lowQualScore : 1111111111111111111111111111111 1111111111111111111111111111111 1111111 22222222222222222222222 11111111111111111111111111 1111111111111 111111111111 11111111111111111111111111 11111111111111111111111111111111111111111 11111111111111111111111 11111111111 2222222222222222 1111111111111111111
lowQualScore : 555 22 2222 5555555555555555 3 22 222222222 111 555555555 222222222 1 4444444444 1111 222222 1 1 11 1 66666666666666666 11 3333333 11 1 1 111 1 1 1 2 1 2 2222222222 444 11 2 2 6666666666 222 4 444444 1 4 7777777777777777 22 1 22 4 22 22 66666666666666 3333 3333333333333333333333333333333 11 1 1 1 1 1 111 111 1 4 22 1 2222 2222 111 1 1 2 2222 1 111 11 1 22222 1 1 3333333333333333333333333333333 2 1111111 3333333333 11 1 1 1 1 11111 1 1 1 1 11 8888888888888 11 1 11 33333333 55555555555555 11 1 22222222 66666 2 2 33 333 555 33 1 222 4 00000000000000000000000 2 222222 1 555555 1 2 2 22 55555555555 2 1 111 111 1 11111111111111111111111111 1 1 11 1 777777777777777 1 1 4 2 77777777 333 1 3333333333333 44444444 1 222 11 4444 1 99999999999999 1 2 333333333333 2 2 2 1 2 5555 3333333 22 1 1 1 1 4444444444 1 66666 2 1 3 1 11 222 44 222 11 8888 1 11 1 33 1 1 1 33 1 1 444444444444 1 11 2 1111 1 1 88888888888888888888888888 1 1 2222 222 1 777777777777777777 1 11111111111111111111111111111111111111111 1 33333333333333333333333 1 1111 7777777777 2 1 1 1 11 11 2222222 1 1 33333333333 22222 5555555555555555 1 1 333 1 2222 1111 111 2222222 1111 1 11 2222222222222222222 111
lowQualScore : 6 6 888 77 0000 3333333333333333 3 2 99 8 6 8 222222222 8 8 444 444444444 000000000 2 5 2 2222222222 8888 2 3 111111 44 3 0 0 2 33 2 5 77777777777777777 55 2222222 33 3 3 666 3 3 5 6 0 5 0 3 1111111111 333 88 0 0 8888888888 999 0 6 333333 5 0 2 5555555555555555 77 5 2 33 0 77 77 66666666666666 4 6 4 7777 7777777777777777777777777777777 88 6 3 3 6 3 3 3 666 666 3 0 22 7 3 7777 1111 7 999 3 6 3 6 6 7 4444 6 9 3 777 88 3 66666 3 3 8888888888888888888888888888888 3 0 2 4 5555555 2222222222 55 7 5 0 2 0 0 33333 7 0 3 7 3 3 3 88 6666666666666 88 5 33 2 3 88888888 88888888888888 2 33 0 6 55555555 00000 6 0 0 11 3 111 555 00 5 666 0 99999999999999999999999 6 0 2 777777 5 88 666666 5 0 7 77 22222222222 6 3 222 88 999 3 77777777777777777777777777 0 5 6 33 0 2 333333333333333 6 0 3 5 0 1 7 0 22222222 555 5 0000000000000 3 33333333 5 111 2 6 88 2222 1 3 66666666666666 5 0 2 000000000000 0 4 0 3 0 5 0 6666 3333333 7 33 0 3 0 5 2 0 2 3333333333 0 3 2 11111 0 6 0 0 0 33 999 3 00 777 99 1 0000 3 88 7 7 3 00 0 3 3 3 888 00 7 3 0 000000000000 5 33 0 4 4444 5 0 99999999999999999999999999 0 5 6 6 3333 1 777 7 3 555555555555555555 7 3 44444444444444444444444444444444444444444 6 7 00000000000000000000000 3 7 4444 5555555555 4 0 0 3 0 0 2 33 1 22 8888888 3 0 0 33333333333 6 33333 6 7777777777777777 3 3 7 7 222 0 66 1111 7777 3 3 6 6 222 1111111 88 3333 6 0 6 2 33 77 1 1111111111111111111 77 5 9 5 7 8 6 111 6 1 3 3
lowQualScore : . . ... .. .... ................ . . .. . . . ......... . . ... ......... ......... . . . .......... .... . . ...... .. . . . . .. . . ................. .. ....... .. . . ... . . . . . . . . .......... ... .. . . .......... ... . . ...... . . . ................ .. . . .. . .. .. .............. . . . .... ............................... .. . . . . . . . ... ... . . .. . . .... .... . ... . . . . . . .... . . . ... .. . ..... . . ............................... . . . . ....... .......... .. . . . . . . ..... . . . . . . . .. ............. .. . .. . . ........ .............. . .. . . ........ ..... . . . .. . ... ... .. . ... . ....................... . . . ...... . .. ...... . . . .. ........... . . ... .. ... . .......................... . . . .. . . ............... . . . . . . . . ........ ... . ............. . ........ . ... . . .. .... . . .............. . . . ............ . . . . . . . .... ....... . .. . . . . . . . .......... . . . ..... . . . . . .. ... . .. ... .. . .... . .. . . . .. . . . . ... .. . . . ............ . .. . . .... . . .......................... . . . . .... . ... . . .................. . . ......................................... . . ....................... . . .... .......... . . . . . . . .. . .. ....... . . . ........... . ..... . ................ . . . . ... . .. .... .... . . . . ... ....... .. .... . . . . .. .. . ................... .. . . . . . . ... . . . .
lowQualScore : 0 5 888 55 8888 5555555555555555 2 0 66 0 0 0 888888888 0 0 000 666666666 666666666 5 0 2 0000000000 0000 5 2 555555 55 2 0 0 5 88 5 0 22222222222222222 00 5555555 22 3 3 777 3 3 0 0 0 5 0 0 5555555555 000 00 0 0 5555555555 000 0 0 000000 0 0 5 5555555555555555 55 5 5 00 0 55 55 55555555555555 0 0 0 5555 0000000000000000000000000000000 33 7 3 3 7 3 3 3 777 777 3 0 00 0 3 0000 7777 3 000 3 7 3 7 7 3 0000 7 0 3 000 33 3 77777 3 3 0000000000000000000000000000000 0 0 5 0 0000000 7777777777 77 3 0 0 5 0 0 22222 3 7 3 3 3 3 3 33 7777777777777 00 0 88 5 2 00000000 88888888888888 5 22 0 7 00000000 55555 0 0 0 55 0 000 000 55 0 000 0 00000000000000000000000 0 0 5 555555 5 00 000000 0 0 5 55 00000000000 7 3 333 00 333 3 00000000000000000000000000 7 0 2 88 0 5 000000000000000 0 7 3 0 0 0 3 0 55555555 000 0 0000000000000 0 00000000 0 000 5 0 00 5555 5 0 55555555555555 0 0 5 000000000000 0 0 0 0 0 5 0 5555 3333333 3 88 0 2 0 5 5 0 5 8888888888 0 2 5 00000 0 0 0 0 0 88 222 2 22 777 33 0 0000 3 33 3 3 3 33 7 3 3 3 000 00 3 3 0 888888888888 0 88 0 0 8888 5 0 55555555555555555555555555 0 0 0 0 8888 0 333 3 3 333333333333333333 3 3 33333333333333333333333333333333333333333 0 0 88888888888888888888888 3 3 3333 0000000000 0 8 0 0 0 0 2 88 2 22 8888888 2 0 0 33333333333 7 00000 0 5555555555555555 3 3 3 3 888 0 55 2222 0000 2 5 7 7 000 7777777 88 7777 7 7 7 5 33 22 0 6666666666666666666 99 7 9 7 6 4 7 777 7 7 2 7
consensus : GTAAAGAAATACTTGTATACATCATAAAGCCCC-ACCATTAGGGGAAAATGATTGCATC---TCGAGACATAATAGAA-----TATCTCTGCCAGAAGTATATGCAATATA-AGTTTTTT-CATTATGCT-----AT--GAGAACATG-TCCAAATATGAATTATCTT-G--CAATAGTATTT-GTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AAC-TTTTTTTTTC-TGAAATTGTTATTCTGAT----TTTCAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACAT---------T-------ATTGG-TAT-------CAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACAC-ATTTCTTGTCGATTGAATAAACCATTGAGGCANGGAAATGNTCCACATCTCATGGGAAANCTACACTCTTAATATGAATTCTTTTCTGTACATACTCTGCAATCTTAATA-ATCACAGA-TTGTTGATAATT-AGATAACTTNCATAAGTCCAAGTATTTCNTATTCAATTTCCCACCATGCATGNAATAAAANATTNTGGACAAAGATATACCGAAACTTTTTGTAAGTAAATAATAANTAATAATGGNTTTTTTTTCCAGGNCAATTGTTTA------------TTTT-TG--CCAC------AAA--TGAT-CAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATAC--AATTACATCT-TGTT-GATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTGAAAA-TGTACAA-AG-AGAAACACA-CAGCTGAAAAANA-ATTGT--GGAC-AA-TAA-TTCT-GTATT-GTGAAAG-A-ACG------CTAGAATAT-GNTGTTGTTTTTGANGTTTTTAATTTNCNAGCTCCATGANNGTAGTGAA-TTT--AAC-TTTCTTCGTGGCTATGCTT-TCTCT-TTATTGAA-ATAATATTTTTGAT-GAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTT-NATATAT-TATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGCCAAAGCAGGAAGAGGGTTGANCNGGATAGCATTTTTAANAGAGCACAATATCCCATGGCACCATTTGGTGCT-TACACAAGTGATAGCC-----TACA----A-ATGTGAA-TTCCGTAAGATTGANAAGTTAGCTCATTCATTTATGCNNTTGATCCTGTGGCATCCATATGTAGTTATTGGGCAGAGGAAAAAAAACTATTAGGTAA-TGGTTTTGGCATTGATCCTTGAGG--TTTAGATC-CTTTAATATTT--------------------AAGTGCAACTTCTTAA--GTCATGGG-AAATTGGTCACTGGCA-TG---CT-AACTTTTGTACTGCCCATTCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATACTTTCAGAAGGAACAGTGCTGGCTCATCTGTATTAACAAGCATATATACGTCAAATGAATATCATCGTGAATNTCATTATAGCAATACAGGGATAGATAATGAAANTCTTTAAAAAGAAAGGGAGTGNGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGGAGGTTGANGGNGTGTAACAAANCGTTTCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTGCCCCCCCGCCCCCCTTGGCTATTCNGTCATTGGNATAATTGAAAGTGGATAACACATCAATGTT-AAAC----TA-ATTTTTCATTTTTAAT-CAG-AATTCAAAACTACAATAT-AACATATAANT-TGTGGGTGTTTNAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-TAAGGAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAAAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCA------AATGN-GTATTAAG--AATCTGAATTAANTTAATT-T--GGGAAACTC-TATAAAAAAA-----------------AAAAAATGCAAT-GCAGTTTCAGCGACC--AGAGAAAT--ATGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAAAT---A-ATACTTGTATG--TC-C-----GCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTCATTTTACCAANATNN--------CATA-CTGGAAAGTTGGGTG-ATGT-ATTG-----TTAGTTAT-AANTC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTAC-CTGAAATTGTAAGT-----GAA-ATA-TAT-TTA-----T-ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGGCGNTAANCGNCNCCTCGGGTTT-GATT-TTTAAAAATATAAGAACTATNATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TNTTTG-CATC-GG-TAAGGAATTTA-------TGCTGGCT-NC-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAA-ACCA-ATAC----AATACACAA--CAAAGC-TGCATCTTTGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGANTTAGG
Reference ( gi|2 ) : GTAAAGAAATACTTGCATACATCATAAAGCC---ACCATTAAGGGAA--TGATTGCATC---TCGAGACTAAATAGAA-----TGTCTCTGCCAGAAGT-TATGCA-TATA-AGTTTTTT-CATTATGCT-----AT--GAGAACATG-TCCAAATATGAATTATCTT-G--TAATAGTATTT-GTGAGT-AAGATTGTAGTTGATGTCATGCATTCTTTTTAA---AAC-TTATTTTTTC-TGAAATTGTTATTCTGAT----TTCCAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTCCAT---------T-------ATTGA-TAT-------CAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTTTTGT-GATTGAATAAACCATTGA-GCATGGAAATGATTCACATC-CATGGGAA-T-TACACTCTTAAT-TGAA-TCTTTT-TGT-CATA-TCTGCAAATCTAATACATTACAGACTTGT-GAGAATTCAGATAACTTCCATAAGTTCAA-------ATATT----TTCCC--CATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAA--TTTT-----ATAA-TAATAATTAATAACGATTTTTTTTTTT---GCAATTGTTTA------------TTTT-TG--CCACTGTGACAAA--TGAT-CAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAAATTTAATACCAAATTAAATCT-TGGC-AATT-G--TGATTTTTAAACTTATCAG-CTATTTCCTTCAGT-AGAGGACCTGAAAA-TGTACAA-AG-AGACACATA-CAGCTGAAAAATA-ATTGT--GGAC-AA-TAATTTCT-GTATT-GTGAAAG------------CTAGAATAT-GTTG-T---TTTGAAG-TTTTAATTTGCAAGCTCCATA-------TGAA-TGT--AACTTTTCTTCATGGCTATTCTT-TCTCT-TTATTGAA-ATAATATTTTTGGT-GAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTT-AATATATCTATTTGCA--AGTTAGAATCAT------ACATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGAC--AGCAAG-AGA-GGTTGTACAGGATAG-A-TTTTAA---AGCACAATATCCCATAGCA-CATTTGGTGCTATACACAAGTGATAGCCTTTGTTGCATTTGACATTTGAGTTTCTGTAAGA-TGACAA-TTAG-TCATTCATTTATGTTAT-G--T-TGTGGCATCCAT-TGTAGTTCTTG--CAGAGG----AAAACT-TTA-GTAA-TGGTTTTGGCATTGACCCTTGAGA--TTTAGATC-CTTTAG-ATTA--------------------AGGTTCAACTTCATAA--GTCATGGG-AAATTGGTCACTGGTAGTGGTACTAAACTTTTGTACTGCCTATCCACATCCGAGTAGTTGAATGGG-CACATTATCGTCATAATAGCGCATCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAAGAAGCATATATATGTCAA-------------TGAATATCATCATAGCAATAAAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTAGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGAAGGTGTAAAAAAAAACA-ACCAATATAACCCCCATGATGACCATCCC-AACAAAGAGGGGTG------------CCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATATTAAAAC----CA-ATTTTTCATTTTTAA--CAA-AATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGG-GCG-ATA-GCCCATG-TAGTTTAC-AAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGACATAAGAAGCTTTGTAACA-ATG-CAGGATACAG----AAA-TG--AAATACAGT-GTCAAAAGTATTTTC-AGACGTAACA-TTC-TTTGT-AAGGGATACTGAACCAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCA------CATGT-GTAGTAAG--AATTTGAATT-ATTTAATT-T--GGGAAACTC-TAAAAAAAAA----AA----AAAAAAAAAAAAATGCAAT-GCACTTTCAACAA-C--AGAAAAAT--GTGTAA-TTACAAGTGTGTAGGATTAATTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAACAA--T-GACAATT--TA-AT-TTTGTATGATTCACACAGTGCCCCCCCCCCCCCTTGCGTCCATAGTGACTTC--T-------AATTC--------CATA-CTGGAAAGTTGGGTG-ATGT-TTTGTTATATTATTTAT-AAATC-GTAGAAAAC-AAAACCCTTTAATTG--TTTATTAT-CTGAAATTGTAACT-----GAA-ATA-TATCTCATAAAGTCATATCAATCGCCCAGTCGT-AG--GTACATTAGTG----------------CGGATTT-GATT-TTTAAAAATATAAGAACTATGAATTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-AG-TAAGGAATTTA-------TGCTGGCT-AT-AAGTTCGTT-TTTA-CGCTG-TTTTGTGAGCGTAA-TCCAAATACTGTTAATACACAA--CAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAATAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|8 : GTAAAGAAATACTTGTATACATCATAAAGCCCC-ACCATTAAAGGAAAATTATTGCATC-----------------AA-----TGTCTCTGCCAGACGTATACGCAATATA-AGTTTTTTTCAATATGCT-----AT--GAGAACGTG-TCCAAATATGAATTATCTT-G--CAATAGTATTT-G--AATGAAGATTG-AATTGATGTCATGCAGTCTCTTTAA---AACATTTTTTTCCC-TGAAATTGTTAT---G-------TTCAGGGTATGGCTTAGAGG-ATAT-GCTGCATCTCATCGAGA--GCCTACAT---------T-------ATTGG-CAT-------CAAG-TTAAA
gi|7 : cagcccatagaccctctgcctcacccccttcaacttcaaatcctggatccacccatcaaattttcaatattggttattaaaattcattctTAAAATAATACTTGTATATATCATAAAGCCCC-ACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATATAG-----TATCTCTGCCAGAAGTATATGCAATATA-AGTTTATT-CATTATGCT-----ATATGAGAACATG-TCCAAATATGAATTACCTT-G--CAATAGTATTT-G--AGT-GAA---------GATGTCATGCAGTCTCTTTAA-----T-TTTTTTTTTT-TTAAATTGTTATTCTGAT----TTTCAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACAT---------TAATGATCATTGG-TAT-------CAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACAATT
gi|1 : gtccgacttcaaatcctggatccacccatcaaattttcaatattggttatAAATTATTGTATA--TCATAAAGCCCC-ACCATTAGGAAAA--TGATTGCATCATCTCGAGAC---ATTGAAGTATGTATCTCTGCCAGAATA-TATGCA--ATATAGTTT-----ATCATACTTCTATAT--GAGAACATT-GCCAAATATGAATTACCTT-GCATAATAGTATTT-G------AAG---GGAA---ATGTCATGCAGTCTCTTTAATTAAAA-TTCTTTT-------AATGGTTCTTCTGAT----TCAGAGGTTAGGGTT--AAAG-ATAT-GCTG--TCTCATTGAGGACGCCTACATAATGAATTCC-------ATTGT-TAT-------CAAGCTTCAAGAC-CACCATTTAC-CCTCA-CTGGACAC-ATTTCTTGTCGATTGAATAAACCATTGA-GCAGGGAAATAGTT-ACATCTCATGGGAAAG-TACACTCTTAAT-TGAA-TCTTTT--G--CATACTCTGCAATCTTAATA-ATCACAGA-TTGTTGATAATT-AGATAACTTCCATAAGTCCAA-------TTATTCAATTTCTCACTATGCATGAAATAAAAGATTGTGGACAAAGATATA--GAAACTTTT-----GTAA---ATAAATAATAATGGATTTTTTTTCC---CCAATTGTTTA------------TTGTGTG--CC-C----ACAAAAGTGAT-CAATGGTGAGTCAGACAGACTTCAAGTT-GTATA-TATGTACAGTTTTC-GAGTGC-CTCTGAAAGGTAAA-TTTAATAC--AATTACATCT-TGGTTGATT-G--TGATTT--AAACATATCAG-CTATTTC-TTCAGTCAGAGGACCTGAAAAATGTACAA--G-AGAAACACA-CAGCTGAAAAACA-TTAGT--GGAC-AAATACATTCT-GTATTTGTGAAAAGAAACATATGATCTAGAATAT-GGTA-TGTTTTTGAAG-TTTTAATTTGCTAGCTCCATAAATATAGTGAAATTT--AA--TTTCTTCGTGGC-ATGCTTATCTCT-TTATTGAA-ATGAT--TTTTGATTGAAACGAA-AGGTG-ATATG-TTCAA--TGTCGA------------TTTTTTGAATATATCTATTTGCG--AGTTAG-ATCAT------ATATAACACCTGGGTTCAACATG--------------TCCAATAACAACCAGTGCACAAACGAATGCCAAAGCAGGAAGA-GGTTG-ACCGGATAG-ATTTTTAAT--AGCAC-ATATCCCATGGCACCATTTGGTGCT-TACACAAGTGATAGCC-----TACA----A-ATGTGAA-TTCCGTAAGATTGACAAGTTAGCTCATTCA-TTATGCATT-G--TCTGTGGCATCCAT-TGTAGTT-TTG--CAAAGGAAAAAAAATTATTAGGTAATTGGTTT--GCATTGATCCTTGAGGCTTTTAGATC-CTTTAATATTT--------------------AAGTGCAACTTC-TAA--GTCATGGG-AAAATGGTCA-------TGGTACT-AACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGGCCACATTCTCGTCATAATAGC-CATCAAAACA-TGAATACTTTCAGAAGGAACAG--------CATCTGTATTAACAAGCATATATATGTCAAATGAATATCATCGTGAATATCATTATAGCAATACAGGGATAGATAATGAAAA--TTTAAAAAGAAAGGGAGTGCGTGGGTTGAAACCCA--TTTATACTATCCACCTAAAAAGAGGAGGTTGATGGGGTGTAACAAATCG---CAATATAA-CCCCATGATGACCATCCC-AAAGAAGAGGGGTGCCCCCCCGCCCCCCTTGGCTATTCAGTCATTGGGATAATTGAAAG-GGATAACACATCAATGTT-AAACTTTACA-ATTTTTCATTTTTAATCCAG-AATTCAAAACTACAATAT-AAC-TATAATT-TGTTGGTGTTTTAATAA----------ATGTACATTTGTC-CTGATGG-ATCAGG-AAC-ATATGTTCATGTTAGTTTACAAACAAAAATTACAC--ATAATTCTTATTTTTTAAAGAT-TAATGAACTTTGTAAAACATGATAGGATACGGTTCTAAACTGACAAATAC-GTGGTCAAAAGTATTTTCTTGACATAACAGTTCTTTTGTAAAAAGATACTGAA-CAACACATGCAATATCTATGATTAAAACATTACCATGTTTGATTA------AAAGCGGTATTAAG--AATCTGAATA-AATTAATTATCAGGAAAACTC-TATAAATAAA----CATTTT-------AAAAAATGCAATGGCAGTTTCAGCGA-CCAAGAGAAATCACTGTAATTTACAAGTGCTTAGGAT----------TTAATTATCAATCAGGAAG-CTGAACAAAAAGA--T--ACAA-----AGATACTTGTATG-----------GCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTCATT-------TATCCCACAATGACATA-CTGGAAAGTTGG--G-ATGT-ATTGTTA-GTTA---ATAAAATCTGTAGAAAACAAAAACCCTTTAATTGTCTTTATTAC-CTGAAATTGTAAGTGTTTCGAA-ATAGTAT---------TTATATCAATC-TCCAGTCGTAAG--GTACATTGGTGGCAGTAACTGCTTCT-CGGGTTTAGATTCTTTAAAAATATAAGAACTATCATTTGTTAACCTGCATCTAATAAATCCA----CTTCTTTCATT----TATGTG-CATC-AG---AGGAATTTA-------TACTGGCT-ATAAAGTTCGTTATTTACCGCT--TTTTGT-AG-GTAA-ACCAAATAC----------CAA--CAAAGC-TGCATATTGAGCAGCTGCCC-GGAAGTAGTAAATCGAAAGT-GTGAAAAGATAAACGAAGATTAGG
gi|5 : acagcccatagaccccggttctgcctataatgtcgttggcccccccctcccgtcagtccgacttcaaatcctggaaatccaccatcaaatttcatattggtttttaCATCATAAAGCCGGCACCATTAGGGAAA--TGATTGCATC---TCGAGACATAATAGAA-----T-TCTC-GCGAGAAGTATATGCA-GATA-AGTTTTTT-CATTATGCT------T--GAGAACATGTTCCAAATATGAATTATCTTGG--CAATAGTATTTGGTG----AAGATTGTAGTTGATGT-ATGCAGTTCTTTAAA---AGC-T--TTTTTTCATGAAATTGTTATTCTGATTTTATTCTAGGGTATGGTTTAGAAGAATATAGCTGCATCTCATTGAGA--G-CTACAT---------T-------AATGATTATTGGGGCATAAG--TCAAGACGCAGC-TTTACGC-TCAGCAG-ACACCATTTCTTGT-GATTG-ATAAACCATTGAGGCATGGAAATGTTCCAT-TC-CATGGGAA-TCTACA--TTTAATATGAATTCTTTTCTGTACAT--TCTGagaccat
gi|19 : tgtcgtgccccccgtccaacttcaaatcctggatccaccatcaaattttcagtattgggttattaacattcatttctgtaaagAGAAGTATATGCAATATA-AGTTTTTT-CATTCTGCT-----AT--GATAACATG-TCCAAATATAAATTATCTT-G--CAATGGTATT---TGAGTGAAGATTGTAGTTGATaatgt
