs : . . . A G . CTGAGC . . G CAT ACTACTCTTACTTTGATAAAATTCTATT . TG . . . T . . . . A T ATG . T . A C . TG T T A . . . . . C CCTGAGT . AG . . A . T . AA . CATATGATTA . . T . . . . . . . T . . T . T . T . C . A A T T . . . . . . . . . A . . . . . G . . . . . . . . . TT A A T A . G . . T TT C . T . . . . . . C . . . . . T C . . . . . . . . . . TCT . . T . T . . . . . . . . G . . . A . . C . T . . . . TT GT . . . . . . . . . . . . . . . . . . . . . . . . . . . C . . . A . . . . T C . . CTCCTGGGT . . T . ACACGAGAATGGAT . . . . . . . . T . .
blockSeqs : . . . A G . CTCTT . . G CTG TCTTTTACGTTTATGAT . TG . . . T . . . . A T CG . . . A A . T . T A . . . . . C TGAATCA . A . . A . G . . . ATATATGATA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . A C . . . . . T TT A . . . . . . . . . . . . . . . . . . . . . . . . . . C . . . . T . . . . . . . . . . . . A . . T . A . . . . T GT . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . A . . . . T C . . TCATCCAGT . . T . CTCACCGAT . . . . . . . . A . .
blockSeqs : . . . A G . CATGC . . G CTG ACTTTTAAACTTGATTC . T . . . T . . . . . T A . . . A . . G . . . . . CTGAT . . . . . . . . . . ATATGATTA . . . . . . . . . . . . . . . . . . . . . A . . C . A . . . . G GT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . T C . . CTCATCAGT . . C . ACGTTGAT . . . . . . . . A . .
blockSeqs : . . . A . . CTGGT . . G . ATAATAAAATTGATTC . . . . . T . . . . . . G . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . T T . . CTCACAGT . . C . ACCCCAAT . . . . . . . . A . .
blockSeqs : . . . . . . TGA . . . . ATTTTACTTTATGAT . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . A . . . . T T . . CTCCAG . . T . ACCCGAT . . . . . . . . A . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . G . . . . T T . . CTCCA . . T . ACCCGAT . . . . . . . . T . .
blockSeqs : . . . . . . . . . . . . . . . . G . . . . T T . . . . . . . ACCCGAT . . . . . . . . A . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . T C . . . . . . . GTCGAT . . . . . . . . A . .
blockSeqs : . . . . . C . . . . . . . ACCCGA . . . . . . . . T . .
blockSeqs : . TCGAT . . . . . . . . T . .
blockSeqs : . . . . . . . . .
blockSeqs : . . . .
blockSeqCons : CTGAGC****** CTG** T* ACG*** TG** ****** AG** *** T* TT* ** G* TTAT*** T**** TT********* AA* *** ** ** ACTG** ****** *** ** AT TG* GT** **********
originalCons : NNNNNNNNNNNNNNNNNTANTAATTTATGA----T-CAG-TTGATGGAATT--GACAGAATTTTA---C-TGAGC-CAT--TATA--AAGAC-TG-CAAA---A----------CTTT----TA-----------AAC---TT--TGAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGATTCAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCA--G---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G--TGTCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-----TGGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TT-AATACA-ATATTTCAA--GTAAAAC-CTACA-A------TATAC----------------------GAT-------------TA---CAAC-TGCTTT-GATCAG-TGAATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CA-TTATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-CTTCATG-GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATCTATA-TTATTAATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TAT-------TT--TTTTTAAAT-A-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TATTAACACA-AANCA-TGCC--GA-TGCAT-AAACCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTATA-GCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTAT-GCACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
finalCons : NNNNNNNNNNNNNNNNNTANTAATTTATGA----T-CAG-TTGATGGAATT--GACAGAATTTTACTGAGC------AT--TATA--AAGACTG--CAAA---A----------CTTT----TA-----------AAC---TT--TGAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGAT-CAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCAACG---AGAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-GTG--TCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT------GGTAATA--------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAAG--CA---TT-AATACA-ATATTTCAA---TAAAAC-CTACA-A------TATAC----------------------GAT-------------TA---CAAC-TGCTTT-GATCAGT-GAATAAAGTATT--ACTGCA--------TATCAT-ACTTATTTT-GAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CATT-ATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCTG-TTAATTC-CTTCATG-GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATCTATTTAT---AATATCAC-TGTTAGCAATAGC-ACTTGATC------TATT----TATTT---------TTTTTAAATAA-AAA-AATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAAT--AAATACGATTG-TGCACTACTG--CACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCC---TATTAACACA-AANCA-TGCC--GA-TGCAT-AAACCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-ATACAGAAAAACG--CATTATATGCATGTA-TCTAG--CTAAT------AGAT-A---AC-GTCT-ATA--C-C-AACCTA-TA-TTCCGC--ATTTCCT-C--GTGTATG-CACTGATGGT--TATTACAC-G-CAATTCG-CC-AAA---GGG--TAG-CG-ATT-AACCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
22 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TAGACTGCCACTTCTTGCCAGTATAAACTGCTGCATGTTTCAAGAAGACCCTTACATGTTTTATTGTATAATCTTATAAAAAGTCTCACATGGCCTTGATGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAACTGAAATGCCTAGGATCCATGCCAAAGTGGGGGGGTATTGCCCCTGTAAATATTTATGTGGGTACTTTCACATGTTTTAAATTTTTTATTGAAGGGATCATGAAAACTTGGAGTGTCCAGCCAACTGAAATGCCTAGGATCCATGCCAAAGTCATTTGAAGAATTTACGATGGATACAACAAGTGACTAATTTAATGTCATTGTGATGATCAACTCTTGTATGCTGAATTCATCCGACTCGACAATTGTAGCATAGCAAAGAAGTTGCAACTGGTGCTGATCCTGACAAAGTATTTAGTATATTTGAAAATTTTCAAATGGCATAACACTTAATATTCCCCTTTTTAATACTTTCGAATAAATCCAAAATTGAAAAAGAGCATGCACAACTTCATTATGAATTGANNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGACAGAAGCTAGCAGATCGTGTCCTATTTGGATAGGCAAATAACAGAATGCATGAAATGTAGACATAGACATATTCCTTCACATTTCAATAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTAGATATCAAATTTATCAAAATATTCCAGCTTTATGTGGCACATGTGAATATGCTGCTCCCCTTTTGAAGGAGTTTGCAGATCAGCATCACATTGAATATACAGTTACACATATTCATGTACATTTCTTGAATCTATACATATTATTTTTGTAGAGAAAAAAGGTAAATACTAAATACCATATATGTTTGC
Unaligned ( gi|8 ): AGTACTGTAGTACTCAGTTTAGTTTCACTATTCGCTTTTACTACTGTTCCCGGGTACATCAACCAGTATGGAACTTGTCTGATCACACATTCATAATACTTTGCCCCTACTAAAATAAACGTATAGAATCGGTGGTACTCAATTACATTAATTTTGTGCATTTGTTTGTGAGCATCGATTGTCACCAAGCACCGGAAAAACACCTGTGCTCATCATAGATTGATTTGGACTCCTCCTTATTCGATGCTATAGTAGAGCCTAACCACTATAAGGAAAGTGGTGAAACAATACAAAGTAAAGTAGGTAGTACGTATCATTAATCGATAAATAACGAAGTGTAAATGTGATAATAATATTCTCCAAACTCCCATGAGTCAATCTGTTATTTCAGAGGGTTTGCTTAGATGTACAAAATTTTTTGCAGACAAACTCATAGAAAATAGAGAAAAGGAATTACAAGAATAATTCTCGAAACAACGAATTCCCCTAAAATGGTGGGGGAGGGGCGGGGTGTAGGGGGGGGGGTGTTTAAATGTTTTAAGAATGCGATAACTTTTTTCTACTTGTTATTTTTTGAATCAGAAAAAGAAGGCGGAGGTACCAACTAATCCGGTGATCATTATTATTATGGCAAGGGTGACTGGGGGGGGGAGGGACTTGTCGCCTTAACTGTCACTTCTTGCTAGTTAATATCACCTGCTACATATGTTTCAAAGAAGACTCGACATGTTGTGATTGTAGTAATCGATAAAAGTGGTATAAAAAGTCTCACATGGCCTTGATAGAGAATGAGTTGATTGTTATAATACATATTCCAATGGTTCATTGATAGTAATTTTAATATTGGGGGCTACAATTTAATTTGGGGGGGTAGGGAGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGAGGGGGGGGCAGAGAGGGGTGGGGTATATTGCGCCTGATAATATATTGTATAACATTGTGGGGGTATCCTTTCACAATGTTATAAAATTTATT
