lowQualScore : 1111111111111111111111111111111 11111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2 111111111 11111111 7777777 2222222222222 222222222222 4444444444444444444444444444444 333 11 777777777777777 111111 11111111 222222 555555555555 1 11111 333333333 111 3333333 111111 333333333333 1 33333333333333333333 11 1111 44444444 11 1 11 111 44444444444 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 3333333333 1111 1 11 555555555555 222222 11111111 11111 1111111 22222222222 5555555555555555555555555555555555555555555555555555555555555 11 111 222222222222 2222222222222 2222 11111 1 1 11111111 111111111 333
lowQualScore : 2 2 66666 99999999 2 7 3 44 88888 6666 1 333333333 3 44 3 44 3 6 4 55 4 4 44444444 4 4 4 4 1 4 2 4 4 2222222 55 4 2222222222222 777 000000000000 4 4 9 4 4 777 4 5 1111111111111111111111111111111 000 22 777777777777777 7 777777 5 5 0 33333333 0 0 555555 333333333333 4 8 8 4 4 77 4 4 4 4 5 0 5 8 1 11111 6 6 555555555 111 6 5555555 6 6 999999 6 2 444444444444 6 5 99 11111111111111111111 77 6 00 9999 8 8 99999999 33 5 22 7 6 5 2 4 7777 4 888 4 9999 777 88888888888 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 0 00 6 5 3333333333 5 4 4 4 3333 3 4 00 4 8 8 4 333333333333 555555 0 3 33333333 22222 66 5 6666666 33333333333 5555555555555555555555555555555555555555555555555555555555555 44 5 5 5 66 5 66 5 4 222 4 4 4 4 000000000000 777 2222222222222 3 8888 00000 777 4 2 4 0 5 2 4 1 4 4 4 4 44444444 4 4 55 4 6 3 44 3 44 333333333 6666 88888 000 44 44 3 2 99999999 66666 2 2
lowQualScore : . . ..... ........ . . . .. ..... .... . ......... . .. . .. . . . .. . . ........ . . . . . . . . . ....... .. . ............. ... ............ . . . . . ... . . ............................... ... .. ............... . ...... . . . ........ . . ...... ............ . . . . . .. . . . . . . . . . ..... . . ......... ... . ....... . . ...... . . ............ . . .. .................... .. . .. .... . . ........ .. . .. . . . . . .... . ... . .... ... ........... ........................................................................................ . .. . . .......... . . . . .... . . .. . . . . ............ ...... . . ........ ..... .. . ....... ........... ............................................................. .. . . . .. . .. . . ... . . . . ............ ... ............. . .... ..... ... . . . . . . . . . . . . ........ . . .. . . . .. . .. ......... .... ..... ... .. .. . . ........ ..... . .
lowQualScore : 7 7 77777 77777777 9 8 1 22 88888 5555 3 333333333 2 66 3 66 3 7 0 55 0 0 55555555 4 4 4 4 1 0 5 0 0 5555555 55 0 0000000000000 000 555555555555 4 4 8 4 4 222 4 0 6666666666666666666666666666666 555 77 000000000000000 3 000000 7 0 4 88888888 2 1 666666 333333333333 4 9 9 4 4 11 4 4 4 4 0 1 7 0 0 88888 7 7 777777777 777 7 3333333 7 7 333333 7 5 222222222222 7 4 22 22222222222222222222 77 7 22 8888 0 0 55555555 88 0 22 3 7 7 8 4 0000 4 333 4 4444 888 55555555555 0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 2 88 7 7 0000000000 0 4 4 4 0000 3 4 66 4 9 9 4 333333333333 666666 1 4 88888888 55555 99 0 2222222 88888888888 3333333333333333333333333333333333333333333333333333333333333 00 7 7 7 99 0 99 0 4 888 4 4 4 4 555555555555 000 0000000000000 4 0000 00000 000 0 6 0 8 0 5 5 1 4 4 4 4 55555555 0 0 55 0 7 3 66 3 66 333333333 5555 88888 000 22 66 3 7 77777777 77777 7 7
consensus : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACAA-CT-TT--GCAAAA----T----CAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAA-TGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CAA-ACCA-ACGGGTCTAAATGTTTAACAAA-CAAGAAATCTTAGACAAACATACATAAATT-CACAACCAACAT-ACAT----ATAAATG--TTTAA-CGAACGTAAAAC-------------GTAA---TCAACATA------------CATCTTTGACACCAC-AAGC-GGACGCCC-AAGTCAACCAAT-A--GG-GGGCGCATTT-TATGAAG-A-A-AAG--GAA---T--------------TATCGAA--ATTGAGACAT-GCGCATCAACAG-AAT---AATAAGT-AAAGATGGGG-ACGG-CAAAA-TATGCAGGCTT-CAGTTCTAAACTT---ATA--TTAGTTATCATAGCCAAATAGA------ATTA------------T-GTACAG-AAAAAA-T-GAA-GCG-AAAG-CAAAA-TTGTATCCGGAA-AGAA-AACACA-AGC-TCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA-CC----ATTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTG-TCATA--AAATTCAACTATAGAATT-ATAG--------TCAGCCTCC-GGTA-TTAGTTT-CTGCTT-T--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGA-TCTAG--A-G-GGGG---TTACGGGGGTT-GCAAC----CC---CCC---------T-TGATTTTGTTNTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCNNNNNNNGGGGGGTTGA-GCT-TGT---------GTT-TTCT-TTCCGGATACAA-TTTTG--C-TT-C-GC--TTC-A-TTTTTT-CTGTAC-A------------TAAT------TCTATTTGGCTATGATAACTAA--TAT---AAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------A----------------------TC----T--------------G---ATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTT-AC--TTCATA-AAATGCGCCC-CC--T-ATTGGTTGACTT-GGGCGTCC-GCTT-GTGGTGTCAAAGATG------------TATGTTGA---TTAC-------------GTTTTACGTTCGTTAAA-A--CATT-----TATGT---ATGT-TGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTGTTTGTTAAACATTTAGACCCGT-TGGT-TTG-AATA-TCAAA--------TGTT-CGATT-AAA--TT-GCAAAGATCGTTGATTGTACA-TTT-TTCGC--TTGTT-AAATTA--CAATTTA---------CATTG----A----TTTTGCA--A--AG--T-TGT-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATA
Reference ( gi|1 ) : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACAAACT-TT--GCAAAA----T----CAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAA-TGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CAA-ACCA-ACGGGTCTAAATGTTTAACAAA-CAAGAAATCTTAGACAAACATACATAAATT-CACAACCAACAT-ACATGTACATAAATG--TTTAA-CGAACGTAAAAC-------------GTAA---TCAACATA------------CATCTTTGACACCAC-AAGC-GGACGTCC-AAGTCAACCAAT-A--GG-GGGCGCATTT-TATGAAG----------------T--------------TATCGAAATATTGAGACAT-ACGCATCAACAG-AATATAAATAAGTAAAAGATGGGG-ACAG-CAAAA-TATGCAGGCTT-CAGTTCTAAACTT---ATA--TTAGTTATCATAGCCAAATAGA------ATTA------------T-GTACAG-AAAAAA-T-GAA-GCA-AAAG-CAAAA-TTGTATCCGGAA-AGAA-AACACA-AGC-TCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTCTTTTT-T---TTTTCAAA-GGGCGG-GGATT-C----AACCCCC--GCAA-CTGTCCCATTGAA-CC---CATTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTG-TAATA--AAATTCAACTA--------A-AG--------TCAGCCTCC-GGTA-TTAGTTT-TTGCTT-T--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCAGA-TCTAG--A-G-GGGG---TTACGGGGGTT-GCAAC----CC---CCC---------T-TGATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGGGGTTGA-GCT-TGT---------GTT-TTCT-TTCCGGATACAA-TTTTG--C-TT-C-GC--TTC-A-TTTTTT-CTGTAC-A------------TAAT------TCTATTTGGCTATGATAACTAA--TAT---AAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------A----------------------TC----T--------------G---ATGCGT-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTT-AC--TTCATA-AAATGCGCCC-CC--T-ATTGGTTGACTT-GGGCGTCC-GCTT-GTGGTGTCAAAGATG------------TATGTTGA---TTAC-------------GTTTTACGTTCGTTAAA-A--CATT-----TATGT---ATGT-TTGTTGTG-AATTTATGTATGTTTGTATAAGATTTCTTATTTGTTAAACATTTAGACCCGT-TGGT-TTG-AATA-TCAAA--------TGTT-CGATT-AAA--TT-GCAAAGATCGTTGATTGTACA-TTT-TTCGC--TTGTT-AAATTA--CAATTTA---------CATTG----A----TTTTGC---A--AG--T-TGT-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATA
gi|4 : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACAA-CT-TT--GCAAA-----T----CAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAAATGTACAATCAACGATCTTTGC-AA--TT--AATCG-AACA--------TTTGA-TATT-CAA-ACCA-AC-GGTCTAAATGTTTAAC-AA-CAAGAAATCTTAGACAAACATACATAAATT-CAC-ACCAACAT-ACAT-------AATG---TTAA-CGAACGTAAAAC-------------GTAA---TCAACATA------------CATCTTTGACACCACAAAGC-GGACGCCC-AAGTCAACCAAT-A---G-GGGCGCA-TT-TATGAAGTAAAGAAGCGGAAC--T--------------TATCGAA--ATTGAGACAT-GCGCATCAACAG-------AATAAGT-AAAGATGGGG-TCGGCCAAAA-TATGCAGGCTT-CGGTTCTAAACTT---ATA--TTAGTTATCATAGCCAAATAGA------ATTA------------T-GTACAGAAAAAAA-T-GAA-GCG-AAAGCCAAAA-ATGTATCCGGAA-AGAA-AA-ACC-AGC-TCA
gi|12 : tttttttttttcaaaagggcgggggtttcaaccccgcaactgtcccattgaaccatttcaaagattctttatatctggatagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcttcggtaattagtttctgcttgttacttgtagaagaatccatcatgtgtagtaatttaagctttatcctgtatgaatcattggcagatctagaggggggttacgggggtttgcaacccccccccccccctttgattttgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngGTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACAA-CT-TT--GCAAAA----T----CAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAA-TGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CAA-ACCA-ACGGGTCTAAATGTTTAACAAA-CAAGAAATCTTAGACAAACAAACATAAATT-CACAATCAACAT-ACATA-AAATTAATG--TTTAA-CGAACGTAAAAC-------------GTAA---TCAACATA------------CATC
gi|15 : GTATGGGCG-GCGGAAACGGG-----CAA--------AAATT-ACAA-CT-TTTTGCAAA-----T----CAATG---------TAAATTGGTTAATTTTAACAAAAGCGAATAAA-TGTACAATCAACGATCTTTGCAAA--TTTAAATCGAAACA--------Tc
gi|21 : GTATGGGCG-GCGGAAA-GGG-----CAA--------AA-TG-ACAA-CT-TT--GCAAAA----T----CA-TG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAA-TGa
gi|16 : GTATGGGCGTGCGGAAC-AGGTGTGTCAATGTAGGATAGATGGACAA-CT-TT--GCAAAACTGCT----CATTGACATTGCTCCAAATTG--TAAGTT-AATAA--GCGAA-AAA-TGtt
gi|2 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACAAACT-TT--GCAAAA----T----CAATA---------TAAATTA--TAATCT-AACCA--ACGAA-AAA-AAGACAATCAACGATCTT--C-AA--TTT-AATCG-AACA--------TTTGA-TATT-CAA-ACCT-AC-GGTCTAAAAGTTTAACAAA-C-AGAAAT-TTAGACAAACATACATAAA---CACAACCAACAT-ACA-------AAATG--TTTAA-CGAACGTAAAAC-------------GTAA---TCAA-ACA------------TATCTTTGACACCAC-AA-C-GGACGCCCAAAGTCAA-CAATCA--GGAGGGCG-ATTTCTATGAAGTAAAAGAAGCGAAC--T--------------TATCGAA--ATTGAGACAT-GCGCATCAACAG-AAT-----CAAGT--AAGATGGCG--CA---AAAA-TATGCAGGCTT-C-GTTCTAA--CT---ATA--TTA-TTATCATACTAAAAGAGA------ATTA------------T-GTACAG-AAAAAA-TGGAA-GCG-AAAG-CAAAATTTGTATCCGGAA-AGAA-AACACA-A
gi|3 : cTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACAA-CT-TT--GCAAAA----T----CAATG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAA-TGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGAATATT-CAA-ACCA-ACGGGTCTAAATGTTTAACAAA-CAAGAAATCTTAGACAA-CATACATAAATT-CACAACCAACAT-ACAT------AAATG--TTTAA--GAACGTAAAAC-------------GTAA---TCAAC-TA------------CATCTTTGACACCAC-AAGC-GGACGCCC-AAGTCAACCAAT-A--GG-GG-CGCATTT-TATGAAG----------------TAAAGAAGCGGAACTTATCGAAAT--TGAGACAT-GCGCATCAACAG-AATA------AGTAAA-GATGGGGGACGG-CAAAAATATGCAGGCTT-CAGTTCTAAACTTTTAATA--TTAGTTATCATAGCCAAATAGA------ATTA------------T-GTACAG-AAAAA--T-GAA-GCG-AAAT-CAAAA-TTGTATCCGGAA-AGAA-AACACA-AGC-TCAAtgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcttttgcaaagggcggggtcaacccccctgcaaactgtccattgaaacccatttcaacattctttatgatctgataactcttgctatagatgtcatagaaaattcaactataggaattatagtcagccccggtattagttctcttctgttacttgtagaaaatccatctcatgtgattataattaagctttaatcctgtatgaatcattgcagaatctagaggggttcacggggttgcaacccccctgtgattttgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgggggttgagctatgtatttgctttccggatacaattttgctttcgccttcatttttttctgtaccataattcttttggctatgataacaaacatataagttagaactgaagcctgcatgatttgcctccccatctttattatttgttgatgcgcgatgtctcaatttgataagttcccgctctgtacttttcataaaaatcgccccctatgggttaccttggcgtccgcttgtggtgtcaaagatgtatgttgattacgtttacgttcgtttaaacgcatttatgtatgttggttgtgaaatttatgtatgtttgtctaagattcgttgtttgtaaacatttaacccgtggtgttgaatatcaaatgttcgattaaattgcaaagatcgtgatttacatttttcgctttttaaattacaatttacattattttcaa
gi|6 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACAA-CT-TT--GCAAAA----T----CAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAA-TGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACAAAAAGTCATTTGA-TATT-CAA-ACCA-ACGGGTCTAAATGTTTAACAAT-CAAGAAATCTTAGACAAACATACATAAATT-CAAAACCAACAT-ACAT------AAATG--TTTAA-CGAACGTAAAAC-------------GTAA---TCAACATA------------CATCTTTGACACCAC-AAGC-GGACGCCC-AAGTCAACCAAT-A--GG-GGGCGCATTT-TATGAAGTAAAGAAGCGGAAT--T--------------TATCGAA--ATTGAGACAT-GCGCATCAACAG-------AATAAGT-AAAGAT-GGG-ACGG-CAAAA-TATGCAGGCTT-CAGTTCAAGTTTT---ACG--TTCGTTga
gi|7 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACAA-CT-TT--GCAAAA----T----CAATG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAAATGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CAA-ACCA-ACGGGTCTAAATGTTTAACAAA-CAAGAAATCTTAGACAAACATACATAAATT-CACAACCAACAT-------ACATAAATG--TTTAA-CGAACGTAAAAC-------------GT-A---TCAACTTA------------CATCTTTGACACCAC-AAGC-GGA-GCCC-AAGTCAACCAAT-A--GG-GGGCGCATTT-TATGAAG----------------T--------------
gi|8 : ataagttccgcttctttTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACAA-CT-TT--GCAAA-----T----CA-TG---------TAAATTG--TAATTT-A-CAA--GCGAA-AAA-TGTAAAATCAACGATCTTTGC-AACGTTT-A-TCG-AACA--------TTGGA-TATTTCAA-ACCAGACGGGTCCTAATGTTTACCAAATCAA--AATCT-AGACAAACATACATA--TT-CACAAC-AACAT-ACA----CATGAAGT--TTTAA-CGAACGTAAAAC-------------GTAA---TCAACATA------------CA---------------AGCCGGACGCCC-A-GTCAACCAAT-ACCGG-GGGAGCATTT-TATGAAG----------------T--------------AAACGGAAat
gi|13 : acagatgaagttcccgcTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-Aa
gi|29 : tttaatatttcttgtttgttaaacatttagacctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-g
gi|28 : gggactctTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-
gi|27 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAAgatgaccc
gi|25 : ATGGGCG-GCGGAAA-GGG-----CAA--------AAATG--CATACT-T-------AA----T----CAgataacacta
gi|9 : AACTGTT--GCAAAA----TAAATCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAA-TGTACAATCAACGATCTTT-C-AA--TTT-AATCG-AACA--------TTTGA-TATT-CAA-ACAA-ACGGGTCTAAATGTTTAACAAA-CAA-AAATCTTAGACAAACATACATAA-TT-CACAACCAACAT-ACAT------AAATG--TTTAA-CGAACGTAAAAC-------------GTAA---TCAACATA------------CATCTTTGACACCAT-AAGC-GGACGCCC-AAGTCAACCAAT-A---G-GGGCGCATTtaatatat
gi|2 : -TT--G-AAAA----T-----AATG---------TAAATTG--TAATTT-AAAAA--GCGAA-AAA-TGTA-AATCA-CGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CAACACCA--CGGGT-TAAATGTTTA-CAAA-CAACGAATCTTAGACAAACATACATAAATTTCACAACCAACAT-ACAT------AAATGCGTTTAAACGAACGTAAA-C-------------GTAA---TCAACATA------------CATCTTTGACACCAC-AAGC-GGACG-CC-AAGGTAACCCAT-A--GG-GGGCGATTTT-TATGAAAAGTACAGAGCGGGAACT--------------TATCAA---ATTGAGACATCGCGCATCAACA--AAT---AAT-----AAAGATGGGG-A-GG-CAAAT-CATGCAGGCTT-CAGTTCT-AACTT---ATATGTTTGTTATCATAGCCAAA-AGA------ATTA------------TGGTACAGAAAAAAA-T-GAAGGCG-AAAG-CAAAA-TTGTATCCGGAA-AGCA-AATACATAGC-TCAAgt