gi|3 : ATAACTTGCATAAGTTCAAGTATTTCATATT----TTCCC--CATGC-TACAATAAA-TATTCTGGACAAAGATATACCGAA--TTTTTGTAAATAAATAA-AATTAATAATGATTTTTTTTTTTAGGGCAATTGTTTAGCATTGTTGTATTTTT-TGGGCCAC-------AA--T-ATACAATG-TGAGTCA-A-AGACTTCAAGTTTGTATACTATGTACAGTAT-CGTAGT-CGCTCTGAA-GGTAAA-TTTAATAGGCAATTAAATCTGTGTT-AATTTGATTGATTTTTAA--CTATAAGGCTATTTCCTTCAGT-AAGCGA-CTGAAAACTGTACAAGAGAAAACCCAGAGCAGCTGAAAAATACATTGTTGGGAC-AA-T-ATTTCTGGTATT-GTTGAAGCATATGATA---CTAGATAATGGTTGTT---TTTGACGTTTTTAATTTTCAAGCTCCATGATAGT--TGAA-TTTTAAAC--TTCTTCGTGGCTATGCTT-T-TCTGTTATTGAATATA----TTTTGAT-G-AACGAAGAGGTGAATATGCTTCAATGTGTCG-------------TTTTTT-GAAATAT---TTTGCA--A-TTAGAATCAT-------TATAAACCCTGGTTTCAACATG--------------T-CAAT--C-A-CAGTG--TCA---AATG-C---GCAGG-AGAGGGTTGACCAGGATAGCA-TTTTAAAAGAGCA-AATAT-CCATAG-A-CA
gi|9 : taatAATTGTTTA------------TTTG-TG--CCAC------AAA--TGAT-CAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTACATCT-TGTT-GATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTGAAAA-TGTAC-A-AG-AGAAACACA-CAGCTGAAAAAAC-ATTGT--GGACAAA-TAA-TTCT-GTATT-GTGAAAG------------C----ATAT-Gagatgaaaatagtcattcatttatgttattgatctgtggcatcatatgtagttattgggcagaggaactttaagtaatggttttgcattgcccttgagatttacatcgctttagattaggtgcacattcttaagtcataggtgcaacttcttaagtcatgggaaattggtaactggtactaaacttttgtactgcccattcacatccgagtagttgaatgggcacattctcgtcataatagccaccaatacattgaatacttcagaaggaacagtgctggctcatctgtaacaagcatatatacgtcaaatgaatcttaatacagggatagataatgaaactctttaaaaagaaagggagtgggtgggttgaaacccaagtttatactatccacctaaaaagaggtgagggtgtaaacatttcaatataacccccatgatgaccatcccaaacaaagaggggtgccccttgttattctgtcattgtataatgaaagtggataaacatcaataaactaaatttttcacaagaattcaaaactacaatataacatataagatgtgggtgtttgaatgaatgtacgtacatgtacattgtctctgatggcatcaggagcatagtccatatagtttacaaacaaaattacacatatatttattttttaaagattaaaggagttttat
gi|25 : AA-TTT--AACTTCTCTT---GGTTATGCTT-TCTCT-TTATTGAA-ATAATATTTTatcta
gi|16 : -TCTCT-TTATTGAA-ATCATATTTT-GGT-GAAAAGAA-AGGTG-ATATG-TTCAA--TGTCATTCCTTCAAATGTTTTTTT-TATATATATATTTGCATTAGTTAGAATCAT------ATATAACACCTGGTTTCAA
gi|24 : --AGTTAGAATCATTCATCTATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-A
gi|23 : ACATCTGGTTTCAACATGACACTAGCTAGATGTCCAAT-AC-ACCAGTG-ATCAAC-AA
gi|3 : gAAGA-TGAAAA-T-AG-TCATTCATTTATGTTATTGATC-TGTGGCATC-ATATGTAGTTATTGGGCAGAGG----AA--CT-TTAAGTAA-TGGTTTTG-CATTG-CCCTTGAGA--TTTACATCGCTTTAG-ATTAGGTGCACATTCTTAAGTCATAGGTGCAACTTCTTAA--GTCATGGG-AAATTGGTAACTGGTA------CTAAACTTTTGTACTGCCCATTCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAGTGCTGGCTCATCTG---TAACAAGCATATATACGTCAAA------------TGAATCTTA--------ATACAGGGATAGATAATGAAACTCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGAGGGTGT------AAACATTTCAATATAACCCCCATGATGACCATCCCAAACAAAGAGGGGTGCC----------CCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAAT----AAAC----TA-A------ATTTTTCA--CAAGAATTCAAAACTACAATAT-AACATATAAGA-TGTGGGTGTTTGAATGAATGTACGTACATGTACA-TTGTCTCTGATGGCATCAGGAGC--ATA-GTCCATA-TAGTTTACAAAC-AAAATTACACATATATTTA---TTTTTTAAAGATTAAAGGAGTTTTAT
gi|20 : taatataacttgcataagttcaagtatttcatattttccccatgctacaataaatattctggacaaagatataccgaatttttgtaaataaataaaattaataatgatttttttttttagggcaattgtttagcattgttgtattttttgggccacaatatacaatgtgagtcaaagacttcaagtttgtatactatgtacagtatcgtagtcgctctgaaggtaaatttaataggcaattaaatctgtgttaatttgattgatttttaactataaggctatttccttcagtaagcgactgaaaactgtacaagagaaaacccagagcagctgaaaaatacattgttgggacaatatttctggtattgttgaagcatatgatactagataatggttgtttttgacgtttttaattttcaagctccatgatagttgaattttaaacttcttcgtggctatgcttttctgttattgaatatattttgatgaacgaagaggtgaatatgcttcaatgtgtcgttttttgaaatattttgcaattagaatcattataaaccctggtttcaacatgtcaatcacagtgtcaaatgcgcaggagagggttgaccaggatagcattttaaaagagcaaatatccatagacTA-GTAA-TGGTTTTGGCATTGATCCTTGAGG--TTTAGATC-CTTTAATATTT--------------------AAGTGCAACTTCTTAA--GTCATGGG-AAATTGGT
gi|15 : atgGTGCAAGTCTATAATAATCATGGGGAAATTG-TCACTAGCATTG------AGCTCTTGTACTGCTCATTAATATCTTAGTAGCTGAATGGG-CACATTCCCATCATAGTATC-CACAAATACATTGA
gi|6 : actAAAC----TACATTTTTCATTTTTAAT-CAG-AATTCAAAACTACAATAT-AACATATAATT-TGTGGGTGTTTTAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAACATATA-GTTCATG-TAGTTTACAAAC-AAAATTACAC--ATATCTA---TTTTTTAAAGAT-TAAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACATAACA-TTC-TTTGT-AAAAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCA------AATAG-GTATTAAG--AATCTGAATTAATTTAATT-T--CGGAAACTC-TATAATAAAATTTT-------------AAAAAATGCAAT-GCAGTTTCAGCGACC--AGAGAAAT--ATGTAA-TTACAAGTGCTTAGGATTAATc
gi|4 : tACTTTCAA--GAA-GAT---AAACTACAATATTAAC-TATAAGTATGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATAAGTCCATG-TAGTTTAC-AAA-CAAATTACAC--ATATTTAT--TTTTT-AAAGAT-TAAGAAGCTTTGTAA-A-ATG-TAGGATACAGTTT-AAA-TG--AA-TACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGG-ATACTGAAC-AACACATGCA-TAT-TATGATTAAAACATTTACATG-TTGATCA------AATAG-GTATTAAG--AATTTGAATT-AATTTATT-T--GGGAA-CTC-TATAAAAAA---------------------AAATGCAAT-GCAGTTTCAGCGACC--AGAAAAAT--ATGT-A-TTACAAGTG-----------CTTAGGATTAATTATCAATCAGGAAGACTA-ACAAAAAGATGT-GACAAATAGTT-AC-TTTGTA----TCCC------CCCCCCCCCCCCCTTGCGTTCATAGTGTCTTC--TTTACCAAAATGA--------CATA-CTGGAAAGTTGGGTGAATGT-ATTG-----TTAGTTAT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTATTTATCCTGAAATTGTAAGT-----G-A-ATA-TAT-TTA-------ATATCAATCGCCCAGTCGT-AGGTGTACATTGGTGGAGTTAAACTGCATCTCGGATTT-GATT-TTTAAAAATATAAGAACTATATATTTGTTACCTGCATCT-ATAAATCCA----CTTCTTCCACTTGTGTGTTTGCCATCAAG-TAAGGAATTTT-------TGCTGCCT-TT-AAGTTCTTT-TTCA-CGCTG-TTTTGTG-GCGTAA--CCA---------AATACACAA--CAAAGC-TGCATCTT-GGCAGCTGCCC-GGAAGTAGTAACTCGAA
gi|18 : tAAAACATTTACATG-TTGATCAAATGTGCATGT-GTATTAAAATAATTTTAATTAATTTAATT-T--GGGAA---CATAAA------------------------AAAAATGCAAT-GCAGTTTCAGCGA-C--
gi|21 : TCAGGAAAACTG-ACAAAAAGA--TAGACAAAT--AA-ATACTTATATGATTCACACAGTGCCCCTTTCCTGCCTc
gi|14 : --------CATAACTGGA----TGGATG-AAGTATTT------TTAATCAT-AACTC-AAGAAAAAT-CAAACCTTTTAACTA--TTCATTGC-CTAAAATTGTCATT-----AAAGATA-T
gi|17 : cctgcattcagattgactcacgtaccgcatgTTAT-AACTC-GTAGAAAAC-AAAACTCTTTAGCTG--TTTATTAC-CGGGAATTGTAAGT-----GAA-ATA-CATCTTAT----T----TCAATCGCCCAGTCGT-GA--GTACATTGGt
gi|10 : gT-GATT-TT---AAA-ATAAGAACTAT-ATTTGTTTACTTGCATCT-ATAA-TCCA----CTTTTTCCACT----TGTT-G-CATC-AGGTAAGGAATTTA-------TGCT--CTCAC-AAGTTTGTT-TT-A-CCCTGCTTTTGTAAGCGTAAAGCCATATGC-------A-ACAA--CAAAGCTTGCA-CTTCGACAGCTGCCCGGGAAGTAG-AAATCGAAAGTGG---AAAG-T-AACGA-ACTTAag
gi|11 : AACTATTA--TGTTTACCTGCATCT-ATCGA--CAAGGTTTTTTTTCTCT----TCTTAG-CATC-GG-TTGGGAATCTAAATAAACTGC-AGCT-CT-GAGT-CG------A-CCCT---TTTATATGCGTA----CATGTACACTCAA-ACGCAAAACAAAGC-GGCATTATTGTCTGCCGCCT-TGAAGTATTGA-CCGAAATT-G---AAAG-TAAACGAGATTTAGGcaga
gi|13 : CT----TTTTTG-CATC-GA-AAGGGAACATA-------TACAGGCT-GC-AGGTTTGTT-TTCA-TCTTG-TCATATGAGTGCAA-CC--------GT--AGGCAAAA--CAA--------TCTTTGACGGCTGTCC-AGAAGCAGTAT-TTGAAAGT-G---AAAG-TGGACG
gi|12 : TTG-CATC-AG-TGAGGAATTTA-------TGCAGGCT-AC-AAGTTTGTT-TTCA-CGCTG-TTTTGTGAGCGTAA-ACCAA----------TGCACAA--CAAAGC-TGCATCGTTGACATCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGA
gi|22 : AATTCACAA--CAAAGC-TGCATCTTTGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAG
1 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|26 ): CATAGTATCCACAAATACATTGACTTATTC
Alignments
lowQualScore : 11111111111111
lowQualScore : 11 11 1111 111 11111111 2222 111 11 1111 11 66666666666666666 22222 1 1 1 1 1 1 2 2 11 22 1 222 2 11 33333 22 2 2 1 22 666666666666666 22 1 44444444444444444 2 333333 555555555555 1 11 333333 1111 1 1 1 1 1 1 1 1 1 1 33333 1 1 1 11 1 1 2 1 1 111 1 11 1 1 111 1 1 9999999999999999 33333 44444444 1 11 111 1 1 1 1 11 6666666666666 1 33 222 2222222 44444444444444 11 11 1 44444 1 1 2 1111 1 2 6666666666666666666 111 2222 11 2 2 4444444444 2 1 33 33333333333 1 1 11 1 555555555555555555555555 1 11 555555555555 1 1 1 77777777 222 00000000000000 4444 22222 3333 8888888888 2 2 2 2 11 1 222222 11 1 3333333333 11 111 11 1 1 11 1 1 1 1 1 1 1 222222 11 11 555555555555555555555555 111 1 2222 1 11111 2222 1 66666666666 555555555555 11 1 1 22222 11 22222 55555555555 1 11 66666666666666 1 1 11 1111 1111 1 1111111 1111 11 55555555555555555 111
lowQualScore : 11 33 5 0 4444 333 1 777 0 1 3 6 66666666 6 6 99 2222 999999 1 0 444 11 888 0 0 7777 0 8 8 11 99999999999999999 00000 88 0 0 0 0 0 0 0 3 7 33 1 1 44 2 7 555 6 3 44 22222 22 6 0 0 5 00 1 0 888888888888888 22 7 1 7 88 4 00000000000000000 3 1 11 999999 111111111111 0 33 888888 4444 3 0 2 0 0 0 0 0 0 0 0 0 11111 2 0 0 0 33 3 3 0 2 0 2 0 3 5 0 777 1 0 33 0 0 777 0 0 0000000000000000 11111 1 7 7 1 1 44444444 0 33 555 2 0 3 8 8 0 0 8 3 0 3 0 0 0 33 5555555555555 1 0 33 111 0 3333333 77777777777777 88 00 33 3 0 22222 7 3 6 1 4 3 7 1111 7 6 7 5 0 1111111111111111111 777 8888 44 1 3 3 7 7777777777 6 3 5 00 44444444444 2 0 3 2 3 33 0 888888888888888888888888 1 11 8 2 555555555555 0 0 0 3 7 7 11111111 111 0 7 00000000000000 88 1 7 4444 1 1 44444 1 6666 6 7 77 3333333333 3 0 1 3 1 3 7 3 11 0 222222 3 77 8 0 1 8 1 5555555555 8 0 0 99 88 8 0 8 0 11 111 0 0 8 8 33 0 999 0 33 3 3 0 0 0 0 0 7 0 3 0 8 333333 99 11 0 0 1 0 8 11 0 0 999999999999999999999999 8 8 444 3 0 99 9999 3 0 77777 0000 0 3 6 11111111111 4 3 111111111111 11 0 3 6 0 55555 8 8 1 8 8 11 8 5 00000 0 8 00000000000 2 0 33 77777777777777 0 0 0 3 3 66 0 0 8 11 7777 4444 1 1 5 1 22 8888888 5 1111 5 5 5 0 00 33 77 00000000000000000 5 3 5 3 5 000 5 0 1 1
lowQualScore : .. .. . . .... ... . ... . . . . ........ . . .. .... ...... . . ... .. ... . . .... . . . .. ................. ..... .. . . . . . . . . . .. . . .. . . ... . . .. ..... .. . . . . .. . . ............... .. . . . .. . ................. . . .. ...... ............ . .. ...... .... . . . . . . . . . . . . ..... . . . . .. . . . . . . . . . . ... . . .. . . ... . . ................ ..... . . . . . ........ . .. ... . . . . . . . . . . . . . . .. ............. . . .. ... . ....... .............. .. .. .. . . ..... . . . . . . . .... . . . . . ................... ... .... .. . . . . .......... . . . .. ........... . . . . . .. . ........................ . .. . . ............ . . . . . . ........ ... . . .............. .. . . .... . . ..... . .... . . .. .......... . . . . . . . . .. . ...... . .. . . . . . .......... . . . .. .. . . . . .. ... . . . . .. . ... . .. . . . . . . . . . . . . ...... .. .. . . . . . .. . . ........................ . . ... . . .. .... . . ..... .... . . . ........... . . ............ .. . . . . ..... . . . . . .. . . ..... . . ........... . . .. .............. . . . . . .. . . . .. .... .... . . . . .. ....... . .... . . . . .. .. .. ................. . . . . . ... . . . .
lowQualScore : 22 00 0 8 8888 000 0 888 8 7 5 7 88888888 7 7 22 2222 222222 0 8 000 22 888 8 8 0000 8 0 0 00 00000000000000000 00000 88 0 0 0 0 0 0 0 3 3 33 0 0 00 3 3 000 7 7 77 00000 33 7 0 0 5 77 0 7 777777777777777 00 3 0 3 33 0 33333333333333333 7 0 77 333333 222222222222 0 88 888888 8888 2 0 5 0 0 0 0 0 0 0 0 0 22222 5 0 0 0 88 2 2 0 5 0 5 0 2 5 0 555 0 0 88 0 0 555 0 0 9999999999999999 00000 0 3 3 0 0 00000000 0 88 888 5 2 2 0 0 8 8 0 2 0 2 0 0 0 88 0000000000000 0 0 22 555 8 8888888 00000000000000 88 55 22 2 0 77777 3 3 7 0 0 3 3 0000 3 7 3 0 0 0000000000000000000 777 3333 77 0 3 3 3 0000000000 7 7 3 00 77777777777 0 0 2 5 2 88 0 555555555555555555555555 2 00 0 5 888888888888 0 0 0 2 3 3 00000000 777 7 3 33333333333333 33 0 3 0000 0 0 33333 0 0000 7 3 33 3333333333 3 7 0 3 0 7 3 3 00 0 222222 2 00 0 6 0 0 0 0000000000 0 8 8 44 88 0 8 0 8 00 888 8 8 0 0 22 0 000 0 88 2 2 0 0 0 0 0 0 0 2 0 0 000000 00 00 8 8 0 8 0 00 8 8 888888888888888888888888 0 0 888 2 0 55 5555 2 0 22222 8888 0 2 5 44444444444 0 2 888888888888 88 0 2 5 0 00000 0 0 0 0 0 00 0 0 00000 8 0 22222222222 5 0 88 33333333333333 7 0 0 2 2 88 8 8 0 66 0000 2222 0 7 7 4 00 6666666 4 6666 7 3 7 7 00 44 44 11111111111111111 0 4 0 4 7 000 7 1 0 0
consensus : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAAT--GTCTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AAN-TTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACAT---------TAATG---ATT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGAGGCATGGAAATGNTT-ACATCCCATGGGAAA-CTACACTCTTAAT-TGAATTCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAAGTAT----TATT---TTTCCC-CCATGCATGCAATAAAATATT-TGGACAAAGATATA--GAA--TTTTTGT--GTAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC------ACAA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGT-AAATTTAATA--CCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTGAAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGAC-AA-TA-A-TTCTG-TATT-GTGAAAG-A---GACG------CTAGAATATG-TGT-GTTTTTGAAGTTTTTAATTTGCAAGCTCCATGA--GT-GTGAA-TTT--AAC-TTTCTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGGT-GAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTGA-TATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAATA-CA-CCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-ATTTTTAA-AGAGCACAATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---C-----TACA----A-ATGCGAA-T-TCCGTA----AGATTGACAA-TTAG-TCATTCATTTATGC-ATTGATNCTGTGGCATCCAT-TGTAGTT-TT--GCAGAGGAA--AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----T-ACT-AA-CTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATACTTTCAGAAGGAACAG--------CATCTGTA-TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGANGGTGTG-AA-AAAACG--CCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAA------ATG-GGTATTAAG--AATTTGAATTAATTTAATT-T--GGGAAACTCT---------ATAAAAAAA--TT--AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACCG-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG-G-TAA-C--C-TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CC-A-ACGC----AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
Reference ( family-4284 ) : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAGGGGAAAATGATTGCATC---TCGAGACATAATAGAAT--ATCTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AAC-TTTTTTTTTCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACAT---------T-------ATT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACA-CATTTCTTGTCGATTGAATAAACCATTGAGGCANGGAAATGNTCCACATCTCATGGGAAANCTACACTCTTAATATGAATTCTTTTCTGTACATACTCTGCAATCTTAATA-ATCACAGA-TTGTTGATAATT-AGATAACTTNCATAAGTCCAAGTATTTCNTATTCAATTTCCCACCATGCATGNAATAAAANATTNTGGACAAAGATATACCGAAACTTTTTGTAAGTAAATAATAANTAATAATGGNTTTTTTTTCCAGGNCAATTGTTTA------------TTTT-TG--CC------ACAA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGT-AAATTTAATA--C--AATTACATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTGAAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAANA-ATTGT--GGAC-AA-TA-A-TTCTG-TATT-GTGAAAG-----AACG------CTAGAATATGNTGTTGTTTTTGANGTTTTTAATTTNCNAGCTCCATGANNGTAGTGAA-TTT--AAC-TTTCTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGAT-GAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTNA-TATAT-TATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAATA-CA-CCAGTG-ATCAAC-AATGCCAAAGCAGGAAGAG-GGTTGANCNGGATAGCATTTTTAANAGAGCACAATATCCCATGGCACCATTTGGTGCT-TACACAAGTGATAGC---C-----TACA----A-ATGTGAA-T-TCCGTA----AGATTGANAAGTTAGCTCATTCATTTATGCNNTTGATCCTGTGGCATCCATATGTAGTTATTGGGCAGAGGAAAAAAAACTATTAGGTAA-TGGTTTTGGCATTGATCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTCTTAA--GTCATGGG-AAATTGGTCACTGGCA----T-GCT-AA-CTTTTGTACTGCCCATTCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATACTTTCAGAAGGAACAGTGCTGGCTCATCTGTATTAACAAGCATATATACGTCAAATGAATATCATCGTGAATNTCATTATAGCAATACAGGGATAGATAATGAAANTCTTTAAAAAGAAAGGGAGTGNGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGGAGGTTGANGGNGTGTAACAAANCGTTTCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTGCCCCCCCGCCCCCCTTGGCTATTCNGTCATTGGNATAATTGAAAGTGGATAACACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAANT-TGTGGGTGTTTNAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGGAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAAAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAA------ATG-NGTATTAAG--AATCTGAATTAANTTAATT-T--GGGAAACTCT---------ATAAAAAAA------AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTCATTT-TACCAANATNNCATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AANTC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGGCGNTAANCGNCNCCTCGGGTTT-GATT-TTTAAAAATATAAGAACTAT-NATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TNTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CC-A-ATAC----AATACACAACAAAGC-TGCATCTTTGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGANTTAGG
gi|1 : AAATTATTGTATA---TCATAAAGCCC-CACCATTAGG--AAAATGATTGCATCATCTCGAGACATTGAAGTATGTATCTCTGCCAGAA-TATATGCAATATA-GTTT-----ATCATAC--TTCTATATGAGAACATTG-CCAAATATGAATTACCTTG-CATAATAGTATTTG-AAGGGAA-----------ATGTCATGCAGTCTCTTTAATTAAAA-TTCTTTT------AATGGTTCTTCTGATTCA----GAGGTTAGGGTT--AAAG-ATAT-GCTG--TCTCATTGAGGACGCCTACATAATGAATTCC-------ATT-----GTTATCAAGCTTCAAGAC-CACCATTTAC-CCTCA-CTGGACA-CATTTCTTGTCGATTGAATAAACCATTGAG-CAGGGAAATAGTT-ACATCTCATGGGAAAG-TACACTCTTAAT-TGAAT-CTTTT----GCATACTCTGCAATCTTAATA-ATCACAGA-TTGTTGATAATT-AGATAACTTCCATAAGTCCAA-------TTATTCAATTTCTCACTATGCATGAAATAAAAGATTGTGGACAAAGATATA--GAAACTTTT-----GTAAATAA---ATAATAATGGATTTTTTTTCC---CCAATTGTTTA------------TTGTGTG--CCC-----ACAA-AAGTGATCAATGGTGAGTCAGACAGACTTCAAGTT-GTATA-TATGTACAGTTTTC-GAGTGC-CTCTGAAAGGT-AAATTTAATA--C--AATTACATCT-TGGTTGATT-G--TGATTT--AAACATATCAG-CTATTTC-TTCAGTCAGAGGACCTGAAAAATGTACAA-GAGAAA-CACA---CAGCTGAAAAACA-TTAGT--GGAC-AAATACA-TTCTG-TATTTGTGAAAAGA---AACATATGATCTAGAATATGGTAT-GTTTTTGAAGTTTT-AATTTGCTAGCTCCATAAATATAGTGAAATTT--AA--TTTCTTCGTGGC-ATGCTTATCTCT-TTATTGAAATGAT---TTTTGATTGAAACGAA-AGGTG-ATATG-TTCAA--TGTCGA------------TTTTTTGAATATATCTATTTGCG--AGTTAGA-TCAT------ATATAACACCTGGGTTCAACATG--------------TCCAATAACAACCAGTGCACAAACGAATGCCAAAGCAGGAAGAG-G-TTGACC-GGATAG-ATTTTTAATAG--CACA-TATCCCATGGCACCATTTGGTGCT-TACACAAGTGATAGC---C-----TACA----A-ATGTGAA-T-TCCGTA----AGATTGACAAGTTAGCTCATTCA-TTATGC-ATTG--TCTGTGGCATCCAT-TGTAGTT-TT--GCAAAGGAAAAAAAATTATTAGGTAATTGGTTT--GCATTGATCCTTGAGGCTTTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTC-TAA--GTCATGGG-AAAATGGTCA-TGG------T-ACT-AA-CTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGGCCACATTCTCGTCATAATAGC-CATCAAAACA-TGAATACTTTCAGAAGGAACAG--------CATCTGTATTAACAAGCATATATATGTCAAATGAATATCATCGTGAATATCATTATAGCAATACAGGGATAGATAATGAAAA--TTTAAAAAGAAAGGGAGTGCGTGGGTTGAAACCCA--TTTATACTATCCACCTAAAAAGAGGAGGTTGATGGGGTGTAACAAATCG---CAATATAA-CCCCATGATGACCATCCCAAA-GAAGAGGGGTGCCCCCCCGCCCCCCTTGGCTATTCAGTCATTGGGATAATTGAAAG-GGATAACACATCAATGTT-AAACTTTACA-ATTTTTCATTTTTAATCCAGAATTCAAAACTACAATAT-AAC-TATAATT-TGTTGGTGTTTTAATAA----------ATGTACATTTGTC-CTGATGG-ATCAGGAACATAT--GTTCATGTTAGTTTACAAACAAAAATTACAC--ATAATTCTTATTTTTTAAAGAT-T-AATGAACTTTGTAAAACATGATAGGATACGGTTCTAAACTGACAAATAC-GTGGTCAAAAGTATTTTCTTGACATAACAGTTCTTTTGTAAAAAGATACTGAA-CAACACATGCAATATCTATGATTAAAACATTACCATGTTTGATTAA------AAGCGGTATTAAG--AATCTGAA-TAAATTAATTATCAGGAAAACTCT---------ATAAATAAACATTTTAAAAAATGCAATGGCAGTTTCAGCGACCAAGAGAAATCACTGTAATTTACAAGTGCTTAGGAT----------TTAATTATCAATCAGGAAG-CTGAACAAAAAGA--T--ACAA-A--GA-TACTTGTATG-----------GCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTCATTTATCCCACAATGACATA-CTGGAAAGTTGG--G-ATGTATTG-----TTAGTTAATAAAATCTGTAGAAAACAAAAACCCTTTAATTGTCTTTATTA-CCTGAAATTGTAAGTGTTTCGAAATAGTAT-T--T------ATATCAATC-TCCAGTCGTAAG--GTACATTGGTGGCAGTAACTG-CTTCTCGGGTTTAGATTCTTTAAAAATATAAGAACTAT-CATTTGTTAACCTGCATCTAATAAATCCA----CTTCTTTCATT----TATGTG-CATC-AG--AGGAATTTA-------TACTGGCTA-TAAAGTTCGTTATTTACCGCT--TTTTGT-AG-GTAAA-CC-A---------AATAC-CAACAAAGC-TGCATATTGAGCAGCTGCCC-GGAAGTAGTAAATCGAAAGT-GTGAAAAGATAAACGAAGATTAGG
gi|10 : acagcccatagaccccggttctgcctataatgtcgttggcccccccctcccgtcagtccgacttcaaatcctggaaatccaccatcaaatttcatattggtttttaT-GATT-TT---AAA-ATAAGAACTAT--ATTTGTTTACTTGCATCT-ATAA-TCCA----CTTTTTCCACT----TGTT-G-CATCAGGTAAGGAATTTA-------TGCT--CTCAC-AAGTTTGTT-TT-A-CCCTGCTTTTGTAAGCGTAAAGCC-ATATGC----AA----CAACAAAGCTTGCA-CTTCGACAGCTGCCCGGGAAGTAG-AAATCGAAAGTGG---AAAG-T-AACGA-ACTTAagaccat
gi|11 : AACTAT-TAT--GTTTACCTGCATCT-ATCGA--CAAGGTTTTTTTTCTCT----TCTTAG-CATC-GGTTGGGAATCTAAATAAACTGC-AGCTC-T-GAGT-CG------A-CCCT---TTTATATGCGTACA-TG-T-ACACTCA-AACGCAAAACAAAGC-GGCATTATTGTCTGCCGCCT-TGAAGTATTGA-CCGAAATT-G---AAAG-TAAACGAGATTTAGGcaga
gi|12 : TTG-CATC-AGTGAGGAATTTA-------TGCAGGCTA-C-AAGTTTGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CC-A-ATGC----A-----CAACAAAGC-TGCATCGTTGACATCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGA
gi|13 : CT----TTTTTG-CATC-GAAAGGGAACATA-------TACAGGCTG-C-AGGTTTGTT-TTCA-TCTTG-TCATATGAGTGCAA--CC-GTAGGC----AA-----AACAA--------TCTTTGACGGCTGTCC-AGAAGCAGT-ATTTGAAAGT-G---AAAG-TGGACG
gi|14 : CCTGCATTCAGATTGACT-CACGT--ACCG-CATG-CATAACTGGA----TGGATG-AAGTATTT-----TTAATC-AT-AACTC-AAGAAAAAT-CAAACCTTTTAACTA--TTCATTG-CCTAAAATTGTCA-T-----TAAAGA-TAT-T
gi|15 : GTGCAAGTCTATAATAATCATGGGGAAATTG-TCACTAGCA----TTG---AG-CTCTTGTACTGCTCATTAATATCTTAGTAGCTGAATGGG-CACATTCCCATCATAGTATC-CACAAATACATTGA
gi|16 : act-TCTCT-TTATTGAAATCATAT-TTT-GGT-GAAAAGAA-AGGTG-ATATG-TTCAA--TGTCATTCCTTCAAATGTTTTTTTTA-TATATATATTTGCATTAGTTAGAATCAT------ATATAACACCTGGTTTCAAc
gi|17 : GTT-AT-AACTC-GTAGAAAAC-AAAACTCTTTAGCTG--TTTATTA-CCGGGAATTGTAAGT-----GAAATA-CAT-CT-T------ATTTCAATCGCCCAGTCGT-GA--GTACATTGG
gi|18 : AAAACATTTACATG-TTGATCAAATGTGCATG-TGTATTAAAATAATTTTAATTAATTTAATT-T--GGGAA----C---------AT-----AA------AAAAAATGCAAT-GCAGTTTCAGCGACC-ag
gi|19 : AGAAGTATATGCAATATAAGTTTTTT-CATTCTGC--T-----ATGATAACATGT-CCAAATATAAATTATCTTG-CA--ATGGTATT--TGAGTGAAGATTGTAGTTGAT
gi|2 : GTAAAGAAATACTTGCATA-CATCATAAAGCC---ACCATTAAGGGAA--TGATTGCATC---TCGAGACTAAATAGAAT--GTCTCTGCCAGAAGT-TATGCA-TATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-TA--ATAGTATTTGTGAGT-AAGATTGTAGTTGATGTCATGCATTCTTTTTAA---AAC-TTATTTTTTCTGAAATTGTTATTCTGATTTC----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTCCAT---------T-------ATT-----GATATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTTTTGT-GATTGAATAAACCATTGA-GCATGGAAATGATTCACATC-CATGGGAA--TTACACTCTTAAT-TGAA-TCTTTT-TGT-CATA-TCTGCAAATCTAATACATTACAGACTTG-TGAGAATTCAGATAACTTCCATAAGTTCAAATAT-----------TTTCC--CCATGCATGCAAT-AAATATT-TGGACAAAGATATA--GAA---TTTTAT-----AATAATAATTAATAACGATTTTTTTTTTT---GCAATTGTTTA------------TTTT-TG--CCACTGTGACAA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAAATTTAATA--CCAAATTAAATCT-TG-GCAATT-G--TGATTTTTAAACTTATCAG-CTATTTCCTTCAGT-AGAGGACCTGAAAA-TGTACAAAGAGACA-CATA---CAGCTGAAAAATA-ATTGT--GGAC-AA-TA-ATTTCTG-TATT-GTGAAA---------G------CTAGAATATGTTG----TTTTGAAG-TTTTAATTTGCAAGCTCCAT-------ATGAA-TGT--AACTTTTCTTCATGGCTATTCTT-TCTCT-TTATTGAAATAATAT-TTTTGGT-GAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTAA-TATATCTATTTGCA--AGTTAGAATCAT------ACATAACACCTGGTTTCAACATG--------------TCCAATA-CA-CCAGTG-ATCAAC-AATG-----ACAGCAAGAGAGGTTGTACAGGATAG-ATTTT----AAAGCACAATATCCCATAGCA-CATTTGGTGCTATACACAAGTGATAGC---CTTTGTTGCATTTGACATTTGAGTT-TCTGTA----AGA-TGACAA-TTAG-TCATTCATTTATG---TT-ATGTTGTGGCATCCAT-TGTAGTTCTT--GCAGAGG----AAAACT-TTA-GTAA-TGGTTTTGGCATTGACCCTTGAGA--TTTAGATC-CTTTA----------G-ATT---------AAGGTTCAACTTCATAA--GTCATGGG-AAATTGGTCACTGGTAGTGGT-ACTAAA-CTTTTGTACTGCCTATCCACATCCGAGTAGTTGAATGGG-CACATTATCGTCATAATAGCGCATCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAAGAAGCATATATATGTC-AATGAATATCATC------------ATAGCAATAAAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTAGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGAAGGTGTAAAAAAAAACA-ACCAATATAACCCCCATGATGACCATCCC-AACAAAGAGGGGTG------------CCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATATTAAAACC----A-ATTTTTCATTTTTAA--CAAAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGG-GCG-ATA-GCCCATG-TAGTTTAC-AAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGACAT-AAGAAGCTTTGTAACA-ATG-CAGGATACAG----AAA-TG--AAATACAGT-GTCAAAAGTATTTTC-AGACGTAACA-TTC-TTTGT-AAGGGATACTGAACCAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAC------ATG-TGTAGTAAG--AATTTGAATT-ATTTAATT-T--GGGAAACTCTAAAAAAAAAAAAAAAAAA------AAAAAATGCAAT-GCACTTTCAACAA-C-AGAAAAAT-G-TGTAA-TTACAAGTGTGTAGGATTAATTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAACAA--T-GACAATTT-AA-T-TTTGTATGATTCACACAGTGCCCCCCCCCCCCCTTGCGTCCATAGTGACTTC-----TA-----ATTCCATA-CTGGAAAGTTGGGTG-ATGTTTTGTTATATTATTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAATTG--TTTATTA-TCTGAAATTGTAACT-----GAAATA-TATCTCATAAAGTCATATCAATCGCCCAGTCGT-AG--GTACATTAGTG----------------CGGATTT-GATT-TTTAAAAATATAAGAACTAT-GAATTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-AGTAAGGAATTTA-------TGCTGGCTA-T-AAGTTCGTT-TTTA-CGCTG-TTTTGTGAGCGTAAT-CCAA-ATACTGTTAATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAATAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|20 : GTAA-TGGTTTTGGCATTGATCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTCTTAA--GTCATGGG-AAATTGGT
gi|21 : atgtaTCAGGAAAACTG-ACAAAAAGA--TAGACAA-ATAAA-TACTTATATG--
gi|22 : ----AATTCACAACAAAGC-TGCATCTTTGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGattcacacagtgcccctttcctgcct
gi|23 : ACATCTGGTTTCAACATGACACTAGCTAGATGTCCAATA-CA-CCAGTG-ATCAAC-AA
gi|24 : g--AGTTAGAATCATTCATCTATATAACACCTGGTTTCAACATG--------------TCCAATA-CA-
gi|25 : AA-TTT--AAC-TTC--TCTTGGTTATGCTT-TCTCT-TTATTGAAATAATAT-TTT
gi|3 : TAAT----ATAACTTGCATAAGTTCAAGTATTTCATATT----TTCCC--CATGC-TACAATAAA-TATTCTGGACAAAGATATACCGAA--TTTTTGTAAATAAATAA-AATTAATAATGATTTTTTTTTTTAGGGCAATTGTTTAGCATTGTTGTATTTTT-TGGGCC------ACAATA--TA--CAATG-TGAGTCA-A-AGACTTCAAGTTTGTATACTATGTACAGTAT-CGTAGT-CGCTCTGAA-GGT-AAATTTAATAGGC--AATTAAATCTGTG-TTAATTTGATTGATTTTTAACTATA--AGGCTATTTCCTTCAGT-AAGCGAC-TGAAAACTGTACAA-GAGAAAACCCAGAGCAGCTGAAAAATACATTGTTGGGAC-AA-TA-T-TTCTGGTATT-GTTGAAGCATATGATA------CTAGATAATG--GTTGTTTTTGACGTTTTTAATTTTCAAGCTCCATGATAGT--TGAA-TTTTAAAC--TTCTTCGTGGCTATGCTT-T-TCTGTTATTG----AATATATTTTGAT-G-AACGAAGAGGTGAATATGCTTCAATGTGTCG-------------TTTTTTGA-AATAT---TTTGC---AATTAGAATCAT-------TATAAACCCTGGTTTCAACATG--------------T-CAAT--CA--CAGTG--TCA---AATGC----GCAGG-AGAG-GGTTGACCAGGATAGCA-TTTTAAAAGAGCA-AATATCC
gi|3 : GATAGCATTT-----TAAA----A-GAGCAAA-TATCCATAGACAAGAT-GAAAA--TAG-TCATTCATTTATGTTATTGATC-TGTGGCATC-ATATGTAGTTATTGGGCAGAGGAA------CT-TTAAGTAA-TGGTTTTG-CATTG-CCCTTGAGA--TTTACATCGCTTTAGATTAGGTGCACATTCTTAAGTCATAGGTGCAACTTCTTAA--GTCATGGG-AAATTGGTAACTGGTA-------CT-AAACTTTTGTACTGCCCATTCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATACTT-CAGAAGGAACAGTGCTGGCTCATCTGTA---ACAAGCATATATACGTCAAATGAATCTTA--------------------ATACAGGGATAGATAATGAAACTCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGAGGGTGT------AAACATTTCAATATAACCCCCATGATGACCATCCCAAACAAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAA---T-AAACT----A-A------ATTTTTCAC-AAGAATTCAAAACTACAATAT-AACATATAAGA-TGTGGGTGTTTGAATGAATGTACGTACATGTACA-TTGTCTCTGATGGCATCAGGAGC--ATA-GTCCATA-TAGTTTACAAAC-AAAATTACACATATATTTA---TTTTTTAAAGAT-TAAAGGAGTTTTATatagacaagatgaaaatagtcattcatttatgttattgatctgtggcatcatatgtagttattgggcagaggaactttaagtaatggttttgcattgcccttgagatttacatcgctttagattaggtgcacattcttaagtcataggtgcaacttcttaagtcatgggaaattggtaactggtactaaacttttgtactgcccattcacatccgagtagttgaatgggcacattctcgtcataatagccaccaatacattgaatacttcagaaggaacagtgctggctcatctgtaacaagcatatatacgtcaaatgaatcttaatacagggatagataatgaaactctttaaaaagaaagggagtgggtgggttgaaacccaagtttatactatccacctaaaaagaggtgagggtgtaaacatttcaatataacccccatgatgaccatcccaaacaaagaggggtgccccttgttattctgtcattgtataatgaaagtggataaacatcaataaactaaatttttcacaagaattcaaaactacaatataacatataagatgtgggtgtttgaatgaatgtacgtacatgtacattgtctctgatggcatcaggagcatagtccatatagtttacaaacaaaattacacatatatttattttttaaagattaaaggagttttat
gi|4 : taatataacttgcataagttcaagtatttcatattttccccatgctacaataaatattctggacaaagatataccgaatttttgtaaataaataaaattaataatgatttttttttttagggcaattgtttagcattgttgtattttttgggccacaatatacaatgtgagtcaaagacttcaagtttgtatactatgtacagtatcgtagtcgctctgaaggtaaatttaataggcaattaaatctgtgttaatttgattgatttttaactataaggctatttccttcagtaagcgactgaaaactgtacaagagaaaacccagagcagctgaaaaatacattgttgggacaatatttctggtattgttgaagcatatgatactagataatggttgtttttgacgtttttaattttcaagctccatgatagttgaattttaaacttcttcgtggctatgcttttctgttattgaatatattttgatgaacgaagaggtgaatatgcttcaatgtgtcgttttttgaaatattttgcaattagaatcattataaaccctggtttcaacatgtcaatcacagtgtcaaatgcgcaggagagggttgaccagAAACTACAATATTAAC-TATAAGTATGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATAAGTCCATG-TAGTTTACAAAC-AAA-TTACAC--ATATTTAT--TTTTT-AAAGAT-T-AAGAAGCTTTGTAAAA--TG-TAGGATACAGTT-TAAA-TG--AA-TACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAG-GATACTGAA-CAACACATGCA-TAT-TATGATTAAAACATTTACATG-TTGATCAA------ATA-GGTATTAAG--AATTTGAATTAATTT-ATT-T--GGG-AACTCT---------AT----AAA------AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAAAAAT-A-TGT-A-TTACAAGTG-----------CTTAGGATTAATTATCAATCAGGAAGACTA-ACAAAAAGATGT-GACAA-AT-AGTTACTT-TGTA--TC------CCCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTC--TT-TACCAAAATGACATA-CTGGAAAGTTGGGTGAATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTATTTATCCTGAAATTGTAAGT-----G-AATA-TAT-TTA-------ATATCAATCGCCCAGTCGT-AGGTGTACATTGGTGGAGTTAAACTGCATCTCGGATTT-GATT-TTTAAAAATATAAGAACTATATATTTG-TTACCTGCATCT-ATAAATCCA----CTTCTTCCACTTGTGTGTTTGCCATCAAGTAAGGAATTTT-------TGCTGCCTT-T-AAGTTCTTT-TTCA-CGCTG-TTTTGTG-GCGT-AA-CC-A---------AATACACAACAAAGC-TGCATC-TTGGCAGCTGCCC-GGAAGTAGTAACTCGAA
gi|5 : tactttcaagaagatTGTAAAGCATCATAAAGCCGGCACCATTAGGG--AAATGATTGCATC---TCGAGACATAATAGAAT---TCTC-GCGAGAAGTATATGCAG-ATAAGTTTTTT-CATTATGC--T------TGAGAACATGTTCCAAATATGAATTATCTTGGCA--ATAGTATTTG---GTGAAGATTGTAGTTGATGT-ATGCAGT-TCTTTAA---AAG-CTTTTTTTCATGAAATTGTTATTCTGATTTTATTCTAGGGTATGGTTTAGAAGAATATAGCTGCATCTCATTGAGA--G-CTACAT---------TAATG---ATTATTGGGGCAT-AAG--TCAAGACGCAGC-TTTACGC-TCAGCAG-ACACCATTTCTTGT-GATTG-ATAAACCATTGAGGCATGGAAATGTTC--CATTCCATGGG-AATCTACA--TTTAATATGAATTCTTTTCTGTACAT--TCTG-AAT
gi|6 : tgtcgtgccccccgtccaacttcaaatcctggatccaccatcaaattttcagtattgggttattaacattcatttcT-AAACT----ACATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAATT-TGTGGGTGTTTTAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAACATATA-GTTCATG-TAGTTTACAAAC-AAAATTACAC--ATATCTAT--TTT-TTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACATAACA-TTC-TTTGT-AAAAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAA------ATA-GGTATTAAG--AATCTGAATTAATTTAATT-T--CGGAAACTCT---------ATAATAAAATTTT--AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---gt
gi|7 : TAAAATAATACTTGTATA-TATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATATAGT--ATCTCTGCCAGAAGTATATGCAATATAAGTTTATT-CATTATGCTAT-----ATGAGAACATGT-CCAAATATGAATTACCTTG-CA--ATAGTATT--TGAGTGAA----------GATGTCATGCAGTCTCTTT-----AAT-TTTTTTTTTTTTAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACAT---------TAATGATCATT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACA-CAATTtaat
gi|8 : gtccgacttcaaatcctggatccacccatcaaattttcaatattggttatGTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAAGGAAAATTATTGCATC-----------------AAT--GTCTCTGCCAGACGTATACGCAATATAAGTTTTTTTCAATATGC--T-----ATGAGAACGTGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTG--AATGAAGATTG-AATTGATGTCATGCAGTCTCTTTAA---AACATTTTTTTCCCTGAAATTGTTAT---G---TT----CAGGGTATGGCTTAGAGG-ATAT-GCTGCATCTCATCGAGA--GCCTACAT---------T-------ATT-----GGCATCAAG-TTAAA
gi|9 : cagcccatagaccctctgcctcacccccttcaacttcaaatcctggatccacccatcaaattttcaatattggttattaaaattcattctAATTGTTTA------------TTTG-TG--CC------ACAA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGT-AAATTTAATA--CCAAATTACATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTGAAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAAAC-ATTGT--GGACAAA-TA-A-TTCTG-TATT-GTGAAAG-----
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|26 ): CATAGTATCCACAAATACATTGACTTATTC
Alignments
lowQualScore : 11111111111111111
lowQualScore : 11 11 1111 11 11111111 222 111 1111 11 4444444444444444444444 1 1 1 1 1 1 1 2 1 1 11 1 2 33333 22 1 1 1 22 5555555 2 2 11 444444 1 2222 555555555555 1 11 1 222222 1111 1 1 1 1 1 1 1 1 1 1 11 1 1 1 11 1 1 1 1 1 1 111 1 11 2 1 1 1 1 1 999999999999999 2222 6666666666 1 11 11 1 1 1 1 11 6666666666666 11 222 2222222 44444444444444 11 1 33333 22 1 33 11 1 1 6666666666666666666 1 1 2222 2 1 1 333333333 1 2 11 22222222 1 1 11 1 555555555555555555555555 11 4444444444444 1 1 2 44444444 444 77777777777777 2222 111 3333333333333 66666666666 1 1 1 1 11 1 222222 11 1 3333333333 11 111 11 1 1 11 1 1 1 1 1 1 1 3333333 11 11 2222222 4444444 111 1 2222 1 11111 2222 1 66666666666 55555555555555 1 1 22222 11 22222 55555555555 1 11 00000000000000000 1 1 11 1111 1111 1 1111111 1111 11 55555555555555555 111
lowQualScore : 11 33 3 0 4444 333 1 3 11 0 1 3 6 66666666 6 6 99 555 999999 1 0 444 99 888 0 0 7777 0 8 8 11 2222222222222222222222 88 0 0 0 0 0 0 8 3 7 3 4 3 6 99 6 3 3 00000 00 6 5 5 5 00 3 3333333 0 6 7 3 6 88 000000 7 3 7 0 4444 111111111111 0 33 0 888888 4444 3 0 2 0 0 0 0 0 0 0 0 0 11 1 0 0 0 33 3 3 0 2 0 2 0 0 5 3 0 777 1 0 33 0 0 0 0 0 0 111111111111111 2222 7 7 7 7777777777 0 33 55 22 0 3 8 8 0 0 8 3 0 3 0 0 0 33 5555555555555 00 8 111 0 3333333 77777777777777 88 8 2 33 3 0 55555 7 00 7 3 11 3 44 5 5 1111111111111111111 0 3 3 8888 3 3 7 3 7 333333333 6 3 6 88 99999999 3 2 0 3 2 3 33 0 888888888888888888888888 8 11 8 2 0000000000000 0 0 3 3 88888888 444 0 7 44444444444444 7 7 8888 999 8888888888888 6 7 77 55555555555 3 3 3 7 3 11 0 222222 3 77 8 0 8 5555555555 8 0 0 99 88 8 0 8 0 11 111 0 0 8 8 33 0 999 0 33 3 3 0 0 0 0 0 7 0 3 0 8 1111111 11 0 0 0 8 11 0 0 6666666 6 5555555 8 8 444 3 0 99 9999 3 0 77777 0000 0 3 6 11111111111 1 44444444444444 9 0 3 6 0 55555 8 8 0 8 8 11 8 5 00000 0 8 00000000000 2 0 33 66666666666666666 0 0 3 3 66 0 0 8 11 7777 4444 1 1 5 1 22 8888888 5 1111 5 5 5 0 00 33 5 5 77777777777777777 3 5 7 5 3 5 000 5 0 1 0
lowQualScore : .. .. . . .... ... . . .. . . . . ........ . . .. ... ...... . . ... .. ... . . .... . . . .. ...................... .. . . . . . . . . . . . . . .. . . . ..... .. . . . . .. . ....... . . . . . .. ...... . . . . .... ............ . .. . ...... .... . . . . . . . . . . . . .. . . . . .. . . . . . . . . . . . ... . . .. . . . . . . ............... .... . . . .......... . .. .. .. . . . . . . . . . . . . . .. ............. .. . ... . ....... .............. .. . . .. . . ..... . .. . . .. . .. . . ................... . . . .... . . . . . ......... . . . .. ........ . . . . . . .. . ........................ . .. . . ............. . . . . ........ ... . . .............. . . .... ... ............. . . .. ........... . . . . . .. . ...... . .. . . . .......... . . . .. .. . . . . .. ... . . . . .. . ... . .. . . . . . . . . . . . . ....... .. . . . . .. . . ....... . ....... . . ... . . .. .... . . ..... .... . . . ........... . .............. . . . . . ..... . . . . . .. . . ..... . . ........... . . .. ................. . . . . .. . . . .. .... .... . . . . .. ....... . .... . . . . .. .. . . ................. . . . . . . ... . . . .