Unaligned ( gi|9 ): GATGTCAAATTGGACGAATGTAAAGTGACAGAATACATCTCCGATCTCGTAGTATCGTTATTACAGAGGGTTAGCAGATGTACAAAAAAAATTTGCAGACACACTATAGAAAAAAAAAAGAGTTAAAAGAATATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATCAGTTTTAAGATATTTTTTGCTATATAACTCCCTTCTGTCAGAAAAAGGCGAAGGTACAACTAATCCGGTGATCTAATTTTTATTATACCTATATATGGAAGAAGAATGCCCTTTGCTAGAGGGGGAACATTAGGCCTGCCACTTCTTGTCATTATAGTATTATTGTTATAATTCATAAAAAAAAGTATCCATGTACTTGATGAGAAATGAATATGATTATATAGATTTATCCTGTGTTGATTTTTGGAAGCTACAAGTTCAATTTTGTTGTTGAGGGGGAGGGGGTGTTAACATGCTCTGTAGAATCATATGTCTGGTGGTTACTTTTCACAATGTCCTATAAATGAGGAAACATGAAAACTAGTGTAGTGTCCCATCCCAACTGATCAAAATGCCCTAGGATGCCATGCTAAAGTCCCCATTTTAAAGAGTTTGCGCACATGGATAACAACAAAGTGAACTACATATAGCATTTCTGTGATGCATTTAAGTGAGTCTTGCGTTTTGTATTATAAATTGTATGCTGGATTCAACCGACTTGAAATATTGGTAGTATAAACAAAGAAGTTGGAAGCACTGGTTAGCTGATCCTGACAAAGTATTTTAGTATA
Unaligned ( gi|10 ): AAGTGTGTGTGTGGGGGTGGGGTGGGGGGTTGATACTACTCGCCCGTATATAAACTGCTTTATGTTTCGAGAGAATTCGTATACTTTTTAATGTTTAATCATGTAAGAACGTCTCATGGCCTTAATAAGAATGAATTGATTGTAAAAATCATTCTGTGATAAATACAATTGTTGAGGAGTACAAATATTCTTACAGACATCTATTCTGTAGGTACTTTTCACATATTTACAAAATTTTGTTTGAGTGGATGATGAAAACTGTAGGAGTGTCCAGTCCACTGAAATGCCAATTGAGGATCCATGCCACAGTCATTTGAAGAACTTGCATTTACTATGAAATATTGTAATGGACACAACAGAAGAGGCACTATGTCCAAATGGACATAAACGGCCAGTCCATGCCGTACAGTAATTACAAGGGTCGCCATTTAGAAAAGACTTTAATATGCGTTGTGCTAATGCAGCTCTTGTGTTTGGTTCCAAAGTGTATGCTGGATTCAACACGGACTTGGCAATTGTGGCAATAGAGAAGTTCAAGCTGGTGCTATGGTCCTGACATTAAAAGGATTTTACTAAGTATATTCAAGATAAACTTACAAATGGCATGCCGCTTTTGTCCAACACTTTCTTGCAAATAAAAGAGCATGCACAACTTTGCTACAAACTTTTCAGAAACAGAATACATGTACTCTGTTGGATAAGCAAACAATACAAAAATTTTATTTGAAATTCATATTCCATCAC
Unaligned ( gi|20 ): ATAATTTTATTTTATTTTTTTTTAGCCAAATTCCATTGGACACAGTACAGATATCAATCTATTAAAGAATCCGAGCTTTGTGTGGCCTATATAAATCTGCTTGCTCTCATTTTGAAAGAGATTGCAGACAAGCATGACATTGAAGATCTTACAAACTCAGTAGATTTTAAATTGCACATAGTCATACATTGTGCATGTATATCTCAAATCTGCACAAATTGGTCACTTCAAAATTCTATATATTATAAAAAAAATATTTCTTAAGTTAAAATAGTAAATACCAT
Unaligned ( gi|21 ): ATAGGGTCTGTAAGTCTCGTTTAGTTTCACGTTTCGCTTTCACTACTTCGCGGGTACATCAACGTATGGAAATTGTACTATTCACAACGTTGAATCGGTCCAATACATTAATTTTTGCTTGTTTGCAATTCGGAATGTAGCACACAAAGACCGGGAAAACCTTGCCTCATAGGTTTGATATTGGATTCCCTATCGATGCTAAGTAGGCCTAAACCTAAGGAAGCGGTAATACAAAGTAAAGTAGGTATCGATCATTAATCGATAACTAATGAATGTAAG
Unaligned ( gi|25 ): ATATGGTCTGTAAGTCTCGTTTAGTTTCACTTTCACTTTTACTACCTCCGGGTACATCAACGTATGGAACATATACTATCACAATGTTGAATTGGTCCCAATACATAATTTTGTGCGTTGTTTTGCAATCGGATGTACACAAAAGACAATGGGAAAACCCTGCCTCATAGTTGATTCGGATTCCCTATCGATGCTAACTATAAGGAAGATGTGAATACAAAGT
Unaligned ( gi|26 ): AGTACAATCATAATCGATGAATGATGTCGAATTGGACGAATGTAAAGTGACAGAATATATCTCCGAACTCGTAGTATCGTTATTTCAGAGTGTTAGCAGATGTACAAACATTTTTGCAGACAAACTATAGAAAGATTTTTTTTAAAAAGAATATTGACTAAGAATTTCCTAAATAAGGGGTGGGGGCGGGTCGGTTTTG
Unaligned ( gi|31 ): GTACATATCTTGAATCTATACATATTATTTCTGGAGAGAAAAAAAGGTAAATATAGTAAATACCATACATGTTTACATATATATTTTTTTATTATTTACAAATTTAAATCAATCTTATTCTGAT
Unaligned ( gi|32 ): TGTAAAGGTTCATTGAAAACTATGAAAAATTGTCAAAGATATTTATTAATAGACCACAAGTCATTGATTACACAACTTTGAACATGATGCGAGATGCACCAGTAATATCACAATAAAGTACA
Unaligned ( gi|36 ): GTATATTTAACAACCTTCCAAATGGCTTAACACTTAATAGCCCACCCTATCCTTTCTTACAATCAAATCCCACTTCACAAATGAGGAAGCACAACTTTGTTATAGAAAT
Unaligned ( gi|37 ): TTTGCAATCGGATGTACACACAAGACTTGGGAAACCCTACCTGATAATTAATTTGGATTGCCTATCGGTGCTAGGTATTCCTAAAGGAAGCGGTGAATACAAAGTTAA
Unaligned ( gi|38 ): TATTTATTTATCTTTATTTTTTTTTTTACAAATTAATCAATCTTATTCTGATTGTTTTTAATCTGCATTACCTAACAAAAATATCTAAAACCATTTTCTAGCAA
Unaligned ( gi|39 ): ATAGGGTATATAAGTCTCGACTTAGTTTCACCTTCACTTTTACTATTTCCGGGTACATCAACGGTATCAAAAATATGTATACTATTCCAAAACGTTGTAATC
Unaligned ( gi|40 ): ATTTTTATTATTTCTCTATATGGAAGAAAAATGCCCTTGCTAGAGAGAGAGAGAGAGGGGGGGGAGCTTGCACCTAGACTGCCACTTCTTGCTAGTATAAAC
Unaligned ( gi|41 ): TTGCAAACTGGTGCTAATCCTAACAGACAAGCAATTTAGTATATTTGACAAACTTTCAAATTGCATGACACTTAACATGTCACTCTTTCTTACAAATTC
Unaligned ( gi|42 ): AATATCGACAACGAATTCCCTAAATGGGGGAGGGGTTAAGTTTTAAGATACCATTTTTTTTCTGTATTTGTCAGAAAAAGGCGGAGGTACAACTAATC
Unaligned ( gi|44 ): GGGGGGGGGGGGGGGGGGGGGGCTGTTTTTGCCTTTAAAAACAAACTTTAATTTTCAT
Unaligned ( gi|45 ): GTAATGATTGCAAATTGTCTCTTAATCACATGACGAGACTTACAGACCCTATA
Unaligned ( gi|46 ): AAACAATCTCGCTATATCTCATCAATCATGTGACTAGGCTTACAGGCCCAAT
Unaligned ( gi|47 ): ATAGGGTCTGTAAGTCTCGTGTAGTTTCACTTTCGCTTTTACTACTTCCGG
Unaligned ( gi|49 ): AATAGGGTCTGTAAGTCTCGTTTAGTTT
Alignments
lowQualScore : 11 222222222222 1111 7777777777777777777777777777777777777777777777777777777777777 1 1 1 1 1111 1 1 1 1 33333333333333 33333333333333333333 222222222 11 11111 11 444444444444444444 1111 7777777777777777777777777777777777 11111 1 1 1 111 1 1 111 1 1111 111 444444444444444 1 11 11 1 11 111 111 1 111111 11111 4444444 11111 111 1111 11 111 333333 222222 111111111 22222222 111 11 11 222222 1 11 111 2222 111 11 1111 222222 1 2 22222222222222222222 1111111111 44444444444444444444444444 11111111111111111111111111111111111111111
lowQualScore : 1 9999 4 4 1 4 00 111111111111 66 1 3333 7777777777777777777777777777777777777777777777777777777777777 3 88 8 4 66 3 99 3 5 5 6 6 2 5 5 3 0 8 2 5 2222 4 8 5 3 5 3 99999999999999 5 4 77777777777777777777 77 777777777 00 5 7 88888 66 5 00 2 333333333333333333 5 6 7 4444 99 2222222222222222222222222222222222 66666 6 6 3 7 6 3 88 3 3 6 777 99 0 3 9 000 3 9 1 0 4444 111 6 111111111111111 6 6 9 0 6 7 6 5 88 55 6 3 6 3 3 88 8 444 0 8 8 5 6 7 7 777 5 3 99 6 888 1 6 1 6 999999 33333 0000000 77777 555 6 4444 55 99 99 3 99 6 6 3 111 3 1 6 6 7 7 6 99 6 222222 5 0 222222 666666666 66666666 000 5 6 5 33 5 5 0 6 6 6 6 77 1 99 5 66 666666 0 888 5 5 0 7777 5 99 4 66 00 555 2222 8 4 4 222 11 5 5 5 4 66 4 4 55 55 55 3 0000 44 3 44 333333 3 0 77 3 44 44 0 555 6 3 8888 3 44 3 44 66666666666666666666 9999999999 6666666666 3 33333333333333333333333333 6 3 4 2 22222222222222222222222222222222222222222 2 2 2 33 33 2 5 5 3 2 2
lowQualScore : . .... . . . . .. ............ .. . .... ............................................................. . .. . . .. . .. . . . . . . . . . . . . . .... . . . . . . .............. . . .................... .. ......... .. . . ..... .. . .. . .................. . . . .... .. .................................. ..... . . . . . . .. . . . ... .. . . . ... . . . . .... ... . ............... . . . . . . . . .. .. . . . . . .. . ... . . . . . . . ... . . .. . ... . . . . ...... ..... ....... ..... ... . .... .. .. .. . .. . . . ... . . . . . . . .. . ...... . . ...... ......... ........ ... . . . .. . . . . . . . .. . .. . .. ...... . ... . . . .... . .. . .. .. ... .... . . . ... .. . . . . .. . . .. .. .. . .... .. . .. ...... . . .. . .. .. . ... . . .... . .. . .. .................... .......... .......... . .......................... . . . . ......................................... . . . .. .. . . . . . .