gi|13 : ctatgggcggcggaaagggcaaaaatgacaaactttgcaaaatcaatataaattataatctaaccaacgaaaaaaagacaatcaacgatcttcaatttaatcgaacatttgatattcaaacctacggtctaaaagtttaacaaacagaaatttagacaaacatacataaacacaaccaacatacaaaatgtttaacgaacgtaaaacgtaatcaaacatatctttgacaccacaacggacgcccaaagtcaacaatcaggagggcgatttctatgaagtaaaagaagcgaacttatcgaaattgagacatgcgcatcaacagaatcaagtaagatggcgcaaaaatatgcaggcttcgttctaactatattattatcatactaaaagagaattatgtacagaaaaaatggaagcgaaagcaaaatttgtatccggaaagaaaacacaatgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcttttgcaaagggcggggtcaacccccctgcaaactgtccattgaaacccatttcaacattctttatgatctgataactcttgctatagatgtcatagaaaattcaactataggaattatagtcagccccggtattagttctcttctgttacttgtagaaaatccatctcatgtgattataattaagctttaatcctgtatgaatcattgcagaatctagaggggttcacggggttgcaacccccctgtgattttgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgggggGGTCTAAATGTTTAACAAA-CAAGAAATATTAAA
gi|14 : ACAAACATACATAAATT-CACAACCAACATGATACGTAAATGATTA--TTTAA-CGAACGTAAAACGTAATCACATAACGTAAACGTAAACGTAAAACGTAAAACACATCGTTGACACCAC-AAGC-GGACGCCC-AAtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcatttttgccctttccgccgcccatag
gi|30 : AT-A--GG-GGGCGCATTT-TATGAAG----------------T--------------
gi|3 : cttctttT-GCGCATCAACCGCGA---GAATAAGTAAA-GATGGGG-ACGG-CAAAA-TATGCAGGCTT-CAGTTCTAAACTT---ATT--TTAGTTATCATAGCCAAATAGA------ATTA------------T-GTACAG-AAAAAA-T-GAA-GCG-AAAG-CAAAA-TTGTATCCGGAA-AG-A-AACACA-AGC-TCAA
gi|5 : AAA-TATGCAGGCTT-CAGTTCTAAAC----------TTAGTTATCATAGCCATATAGACACAATGTTAACTTCGCCTATTT-GTACAA-AAAAAATT-GAA-ACA-AAAG-TACAC-TTGTATCCGGAA-AGAGCAAAACA-AGaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|5 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagTGCAGGCTTTCAGTTCTAAACTT---A-------GTTATCATAGCCATATAGACACAATGTTACTTGCTATT---T-GTACAA-AAAAAT-T-GAA-ACACAAAG-T-AAA-TTGT-TCCGGAAGAGCA-AA-ACA-AGCTTCAAtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|19 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagaaatatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgagagggAAATAGA------ATTACATGTA------T-GTACTG-AAAAAA-T-GAA-ACG-AAAG-CAAAA-TTGTATCTGGAG-AGCA-AA
gi|10 : t------ATTA------------T-GTACAG-AAAAAAAT-GAA-ACG-AAAG-GAAAA-TTGTATCCGGAA-AGAtaaatccagataaaaaagtt
gi|5 : tacaaaagatgcattgcaacacattgaacacatggaaacctggaggatctagagaggggttacgggagttgcaaccccccaaaccccatttgattttgtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcTCTCTCTCT-TAATTTTTCAAA-G--CGG-G--TG-C----AACCCCC--GCAA-CTCCACCACTGAA---------TTCAA-GATT-CTTTTTTAT-ATA-TGGATACATCGCTGTTTAAGCTATAGCTGTAGATTG-TCATA--AAATTCGACTA--------G-AGAATTATAGTCAGCCTCT-GGTA-TTAGTTT-CTGCTT-T--TTT-ACTTGTAGAA-A
gi|17 : tctctcTCTCTTTTGAT---TTTTCAAA-AGGAGG-GGGT----------------GCAA-C----CCATTGAA-TC---AATTTCAC-GATT-CTTT---AA-ATC-TGGAAA------------AGTTCTTACTGTAGATTG-Ttatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|11 : ctctcTTCTTTTT-C---TTTT-AAA-GGGCGGTGGGTT-TTCTAGACCCAC--GCAA-CTGTCCCATTGAA-TCCGGCATTTCAA-GATTCCTTT---ATCATCGTGGATA------------AGCTCTTGCTG-AGATTGTTTAT---AAATTCAACTATAGAT---A-AG--------CCAGCTTCCTGGTA-TTAGTTTCCTGCTT-TGGGTTAACTTGTAGAA-ATTCCATGGTCAATGGTG--TAGTAATTTCAG
gi|2 : ctttctttcttcgtctccCTTTTC-T---TTTGCAAA-GGGCGG-GG--T-C----AACCCCCCTGCAAACTGTCC-ATTGAAACC---CATTTCAA-CATT-CTTT---ATGATC-TG-ATA------------A-CTCTTGCTATAGAT-G-TCATAGAAAATTCAACTATAGGAATTATAG--------TCAGCC-CC-GGTA-TTAGTTC-T--CTTCT--GTT-ACTTGTAGAA-AATCCATC-TC-AT-GTGATTA-TAATT-AAGCTTTAATCCTGTATGAAT-CATTG-CAGAATCTAG--A-G-GGGT---TCACGGGG-TT-GCAAC----CC---CCC---------TGTGATTTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC--------GGGGGTTGA-GCTATGT---------ATT-TGCT-TTCCGGATACAA-TTTTG--C-TTTC-GCC-TTC-A-TTTTTTTCTGTACCA------------TAAT------TCT-TTTGGCTATGATAACAAACATAT---AAGTT-A-----GAA--CTG-AA-------GCC-----------TGCATGATTTGCCTCCCCA----------------------TC----TTTATTATTTGTT--G---ATGCGCGATGTCTCAATTT-GAT-AAGTTCCC-GC-TC--TGT-ACTTTTCATA-AAAATCGCCC-CC--T-ATGGGTT-ACCT-TGGCGTCC-GCTT-GTGGTGTCAAAGATG------------TATGTTGA---TTAC-------------G-TTTACGTTCGTTTAA-ACGCATT-----TATGT---ATGT-TGGTTGTGAAATTTATGTATGTTTGTCTAAGATTCGTTGTTTG-TAAACATTTA-ACCCG--TGGTGTTG-AATA-TCAAA--------TGTT-CGATT-AAA--TT-GCAAAGATCG-TGATT-TACA-TTT-TTCGC--TTTTT-AAATTA--CAATTTA---------CATT-----A----TTTT-C---A--Aaaaaaaaaagc
gi|4 : ctatgggcggcggaaagggcaaaaatgacaaactttgcaaaatcaatataaattataatctaaccaacgaaaaaaagacaatcaacgatcttcaatttaatcgaacatttgatattcaaacctacggtctaaaagtttaacaaacagaaatttagacaaacatacataaacacaaccaacatacaaaatgtttaacgaacgtaaaacgtaatcaaacatatctttgacaccacaacggacgcccaaagtcaacaatcaggagggcgatttctatgaagtaaaagaagcgaacttatcgaaattgagacatgcgcatcaacagaatcaagtaagatggcgcaaaaatatgcaggcttcgttctaactatattattatcatactaaaagagaattatgtacagaaaaaatggaagcgaaagcaaaatttgtatccggaaagaaaacacaatgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTTT-T---TTTTCAAAAGGGCGG-GGGTTTC----AACCCC---GCAA-CTGTCCCATTGAA-CC----ATTTCAAAGATT-CTTT---AT-ATC-TGGATA-------------GCTCTTGCTGTAGATTG-TCATA--AAATTCAACTATAGAATT-ATAG--------TCAGCTTC--GGTAATTAGTTT-CTGCTT----GTT-ACTTGTAGAAGAATCCAT---C-AT-GTG--TAGTAATTTAAGCTTTA-TCCTGTATGAAT-CATTGGCAGA-TCTAG--A-G-GGGGG--TTACGGGGGTTTGCAAC----CCCCCCCC---------C-CCCCTTTGATTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG------TGA-GCT-GGT----------TT-TTCT-TTCCGGATACAT-TTTTGGCT-TT-C-GC--TTC-A-TTTTTTTCTGTAC-A------------TAAT------TCTATTTGGCTATGATAACTAA--TAT---AAGTTTAGAACCGAAGCCTG-CATATTTTGGCCGACCCCATCTTTACTT-------------A----------------------TTCTGTT--------------G---ATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTT-AC--TTCATA-AA-TGCGCCC-C---T-ATTGGTTGACTT-GGGCGTCC-GCTTTGTGGTGTCAAAGATG------------TATGTTGA---TTAC-------------GTTTTACGTTCGTTAA-----CATT------ATGT---ATGT-TGGT-GTG-AATTTATGTATGTTTGTCTAAGATTTCTTGTT-GTTAAACATTTAGACC-GT-TGGT-TTG-AATA-TCAAA--------TGTT-CGATT--AA--TT-GCAAAGATCGTTGATTGTACATTTT-TTCGC--TTGTT-AAATTA--CAATTTA---------CATTG----A-----TTTGCA--A--AG--T-TGT-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATA
gi|3 : tTTTTT-T---TTTTCAAA-GGGCGG-GGGTTTC----AACCCCC--GCAA-CTGTCCCAT-----------ATCT--G-GATT-T----------------ATA------------AGCTCTTGCTGTAGATTG-TCATA--AAATTCAACTATAGAATT-ATAG--------TCAGCCTCC-GGTA-TTAGTTT-CTGCTT-T--GTT-ACTTGTAGAA-AATCCAT---------TG--TA------------TGAATC------------ATTGGCAGA-TCTAG--A-G-GGGG---TTACTGGGGTT-GCAAC----CC---CCCACCCCCT--T-TGATTTTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNN-NGTTGAGCTTGTGTT-TTCT-TTCCGGATACAA-TTTTGA-T-TT-C-GC--TTC-A--TTTTT-CTGTAC-A------------TAAT------TCTATTTGGCTATGATAACTAA--TATTAAAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------A----------------------TT----T--------------c
gi|18 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctATA--AAATTCAACTATAGAATT-ATAG--------TCAACCTCC-GGTA-TTAGTTT-CTGCTttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|3 : ttttaaaatctttnnnnnnnnnnnnnnnnnnnnnnnnntTATAAAT-C-----CAGA-TATGG----G-ACAG---TTGCGGGGGTT-GAAAC----CC---CC
gi|20 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcTGAGTGCATTGGCGGA-TTTAG--A-G-GGGG---TT--GGGGGTT-GCAACACCTCC---CCC---------T-Tagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|23 : gaaaaatagtT-CATTGGC-GA-TTTAGGGA-G-GGGGAGGCTGTGGGAGTT-GCAAC----CC---CCttcttttttactta
gi|24 : -CAATGGCGGA-TCTAG--A-G-AGGAGA-TTACGGGATTC-GCAAC----CC---CCT---------T-Ttccccttttttttttaa
gi|10 : tgTGGAGGA-TCTAG--A-GAGGGG---TTACGGGAGTT-GCAAC----CC---CCCAAACCCCATT-TGATTTTG
gi|26 : tacaaaagatgcattgcaacacattgaacacatggaaaccGA-TCTAG--ATG-GGAG---TTATGGGGGTT-GCAAC----CC---CCtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgctctttccggatacaattttcctttcgtttcatttttttctgtacataat
gi|2 : agtgGGGGGGGTGA-CAT-TGT---------GTT-TTCT-TTCCGGATACAAATTTTG--C-TTTC-GC--TTCCA-TTTTTT-CTGTAC-A------------TAAT------TCTCTTTTAGTATGATAA-TAA--TAT---AG--TTA-----GAA--C-G-AA-------GCC-----------TGCAT-------------ATTTTTGCGCCATCTTACTTGATTC----T--------------GTTGATGCGC-ATGTCTCAATTTCGAT-AAGTT-C--GCTTC--TTTTAC--TTCATAGAAAT-CGCCCTCC--TGATTG-TTGACTTTGGGCGTCC-G-TT-GTGGTGTCAAAGATA------------TGT-TTGA---TTAC-------------GTTTTACGTTCGTTAAA----CATT-----T-TGT---ATGT-TGGTTGTG---TTTATGTATGTTTGTCTAA-ATTTCT-GTTTGTTAAACTTTTAGACC-GT-AGGT-TTG-AATA-TCAAA--------TGTT-CGATT-AAA--TT-G--AAGATCGTTGATTGTCTT-TTT-TTCGT--TGGTT-AGATTA--TAATTTA---------TATTG----A----TTTTGC---A--AAGTT-TGT-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATAtcc
gi|3 : cGGGGGTTTGA-GCT-TGT---------GTT-T-CT-TTCCGGATACAA-TTTTG--C-TTTC-GC--TTC-A-TTTTTT-CTGTAC-A------------TAAT------TCTATTTGGCTATGATAACTAA--AAT---AAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------A----------------------TT----T--------------ccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcttttgcaaagggcggggtcaacccccctgcaaactgtccattgaaacccatttcaacattctttatgatctgataactcttgctatagatgtcatagaaaattcaactataggaattatagtcagccccggtattagttctcttctgttacttgtagaaaatccatctcatgtgattataattaagctttaatcctgtatgaatcattgcagaatctagaggggttcacggggttgcaacccccctgtgattttgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgggggttgagctatgtatttgctttccggatacaattttgctttcgccttcatttttttctgtaccataattcttttggctatgataacaaacatataagttagaactgaagcctgcatgatttgcctccccatctttattatttgttgatgcgcgatgtctcaatttgataagttcccgctctgtacttttcataaaaatcgccccctatgggttaccttggcgtccgcttgtggtgtcaaagatgtatgttgattacgtttacgttcgtttaaacgcatttatgtatgttggttgtgaaatttatgtatgtttgtctaagattcgttgtttgtaaacatttaacccgtggtgttgaatatcaaatgttcgattaaattgcaaagatcgtgatttacatttttcgctttttaaattacaatttacattattttcaa
gi|5 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaGAGGGTTGAAGCT-TGT----------TT-TGCTCTTCCGGA-ACAA-TTT-A--C-TT-T-GTGTTTC-A-ATTTTT-TTGTAC-AAATAGCAAG---TAACATTGTGTCTATATGGCTATGATAAC-------T---AAGTTTA-----GAA--CTGAAA-------GCC-----------TGCAcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|5 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagaaatatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgaCT-TGT---------TTTGCTCT-TTCCGGATACAA-GTGTA--C-TT-TTGT--TTC-AATTTTTT-TTGTAC-AAATAGGCGAAGTTAACATTGTGTCTATATGGCTATGATAACTAA----------GTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------A----------------------TT----T--------------
gi|19 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagTT-TGCT-CTCCAGATACAA-TTTTG--CTTT-C-GT--TTC-A-TTTTTT-CAGTAC-ATACATG------TAAT------TCTATTTtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|10 : tTCT-TTCCGGATACAA-TTTTC--CTTT-C-GT--TTC-ATTTTTTT-CTGTAC-A------------TAAT------taaatccagataaaaaagtt
gi|6 : tacaaaagatgcattgcaacacattgaacacatggaaacctggaggatctagagaggggttacgggagttgcaaccccccaaaccccatttgattttgtannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcAACGAA--CGT---AAAACTT-----GAA--CTG-AA-------GCC-----------TGCATATTTTGCCGTCCCA----------------------TC----TTTACTTATTCTGTTG---ATGCGC-ATGTCTCAATTTCGAT-AAATT-CC-GCTTC--TTT-AC--TTCATA-AAATGCGCCC-CC--T-ATTGGTTGACTT-GGGCGTCC-GCTT-GTGGTGTCAAAGATG------------TATGTTGA---TTAC-------------GTTTTACGTTCGTT-AA-A--CATT-----TATGT---ATGT-TGGTTTTG-AATTTATGTATGTTTGTCTAAGATTTCTTGATTGTTAAACATTTAGACCCGT-TGGT-TTG-AATA-TCAAATGACTTTTTGTT-CGATT-AAA--TT-GCAAAGATCGTTGATTGTACA-TTT-TTCGC--TTGTT-AAATTA--CAATTTA---------CATTG----A----TTTTGCA--A--AG--T-TGT-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATA
gi|3 : ----T--------------G---ATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTT-AC--TTCATA-AAATGCGCCC-C---T-ATTGGTTGACTT-GGGCGTCC-GCTT-GTGGTGTCAAAGATG------------TA-GTTGA---TTAC-------------GTTTTACGTTC-TTAAA----CATT-----TATGT---ATGT-TGGTTGTG-AATTTATGTATG-TTGTCTAAGATTTCTTGTTTGTTAAACATTTAGACCCGT-TGGT-TTG-AATATTCAAA--------TGTT-CGATT-AAA--TT-GCAAAGATCGTTGATTGTACA-TTT-TTCGC--TTGTT-AAATTA--CAA-TTA---------CATTG----A----TTTTGCA--A--AG--T-TGT-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATA
gi|8 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgtGATGAAGTT-CCCGCTTCCGTTT-AC--TTCATA-AAATGCTCCC-CCGGT-ATTGGTTGAC-T-GGGCGTCCGGCT---------------TG------------TATGTTGA---TTAC-------------GTTTTACGTTCGTTAAA-A--C-TT-----CATGT---GTATGTTGTTGTG-AA--TATGTATGTTTGTCT-AGATTT-TGATTTGGTAAACATTAGGACCCGTCTGGT-TTGAAATA-TCCAA--------TGTT-CGA-T-AAACGTT-GCAAAGATCGTTGATTTTACA-TTT-TTCGC--TTG-T-AAATTA--CAATTTA---------CA-TG----A-----TTTGCA--A--AG--T-TGT-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATAga
gi|7 : acaAT-AAGTT-CC-GCTTC--TTT-AC--TTCATA-AAATGCGCCC-CC--T-ATTGGTTGACTT-GGGC-TCC-GCTT-GTGGTGTCAAAGATG------------TAAGTTGA---T-AC-------------GTTTTACGTTCGTTAAA----CATT-----TATGT---ATGT-TGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTGTTTGTTAAACATTTAGACCCGT-TGGT-TTG-AATA-TCAAA--------TGTT-CGATT-AAA--TT-GCAAAGATCGTTGATTGTACATTTT-TTCGC--TTGTT-AAATTA--CAA-TTA---------CATTG----A----TTTTGCA--A--AG--T-TGT-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATAa
gi|30 : CTTC--TTT-AC--TTCATA-AAATGCGCCC-CC--T-ATat
gi|9 : AATGCGCCC-C---T-ATTGGTTGACTT-GGGCGTCC-GCTT-ATGGTGTCAAAGATG------------TATGTTGA---TTAC-------------GTTTTACGTTCGTT-AA-A--CATT-----TATGT---ATGT-TGGTTGTG-AA-TTATGTATGTTTGTCTAAGATTT-TTGTTTGTTAAACATTTAGACCCGT-TTGT-TTG-AATA-TCAAA--------TGTT-CGATT-AAA--TT-G-AAAGATCGTTGATTGTACA-TTT-TTCGC--TTGTT-AAATTA--CAATTTA---------CATTGATTTA----TTTTGC---AACAG--T-TGT-
gi|14 : TT-GGGCGTCC-GCTT-GTGGTGTCAACGATGTGTTTTACGTTTTACGTTTACGTTTACGTTATGTGATTACGTTTTACGTTCGTTAAATAATCATT-----TACGTATCATGT-TGGTTGTG-AATTTATGTATGTTTGT
gi|12 : GATG------------TATGTTGA---TTAC-------------GTTTTACGTTCGTTAAA----CATTAATTTTATGT---ATGT-TGATTGTG-AATTTATGTTTGTTTGTCTAAGATTTCTTGTTTGTTAAACATTTAGACCCGT-TGGT-TTG-AATA-TCAAA--------TGTT-CGATT-AAA--TT-GCAAAGATCGTTGATTGTACA-TTT-TTCGC--TTGTT-AAATTA--CAATTTA---------CATTG----A----TTTTGCA--A--AG--T-TGT-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATA
gi|13 : TAATATTTCTTGTTTGTTAAACATTTAGACCcc