lowQualScore : 22 00 8 8 8888 000 0 2 00 8 7 5 7 88888888 7 7 22 333 222222 0 8 000 00 444 8 8 0000 8 0 0 00 6666666666666666666666 88 0 0 0 0 0 0 8 3 3 3 0 3 7 77 7 3 7 00000 77 7 0 0 5 77 7 7777777 7 7 3 7 7 33 333333 3 3 3 7 0000 222222222222 0 88 0 888888 8888 2 0 5 0 0 0 0 0 0 0 0 0 88 0 0 0 0 88 2 2 0 5 0 5 0 0 5 2 0 555 2 0 88 0 0 0 0 0 0 888888888888888 7777 3 3 3 3333333333 0 88 88 55 2 2 0 0 8 8 0 2 0 2 0 0 0 88 0000000000000 22 8 555 8 8888888 00000000000000 88 0 5 22 2 0 00000 3 00 3 3 33 7 00 0 5 0000000000000000000 7 3 3 3333 7 3 3 3 3 333333333 7 3 7 33 00000000 3 5 0 2 5 2 88 0 555555555555555555555555 8 00 0 5 8888888888888 0 0 2 7 33333333 000 7 3 00000000000000 3 3 3333 333 7777777777777 7 3 33 00000000000 3 3 3 3 3 00 0 222222 2 00 0 6 0 0000000000 0 8 8 44 88 0 8 0 8 00 888 8 8 0 0 22 0 000 0 88 2 2 0 0 0 0 0 0 0 2 0 0 0000000 00 8 8 8 0 00 8 8 0000000 0 2222222 0 0 888 2 0 55 5555 2 0 22222 8888 0 2 5 44444444444 0 55555555555555 2 0 2 5 0 00000 0 0 6 0 0 00 0 0 00000 8 0 22222222222 5 0 88 00000000000000000 0 0 2 2 66 8 8 0 66 0000 2222 0 7 7 4 00 6666666 4 6666 7 3 7 7 00 44 0 7 99999999999999999 1 0 4 0 4 7 000 7 1 0 2
consensus : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATG---A------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGAG-CATGGAAATGGTT-ACATCCCATGGGAA-NTACACTCTTAAT-TGAAT-CTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATTC-AT-TCTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-GT-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-ATTTT--AANAGCACAATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGAT-GACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG--AAAA--CT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATACTT-CAGAAGGAACAG--------CATCTGTA---ACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA----TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----CG-C---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
Reference ( family-4284 ) : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATG---A------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGAGGCATGGAAATGNTT-ACATCCCATGGGAAACTACACTCTTAAT-TGAATTCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAAGTATT--ATTTTTCCCCCATGCATGCAATAAAATATT-TGGACAAAGATATA--GAATTTTTGTG--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGAC-AATA-ATT-CTG-TA-TTGTG-AAAG---A-GACG------CTAGAATAT-GTGTGTTTTTGAAGTTTTTAATTTGCAAGCTCCATG--AGT---GTG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-ATTTTTAAAGAGCACAATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGATTGACAA-TTAG-TCATTCATTTATGC-ATTGATNCTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG--AAAAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAA-CTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATACTTTCAGAAGGAACAG--------CATCTGTA-TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--NGGTGT--GAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA----TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CC---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----CG-C---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|1 : AAATTATTGTATA---TCATAAAGCCC-CACCATTA--GGAAAATGATTGCATCATCTCGAGACATTGAAGTATGTATCTCTGCCAGAA-TATATGCAATATA-GTTT-----ATCATAC--TTCTATATGAGAACATTG-CCAAATATGAATTACCTTG-CATAATAGTATTTG-AAGGGAA-----------ATGTCATGCAGTCTCTTTAATTAAA-ATTCTTTT------AATGGTTCTTCTGATTCA----GAGGTTAGGGTT--AAAG-ATAT-GCTG--TCTCATTGAGGACGCCTACAT-AATG---AATTCCATT-----GTTATCAAGCTTCAAGAC-CACCATTTAC-CCTCA-CTGGACAC-ATTTCTTGTCGATTGAATAAACCATTGAG-CAGGGAAATAGTT-ACATCTCATGGGAAAGTACACTCTTAAT-TGAAT-CTTTT----GCATACTCTGCAATCTTAATA-ATCACAGA-TTGTTGATAATT-AGATAACTTCCATAAGTCCAATTATTCAATTTCTCACT-ATGCATGAAATAAAAGATTGTGGACAAAGATATA--GAAACTTT-TG--TAAATAA-A--TAATAATGGATTTTTTTTCC---CCAATTGTTTA------------TTGTGTG--CCCAC------AA-AAGTGATCAATGGTGAGTCAGACAGACTTCAAGTT-GTATA-TATGTACAGTTTTC-GAGTGC-CTCTGAAAGGTAAA-TTTAATAC--AATTACATCT-TGGTTGATT-G--TGATTT--AAACATATCAG-CTATTT-CTTCAGTCAGAGGACCTGAAAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAACA-TTAGT--GGACAAATACATT-CTG-TATTTGTGAAAAG---A-AACATATGATCTAGAATATGGTATGTTTTTGAAG-TTTTAATTTGCTAGCTCCATA--AATATAGTGAAATTT--AA-TTT-CTTCGTGGC-ATGCTTATCTCT-TTATTGAAATG--AT-TTTTGATTGAAACGAA-AGGTG-ATATG-TTCAA--TGTCGA------------TTTTTTGAATATATCTATTTGCG--AGTTAG-ATCAT------ATATAACACCTGGGTTCAACATG--------------TCCAATAACAACCAGTGCACAAACGAATGCCAAAGCAGGAAGA--GGTTGACC-GGATAG-ATTTTT-AATAGCAC-ATATCCCATGGCACCATTTGGTGCT-TACACAAGTGATAGC---CT-----ACA----A-ATGTGAAT-TCC-GTA----AGATTGACAAGTTAGCTCATTCA-TTATGC-ATTG--TCTGTGGCATCCAT-TGTAGTT-TTG--CAAAGGAAAAAAAATTATTAGGTAATTGGTTT--GCATTGATCCTTGAGGCTTTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTC-TAA--GTCATGGG-AAAATGGTCA-TGG------TACTAA-CTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGGCCACATTCTCGTCATAATAGC-CATCAAAACA-TGAATACTTTCAGAAGGAACAG--------CATCTGTATTAACAAGCATATATATGTCAAATGAATATCATCGTGAATATCATTATAGCAATACAGGGATAGATAATGAAAA--TTTAAAAAGAAAGGGAGTGCGTGGGTTGAAACCCA--TTTATACTATCCACCTAAAAAGAGGAGGTTGATGGGGTGT--AACAAATC-G-CAATATAA-CCCCATGATGACCATCCCAAA-GAAGAGGGGTGCCCCCCCGCCCCCCTTGGCTATTCAGTCATTGGGATAATTGAAAG-GGATAACACATCAATGTT-AAACTTTACA-ATTTTTCATTTTTAATCCAGAATTCAAAACTACAATAT-AAC-TATAATT-TGTTGGTGTTTTAATAA----------ATGTACATTTGTC-CTGATGG-ATCAGGAACATAT--GTTCATGTTAGTTTACAAACAAAAATTACAC--ATAATTCTTATTTTTTAAAGAT-T-AATGAACTTTGTAAAACATGATAGGATACGGTTCTAAACTGACAAATAC-GTGGTCAAAAGTATTTTCTTGACATAACAGTTCTTTTGTAAAAAGATACTGAA-CAACACATGCAATATCTATGATTAAAACATTACCATGTTTGATTAAAAGC----G-GTATTAAGA--ATCTGAA-TAAATTAATTATCAGGAAAACTCT-------ATAAATAAACATTTTAAAAAATGCAATGGCAGTTTCAGCGACCAAGAGAAATCACTGTAATTTACAAGTGCTTAGGAT----------TTAATTATCAATCAGGAAG-CTGAACAAAAAGA--T--ACAA-A--GA-TACTTGTATG-----------GCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTCATTTATCCC-ACAATGACATA-CTGGAAAGTTGG--G-ATGTATTG-----TTAGTTAATAAAATCTGTAGAAAACAAAAACCCTTTAATTGTCTTTATTA-CCTGAAATTGTAAGTGTTTCGAAATAGTAT-T--T------ATATCAATC-TCCAGTCGTAAG--GTACATTGGTGGCAGT--AACTGCT---TCTCGGGTTTAGATTCTTTAAAAATATAAGAACTAT-CATTTGTTAACCTGCATCTAATAAATCCA----CTTCTTTCATT----TATGTG-CATC-AG--AGGAATTTA-------TACTGGCTA-TAAAGTTCGTTATTTACCGCT--TTTTGT-AG-GTAAA-CCA-------------AATAC-CAACAAAGC-TGCATATTGAGCAGCTGCCC-GGAAGTAGTAAATCGAAAGT-GTGAAAAGATAAACGAAGATTAGG
gi|10 : acagcccatagaccccggttctgcctataatgtcgttggcccccccctcccgtcagtccgacttcaaatcctggaaatccaccatcaaatttcatattggtttttaT-GATT-TT---AAA-ATAAGAACTAT--ATTTGTTTACTTGCATCT-ATAA-TCCA----CTTTTTCCACT----TGTT-G-CATCAGGTAAGGAATTTA-------TGCT--CTCAC-AAGTTTGTT-TT-A-CCCTGCTTTTGTAAGCGTAAAGCCATA----TG-C---AA----CAACAAAGCTTGCA-CTTCGACAGCTGCCCGGGAAGTAG-AAATCGAAAGTGG---AAAG-T-AACGA-ACTTAagaccat
gi|11 : AACTAT-TAT--GTTTACCTGCATCT-ATCGA--CAAGGTTTTTTTTCTCT----TCTTAG-CATC-GGTTGGGAATCTAAATAAACTGC-AGCTC-T-GAGT-CG------A-CCCT---TTTATATGCGTACA-TGT-A----CA-CTCAAACGCAAAACAAAGC-GGCATTATTGTCTGCCGCCT-TGAAGTATTGA-CCGAAATT-G---AAAG-TAAACGAGATTTAGGcaga
gi|12 : TTG-CATC-AGTGAGGAATTTA-------TGCAGGCTA-C-AAGTTTGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----TG---------CACAACAAAGC-TGCATCGTTGACATCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAG
gi|13 : CT----TTTTTG-CATC-GAAAGGGAACATA-------TACAGGCTG-C-AGGTTTGTT-TTCA-TCTTG-TCATATGAGTGC-AA-CCGTA----GG-C---AA-----AACA--------ATCTTTGACGGCTGTCC-AGAAGCAGT-ATTTGAAAGT-G---AAAG-TGGACG
gi|14 : CCTGCATTCAGATTGACT-CACGT--ACC-G-CATG-CATAACTGGA----TGGATG-AAGTATTT-----TTAATC-AT-AACTC-AAGAAAAAT-CAAACCTTTTAACTA--TTCATTG-CCTAAAATTGTCA-T-----TAAAGA-TAT-T
gi|15 : GTGCAAGTCTATAATAATCATGGGGAAATTG-TCACTAGCA----T--TGAGCTCTTGTACTGCTCATTAATATCTTAGTAGCTGAATGGG-CACATTCCCATCATAGTATC-CACAAATACATTGA
gi|16 : act-TCTCT-TTATTGAAATCATAT-TTT-GG-TGAAAAGAA-AGGTG-ATATG-TTCAA--TGTCATTCCTTCAAATGTTTTTTTT-ATATATATATTTGCATTAGTTAGAATCAT------ATATAACACCTGGTTTCAAc
gi|17 : GTT-AT-AACTC-GTAGAAAAC-AAAACTCTTTAGCTG--TTTATTA-CCGGGAATTGTAAGT-----GAAATA-CAT-CT-T------ATTTCAATCGCCCAGTCGT-GA--GTACATTGG
gi|18 : AAAACATTTACATG-TTGATCAAATGTGCATGTGTATTAAAATAATTTTAATTAATTTAATT-T--GGGAA----C-------ATAAAAAA-----------AATGCAAT-GCAGTTTCAGCGACC-ag
gi|19 : AGAAGTATATGCAATATAAGTTTTTT-CATTCTGC--T-----ATGATAACATGT-CCAAATATAAATTATCTTG-CA--ATGGTATT--TGAGTGAAGATTGTAGTTGAT
gi|2 : GTAAAGAAATACTTGCATA-CATCATAAAGCC---ACCATTAAGGGAA--TGATTGCATC---TCGAGACTAAATAGAATGT--CTCTGCCAGAAGT-TATGCA-TATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-TA--ATAGTATTTGTGAGT-AAGATTGTAGTTGATGTCATGCATTCTTTTTAA---AA-CTTATTTTTTCTGAAATTGTTATTCTGATTTC----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTCCATTA-------------TT-----GATATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTTTTGT-GATTGAATAAACCATTGAG-CATGGAAATGATTCACATCC-ATGGGAA-TTACACTCTTAAT-TGAAT-CTTTT-TGT-CATA-TCTGCAAATCTAATACATTACAGACTTGT-GAGAATTCAGATAACTTCCATAAGTTCAAATATT-------TTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTT---A--TAA-TAATAATTAATAACGATTTTTTTTTTT---GCAATTGTTTA------------TTTT-TG--CC-ACTGTGACAA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAAATTTAATACCAAATTAAATCT-TG-GCAATT-G--TGATTTTTAAACTTATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGACA-CATA---CAGCTGAAAAATA-ATTGT--GGAC-AATA-ATTTCTG-TA-TTGTG-AAAG---------------CTAGAATAT-GT-TGTTTT-GAAGTTTT-AATTTGCAAGCTCCATA---------TG-AATGT--AACTTTTCTTCATGGCTATTCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTA-ATATATCTATTTGCA--AGTTAGAATCAT------ACATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATG-----ACAGCAAGAGAGGTTGTACAGGATAG-ATTTT---AAAGCACAATATCCCATAGCAC-ATTTGGTGCTATACACAAGTGATAGC---CTTTGTTGCATTTGACATTTGAGT-TTCTGTA----AGAT-GACAA-TTAG-TCATTCATTTATG---TT-ATGTTGTGGCATCCAT-TGTAGTTCTTG--CAGAGG--AAAA--CT-TTAG-TAA-TGGTTTTGGCATTGACCCTTGAGA--TTTAGATC-CTTTA----------G-ATT---------AAGGTTCAACTTCATAA--GTCATGGG-AAATTGGTCACTGGTAGTGGTACTAAACTTTTGTACTGCCTATCCACATCCGAGTAGTTGAATGGG-CACATTATCGTCATAATAGCGCATCAATACATTGAATACTT-CAGAAGGAACAG--------CATCTGTA---AGAAGCATATATATGTCAA-TGAATATCATC------------ATAGCAATAAAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTAGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--AGGTGTAAAAAAAAACAACCAATATAACCCCCATGATGACCATCCC-AACAAAGAGGGGTG------------CCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATATTAAAACC----A-ATTTTTCATTTTTAA--CAAAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGG-GCG-ATA-GCCCATG-TAGTTTAC-AAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGACAT-AAGAAGCTTTGTAACA-ATG-CAGGATACAG----AAA-TG--AAATACAGT-GTCAAAAGTATTTTC-AGACGTAACA-TTC-TTTGT-AAGGGATACTGAACCAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCACATG-----T-GTAGTAAGA--ATTTGAATT-ATTTAATT-T--GGGAAACTCTAAAAAAAAAAAAAAAA----AAAAAAAATGCAAT-GCACTTTCAACAA-C-AGAAAAAT-G-TGTAA-TTACAAGTGTGTAGGATTAATTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAACAA--T-GACAATTT-AA-T-TTTGTATGATTCACACAGTGCCCCCCCCCCCCCTTGCGTCCATAGTGACTT--CT---------AATTCCATA-CTGGAAAGTTGGGTG-ATGTTTTGTTATATTATTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAATTG--TTTATTA-TCTGAAATTGTAACT-----GAAATA-TATCTCATAAAGTCATATCAATCGCCCAGTCGT-AG--GTACATTAGTG--------------------CGGATTT-GATT-TTTAAAAATATAAGAACTAT-GAATTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-AGTAAGGAATTTA-------TGCTGGCTA-T-AAGTTCGTT-TTTA-CGCTG-TTTTGTGAGCGTAAT-CCA-AATACTGTT---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAATAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|20 : GTAA-TGGTTTTGGCATTGATCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTCTTAA--GTCATGGG-AAATTGGT
gi|21 : atgtaTCAGGAAAACTG-ACAAAAAGA--TAGACAA-ATAAA-TACTTATATG--
gi|22 : ---AATTCACAACAAAGC-TGCATCTTTGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGattcacacagtgcccctttcctgcct
gi|23 : ACATCTGGTTTCAACATGACACTAGCTAGATGTCCAAT-AC-ACCAGTG-ATCAAC-AA
gi|24 : g--AGTTAGAATCATTCATCTATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-A
gi|25 : -AATTT--AACTTC---TCTTGGTTATGCTT-TCTCT-TTATTGAAATAATAT-TTT
gi|3 : TAAT----ATAACTTGCATAAGTTCAAGTATTTCATATTTTCCCCATGC-TACAATAAA-TATTCTGGACAAAGATATACCGAATTTTTGTAAATAAATAA-AATTAATAATGATTTTTTTTTTTAGGGCAATTGTTTAGCATTGTTGTATTTTT-TGGGCC-AC------AATA--TA--CAATG-TGAGTCA-A-AGACTTCAAGTTTGTATACTATGTACAGTAT-CGTAGT-CGCTCTGAA-GGTAAA-TTTAATAGGCAATTAAATCTGTG-TTAATTTGATTGATTTTTAACTATA--AGGCTATTTCCTTCAGT-AAGCGAC-TG-AAAACTGTACAA-GAGAAAACCCAGAGCAGCTGAAAAATACATTGTTGGGAC-AATA-TTT-CTGGTA-TTGTT-GAAGCATATGATA------CTAGATAAT-GGTTGTTTTTGACGTTTTTAATTTTCAAGCTCCATGATAGT----TG-AATTTTAAAC-TT-CTTCGTGGCTATGCTT-T-TCTGTTATTG----AATATATTTTGA-TG-AACGAAGAGGTGAATATGCTTCAATGTGTCG-------------TTTTTTG-AAATAT---TTTGC---AATTAGAATCAT-------TATAAACCCTGGTTTCAACATG--------------T-CAAT--C-A-CAGTG--TCA---AATGC----GCAGG-AGAG-GGTTGACCAGGATAGCATTTTAAAAGAGCA-AATATCC
gi|3 : GATAGCATTTT-----AAA----A-GAGCAAATATCC-ATAGACAAGAT-GAAAA-T-AG-TCATTCATTTATGTTATTGAT-CTGTGGCATC-ATATGTAGTTATTGGGCAGAGG--AA----CT-TTAAGTAA-TGGTTTTG-CATTG-CCCTTGAGA--TTTACATCGCTTTAGATTAGGTGCACATTCTTAAGTCATAGGTGCAACTTCTTAA--GTCATGGG-AAATTGGTAACTGGTA------CTAAACTTTTGTACTGCCCATTCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATACTT-CAGAAGGAACAGTGCTGGCTCATCTGTA---ACAAGCATATATACGTCAAATGAATCTTA--------------------ATACAGGGATAGATAATGAAACTCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT----AAACAT-TTCAATATAACCCCCATGATGACCATCCCAAACAAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAA---T-AAACT----A-A------ATTTTTCAC-AAGAATTCAAAACTACAATAT-AACATATAAGA-TGTGGGTGTTTGAATGAATGTACGTACATGTACA-TTGTCTCTGATGGCATCAGGAGC--ATA-GTCCATA-TAGTTTACAAAC-AAAATTACACATATATTTA---TTTTTTAAAGAT-TAAAGGAGTTTTATatagacaagatgaaaatagtcattcatttatgttattgatctgtggcatcatatgtagttattgggcagaggaactttaagtaatggttttgcattgcccttgagatttacatcgctttagattaggtgcacattcttaagtcataggtgcaacttcttaagtcatgggaaattggtaactggtactaaacttttgtactgcccattcacatccgagtagttgaatgggcacattctcgtcataatagccaccaatacattgaatacttcagaaggaacagtgctggctcatctgtaacaagcatatatacgtcaaatgaatcttaatacagggatagataatgaaactctttaaaaagaaagggagtgggtgggttgaaacccaagtttatactatccacctaaaaagaggtgagggtgtaaacatttcaatataacccccatgatgaccatcccaaacaaagaggggtgccccttgttattctgtcattgtataatgaaagtggataaacatcaataaactaaatttttcacaagaattcaaaactacaatataacatataagatgtgggtgtttgaatgaatgtacgtacatgtacattgtctctgatggcatcaggagcatagtccatatagtttacaaacaaaattacacatatatttattttttaaagattaaaggagttttat
gi|4 : taatataacttgcataagttcaagtatttcatattttccccatgctacaataaatattctggacaaagatataccgaatttttgtaaataaataaaattaataatgatttttttttttagggcaattgtttagcattgttgtattttttgggccacaatatacaatgtgagtcaaagacttcaagtttgtatactatgtacagtatcgtagtcgctctgaaggtaaatttaataggcaattaaatctgtgttaatttgattgatttttaactataaggctatttccttcagtaagcgactgaaaactgtacaagagaaaacccagagcagctgaaaaatacattgttgggacaatatttctggtattgttgaagcatatgatactagataatggttgtttttgacgtttttaattttcaagctccatgatagttgaattttaaacttcttcgtggctatgcttttctgttattgaatatattttgatgaacgaagaggtgaatatgcttcaatgtgtcgttttttgaaatattttgcaattagaatcattataaaccctggtttcaacatgtcaatcacagtgtcaaatgcgcaggagagggttgaccagAAACTACAATATTAAC-TATAAGTATGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATAAGTCCATG-TAGTTTACAAAC-AAA-TTACAC--ATATTTAT--TTTTT-AAAGAT-T-AAGAAGCTTTGTAAAA--TG-TAGGATACAGTT-TAAA-TG--AA-TACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAG-GATACTGAA-CAACACATGCA-TAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATTTGAATTAATTT-ATT-T--GGG-AACTCT-------ATAAA----------AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAAAAAT-A-TGT-A-TTACAAGTG-----------CTTAGGATTAATTATCAATCAGGAAGACTA-ACAAAAAGATGT-GACAA-AT-AGTTACTT-TGTA--TC------CCCCCCCCCCCCCCCTTGCGTTCATAGTGTCTT--CTT-TACCAA-AATGACATA-CTGGAAAGTTGGGTGAATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTATTTATCCTGAAATTGTAAGT-----G-AATA-TAT-TTA-------ATATCAATCGCCCAGTCGT-AGGTGTACATTGGTGGA-GTTAAA---CTGCATCTCGGATTT-GATT-TTTAAAAATATAAGAACTATATATTTG-TTACCTGCATCT-ATAAATCCA----CTTCTTCCACTTGTGTGTTTGCCATCAAGTAAGGAATTTT-------TGCTGCCTT-T-AAGTTCTTT-TTCA-CGCTG-TTTTGTG-GCGT-AA-CCA-------------AATACACAACAAAGC-TGCATCTT-GGCAGCTGCCC-GGAAGTAGTAACTCGAA
gi|5 : tactttcaagaagatTGTAAAGCATCATAAAGCCGGCACCATTAGGG--AAATGATTGCATC---TCGAGACATAATAGAAT-T--CTC-GCGAGAAGTATATGCAG-ATAAGTTTTTT-CATTATGC--T------TGAGAACATGTTCCAAATATGAATTATCTTGGCA--ATAGTATTTG---GTGAAGATTGTAGTTGATGT-ATGCAGT-TCTTTAA---AA-GCTTTTTTTCATGAAATTGTTATTCTGATTTTATTCTAGGGTATGGTTTAGAAGAATATAGCTGCATCTCATTGAGA--G-CTACATTAATG---A------TTATTGGGGCAT-AAG--TCAAGACGCAGC-TTTACGC-TCAGCAG-ACACCATTTCTTGT-GATTG-ATAAACCATTGAGGCATGGAAATG-TT-CCATTCCATGGGAATCTACA--TTTAATATGAATTCTTTTCTGTACAT--TCTG-AAT
gi|6 : tgtcgtgccccccgtccaacttcaaatcctggatccaccatcaaattttcagtattgggttattaacattcatttcT-AAACT----ACATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAATT-TGTGGGTGTTTTAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAACATATA-GTTCATG-TAGTTTACAAAC-AAAATTACAC--ATATCTAT--TTT-TTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACATAACA-TTC-TTTGT-AAAAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATCTGAATTAATTTAATT-T--CGGAAACTCT-------ATAATAAAATT--TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---gt
gi|7 : TAAAATAATACTTGTATA-TATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATATAGTAT--CTCTGCCAGAAGTATATGCAATATAAGTTTATT-CATTATGCTAT-----ATGAGAACATGT-CCAAATATGAATTACCTTG-CA--ATAGTATT--TGAGTGAA----------GATGTCATGCAGTCTCTTT-----AA-TTTTTTTTTTTTTAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATGATCA------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACAATTtaat
gi|8 : gtccgacttcaaatcctggatccacccatcaaattttcaatattggttatGTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAAGGAAAATTATTGCATC-----------------AATGT--CTCTGCCAGACGTATACGCAATATAAGTTTTTTTCAATATGC--T-----ATGAGAACGTGT-CCAAATATGAATTATCTTG-CA--ATAGTATT--TGAATGAAGATTG-AATTGATGTCATGCAGTCTCTTTAA---AACATTTTTTTCCCTGAAATTGTTA---TG---TT----CAGGGTATGGCTTAGAGG-ATAT-GCTGCATCTCATCGAGA--GCCTACATT-------A------TT-----GGCATCAAG-TTAAA
gi|9 : cagcccatagaccctctgcctcacccccttcaacttcaaatcctggatccacccatcaaattttcaatattggttattaaaattcattctAATTGTTTA------------TTTG-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTACATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAAAC-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|26 ): CATAGTATCCACAAATACATTGACTTATTC
Alignments
lowQualScore : 11 11 1111 11 11111111 222 111 1111 11 4444444444444444444444 1 1 1 1 1 1 1 1 1 1 222 1 1 33333 22 1 1 1 22 55555555 1 2 11 333333 1 2222 555555555555 1 11 1 222222 1111 1 1 1 1 1 1 1 1 1 1 11 1 1 1 11 1 1 1 1 1 1 111 1 11 1 1 1 1 1 1 888888888888888 22222 555555555 1 11 11 1 1 1 1 11 6666666666666 11 222 2222222 44444444444444 11 1 33333 22 111 1 22 1 1 6666666666666666666 1 1 2222 1 1 1 22 1111 1 2 11 2222 1 1 11 1 555555555555555555555555 11 33333333 1 1 1 44444444 222 7777777777777777 2222 11 222 222 66666666666 1 1 1 1 11 1 222222 11 1 3333333333 11 111 11 1 1 11 1 1 1 1 1 1 1 3333333 11 11 2222222 4444444 111 1 2222 1 11111 2222 1 66666666666 55555555555555 1 1 22222 11 22222 55555555555 1 11 99999999999999999 1 1 11 1111 1111 1 1111111 1111 11 55555555555555555 111
lowQualScore : 11 33 3 0 4444 333 1 3 11 0 1 3 6 66666666 6 6 99 555 999999 1 0 444 99 888 0 0 7777 0 8 8 11 2222222222222222222222 88 0 0 0 0 0 0 8 3 7 3 2 3 6 777 6 3 3 00000 00 6 5 5 5 00 1 22222222 7 3 6 88 444444 7 3 7 0 4444 111111111111 0 33 0 888888 4444 3 0 2 0 0 0 0 0 0 0 0 0 11 1 0 0 0 33 3 3 0 2 0 2 0 0 5 3 0 777 1 0 33 5 0 0 0 0 0 111111111111111 11111 7 7 7 666666666 0 33 55 22 0 3 8 8 0 0 8 3 0 3 0 0 0 33 5555555555555 00 8 111 0 3333333 77777777777777 88 8 2 33 3 0 55555 7 00 7 777 4 00 5 5 1111111111111111111 0 3 3 8888 3 3 7 3 7 55 8888 6 3 6 88 8888 7 3 2 0 3 2 3 33 0 888888888888888888888888 8 11 8 2 77777777 7 0 0 3 3 88888888 333 0 7 1111111111111111 7 7 8888 88 555 999 6 7 77 55555555555 3 3 3 7 3 11 0 222222 3 77 8 0 8 5555555555 8 0 0 99 88 8 0 8 0 11 111 0 0 8 8 33 0 999 0 33 3 3 0 0 0 0 0 7 0 3 0 8 1111111 11 0 0 0 8 11 0 0 6666666 6 5555555 8 8 444 3 0 99 9999 3 0 77777 0000 0 3 6 11111111111 1 44444444444444 9 0 3 6 0 55555 8 8 0 8 8 11 8 5 00000 0 8 00000000000 2 0 33 66666666666666666 0 0 3 3 66 0 0 8 11 7777 4444 1 1 5 1 22 8888888 5 1111 5 5 5 0 00 33 5 5 77777777777777777 3 5 7 5 3 5 000 5 0 1 0
lowQualScore : .. .. . . .... ... . . .. . . . . ........ . . .. ... ...... . . ... .. ... . . .... . . . .. ...................... .. . . . . . . . . . . . . . ... . . . ..... .. . . . . .. . ........ . . . .. ...... . . . . .... ............ . .. . ...... .... . . . . . . . . . . . . .. . . . . .. . . . . . . . . . . . ... . . .. . . . . . . ............... ..... . . . ......... . .. .. .. . . . . . . . . . . . . . .. ............. .. . ... . ....... .............. .. . . .. . . ..... . .. . ... . .. . . ................... . . . .... . . . . . .. .... . . . .. .... . . . . . . . .. . ........................ . .. . . ........ . . . . . ........ ... . . ................ . . .... .. ... ... . . .. ........... . . . . . .. . ...... . .. . . . .......... . . . .. .. . . . . .. ... . . . . .. . ... . .. . . . . . . . . . . . . ....... .. . . . . .. . . ....... . ....... . . ... . . .. .... . . ..... .... . . . ........... . .............. . . . . . ..... . . . . . .. . . ..... . . ........... . . .. ................. . . . . .. . . . .. .... .... . . . . .. ....... . .... . . . . .. .. . . ................. . . . . . . ... . . . .