lowQualScore : 0 4444 4 4 9 7 66 333333333333 11 1 6666 6666666666666666666666666666666666666666666666666666666666666 3 44 9 4 11 3 22 3 0 0 2 2 5 0 0 1 0 5 5 0 6666 1 4 4 3 5 3 22222222222222 7 3 00000000000000000000 99 000000000 11 7 0 00000 11 7 77 7 111111111111111111 7 7 3 2222 22 8888888888888888888888888888888888 77777 7 7 3 3 7 3 33 3 5 7 222 22 8 3 8 888 5 8 3 1 2222 777 7 777777777777777 7 7 8 6 7 3 7 0 33 88 7 3 7 2 2 88 0 888 8 0 0 0 7 3 3 888 5 3 22 7 333 7 7 0 7 222222 77777 0000000 11111 777 7 2222 88 22 22 7 22 7 7 2 777 5 0 7 7 3 3 7 22 7 333333 7 7 111111 000000000 44444444 000 7 6 7 66 7 7 7 7 7 7 7 99 4 00 0 99 999999 0 888 0 0 1 0000 0 22 4 11 66 777 4444 9 4 4 222 99 0 0 0 4 11 4 0 55 55 55 3 4444 66 3 66 888888 3 0 99 3 66 66 0 888 7 3 7777 1 22 1 22 88888888888888888888 2222222222 5555555555 1 77777777777777777777777777 2 1 5 9 11111111111111111111111111111111111111111 5 5 5 44 77 7 3 3 6 9 9
consensus : NNNNNNNNNNNNNNNNNTANTAATTTATGA----T-CAG-TTGATGGAATT--GACAGAATTTTA---C-TGAGC--ATTATA--AAGAC-TG-CAAAA----------CT---TT----TA-----------AAC---TT-T--GAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGAT-CAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCAACGA-GAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G--TGTCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-GGTAATA--------------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TTAATACA-ATATTTCA---A-TAAAAC-CTACA-ATATACGAT-------------TA---CAAC-TGCTTT-GATCAGTGAATAAAG----TATT--ACTGC------------------A--------TAT----CAT-----ACTTA-TTTTGAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CA-TTATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCT-GTTAATTC-CTTCATG-GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTAAATC--TAT-TTA-T-AATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TATTT-------TTTTTAAATAAAAAAATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAATAAA--TACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCCT---ATTAACACA-AANCA-TGCC--GA-TGCATAAA-CCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-A-TACAGAAAAACG--CATTATATGCATGTAT-CTAG--CTAAT------AGAT-A---ACG-TCT-ATA--C-CAA-CCTA-TATT-CCGC--ATTTCCTC--GTGTATG-CACTGATGGT--TATTACACG-CAATTCG-CC-AAA---GGG--TAG-CGA-TT-AA-CCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
Reference ( family-506 ) : NNNNNNNNNNNNNNNNNTANTAATTTATGA----T-CAG-TTGATGGAATT--GACAGAATTTTA---C-TGAGC--ATTATA--AAGAC-TG-CAAAA----------CT---TT----TA-----------AAC---TT-T--GAT---------TC-ACA-TTGAAAAA-GT-TT--GTTGAT-CAGAA-TACA-TCTTTTTCACT-GTG-AACTAATTGAGCGTCAACGA-GAGTCCA-CACTAGTT-AGTAAATCGCAACACTGA-G--TGTCTTTCGGGTGTTGTAGTCC-TTGAAATCAGAT-GGTAATA--------------TGAGGTG-AAGCGAACCATCC--C-T-GA-AT---T-----CACATTCTAAAATGG--AAAA--GCA---TTAATACA-ATATTTCA---A-TAAAAC-CTACA-ATATACGAT-------------TA---CAAC-TGCTTT-GATCAGTGAATAAAG----TATT--ACTGC------------------A--------TAT----CAT-----ACTTA-TTTTGAAA-TAAATGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGT-A-AATAA-CA-TTATT--AACACCTTTACTA-TAAAACCCTG-AATAGTGCTTGCATTTCATTCATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGG--CTGTTACA-TTGCAGATGCT-GTTAATTC-CTTCATG-GTTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TCCAA-TTACAGTTGCATTTTACTTCAGTTTTTACTTCCCTCCTTTAGATCTGAAAAAAAAATTNAATC--TAT-TTA-T-AATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TATTT-------TTTTTAAATAAAAAAATAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCC--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAATAAA--TACGATTG-TGCACT-ACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCCT---ATTAACACA-AANCA-TGCC--GA-TGCATAAA-CCTTGTCTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-A-TACAGAAAAACG--CATTATATGCATGTAT-CTAG--CTAAT------AGAT-A---ACG-TCT-ATA--C-CAA-CCTA-TATT-CCGC--ATTTCCTC--GTGTATG-CACTGATGGT--TATTACACG-CAATTCG-CC-AAA---GGG--TAG-CGA-TT-AA-CCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-A---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATNTCTCG-T-GAATCACAT
gi|1 : AATTTATAA----T-CAG-TTG-TGGAATT--GACAGAATTTTA---C-TGAGCC-ATTATA--AAGAC-TGGCAAAA----------TA---AT----AA-----------AA-----T-T--GAT---------TC-ACACTTGAAAAA-GT-TT--GTTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGT-AACGA-GAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G--T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGATTGGTAATA--------------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TTAATACA-ATATTGCA---AGTAACAC-CTACA-ATATATGAT--------------A---CAAC-TGCTTT-GACCAG--AATAAAG----TATT--ACTGC------------------A--------TAT----CAT-----ACTTA-TTTTGAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGT-ATAATAA-CA-T-ATT--AAAAC-TTTACTA-TAAA--CCTG-AATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTCAATC-TCAAACAAT-A-TTT--AGTGAAACTGGCACCATGG--CTGTTACA-TTGCAGATGCTCGTTAATTC-