gi|15 : ttA--------TGTTTCGATTTAAA--TTTGCAAAGATCGTTGATTGTACA-TTTATTCGCTTTTGTTAAAATTAACCAATTTA---------CATTG----A-----TTTGCAAAA--AG--T-TGT-AATTT--------TTG-----CCCGTTTCCGC-CGCCCATAtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcatttttgccctttccgccgcccatag
gi|21 : CA-TTT-TTCGC--TTGTT-AAATTA--CAATT-A---------CAT-G----A----TTTTGCA--A--AG--T-TGT-CA-TT--------TTG-----CCC-TTTCCGC-CGCCCATAca
gi|16 : CA-TTT-TTCGC--TTATT-AACTTA--CAATTTGGAGCAATGTCAATG----AGCAGTTTTGCA--A--AG--T-TGTCCATCTATCCTACATTGACACACCT-GTTCCGCACGCCCATActt
gi|25 : TG----A----TT-------A--AG--TATG--CATTT--------TTG-----CCC-TTTCCGC-CGCCCATc
gi|13 : T-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATAtaatatat
gi|29 : tttaatatttcttgtttgttaaacatttagacctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATAg
gi|28 : gggactct-CATTT--------TTG-----CCC-TTTCCGC-CGCCCATA
gi|27 : TTT--------TTG-----CCC-TTTCCGC-CGCCCATAgatgaccc
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|22 ): TGTATAATTCAATGACATATCCAGAGGACGGGGTAGGGGTGGCCCCAGGAGTTGTAACCCCCCCCCCCCCC
Alignments
lowQualScore : 1111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111111 222222222 22222222 555555 1 1 1 1 0000000000000000000 11 44444444 111 111111 555555555555 777777777777777777777777777777777777777777777777777777777777777777777777777777 111 22222222 22222222222 111111 222222222222 11 33333 11 1 1111111111111111 222222222222222222222 000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 1111 11 1 333333333 222222 11111 22222 11 1 55555555555555555555555555555555555555555555555555555555555 1 11111111 11 1 1111
lowQualScore : 3 3 77777 11111111 3 4 8 66 9999 0 000000000 3 66 5 66 5 6 6 6 44444444 8 2 0 0 222222 0 2 0 2 0 2 0 2 0 5555555555555555555 33 22222222 0 8 8 8 3 1 111 1 999999 333333333333 6 6 6 3 6 888888888888888888888888888888888888888888888888888888888888888888888888888888 5 000 5 5 22222222 888 5 88888888888 5 5 444444 5 0 999999999999 33 1 5 1 5 5 5 5 5 99 6 6 22222 8 11 0 66 3 2 1 5 55 4 4 55 8888888888888888 4 8888 777777777777777777777 1 777777777777777777777777777777777777777777777777777777777777777777777777777777777777 8 8 3 66 8 0 0 2222 8 99 8 6 8 222222222 333333 3 77777 3 55555 33 0 11111111111111111111111111111111111111111111111111111111111 3 6 8 8 8 99 99 77 0 5 5 66666666 66 5 888 5 3 0 11 77 4 888 5 5 5 5 5 99 2 3 4444 7 77
lowQualScore : . . ..... ........ . . . .. .... . ......... . .. . .. . . . . ........ . . . . ...... . . . . . . . . . ................... .. ........ . . . . . . ... . ...... ............ . . . . . .............................................................................. . ... . . ........ ... . ........... . . ...... . . ............ .. . . . . . . . . .. . . ..... . .. . .. . . . . .. . . .. ................ . .... ..................... . .................................................................................... . . . .. . . . .... . .. . . . ......... ...... . ..... . ..... .. . ........................................................... . . . . . .. .. .. . . . ........ .. . ... . . . .. .. . ... . . . . . .. . . .... . ..
lowQualScore : 1 1 77777 22222222 3 4 9 11 4444 4 000000000 2 99 0 99 0 7 7 7 22222222 0 5 8 8 000000 8 5 0 5 0 5 0 5 0 0000000000000000000 88 44444444 8 0 0 0 5 7 777 8 222222 333333333333 7 7 7 2 7 000000000000000000000000000000000000000000000000000000000000000000000000000000 7 000 7 7 33333333 666 7 33333333333 7 7 000000 7 7 333333333333 66 4 7 4 0 7 7 7 7 22 7 7 66666 0 00 0 22 2 5 8 0 55 0 0 55 8888888888888888 0 5555 000000000000000000000 0 888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 0 2 22 0 8 8 2222 0 00 0 0 0 000000000 000000 2 55555 2 00000 88 0 88888888888888888888888888888888888888888888888888888888888 3 7 0 0 0 22 22 99 1 7 7 44444444 99 0 888 0 2 7 44 11 9 666 7 7 7 7 7 22 5 3 2222 3 55
consensus : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AA--------CATTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--A-ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCC-AAGTCAACCAAT-AGG-GGGCGCATTT-TATGAAG-TAAAGAAGCG----GAACTTATCGAAAT--TGAGACATGCGCATCAACAG-AATA---ATAAGTAAA-GAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----C-A-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAAC----CCCC----C-------T-CGAT---TTTGTTTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCNNNNNNCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG--C-TT-CGC--TTCA-TTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
Reference ( family-480 ) : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AA--------CATTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT----ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCC-AAGTCAACCAAT-AGG-GGGCGCATTT-TATGAAG-AAAA-----G----GAA-TTATCGAAAT--TGAGACATGCGCATCAACAG-AATA---ATAAGTAAA-GAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----C-A-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAAC----CCCC----C-------T-TGAT---TTTGTTNTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCNNNNNNNGGGGGGTTGA-GCT-TGTGTTTTCT-TTCCGGATACAATTTTG--C-TT-CGC--TTCA-TTTTTT-CTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|1 : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AA--------CATTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACATGTACATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGTCC-AAGTCAACCAAT-AGG-GGGCGCATTT-TATGAAG-------------------TTATCGAAATATTGAGACATACGCATCAACAG-AATATAAATAAGTAAAAGAT-GGGGACAGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCAAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTCTTTTT-T---TTTTCAAA-GGGCGG-GGATT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----CCA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTAATA--AAATTCAACTA--------A-AGTCAGCCTCC-GGTA-TTAGTT-T-TTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAAC----CCCC----C-------T-TGAT---TTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGGGGTTGA-GCT-TGTGTTTTCT-TTCCGGATACAATTTTG--C-TT-CGC--TTCA-TTTTTT-CTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGT-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTTGTTGTG-AATTTATGTATGTTTGTATAAGATTTCTTA-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA--GTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|10 : TGGAGGATCTAG--A-GAG--GGG---TTA----------CGGGAGTT-GCAAC----CCCCCAAAC-------C-CCAT---TT-GATTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNN-N-TGCT--CT-TTCCGGATACAATTTTC--CTTT-CGT--TTCATTTTTTT-CTGTAC-A---------TAAT------
gi|11 : tacaaaagatgcattgcaacacattgaacacatggaaaccTCTTTTT-C---TTTT-AAA-GGGCGGTGGGTT-TTCTAGACCCAC--GCAA-CTGTCCCATTGAA--TCCGGC-A-TTTCAA-GATTCCTTT---ATCATCGTGGATA------------AGCTCTTGCTG-AGATTGTT-TAT-AAATTCAACTATAG-A--TA-AGCCAGCTTCCTGGTA-TTAGTT-TCCTGCTTTGGGTTAACTTGTAGAA-ATTCCATGGTCAATGGTG--TAGTAATTTCAG
gi|12 : ctttctttcttcgtctcctGTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AA--------CATTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACAAACATAAATTCACAATCAACATACATAAA-ATTAATGTTTAACGAACGTAAAACGTAATCAACATACATCaaaaaaaaagc
gi|13 : GGTCTAAATGTTTAACAAACAAGAAATATTAAAc
gi|13 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-Atnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcatttttgccctttccgccgcccatag
gi|14 : tttaatatttcttgtttgttaaacatttagacctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGGGCGTCC-GC-TTGTGGTGTCAACGATG--TGTT--TTACGTTTTACGTTT--------A--CGTT--TACGTTAT---G-TGATTACG---TTT---TACGTTCGT-TAAA--------------TAATCATTTACGTATCATGT-TGGT-TGTG-AATg
gi|14 : TATGT-GATTACGTTTTACGTTCGTTAAATAAT-CATT--TACG-TATCATGTTGGTTGTG-AATTTATGTATGTTTGTttatgtatgtttgt
gi|15 : ttgggcgtccgcttgtggtgtcaacgatgtgttttacgttttacgtttacgtttacgtGTATGGGCG-GCGGAAACGGG-----CAA--------AAATT-ACA-A-CTTTTTGCAAA-----TCAATG---------TAAATTGGTTAATTTTAACAAAAGCGAATAAATGTACAATCAACGATCTTTGCAAATTTAAATCGAAA--------CAT
gi|16 : GTATGGGCGTGCGGAAC-AGGTGTGTCAATGTAGGATAGATGGACA-A-CTTT--GCAAAACTGCTCATTGACATTGCTCCAAATTG--TAAGTT-AATAA--GCGAA-AAATGa
gi|17 : TCTCTTTTGAT---TTTTCAAA-AGGAGG-GGGT----------------GCAA-C----CCATTGAA--T----C-AATTTCAC-GATT-CTTT---AA-ATC-TGGAAA------------AGTTCTTACTGTAGATTGT
gi|18 : ctctcATA--AAATTCAACTATAG-AATTATAGTCAACCTCC-GGTA-TTAGTT-T-CTGCT
gi|19 : ttttaaaatctttnnnnnnnnnnnnnnnnnnnnnnnnntAAATAGA------ATTACATGTA------TGTACTGAAAAAA-T-GAAACGAAAGCAAAA-TTGTATCTGGAGAGCA-AA
gi|2 : tTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACTTT--GCAAAA----TCAATA---------TAAATTA--TAATCT-AACCA--ACGAA-AAAAAGACAATCAACGATCTT--C-AATTT-AATCG-AA--------CATTTG-ATATTCAAACCTAC-GGTCTAAAAGTTTAACAAAC-AGAAAT-TTAGACAAACATACATAAA--CACAACCAACATACA-------AAATGTTTAACGAACGTAAAACGTAATCAA-ACATATCTTTGACACCACAA-CGGACGCCCAAAGTCAA-CAATCAGGAGGGCG-ATTTCTATGAAGTAAAA-----GAAGCGAACTTATCGAAAT--TGAGACATGCGCATCAACAG-AAT-----CAAGT-AA-GAT-GG---CGCA-AAAATATGCAGGCTTC-GTTCTAA--CT---ATATTA-TTATCATACTAAAAGAGA------ATTA------------TGTACAGAAAAAA-TGGAAGCGAAAGCAAAATTTGTATCCGGAAAGAA-AACACAAtaaatccagataaaaaagtt
gi|2 : cCTTTTC-T---TTTGCAAA-GGGCGG-GG--T-C----AACCCCCCTGCAAACTGTCC-ATTGAAACC----C-A-TTTCAA-CATT-CTTT---ATGATC-TG-ATA------------A-CTCTTGCTATAGAT-GTCATAGAAAATTCAACTATAGGAATTATAGTCAGCC-CC-GGTA-TTAGTTCT-CT--TCT--GTT-ACTTGTAGAA-AATCCATC-TC-AT-GTGATTA-TAATT-AAGCTTTAATCCTGTATGAAT-CATTGCAGAATCTAG--A-G-G--GGT---TCA----------CGGGG-TT-GCAAC----CCCC----C-------TGTGAT---TTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC--------GGGGGTTGA-GCTATGTATTTGCT-TTCCGGATACAATTTTG--C-TTTCGCC-TTCA-TTTTTTTCTGTACCA---------TAAT------TCT-TTTGGCTATGATAACAAACATATAAGTT-A-----GAA--CTG-AA-------GCC-----------TGCATGATTTGCCTCCCCATC----TTTATTATTTGTTGATGCGCGATGTCTCAATTT-GAT-AAGTTCCC-GC-TC--TGTACTTTTCATAAAAATCGCCCCC--TATGGGTT-ACCTTGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACG-TTTACGTTCGTTTAA--ACGCATT--TATG-TAT---GTTGGTTGTGAAATTTATGTATGTTTGTCTAAGATTCGTTG-TTTG-TAAACATTTA---ACC-CG--TGGTGT-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCG-TGATT-TACA-TTTTTCGCTTTTTAAATTACAATTTACATT-----ATTTT-CAA-tgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcttttgcaaagggcggggtcaacccccctgcaaactgtccattgaaacccatttcaacattctttatgatctgataactcttgctatagatgtcatagaaaattcaactataggaattatagtcagccccggtattagttctcttctgttacttgtagaaaatccatctcatgtgattataattaagctttaatcctgtatgaatcattgcagaatctagaggggttcacggggttgcaacccccctgtgattttgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgggggttgagctatgtatttgctttccggatacaattttgctttcgccttcatttttttctgtaccataattcttttggctatgataacaaacatataagttagaactgaagcctgcatgatttgcctccccatctttattatttgttgatgcgcgatgtctcaatttgataagttcccgctctgtacttttcataaaaatcgccccctatgggttaccttggcgtccgcttgtggtgtcaaagatgtatgttgattacgtttacgttcgtttaaacgcatttatgtatgttggttgtgaaatttatgtatgtttgtctaagattcgttgtttgtaaacatttaacccgtggtgttgaatatcaaatgttcgattaaattgcaaagatcgtgatttacatttttcgctttttaaattacaatttacattattttcaa
gi|20 : ctatgggcggcggaaagggcaaaaatgacaaactttgcaaaatcaatataaattataatctaaccaacgaaaaaaagacaatcaacgatcttcaatttaatcgaacatttgatattcaaacctacggtctaaaagtttaacaaacagaaatttagacaaacatacataaacacaaccaacatacaaaatgtttaacgaacgtaaaacgtaatcaaacatatctttgacaccacaacggacgcccaaagtcaacaatcaggagggcgatttctatgaagtaaaagaagcgaacttatcgaaattgagacatgcgcatcaacagaatcaagtaagatggcgcaaaaatatgcaggcttcgttctaactatattattatcatactaaaagagaattatgtacagaaaaaatggaagcgaaagcaaaatttgtatccggaaagaaaacacaatgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGAGTGCATTGGCGGATTTAG--A-G-G--GGG---TT------------GGGGGTT-GCAACACCTCCCC----C-------T-T--T---TCTTTTTT
gi|21 : gaaaaatagtGTATGGGCG-GCGGAAA-GGG-----CAA--------AA-TG-ACA-A-CTTT--GCAAAA----TCA-TG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAATGactta
gi|22 : TGTATAATT-CAATGACATATCCAG--A-G-GACGGG---GTAGGGGTGGCCCCAGGAGTT-GTAAC----CCCC----C-------tt
gi|23 : T-CATTGGCG-ATTTAGGGA-G-G--GGGAGGCTG----------TGGGAGTT-GCAAC----CCCC----T-------C-CCCT---TTTTTTTTTcccccccc
gi|24 : -CAATGGCGGATCTAG--A-G-A--GGAGA-TTA----------CGGGATTC-GCAAC----CCCC----T-------T-Taa
gi|25 : tgATGGGCG-GCGGAAA-GGG-----CAA--------AAATG--CATA-CTT-------AA----TCA
gi|26 : GTGGATCTAG--ATG-G--GAG---TTA----------TGGGGGTT-GCAAC----CCCC----taatatat
gi|27 : aTATGGGCG-GCGGAAA-GGG-----CAA--------AAAtcc
gi|28 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gataacacta
gi|29 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gatgaccc
gi|3 : gggactctTGCGCATCAACCGCGAGA---ATAAGTAAA-GAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATTTTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAG-A-AACACAAGCTCAA
gi|3 : TTTTT-T---TTTTCAAA-GGGCGG-GGGTTTC----AACCCCC--GCAA-CTGTCCCAT-------------A-TCT--G-GATT-T----------------ATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT---------TG--TA------------TGAATC------------ATTGGCAGATCTAG--A-G-G--GGG---TTA----------CTGGGGTT-GCAAC----CCCC----CACCCCCTT-TGAT---TTTGTaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|3 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AA--------CATTTGAATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGAC-AACATACATAAATTCACAACCAACATAC------ATAAATGTTTAA-GAACGTAAAACGTAATCAAC-TACATCTTTGACACCACAAGCGGACGCCC-AAGTCAACCAAT-A-G-GGGCGCATTT-TATGAAG-TAAAGAAGCG----GAACTTATCGAAAT--TGAGACATGCGCATCAACAG----A---ATAAGTAAA-GATGGGGGACGGCAAAAATATGCAGGCTTCAGTTCTAAACTTTTAATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAG-AAAAA-T-GAAGCGAAATCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|30 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATga
gi|4 : TTTTT-T---TTTTCAAAAGGGCGG-GGGTTTC----AACCCC---GCAA-CTGTCCCATTGAA--C----C-A-TTTCAAAGATT-CTTT---AT-ATC-TGGATA-------------GCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCTTC--GGTAATTAGTT-T-CTGCTT---GTT-ACTTGTAGAAGAATCCAT---C-AT-GTG--TAGTAATTTAAGCTTTA-TCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGGG--TTA----------CGGGGGTTTGCAAC----CCCC----C-------C-CCCCCCCTTTGATTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG------TGA-GCT-GGT-TTTTCT-TTCCGGATACATTTTTGGCT-TT-CGC--TTCA-TTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTAGAACCGAAGCCTG-CATATTTTGGCCGACCCCATCTTTACTT-------------ATTCTGTT------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCAT-AAATGCG-CCCC--TATTGGTTGACTTGGGCGTCC-GCTTTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTT--A--A--CA-T--TATG-TAT---GTTGG-TGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG--TTGTTAAACATTTA-G-A-C-CGT-TGGT-T-TG-AATATCAAATGTTCGATT-AA--TTGCAAAGATCGTTGATTGTACATTTTTTCGCTTGTTAAATTACAATTTACATTG----A-TTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|5 : tTCTCTCTCT-TAATTTTTCAAA-G--CGG-GTG---C----AACCCCC--GCAA-CTCCACCACTGAA------------TTCAA-GATT-CTTTTTTAT-ATA-TGGATACATCGCTGTTTAAGCTATAGCTGTAGATTGTCATA--AAATTCGACTAGAG-AATTATAGTCAGCCTCT-GGTA-TTAGTT-T-CTGCTTT--TTT-ACTTGTAGAA-Ac
gi|5 : tctctcAAATATGCAGGCTTCAGTTCTAAAC--------TTAGTTATCATAGCCATATAGACACAATGTTAACTTCGCCTATTTGTACAAAAAAAATT-GAAACAAAAGTACAC-TTGTATCCGGAAAGAGCAAAACAAGtatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|5 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagGAGGGTTGAAGCT-TGT-TTTGCTCTTCCGGA-ACAATTT-A--C-TT-TGTGTTTCA-ATTTTT-TTGTAC-AAATAGCAAGTAACATTGTGTCTATATGGCTATGATAAC-------TAAGTTTA-----GAA--CTGAAA-------GCC-----------TGCAtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|6 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagaaatatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgaTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACAAAAAGTCATTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAATCAAGAAATCTTAGACAAACATACATAAATTCAAAACCAACATAC------ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCC-AAGTCAACCAAT-AGG-GGGCGCATTT-TATGAAG-TAAAGAAGCG----GAATTTATCGAAAT--TGAGACATGCGCATCAACAG----A---ATAAGTAAA-GAT--GGGACGGC-AAAATATGCAGGCTTCAGTTCAAGTTTT---ACGTTCGTT
gi|7 : AT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGC-TCC-GC-TTGTGGTGTCAAAGATGTAAGTTGAT-ACGTTTTACGTTCGTTAAA-----CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACATTTTTTCGCTTGTTAAATTACAA-TTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|8 : GATGAAGTT-CCCGCTTCCGTTTAC--TTCATAAAATGCTCCCCCGGTATTGGTTGAC-TGGGCGTCCGGC-T--------------TGTATGTTGATTACGTTTTACGTTCGTTAAA--A--C-TTCATGTG-TAT---GTT-GTTGTG-AA--TATGTATGTTTGTCT-AGATT--TTGATTTGGTAAACATTAG-G-ACC-CGTCTGGT-T-TGAAATATCCAATGTTCGA-TAAACGTTGCAAAGATCGTTGATTTTACA-TTTTTCGCTTG-TAAATTACAATTTACA-TG----A-TTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATAat
gi|9 : acaAATGCGCCCC---TATTGGTTGACTTGGGCGTCC-GC-TTATGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTT-AA--A--CATT--TATG-TAT---GTTGGTTGTG-AA-TTATGTATGTTTGTCTAAGATTT-TTG-TTTGTTAAACATTTA-G-ACC-CGT-TTGT-T-TG-AATATCAAATGTTCGATTAAA--TTG-AAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTGATTTATTTTGCAACAGTTGTa
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111111 222222222 22222222 33333333333 1 11 44444444 111 111111 555555555555 777777777777777777777777777777777777777777777777777777777777777777777777777 111 22222222 3333333 111111 222222222222 11 33333 11 1 1111111111111111 3333333333333 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 11 1 11 333333333 222222 11111 22222 11 1 55555555555555555555555555555555555555555555555555555555555 1 11 11 11111111 11 1 1111
lowQualScore : 3 3 77777 11111111 3 4 8 66 9999 0 000000000 3 66 5 66 5 6 6 6 44444444 8 2 0 0 77777777777 0 2 0 2 8 8 8 88 8 0 33 22222222 88 8 8 3 1 111 1 999999 333333333333 6 6 6 3 6 555555555555555555555555555555555555555555555555555555555555555555555555555 5 000 5 5 22222222 888 5 1111111 5 5 5 444444 5 0 999999999999 33 1 5 1 1 5 5 5 5 99 6 6 22222 8 11 0 66 3 2 1 5 55 4 4 55 8888888888888888 4 1111111111111 3 44444444444444444444444444444444444444444444444444444444444444444444444444444444444 8 8 3 44 8 0 0 11 6 99 6 8 222222222 333333 3 77777 3 55555 33 0 11111111111111111111111111111111111111111111111111111111111 3 6 8 8 8 0 11 11 0 99 0 5 5 66666666 66 5 888 5 3 0 11 77 4 888 5 5 5 5 5 99 2 3 4444 7 6
lowQualScore : . . ..... ........ . . . .. .... . ......... . .. . .. . . . . ........ . . . . ........... . . . . . . . .. . . .. ........ .. . . . . ... . ...... ............ . . . . . ........................................................................... . ... . . ........ ... . ....... . . . ...... . . ............ .. . . . . . . . . .. . . ..... . .. . .. . . . . .. . . .. ................ . ............. . ................................................................................... . . . .. . . . .. . .. . . ......... ...... . ..... . ..... .. . ........................................................... . . . . . . .. .. . .. . . . ........ .. . ... . . . .. .. . ... . . . . . .. . . .... . .
lowQualScore : 1 1 77777 22222222 3 4 9 11 4444 4 000000000 2 99 0 99 0 7 7 7 22222222 0 5 8 8 44444444444 8 5 0 5 0 0 0 88 8 2 88 44444444 88 0 0 5 7 777 8 222222 333333333333 7 7 7 2 7 000000000000000000000000000000000000000000000000000000000000000000000000000 7 000 7 7 33333333 666 7 0000000 7 7 7 000000 7 7 333333333333 66 4 7 4 4 7 7 7 7 22 7 7 66666 0 00 0 22 2 5 8 0 55 0 0 55 8888888888888888 0 2222222222222 6 11111111111111111111111111111111111111111111111111111111111111111111111111111111111 0 0 2 66 0 8 8 00 0 00 0 0 000000000 000000 2 55555 2 00000 88 0 88888888888888888888888888888888888888888888888888888888888 3 7 0 0 0 8 00 00 8 22 1 7 7 44444444 99 0 888 0 2 7 44 11 9 666 7 7 7 7 7 22 5 3 2222 3 7
consensus : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--A---ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC----C-CCCT---TTTGNTTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCNNNNNNCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG--CTTTCGC--TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
Reference ( family-480 ) : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--A---ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC----T-CGAT---TTTGTTTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCNNNNNNCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG--CTT-CGC--TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|1 : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--GTACATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGTCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAG---------------TTATCGAAATATTGAGACATACGCATCAACAG-AATATAAATAAGTAAAAGAT-GGGGACAGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCAAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTCTTTTT-T---TTTTCAAA-GGGCGG-GGATT-C----AACCCCC--GCAA-CTGTCCCATTGAAC-C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTAATA--AAATTCAACTA-A--------AGTCAGCCTCC-GGTA-TTAGTT-T-TTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC----T-TGAT---TTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGGGGTTGA-GCT-TGTGTTTTCT-TTCCGGATACAATTTTG--CTT-CGC--TTCA-TTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGT-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTTGTTGTG-AATTTATGTATGTTTGTATAAGATTTCTTA-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGC-A-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|10 : TGGAGGATCTAG--A-GAG--GGG---TTA----------CGGGAGTT-GCAACCCCCCAAACC-CCAT---TT-GATTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNN-N-TGCT--CT-TTCCGGATACAATTTTC--CTTTCGT--TTCATTTTTTTCTGTAC-A---------TAAT------
gi|11 : tacaaaagatgcattgcaacacattgaacacatggaaaccCTCCTTCTTTT-T---CTTTTAAA-GGGCGGTGGGTT-TTCTAGACCCAC--GCAA-CTGTCCCATTGAA--TCCGGCA-TTTCAA-GATTCCTTT---ATCATCGTGGATA------------AGCTCTTGCTG-AGATTGTT-TAT-AAATTCAACTATAG-A--TA-AGCCAGCTTCCTGGTA-TTAGTT-TCCTGCTTTGGGTTAACTTGTAGAA-ATTCCATGGTCAATGGTG--TAGTAATTTCAG
gi|12 : ctttctttcttcgtGTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACAAACATAAATTCACAATCAACATACATAAA---ATTAATGTTTAACGAACGTAAAACGTAATCAACATACATCaaaaaaaaagc
gi|13 : GGTCTAAATGTTTAACAAACAAGAAATATTAAAc
gi|13 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-Atnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcatttttgccctttccgccgcccatag
gi|14 : tttaatatttcttgtttgttaaacatttagacctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGGGCGTCC-GC-TTGTGGTGTCAACGATG--TGTT--TTACGTTTTACGTTT--------A--CGTT--TACGTTAT---G-TGATTACG---TTT---TACGTTCGT-TAAA--------------TAATCATTTACGTATCATGT-TGGT-TGTG-AATg
gi|14 : TATGT-GATTACGTTTTACGTTCGTTAAATAAT-CATT--TACG-TATCATGTTGGTTGTG-AATTTATGTATGTTTGTttatgtatgtttgt
gi|15 : ttgggcgtccgcttgtggtgtcaacgatgtgttttacgttttacgtttacgtttacgtGTATGGGCG-GCGGAAACGGG-----CAA--------AAATT-ACA-A-CTTTTTGCAAA-----TCAATG---------TAAATTGGTTAATTTTAACAAAAGCGAATAAATGTACAATCAACGATCTTTGCAAATTTAAATCGAAACA--------T
gi|16 : GTATGGGCGTGCGGAAC-AGGTGTGTCAATGTAGGATAGATGGACA-A-CTTT--GCAAAACTGCTCATTGACATTGCTCCAAATTG--TAAGTT-AATAA--GCGAA-AAATGa
gi|17 : TCTCTTTTGAT---TTTTCAAA-AGGAGG-GGGT----------------GCAA-C----CCATTGAA--T----CAATTTCAC-GATT-CTTT---AA-ATC-TGGAAA------------AGTTCTTACTGTAGATTGT
gi|18 : ctctcATA--AAATTCAACTATAG-AATTATAGTCAACCTCC-GGTA-TTAGTT-T-CTGCT
gi|19 : ttttaaaatctttnnnnnnnnnnnnnnnnnnnnnnnnntAAATAGA------ATTACATGTA------TGTACTGAAAAAA-T-GAAACGAAAGCAAAA-TTGTATCTGGAGAGCA-AA
gi|2 : tTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACTTT--GCAAAA----TCAATA---------TAAATTA--TAATCT-AACCA--ACGAA-AAAAAGACAATCAACGATCTT--C-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCTACGG-TCTAAAAGTTTAACAAACA-GAAAT-TTAGACAAACATACATAAA--CACAACCAACATACA---------AAATGTTTAACGAACGTAAAACGTAATCAA-ACATATCTTTGACACCACAA-CGGACGCCCAAAGTCAAC-AATCAGGAGGGCG-ATTTCTATGAAGTAAAAGAAGC-GAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT-----CAAGT--AAGAT-GG---CGCA-AAAATATGCAGGCTTC-GTTCTAA--CT---ATATTA-TTATCATACTAAAAGAGA------ATTA------------TGTACAGAAAAAA-TGGAAGCGAAAGCAAAATTTGTATCCGGAAAGAA-AACACAAtaaatccagataaaaaagtt
gi|2 : cCTTTTC-T---TTTGCAAA-GGGCGG-GG--T-C----AACCCCCCTGCAAACTGTCC-ATTGAAACC----CA-TTTCAA-CATT-CTTT---ATGATC-TG-ATA------------A-CTCTTGCTATAGAT-GTCATAGAAAATTCAACTATAGGAATTATAGTCAGCC-CC-GGTA-TTAGTTCT-CT--TCT--GTT-ACTTGTAGAA-AATCCATC-TC-AT-GTGATTA-TAATT-AAGCTTTAATCCTGTATGAAT-CATTGCAGAATCTAG--A-G-G--GGT---TCA----------CGGGG-TT-GCAACCCCCC----TGTGAT---TTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC--------GGGGGTTGA-GCTATGTATTTGCT-TTCCGGATACAATTTTG--CTTTCGCC-TTCATTTTTTTCTGTACCA---------TAAT------TCT-TTTGGCTATGATAACAAACATATAAGTT-A-----GAA--CTG-AA-------GCC-----------TGCATGATTTGCCTCCCCATC----TTTATTATTTGTTGATGCGCGATGTCTCAATTT-GAT-AAGTTCCC-GC-TC--TGTACTTTTCATAAAAATCGCCCCC--TATGGGTT-ACCTTGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACG-TTTACGTTCGTTTAA--ACGCATT--TATG-TAT---GTTGGTTGTGAAATTTATGTATGTTTGTCTAAGATTCGTTG-TTTG-TAAACATTTA---ACC-CG--TGGTGT-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCG-TGATT-TACA-TTTTTCGCTTTTTAAATTACAATTTACATT-----ATTTT-CAA-tgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcttttgcaaagggcggggtcaacccccctgcaaactgtccattgaaacccatttcaacattctttatgatctgataactcttgctatagatgtcatagaaaattcaactataggaattatagtcagccccggtattagttctcttctgttacttgtagaaaatccatctcatgtgattataattaagctttaatcctgtatgaatcattgcagaatctagaggggttcacggggttgcaacccccctgtgattttgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgggggttgagctatgtatttgctttccggatacaattttgctttcgccttcatttttttctgtaccataattcttttggctatgataacaaacatataagttagaactgaagcctgcatgatttgcctccccatctttattatttgttgatgcgcgatgtctcaatttgataagttcccgctctgtacttttcataaaaatcgccccctatgggttaccttggcgtccgcttgtggtgtcaaagatgtatgttgattacgtttacgttcgtttaaacgcatttatgtatgttggttgtgaaatttatgtatgtttgtctaagattcgttgtttgtaaacatttaacccgtggtgttgaatatcaaatgttcgattaaattgcaaagatcgtgatttacatttttcgctttttaaattacaatttacattattttcaa
gi|20 : ctatgggcggcggaaagggcaaaaatgacaaactttgcaaaatcaatataaattataatctaaccaacgaaaaaaagacaatcaacgatcttcaatttaatcgaacatttgatattcaaacctacggtctaaaagtttaacaaacagaaatttagacaaacatacataaacacaaccaacatacaaaatgtttaacgaacgtaaaacgtaatcaaacatatctttgacaccacaacggacgcccaaagtcaacaatcaggagggcgatttctatgaagtaaaagaagcgaacttatcgaaattgagacatgcgcatcaacagaatcaagtaagatggcgcaaaaatatgcaggcttcgttctaactatattattatcatactaaaagagaattatgtacagaaaaaatggaagcgaaagcaaaatttgtatccggaaagaaaacacaatgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGAGTGCATTGGCGGATTTAG--A-G-G--GGG---TT------------GGGGGTT-GCAACACCTC----C-CCCT---TTTCTTTTT
gi|21 : gaaaaatagtGTATGGGCG-GCGGAAA-GGG-----CAA--------AA-TG-ACA-A-CTTT--GCAAAA----TCA-TG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAATGtactta
gi|22 : TGTATAATT-CAATGACATATCCAG--A-G-GACGGG---GTAGGGGTGGCCCCAGGAGTT-GTAACCCCCC----C-Ctt
gi|23 : T-CATTGGCG-ATTTAGGGA-G-G--GGGAGGCTG----------TGGGAGTT-GCAACCCCCT----C-CCCT---TTTTTTTTTcccccc
gi|24 : -CAATGGCGGATCTAG--A-G-A--GGAGA-TTA----------CGGGATTC-GCAACCCCCT----T-aa
gi|25 : tgATGGGCG-GCGGAAA-GGG-----CAA--------AAATG--CATA-CTT-------AA----TCAt
gi|26 : GTGGATCTAG--ATG-G--GAG---TTA----------TGGGGGTT-GCAACCCCCtaatatat
gi|27 : aTATGGGCG-GCGGAAA-GGG-----CAA--------AAAtcc
gi|28 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gataacacta
gi|29 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gatgaccc
gi|3 : gggactctTGCGCATCAACCGCGAG---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATTTTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAG-A-AACACAAGCTCAA
gi|3 : TTTTT-T---TTTTCAAA-GGGCGG-GGGTTTC----AACCCCC--GCAA-CTGTCCCAT------------A-TCT--G-GATT-T----------------ATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT---------TG--TA------------TGAATC------------ATTGGCAGATCTAG--A-G-G--GGG---TTA----------CTGGGGTT-GCAACCCCCCA---C-CCCC---TTTGATTTTGTAaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|3 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTGAATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGAC-AACATACATAAATTCACAACCAACATAC--------ATAAATGTTTAA-GAACGTAAAACGTAATCAAC-TACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-A-G-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-------AATAAGT-AAAGATGGGGGACGGCAAAAATATGCAGGCTTCAGTTCTAAACTTTTAATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAG-AAAAA-T-GAAGCGAAATCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|30 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGga
gi|4 : TTTTT-T---TTTTCAAAAGGGCGG-GGGTTTC----AACCCC---GCAA-CTGTCCCATTGAA--C----CA-TTTCAAAGATT-CTTT---AT-ATC-TGGATA-------------GCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCTTC--GGTAATTAGTT-T-CTGCTT---GTT-ACTTGTAGAAGAATCCAT---C-AT-GTG--TAGTAATTTAAGCTTTA-TCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGGG--TTA----------CGGGGGTTTGCAACCCCCC----C-CCCCCCCTTTGATTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG------TGA-GCT-GGT-TTTTCT-TTCCGGATACATTTTTGGCTTT-CGC--TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTAGAACCGAAGCCTG-CATATTTTGGCCGACCCCATCTTTACTT-------------ATTCTGTT------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCAT-AAATGCG-CCCC--TATTGGTTGACTTGGGCGTCC-GCTTTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTT--A--A--CA-T--TATG-TAT---GTTGG-TGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG--TTGTTAAACATTTA-G-A-C-CGT-TGGT-T-TG-AATATCAAATGTTCGATT-AA--TTGCAAAGATCGTTGATTGTACATTTTTTCGCTTGTTAAATTACAATTTACATTG----A-TTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|5 : tTCTCTCTCT-TAATTTTTCAAA-G--CGG-GTG---C----AACCCCC--GCAA-CTCCACCACTGAA-----------TTCAA-GATT-CTTTTTTAT-ATA-TGGATACATCGCTGTTTAAGCTATAGCTGTAGATTGTCATA--AAATTCGACTAGAG-AATTATAGTCAGCCTCT-GGTA-TTAGTT-T-CTGCTTT--TTT-ACTTGTAGAA-Ac
gi|5 : tctctcAAATATGCAGGCTTCAGTTCTAAAC--------TTAGTTATCATAGCCATATAGACACAATGTTAACTTCGCCTATTTGTACAAAAAAAATT-GAAACAAAAGTACAC-TTGTATCCGGAAAGAGCAAAACAAGtatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|5 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagGAGGGTTGAAGCT-TGT-TTTGCTCTTCCGGA-ACAATTT-A--CTT-TGTGTTTCAATTTTTT-TGTAC-AAATAGCAAGTAACATTGTGTCTATATGGCTATGATAAC-------TAAGTTTA-----GAA--CTGAAA-------GCC-----------TGCAtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|6 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagaaatatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgaTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACAAAAAGTCATTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAATCAAGAAATCTTAGACAAACATACATAAATTCAAAACCAACATACAT--A---A---ATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAATTTATCGAA--ATTGAGACATGCGCATCAACAG-------AATAAGT-AAAGAT--GGGACGGC-AAAATATGCAGGCTTCAGTTCAAGTTTT---ACGTTCGTT
gi|7 : AT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGC-TCC-GC-TTGTGGTGTCAAAGATGTAAGTTGAT-ACGTTTTACGTTCGTTAAA-----CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACATTTTTTCGCTTGTTAAATTACAA-TTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|8 : GATGAAGTT-CCCGCTTCCGTTTAC--TTCATAAAATGCTCCCCCGGTATTGGTTGAC-TGGGCGTCCGGC-T--------------TGTATGTTGATTACGTTTTACGTTCGTTAAA--A--C-TTCATGTG-TAT---GTT-GTTGTG-AA--TATGTATGTTTGTCT-AGATT--TTGATTTGGTAAACATTAG-G-ACC-CGTCTGGT-T-TGAAATATCCAATGTTCGA-TAAACGTTGCAAAGATCGTTGATTTTACA-TTTTTCGCTTG-TAAATTACAATTTACA-TG----A-TTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATAat
gi|9 : acaAATGCGCCCC---TATTGGTTGACTTGGGCGTCC-GC-TTATGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTT-AA--A--CATT--TATG-TAT---GTTGGTTGTG-AA-TTATGTATGTTTGTCTAAGATTT-TTG-TTTGTTAAACATTTA-G-ACC-CGT-TTGT-T-TG-AATATCAAATGTTCGATTAAA--TTG-AAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTGATTTATTTTGCAACAGTTGTa
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111111 222222222 22222222 33333333333 1 11 44444444 111 111111 555555555555 777777777777777777777777777777777777777777777777777777777777777777777777777 111 22222222 3333333 111111 222222222222 11 33333 11 1 1111111111111111 111 1111 99999999999999999999999999999999999999999999999999999999999999999999999999999999 1 333333333 222222 11111 22222 11 1 55555555555555555555555555555555555555555555555555555555555 1 11 11 11111111 11 1 1111
lowQualScore : 3 3 77777 11111111 3 4 8 66 9999 0 000000000 3 66 5 66 5 6 6 6 44444444 8 2 0 0 77777777777 0 2 0 2 8 8 8 88 8 0 33 22222222 88 8 8 3 1 111 1 999999 333333333333 6 6 6 3 6 555555555555555555555555555555555555555555555555555555555555555555555555555 5 000 5 5 22222222 888 5 1111111 5 5 5 444444 5 0 999999999999 33 1 5 1 1 5 5 5 5 99 6 6 22222 8 11 0 66 3 2 1 5 55 4 4 55 8888888888888888 4 222 2222 1 33333333333333333333333333333333333333333333333333333333333333333333333333333333 22 7 8 8 3 44 8 0 0 8 0 8 8 6 8 222222222 333333 3 77777 3 55555 33 0 11111111111111111111111111111111111111111111111111111111111 3 6 8 8 8 0 11 11 0 99 0 5 5 66666666 66 5 888 5 3 0 11 77 4 888 5 5 5 5 5 99 2 3 4444 7 6
lowQualScore : . . ..... ........ . . . .. .... . ......... . .. . .. . . . . ........ . . . . ........... . . . . . . . .. . . .. ........ .. . . . . ... . ...... ............ . . . . . ........................................................................... . ... . . ........ ... . ....... . . . ...... . . ............ .. . . . . . . . . .. . . ..... . .. . .. . . . . .. . . .. ................ . ... .... . ................................................................................ .. . . . . .. . . . . . . . . . ......... ...... . ..... . ..... .. . ........................................................... . . . . . . .. .. . .. . . . ........ .. . ... . . . .. .. . ... . . . . . .. . . .... . .
lowQualScore : 1 1 77777 22222222 3 4 9 11 4444 4 000000000 2 99 0 99 0 7 7 7 22222222 0 5 8 8 44444444444 8 5 0 5 0 0 0 88 8 2 88 44444444 88 0 0 5 7 777 8 222222 333333333333 7 7 7 2 7 000000000000000000000000000000000000000000000000000000000000000000000000000 7 000 7 7 33333333 666 7 0000000 7 7 7 000000 7 7 333333333333 66 4 7 4 4 7 7 7 7 22 7 7 66666 0 00 0 22 2 5 8 0 55 0 0 55 8888888888888888 0 222 4444 0 66666666666666666666666666666666666666666666666666666666666666666666666666666666 66 2 0 0 2 66 0 8 8 0 8 0 0 0 0 000000000 000000 2 55555 2 00000 88 0 88888888888888888888888888888888888888888888888888888888888 3 7 0 0 0 8 00 00 8 22 1 7 7 44444444 99 0 888 0 2 7 44 11 9 666 7 7 7 7 7 22 5 3 2222 3 7
consensus : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--A---ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---CCCCT---TTTGATTTTGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG-CTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
Reference ( family-480 ) : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--A---ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---CCCCT---TTTGNTTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCNNNNNNCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG-CTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|1 : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--GTACATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGTCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAG---------------TTATCGAAATATTGAGACATACGCATCAACAG-AATATAAATAAGTAAAAGAT-GGGGACAGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCAAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTCTTTTT-T---TTTTCAAA-GGGCGG-GGATT-C----AACCCCC--GCAA-CTGTCCCATTGAAC-C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTAATA--AAATTCAACTA-A--------AGTCAGCCTCC-GGTA-TTAGTT-T-TTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---TTGAT---TTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGGGGTTGA-GCT-TGTGTTTTCT-TTCCGGATACAATTTTG-C-TT-CGC-TTCA-TTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGT-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTTGTTGTG-AATTTATGTATGTTTGTATAAGATTTCTTA-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGC-A-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|10 : TGGAGGATCTAG--A-GAG--GGG---TTA----------CGGGAGTT-GCAACCCCCCAAACCCCA---TTTGATTTTGTA-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNN-NNTGCT--CT-TTCCGGATACAATTTTC-CTTT-CGT-TTCATTTTTTTCTGTAC-A---------TAAT------
gi|11 : tacaaaagatgcattgcaacacattgaacacatggaaaccCTCCTTCTTTT-T---CTTTTAAA-GGGCGGTGGGTT-TTCTAGACCCAC--GCAA-CTGTCCCATTGAA--TCCGGCA-TTTCAA-GATTCCTTT---ATCATCGTGGATA------------AGCTCTTGCTG-AGATTGTT-TAT-AAATTCAACTATAG-A--TA-AGCCAGCTTCCTGGTA-TTAGTT-TCCTGCTTTGGGTTAACTTGTAGAA-ATTCCATGGTCAATGGTG--TAGTAATTTCAG
gi|12 : ctttctttcttcgtGTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACAAACATAAATTCACAATCAACATACATAAA---ATTAATGTTTAACGAACGTAAAACGTAATCAACATACATCaaaaaaaaagc
gi|13 : GGTCTAAATGTTTAACAAACAAGAAATATTAAAc
gi|13 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-Atnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcatttttgccctttccgccgcccatag
gi|14 : tttaatatttcttgtttgttaaacatttagacctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGGGCGTCC-GC-TTGTGGTGTCAACGATG--TGTT--TTACGTTTTACGTTT--------A--CGTT--TACGTTAT---G-TGATTACG---TTT---TACGTTCGT-TAAA--------------TAATCATTTACGTATCATGT-TGGT-TGTG-AATg
gi|14 : TATGT-GATTACGTTTTACGTTCGTTAAATAAT-CATT--TACG-TATCATGTTGGTTGTG-AATTTATGTATGTTTGTttatgtatgtttgt
gi|15 : ttgggcgtccgcttgtggtgtcaacgatgtgttttacgttttacgtttacgtttacgtGTATGGGCG-GCGGAAACGGG-----CAA--------AAATT-ACA-A-CTTTTTGCAAA-----TCAATG---------TAAATTGGTTAATTTTAACAAAAGCGAATAAATGTACAATCAACGATCTTTGCAAATTTAAATCGAAACA--------T
gi|16 : GTATGGGCGTGCGGAAC-AGGTGTGTCAATGTAGGATAGATGGACA-A-CTTT--GCAAAACTGCTCATTGACATTGCTCCAAATTG--TAAGTT-AATAA--GCGAA-AAATGa
gi|17 : TCTCTTTTGAT---TTTTCAAA-AGGAGG-GGGT----------------GCAA-C----CCATTGAA--T----CAATTTCAC-GATT-CTTT---AA-ATC-TGGAAA------------AGTTCTTACTGTAGATTGT
gi|18 : ctctcATA--AAATTCAACTATAG-AATTATAGTCAACCTCC-GGTA-TTAGTT-T-CTGCT
gi|19 : ttttaaaatctttnnnnnnnnnnnnnnnnnnnnnnnnntAAATAGA------ATTACATGTA------TGTACTGAAAAAA-T-GAAACGAAAGCAAAA-TTGTATCTGGAGAGCA-AA
gi|2 : tTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACTTT--GCAAAA----TCAATA---------TAAATTA--TAATCT-AACCA--ACGAA-AAAAAGACAATCAACGATCTT--C-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCTACGG-TCTAAAAGTTTAACAAACA-GAAAT-TTAGACAAACATACATAAA--CACAACCAACATACA---------AAATGTTTAACGAACGTAAAACGTAATCAA-ACATATCTTTGACACCACAA-CGGACGCCCAAAGTCAAC-AATCAGGAGGGCG-ATTTCTATGAAGTAAAAGAAGC-GAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT-----CAAGT--AAGAT-GG---CGCA-AAAATATGCAGGCTTC-GTTCTAA--CT---ATATTA-TTATCATACTAAAAGAGA------ATTA------------TGTACAGAAAAAA-TGGAAGCGAAAGCAAAATTTGTATCCGGAAAGAA-AACACAAtaaatccagataaaaaagtt
gi|2 : cCTTTTC-T---TTTGCAAA-GGGCGG-GG--T-C----AACCCCCCTGCAAACTGTCC-ATTGAAACC----CA-TTTCAA-CATT-CTTT---ATGATC-TG-ATA------------A-CTCTTGCTATAGAT-GTCATAGAAAATTCAACTATAGGAATTATAGTCAGCC-CC-GGTA-TTAGTTCT-CT--TCT--GTT-ACTTGTAGAA-AATCCATC-TC-AT-GTGATTA-TAATT-AAGCTTTAATCCTGTATGAAT-CATTGCAGAATCTAG--A-G-G--GGT---TCA----------CGGGG-TT-GCAACCCCCC-----------TGTGATTTTGT-TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGG-TTGA-GCTATGTATTTGCT-TTCCGGATACAATTTTG-CTTT-CGCCTTCATTTTTTTCTGTACCA---------TAAT------TCT-TTTGGCTATGATAACAAACATATAAGTT-A-----GAA--CTG-AA-------GCC-----------TGCATGATTTGCCTCCCCATC----TTTATTATTTGTTGATGCGCGATGTCTCAATTT-GAT-AAGTTCCC-GC-TC--TGTACTTTTCATAAAAATCGCCCCC--TATGGGTT-ACCTTGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACG-TTTACGTTCGTTTAA--ACGCATT--TATG-TAT---GTTGGTTGTGAAATTTATGTATGTTTGTCTAAGATTCGTTG-TTTG-TAAACATTTA---ACC-CG--TGGTGT-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCG-TGATT-TACA-TTTTTCGCTTTTTAAATTACAATTTACATT-----ATTTT-CAA-tgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcttttgcaaagggcggggtcaacccccctgcaaactgtccattgaaacccatttcaacattctttatgatctgataactcttgctatagatgtcatagaaaattcaactataggaattatagtcagccccggtattagttctcttctgttacttgtagaaaatccatctcatgtgattataattaagctttaatcctgtatgaatcattgcagaatctagaggggttcacggggttgcaacccccctgtgattttgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgggggttgagctatgtatttgctttccggatacaattttgctttcgccttcatttttttctgtaccataattcttttggctatgataacaaacatataagttagaactgaagcctgcatgatttgcctccccatctttattatttgttgatgcgcgatgtctcaatttgataagttcccgctctgtacttttcataaaaatcgccccctatgggttaccttggcgtccgcttgtggtgtcaaagatgtatgttgattacgtttacgttcgtttaaacgcatttatgtatgttggttgtgaaatttatgtatgtttgtctaagattcgttgtttgtaaacatttaacccgtggtgttgaatatcaaatgttcgattaaattgcaaagatcgtgatttacatttttcgctttttaaattacaatttacattattttcaa
gi|20 : ctatgggcggcggaaagggcaaaaatgacaaactttgcaaaatcaatataaattataatctaaccaacgaaaaaaagacaatcaacgatcttcaatttaatcgaacatttgatattcaaacctacggtctaaaagtttaacaaacagaaatttagacaaacatacataaacacaaccaacatacaaaatgtttaacgaacgtaaaacgtaatcaaacatatctttgacaccacaacggacgcccaaagtcaacaatcaggagggcgatttctatgaagtaaaagaagcgaacttatcgaaattgagacatgcgcatcaacagaatcaagtaagatggcgcaaaaatatgcaggcttcgttctaactatattattatcatactaaaagagaattatgtacagaaaaaatggaagcgaaagcaaaatttgtatccggaaagaaaacacaatgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGAGTGCATTGGCGGATTTAG--A-G-G--GGG---TT------------GGGGGTT-GCAACACCTC---CCCCT---TTTCTTTTT
gi|21 : gaaaaatagtGTATGGGCG-GCGGAAA-GGG-----CAA--------AA-TG-ACA-A-CTTT--GCAAAA----TCA-TG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAATGtactta
gi|22 : TGTATAATT-CAATGACATATCCAG--A-G-GACGGG---GTAGGGGTGGCCCCAGGAGTT-GTAACCCCCC---CCCCtt
gi|23 : T-CATTGGCG-ATTTAGGGA-G-G--GGGAGGCTG----------TGGGAGTT-GCAACCCCCT---CCCCT---TTTTTTTTTcccc
gi|24 : -CAATGGCGGATCTAG--A-G-A--GGAGA-TTA----------CGGGATTC-GCAACCCCCaa
gi|25 : tgATGGGCG-GCGGAAA-GGG-----CAA--------AAATG--CATA-CTT-------AA----TCAttt
gi|26 : GTGGATCTAG--ATG-G--GAG---TTA----------TGGGGGTT-GCAACCCCCT---CCtaatatat
gi|27 : aTATGGGCG-GCGGAAA-GGG-----CAA--------AAA
gi|28 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gataacacta
gi|29 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gatgaccc
gi|3 : gggactctTGCGCATCAACCGCGAG---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATTTTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAG-A-AACACAAGCTCAA