lowQualScore : 22 00 8 8 8888 000 0 2 00 8 7 5 7 88888888 7 7 22 333 222222 0 8 000 00 444 8 8 0000 8 0 0 00 6666666666666666666666 88 0 0 0 0 0 0 8 3 3 3 0 3 7 777 7 3 3 00000 77 7 0 0 5 77 0 77777777 3 3 7 33 000000 3 3 3 7 0000 222222222222 0 88 0 888888 8888 2 0 5 0 0 0 0 0 0 0 0 0 88 0 0 0 0 88 2 2 0 5 0 5 0 0 5 2 0 555 2 0 88 5 0 0 0 0 0 888888888888888 00000 3 3 3 777777777 0 88 88 55 2 2 0 0 8 8 0 2 0 2 0 0 0 88 0000000000000 22 8 555 8 8888888 00000000000000 88 0 5 22 2 0 00000 3 00 3 777 0 77 0 5 0000000000000000000 7 3 3 3333 3 3 3 3 3 33 3333 7 3 7 33 3333 3 3 5 0 2 5 2 88 0 555555555555555555555555 8 00 0 5 88888888 0 0 0 2 3 33333333 333 7 3 3333333333333333 3 3 3333 33 777 000 7 3 33 00000000000 3 3 3 3 3 00 0 222222 2 00 0 6 0 0000000000 0 8 8 44 88 0 8 0 8 00 888 8 8 0 0 22 0 000 0 88 2 2 0 0 0 0 0 0 0 2 0 0 0000000 00 8 8 8 0 00 8 8 0000000 0 2222222 0 0 888 2 0 55 5555 2 0 22222 8888 0 2 5 44444444444 0 55555555555555 2 0 2 5 0 00000 0 0 6 0 0 00 0 0 00000 8 0 22222222222 5 0 88 00000000000000000 0 0 2 2 66 8 8 0 66 0000 2222 0 7 7 4 00 6666666 4 6666 7 3 7 7 00 44 0 7 99999999999999999 1 0 4 0 4 7 000 7 1 0 2
consensus : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATG---A------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TTTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTTAA-AGCGC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA----TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----CG-C---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
Reference ( family-4284 ) : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATG---A------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TCTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTTAANAGCAC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA----TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----CG-C---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|1 : AAATTATTGTATA---TCATAAAGCCC-CACCATTA--GGAAAATGATTGCATCATCTCGAGACATTGAAGTATGTATCTCTGCCAGAA-TATATGCAATATA-GTTT-----ATCATAC--TTCTATATGAGAACATTG-CCAAATATGAATTACCTTG-CATAATAGTATTTG-AAGGGAA-----------ATGTCATGCAGTCTCTTTAATTAAA-ATTCTTTT------AATGGTTCTTCTGATTCA----GAGGTTAGGGTT--AAAG-ATAT-GCTG--TCTCATTGAGGACGCCTACAT-AATG---AATTCCATT-----GTTATCAAGCTTCAAGAC-CACCATTTAC-CCTCA-CTGGACAC-ATTTCTTGTCGATTGAATAAACCATTGA-GCAGGGAAATAGTT-ACATCTCATGGGAA-AGTACACTCTTAAT-TGAA-TCTTTT----GCATACTCTGCAATCTTAATA-ATCACAGA-TTGTTGATAATT-AGATAACTTCCATAAGTCCAATTATT-CAAT-TTCTCACTATGCATGAAATAAAAGATTGTGGACAAAGATATA--GAAACTTT-TG--TAAATAA-A--TAATAATGGATTTTTTTTCC---CCAATTGTTTA------------TTGTGTG--CCCAC------AA-AAGTGATCAATGGTGAGTCAGACAGACTTCAAGTT-GTATA-TATGTACAGTTTTC-GAGTGC-CTCTGAAAGGTAAA-TTTAATAC--AATTACATCT-TGGTTGATT-G--TGATTT--AAACATATCAG-CTATTT-CTTCAGTCAGAGGACCTGAAAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAACA-TTAGT--GGACAAATACATT-CTG-TATTTGTGAAAAG---A-AACATATGATCTAGAATATGG-TATGTTTTTGAAG-TTTTAATTTGCTAGCTCCATA--AATATAGTGAAATTT--AA-TTT-CTTCGTGGC-ATGCTTATCTCT-TTATTGAAATG--AT-TTTTGATTGAAACGAA-AGGTG-ATATG-TTCAA--TGTCGA------------TTTTTTGAATATATCTATTTGCG--AGTTAG-ATCAT------ATATAACACCTGGGTTCAACATG--------------TCCAATAACAACCAGTGCACAAACGAATGCCAAAGCAGGAAGA--GGTTGACC-GGATAG-ATTTTTAATAGCAC--ATATCCCATGGCACCATTTGGTGCT-TACACAAGTGATAGC---CT-----ACA----A-ATGTGAAT-TCC-GTA----AGATTGACAAGTTAGCTCATTCA-TTATGC-ATTG-T-CTGTGGCATCCAT-TGTAGTT-TTG--CAAAGGAAAAAAAATTATTAGGTAATTGGTTT--GCATTGATCCTTGAGGCTTTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTC-TAA--GTCATGGG-AAAATGGTCA-TGG------TACT-AACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGGCCACATTCTCGTCATAATAGC-CATCAAAACA-TGAATACTTTCAGAAGGAACAG--------CATCTGTATTAACAAGCATATATATGTCAAATGAATATCATCGTGAATATCATTATAGCAATACAGGGATAGATAATGAAAA--TTTAAAAAGAAAGGGAGTGCGTGGGTTGAAACCCA--TTTATACTATCCACCTAAAAAGAGGAGGTTGATGGGGTGT--AACAAATC-G-CAATATAA-CCCCATGATGACCATCCCAAA-GAAGAGGGGTGCCCCCCCGCCCCCCTTGGCTATTCAGTCATTGGGATAATTGAAAG-GGATAACACATCAATGTT-AAACTTTACA-ATTTTTCATTTTTAATCCAGAATTCAAAACTACAATAT-AAC-TATAATT-TGTTGGTGTTTTAATAA----------ATGTACATTTGTC-CTGATGG-ATCAGGAACATAT--GTTCATGTTAGTTTACAAACAAAAATTACAC--ATAATTCTTATTTTTTAAAGAT-T-AATGAACTTTGTAAAACATGATAGGATACGGTTCTAAACTGACAAATAC-GTGGTCAAAAGTATTTTCTTGACATAACAGTTCTTTTGTAAAAAGATACTGAA-CAACACATGCAATATCTATGATTAAAACATTACCATGTTTGATTAAAAGC----G-GTATTAAGA--ATCTGAA-TAAATTAATTATCAGGAAAACTCT-------ATAAATAAACATTTTAAAAAATGCAATGGCAGTTTCAGCGACCAAGAGAAATCACTGTAATTTACAAGTGCTTAGGAT----------TTAATTATCAATCAGGAAG-CTGAACAAAAAGA--T--ACAA-A--GA-TACTTGTATG-----------GCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTCATTTATCCC-ACAATGACATA-CTGGAAAGTTGG--G-ATGTATTG-----TTAGTTAATAAAATCTGTAGAAAACAAAAACCCTTTAATTGTCTTTATTA-CCTGAAATTGTAAGTGTTTCGAAATAGTAT-T--T------ATATCAATC-TCCAGTCGTAAG--GTACATTGGTGGCAGT--AACTGCT---TCTCGGGTTTAGATTCTTTAAAAATATAAGAACTAT-CATTTGTTAACCTGCATCTAATAAATCCA----CTTCTTTCATT----TATGTG-CATC-AG--AGGAATTTA-------TACTGGCTA-TAAAGTTCGTTATTTACCGCT--TTTTGT-AG-GTAAA-CCA-------------AATAC-CAACAAAGC-TGCATATTGAGCAGCTGCCC-GGAAGTAGTAAATCGAAAGT-GTGAAAAGATAAACGAAGATTAGG
gi|10 : acagcccatagaccccggttctgcctataatgtcgttggcccccccctcccgtcagtccgacttcaaatcctggaaatccaccatcaaatttcatattggtttttaT-GATT-TT---AAA-ATAAGAACTAT--ATTTGTTTACTTGCATCT-ATAA-TCCA----CTTTTTCCACT----TGTT-G-CATCAGGTAAGGAATTTA-------TGCT--CTCAC-AAGTTTGTT-TT-A-CCCTGCTTTTGTAAGCGTAAAGCCATA----TG-C---AA----CAACAAAGCTTGCA-CTTCGACAGCTGCCCGGGAAGTAG-AAATCGAAAGTGG---AAAG-T-AACGA-ACTTAagaccat
gi|11 : AACTAT-TAT--GTTTACCTGCATCT-ATCGA--CAAGGTTTTTTTTCTCT----TCTTAG-CATC-GGTTGGGAATCTAAATAAACTGC-AGCTC-T-GAGT-CG------A-CCCT---TTTATATGCGTACA-TGT-A----CA-CTCAAACGCAAAACAAAGC-GGCATTATTGTCTGCCGCCT-TGAAGTATTGA-CCGAAATT-G---AAAG-TAAACGAGATTTAGGcaga
gi|12 : TTG-CATC-AGTGAGGAATTTA-------TGCAGGCTA-C-AAGTTTGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----TG---------CACAACAAAGC-TGCATCGTTGACATCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAG
gi|13 : CT----TTTTTG-CATC-GAAAGGGAACATA-------TACAGGCTG-C-AGGTTTGTT-TTCA-TCTTG-TCATATGAGTGC-AA-CCGTA----GG-C---AA-----AACA--------ATCTTTGACGGCTGTCC-AGAAGCAGT-ATTTGAAAGT-G---AAAG-TGGACG
gi|14 : CCTGCATTCAGATTGACT-CACGT--ACC-G-CATG-CATAACTGGA----TGGATG-AAGTATTT-----TTAATC-AT-AACTC-AAGAAAAAT-CAAACCTTTTAACTA--TTCATTG-CCTAAAATTGTCA-T-----TAAAGA-TAT-T
gi|15 : GTGCAAGTCTATAATAATCATGGGGAAATTG-TCACTAGCA----T--TGAGCTCTTGTACTGCTCATTAATATCTTAGTAGCTGAATGGG-CACATTCCCATCATAGTATC-CACAAATACATTGA
gi|16 : act-TCTCT-TTATTGAAATCATAT-TTT-GG-TGAAAAGAA-AGGTG-ATATG-TTCAA--TGTCATTCCTTCAAATGTTTTTTTT-ATATATATATTTGCATTAGTTAGAATCAT------ATATAACACCTGGTTTCAAc
gi|17 : GTT-AT-AACTC-GTAGAAAAC-AAAACTCTTTAGCTG--TTTATTA-CCGGGAATTGTAAGT-----GAAATA-CAT-CT-T------ATTTCAATCGCCCAGTCGT-GA--GTACATTGG
gi|18 : AAAACATTTACATG-TTGATCAAATGTGCATGTGTATTAAAATAATTTTAATTAATTTAATT-T--GGGAA----C-------ATAAAAAA-----------AATGCAAT-GCAGTTTCAGCGACC-ag
gi|19 : AGAAGTATATGCAATATAAGTTTTTT-CATTCTGC--T-----ATGATAACATGT-CCAAATATAAATTATCTTG-CA--ATGGTATT--TGAGTGAAGATTGTAGTTGAT
gi|2 : GTAAAGAAATACTTGCATA-CATCATAAAGCC---ACCATTAAGGGAA--TGATTGCATC---TCGAGACTAAATAGAATGT--CTCTGCCAGAAGT-TATGCA-TATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-TA--ATAGTATTTGTGAGT-AAGATTGTAGTTGATGTCATGCATTCTTTTTAA---AA-CTTATTTTTTCTGAAATTGTTATTCTGATTTC----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTCCATTA-------------TT-----GATATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTTTTGT-GATTGAATAAACCATTGA-GCATGGAAATGATTCACATCC-ATGGGAA-T-TACACTCTTAAT-TGAA-TCTTTT-TGT-CATA-TCTGCAAATCTAATACATTACAGACTTGT-GAGAATTCAGATAACTTCCATAAGTTCAAATATT--------TTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTT---A--TAA-TAATAATTAATAACGATTTTTTTTTTT---GCAATTGTTTA------------TTTT-TG--CC-ACTGTGACAA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAAATTTAATACCAAATTAAATCT-TG-GCAATT-G--TGATTTTTAAACTTATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGACA-CATA---CAGCTGAAAAATA-ATTGT--GGACAA-TA-ATTTCTG-TA-TTGTG-AAAG---------------CTAGAATAT-G-T-TGTTTT-GAAGTTTT-AATTTGCAAGCTCCATA---------TG-AATGT--AACTTTTCTTCATGGCTATTCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTA-ATATATCTATTTGCA--AGTTAGAATCAT------ACATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATG-----ACAGCAAGAGAGGTTGTACAGGATAG-A-TTTTAA-AGCAC-AATATCCCATAGCAC-ATTTGGTGCTATACACAAGTGATAGC---CTTTGTTGCATTTGACATTTGAGT-TTCTGTA----AGA-TGACAA-TTAG-TCATTCATTTATG---TT-ATGTTGTGGCATCCAT-TGTAGTTCTTG--CAGAGG----AAAACT-TTAG-TAA-TGGTTTTGGCATTGACCCTTGAGA--TTTAGATC-CTTTA----------G-ATT---------AAGGTTCAACTTCATAA--GTCATGGG-AAATTGGTCACTGGTAGTGGTACTAAACTTTTGTACTGCCTATCCACATCCGAGTAGTTGAATGGG-CACATTATCGTCATAATAGCGCATCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAAGAAGCATATATATGTCAA-TGAATATCATC------------ATAGCAATAAAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTAGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--AGGTGTAAAAAAAAACAACCAATATAACCCCCATGATGACCATCCC-AACAAAGAGGGGTG------------CCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATATTAAAACC----A-ATTTTTCATTTTTAA--CAAAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGG-GCG-ATA-GCCCATG-TAGTTTAC-AAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGACAT-AAGAAGCTTTGTAACA-ATG-CAGGATACAG----AAA-TG--AAATACAGT-GTCAAAAGTATTTTC-AGACGTAACA-TTC-TTTGT-AAGGGATACTGAACCAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCACATG-----T-GTAGTAAGA--ATTTGAATT-ATTTAATT-T--GGGAAACTCTAAAAAAAAAAAAAAAA----AAAAAAAATGCAAT-GCACTTTCAACAA-C-AGAAAAAT-G-TGTAA-TTACAAGTGTGTAGGATTAATTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAACAA--T-GACAATTT-AA-T-TTTGTATGATTCACACAGTGCCCCCCCCCCCCCTTGCGTCCATAGTGACTT--CT---------AATTCCATA-CTGGAAAGTTGGGTG-ATGTTTTGTTATATTATTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAATTG--TTTATTA-TCTGAAATTGTAACT-----GAAATA-TATCTCATAAAGTCATATCAATCGCCCAGTCGT-AG--GTACATTAGTG--------------------CGGATTT-GATT-TTTAAAAATATAAGAACTAT-GAATTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-AGTAAGGAATTTA-------TGCTGGCTA-T-AAGTTCGTT-TTTA-CGCTG-TTTTGTGAGCGTAAT-CCA-AATACTGTT---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAATAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|20 : GTAA-TGGTTTTGGCATTGATCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTCTTAA--GTCATGGG-AAATTGGT
gi|21 : atgtaTCAGGAAAACTG-ACAAAAAGA--TAGACAA-ATAAA-TACTTATATG--
gi|22 : ---AATTCACAACAAAGC-TGCATCTTTGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGattcacacagtgcccctttcctgcct
gi|23 : ACATCTGGTTTCAACATGACACTAGCTAGATGTCCAAT-AC-ACCAGTG-ATCAAC-AA
gi|24 : g--AGTTAGAATCATTCATCTATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-A
gi|25 : -AATTT--AACTTC---TCTTGGTTATGCTT-TCTCT-TTATTGAAATAATAT-TTT
gi|3 : TAAT----ATAACTTGCATAAGTTCAAGTATTTCA-TATTTTCCCCATGC-TACAATAAA-TATTCTGGACAAAGATATACCGAATTTTTGTAAATAAATAA-AATTAATAATGATTTTTTTTTTTAGGGCAATTGTTTAGCATTGTTGTATTTTT-TGGGCC-AC------AATA--TA--CAATG-TGAGTCA-A-AGACTTCAAGTTTGTATACTATGTACAGTAT-CGTAGT-CGCTCTGAA-GGTAAA-TTTAATAGGCAATTAAATCTGTG-TTAATTTGATTGATTTTTAACTATA--AGGCTATTTCCTTCAGT-AAGCGAC-TG-AAAACTGTACAA-GAGAAAACCCAGAGCAGCTGAAAAATACATTGTTGGGACAA-TA-TTT-CTGGTA-TTGTT-GAAGCATATGATA------CTAGATAAT-GGT-TGTTTTTGACGTTTTTAATTTTCAAGCTCCATGATAGT----TG-AATTTTAAAC-TT-CTTCGTGGCTATGCTT-T-TCTGTTATTG----AATATATTTTGA-TG-AACGAAGAGGTGAATATGCTTCAATGTGTCG-------------TTTTTTG-AAATAT---TTTGC---AATTAGAATCAT-------TATAAACCCTGGTTTCAACATG--------------T-CAAT--C-A-CAGTG--TCA---AATGC----GCAGG-AGAG-GGTTGACCAGGATAGCA-TTTTAAAAGAGCAAATATCC
gi|3 : GATAGCATTTT-----AAA----A-GAGCAAATATCC-ATAGACAAGA-TGAAAA-T-AG-TCATTCATTTATGTTATTGAT-CTGTGGCATC-ATATGTAGTTATTGGGCAGAGG----AA--CT-TTAAGTAA-TGGTTTTG-CATTG-CCCTTGAGA--TTTACATCGCTTTAGATTAGGTGCACATTCTTAAGTCATAGGTGCAACTTCTTAA--GTCATGGG-AAATTGGTAACTGGTA------CTAAACTTTTGTACTGCCCATTCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAGTGCTGGCTCATCTG---TAACAAGCATATATACGTCAAATGAATCT--------------------TAATACAGGGATAGATAATGAAACTCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT----AAACAT-TTCAATATAACCCCCATGATGACCATCCCAAACAAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAA---T-AAACT----A-A------ATTTTTCAC-AAGAATTCAAAACTACAATAT-AACATATAAGA-TGTGGGTGTTTGAATGAATGTACGTACATGTACA-TTGTCTCTGATGGCATCAGGAGC--ATA-GTCCATA-TAGTTTACAAAC-AAAATTACACATATATTTA---TTTTTTAAAGAT-TAAAGGAGTTTTATatagacaagatgaaaatagtcattcatttatgttattgatctgtggcatcatatgtagttattgggcagaggaactttaagtaatggttttgcattgcccttgagatttacatcgctttagattaggtgcacattcttaagtcataggtgcaacttcttaagtcatgggaaattggtaactggtactaaacttttgtactgcccattcacatccgagtagttgaatgggcacattctcgtcataatagccaccaatacattgaatacttcagaaggaacagtgctggctcatctgtaacaagcatatatacgtcaaatgaatcttaatacagggatagataatgaaactctttaaaaagaaagggagtgggtgggttgaaacccaagtttatactatccacctaaaaagaggtgagggtgtaaacatttcaatataacccccatgatgaccatcccaaacaaagaggggtgccccttgttattctgtcattgtataatgaaagtggataaacatcaataaactaaatttttcacaagaattcaaaactacaatataacatataagatgtgggtgtttgaatgaatgtacgtacatgtacattgtctctgatggcatcaggagcatagtccatatagtttacaaacaaaattacacatatatttattttttaaagattaaaggagttttat
gi|4 : taatataacttgcataagttcaagtatttcatattttccccatgctacaataaatattctggacaaagatataccgaatttttgtaaataaataaaattaataatgatttttttttttagggcaattgtttagcattgttgtattttttgggccacaatatacaatgtgagtcaaagacttcaagtttgtatactatgtacagtatcgtagtcgctctgaaggtaaatttaataggcaattaaatctgtgttaatttgattgatttttaactataaggctatttccttcagtaagcgactgaaaactgtacaagagaaaacccagagcagctgaaaaatacattgttgggacaatatttctggtattgttgaagcatatgatactagataatggttgtttttgacgtttttaattttcaagctccatgatagttgaattttaaacttcttcgtggctatgcttttctgttattgaatatattttgatgaacgaagaggtgaatatgcttcaatgtgtcgttttttgaaatattttgcaattagaatcattataaaccctggtttcaacatgtcaatcacagtgtcaaatgcgcaggagagggttgaccagAAACTACAATATTAAC-TATAAGTATGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATAAGTCCATG-TAGTTTACAAAC-AAA-TTACAC--ATATTTAT--TTTTT-AAAGAT-T-AAGAAGCTTTGTAAAA--TG-TAGGATACAGTT-TAAA-TG--AA-TACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAG-GATACTGAA-CAACACATGCA-TAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATTTGAATTAATTT-ATT-T--GGG-AACTCT-------ATAAA----------AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAAAAAT-A-TGT-A-TTACAAGTG-----------CTTAGGATTAATTATCAATCAGGAAGACTA-ACAAAAAGATGT-GACAA-AT-AGTTACTT-TGTA--TC------CCCCCCCCCCCCCCCTTGCGTTCATAGTGTCTT--CTT-TACCAA-AATGACATA-CTGGAAAGTTGGGTGAATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTATTTATCCTGAAATTGTAAGT-----G-AATA-TAT-TTA-------ATATCAATCGCCCAGTCGT-AGGTGTACATTGGTGGA-GTTAAA---CTGCATCTCGGATTT-GATT-TTTAAAAATATAAGAACTATATATTTG-TTACCTGCATCT-ATAAATCCA----CTTCTTCCACTTGTGTGTTTGCCATCAAGTAAGGAATTTT-------TGCTGCCTT-T-AAGTTCTTT-TTCA-CGCTG-TTTTGTG-GCGT-AA-CCA-------------AATACACAACAAAGC-TGCATCTT-GGCAGCTGCCC-GGAAGTAGTAACTCGAA
gi|5 : tactttcaagaagatTGTAAAGCATCATAAAGCCGGCACCATTAGGG--AAATGATTGCATC---TCGAGACATAATAGAAT-T--CTC-GCGAGAAGTATATGCAG-ATAAGTTTTTT-CATTATGC--T------TGAGAACATGTTCCAAATATGAATTATCTTGGCA--ATAGTATTTG---GTGAAGATTGTAGTTGATGT-ATGCAGT-TCTTTAA---AA-GCTTTTTTTCATGAAATTGTTATTCTGATTTTATTCTAGGGTATGGTTTAGAAGAATATAGCTGCATCTCATTGAGA--G-CTACATTAATG---A------TTATTGGGGCAT-AAG--TCAAGACGCAGC-TTTACGC-TCAGCAG-ACACCATTTCTTGT-GATTG-ATAAACCATTGAGGCATGGAAAT-GTT-CCATTCCATGGGAATC-TACA--TTTAATATGAATTCTTTTCTGTACAT--TCTG-AAT
gi|6 : tgtcgtgccccccgtccaacttcaaatcctggatccaccatcaaattttcagtattgggttattaacattcatttcT-AAACT----ACATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAATT-TGTGGGTGTTTTAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAACATATA-GTTCATG-TAGTTTACAAAC-AAAATTACAC--ATATCTAT--TTT-TTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACATAACA-TTC-TTTGT-AAAAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATCTGAATTAATTTAATT-T--CGGAAACTCT-------ATAATAAAATT--TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---gt
gi|7 : TAAAATAATACTTGTATA-TATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATATAGTAT--CTCTGCCAGAAGTATATGCAATATAAGTTTATT-CATTATGCTAT-----ATGAGAACATGT-CCAAATATGAATTACCTTG-CA--ATAGTATT--TGAGTGAA----------GATGTCATGCAGTCTCTTT-----AA-TTTTTTTTTTTTTAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATGATCA------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACAATTtaat
gi|8 : gtccgacttcaaatcctggatccacccatcaaattttcaatattggttatGTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAAGGAAAATTATTGCATC-----------------AATGT--CTCTGCCAGACGTATACGCAATATAAGTTTTTTTCAATATGC--T-----ATGAGAACGTGT-CCAAATATGAATTATCTTG-CA--ATAGTATT--TGAATGAAGATTG-AATTGATGTCATGCAGTCTCTTTAA---AACATTTTTTTCCCTGAAATTGTTA---TG---TT----CAGGGTATGGCTTAGAGG-ATAT-GCTGCATCTCATCGAGA--GCCTACATT-------A------TT-----GGCATCAAG-TTAAA