gi|11 : aattatatctccaaactcatagtatctttatttcagagggtttgcagagtgtacaaaacttttgcagacaatttatagaaataagaaggaattcaaagaatatcgacaagcgcaattccctaaatggggggggggggggagggggggggttaattaagataacattttttttcttctgtatttgtcagaaagaaagcggaaggtcaactaaccgtgatcttattattagggggggggggggggggggggggggggcttgcgccttagactgtcactttcttgctagttataaactgctacatgtttcaagaagactcttacatgttgtattgtataatcgtataaaagagtgtaaaaagtaatcacatggcctttgagagaatgagttgattgtataaacctttatcctgtgtttcaattgaatttttttgggggctacatttaatttggggggggtatatgggcctgtaatattgtatatcatgtgaggtatgctgtcacatgtttataaaatttttattgaagggatcactgaattaattcggaagtgtcctagcacacgagatgttcctcacaagtcatgtaagaatttacggatggatctacaacaagtgactaatttaatgtcatttgtgatgcacttacattattttaaaagtgcaactcttgtgtgtattgctgagttcatccgactccgacaatttgtgagcatagcagaagtttcgcaaactgtgcgtcctgacaatcaataattatgtatatttgacaaacttttcaaatcggataacgcttaatatgtcccactttttactatcaactttcgataaaatccaaattttgaaaaaagagcatgcacaacttcatataaaaattggcattattaggattaggcaaataaaaagaatgcatgaaatgtagaacatattccttcacattctataaaaatttctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatacgatatcaaatcaaaatattctggaccagcttatgtggcacatgtgaaatatgctgtccccttttgacggtttggcagatccagcatcacattcgaagatttaacacagttgtaaacacatattcatgtcatatgcttgaatctatacatattatttttggagaaaaataggtaaaaatacttatactaaatacctacattgtttgcatatatttttttatttattttttttttttacaaatttaaatcaatctattcttagattgtttttaaattgcagttactaaacaaaaaatctacatccatttctctagcaaattgtatgttatttaaagattttttgtaatagtgaaactgaagaaaacttgtcaaacacatactcttagttatcaccatgtcattacgacgctgttcaacatgattgcaaggtgctcacgattacgtaatattacaaataaagtacatgcatattttggatctgtgtttgtgttaTGGGA-TGGCTGT-T--ACTTA--GGATGTTTTTG-TCCAA-TTACAGTTGCATTT-ACTTCAGTTTTTACTTCC-TCCTT-AG-TCTGAAAAAAAA-TTAAATC--TATATTA-TTAATATCAC-TGTTAGCAATAGCGACTTGATT------TAT---TATATTTAT-----TTTTTAAAGAAAATAATAAA----TGAAAAA--TG-TGA----CTAC-TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCAT-GTG-GAAATAAAAATACGATT--TGCACTCACTCACACTGCAGGTATAT-AACCCCCCA-----CCCCCCCCCTCCCCGAAGAACGT--------GCCTTTTATTAACACA-AATCA-TGCC--GA-TCCATAAAACCTTGTCT-GTTTTCAATAAAGCCATAAATTG-AACTTTATAGATATG-AG-AATCAAGAAAAACGGCCATTAT--GCATGTATTCTAA--CTAAT------AGAT-A---ACGGTCT-ATA--C-CAAACCTA-TATTTCCGC--ATTTCCTCC-GTGTATGGCACTGATG----TATTACACGGCAATTCG-CC-AAA---GGG--TAG-CGAATT-AAACCTTCTGCA--TCTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG-------TT-ATCTGT-G--GTTAA-T--C--CTTTAA---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------A----CTATCTT------C---ATC---------CA-CTAC-TGCA--------T-CA---T----C-T-CC-GGGT-C--A-C---CC---------G------A-------T------GT-A--CCGGA-AGT--AAA--CAAAT-CAC--TCATTTCTC
gi|12 : TTTATGA----T-CAG-TTGATGAATTT--GACAGAATTTAA---C-T---CTTATTATATAAAGAC-----ATAA----------TT---TT------------------AC---TT-TATGAT------------AAA-T--AAAAA-GT-TT--GTTGAT-CAGA--TACA-TATTTTTCACT-GTA-AACTAATTGAGCGACAATGA-GAGT-CA-TA----TT-AGTAAATCGCAACACTGG-G--TGTC
gi|13 : tagatattaaaatattcaaagtctgtgtggtccatgtgtatacgctactccacttttgaagcagtttgcagatgaacatcacattgaagatcttattaactcagtatatttacatgctatcaggctatcagcatatattcatgtatatcttgaatctgccacttccaaactctacatattatttttgaagtcaatgttaaataccatacatgtttgcaatttttttttacaaatttaaatttcctacaatttttaaatctgcattacctaacaaaaatatctaaaatccgtttctttagcaaatgcatattatttaattatttttgcaaagctggacactatgtctatacatgttaaaagttcattcaaaactatgaaaaactgtcaaaaatatttattaatagcccacatgtcattacacaactttgaacatgttgcaagatgcaccagtaatatcacaattaagtacatgtatattcggatctgtgtttgtgTTATAA----T-CAG-TTAATAGATTT--GAAAGGGTTTTA---CATG--C--ATTGTA--AATAC-TG-CGAAA----------CTACTCT----TA-------------C---TT-T--GATAAAATTCTATT-ACA-TGTAAAAT-GT-TT--GCTGAT-CAGAA-TCCA-TCTTTTT
gi|14 : acatattccatcacagtatacatgtcaaactattcgaactttatgtggcctatgtgaatttgctactcattacagataattatgagaatgaagatcgtgcggactcagtagatcaattgtacctaaatgtatatcttgaatctgcccaaatttaacaatattgaacctctacatgttatttttaaagttaatagctataaatatcatacacgttacatatggtttttttttatttttaatcatttaagctttttgttctgattcagagtgttttcaaatatgcataaattacacaatatatttaaaatatatatctcgctagcatatgtatgttgtttaatgagttttgtttttggtaaagctggacactatggctatgcctatgcatctataggttaatcaaaaactatgtcaaaaatgtttattaatatttgtagcaacatgtaattacgtagcttcgaacatgttgaaagctgcatcattaatgtcataataaagtacatgtagttttgattctgtgtgtgtatttaAAATAAA-----AAAAA---TA-TGA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAC---GAATT-TT-CAATGCATTT-GTCC-TTGTA-AAAATAAA--TATGATTG-TGCACT----------GCAGGTAAAG-TACCCACC------CCCTCC--------TCTGAACGT--------GTCT---ATTTACACA-AAGCA-TGTC--TA-TGGATACA-CCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTG-GGAA-TACATAAATACG--TATTATATGCATGTAT-CTAG--CTCAT------AGATAA---ACG-TCT-ATA--C-CAA-CCT--CATC-CCGC--ATTTCCTC--GTGTA---CACTGGTGGTTATATTACACG-CAATTCG-TCAAAA---GGG--TAG-CTA-TT-AA-CCTTCTTCG--ACTT-T-TCT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGTGG--TTAAA-T--C--CTCCAA---A-T-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------C---AT----------CA-TTA--------------------------C-T-CCTGGGT-CATA-C---CC---------GATTGTCA-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTTATATCTCG-T-AAGTCACAT
gi|15 : AATAAA-----AAAAA---TA-TGA----CAA--TTG--TA--GTC--CAACATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAC---G-A-T-TT-CAATGCATTT-GTCC-TTGTA-AAAATAA---TATGATTG-TGCACT----------GCAGGTAAAG-TACCCACC------CCCTCCTT-----------ACGT--------GTCT---ATTTACACA-AGAAG-TTCTAGGA-TAC------CCTTCTCTTGTTTTCAATTAAGCCATAATTTA-AACTTTAATGATTTG-GG-A-TAC-TAAATACG--TATTATA-GCATTTAT-CTAG--CTCAT------AGATAA---ACG-TCT-ATA--C-CAA-CCT--CATC-CCCG--ATTTCCTC--GTGTA---CACTGGTGTTA-TATTACACG-CAATTCG-TC-AAA---AGG--TAG-CTA-TT-AA-CCTTCTTCG--ACTT-TCTTT--A--CT--GC-TT----CA--A-GTTTCA--TA------TTT-GTATGT-GGTTTAAA-T--C--CTCA-A---A-TCA--A-CA-GAT-AT-AAC--GC-TA--TA---------------T----CTATC-T------C---AT----------CATCTA--------------------------C-T-CCTGGGT-CATA-C---CC---------G------A-------TTGTCTAGT-AC-CCGGA-AGT---AA--C-AAT-CACAGTTAT---TCG-T-AAGTCACATgacgagacttacagaccctatt