gi|3 : TTTTT-T---TTTTCAAA-GGGCGG-GGGTTTC----AACCCCC--GCAA-CTGTCCCAT------------A-TCT--G-GATT-T----------------ATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT---------TG--TA------------TGAATC------------ATTGGCAGATCTAG--A-G-G--GGG---TTA----------CTGGGGTT-GCAACCCCCCA--CCCCC---TTTGATTTTGTAaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|3 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTGAATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGAC-AACATACATAAATTCACAACCAACATAC--------ATAAATGTTTAA-GAACGTAAAACGTAATCAAC-TACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-A-G-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-------AATAAGT-AAAGATGGGGGACGGCAAAAATATGCAGGCTTCAGTTCTAAACTTTTAATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAG-AAAAA-T-GAAGCGAAATCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|30 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGga
gi|4 : TTTTT-T---TTTTCAAAAGGGCGG-GGGTTTC----AACCCC---GCAA-CTGTCCCATTGAA--C----CA-TTTCAAAGATT-CTTT---AT-ATC-TGGATA-------------GCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCTTC--GGTAATTAGTT-T-CTGCTT---GTT-ACTTGTAGAAGAATCCAT---C-AT-GTG--TAGTAATTTAAGCTTTA-TCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGGG--TTA----------CGGGGGTTTGCAACCCCCC---CCCCCCCCTTTGATTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG------TGA-GCT-GGT-TTTTCT-TTCCGGATACATTTTTGGCTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTAGAACCGAAGCCTG-CATATTTTGGCCGACCCCATCTTTACTT-------------ATTCTGTT------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCAT-AAATGCG-CCCC--TATTGGTTGACTTGGGCGTCC-GCTTTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTT--A--A--CA-T--TATG-TAT---GTTGG-TGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG--TTGTTAAACATTTA-G-A-C-CGT-TGGT-T-TG-AATATCAAATGTTCGATT-AA--TTGCAAAGATCGTTGATTGTACATTTTTTCGCTTGTTAAATTACAATTTACATTG----A-TTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|5 : tTCTCTCTCT-TAATTTTTCAAA-G--CGG-GTG---C----AACCCCC--GCAA-CTCCACCACTGAA-----------TTCAA-GATT-CTTTTTTAT-ATA-TGGATACATCGCTGTTTAAGCTATAGCTGTAGATTGTCATA--AAATTCGACTAGAG-AATTATAGTCAGCCTCT-GGTA-TTAGTT-T-CTGCTTT--TTT-ACTTGTAGAA-Ac
gi|5 : tctctcAAATATGCAGGCTTCAGTTCTAAAC--------TTAGTTATCATAGCCATATAGACACAATGTTAACTTCGCCTATTTGTACAAAAAAAATT-GAAACAAAAGTACAC-TTGTATCCGGAAAGAGCAAAACAAGtatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|5 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagGAGGGTTGAAGCT-TGT-TTTGCTCTTCCGGA-ACAATTT-A-CTTTGTGT-TTCAATTTTTT-TGTAC-AAATAGCAAGTAACATTGTGTCTATATGGCTATGATAAC-------TAAGTTTA-----GAA--CTGAAA-------GCC-----------TGCAtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|6 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagaaatatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgaTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACAAAAAGTCATTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAATCAAGAAATCTTAGACAAACATACATAAATTCAAAACCAACATACAT--A---A---ATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAATTTATCGAA--ATTGAGACATGCGCATCAACAG-------AATAAGT-AAAGAT--GGGACGGC-AAAATATGCAGGCTTCAGTTCAAGTTTT---ACGTTCGTT
gi|7 : AT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGC-TCC-GC-TTGTGGTGTCAAAGATGTAAGTTGAT-ACGTTTTACGTTCGTTAAA-----CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACATTTTTTCGCTTGTTAAATTACAA-TTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|8 : GATGAAGTT-CCCGCTTCCGTTTAC--TTCATAAAATGCTCCCCCGGTATTGGTTGAC-TGGGCGTCCGGC-T--------------TGTATGTTGATTACGTTTTACGTTCGTTAAA--A--C-TTCATGTG-TAT---GTT-GTTGTG-AA--TATGTATGTTTGTCT-AGATT--TTGATTTGGTAAACATTAG-G-ACC-CGTCTGGT-T-TGAAATATCCAATGTTCGA-TAAACGTTGCAAAGATCGTTGATTTTACA-TTTTTCGCTTG-TAAATTACAATTTACA-TG----A-TTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATAat
gi|9 : acaAATGCGCCCC---TATTGGTTGACTTGGGCGTCC-GC-TTATGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTT-AA--A--CATT--TATG-TAT---GTTGGTTGTG-AA-TTATGTATGTTTGTCTAAGATTT-TTG-TTTGTTAAACATTTA-G-ACC-CGT-TTGT-T-TG-AATATCAAATGTTCGATTAAA--TTG-AAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTGATTTATTTTGCAACAGTTGTa
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 11111111 222222222 22222222 33333333333 1 11 44444444 111 111111 555555555555 777777777777777777777777777777777777777777777777777777777777777777777777777 111 22222222 3333333 111111 222222222222 11 33333 11 1 1111111111111111 111 1111 8888888888888888888888888888888888888888888888888888888888888888888888888888888 1 333333333 222222 11111 22222 11 1 55555555555555555555555555555555555555555555555555555555555 1 11 11 11111111 11 1 1111
lowQualScore : 3 3 77777 11111111 3 4 8 66 9999 0 000000000 3 66 5 66 5 6 6 6 44444444 8 2 0 0 77777777777 0 2 0 2 8 8 8 88 8 0 33 22222222 88 8 8 3 1 111 1 999999 333333333333 6 6 6 3 6 555555555555555555555555555555555555555555555555555555555555555555555555555 5 000 5 5 22222222 888 5 1111111 5 5 5 444444 5 0 999999999999 33 1 5 1 1 5 5 5 5 99 6 6 22222 8 11 0 66 3 2 1 5 55 4 4 55 8888888888888888 4 222 2222 0 7777777777777777777777777777777777777777777777777777777777777777777777777777777 22 7 8 8 3 44 8 0 0 8 0 8 8 6 8 222222222 333333 3 77777 3 55555 33 0 11111111111111111111111111111111111111111111111111111111111 3 6 8 8 8 0 11 11 0 99 0 5 5 66666666 66 5 888 5 3 0 11 77 4 888 5 5 5 5 5 99 2 3 4444 7 6
lowQualScore : . . ..... ........ . . . .. .... . ......... . .. . .. . . . . ........ . . . . ........... . . . . . . . .. . . .. ........ .. . . . . ... . ...... ............ . . . . . ........................................................................... . ... . . ........ ... . ....... . . . ...... . . ............ .. . . . . . . . . .. . . ..... . .. . .. . . . . .. . . .. ................ . ... .... . ............................................................................... .. . . . . .. . . . . . . . . . ......... ...... . ..... . ..... .. . ........................................................... . . . . . . .. .. . .. . . . ........ .. . ... . . . .. .. . ... . . . . . .. . . .... . .
lowQualScore : 1 1 77777 22222222 3 4 9 11 4444 4 000000000 2 99 0 99 0 7 7 7 22222222 0 5 8 8 44444444444 8 5 0 5 0 0 0 88 8 2 88 44444444 88 0 0 5 7 777 8 222222 333333333333 7 7 7 2 7 000000000000000000000000000000000000000000000000000000000000000000000000000 7 000 7 7 33333333 666 7 0000000 7 7 7 000000 7 7 333333333333 66 4 7 4 4 7 7 7 7 22 7 7 66666 0 00 0 22 2 5 8 0 55 0 0 55 8888888888888888 0 222 4444 7 8888888888888888888888888888888888888888888888888888888888888888888888888888888 66 2 0 0 2 66 0 8 8 0 8 0 0 0 0 000000000 000000 2 55555 2 00000 88 0 88888888888888888888888888888888888888888888888888888888888 3 7 0 0 0 8 00 00 8 22 1 7 7 44444444 99 0 888 0 2 7 44 11 9 666 7 7 7 7 7 22 5 3 2222 3 7
consensus : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--A---ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---CCCCT---TTTGATTTTGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG-CTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
Reference ( family-480 ) : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--A---ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---CCCCT---TTTGATTTTGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG-CTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|1 : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--GTACATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGTCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAG---------------TTATCGAAATATTGAGACATACGCATCAACAG-AATATAAATAAGTAAAAGAT-GGGGACAGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCAAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTCTTTTT-T---TTTTCAAA-GGGCGG-GGATT-C----AACCCCC--GCAA-CTGTCCCATTGAAC-C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTAATA--AAATTCAACTA-A--------AGTCAGCCTCC-GGTA-TTAGTT-T-TTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---TTGAT---TTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGGGGTTGA-GCT-TGTGTTTTCT-TTCCGGATACAATTTTG-C-TT-CGC-TTCA-TTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGT-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTTGTTGTG-AATTTATGTATGTTTGTATAAGATTTCTTA-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGC-A-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|10 : TGGAGGATCTAG--A-GAG--GGG---TTA----------CGGGAGTT-GCAACCCCCCAAACCCCA---TTTGATTTTGTA-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNN-NNTGCT--CT-TTCCGGATACAATTTTC-CTTT-CGT-TTCATTTTTTTCTGTAC-A---------TAAT------
gi|11 : tacaaaagatgcattgcaacacattgaacacatggaaaccCTCCTTCTTTT-T---CTTTTAAA-GGGCGGTGGGTT-TTCTAGACCCAC--GCAA-CTGTCCCATTGAA--TCCGGCA-TTTCAA-GATTCCTTT---ATCATCGTGGATA------------AGCTCTTGCTG-AGATTGTT-TAT-AAATTCAACTATAG-A--TA-AGCCAGCTTCCTGGTA-TTAGTT-TCCTGCTTTGGGTTAACTTGTAGAA-ATTCCATGGTCAATGGTG--TAGTAATTTCAG
gi|12 : ctttctttcttcgtGTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACAAACATAAATTCACAATCAACATACATAAA---ATTAATGTTTAACGAACGTAAAACGTAATCAACATACATCaaaaaaaaagc
gi|13 : GGTCTAAATGTTTAACAAACAAGAAATATTAAAc
gi|13 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-Atnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcatttttgccctttccgccgcccatag
gi|14 : tttaatatttcttgtttgttaaacatttagacctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTGGGCGTCC-GC-TTGTGGTGTCAACGATG--TGTT--TTACGTTTTACGTTT--------A--CGTT--TACGTTAT---G-TGATTACG---TTT---TACGTTCGT-TAAA--------------TAATCATTTACGTATCATGT-TGGT-TGTG-AATg
gi|14 : TATGT-GATTACGTTTTACGTTCGTTAAATAAT-CATT--TACG-TATCATGTTGGTTGTG-AATTTATGTATGTTTGTttatgtatgtttgt
gi|15 : ttgggcgtccgcttgtggtgtcaacgatgtgttttacgttttacgtttacgtttacgtGTATGGGCG-GCGGAAACGGG-----CAA--------AAATT-ACA-A-CTTTTTGCAAA-----TCAATG---------TAAATTGGTTAATTTTAACAAAAGCGAATAAATGTACAATCAACGATCTTTGCAAATTTAAATCGAAACA--------T
gi|16 : GTATGGGCGTGCGGAAC-AGGTGTGTCAATGTAGGATAGATGGACA-A-CTTT--GCAAAACTGCTCATTGACATTGCTCCAAATTG--TAAGTT-AATAA--GCGAA-AAATGa
gi|17 : TCTCTTTTGAT---TTTTCAAA-AGGAGG-GGGT----------------GCAA-C----CCATTGAA--T----CAATTTCAC-GATT-CTTT---AA-ATC-TGGAAA------------AGTTCTTACTGTAGATTGT
gi|18 : ctctcATA--AAATTCAACTATAG-AATTATAGTCAACCTCC-GGTA-TTAGTT-T-CTGCT
gi|19 : ttttaaaatctttnnnnnnnnnnnnnnnnnnnnnnnnntAAATAGA------ATTACATGTA------TGTACTGAAAAAA-T-GAAACGAAAGCAAAA-TTGTATCTGGAGAGCA-AA
gi|2 : tTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACTTT--GCAAAA----TCAATA---------TAAATTA--TAATCT-AACCA--ACGAA-AAAAAGACAATCAACGATCTT--C-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCTACGG-TCTAAAAGTTTAACAAACA-GAAAT-TTAGACAAACATACATAAA--CACAACCAACATACA---------AAATGTTTAACGAACGTAAAACGTAATCAA-ACATATCTTTGACACCACAA-CGGACGCCCAAAGTCAAC-AATCAGGAGGGCG-ATTTCTATGAAGTAAAAGAAGC-GAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT-----CAAGT--AAGAT-GG---CGCA-AAAATATGCAGGCTTC-GTTCTAA--CT---ATATTA-TTATCATACTAAAAGAGA------ATTA------------TGTACAGAAAAAA-TGGAAGCGAAAGCAAAATTTGTATCCGGAAAGAA-AACACAAtaaatccagataaaaaagtt
gi|2 : cCTTTTC-T---TTTGCAAA-GGGCGG-GG--T-C----AACCCCCCTGCAAACTGTCC-ATTGAAACC----CA-TTTCAA-CATT-CTTT---ATGATC-TG-ATA------------A-CTCTTGCTATAGAT-GTCATAGAAAATTCAACTATAGGAATTATAGTCAGCC-CC-GGTA-TTAGTTCT-CT--TCT--GTT-ACTTGTAGAA-AATCCATC-TC-AT-GTGATTA-TAATT-AAGCTTTAATCCTGTATGAAT-CATTGCAGAATCTAG--A-G-G--GGT---TCA----------CGGGG-TT-GCAACCCCCC-----------TGTGATTTTGT-TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGG-TTGA-GCTATGTATTTGCT-TTCCGGATACAATTTTG-CTTT-CGCCTTCATTTTTTTCTGTACCA---------TAAT------TCT-TTTGGCTATGATAACAAACATATAAGTT-A-----GAA--CTG-AA-------GCC-----------TGCATGATTTGCCTCCCCATC----TTTATTATTTGTTGATGCGCGATGTCTCAATTT-GAT-AAGTTCCC-GC-TC--TGTACTTTTCATAAAAATCGCCCCC--TATGGGTT-ACCTTGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACG-TTTACGTTCGTTTAA--ACGCATT--TATG-TAT---GTTGGTTGTGAAATTTATGTATGTTTGTCTAAGATTCGTTG-TTTG-TAAACATTTA---ACC-CG--TGGTGT-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCG-TGATT-TACA-TTTTTCGCTTTTTAAATTACAATTTACATT-----ATTTT-CAA-tgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcttttgcaaagggcggggtcaacccccctgcaaactgtccattgaaacccatttcaacattctttatgatctgataactcttgctatagatgtcatagaaaattcaactataggaattatagtcagccccggtattagttctcttctgttacttgtagaaaatccatctcatgtgattataattaagctttaatcctgtatgaatcattgcagaatctagaggggttcacggggttgcaacccccctgtgattttgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgggggttgagctatgtatttgctttccggatacaattttgctttcgccttcatttttttctgtaccataattcttttggctatgataacaaacatataagttagaactgaagcctgcatgatttgcctccccatctttattatttgttgatgcgcgatgtctcaatttgataagttcccgctctgtacttttcataaaaatcgccccctatgggttaccttggcgtccgcttgtggtgtcaaagatgtatgttgattacgtttacgttcgtttaaacgcatttatgtatgttggttgtgaaatttatgtatgtttgtctaagattcgttgtttgtaaacatttaacccgtggtgttgaatatcaaatgttcgattaaattgcaaagatcgtgatttacatttttcgctttttaaattacaatttacattattttcaa
gi|20 : ctatgggcggcggaaagggcaaaaatgacaaactttgcaaaatcaatataaattataatctaaccaacgaaaaaaagacaatcaacgatcttcaatttaatcgaacatttgatattcaaacctacggtctaaaagtttaacaaacagaaatttagacaaacatacataaacacaaccaacatacaaaatgtttaacgaacgtaaaacgtaatcaaacatatctttgacaccacaacggacgcccaaagtcaacaatcaggagggcgatttctatgaagtaaaagaagcgaacttatcgaaattgagacatgcgcatcaacagaatcaagtaagatggcgcaaaaatatgcaggcttcgttctaactatattattatcatactaaaagagaattatgtacagaaaaaatggaagcgaaagcaaaatttgtatccggaaagaaaacacaatgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGAGTGCATTGGCGGATTTAG--A-G-G--GGG---TT------------GGGGGTT-GCAACACCTC---CCCCT---TTTCTTTTT
gi|21 : gaaaaatagtGTATGGGCG-GCGGAAA-GGG-----CAA--------AA-TG-ACA-A-CTTT--GCAAAA----TCA-TG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAATGtactta
gi|22 : TGTATAATT-CAATGACATATCCAG--A-G-GACGGG---GTAGGGGTGGCCCCAGGAGTT-GTAACCCCCC---CCCCtt
gi|23 : T-CATTGGCG-ATTTAGGGA-G-G--GGGAGGCTG----------TGGGAGTT-GCAACCCCCT---CCCCT---TTT--TTTTTTAcccc
gi|24 : -CAATGGCGGATCTAG--A-G-A--GGAGA-TTA----------CGGGATTC-GCAACCCCCa
gi|25 : tgATGGGCG-GCGGAAA-GGG-----CAA--------AAATG--CATA-CTT-------AA----TCAttt