gi|9 : cagcccatagaccctctgcctcacccccttcaacttcaaatcctggatccacccatcaaattttcaatattggttattaaaattcattctAATTGTTTA------------TTTG-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTACATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAAAC-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|26 ): CATAGTATCCACAAATACATTGACTTATTC
Alignments
lowQualScore : 11 11 1111 11 11111111 222 111 1111 11 4444444444444444444444 1 1 1 1 1 1 1 1 1 1 222 1 1 33333 22 1 1 1 22 444444 1 2 11 333333 1 2222 555555555555 1 11 1 222222 1111 1 1 1 1 1 1 1 1 1 1 11 1 1 1 11 1 1 1 1 1 1 111 1 11 1 1 1 1 1 1 888888888888888 22222 555555555 1 11 11 1 1 1 1 11 6666666666666 11 222 2222222 44444444444444 11 1 33333 22 111 1 1 22 1 1 6666666666666666666 1 1 2222 1 1 1 22 1111 1 2 11 2222 1 1 11 1 555555555555555555555555 11 33333333 1 1 1 44444444 222 7777777777777777 2222 11 222 222 66666666666 1 1 1 1 11 1 222222 11 1 3333333333 11 111 11 1 1 11 1 1 1 1 1 1 1 3333333 11 11 2222222 4444444 111 1 2222 1 11111 2222 1 66666666666 55555555555555 1 1 22222 11 22222 55555555555 1 11 99999999999999999 1 1 11 1111 1111 1 1111111 1111 11 55555555555555555 111
lowQualScore : 11 33 3 0 4444 333 1 3 11 0 1 3 6 66666666 6 6 99 555 999999 1 0 444 99 888 0 0 7777 0 8 8 11 2222222222222222222222 88 0 0 0 0 0 0 8 3 7 3 2 3 6 777 6 3 3 00000 00 6 5 5 5 00 1 444444 7 3 6 88 444444 7 3 7 0 4444 111111111111 0 33 0 888888 4444 3 0 2 0 0 0 0 0 0 0 0 0 11 1 0 0 0 33 3 3 0 2 0 2 0 0 5 3 0 777 1 0 33 5 0 0 0 0 0 111111111111111 11111 7 7 7 666666666 0 33 55 22 0 3 8 8 0 0 8 3 0 3 0 0 0 33 5555555555555 00 8 111 0 3333333 77777777777777 88 8 2 33 3 0 55555 7 00 7 777 3 3 0 00 5 5 1111111111111111111 0 3 3 8888 3 3 7 3 7 55 8888 6 3 6 88 8888 7 3 2 0 3 2 3 33 0 888888888888888888888888 8 11 8 2 77777777 7 0 0 3 3 88888888 333 0 7 1111111111111111 7 7 8888 88 555 999 6 7 77 55555555555 3 3 3 7 3 11 0 222222 3 77 8 0 8 5555555555 8 0 0 99 88 8 0 8 0 11 111 0 0 8 8 33 0 999 0 33 3 3 0 0 0 0 0 7 0 3 0 8 1111111 11 0 0 0 8 11 0 0 6666666 6 5555555 8 8 444 3 0 99 9999 3 0 77777 0000 0 3 6 11111111111 1 44444444444444 9 0 3 6 0 55555 8 8 0 8 8 11 8 5 00000 0 8 00000000000 2 0 33 66666666666666666 0 0 3 3 66 0 0 8 11 7777 4444 1 1 5 1 22 8888888 5 1111 5 5 5 0 00 33 5 5 77777777777777777 3 5 7 5 3 5 000 5 0 1 0
lowQualScore : .. .. . . .... ... . . .. . . . . ........ . . .. ... ...... . . ... .. ... . . .... . . . .. ...................... .. . . . . . . . . . . . . . ... . . . ..... .. . . . . .. . ...... . . . .. ...... . . . . .... ............ . .. . ...... .... . . . . . . . . . . . . .. . . . . .. . . . . . . . . . . . ... . . .. . . . . . . ............... ..... . . . ......... . .. .. .. . . . . . . . . . . . . . .. ............. .. . ... . ....... .............. .. . . .. . . ..... . .. . ... . . . .. . . ................... . . . .... . . . . . .. .... . . . .. .... . . . . . . . .. . ........................ . .. . . ........ . . . . . ........ ... . . ................ . . .... .. ... ... . . .. ........... . . . . . .. . ...... . .. . . . .......... . . . .. .. . . . . .. ... . . . . .. . ... . .. . . . . . . . . . . . . ....... .. . . . . .. . . ....... . ....... . . ... . . .. .... . . ..... .... . . . ........... . .............. . . . . . ..... . . . . . .. . . ..... . . ........... . . .. ................. . . . . .. . . . .. .... .... . . . . .. ....... . .... . . . . .. .. . . ................. . . . . . . ... . . . .
lowQualScore : 22 00 8 8 8888 000 0 2 00 8 7 5 7 88888888 7 7 22 333 222222 0 8 000 00 444 8 8 0000 8 0 0 00 6666666666666666666666 88 0 0 0 0 0 0 8 3 3 3 0 3 7 777 7 3 3 00000 77 7 0 0 5 77 0 777777 3 3 7 33 000000 3 3 3 7 0000 222222222222 0 88 0 888888 8888 2 0 5 0 0 0 0 0 0 0 0 0 88 0 0 0 0 88 2 2 0 5 0 5 0 0 5 2 0 555 2 0 88 5 0 0 0 0 0 888888888888888 00000 3 3 3 777777777 0 88 88 55 2 2 0 0 8 8 0 2 0 2 0 0 0 88 0000000000000 22 8 555 8 8888888 00000000000000 88 0 5 22 2 0 00000 3 00 3 777 3 3 7 77 0 5 0000000000000000000 7 3 3 3333 3 3 3 3 3 33 3333 7 3 7 33 3333 3 3 5 0 2 5 2 88 0 555555555555555555555555 8 00 0 5 88888888 0 0 0 2 3 33333333 333 7 3 3333333333333333 3 3 3333 33 777 000 7 3 33 00000000000 3 3 3 3 3 00 0 222222 2 00 0 6 0 0000000000 0 8 8 44 88 0 8 0 8 00 888 8 8 0 0 22 0 000 0 88 2 2 0 0 0 0 0 0 0 2 0 0 0000000 00 8 8 8 0 00 8 8 0000000 0 2222222 0 0 888 2 0 55 5555 2 0 22222 8888 0 2 5 44444444444 0 55555555555555 2 0 2 5 0 00000 0 0 6 0 0 00 0 0 00000 8 0 22222222222 5 0 88 00000000000000000 0 0 2 2 66 8 8 0 66 0000 2222 0 7 7 4 00 6666666 4 6666 7 3 7 7 00 44 0 7 99999999999999999 1 0 4 0 4 7 000 7 1 0 2
consensus : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATG---A------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TTTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTT-AA-AGCGC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA----TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----CG-C---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
Reference ( family-4284 ) : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATG---A------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TTTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTT-AA-AGCGC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA----TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----CG-C---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|1 : AAATTATTGTATA---TCATAAAGCCC-CACCATTA--GGAAAATGATTGCATCATCTCGAGACATTGAAGTATGTATCTCTGCCAGAA-TATATGCAATATA-GTTT-----ATCATAC--TTCTATATGAGAACATTG-CCAAATATGAATTACCTTG-CATAATAGTATTTG-AAGGGAA-----------ATGTCATGCAGTCTCTTTAATTAAA-ATTCTTTT------AATGGTTCTTCTGATTCA----GAGGTTAGGGTT--AAAG-ATAT-GCTG--TCTCATTGAGGACGCCTACAT-AATG---AATTCCATT-----GTTATCAAGCTTCAAGAC-CACCATTTAC-CCTCA-CTGGACAC-ATTTCTTGTCGATTGAATAAACCATTGA-GCAGGGAAATAGTT-ACATCTCATGGGAA-AGTACACTCTTAAT-TGAA-TCTTTT----GCATACTCTGCAATCTTAATA-ATCACAGA-TTGTTGATAATT-AGATAACTTCCATAAGTCCAATTATT-CAAT-TTCTCACTATGCATGAAATAAAAGATTGTGGACAAAGATATA--GAAACTTT-TG--TAAATAA-A--TAATAATGGATTTTTTTTCC---CCAATTGTTTA------------TTGTGTG--CCCAC------AA-AAGTGATCAATGGTGAGTCAGACAGACTTCAAGTT-GTATA-TATGTACAGTTTTC-GAGTGC-CTCTGAAAGGTAAA-TTTAATAC--AATTACATCT-TGGTTGATT-G--TGATTT--AAACATATCAG-CTATTT-CTTCAGTCAGAGGACCTGAAAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAACA-TTAGT--GGACAAATACATT-CTG-TATTTGTGAAAAG---A-AACATATGATCTAGAATATGG-TATGTTTTTGAAG-TTTTAATTTGCTAGCTCCATA--AATATAGTGAAATTT--AA-TTT-CTTCGTGGC-ATGCTTATCTCT-TTATTGAAATG--AT-TTTTGATTGAAACGAA-AGGTG-ATATG-TTCAA--TGTCGA------------TTTTTTGAATATATCTATTTGCG--AGTTAG-ATCAT------ATATAACACCTGGGTTCAACATG--------------TCCAATAACAACCAGTGCACAAACGAATGCCAAAGCAGGAAGA--GGTTGACC-GGATAG-ATTTTT-AATAGCAC--ATATCCCATGGCACCATTTGGTGCT-TACACAAGTGATAGC---CT-----ACA----A-ATGTGAAT-TCC-GTA----AGATTGACAAGTTAGCTCATTCA-TTATGC-ATTG-T-CTGTGGCATCCAT-TGTAGTT-TTG--CAAAGGAAAAAAAATTATTAGGTAATTGGTTT--GCATTGATCCTTGAGGCTTTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTC-TAA--GTCATGGG-AAAATGGTCA-TGG------TACT-AACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGGCCACATTCTCGTCATAATAGC-CATCAAAACA-TGAATACTTTCAGAAGGAACAG--------CATCTGTATTAACAAGCATATATATGTCAAATGAATATCATCGTGAATATCATTATAGCAATACAGGGATAGATAATGAAAA--TTTAAAAAGAAAGGGAGTGCGTGGGTTGAAACCCA--TTTATACTATCCACCTAAAAAGAGGAGGTTGATGGGGTGT--AACAAATC-G-CAATATAA-CCCCATGATGACCATCCCAAA-GAAGAGGGGTGCCCCCCCGCCCCCCTTGGCTATTCAGTCATTGGGATAATTGAAAG-GGATAACACATCAATGTT-AAACTTTACA-ATTTTTCATTTTTAATCCAGAATTCAAAACTACAATAT-AAC-TATAATT-TGTTGGTGTTTTAATAA----------ATGTACATTTGTC-CTGATGG-ATCAGGAACATAT--GTTCATGTTAGTTTACAAACAAAAATTACAC--ATAATTCTTATTTTTTAAAGAT-T-AATGAACTTTGTAAAACATGATAGGATACGGTTCTAAACTGACAAATAC-GTGGTCAAAAGTATTTTCTTGACATAACAGTTCTTTTGTAAAAAGATACTGAA-CAACACATGCAATATCTATGATTAAAACATTACCATGTTTGATTAAAAGC----G-GTATTAAGA--ATCTGAA-TAAATTAATTATCAGGAAAACTCT-------ATAAATAAACATTTTAAAAAATGCAATGGCAGTTTCAGCGACCAAGAGAAATCACTGTAATTTACAAGTGCTTAGGAT----------TTAATTATCAATCAGGAAG-CTGAACAAAAAGA--T--ACAA-A--GA-TACTTGTATG-----------GCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTCATTTATCCC-ACAATGACATA-CTGGAAAGTTGG--G-ATGTATTG-----TTAGTTAATAAAATCTGTAGAAAACAAAAACCCTTTAATTGTCTTTATTA-CCTGAAATTGTAAGTGTTTCGAAATAGTAT-T--T------ATATCAATC-TCCAGTCGTAAG--GTACATTGGTGGCAGT--AACTGCT---TCTCGGGTTTAGATTCTTTAAAAATATAAGAACTAT-CATTTGTTAACCTGCATCTAATAAATCCA----CTTCTTTCATT----TATGTG-CATC-AG--AGGAATTTA-------TACTGGCTA-TAAAGTTCGTTATTTACCGCT--TTTTGT-AG-GTAAA-CCA-------------AATAC-CAACAAAGC-TGCATATTGAGCAGCTGCCC-GGAAGTAGTAAATCGAAAGT-GTGAAAAGATAAACGAAGATTAGG
gi|10 : acagcccatagaccccggttctgcctataatgtcgttggcccccccctcccgtcagtccgacttcaaatcctggaaatccaccatcaaatttcatattggtttttaT-GATT-TT---AAA-ATAAGAACTAT--ATTTGTTTACTTGCATCT-ATAA-TCCA----CTTTTTCCACT----TGTT-G-CATCAGGTAAGGAATTTA-------TGCT--CTCAC-AAGTTTGTT-TT-A-CCCTGCTTTTGTAAGCGTAAAGCCATA----TG-C---AA----CAACAAAGCTTGCA-CTTCGACAGCTGCCCGGGAAGTAG-AAATCGAAAGTGG---AAAG-T-AACGA-ACTTAagaccat
gi|11 : AACTAT-TAT--GTTTACCTGCATCT-ATCGA--CAAGGTTTTTTTTCTCT----TCTTAG-CATC-GGTTGGGAATCTAAATAAACTGC-AGCTC-T-GAGT-CG------A-CCCT---TTTATATGCGTACA-TGT-A----CA-CTCAAACGCAAAACAAAGC-GGCATTATTGTCTGCCGCCT-TGAAGTATTGA-CCGAAATT-G---AAAG-TAAACGAGATTTAGGcaga
gi|12 : TTG-CATC-AGTGAGGAATTTA-------TGCAGGCTA-C-AAGTTTGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----TG---------CACAACAAAGC-TGCATCGTTGACATCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAG
gi|13 : CT----TTTTTG-CATC-GAAAGGGAACATA-------TACAGGCTG-C-AGGTTTGTT-TTCA-TCTTG-TCATATGAGTGC-AA-CCGTA----GG-C---AA-----AACA--------ATCTTTGACGGCTGTCC-AGAAGCAGT-ATTTGAAAGT-G---AAAG-TGGACG
gi|14 : CCTGCATTCAGATTGACT-CACGT--ACC-G-CATG-CATAACTGGA----TGGATG-AAGTATTT-----TTAATC-AT-AACTC-AAGAAAAAT-CAAACCTTTTAACTA--TTCATTG-CCTAAAATTGTCA-T-----TAAAGA-TAT-T
gi|15 : GTGCAAGTCTATAATAATCATGGGGAAATTG-TCACTAGCA----T--TGAGCTCTTGTACTGCTCATTAATATCTTAGTAGCTGAATGGG-CACATTCCCATCATAGTATC-CACAAATACATTGA
gi|16 : act-TCTCT-TTATTGAAATCATAT-TTT-GG-TGAAAAGAA-AGGTG-ATATG-TTCAA--TGTCATTCCTTCAAATGTTTTTTTT-ATATATATATTTGCATTAGTTAGAATCAT------ATATAACACCTGGTTTCAAc
gi|17 : GTT-AT-AACTC-GTAGAAAAC-AAAACTCTTTAGCTG--TTTATTA-CCGGGAATTGTAAGT-----GAAATA-CAT-CT-T------ATTTCAATCGCCCAGTCGT-GA--GTACATTGG
gi|18 : AAAACATTTACATG-TTGATCAAATGTGCATGTGTATTAAAATAATTTTAATTAATTTAATT-T--GGGAA----C-------ATAAAAAA-----------AATGCAAT-GCAGTTTCAGCGACC-ag
gi|19 : AGAAGTATATGCAATATAAGTTTTTT-CATTCTGC--T-----ATGATAACATGT-CCAAATATAAATTATCTTG-CA--ATGGTATT--TGAGTGAAGATTGTAGTTGAT
gi|2 : GTAAAGAAATACTTGCATA-CATCATAAAGCC---ACCATTAAGGGAA--TGATTGCATC---TCGAGACTAAATAGAATGT--CTCTGCCAGAAGT-TATGCA-TATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-TA--ATAGTATTTGTGAGT-AAGATTGTAGTTGATGTCATGCATTCTTTTTAA---AA-CTTATTTTTTCTGAAATTGTTATTCTGATTTC----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTCCATTA-------------TT-----GATATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTTTTGT-GATTGAATAAACCATTGA-GCATGGAAATGATTCACATCC-ATGGGAA-T-TACACTCTTAAT-TGAA-TCTTTT-TGT-CATA-TCTGCAAATCTAATACATTACAGACTTGT-GAGAATTCAGATAACTTCCATAAGTTCAAATATT--------TTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTT---A--TAA-TAATAATTAATAACGATTTTTTTTTTT---GCAATTGTTTA------------TTTT-TG--CC-ACTGTGACAA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAAATTTAATACCAAATTAAATCT-TG-GCAATT-G--TGATTTTTAAACTTATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGACA-CATA---CAGCTGAAAAATA-ATTGT--GGACAA-TA-ATTTCTG-TA-TTGTG-AAAG---------------CTAGAATAT-G-T-TGTTTT-GAAGTTTT-AATTTGCAAGCTCCATA---------TG-AATGT--AACTTTTCTTCATGGCTATTCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTA-ATATATCTATTTGCA--AGTTAGAATCAT------ACATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATG-----ACAGCAAGAGAGGTTGTACAGGATAG-A-TTTT-AA-AGCAC-AATATCCCATAGCAC-ATTTGGTGCTATACACAAGTGATAGC---CTTTGTTGCATTTGACATTTGAGT-TTCTGTA----AGA-TGACAA-TTAG-TCATTCATTTATG---TT-ATGTTGTGGCATCCAT-TGTAGTTCTTG--CAGAGG----AAAACT-TTAG-TAA-TGGTTTTGGCATTGACCCTTGAGA--TTTAGATC-CTTTA----------G-ATT---------AAGGTTCAACTTCATAA--GTCATGGG-AAATTGGTCACTGGTAGTGGTACTAAACTTTTGTACTGCCTATCCACATCCGAGTAGTTGAATGGG-CACATTATCGTCATAATAGCGCATCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAAGAAGCATATATATGTCAA-TGAATATCATC------------ATAGCAATAAAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTAGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--AGGTGTAAAAAAAAACAACCAATATAACCCCCATGATGACCATCCC-AACAAAGAGGGGTG------------CCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATATTAAAACC----A-ATTTTTCATTTTTAA--CAAAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGG-GCG-ATA-GCCCATG-TAGTTTAC-AAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGACAT-AAGAAGCTTTGTAACA-ATG-CAGGATACAG----AAA-TG--AAATACAGT-GTCAAAAGTATTTTC-AGACGTAACA-TTC-TTTGT-AAGGGATACTGAACCAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCACATG-----T-GTAGTAAGA--ATTTGAATT-ATTTAATT-T--GGGAAACTCTAAAAAAAAAAAAAAAA----AAAAAAAATGCAAT-GCACTTTCAACAA-C-AGAAAAAT-G-TGTAA-TTACAAGTGTGTAGGATTAATTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAACAA--T-GACAATTT-AA-T-TTTGTATGATTCACACAGTGCCCCCCCCCCCCCTTGCGTCCATAGTGACTT--CT---------AATTCCATA-CTGGAAAGTTGGGTG-ATGTTTTGTTATATTATTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAATTG--TTTATTA-TCTGAAATTGTAACT-----GAAATA-TATCTCATAAAGTCATATCAATCGCCCAGTCGT-AG--GTACATTAGTG--------------------CGGATTT-GATT-TTTAAAAATATAAGAACTAT-GAATTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-AGTAAGGAATTTA-------TGCTGGCTA-T-AAGTTCGTT-TTTA-CGCTG-TTTTGTGAGCGTAAT-CCA-AATACTGTT---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAATAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|20 : GTAA-TGGTTTTGGCATTGATCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTCTTAA--GTCATGGG-AAATTGGT
gi|21 : atgtaTCAGGAAAACTG-ACAAAAAGA--TAGACAA-ATAAA-TACTTATATG--
gi|22 : ---AATTCACAACAAAGC-TGCATCTTTGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGattcacacagtgcccctttcctgcct
gi|23 : ACATCTGGTTTCAACATGACACTAGCTAGATGTCCAAT-AC-ACCAGTG-ATCAAC-AA
gi|24 : g--AGTTAGAATCATTCATCTATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-A
gi|25 : -AATTT--AACTTC---TCTTGGTTATGCTT-TCTCT-TTATTGAAATAATAT-TTT
gi|3 : TAAT----ATAACTTGCATAAGTTCAAGTATTTCA-TATTTTCCCCATGC-TACAATAAA-TATTCTGGACAAAGATATACCGAATTTTTGTAAATAAATAA-AATTAATAATGATTTTTTTTTTTAGGGCAATTGTTTAGCATTGTTGTATTTTT-TGGGCC-AC------AATA--TA--CAATG-TGAGTCA-A-AGACTTCAAGTTTGTATACTATGTACAGTAT-CGTAGT-CGCTCTGAA-GGTAAA-TTTAATAGGCAATTAAATCTGTG-TTAATTTGATTGATTTTTAACTATA--AGGCTATTTCCTTCAGT-AAGCGAC-TG-AAAACTGTACAA-GAGAAAACCCAGAGCAGCTGAAAAATACATTGTTGGGACAA-TA-TTT-CTGGTA-TTGTT-GAAGCATATGATA------CTAGATAAT-GGT-TGTTTTTGACGTTTTTAATTTTCAAGCTCCATGATAGT----TG-AATTTTAAAC-TT-CTTCGTGGCTATGCTT-T-TCTGTTATTG----AATATATTTTGA-TG-AACGAAGAGGTGAATATGCTTCAATGTGTCG-------------TTTTTTG-AAATAT---TTTGC---AATTAGAATCAT-------TATAAACCCTGGTTTCAACATG--------------T-CAAT--C-A-CAGTG--TCA---AATGC----GCAGG-AGAG-GGTTGACCAGGATAGCA-TTTTAAA-AGAGCAAATATCC
gi|3 : GATAGCATTTT-----AAA----A-GAGCAAATATCC-ATAGACAAGA-TGAAAA-T-AG-TCATTCATTTATGTTATTGAT-CTGTGGCATC-ATATGTAGTTATTGGGCAGAGG----AA--CT-TTAAGTAA-TGGTTTTG-CATTG-CCCTTGAGA--TTTACATCGCTTTAGATTAGGTGCACATTCTTAAGTCATAGGTGCAACTTCTTAA--GTCATGGG-AAATTGGTAACTGGTA------CTAAACTTTTGTACTGCCCATTCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAGTGCTGGCTCATCTG---TAACAAGCATATATACGTCAAATGAATCT--------------------TAATACAGGGATAGATAATGAAACTCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT----AAACAT-TTCAATATAACCCCCATGATGACCATCCCAAACAAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAA---T-AAACT----A-A------ATTTTTCAC-AAGAATTCAAAACTACAATAT-AACATATAAGA-TGTGGGTGTTTGAATGAATGTACGTACATGTACA-TTGTCTCTGATGGCATCAGGAGC--ATA-GTCCATA-TAGTTTACAAAC-AAAATTACACATATATTTA---TTTTTTAAAGAT-TAAAGGAGTTTTATatagacaagatgaaaatagtcattcatttatgttattgatctgtggcatcatatgtagttattgggcagaggaactttaagtaatggttttgcattgcccttgagatttacatcgctttagattaggtgcacattcttaagtcataggtgcaacttcttaagtcatgggaaattggtaactggtactaaacttttgtactgcccattcacatccgagtagttgaatgggcacattctcgtcataatagccaccaatacattgaatacttcagaaggaacagtgctggctcatctgtaacaagcatatatacgtcaaatgaatcttaatacagggatagataatgaaactctttaaaaagaaagggagtgggtgggttgaaacccaagtttatactatccacctaaaaagaggtgagggtgtaaacatttcaatataacccccatgatgaccatcccaaacaaagaggggtgccccttgttattctgtcattgtataatgaaagtggataaacatcaataaactaaatttttcacaagaattcaaaactacaatataacatataagatgtgggtgtttgaatgaatgtacgtacatgtacattgtctctgatggcatcaggagcatagtccatatagtttacaaacaaaattacacatatatttattttttaaagattaaaggagttttat