gi|16 : AAAATTATAATT----AGC---ATAGA-TAAACTCTTCATTTCACAATGTTGA-CTTACCAAGAGCTAAATCC-TAACTTGTTgacgagacttacagaccctat
gi|16 : ATC-TCAAACAATAA-TTTCAAGTGAAACTG-TA--ATGG--CC--------TGC---TGCA-GTTAATTC-CTTCATA-GTTGTTGGGA-TGGCTGTGTCGACTTG--GGATGTTTC-G-TCAAA-TTACAGTTGCATTTTACATCAG-TTTTACATGCCTCC-TTAGATCTGAAAAAAAA----GACC--AAT-TTA-T-AATATCAC-TATTAACAATAAC-ACTTGATCTTTTTATAT---A-TATTT-------TTTTTAAATCAAAAcgcatacctctttagttttcagtgttgtagctgaaaatgggcactttatctcaaacaataatttcaagtgaaactgtaatggcctgctgcagttaattccttcatagttgttgggatggctgtgtcgacttgggatgtttcgtcaaattacagttgcattttacatcagttttacatgcctccttagatctgaaaaaaaagaccaatttataatatcactattaacaataacacttgatctttttatatatattttttttaaatcaaaatcaa
gi|17 : aaaattataattagcatagataaactcttcatttcacaatgttgacttaccaagagctaaatcctaacttgttcgcatacctctttagttttcagtgttgtagctgaaaatgggcactttTTCATAA----TTCAG-TTGATGAAATT--GAAAGAATTTC----C-TG-GT--ATTATA--AATTT-TG-CAAAA----------AT---AT----TATGT--------AGTGTATG-T--GATAAAACTACACC-ACACTT---AAA-CT-TTGCGTTGAC-TAGAA-TGCA-TCTTTGTAAAT-ATA-GACTACTTCAATGCCCGCAG-GAGTACA-CAC----T-AGTAAA--GC--------------TCTTTCCGGCGCGGTTGTCC-TTG-AATCTGAT-GTCAATAATCATACTGCGGTTTGA-GTG-AAGAAAGTCATCC--C-T-TACATACATGCAAACACATTCTAAAATGA--CAA-----A---TTA--ACG-GCATTCC----------AT-CTACATATATACTAT-------------TAAATCAAC-tcaa
gi|18 : CATGTAT-CTAG--CTAGT------AAAT-AGTTACG-TCT-AGATTC-CAA-CC-A-TATT-CCAC--ATTTCCTC--GTGTATG-CACTGATGGT--TATTACACG-CAATTCG-CC-AAAG--GGG--TAG-CGA-TT-AA-CCTTCTGCA--ACTT-T-CCT--A--CT--GC-TT----CA--A-TTTTCA--TA------TTT-ATCTGTGG--TTTGT-T--C--CTTTAA---A-T-A--A-CACAATGAT-AAT--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTA--------------------------C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAC-CCC-GCCATTTCTCG-T-GAATCACAT
gi|19 : cTTTATGA----T-CAG-TTGATG-AATTTTGACAGAATCTTAACTC-TTATT--AT-ATA--AAGACAT----AAT----------CT---TT----TA-----------CGT---TTAT--GAT------------AAA-T--AAAAA-GTATT--GTTGATTCAGA--TACAGTATATTTCACTAGTA-AACTA-TTGAGCGACAATGA-GAGTC-------AATT-AGTAAATCGCAACACTGG-GGATGTCTTTTGGA-GTTGTTGTCgacgagacttacagaccct
gi|2 : ccaccatgtattacacaacacctgtgaacatgttgcaagatgcaccagtaatatcacaattagtacatttgtatatctcgattctgtgttttgtgT-C--A-CG--TT---------G------A-------T------GT-AC-CCGGA-AGT--A
gi|22 : atagggtctgtaagtctcgttagtttcactttcgcttttacG-AGGCAAACCATCC--CCT-GA-GT---------CACATTTTAAAACGG--CGAA---TG---TCATTACACGTATTTTATTTG-TA------TACA--TATACGATATTATTTACTTTATA---TAAC-TGCTTT-GATCAGTGGTGAAAG----TATTTTACTAC------------------AAGTACAAATAT-----AT-----ACTTA-TTTTGACA-TAGAT-T-CAG-CGGTATTCAAAACTTGATG-CAAGT-AAATTTTA--TG--A-AAAAA-AA-----T--AACA-GTTCACTG-TAAAGCCC-A-AGTAGTGCTGGCA-TTCATCCATAGA---CTATCAAAGT-TTACAAacttgtactatacaaacgttgaatggttccaaatacataattttgtgcatgtttttgcaatcggatgtacacacaagaccgggaaaaccctcctcatagttgatttggattccctatcgatgctaagtaggctaacccttaaggaagcggtgaatacaaagtaaagtaggtaagtacgatcataatcgataaataaaatgtaaagtgatattaaatatatctccgaactcatagtatctttatttcagaggtttgcagatgtacaaaatttttgcagacaaactatagaaataagaaaaggaattaaaagaatatcgacaacgaattccctaaatggggggggggggttaagttttttaagataacattttttttctgtatttgtcagaaaaaaggcggaggtacaactaatcgcggtgatcttattattaggaagggtgctggggggggggggtattgcgcctagactgtcacttcttgctacatgagtataaactagctacatgtttcaagaagactcttacatgttgtatgtattcgtataatgtataaaaagtctcatatggcttgatgagaatagttgatgtatacttcctgtgttcaattgattttttttggggcacaattaattttggggtggggagtgggggggggggggtatattgcgcctgtaaatattgtatacatgggtatctttcacatgtttaaaatttttattgagggatcatgaaacttggatgtccagcaactgaaatgccatgatccatgccaagtcatttgagaaatttacgatggatacaacaaagtgcctaatttaatgtcattatggatgcacttaattataagtgcaactcttggtggtatgctgaattcatccgactcgacaattgtagcatagcaaagaagttgcaaactggtgctgatcctgacaaagttttagtatttttgacaaatttcaatggcataacacttaatatgtcacttttaatactttcgaataaatccaaaattgaaaagacatgcacaacttcattataaattggcattttagtataggaaataaaagaatgcatgaatgtagacatattcttcacatttctataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcagtatagatatcaaaatcaatattctggacccagctttattggcacatgtgaatatgttgctcccttgaaggagtttcagatgcagcatcacattcaagatcttaacacagttacacatattctgtacatatcttgaatctatcatattatttttggagaaagaaggtaaatcatgtatactaaataccatacatgtttggcatattattttttttttatttctttatttattttatttttttagcactttttaaatcaatcttattctgattgttttttaaatctgcattactagacaaaaatatctaaaatccattctctagcaattatgttatttaaaggattttttgtaaagttgacactatgtctatacagtaaaaggttcacttgaaaactatgaaaaaactgtcaaaaaattatttattatagccacatgtcattacacagctttgaacatttgcaagatgcccattacgtaatat
gi|23 : TA-TATT-CCGTCAATTTCCTCTCGTGTAT--CACTGATG-T--TAT-ACACG-CATTTCG-CC-AAATGTAGG--TAGTCGA-----A-CCT-CTGCATAACTT-T-TCT--ATACT--GC-TTT---CA--A-TTT-CA--TG------TTT-ATCTGT-G--GTAAAAT--C--CTTTTA---A-T-ATTG-CACAAT-AT-CAC--GC-AA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--ACC---CC---------A------A-------T------G--ACACCGGA-AGTAGAAA--C-AAT-CAC--TCATC---CGAT-GAATCACAggaata
gi|24 : ctaA-CCTTCTGCA--ACCT-T-TCT--A--CTAAGC-TTATTTCAGAA-TTTTCAAATG------TT--AT-TGT-GG-TTAAA-TATCAACTTT-A---A-T-A--G-CACAATGAT-GAC--GC-TA--CACGTGCCATAGGGTGGT----CCACCTTATTCCAC---ATCTAATCTTATCA-CTACTT-CAATTAAATGT-CATAGT----CCT-TCTGGGT-C----CTCACC---------G------A-------T------GTAAC-CCGG--AGT--AAA--C-AAG-CACTGTCATTTCTCG-T-GAATCACATgacgaacttaccagacccta