gi|26 : GTGGATCTAG--ATG-G--GAG---TTA----------TGGGGGTT-GCAACCCCCT---CCtaatatat
gi|27 : aTATGGGCG-GCGGAAA-GGG-----CAA--------AAA
gi|28 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gataacacta
gi|29 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gatgaccc
gi|3 : gggactctTGCGCATCAACCGCGAG---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATTTTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAG-A-AACACAAGCTCAA
gi|3 : TTTTT-T---TTTTCAAA-GGGCGG-GGGTTTC----AACCCCC--GCAA-CTGTCCCAT------------A-TCT--G-GATT-T----------------ATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT---------TG--TA------------TGAATC------------ATTGGCAGATCTAG--A-G-G--GGG---TTA----------CTGGGGTT-GCAACCCCCCA--CCCCC---TTTGATTTTGTAaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|3 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAA-TTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTGAATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGAC-AACATACATAAATTCACAACCAACATAC--------ATAAATGTTTAA-GAACGTAAAACGTAATCAAC-TACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-A-G-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-------AATAAGT-AAAGATGGGGGACGGCAAAAATATGCAGGCTTCAGTTCTAAACTTTTAATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAG-AAAAA-T-GAAGCGAAATCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|30 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGga
gi|4 : TTTTT-T---TTTTCAAAAGGGCGG-GGGTTTC----AACCCC---GCAA-CTGTCCCATTGAA--C----CA-TTTCAAAGATT-CTTT---AT-ATC-TGGATA-------------GCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCTTC--GGTAATTAGTT-T-CTGCTT---GTT-ACTTGTAGAAGAATCCAT---C-AT-GTG--TAGTAATTTAAGCTTTA-TCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGGG--TTA----------CGGGGGTTTGCAACCCCCC---CCCCCCCCTTTGATTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG------TGA-GCT-GGT-TTTTCT-TTCCGGATACATTTTTGGCTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTAGAACCGAAGCCTG-CATATTTTGGCCGACCCCATCTTTACTT-------------ATTCTGTT------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCAT-AAATGCG-CCCC--TATTGGTTGACTTGGGCGTCC-GCTTTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTT--A--A--CA-T--TATG-TAT---GTTGG-TGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG--TTGTTAAACATTTA-G-A-C-CGT-TGGT-T-TG-AATATCAAATGTTCGATT-AA--TTGCAAAGATCGTTGATTGTACATTTTTTCGCTTGTTAAATTACAATTTACATTG----A-TTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|5 : tTCTCTCTCT-TAATTTTTCAAA-G--CGG-GTG---C----AACCCCC--GCAA-CTCCACCACTGAA-----------TTCAA-GATT-CTTTTTTAT-ATA-TGGATACATCGCTGTTTAAGCTATAGCTGTAGATTGTCATA--AAATTCGACTAGAG-AATTATAGTCAGCCTCT-GGTA-TTAGTT-T-CTGCTTT--TTT-ACTTGTAGAA-Ac
gi|5 : tctctcAAATATGCAGGCTTCAGTTCTAAAC--------TTAGTTATCATAGCCATATAGACACAATGTTAACTTCGCCTATTTGTACAAAAAAAATT-GAAACAAAAGTACAC-TTGTATCCGGAAAGAGCAAAACAAGtatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|5 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagGAGGGTTGAAGCT-TGT-TTTGCTCTTCCGGA-ACAATTT-A-CTTTGTGT-TTCAATTTTTT-TGTAC-AAATAGCAAGTAACATTGTGTCTATATGGCTATGATAAC-------TAAGTTTA-----GAA--CTGAAA-------GCC-----------TGCAtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|6 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagaaatatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgaTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACAAAAAGTCATTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAATCAAGAAATCTTAGACAAACATACATAAATTCAAAACCAACATACAT--A---A---ATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAATTTATCGAA--ATTGAGACATGCGCATCAACAG-------AATAAGT-AAAGAT--GGGACGGC-AAAATATGCAGGCTTCAGTTCAAGTTTT---ACGTTCGTT
gi|7 : AT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGC-TCC-GC-TTGTGGTGTCAAAGATGTAAGTTGAT-ACGTTTTACGTTCGTTAAA-----CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACATTTTTTCGCTTGTTAAATTACAA-TTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|8 : GATGAAGTT-CCCGCTTCCGTTTAC--TTCATAAAATGCTCCCCCGGTATTGGTTGAC-TGGGCGTCCGGC-T--------------TGTATGTTGATTACGTTTTACGTTCGTTAAA--A--C-TTCATGTG-TAT---GTT-GTTGTG-AA--TATGTATGTTTGTCT-AGATT--TTGATTTGGTAAACATTAG-G-ACC-CGTCTGGT-T-TGAAATATCCAATGTTCGA-TAAACGTTGCAAAGATCGTTGATTTTACA-TTTTTCGCTTG-TAAATTACAATTTACA-TG----A-TTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATAat
gi|9 : acaAATGCGCCCC---TATTGGTTGACTTGGGCGTCC-GC-TTATGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTT-AA--A--CATT--TATG-TAT---GTTGGTTGTG-AA-TTATGTATGTTTGTCTAAGATTT-TTG-TTTGTTAAACATTTA-G-ACC-CGT-TTGT-T-TG-AATATCAAATGTTCGATTAAA--TTG-AAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTGATTTATTTTGCAACAGTTGTa
blockSeqs : T C TGTGT TGTAGGAT G T A TT CTGC ACATTGCTC A GT T AA T A A A AAAAGTCA A C ATAAAATT G A C C A C TA G . CGAGA A G A A C TTA A CACAAT ACTTCGCCTATT T G T C C A AAT A T TTTTCTA CCT A TCCGG A A C TTTAT G CATCGCTGTTTA GA T G A T T A C C GG A G GGTCA G AT G TC A C A G GG T A AC GTAGGGGTGGCCC T AAA CCCC NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NN N A A G TG C G G C T C AATAGCAAG ATTGTG A AAACA T GAACC GC A GCCTGCATGATTTGCCTCCCCATCTTTATTATTTGTT G C G C C CG TT GG G T AAATAAT CA T CAT A T CG AT T CGT A C G G A CG G T ATTT T C
blockSeqs : . . . . . . . . . . A . . . . . . . . . A ATAA G . C . . . T G . AAT A . . A T . T . CATGTA . . . A . . . . . TTTC C . ACC . . . ATC . . T T . A T . . . . . . . CTC . . G TA A C G . . . . . AGGCTG . A A ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GG G . . A TT . . . . T . . . A TAA T . . . TATTTTGGCCGACCCCATCTTTACTTATTCTGTT . . . . . . . . . . TAAACG . . . . T TC T T G . . . . . . G T . T .
blockSeqs : . . . . . . . . . . A . . . . . . . . . C ATA . . . . . . T . . A A . . A T . A . . . . . A . . . . . TTTC C . T . . . ATG . . . T . A T . . . . . . . C . . . A . . T . . . . . GATTA . . T TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GA . . . . TG . . . . T . . . . . . . . . . . . . . . . . AAAA . . . . T TC T G G . . . . . . T . . T .
blockSeqs : . . . . . . . . . . A . . . . . . . . . C AA . . . T A . . . T T . G . . . . . A . . . . . TC C . C . . . AA . . . T . A T . . . . . . . . . . . . A . . . . . GTTA . . T . . . . . . . . . . A . . . . . . . . . . . AAA . . . . T T T T G . . . . . . G . . . .
blockSeqs : . . . . . . . . . . A . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . AT . . . T . A T . . . . . . . . . . . . . TTA . . C . . . AAA . . . . T . . . G . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . C . . . . . . . . . . G . . . . . . . . . . . . TCA . . . . . AA . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . TTA . . A . . . . .
blockSeqs : . . . . . . . . . . . . . TTA . .
blockSeqs : . . . . . . . . . TT .
blockSeqs : . . . . .
blockSeqs : . . . . .
blockSeqs : . . . .
blockSeqCons : ATA******** T* A******* A* TTTC**** C****** AT**** C**** AAA*****
originalCons : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACAT--A---ATAAATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAG-AAT---AATAAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTT-C----AACCCCC--GCAA-CTGTCCCATTGAA--C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCAT--TC-AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---CCCCT---TTTGATTTTGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG-CTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA--A--CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
finalCons : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CTTT--GCAAAA----TCAATG---------TAAATTG--TAATTT-AACAA--GCGAA-AAATGTACAATCAACGATCTTTGC-AATTT-AATCG-AACA--------TTTG-ATATTCAAACCAACGGGTCTAAATGTTTAACAAACAAGAAATCTTAGACAAACATACATAAATTCACAACCAACATACATA--------AATGTTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGCGGACGCCCAA-GTCAACCAAT-AGG-GGGCGCATTT-TATGAAGT-AAAGAAGCGGAACTTATCGAA--ATTGAGACATGCGCATCAACAGA-------ATAAGTA-AAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTTTC----AACCCCC--GCAA-CTGTCCCATTGAAC------CA-TTTCAA-GATT-CTTTAT----ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCATC----AT-GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---CCCCT---TTTGATTTTGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG-CTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGAT-AAGTT-CC-GCTTC--TTTAC--TTCATAAAATGCGCCCCC--TATTGGTTGACTTGGGCGTCC-GC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCGTTAAA-----CATT--TATG-TAT---GTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTTGTTAAACATTTA-G-ACC-CGT-TGGT-T-TG-AATATCAAATGTTCGATTAAA--TTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTG----ATTTTGCAA-AGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111111 11111111 111111 11111 11 1111 222222 111 111111 555555555555 777777777777777777777777777777777777777777777777777777777777777777777777777 111 1111111 3333333 111111 222222222222 11 2222222222 11 1111111111111111 111 1111 8888888888888888888888888888888888888888888888888888888888888888888888888888888 1 333333333 222222 11111 22222 11 1 55555555555555555555555555555555555555555555555555555555555 1 1 11 1 1 222222 1 1 1
lowQualScore : 2 2 66666 99999999 2 3 6 3 44 7777 7777 2 444444444 55 3 55 3 3 4 66 4 4 66666666 5 4 4 4 4 4 4 4 2 0 777 111111 4 55555 8888 5 5 5 66 5 5 5 77 99 6 33 7777 333333 8 88 8 8 3 1 111 1 999999 333333333333 6 6 6 3 6 555555555555555555555555555555555555555555555555555555555555555555555555555 5 000 5 5 7777777 888 5 1111111 5 5 5 444444 5 0 999999999999 33 1 5 1 1 5 5 5 5 99 6 6 8 5555555555 11 5 66 9 5 55 4 4 55 8888888888888888 4 222 2222 0 7777777777777777777777777777777777777777777777777777777777777777777777777777777 22 7 8 8 3 44 8 0 0 8 0 8 8 6 8 222222222 333333 3 77777 3 55555 33 0 11111111111111111111111111111111111111111111111111111111111 3 6 3 7 88 7 6 6 3 7 3 111111 7 7 3 7 7 6 6 7 3 7 7 6 3 6 7 6 7
lowQualScore : . . ..... ........ . . . . .. .... .... . ......... .. . .. . . . .. . . ........ . . . . . . . . . . ... ...... . ..... .... . . . .. . . . .. .. . .. .... ...... . .. . . . . ... . ...... ............ . . . . . ........................................................................... . ... . . ....... ... . ....... . . . ...... . . ............ .. . . . . . . . . .. . . . .......... .. . .. . . .. . . .. ................ . ... .... . ............................................................................... .. . . . . .. . . . . . . . . . ......... ...... . ..... . ..... .. . ........................................................... . . . . .. . . . . . . ...... . . . . . . . . . . . . . . . . .
lowQualScore : 7 7 77777 77777777 7 3 7 3 66 1111 1111 3 555555555 00 6 00 6 6 4 11 4 4 11111111 0 4 4 4 0 0 0 0 5 8 000 555555 0 55555 5555 0 0 0 99 0 7 7 99 22 7 88 0000 000000 0 88 0 0 5 7 777 8 222222 333333333333 7 7 7 2 7 000000000000000000000000000000000000000000000000000000000000000000000000000 7 000 7 7 0000000 666 7 0000000 7 7 7 000000 7 7 333333333333 66 4 7 4 4 7 7 7 7 22 7 7 0 8888888888 00 0 22 2 0 55 0 0 55 8888888888888888 0 222 4444 7 8888888888888888888888888888888888888888888888888888888888888888888888888888888 66 2 0 0 2 66 0 8 8 0 8 0 0 0 0 000000000 000000 2 55555 2 00000 88 0 88888888888888888888888888888888888888888888888888888888888 3 7 3 3 33 3 7 7 3 3 3 000000 3 3 3 3 3 7 7 3 3 3 3 7 3 7 3 7 3
consensus : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CT-TT--GCAAAA----T----CAATG---------TAAATTG--TAATTT-AACAA--GCG-AA-AAATGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CA-AACCA-ACG-GGT-C-TAAATGTTTAACAAA-CAAGAAATCTTAGACAAACATACATAAATTCACAACCAAC---A------TA-CATA-----AATG----TTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGC-GGACGCCCAA-GTCAACCAAT-A--GG-GGGCGCATTT-TATGAAGT-AAA--GAAGC-GGAACTT-ATCGAA--ATTGAGACATGCGCATCAAC----AG------AAT-AAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTTTC---AACCCCC--GCAA-CTGTCCCATTGAA--C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCA-TC--AT-----GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---CCCCT---TTTGATTTTGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG-CTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGATAAGTT-CCGCTTCTTTAC--TTCATAAAATGCGCCCCCTATTGGTTGACTTGGGCGTCCGC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCG-TT-AAA--CATTTATGTATGTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTGTTTGTTAAACATTTAGACCCGTTGGT-TTGAATATCAAATGTTCGATTAAATTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTGATTTTGCAAAGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