gi|4 : taatataacttgcataagttcaagtatttcatattttccccatgctacaataaatattctggacaaagatataccgaatttttgtaaataaataaaattaataatgatttttttttttagggcaattgtttagcattgttgtattttttgggccacaatatacaatgtgagtcaaagacttcaagtttgtatactatgtacagtatcgtagtcgctctgaaggtaaatttaataggcaattaaatctgtgttaatttgattgatttttaactataaggctatttccttcagtaagcgactgaaaactgtacaagagaaaacccagagcagctgaaaaatacattgttgggacaatatttctggtattgttgaagcatatgatactagataatggttgtttttgacgtttttaattttcaagctccatgatagttgaattttaaacttcttcgtggctatgcttttctgttattgaatatattttgatgaacgaagaggtgaatatgcttcaatgtgtcgttttttgaaatattttgcaattagaatcattataaaccctggtttcaacatgtcaatcacagtgtcaaatgcgcaggagagggttgaccagAAACTACAATATTAAC-TATAAGTATGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATAAGTCCATG-TAGTTTACAAAC-AAA-TTACAC--ATATTTAT--TTTTT-AAAGAT-T-AAGAAGCTTTGTAAAA--TG-TAGGATACAGTT-TAAA-TG--AA-TACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAG-GATACTGAA-CAACACATGCA-TAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATTTGAATTAATTT-ATT-T--GGG-AACTCT-------ATAAA----------AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAAAAAT-A-TGT-A-TTACAAGTG-----------CTTAGGATTAATTATCAATCAGGAAGACTA-ACAAAAAGATGT-GACAA-AT-AGTTACTT-TGTA--TC------CCCCCCCCCCCCCCCTTGCGTTCATAGTGTCTT--CTT-TACCAA-AATGACATA-CTGGAAAGTTGGGTGAATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTATTTATCCTGAAATTGTAAGT-----G-AATA-TAT-TTA-------ATATCAATCGCCCAGTCGT-AGGTGTACATTGGTGGA-GTTAAA---CTGCATCTCGGATTT-GATT-TTTAAAAATATAAGAACTATATATTTG-TTACCTGCATCT-ATAAATCCA----CTTCTTCCACTTGTGTGTTTGCCATCAAGTAAGGAATTTT-------TGCTGCCTT-T-AAGTTCTTT-TTCA-CGCTG-TTTTGTG-GCGT-AA-CCA-------------AATACACAACAAAGC-TGCATCTT-GGCAGCTGCCC-GGAAGTAGTAACTCGAA
gi|5 : tactttcaagaagatTGTAAAGCATCATAAAGCCGGCACCATTAGGG--AAATGATTGCATC---TCGAGACATAATAGAAT-T--CTC-GCGAGAAGTATATGCAG-ATAAGTTTTTT-CATTATGC--T------TGAGAACATGTTCCAAATATGAATTATCTTGGCA--ATAGTATTTG---GTGAAGATTGTAGTTGATGT-ATGCAGT-TCTTTAA---AA-GCTTTTTTTCATGAAATTGTTATTCTGATTTTATTCTAGGGTATGGTTTAGAAGAATATAGCTGCATCTCATTGAGA--G-CTACATTAATG---A------TTATTGGGGCAT-AAG--TCAAGACGCAGC-TTTACGC-TCAGCAG-ACACCATTTCTTGT-GATTG-ATAAACCATTGAGGCATGGAAAT-GTT-CCATTCCATGGGAATC-TACA--TTTAATATGAATTCTTTTCTGTACAT--TCTG-AAT
gi|6 : tgtcgtgccccccgtccaacttcaaatcctggatccaccatcaaattttcagtattgggttattaacattcatttcT-AAACT----ACATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAATT-TGTGGGTGTTTTAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAACATATA-GTTCATG-TAGTTTACAAAC-AAAATTACAC--ATATCTAT--TTT-TTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACATAACA-TTC-TTTGT-AAAAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATCTGAATTAATTTAATT-T--CGGAAACTCT-------ATAATAAAATT--TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---gt
gi|7 : TAAAATAATACTTGTATA-TATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATATAGTAT--CTCTGCCAGAAGTATATGCAATATAAGTTTATT-CATTATGCTAT-----ATGAGAACATGT-CCAAATATGAATTACCTTG-CA--ATAGTATT--TGAGTGAA----------GATGTCATGCAGTCTCTTT-----AA-TTTTTTTTTTTTTAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATGATCA------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACAATTtaat
gi|8 : gtccgacttcaaatcctggatccacccatcaaattttcaatattggttatGTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAAGGAAAATTATTGCATC-----------------AATGT--CTCTGCCAGACGTATACGCAATATAAGTTTTTTTCAATATGC--T-----ATGAGAACGTGT-CCAAATATGAATTATCTTG-CA--ATAGTATT--TGAATGAAGATTG-AATTGATGTCATGCAGTCTCTTTAA---AACATTTTTTTCCCTGAAATTGTTA---TG---TT----CAGGGTATGGCTTAGAGG-ATAT-GCTGCATCTCATCGAGA--GCCTACATT-------A------TT-----GGCATCAAG-TTAAA
gi|9 : cagcccatagaccctctgcctcacccccttcaacttcaaatcctggatccacccatcaaattttcaatattggttattaaaattcattctAATTGTTTA------------TTTG-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTACATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAAAC-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|26 ): CATAGTATCCACAAATACATTGACTTATTC
Alignments
lowQualScore : 11 11 1111 11 11111111 222 111 1111 11 4444444444444444444444 1 1 1 1 1 1 1 1 1 1 222 1 1 33333 22 1 1 1 22 444444 1 2 11 333333 1 2222 555555555555 1 11 1 222222 1111 1 1 1 1 1 1 1 1 1 1 11 1 1 1 11 1 1 1 1 1 1 111 1 11 1 1 1 1 1 1 888888888888888 22222 555555555 1 11 11 1 1 1 1 11 6666666666666 11 222 2222222 44444444444444 11 1 33333 22 111 1 1 22 1 1 6666666666666666666 1 1 2222 1 1 1 22 1111 1 2 11 2222 1 1 11 1 555555555555555555555555 11 33333333 1 1 1 44444444 222 7777777777777777 2222 11 222 222 66666666666 1 1 1 1 11 1 222222 11 1 3333333333 11 111 11 1 1 11 1 1 1 1 1 1 1 3333333 11 11 2222222 4444444 111 1 2222 1 11111 2222 1 66666666666 55555555555555 1 1 22222 11 22222 55555555555 1 11 99999999999999999 1 1 11 1111 1111 1 1111111 1111 11 55555555555555555 111
lowQualScore : 11 33 3 0 4444 333 1 3 11 0 1 3 6 66666666 6 6 99 555 999999 1 0 444 99 888 0 0 7777 0 8 8 11 2222222222222222222222 88 0 0 0 0 0 0 8 3 7 3 2 3 6 777 6 3 3 00000 00 6 5 5 5 00 1 444444 7 3 6 88 444444 7 3 7 0 4444 111111111111 0 33 0 888888 4444 3 0 2 0 0 0 0 0 0 0 0 0 11 1 0 0 0 33 3 3 0 2 0 2 0 0 5 3 0 777 1 0 33 5 0 0 0 0 0 111111111111111 11111 7 7 7 666666666 0 33 55 22 0 3 8 8 0 0 8 3 0 3 0 0 0 33 5555555555555 00 8 111 0 3333333 77777777777777 88 8 2 33 3 0 55555 7 00 7 777 3 3 0 00 5 5 1111111111111111111 0 3 3 8888 3 3 7 3 7 55 8888 6 3 6 88 8888 7 3 2 0 3 2 3 33 0 888888888888888888888888 8 11 8 2 77777777 7 0 0 3 3 88888888 333 0 7 1111111111111111 7 7 8888 88 555 999 6 7 77 55555555555 3 3 3 7 3 11 0 222222 3 77 8 0 8 5555555555 8 0 0 99 88 8 0 8 0 11 111 0 0 8 8 33 0 999 0 33 3 3 0 0 0 0 0 7 0 3 0 8 1111111 11 0 0 0 8 11 0 0 6666666 6 5555555 8 8 444 3 0 99 9999 3 0 77777 0000 0 3 6 11111111111 1 44444444444444 9 0 3 6 0 55555 8 8 0 8 8 11 8 5 00000 0 8 00000000000 2 0 33 66666666666666666 0 0 3 3 66 0 0 8 11 7777 4444 1 1 5 1 22 8888888 5 1111 5 5 5 0 00 33 5 5 77777777777777777 3 5 7 5 3 5 000 5 0 1 0
lowQualScore : .. .. . . .... ... . . .. . . . . ........ . . .. ... ...... . . ... .. ... . . .... . . . .. ...................... .. . . . . . . . . . . . . . ... . . . ..... .. . . . . .. . ...... . . . .. ...... . . . . .... ............ . .. . ...... .... . . . . . . . . . . . . .. . . . . .. . . . . . . . . . . . ... . . .. . . . . . . ............... ..... . . . ......... . .. .. .. . . . . . . . . . . . . . .. ............. .. . ... . ....... .............. .. . . .. . . ..... . .. . ... . . . .. . . ................... . . . .... . . . . . .. .... . . . .. .... . . . . . . . .. . ........................ . .. . . ........ . . . . . ........ ... . . ................ . . .... .. ... ... . . .. ........... . . . . . .. . ...... . .. . . . .......... . . . .. .. . . . . .. ... . . . . .. . ... . .. . . . . . . . . . . . . ....... .. . . . . .. . . ....... . ....... . . ... . . .. .... . . ..... .... . . . ........... . .............. . . . . . ..... . . . . . .. . . ..... . . ........... . . .. ................. . . . . .. . . . .. .... .... . . . . .. ....... . .... . . . . .. .. . . ................. . . . . . . ... . . . .
lowQualScore : 22 00 8 8 8888 000 0 2 00 8 7 5 7 88888888 7 7 22 333 222222 0 8 000 00 444 8 8 0000 8 0 0 00 6666666666666666666666 88 0 0 0 0 0 0 8 3 3 3 0 3 7 777 7 3 3 00000 77 7 0 0 5 77 0 777777 3 3 7 33 000000 3 3 3 7 0000 222222222222 0 88 0 888888 8888 2 0 5 0 0 0 0 0 0 0 0 0 88 0 0 0 0 88 2 2 0 5 0 5 0 0 5 2 0 555 2 0 88 5 0 0 0 0 0 888888888888888 00000 3 3 3 777777777 0 88 88 55 2 2 0 0 8 8 0 2 0 2 0 0 0 88 0000000000000 22 8 555 8 8888888 00000000000000 88 0 5 22 2 0 00000 3 00 3 777 3 3 7 77 0 5 0000000000000000000 7 3 3 3333 3 3 3 3 3 33 3333 7 3 7 33 3333 3 3 5 0 2 5 2 88 0 555555555555555555555555 8 00 0 5 88888888 0 0 0 2 3 33333333 333 7 3 3333333333333333 3 3 3333 33 777 000 7 3 33 00000000000 3 3 3 3 3 00 0 222222 2 00 0 6 0 0000000000 0 8 8 44 88 0 8 0 8 00 888 8 8 0 0 22 0 000 0 88 2 2 0 0 0 0 0 0 0 2 0 0 0000000 00 8 8 8 0 00 8 8 0000000 0 2222222 0 0 888 2 0 55 5555 2 0 22222 8888 0 2 5 44444444444 0 55555555555555 2 0 2 5 0 00000 0 0 6 0 0 00 0 0 00000 8 0 22222222222 5 0 88 00000000000000000 0 0 2 2 66 8 8 0 66 0000 2222 0 7 7 4 00 6666666 4 6666 7 3 7 7 00 44 0 7 99999999999999999 1 0 4 0 4 7 000 7 1 0 2
consensus : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATG---A------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TTTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTT-AA-AGCGC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA----TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----CG-C---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
Reference ( family-4284 ) : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATG---A------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TTTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTT-AA-AGCGC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA----TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----CG-C---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|1 : AAATTATTGTATA---TCATAAAGCCC-CACCATTA--GGAAAATGATTGCATCATCTCGAGACATTGAAGTATGTATCTCTGCCAGAA-TATATGCAATATA-GTTT-----ATCATAC--TTCTATATGAGAACATTG-CCAAATATGAATTACCTTG-CATAATAGTATTTG-AAGGGAA-----------ATGTCATGCAGTCTCTTTAATTAAA-ATTCTTTT------AATGGTTCTTCTGATTCA----GAGGTTAGGGTT--AAAG-ATAT-GCTG--TCTCATTGAGGACGCCTACAT-AATG---AATTCCATT-----GTTATCAAGCTTCAAGAC-CACCATTTAC-CCTCA-CTGGACAC-ATTTCTTGTCGATTGAATAAACCATTGA-GCAGGGAAATAGTT-ACATCTCATGGGAA-AGTACACTCTTAAT-TGAA-TCTTTT----GCATACTCTGCAATCTTAATA-ATCACAGA-TTGTTGATAATT-AGATAACTTCCATAAGTCCAATTATT-CAAT-TTCTCACTATGCATGAAATAAAAGATTGTGGACAAAGATATA--GAAACTTT-TG--TAAATAA-A--TAATAATGGATTTTTTTTCC---CCAATTGTTTA------------TTGTGTG--CCCAC------AA-AAGTGATCAATGGTGAGTCAGACAGACTTCAAGTT-GTATA-TATGTACAGTTTTC-GAGTGC-CTCTGAAAGGTAAA-TTTAATAC--AATTACATCT-TGGTTGATT-G--TGATTT--AAACATATCAG-CTATTT-CTTCAGTCAGAGGACCTGAAAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAACA-TTAGT--GGACAAATACATT-CTG-TATTTGTGAAAAG---A-AACATATGATCTAGAATATGG-TATGTTTTTGAAG-TTTTAATTTGCTAGCTCCATA--AATATAGTGAAATTT--AA-TTT-CTTCGTGGC-ATGCTTATCTCT-TTATTGAAATG--AT-TTTTGATTGAAACGAA-AGGTG-ATATG-TTCAA--TGTCGA------------TTTTTTGAATATATCTATTTGCG--AGTTAG-ATCAT------ATATAACACCTGGGTTCAACATG--------------TCCAATAACAACCAGTGCACAAACGAATGCCAAAGCAGGAAGA--GGTTGACC-GGATAG-ATTTTT-AATAGCAC--ATATCCCATGGCACCATTTGGTGCT-TACACAAGTGATAGC---CT-----ACA----A-ATGTGAAT-TCC-GTA----AGATTGACAAGTTAGCTCATTCA-TTATGC-ATTG-T-CTGTGGCATCCAT-TGTAGTT-TTG--CAAAGGAAAAAAAATTATTAGGTAATTGGTTT--GCATTGATCCTTGAGGCTTTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTC-TAA--GTCATGGG-AAAATGGTCA-TGG------TACT-AACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGGCCACATTCTCGTCATAATAGC-CATCAAAACA-TGAATACTTTCAGAAGGAACAG--------CATCTGTATTAACAAGCATATATATGTCAAATGAATATCATCGTGAATATCATTATAGCAATACAGGGATAGATAATGAAAA--TTTAAAAAGAAAGGGAGTGCGTGGGTTGAAACCCA--TTTATACTATCCACCTAAAAAGAGGAGGTTGATGGGGTGT--AACAAATC-G-CAATATAA-CCCCATGATGACCATCCCAAA-GAAGAGGGGTGCCCCCCCGCCCCCCTTGGCTATTCAGTCATTGGGATAATTGAAAG-GGATAACACATCAATGTT-AAACTTTACA-ATTTTTCATTTTTAATCCAGAATTCAAAACTACAATAT-AAC-TATAATT-TGTTGGTGTTTTAATAA----------ATGTACATTTGTC-CTGATGG-ATCAGGAACATAT--GTTCATGTTAGTTTACAAACAAAAATTACAC--ATAATTCTTATTTTTTAAAGAT-T-AATGAACTTTGTAAAACATGATAGGATACGGTTCTAAACTGACAAATAC-GTGGTCAAAAGTATTTTCTTGACATAACAGTTCTTTTGTAAAAAGATACTGAA-CAACACATGCAATATCTATGATTAAAACATTACCATGTTTGATTAAAAGC----G-GTATTAAGA--ATCTGAA-TAAATTAATTATCAGGAAAACTCT-------ATAAATAAACATTTTAAAAAATGCAATGGCAGTTTCAGCGACCAAGAGAAATCACTGTAATTTACAAGTGCTTAGGAT----------TTAATTATCAATCAGGAAG-CTGAACAAAAAGA--T--ACAA-A--GA-TACTTGTATG-----------GCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTCATTTATCCC-ACAATGACATA-CTGGAAAGTTGG--G-ATGTATTG-----TTAGTTAATAAAATCTGTAGAAAACAAAAACCCTTTAATTGTCTTTATTA-CCTGAAATTGTAAGTGTTTCGAAATAGTAT-T--T------ATATCAATC-TCCAGTCGTAAG--GTACATTGGTGGCAGT--AACTGCT---TCTCGGGTTTAGATTCTTTAAAAATATAAGAACTAT-CATTTGTTAACCTGCATCTAATAAATCCA----CTTCTTTCATT----TATGTG-CATC-AG--AGGAATTTA-------TACTGGCTA-TAAAGTTCGTTATTTACCGCT--TTTTGT-AG-GTAAA-CCA-------------AATAC-CAACAAAGC-TGCATATTGAGCAGCTGCCC-GGAAGTAGTAAATCGAAAGT-GTGAAAAGATAAACGAAGATTAGG
gi|10 : acagcccatagaccccggttctgcctataatgtcgttggcccccccctcccgtcagtccgacttcaaatcctggaaatccaccatcaaatttcatattggtttttaT-GATT-TT---AAA-ATAAGAACTAT--ATTTGTTTACTTGCATCT-ATAA-TCCA----CTTTTTCCACT----TGTT-G-CATCAGGTAAGGAATTTA-------TGCT--CTCAC-AAGTTTGTT-TT-A-CCCTGCTTTTGTAAGCGTAAAGCCATA----TG-C---AA----CAACAAAGCTTGCA-CTTCGACAGCTGCCCGGGAAGTAG-AAATCGAAAGTGG---AAAG-T-AACGA-ACTTAagaccat
gi|11 : AACTAT-TAT--GTTTACCTGCATCT-ATCGA--CAAGGTTTTTTTTCTCT----TCTTAG-CATC-GGTTGGGAATCTAAATAAACTGC-AGCTC-T-GAGT-CG------A-CCCT---TTTATATGCGTACA-TGT-A----CA-CTCAAACGCAAAACAAAGC-GGCATTATTGTCTGCCGCCT-TGAAGTATTGA-CCGAAATT-G---AAAG-TAAACGAGATTTAGGcaga
gi|12 : TTG-CATC-AGTGAGGAATTTA-------TGCAGGCTA-C-AAGTTTGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----TG---------CACAACAAAGC-TGCATCGTTGACATCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAG
gi|13 : CT----TTTTTG-CATC-GAAAGGGAACATA-------TACAGGCTG-C-AGGTTTGTT-TTCA-TCTTG-TCATATGAGTGC-AA-CCGTA----GG-C---AA-----AACA--------ATCTTTGACGGCTGTCC-AGAAGCAGT-ATTTGAAAGT-G---AAAG-TGGACG
gi|14 : CCTGCATTCAGATTGACT-CACGT--ACC-G-CATG-CATAACTGGA----TGGATG-AAGTATTT-----TTAATC-AT-AACTC-AAGAAAAAT-CAAACCTTTTAACTA--TTCATTG-CCTAAAATTGTCA-T-----TAAAGA-TAT-T
gi|15 : GTGCAAGTCTATAATAATCATGGGGAAATTG-TCACTAGCA----T--TGAGCTCTTGTACTGCTCATTAATATCTTAGTAGCTGAATGGG-CACATTCCCATCATAGTATC-CACAAATACATTGA
gi|16 : act-TCTCT-TTATTGAAATCATAT-TTT-GG-TGAAAAGAA-AGGTG-ATATG-TTCAA--TGTCATTCCTTCAAATGTTTTTTTT-ATATATATATTTGCATTAGTTAGAATCAT------ATATAACACCTGGTTTCAAc
gi|17 : GTT-AT-AACTC-GTAGAAAAC-AAAACTCTTTAGCTG--TTTATTA-CCGGGAATTGTAAGT-----GAAATA-CAT-CT-T------ATTTCAATCGCCCAGTCGT-GA--GTACATTGG
gi|18 : AAAACATTTACATG-TTGATCAAATGTGCATGTGTATTAAAATAATTTTAATTAATTTAATT-T--GGGAA----C-------ATAAAAAA-----------AATGCAAT-GCAGTTTCAGCGACC-ag
gi|19 : AGAAGTATATGCAATATAAGTTTTTT-CATTCTGC--T-----ATGATAACATGT-CCAAATATAAATTATCTTG-CA--ATGGTATT--TGAGTGAAGATTGTAGTTGAT
gi|2 : GTAAAGAAATACTTGCATA-CATCATAAAGCC---ACCATTAAGGGAA--TGATTGCATC---TCGAGACTAAATAGAATGT--CTCTGCCAGAAGT-TATGCA-TATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-TA--ATAGTATTTGTGAGT-AAGATTGTAGTTGATGTCATGCATTCTTTTTAA---AA-CTTATTTTTTCTGAAATTGTTATTCTGATTTC----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTCCATTA-------------TT-----GATATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTTTTGT-GATTGAATAAACCATTGA-GCATGGAAATGATTCACATCC-ATGGGAA-T-TACACTCTTAAT-TGAA-TCTTTT-TGT-CATA-TCTGCAAATCTAATACATTACAGACTTGT-GAGAATTCAGATAACTTCCATAAGTTCAAATATT--------TTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTT---A--TAA-TAATAATTAATAACGATTTTTTTTTTT---GCAATTGTTTA------------TTTT-TG--CC-ACTGTGACAA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAAATTTAATACCAAATTAAATCT-TG-GCAATT-G--TGATTTTTAAACTTATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGACA-CATA---CAGCTGAAAAATA-ATTGT--GGACAA-TA-ATTTCTG-TA-TTGTG-AAAG---------------CTAGAATAT-G-T-TGTTTT-GAAGTTTT-AATTTGCAAGCTCCATA---------TG-AATGT--AACTTTTCTTCATGGCTATTCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTA-ATATATCTATTTGCA--AGTTAGAATCAT------ACATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATG-----ACAGCAAGAGAGGTTGTACAGGATAG-A-TTTT-AA-AGCAC-AATATCCCATAGCAC-ATTTGGTGCTATACACAAGTGATAGC---CTTTGTTGCATTTGACATTTGAGT-TTCTGTA----AGA-TGACAA-TTAG-TCATTCATTTATG---TT-ATGTTGTGGCATCCAT-TGTAGTTCTTG--CAGAGG----AAAACT-TTAG-TAA-TGGTTTTGGCATTGACCCTTGAGA--TTTAGATC-CTTTA----------G-ATT---------AAGGTTCAACTTCATAA--GTCATGGG-AAATTGGTCACTGGTAGTGGTACTAAACTTTTGTACTGCCTATCCACATCCGAGTAGTTGAATGGG-CACATTATCGTCATAATAGCGCATCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAAGAAGCATATATATGTCAA-TGAATATCATC------------ATAGCAATAAAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTAGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--AGGTGTAAAAAAAAACAACCAATATAACCCCCATGATGACCATCCC-AACAAAGAGGGGTG------------CCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATATTAAAACC----A-ATTTTTCATTTTTAA--CAAAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGG-GCG-ATA-GCCCATG-TAGTTTAC-AAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGACAT-AAGAAGCTTTGTAACA-ATG-CAGGATACAG----AAA-TG--AAATACAGT-GTCAAAAGTATTTTC-AGACGTAACA-TTC-TTTGT-AAGGGATACTGAACCAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCACATG-----T-GTAGTAAGA--ATTTGAATT-ATTTAATT-T--GGGAAACTCTAAAAAAAAAAAAAAAA----AAAAAAAATGCAAT-GCACTTTCAACAA-C-AGAAAAAT-G-TGTAA-TTACAAGTGTGTAGGATTAATTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAACAA--T-GACAATTT-AA-T-TTTGTATGATTCACACAGTGCCCCCCCCCCCCCTTGCGTCCATAGTGACTT--CT---------AATTCCATA-CTGGAAAGTTGGGTG-ATGTTTTGTTATATTATTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAATTG--TTTATTA-TCTGAAATTGTAACT-----GAAATA-TATCTCATAAAGTCATATCAATCGCCCAGTCGT-AG--GTACATTAGTG--------------------CGGATTT-GATT-TTTAAAAATATAAGAACTAT-GAATTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-AGTAAGGAATTTA-------TGCTGGCTA-T-AAGTTCGTT-TTTA-CGCTG-TTTTGTGAGCGTAAT-CCA-AATACTGTT---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAATAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|20 : GTAA-TGGTTTTGGCATTGATCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTCTTAA--GTCATGGG-AAATTGGT