gi|27 : tag-TTT--A--CT--GC-TT----CA--A-TTTTAA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTCTCA---A-T-A-----ACAATGAT-AACACGC-TA--TA---------------T----CTCTCTT------T---AT----------CG-CTAC-T-CC--------T-GG--GT----CATACCCGAGT-G--------TC---------G------A-------T------GT-AC-CCGAA-AGC--AAA--C-AAT-CAC-GCTATATTTCG-T-CAATCACATgacgagacttacagactccta
gi|28 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTAAA-T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA---------------GGGT-T--A-C---ACACGAGAATGG------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAG-CAT-GTTTTATCTCG-T-AAATCATATgacgaaacttacagacccta
gi|29 : -TT----CA--A-TTTGCA--TGCATATGTTT-ATCTGT-G--TTA---T--C--CTCT-A---AAT-A--A-CACAATGAT-AAC--GC-TA--TA---------------T----CTATCTT------T---AT----------CA-CTAC-T-C-----------CA--G--------------GTAC--A-C---AC---------G------AGAATGGAT------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttacagacccta
gi|3 : TAGTAATTTATGA----T-TAGGTTGATGGAAT---GACA-AATTTTAG--C-TGAGC--ATTATA--AAGAC-TG-CAAAAAAATACGTTACT---TTATAATA-----------AAC---TT-T--GAT---------TC-ACA-TTGAAAAAAGT-TT--GTTGAT-CAGAT-GACA-TCTTTT-CACT-GTG-AAATAATTGAGTGTCAACGA-A--TCCA-AACTAGTT-AGTAAATCACAA-A-TGATG--TGTCTTTCGGGTGTTGTAGTCC-TTGAA-TCAGAT-GGTAATA--------------TGAGGTG-AAGCGAACCAT-C--A-T-GA-AT---CA----CATATTCTAAAATGG--AAAAT-GCAT--TTAATACA-ATATTTCA---A-TAAAAC-CTACA-AC-TATGATA------------TA---CAAC-TGCTTT-GATCA-TGAATAAGGATAATACA--ACTGCTTTGATCAGGTGAATAAAG--------TATTACGCATACATCACTTATTTTTGAAAGTAAATGTACAA-CTGTATTCAAAAACTGATG-CATGT-ATAGTTTAAGTGTAA-AATAACCATTTATT--AACACCTTTACTATTAAAACCCTGAAATAGTGC-TGCATTTCATTCATAAAATGTTATCATAATATTA-AATA----AGC---ATAGACT---------------CAATGCTGACCTTACCAAGAGCGAAATCCTTAAC-TTTTTTTAAATCTTCAAACAAGAA-TTT-AGGTAAAACTGGCA--ATGGT-CTGTTACA-TTACAGATGCT-GTTAATTC-Cgacgagacttacagacccta
gi|30 : tgtatgctgaattcatccgaactcgacaattgtagcatagcaaagaagttgcaactggtgtgatcctgacaaagttatttaagtatatttgacaaatttctaaatgcataaacttaatatgtcccacttttgatactttcgaataaatccaaaattgaaaagagatgccacaacgttcattattaaaattggcacctattggtaggcaaataaagaatgcagaaatgtagacaaattccttcacattcttataaaattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtatatgatattcaaaacaaaatatttggaccagctttatgtgggcacatgtgaatatgctgctccccttctttgaaggagtttgcaagattcagcatcacatcaaagatcttaacacagtctacacatattcagtacatatctgaaaatctatacctattattttttggagaaagaagtaaatacatgttatactaaaataccatacatgtttgcatatttttttttttttatttattttattttgtttcatcaaatttaaatcaatcttattctgattgttttttacaaatctgcattacctaacaaaaatacaaaatcatttctctagcaaatgtatgcttatttaaatattttttgtaaagcttgacactatgtctatacatgtaaaggttcactgaaaactatgaaaagctgtcaaaaatatttattaatagccaacatgttcattacacagcttgaacatgttgcaagatgcaccagtagtaatatcacaataaagtacatgcatatttggatctgtgtttg-TTACAGTTGCATTTTACTTCAGTTTT-ATTTGCCTCCTT-AGATCTGAAAAAAAA-TGCAATC--TAT-C-----AATGTTACATGT-AGCAATAGC-ACTTGATC------TAT---T-TCTTTCTTTCTTTTTTTAAATAAAAAAATAAA----TGAAAA---g
gi|33 : AGATATGA-CACCACCC------C-CCCCCCC--------GAACGTGCCTATGCGCCT---ATTAATACA-AAGCA-TGCC--TA-TGCATAAA-CCTTCTCTTGTTTTCAATT
gi|34 : ctttcaatgcatttgttcttgtaaaaatAAACG--TATTATATGCATGTAC-CTAG--CTCATTCATGTAGAT-A---ACG-TCT-ATA--T-CGA-CCTT-TATT-CCGC--ATTTCCTC--GTGTA-G--ATTAATGGTTATATTACACG-CAATTCG-AC-AAA---
gi|35 : ACAATGAT-AAT--TC-TATACA---------------TGTAACTATCTT------T---AT----------CA-TTAC-T-CT--------T-GA--GTGACAC-T-CGCGAG--C--G-T---C----------G------A-------T------GT-AC-CCAAA-TGT--AAA--T-AAT-CAC-GCCATATCTCG-T-AAATCA
gi|4 : acaatTGCTAATTTATGA----T-CAG-TTGATGGAATTT-GACAGAATTTTA---C-TGAGC--ATTATA--AAGAC-TG-CAAAAATA-------CT---TT----TACTTTATAATAAAAC---TT-T--GAT---------TCCACA-TTGAAAAAAGT-TT--GTTGAT-CAGAAATACA-TCTTTTCC--T-GTGGAACTA--TGAGTGTCAACGAAGAGTCCATCACTAGTT-AGTAAATCA-AACGCTGA-G--TGTCTTTCGG-TGTTGT-GTCC-TTGAA-TCAGAT-GGTAATA--------------TGAGGTGGAAGCGAACCATCC--C-TTGA-ATA--T-----CACATTCTAAA-TGGCAAAAG--GCAATTTTAA-ACA-ATGTTTCA---A-TAAAAC-CTACA--CATATGAT-------------TA---CAACATGCTTTTGATCAGTGAATAAA-----TATT--ACTGC------------------A--------TA-----CAT-----ACTTA-TTTTGAAA-TAA-TGTACAA-CTGTATTCAAAACTTGATG-CATGT-ATAGTTTAAGTGC-A-AATAA-CA-TTATTAAAACACCTTTACTAGTAAAACCTTG-AATAGTGCTTGCCATTCATTCATAAAA-GTTATCATAATATTATAATA----AGCTAGATAGA-T---------------CAAGTCTGA--TTACCAGAAGCTAAATCC-TAAC-TTTTTTTAAATC-TC-AACAATAATTTTCAGGTGAAACTGGC---ATGGGTCTGTTACA-TTGCAGATGCT-TTTAATTC-CTTCATGAGTTTTTGGGA-TGGCTGTGTCGACATAATGGATG-TTT-G-TCCAATTTACAGTTGCATTTTACTTCAG-TTTTACTTCCCTCCTTTA-ATCTGAAAAAAAAATTTAATCTATAT-TTATT-AATATCAC--GTTAGCAATAGC-ACTTGATC------TATTTAT-TATTT-------TTTTTTAATAAAAAAATAAATTTTTGAAAAATTTGTTGAACCCCTAATTTGGTTAACGCCTTCAGCATAGAACCGTACTATGTA-ACACTTGAAAG--AAAG---GTACT-TT-AAATGCA-TTTGTTCATTGTG-G-AATAAA--TACGATTGTTGCACTCACT-GCACTGGAGGTATAGTTACCCCCCCCCCCGCCCCCCCCCCCCCCTCTGAACG---------GCCT---A-TAAAACACAATCATTGCCT-GA-TGCATAAA-CC-TGTCTTGTTTTCAATTAAGCCATAAATTG-AAC-TTAATGATATGAAA-A-TACAG-AAAACG--CATT-TG-GCATGTAT-CTAGGCCTAAT------TGAT-A---ACG-TCTAATA--CGCAA-CCTATTATT-CCGC--ATTTCCTC--GTGTATG-CACTGAT-GT--TAATACACG-AATTTCG-CC-AAA---GGG--TAG-CGA-TTCAA-CCTTATGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTTAATCTTG-G--TTAAA-T--C--CTTTGA---A-T-A--GTCACAATGATAAAC--GC-TA--CA--------------------CTATCTT------CATAAT----------CA-CTAC-T-CA----------CA--GT----C-C-CCTGGGT-C--A-C---CC---------G------A--------------GT-AC-CCGGATAAT--AAC--A-AAT-CAC-GTCATTTCTCG-T-GAATCACAT