Reference ( family-480 ) : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CT-TT--GCAAAA----T----CAATG---------TAAATTG--TAATTT-AACAA--GCG-AA-AAATGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CA-AACCA-ACG-GGT-C-TAAATGTTTAACAAA-CAAGAAATCTTAGACAAACATACATAAATTCACAACCAAC---A------TA-CATA-----AATG----TTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGC-GGACGCCCAA-GTCAACCAAT-A--GG-GGGCGCATTT-TATGAAGT-AAA--GAAGC-GGAACTT-ATCGAA--ATTGAGACATGCGCATCAAC----AG------AAT-AAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTCTTTTT-T---TTTTCAAA-GGGCGG-GGGTTTC---AACCCCC--GCAA-CTGTCCCATTGAA--C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCA-TC--AT-----GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCGGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---CCCCT---TTTGATTTTGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGGGTTGA-GCT-TGTGTTTNCT-TTCCGGATACAATTTTG-CTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGC-ATGTCTCAATTTCGATAAGTT-CCGCTTCTTTAC--TTCATAAAATGCGCCCCCTATTGGTTGACTTGGGCGTCCGC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCG-TT-AAA--CATTTATGTATGTTGGTTGTG-AATTTATGTATGTTTGTCTAAGATTTCTTGTTTGTTAAACATTTAGACCCGTTGGT-TTGAATATCAAATGTTCGATTAAATTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTGATTTTGCAAAGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|1 : GTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACT-TT--GCAAAA----T----CAATG---------TAAATTG--TAATTT-AACAA--GCG-AA-AAATGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CA-AACCA-ACG-GGT-C-TAAATGTTTAACAAA-CAAGAAATCTTAGACAAACATACATAAATTCACAACCAAC---ATACATGTA-CATA-----AATG----TTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGC-GGACGTCCAA-GTCAACCAAT-A--GG-GGGCGCATTT-TATGAAG------------------TT-ATCGAAATATTGAGACATACGCATCAAC----AGAATATAAAT-AAGTAAAAGAT-GGGGACAGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCAAAAGCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTCTTTTT-T---TTTTCAAA-GGGCGG-GGA-TTC---AACCCCC--GCAA-CTGTCCCATTGAAC-C----CA-TTTCAA-GATT-CTTT---AT-ATC-TGGATA------------AGCTCTTGCTGTAGATTGTAATA--AAATTCAACTA-A--------AGTCAGCCTCC-GGTA-TTAGTT-T-TTGCTTT--GTT-ACTTGTAGAA-AATCCATTC--AT-----GTG--TAGTAATTTAAGCTTTAATCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGG---TTA----------CGGGGGTT-GCAACCCCCC---TTGAT---TTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGGGGTTGA-GCT-TGTGTTTTCT-TTCCGGATACAATTTTG-C-TT-CGC-TTCA-TTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTA-----GAA--CTG-AA-------GCC-----------TGCAT-------------ATC----T------------GATGCGT-ATGTCTCAATTTCGATAAGTT-CCGCTTCTTTAC--TTCATAAAATGCGCCCCCTATTGGTTGACTTGGGCGTCCGC-TTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCG-TTAAAA--CATTTATGTATGTTTGTTGTG-AATTTATGTATGTTTGTATAAGATTTCTTATTTGTTAAACATTTAGACCCGTTGGT-TTGAATATCAAATGTTCGATTAAATTGCAAAGATCGTTGATTGTACA-TTTTTCGCTTGTTAAATTACAATTTACATTGATTTTGC-AAGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|10 : TGGAGGATCTAG--A-GAG--GGG---TTA----------CGGGAGTT-GCAACCCCCCAAACCCCA---TTTGATTTTGTA-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNN-NNTGCT--CT-TTCCGGATACAATTTTC-CTTT-CGT-TTCATTTTTTTCTGTAC-A---------TAAT------
gi|11 : tacaaaagatgcattgcaacacattgaacacatggaaaccCTCCTTCTTTT-T---CTTTTAAA-GGGCGGTGGGTTTTCTAGACCCAC--GCAA-CTGTCCCATTGAA--TCCGGCA-TTTCAA-GATTCCTTT---ATCATCGTGGATA------------AGCTCTTGCTG-AGATTGTT-TAT-AAATTCAACTATAG-A--TA-AGCCAGCTTCCTGGTA-TTAGTT-TCCTGCTTTGGGTTAACTTGTAGAA-ATTCCA-TG--GTCAATGGTG--TAGTAATTTCAG
gi|12 : ctttctttcttcgtGTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CT-TT--GCAAAA----T----CAATG---------TAAATTG--TAATTT-AACAA--GCG-AA-AAATGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CA-AACCA-ACG-GGT-C-TAAATGTTTAACAAA-CAAGAAATCTTAGACAAACAAACATAAATTCACAATCAAC---A------TA-CATAAAATTAATG----TTTAACGAACGTAAAACGTAATCAACATACATCaaaaaaaaagc
gi|13 : -GGT-C-TAAATGTTTAACAAA-CAAGAAATATTAAAc
gi|13 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-Atnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcatttttgccctttccgccgcccatag
gi|14 : tttaatatttcttgtttgttaaacatttagacctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATT-CACAACCA-ACATGATACGTAAATGATTA--------------TTTA-ACGAACGTA---AAA--CGTAATCA-C---A------TAACGTA-----AACG----T-----AAACGTAAAACGTAA--AACA--CATCGTTGACACCACAAGC-GGACGCCCAA-g
gi|14 : ACAAACATACATAAATTCACAACCAACATGA------TA-CGTA-----AATGATTATTTAACGAACGTAAAACGTAATC-ACATAttatgtatgtttgt
gi|15 : ttgggcgtccgcttgtggtgtcaacgatgtgttttacgttttacgtttacgtttacgtGTATGGGCG-GCGGAAACGGG-----CAA--------AAATT-ACA-A-CT-TTTTGCAAA-----T----CAATG---------TAAATTGGTTAATTTTAACAAAAGCG-AATAAATGTACAATCAACGATCTTTGCAAA--TTTAAATCGAAACA--------T
gi|16 : GTATGGGCGTGCGGAAC-AGGTGTGTCAATGTAGGATAGATGGACA-A-CT-TT--GCAAAACTGCT----CATTGACATTGCTCCAAATTG--TAAGTT-AATAA--GCG-AA-AAATGa
gi|17 : TCTCTTTTGAT---TTTTCAAA-AGGAGG-GGGT---------------GCAA-C----CCATTGAA--T----CAATTTCAC-GATT-CTTT---AA-ATC-TGGAAA------------AGTTCTTACTGTAGATTGT
gi|18 : ctctcATA--AAATTCAACTATAG-AATTATAGTCAACCTCC-GGTA-TTAGTT-T-CTGCT
gi|19 : ttttaaaatctttnnnnnnnnnnnnnnnnnnnnnnnnntAAATAGA------ATTACATGTA------TGTACTGAAAAAA-T-GAAACGAAAGCAAAA-TTGTATCTGGAGAGCA-AA
gi|2 : tTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-AACT-TT--GCAAAA----T----CAATA---------TAAATTA--TAATCT-AACCA--ACG-AA-AAAAAGACAATCAACGATCTT--C-AA--TTT-AATCG-AACA--------TTTGA-TATT-CA-AACCT-ACG-G-T-C-TAAAAGTTTAACAAA-CA-GAAAT-TTAGACAAACATACATAAA--CACAACCAAC---A------TA-CA-A-----AATG----TTTAACGAACGTAAAACGTAATCAA-ACATATCTTTGACACCACAA-C-GGACGCCCAAAGTCAAC-AATCA--GGAGGGCG-ATTTCTATGAAGTAAAA--GAAGC--GAACTT-ATCGAA--ATTGAGACATGCGCATCAAC----AG------AATCAAGT--AAGAT-GG---CGCA-AAAATATGCAGGCTTC-GTTCTAA--CT---ATATTA-TTATCATACTAAAAGAGA------ATTA------------TGTACAGAAAAAA-TGGAAGCGAAAGCAAAATTTGTATCCGGAAAGAA-AACACAAtaaatccagataaaaaagtt
gi|2 : cCTTTTC-T---TTTGCAAA-GGGCGG-GG---TC---AACCCCCCTGCAAACTGTCC-ATTGAAACC----CA-TTTCAA-CATT-CTTT---ATGATC-TG-ATA------------A-CTCTTGCTATAGAT-GTCATAGAAAATTCAACTATAGGAATTATAGTCAGCC-CC-GGTA-TTAGTTCT-CT--TCT--GTT-ACTTGTAGAA-AATCCA-TCTCAT-----GTGATTA-TAATT-AAGCTTTAATCCTGTATGAAT-CATTGCAGAATCTAG--A-G-G--GGT---TCA----------CGGGG-TT-GCAACCCCCC-----------TGTGATTTTGT-TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGGGG-TTGA-GCTATGTATTTGCT-TTCCGGATACAATTTTG-CTTT-CGCCTTCATTTTTTTCTGTACCA---------TAAT------TCT-TTTGGCTATGATAACAAACATATAAGTT-A-----GAA--CTG-AA-------GCC-----------TGCATGATTTGCCTCCCCATC----TTTATTATTTGTTGATGCGCGATGTCTCAATTT-GATAAGTTCCCGC-TCTGTACTTTTCATAAAAATCGCCCCCTATGGGTT-ACCTTGGCGTCCGC-TTGTGGTGTCAAAGATGTATGTTGATTACG-TTTACGTTCGTTT-AAACGCATTTATGTATGTTGGTTGTGAAATTTATGTATGTTTGTCTAAGATTCGTTGTTTG-TAAACATTTA-ACCCG-TGGTGTTGAATATCAAATGTTCGATTAAATTGCAAAGATCG-TGATT-TACA-TTTTTCGCTTTTTAAATTACAATTTACATT-ATTTT-CAtgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttttcttttgcaaagggcggggtcaacccccctgcaaactgtccattgaaacccatttcaacattctttatgatctgataactcttgctatagatgtcatagaaaattcaactataggaattatagtcagccccggtattagttctcttctgttacttgtagaaaatccatctcatgtgattataattaagctttaatcctgtatgaatcattgcagaatctagaggggttcacggggttgcaacccccctgtgattttgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgggggttgagctatgtatttgctttccggatacaattttgctttcgccttcatttttttctgtaccataattcttttggctatgataacaaacatataagttagaactgaagcctgcatgatttgcctccccatctttattatttgttgatgcgcgatgtctcaatttgataagttcccgctctgtacttttcataaaaatcgccccctatgggttaccttggcgtccgcttgtggtgtcaaagatgtatgttgattacgtttacgttcgtttaaacgcatttatgtatgttggttgtgaaatttatgtatgtttgtctaagattcgttgtttgtaaacatttaacccgtggtgttgaatatcaaatgttcgattaaattgcaaagatcgtgatttacatttttcgctttttaaattacaatttacattattttcaa
gi|20 : ctatgggcggcggaaagggcaaaaatgacaaactttgcaaaatcaatataaattataatctaaccaacgaaaaaaagacaatcaacgatcttcaatttaatcgaacatttgatattcaaacctacggtctaaaagtttaacaaacagaaatttagacaaacatacataaacacaaccaacatacaaaatgtttaacgaacgtaaaacgtaatcaaacatatctttgacaccacaacggacgcccaaagtcaacaatcaggagggcgatttctatgaagtaaaagaagcgaacttatcgaaattgagacatgcgcatcaacagaatcaagtaagatggcgcaaaaatatgcaggcttcgttctaactatattattatcatactaaaagagaattatgtacagaaaaaatggaagcgaaagcaaaatttgtatccggaaagaaaacacaatgtcacccccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGAGTGCATTGGCGGATTTAG--A-G-G--GGG---TT------------GGGGGTT-GCAACACCTC---CCCCT---TTTCTTTTT
gi|21 : gaaaaatagtGTATGGGCG-GCGGAAA-GGG-----CAA--------AA-TG-ACA-A-CT-TT--GCAAAA----T----CA-TG---------TAA-TTG--TAATTT-AACAA--GCG-AA-AAATGtactta
gi|22 : TGTATAATT-CAATGACATATCCAG--A-G-GACGGG---GTAGGGGTGGCCCCAGGAGTT-GTAACCCCCC---CCCCtt
gi|23 : T-CATTGGCG-ATTTAGGGA-G-G--GGGAGGCTG----------TGGGAGTT-GCAACCCCCT---CCCCT---TTT--TTTTTTAcccc
gi|24 : -CAATGGCGGATCTAG--A-G-A--GGAGA-TTA----------CGGGATTC-GCAACCCCCa
gi|25 : tgATGGGCG-GCGGAAA-GGG-----CAA--------AAATG--CATA-CT-T-------AA----T----CAttt
gi|26 : GTGGATCTAG--ATG-G--GAG---TTA----------TGGGGGTT-GCAACCCCCT---CCtaatatat
gi|27 : aTATGGGCG-GCGGAAA-GGG-----CAA--------AAA
gi|28 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gataacacta
gi|29 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-gatgaccc
gi|3 : gggactctTGCGCATCAACCGCGAG------AAT-AAGT-AAAGAT-GGGGACGGC-AAAATATGCAGGCTTCAGTTCTAAACTT---ATTTTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAGAAAAAA-T-GAAGCGAAAGCAAAA-TTGTATCCGGAAAG-A-AACACAAGCTCAA
gi|3 : TTTTT-T---TTTTCAAA-GGGCGG-GGGTTTC---AACCCCC--GCAA-CTGTCCCAT------------A-TCT--G-GATT-T----------------ATA------------AGCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCCTCC-GGTA-TTAGTT-T-CTGCTTT--GTT-ACTTGTAGAA-AATCCA-T----T-----GT---------------------------ATGAAT-CATTGGCAGATCTAG--A-G-G--GGG---TTA----------CTGGGGTT-GCAACCCCCCA--CCCCC---TTTGATTTTGTAaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|3 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CT-TT--GCAAAA----T----CAATG---------TAA-TTG--TAATTT-AACAA--GCG-AA-AAATGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGAATATT-CA-AACCA-ACG-GGT-C-TAAATGTTTAACAAA-CAAGAAATCTTAGACAA-CATACATAAATTCACAACCAAC---A------TA-CATA-----AATG----TTTAA-GAACGTAAAACGTAATCAAC-TACATCTTTGACACCACAAGC-GGACGCCCAA-GTCAACCAAT-A--GG-GG-CGCATTT-TATGAAGT-AAA--GAAGC-GGAACTT-ATCGAA--ATTGAGACATGCGCATCAAC----AG------AAT-AAGT-AAAGATGGGGGACGGCAAAAATATGCAGGCTTCAGTTCTAAACTTTTAATATTAGTTATCATAGCCAAATAGA------ATTA------------TGTACAG-AAAAA-T-GAAGCGAAATCAAAA-TTGTATCCGGAAAGAA-AACACAAGCTCAAannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgagcttgtgttttctttccggatacaattttgatttcgcttcatttttctgtacataattctatttggctatgataactaatattaaaagtttagaactgaagcctgcatatttttgccgtcccccatctttacttattctgttgatgcgcatgtctcaatttcgataagttccgcttctttacttcataaaatgcgcccctattggttgacttgggcgtccgcttgtggtgtcaaagatgtagttgattacgttttacgttcttaaacatttatgtatgttggttgtgaatttatgtatgttgtctaagatttcttgtttgttaaacatttagacccgttggtttgaatattcaaatgttcgattaaattgcaaagatcgttgattgtacatttttcgcttgttaaattacaattacattgattttgcaaagttgtcatttttgccctttccgccgcccataga
gi|30 : tgcgcatcaaccgcgagaataagtaaagatggggacggcaaaatatgcaggcttcagttctaaacttattttagttatcatagccaaatagaattatgtacagaaaaaatgaagcgaaagcaaaattgtatccggaaagaaacacaagctcaaaccccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttttttttttcaaagggcgggggtttcaacccccgcaactgtcccatatctggatttataagctcttgctgtagattgtcataaaattcaactatagaattatagtcagcctccggtattagtttctgctttgttacttgtagaaaatccattgtatgaatcattggcagatctagagggggttactggggttgcaaccccccaccccctttgattttgtaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngAT-A--GG-GGGCGCATTT-TATGAAGT-AAA--GAAGga
gi|4 : TTTTT-T---TTTTCAAAAGGGCGG-GGGTTTC---AACCCC---GCAA-CTGTCCCATTGAA--C----CA-TTTCAAAGATT-CTTT---AT-ATC-TGGATA-------------GCTCTTGCTGTAGATTGTCATA--AAATTCAACTATAG-AATTATAGTCAGCTTC--GGTAATTAGTT-T-CTGCTT---GTT-ACTTGTAGAAGAATCCA-TC--AT-----GTG--TAGTAATTTAAGCTTTA-TCCTGTATGAAT-CATTGGCAGATCTAG--A-G-G--GGGG--TTA----------CGGGGGTTTGCAACCCCCC---CCCCCCCCTTTGATTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG------TGA-GCT-GGT-TTTTCT-TTCCGGATACATTTTTGGCTTT-CGC-TTCATTTTTTTCTGTAC-A---------TAAT------TCTATTTGGCTATGATAACTAA--TATAAGTTTAGAACCGAAGCCTG-CATATTTTGGCCGACCCCATCTTTACTT-------------ATTCTGTT------------GATGCGC-ATGTCTCAATTTCGATAAGTT-CCGCTTCTTTAC--TTCAT-AAATGCG-CCCCTATTGGTTGACTTGGGCGTCCGCTTTGTGGTGTCAAAGATGTATGTTGATTACGTTTTACGTTCG-TT--AA--CA-TTATGTATGTTGG-TGTG-AATTTATGTATGTTTGTCTAAGATTTCTTG-TTGTTAAACATTTAGA-CCGTTGGT-TTGAATATCAAATGTTCGATT-AATTGCAAAGATCGTTGATTGTACATTTTTTCGCTTGTTAAATTACAATTTACATTGA-TTTGCAAAGTTGTCATTTTTGCCCTTTCCGCCGCCCATA
gi|5 : tTCTCTCTCT-TAATTTTTCAAA-G--CGG-GTG---C---AACCCCC--GCAA-CTCCACCACTGAA-----------TTCAA-GATT-CTTTTTTAT-ATA-TGGATACATCGCTGTTTAAGCTATAGCTGTAGATTGTCATA--AAATTCGACTAGAG-AATTATAGTCAGCCTCT-GGTA-TTAGTT-T-CTGCTTT--TTT-ACTTGTAGAA-Ac
gi|5 : tctctcAAATATGCAGGCTTCAGTTCTAAAC--------TTAGTTATCATAGCCATATAGACACAATGTTAACTTCGCCTATTTGTACAAAAAAAATT-GAAACAAAAGTACAC-TTGTATCCGGAAAGAGCAAAACAAGtatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|5 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagGAGGGTTGAAGCT-TGT-TTTGCTCTTCCGGA-ACAATTT-A-CTTTGTGT-TTCAATTTTTT-TGTAC-AAATAGCAAGTAACATTGTGTCTATATGGCTATGATAAC-------TAAGTTTA-----GAA--CTGAAA-------GCC-----------TGCAtaaaggagggagaagagagagagagatgagagagagatgagagggttgaagcttgttttgctcttccggaacaatttactttgtgtttcaatttttttgtacaaatagcaagtaacattgtgtctatatggctatgataactaagtttagaactgaaagcctgca
gi|6 : tctctctctctctcttaatttttcaaagcgggtgcaacccccgcaactccaccactgaattcaagattcttttttatatatggatacatcgctgtttaagctatagctgtagattgtcataaaattcgactagagaattatagtcagcctctggtattagtttctgcttttttacttgtagaaatatgcaggcttcagttctaaacttagttatcatagccatatagacacaatgttaacttcgcctatttgtacaaaaaaaattgaaacaaaagtacacttgtatccggaaagagcaaaacaagtaaaggagggagaagagagagagagatgagagagagatgaTATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CT-TT--GCAAAA----T----CAATG---------TAAATTG--TAATTT-AACAA--GCG-AA-AAATGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACAAAAAGTCATTTGA-TATT-CA-AACCA-ACG-GGT-C-TAAATGTTTAACAAT-CAAGAAATCTTAGACAAACATACATAAATTCAAAACCAAC---A------TA-CATA-----AATG----TTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCACAAGC-GGACGCCCAA-GTCAACCAAT-A--GG-GGGCGCATTT-TATGAAGT-AAA--GAAGC-GGAATTT-ATCGAA--ATTGAGACATGCGCATCAAC----AG------AAT-AAGT-AAAGAT--GGGACGGC-AAAATATGCAGGCTTCAGTTCAAGTTTT---ACGTTCGTT
gi|7 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CT-TT--GCAAAA----T----CAATG---------T-AATTG--TAATTT-AACAA--GCGAAA-AAATGTACAATCAACGATCTTTGC-AA--TTT-AATCG-AACA--------TTTGA-TATT-CA-AACCA-ACG-GGT-C-TAAATGTTTAACAAA-CAAGAAATCTTAGACAAACATACATAAATTCACAACCAAC---A------TA-CATA-----AATG----TTTAACGAACGTAAAACGT-ATCAACTTACATCTTTGACACCACAAGC-GGA-GCCCAA-GTCAACCAAT-A--GG-GGGCGCATTT-TATGAAGT-AAA--GAAGC-GGAACTT-AT
gi|8 : TATGGGCG-GCGGAAA-GGG-----CAA--------AAATG-ACA-A-CT-TT--GCAAA-----T----CA-TG---------TAAATTG--TAATTT-A-CAA--GCG-AA-AAATGTAAAATCAACGATCTTTGC-AACGTTT-A-TCG-AACA--------TTGGA-TATTTCA-AACCAGACG-GGT-C-CTAATGTTTACCAAATCAA--AATCT-AGACAAACATACATA--TTCACAAC-AAC---A------TA-CACATG---AAGT----TTTAACGAACGTAAAACGTAATCAACATACA--------------AGCCGGACGCCCA--GTCAACCAAT-ACCGG-GGGAGCATTT-TATGAAGT-AAACGGAAGCGGGAACTTCATCat
gi|9 : aca-ACA-A-CTGTT--GCAAAA----TAAATCAATG---------TAAATTG--TAATTT-AACAA--GCG-AA-AAATGTACAATCAACGATCTTT-C-AA--TTT-AATCG-AACA--------TTTGA-TATT-CA-AACAA-ACG-GGT-C-TAAATGTTTAACAAA-CAA-AAATCTTAGACAAACATACATAA-TTCACAACCAAC---A------TA-CATA-----AATG----TTTAACGAACGTAAAACGTAATCAACATACATCTTTGACACCATAAGC-GGACGCCCAA-GTCAACCAAT-A---G-GGGCGCATTa