gi|43 : agtacatgcatatttgatctgtgtttg---------G------A-------T------GT-AC-CCTGA-AGT--AAA--C-AAGACAT-GTTTTATCTCG-T-AAATCATATgacgagacttaacagacctat
gi|48 : -AC-CCGAA-AGT--AAAATA-AAT-CTC-GCTATATCTCG-TAAAATCACATgacgagacttacagaccctat
gi|5 : gaAATTTATAA----T-CAG-TTG-TGGAATT--GACAGAATTTTA---C-TGAGCC-ATTATA--AAGAC-TGGCAAAA----------TA---AT----AA-----------AA-----T-T--GAT---------TC-ACACTTGAAAAA-GT-TT--GTTGATTCAGAA-TACAGTCTGTTTCACT-GTG-AACTAATTGAGTGT-AACGA-GAGTCCA-CACTAGTCGAGTAAATC-CAACACTGA-G--T-TCTTGCGGG-GT-GTAGTCCCTTGAAATCAGATTGGTAATA--------------TGAGGTG-AAGCGAAC-ATCCACT-T-GA-AT---T-----CACATTCTAAAATGG--AAAAATGCA---TTAATACA-ATATTGCA---AGTAACAC-CTACA-ATATATGAT--------------A---CAAC-TGCTTT-GACCAG--AATAAAG----TATT--ACTGC------------------A--------TAT----CAT-----ACTTA-TTTTGAAA-TAAATGTACAAACTG-ATTCAAAACTTGATC-AATGTCATAGTTTAAGTGT-ATAATAA-CA-T-ATT--AAAAC-TTTACTA-TAAA--CCTG-AATAGTGCTTGCATTTCAT-CATAAAATGTTATCATAATATTATAATA----AGC---ATAGA-T---------------CAATGCTGA-CTTACCAAGAGCTAAATCC-TAACTTTTTTTTCAATC-TCAAACAAT-A-TTT--AGTGAAACTGGCACCATGG--CTGTTACA-TTGCAGATGCTCGTTAATTCGCTTC-TA-TTTTTTGGGATTGGCTGTGGCGACTT---GGATGTTTT-GTTCCAA-TTACAGTTGCTTTTTA-TTCAGTTTTTATCTCCCTCC-TTAGATCTGAAAAAAAAATTAAATC--TTA-TTA-T-AAT-TCAC-TGTTAG-AATA-C-ACTTGATC------TA----T-TATTTTG-----TTTTTAAATATAAAAATAAA----TG-AAA---TG-TGA----CTA--TTG--TA--G-C--CAGCATAGAATCCTACTATGTATACAC-TGATAGG-AAAGTCTGTACTATTAAAATGCGTTTTGTTCATTGTGTGATATAAA--TATGATTG-TGCACT-ACT-GCACTGCA-GT-TAG-TA----CC------CCCCCCCCTCCCCCTCTGAACGTG-------GCCT---ATTAACACA-AA-CA-TGCC--GATTGCATAAA-ACTTGTCTTGTTTTCAATTAAGCCCAAAATTGAAACTTTAATGATATG-AG-A-ATCAGAAAAACG--CAT--TATGAATGTAT-CTAG--CTAGTTTTTA-AGAT-A---ACG-TCT-A------CAA-CCTA--ATT-CCGC--ATTT-CTC--GTGTATG-CACTGATG----TATTACACGCCAATTCGCCC-AAA---GGGGTTAG-CGA-TT-AA--CTTCTGCA--ACTTAT-TCTTAA--CT--GCTTT----CA--ATTTTTCA--TGTT----TTT-ATCTGTGG--TTAAA-T--C--CTTT-AAAGA-T-A--G-CACAATGAT-AAC--GCTTA--CATT-------------T----CTATCTT------C---A-----------CA-CTA--T-CA--------TCCA--GT----C-T-CT--GGT-C--A-C---CC---------G------A-------T------GT--T-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACAgacg
gi|6 : agtacatgcatattttggatctgtgtttgtgttaTATTACTTTTTGAATAGT-CA--TTGATG----T--GACAGA--TTTA-----TGA----ATTATA--AA--------AAAA----------CT---TT----TA-----------AAC---TT----GAT---------TC-ACA-TTGAAAAA--T-TT---TTGAT-CAGAA-TACA-TCTTTTTCACT-GTG-A-CTAATTGAG-GTCA--GA-GAGTCCA-CACTAGTT-AGTAAATCACAACTATGA-G---GTCTTTCGGGTGTTGTAGTC--TTGAA-TCAGAT-GGTAATA--------------TGAGGT--AAGCGAACCATCC--C-T-GA------T-----CACATTCTAAAATGG--AAAA--GCA---TTAA-ACA-ATGTT-CA---A-TAAAACGCT-CA-ATAT--GAT-------------TA---CAAC-TGCTTT-GATCAGTGAATAAAG----TATT--ACTGC------------------A--------TG-----CAT-----ACTTA-TTTTGAAA-TAAATGTACAA-CTGTATTCAAAACTTGATGGCATGT-ATAGTT-AAGTGT-A-AA-AA-CA-TTATT--AACACCTTTACTA-TAAAACCT---AATAGTG-TTGCATTTCATTCATAAAA-GTTATCATAATATTATAATATTGAAGC---ATAGG-T---------------CAATGCT-A-CTTAC-AAAAGCTAAATCC-TA--CTTTTTTTAAATC-TCAAACAATAA-TTTCAGGTGAAACTGGCA--ATGT--CTGTTACAATTGCAGATGCT-GTTAATTC-CT-CATG--TTTTTGGGA-TGGCTGTGTCGACTTA--GGATGTTTT-G-TC-AA-TTACAGTTGCATTTTACTTCAGTTTT-ACTTCCCTCCT--AGATCTGAAAAAAAAATTAAATC--TAT-TTA-T-AATATCAC-TGTTAGCAATAGC-ACTTGATC------TAT---T-TATTT-------TTTTTAAATAAAAAA-TAAA----TGAAAA---TG-TGA----CTA--TTG--TA--GCT--CAGCATAGAATCCTACTATGTA-ACAC-TGATAGGAAAAG---GTACT-TT-AAATGCGTTTTGTTCATTGTG-GAAATAAA--TACGATTG-TGCACTCACT-GCACTGCAGGTATAG-TACCCCCC------CCCCCCCCCCCCCCTCTGAACGT--------GCCT---AT-AACACA-AATCA-TGCC--GA-TGCATAAA-CCTTG-CTTGTTTTCAATTAAGCCATAAATTG-AACTTTAATGATATG-AG-A-TACAGAAAAACG--CATTAT--GCATGTAT-CTAG--CTAAT------AGAT-A----CG-TCT-ATA--C-CAA-CCTA-TATT-CCGC--ATTTCCTC--GTGTATT-CACTGATGGT--TATTACACG-CAATTCG-CC-AAA---GGGG-TAG-CGA-TT-AA-CCTTCTGCA--ACTT-T-TCT--A--CT--GC-TT----CA--A-TTTTCA--TG------TTT-ATCTGT-G--TTAAA-T--C--CTTT-T---A-T-A--G-CACAATGAT-AAC--GC-TA--CA---------------T----CTATCTT------C---AT----------CA-CTAC-T-CA--------T-CA--GT----C-T-CCTGGGT-C--A-C---CC---------G------A-------T------GT-AC-CCGGA-AGT--AAA--C-AAT-CAC-GTCATTTCTCG-T-GAATCACATgacgagacttacagatt
22 sequences could not be aligned to this reference sequence:
Unaligned ( gi|7 ): TAGACTGCCACTTCTTGCCAGTATAAACTGCTGCATGTTTCAAGAAGACCCTTACATGTTTTATTGTATAATCTTATAAAAAGTCTCACATGGCCTTGATGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAACTGAAATGCCTAGGATCCATGCCAAAGTGGGGGGGTATTGCCCCTGTAAATATTTATGTGGGTACTTTCACATGTTTTAAATTTTTTATTGAAGGGATCATGAAAACTTGGAGTGTCCAGCCAACTGAAATGCCTAGGATCCATGCCAAAGTCATTTGAAGAATTTACGATGGATACAACAAGTGACTAATTTAATGTCATTGTGATGATCAACTCTTGTATGCTGAATTCATCCGACTCGACAATTGTAGCATAGCAAAGAAGTTGCAACTGGTGCTGATCCTGACAAAGTATTTAGTATATTTGAAAATTTTCAAATGGCATAACACTTAATATTCCCCTTTTTAATACTTTCGAATAAATCCAAAATTGAAAAAGAGCATGCACAACTTCATTATGAATTGANNNNNNNNNNNNNNNNNNNNNNNNNGAATTTGACAGAAGCTAGCAGATCGTGTCCTATTTGGATAGGCAAATAACAGAATGCATGAAATGTAGACATAGACATATTCCTTCACATTTCAATAAAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTAGATATCAAATTTATCAAAATATTCCAGCTTTATGTGGCACATGTGAATATGCTGCTCCCCTTTTGAAGGAGTTTGCAGATCAGCATCACATTGAATATACAGTTACACATATTCATGTACATTTCTTGAATCTATACATATTATTTTTGTAGAGAAAAAAGGTAAATACTAAATACCATATATGTTTGC
Unaligned ( gi|8 ): AGTACTGTAGTACTCAGTTTAGTTTCACTATTCGCTTTTACTACTGTTCCCGGGTACATCAACCAGTATGGAACTTGTCTGATCACACATTCATAATACTTTGCCCCTACTAAAATAAACGTATAGAATCGGTGGTACTCAATTACATTAATTTTGTGCATTTGTTTGTGAGCATCGATTGTCACCAAGCACCGGAAAAACACCTGTGCTCATCATAGATTGATTTGGACTCCTCCTTATTCGATGCTATAGTAGAGCCTAACCACTATAAGGAAAGTGGTGAAACAATACAAAGTAAAGTAGGTAGTACGTATCATTAATCGATAAATAACGAAGTGTAAATGTGATAATAATATTCTCCAAACTCCCATGAGTCAATCTGTTATTTCAGAGGGTTTGCTTAGATGTACAAAATTTTTTGCAGACAAACTCATAGAAAATAGAGAAAAGGAATTACAAGAATAATTCTCGAAACAACGAATTCCCCTAAAATGGTGGGGGAGGGGCGGGGTGTAGGGGGGGGGGTGTTTAAATGTTTTAAGAATGCGATAACTTTTTTCTACTTGTTATTTTTTGAATCAGAAAAAGAAGGCGGAGGTACCAACTAATCCGGTGATCATTATTATTATGGCAAGGGTGACTGGGGGGGGGAGGGACTTGTCGCCTTAACTGTCACTTCTTGCTAGTTAATATCACCTGCTACATATGTTTCAAAGAAGACTCGACATGTTGTGATTGTAGTAATCGATAAAAGTGGTATAAAAAGTCTCACATGGCCTTGATAGAGAATGAGTTGATTGTTATAATACATATTCCAATGGTTCATTGATAGTAATTTTAATATTGGGGGCTACAATTTAATTTGGGGGGGTAGGGAGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGAGGGGGGGGCAGAGAGGGGTGGGGTATATTGCGCCTGATAATATATTGTATAACATTGTGGGGGTATCCTTTCACAATGTTATAAAATTTATT
Unaligned ( gi|9 ): GATGTCAAATTGGACGAATGTAAAGTGACAGAATACATCTCCGATCTCGTAGTATCGTTATTACAGAGGGTTAGCAGATGTACAAAAAAAATTTGCAGACACACTATAGAAAAAAAAAAGAGTTAAAAGAATATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATCAGTTTTAAGATATTTTTTGCTATATAACTCCCTTCTGTCAGAAAAAGGCGAAGGTACAACTAATCCGGTGATCTAATTTTTATTATACCTATATATGGAAGAAGAATGCCCTTTGCTAGAGGGGGAACATTAGGCCTGCCACTTCTTGTCATTATAGTATTATTGTTATAATTCATAAAAAAAAGTATCCATGTACTTGATGAGAAATGAATATGATTATATAGATTTATCCTGTGTTGATTTTTGGAAGCTACAAGTTCAATTTTGTTGTTGAGGGGGAGGGGGTGTTAACATGCTCTGTAGAATCATATGTCTGGTGGTTACTTTTCACAATGTCCTATAAATGAGGAAACATGAAAACTAGTGTAGTGTCCCATCCCAACTGATCAAAATGCCCTAGGATGCCATGCTAAAGTCCCCATTTTAAAGAGTTTGCGCACATGGATAACAACAAAGTGAACTACATATAGCATTTCTGTGATGCATTTAAGTGAGTCTTGCGTTTTGTATTATAAATTGTATGCTGGATTCAACCGACTTGAAATATTGGTAGTATAAACAAAGAAGTTGGAAGCACTGGTTAGCTGATCCTGACAAAGTATTTTAGTATA
Unaligned ( gi|10 ): AAGTGTGTGTGTGGGGGTGGGGTGGGGGGTTGATACTACTCGCCCGTATATAAACTGCTTTATGTTTCGAGAGAATTCGTATACTTTTTAATGTTTAATCATGTAAGAACGTCTCATGGCCTTAATAAGAATGAATTGATTGTAAAAATCATTCTGTGATAAATACAATTGTTGAGGAGTACAAATATTCTTACAGACATCTATTCTGTAGGTACTTTTCACATATTTACAAAATTTTGTTTGAGTGGATGATGAAAACTGTAGGAGTGTCCAGTCCACTGAAATGCCAATTGAGGATCCATGCCACAGTCATTTGAAGAACTTGCATTTACTATGAAATATTGTAATGGACACAACAGAAGAGGCACTATGTCCAAATGGACATAAACGGCCAGTCCATGCCGTACAGTAATTACAAGGGTCGCCATTTAGAAAAGACTTTAATATGCGTTGTGCTAATGCAGCTCTTGTGTTTGGTTCCAAAGTGTATGCTGGATTCAACACGGACTTGGCAATTGTGGCAATAGAGAAGTTCAAGCTGGTGCTATGGTCCTGACATTAAAAGGATTTTACTAAGTATATTCAAGATAAACTTACAAATGGCATGCCGCTTTTGTCCAACACTTTCTTGCAAATAAAAGAGCATGCACAACTTTGCTACAAACTTTTCAGAAACAGAATACATGTACTCTGTTGGATAAGCAAACAATACAAAAATTTTATTTGAAATTCATATTCCATCAC
Unaligned ( gi|20 ): ATAATTTTATTTTATTTTTTTTTAGCCAAATTCCATTGGACACAGTACAGATATCAATCTATTAAAGAATCCGAGCTTTGTGTGGCCTATATAAATCTGCTTGCTCTCATTTTGAAAGAGATTGCAGACAAGCATGACATTGAAGATCTTACAAACTCAGTAGATTTTAAATTGCACATAGTCATACATTGTGCATGTATATCTCAAATCTGCACAAATTGGTCACTTCAAAATTCTATATATTATAAAAAAAATATTTCTTAAGTTAAAATAGTAAATACCAT
Unaligned ( gi|21 ): ATAGGGTCTGTAAGTCTCGTTTAGTTTCACGTTTCGCTTTCACTACTTCGCGGGTACATCAACGTATGGAAATTGTACTATTCACAACGTTGAATCGGTCCAATACATTAATTTTTGCTTGTTTGCAATTCGGAATGTAGCACACAAAGACCGGGAAAACCTTGCCTCATAGGTTTGATATTGGATTCCCTATCGATGCTAAGTAGGCCTAAACCTAAGGAAGCGGTAATACAAAGTAAAGTAGGTATCGATCATTAATCGATAACTAATGAATGTAAG
Unaligned ( gi|25 ): ATATGGTCTGTAAGTCTCGTTTAGTTTCACTTTCACTTTTACTACCTCCGGGTACATCAACGTATGGAACATATACTATCACAATGTTGAATTGGTCCCAATACATAATTTTGTGCGTTGTTTTGCAATCGGATGTACACAAAAGACAATGGGAAAACCCTGCCTCATAGTTGATTCGGATTCCCTATCGATGCTAACTATAAGGAAGATGTGAATACAAAGT
Unaligned ( gi|26 ): AGTACAATCATAATCGATGAATGATGTCGAATTGGACGAATGTAAAGTGACAGAATATATCTCCGAACTCGTAGTATCGTTATTTCAGAGTGTTAGCAGATGTACAAACATTTTTGCAGACAAACTATAGAAAGATTTTTTTTAAAAAGAATATTGACTAAGAATTTCCTAAATAAGGGGTGGGGGCGGGTCGGTTTTG
Unaligned ( gi|31 ): GTACATATCTTGAATCTATACATATTATTTCTGGAGAGAAAAAAAGGTAAATATAGTAAATACCATACATGTTTACATATATATTTTTTTATTATTTACAAATTTAAATCAATCTTATTCTGAT
Unaligned ( gi|32 ): TGTAAAGGTTCATTGAAAACTATGAAAAATTGTCAAAGATATTTATTAATAGACCACAAGTCATTGATTACACAACTTTGAACATGATGCGAGATGCACCAGTAATATCACAATAAAGTACA
Unaligned ( gi|36 ): GTATATTTAACAACCTTCCAAATGGCTTAACACTTAATAGCCCACCCTATCCTTTCTTACAATCAAATCCCACTTCACAAATGAGGAAGCACAACTTTGTTATAGAAAT
Unaligned ( gi|37 ): TTTGCAATCGGATGTACACACAAGACTTGGGAAACCCTACCTGATAATTAATTTGGATTGCCTATCGGTGCTAGGTATTCCTAAAGGAAGCGGTGAATACAAAGTTAA
Unaligned ( gi|38 ): TATTTATTTATCTTTATTTTTTTTTTTACAAATTAATCAATCTTATTCTGATTGTTTTTAATCTGCATTACCTAACAAAAATATCTAAAACCATTTTCTAGCAA
Unaligned ( gi|39 ): ATAGGGTATATAAGTCTCGACTTAGTTTCACCTTCACTTTTACTATTTCCGGGTACATCAACGGTATCAAAAATATGTATACTATTCCAAAACGTTGTAATC
Unaligned ( gi|40 ): ATTTTTATTATTTCTCTATATGGAAGAAAAATGCCCTTGCTAGAGAGAGAGAGAGAGGGGGGGGAGCTTGCACCTAGACTGCCACTTCTTGCTAGTATAAAC
Unaligned ( gi|41 ): TTGCAAACTGGTGCTAATCCTAACAGACAAGCAATTTAGTATATTTGACAAACTTTCAAATTGCATGACACTTAACATGTCACTCTTTCTTACAAATTC
Unaligned ( gi|42 ): AATATCGACAACGAATTCCCTAAATGGGGGAGGGGTTAAGTTTTAAGATACCATTTTTTTTCTGTATTTGTCAGAAAAAGGCGGAGGTACAACTAATC
Unaligned ( gi|44 ): GGGGGGGGGGGGGGGGGGGGGGCTGTTTTTGCCTTTAAAAACAAACTTTAATTTTCAT
Unaligned ( gi|45 ): GTAATGATTGCAAATTGTCTCTTAATCACATGACGAGACTTACAGACCCTATA
Unaligned ( gi|46 ): AAACAATCTCGCTATATCTCATCAATCATGTGACTAGGCTTACAGGCCCAAT
Unaligned ( gi|47 ): ATAGGGTCTGTAAGTCTCGTGTAGTTTCACTTTCGCTTTTACTACTTCCGG
Unaligned ( gi|49 ): AATAGGGTCTGTAAGTCTCGTTTAGTTT