gi|21 : atgtaTCAGGAAAACTG-ACAAAAAGA--TAGACAA-ATAAA-TACTTATATG--
gi|22 : ---AATTCACAACAAAGC-TGCATCTTTGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGattcacacagtgcccctttcctgcct
gi|23 : ACATCTGGTTTCAACATGACACTAGCTAGATGTCCAAT-AC-ACCAGTG-ATCAAC-AA
gi|24 : g--AGTTAGAATCATTCATCTATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-A
gi|25 : -AATTT--AACTTC---TCTTGGTTATGCTT-TCTCT-TTATTGAAATAATAT-TTT
gi|3 : TAAT----ATAACTTGCATAAGTTCAAGTATTTCA-TATTTTCCCCATGC-TACAATAAA-TATTCTGGACAAAGATATACCGAATTTTTGTAAATAAATAA-AATTAATAATGATTTTTTTTTTTAGGGCAATTGTTTAGCATTGTTGTATTTTT-TGGGCC-AC------AATA--TA--CAATG-TGAGTCA-A-AGACTTCAAGTTTGTATACTATGTACAGTAT-CGTAGT-CGCTCTGAA-GGTAAA-TTTAATAGGCAATTAAATCTGTG-TTAATTTGATTGATTTTTAACTATA--AGGCTATTTCCTTCAGT-AAGCGAC-TG-AAAACTGTACAA-GAGAAAACCCAGAGCAGCTGAAAAATACATTGTTGGGACAA-TA-TTT-CTGGTA-TTGTT-GAAGCATATGATA------CTAGATAAT-GGT-TGTTTTTGACGTTTTTAATTTTCAAGCTCCATGATAGT----TG-AATTTTAAAC-TT-CTTCGTGGCTATGCTT-T-TCTGTTATTG----AATATATTTTGA-TG-AACGAAGAGGTGAATATGCTTCAATGTGTCG-------------TTTTTTG-AAATAT---TTTGC---AATTAGAATCAT-------TATAAACCCTGGTTTCAACATG--------------T-CAAT--C-A-CAGTG--TCA---AATGC----GCAGG-AGAG-GGTTGACCAGGATAGCA-TTTTAAA-AGAGCAAATATCC
gi|3 : GATAGCATTTT-----AAA----A-GAGCAAATATCC-ATAGACAAGA-TGAAAA-T-AG-TCATTCATTTATGTTATTGAT-CTGTGGCATC-ATATGTAGTTATTGGGCAGAGG----AA--CT-TTAAGTAA-TGGTTTTG-CATTG-CCCTTGAGA--TTTACATCGCTTTAGATTAGGTGCACATTCTTAAGTCATAGGTGCAACTTCTTAA--GTCATGGG-AAATTGGTAACTGGTA------CTAAACTTTTGTACTGCCCATTCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAGTGCTGGCTCATCTG---TAACAAGCATATATACGTCAAATGAATCT--------------------TAATACAGGGATAGATAATGAAACTCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT----AAACAT-TTCAATATAACCCCCATGATGACCATCCCAAACAAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAA---T-AAACT----A-A------ATTTTTCAC-AAGAATTCAAAACTACAATAT-AACATATAAGA-TGTGGGTGTTTGAATGAATGTACGTACATGTACA-TTGTCTCTGATGGCATCAGGAGC--ATA-GTCCATA-TAGTTTACAAAC-AAAATTACACATATATTTA---TTTTTTAAAGAT-TAAAGGAGTTTTATatagacaagatgaaaatagtcattcatttatgttattgatctgtggcatcatatgtagttattgggcagaggaactttaagtaatggttttgcattgcccttgagatttacatcgctttagattaggtgcacattcttaagtcataggtgcaacttcttaagtcatgggaaattggtaactggtactaaacttttgtactgcccattcacatccgagtagttgaatgggcacattctcgtcataatagccaccaatacattgaatacttcagaaggaacagtgctggctcatctgtaacaagcatatatacgtcaaatgaatcttaatacagggatagataatgaaactctttaaaaagaaagggagtgggtgggttgaaacccaagtttatactatccacctaaaaagaggtgagggtgtaaacatttcaatataacccccatgatgaccatcccaaacaaagaggggtgccccttgttattctgtcattgtataatgaaagtggataaacatcaataaactaaatttttcacaagaattcaaaactacaatataacatataagatgtgggtgtttgaatgaatgtacgtacatgtacattgtctctgatggcatcaggagcatagtccatatagtttacaaacaaaattacacatatatttattttttaaagattaaaggagttttat
gi|4 : taatataacttgcataagttcaagtatttcatattttccccatgctacaataaatattctggacaaagatataccgaatttttgtaaataaataaaattaataatgatttttttttttagggcaattgtttagcattgttgtattttttgggccacaatatacaatgtgagtcaaagacttcaagtttgtatactatgtacagtatcgtagtcgctctgaaggtaaatttaataggcaattaaatctgtgttaatttgattgatttttaactataaggctatttccttcagtaagcgactgaaaactgtacaagagaaaacccagagcagctgaaaaatacattgttgggacaatatttctggtattgttgaagcatatgatactagataatggttgtttttgacgtttttaattttcaagctccatgatagttgaattttaaacttcttcgtggctatgcttttctgttattgaatatattttgatgaacgaagaggtgaatatgcttcaatgtgtcgttttttgaaatattttgcaattagaatcattataaaccctggtttcaacatgtcaatcacagtgtcaaatgcgcaggagagggttgaccagAAACTACAATATTAAC-TATAAGTATGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATAAGTCCATG-TAGTTTACAAAC-AAA-TTACAC--ATATTTAT--TTTTT-AAAGAT-T-AAGAAGCTTTGTAAAA--TG-TAGGATACAGTT-TAAA-TG--AA-TACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAG-GATACTGAA-CAACACATGCA-TAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATTTGAATTAATTT-ATT-T--GGG-AACTCT-------ATAAA----------AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAAAAAT-A-TGT-A-TTACAAGTG-----------CTTAGGATTAATTATCAATCAGGAAGACTA-ACAAAAAGATGT-GACAA-AT-AGTTACTT-TGTA--TC------CCCCCCCCCCCCCCCTTGCGTTCATAGTGTCTT--CTT-TACCAA-AATGACATA-CTGGAAAGTTGGGTGAATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTATTTATCCTGAAATTGTAAGT-----G-AATA-TAT-TTA-------ATATCAATCGCCCAGTCGT-AGGTGTACATTGGTGGA-GTTAAA---CTGCATCTCGGATTT-GATT-TTTAAAAATATAAGAACTATATATTTG-TTACCTGCATCT-ATAAATCCA----CTTCTTCCACTTGTGTGTTTGCCATCAAGTAAGGAATTTT-------TGCTGCCTT-T-AAGTTCTTT-TTCA-CGCTG-TTTTGTG-GCGT-AA-CCA-------------AATACACAACAAAGC-TGCATCTT-GGCAGCTGCCC-GGAAGTAGTAACTCGAA
gi|5 : tactttcaagaagatTGTAAAGCATCATAAAGCCGGCACCATTAGGG--AAATGATTGCATC---TCGAGACATAATAGAAT-T--CTC-GCGAGAAGTATATGCAG-ATAAGTTTTTT-CATTATGC--T------TGAGAACATGTTCCAAATATGAATTATCTTGGCA--ATAGTATTTG---GTGAAGATTGTAGTTGATGT-ATGCAGT-TCTTTAA---AA-GCTTTTTTTCATGAAATTGTTATTCTGATTTTATTCTAGGGTATGGTTTAGAAGAATATAGCTGCATCTCATTGAGA--G-CTACATTAATG---A------TTATTGGGGCAT-AAG--TCAAGACGCAGC-TTTACGC-TCAGCAG-ACACCATTTCTTGT-GATTG-ATAAACCATTGAGGCATGGAAAT-GTT-CCATTCCATGGGAATC-TACA--TTTAATATGAATTCTTTTCTGTACAT--TCTG-AAT
gi|6 : tgtcgtgccccccgtccaacttcaaatcctggatccaccatcaaattttcagtattgggttattaacattcatttcT-AAACT----ACATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAATT-TGTGGGTGTTTTAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAACATATA-GTTCATG-TAGTTTACAAAC-AAAATTACAC--ATATCTAT--TTT-TTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACATAACA-TTC-TTTGT-AAAAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATCTGAATTAATTTAATT-T--CGGAAACTCT-------ATAATAAAATT--TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---gt
gi|7 : TAAAATAATACTTGTATA-TATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATATAGTAT--CTCTGCCAGAAGTATATGCAATATAAGTTTATT-CATTATGCTAT-----ATGAGAACATGT-CCAAATATGAATTACCTTG-CA--ATAGTATT--TGAGTGAA----------GATGTCATGCAGTCTCTTT-----AA-TTTTTTTTTTTTTAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATGATCA------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACAATTtaat
gi|8 : gtccgacttcaaatcctggatccacccatcaaattttcaatattggttatGTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAAGGAAAATTATTGCATC-----------------AATGT--CTCTGCCAGACGTATACGCAATATAAGTTTTTTTCAATATGC--T-----ATGAGAACGTGT-CCAAATATGAATTATCTTG-CA--ATAGTATT--TGAATGAAGATTG-AATTGATGTCATGCAGTCTCTTTAA---AACATTTTTTTCCCTGAAATTGTTA---TG---TT----CAGGGTATGGCTTAGAGG-ATAT-GCTGCATCTCATCGAGA--GCCTACATT-------A------TT-----GGCATCAAG-TTAAA
gi|9 : cagcccatagaccctctgcctcacccccttcaacttcaaatcctggatccacccatcaaattttcaatattggttattaaaattcattctAATTGTTTA------------TTTG-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTACATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAAAC-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---
blockSeqs : GC GG A T TAA T G . A T T TAT T G . TGT GATTGT G . CA TTC ATTC A A . TAATGATTATTGG T G . G . G . C . A G G C C TC C A T CTGTA A C C C . TC A TCATA A . C CC TGTAAA A T A TAGG GCATTGTTGTAT . GG . TGTGAC TA A . G . T C . G . G . A CA A G . T AT T T G C . C . C A A A GAG T C TG A . T G . . CATATGATA GGT T T T ATAGT . TA CT TC T . G A T . A G A C TG TTCCTTCAAATGT T A ATT TCATCTA ACACTAGCTAGATG A . C A A . C A GA A CA A . AA . A CTTTGTTGCATTTGAC A T GACA . . T . T TT ATG C A C GG . A . G . T G A . G GATTAGGTGCACATTCTTAAGTCA A TA G C TAGTGGTA G . G T . TGCTGGCT . A CATC T A . . AAA AAC C A CA C . . . T . TA A AC T C T A A ATGTACGTAC . AT AA . . AT T A A A . TTC . . A A . . . . . G C A . . TGCATGT TA . . AAAAAAA A ATTTT . . G A . TG TAAT A . TGTG TTT T A G ATTCACACAGT A TCTTTACCAA C A A A A TTATA . . . . . T G . . CTCATAAAGTC G . GT GAGTTAAACTGCA . . T T AT . AT AGGT TGTG G A C A TA AATAAAC T CAC . C . GC AA A G AATACTGTTAATA A T C G A G . . G
blockSeqs : C C G T ATA T A . G T . T . . . TG GATTGT G . C TCA . . . . TAATGATCATT T . . . . . . C . . . . . . T . . . TGT . . . G . . . . . A . . A T . . . . . A A . G . . . . . . . . . GC A . . . . T T . C . C . . A A . . T . . . . . . . . . GT . T . . . . CT C T . . . T . A . . . . . A C A A . A . C A A . . . G A A . . A ATTTTAAAA . . . . . . . T . GAT . . A . . . . G . T G A . . ATATT A . . C CAT A . . T . . . . . T A . . . TT C . CA . . . . T . . . A T T . A . . . AT A . . . T . . A . TT . . A A . . . . . A . A . . T . . . . A AAA . . A A . CT C A . TAG ATA . A A TCC A CACGTACCG A . A G . . . . . . . . C . . CTT G . . . . . T T T . AT . . C T . A TT . A CT . C . G AT A . ACACTCAAACG A . T . A . . . G
blockSeqs : T C A T ATA T G . A T . T . . . T GATTGT G . G TTT . . . . TATT T . . . . . . A . . . . . A . . . . . . . . . . . . CA C . . . . T . . C . . . . . . . . A . . . . . . . . . . C . T . . . . . . . . . . . G . . A . A . . . . . . . T . . . . GATT T . . C TA A . . T . A . . . A . . . G A . . . T . . . . . . . . A . . . . . . . . . . G . . . . A . . . A . . . A . TG AT . . . T TCT . . . G . . . . . . . . G . . TTA G . . . . . . G . T . . T T . . TG . A AC . T . G GA A . TATGCAA A . T . T . . . G
blockSeqs : C . A . . . . . A A . T . . . T GATTG A . T CCC . . . . TATT . . . . . . . . T . . . . . . . . A . . . . . . . G . . . . . . . . . . . . . . . . . . . A . . G T . . AA . T GC . C . G GA A . TAGGCAA A . T . A . . . G
blockSeqs : . T . T . . . T . . . G T . . TA . T AT . . . G GA . . AATA A . C . A . . . .
blockSeqs : . . . TA . . TT . . . . G . . ATG . . T . C . . .
blockSeqs : . . . . .
blockSeqCons : C* T*** ** T******* ** T** GATTGT *** TCC ** TATT****************** T* A* A* T** G****** ** A****** ** ***** AT TA NT** G* GA NATGCAA********** ***
originalCons : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTTGTGAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTAATG---A------TT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TTTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTT-AA-AGCGC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA----TTAAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCA-A----CG-C---AATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
finalCons : GTAAAGAAATACTTGTATAC-ATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATCT---CGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGCT-------ATGAGAACATGT-CCAAATATGAATTATCTTG-CA--ATAGTATTT--GAGTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACATTATT------------------GGTATCAAGT-TCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TTTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAATA-C-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTT-AA-AGCGC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATGG------GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT-------ATAAAAAAA------AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTNT--AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGCGTAAA-CCANATGCAA----------CACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|26 ): CATAGTATCCACAAATACATTGACTTATTC
Alignments
lowQualScore : 11 11 1111 11 11111111 1111 111 1111 11 66666666666666666 22222 1 1 1 1 1 1 1 1 1 1 222 1 1 33333 22 1 1 1 22 444444 1 2 11 333333 1 2222 555555555555 1 11 1 222222 1111 1 1 1 1 1 1 1 1 1 1 11 1 1 1 11 1 1 1 1 1 1 111 1 11 1 1 1 1 1 1 888888888888888 22222 555555555 1 11 11 1 1 1 1 11 6666666666666 11 222 2222222 44444444444444 11 1 33333 22 111 1 1 22 1 1 6666666666666666666 1 1 2222 1 1 1 22 1111 1 2 11 2222 1 1 11 1 555555555555555555555555 11 33333333 1 1 1 44444444 222 7777777777777777 2222 11 222 222 66666666666 1 1 1 1 11 1 222222 11 1 3333333333 11 111 11 1 1 11 1 1 1 1 1 1 1 3333333 11 11 333333333 444444 111 1 2222 1 11111 2222 1 66666666666 55555555555555 1 1 22222 11 22222 55555555555 1 11 99999999999999999 1 1 11 1111 1111 1 1111111 11111 33333333333 111
lowQualScore : 11 33 3 0 4444 333 1 3 11 0 1 3 6 66666666 6 6 99 5555 999999 1 0 444 99 888 0 0 7777 0 8 8 11 99999999999999999 00000 88 0 0 0 0 0 0 8 3 7 3 2 3 6 777 6 3 3 00000 00 6 5 5 5 00 1 444444 7 3 6 88 444444 7 3 7 0 4444 111111111111 0 33 0 888888 4444 3 0 2 0 0 0 0 0 0 0 0 0 11 1 0 0 0 33 3 3 0 2 0 2 0 0 5 3 0 777 1 0 33 5 0 0 0 0 0 111111111111111 11111 7 7 7 666666666 0 33 55 22 0 3 8 8 0 0 8 3 0 3 0 0 0 33 5555555555555 00 8 111 0 3333333 77777777777777 88 8 2 33 3 0 55555 7 00 7 777 3 3 0 00 5 5 1111111111111111111 0 3 3 8888 3 3 7 3 7 55 8888 6 3 6 88 8888 7 3 2 0 3 2 3 33 0 888888888888888888888888 8 11 8 2 77777777 7 0 0 3 3 88888888 333 0 7 1111111111111111 7 7 8888 88 555 999 6 7 77 55555555555 3 3 3 7 3 11 0 222222 3 77 8 0 8 5555555555 8 0 0 99 88 8 0 8 0 11 111 0 0 8 8 33 0 999 0 33 3 3 0 0 0 0 0 7 0 3 0 8 1111111 11 0 0 0 8 11 0 0 222222222 0 22 000000 0 8 8 444 3 0 99 9999 3 0 77777 0000 0 3 6 11111111111 1 44444444444444 9 0 3 6 0 55555 8 8 0 8 8 11 8 5 00000 0 8 00000000000 2 0 33 66666666666666666 0 0 3 3 66 0 0 8 11 7777 4444 1 1 5 1 22 8888888 5 9999 5 5 5 0 66 1 33333 5 5 5 6 1 77777777777 5 7 5 3 5 000 5 0 1 0
lowQualScore : .. .. . . .... ... . . .. . . . . ........ . . .. .... ...... . . ... .. ... . . .... . . . .. ................. ..... .. . . . . . . . . . . . . . ... . . . ..... .. . . . . .. . ...... . . . .. ...... . . . . .... ............ . .. . ...... .... . . . . . . . . . . . . .. . . . . .. . . . . . . . . . . . ... . . .. . . . . . . ............... ..... . . . ......... . .. .. .. . . . . . . . . . . . . . .. ............. .. . ... . ....... .............. .. . . .. . . ..... . .. . ... . . . .. . . ................... . . . .... . . . . . .. .... . . . .. .... . . . . . . . .. . ........................ . .. . . ........ . . . . . ........ ... . . ................ . . .... .. ... ... . . .. ........... . . . . . .. . ...... . .. . . . .......... . . . .. .. . . . . .. ... . . . . .. . ... . .. . . . . . . . . . . . . ....... .. . . . . .. . . ......... . .. ...... . . . ... . . .. .... . . ..... .... . . . ........... . .............. . . . . . ..... . . . . . .. . . ..... . . ........... . . .. ................. . . . . .. . . . .. .... .... . . . . .. ....... . .... . . . . .. . ..... . . . . . ........... . . . . . ... . . . .
lowQualScore : 22 00 8 8 8888 000 0 2 00 8 7 5 7 88888888 7 7 22 0000 222222 0 8 000 00 444 8 8 0000 8 0 0 00 00000000000000000 00000 88 0 0 0 0 0 0 8 3 3 3 0 3 7 777 7 3 3 00000 77 7 0 0 5 77 0 777777 3 3 7 33 000000 3 3 3 7 0000 222222222222 0 88 0 888888 8888 2 0 5 0 0 0 0 0 0 0 0 0 88 0 0 0 0 88 2 2 0 5 0 5 0 0 5 2 0 555 2 0 88 5 0 0 0 0 0 888888888888888 00000 3 3 3 777777777 0 88 88 55 2 2 0 0 8 8 0 2 0 2 0 0 0 88 0000000000000 22 8 555 8 8888888 00000000000000 88 0 5 22 2 0 00000 3 00 3 777 3 3 7 77 0 5 0000000000000000000 7 3 3 3333 3 3 3 3 3 33 3333 7 3 7 33 3333 3 3 5 0 2 5 2 88 0 555555555555555555555555 8 00 0 5 88888888 0 0 0 2 3 33333333 333 7 3 3333333333333333 3 3 3333 33 777 000 7 3 33 00000000000 3 3 3 3 3 00 0 222222 2 00 0 6 0 0000000000 0 8 8 44 88 0 8 0 8 00 888 8 8 0 0 22 0 000 0 88 2 2 0 0 0 0 0 0 0 2 0 0 0000000 00 8 8 8 0 00 8 8 000000000 8 00 000000 8 0 0 888 2 0 55 5555 2 0 22222 8888 0 2 5 44444444444 0 55555555555555 2 0 2 5 0 00000 0 0 6 0 0 00 0 0 00000 8 0 22222222222 5 0 88 00000000000000000 0 0 2 2 66 8 8 0 66 0000 2222 0 7 7 4 00 6666666 4 9999 7 3 7 7 44 4 99999 0 7 7 6 7 11111111111 0 4 0 4 7 000 7 1 0 2
consensus : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATG-TCCAAATATGAATTATCTT-GCA--ATAGTATTTG--A-GTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACAT---------TAATG---ATT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TTTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTT-AA-AGCGC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT---------ATAAAAAAA--TT--AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-C-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGC----GTAAA-C-CAAATGC----A--ACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
Reference ( family-4284 ) : GTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATAGAATGT--CTCTGCCAGAAGTATATGCAATATAAGTTTTTT-CATTATGC--T-----ATGAGAACATG-TCCAAATATGAATTATCTT-GCA--ATAGTATTTG--A-GTGAAGATTGTAGTTGATGTCATGCAGTCTCTTTAA---AA-NTTTTTTTTCCTGAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACAT---------T-------ATT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTCTTGT-GATTGAATAAACCATTGA-GCATGGAAATGGTT-ACATCCCATGGGAA-N-TACACTCTTAAT-TGAA-TCTTTT-TGTGCATA-TCTGCAATCCTAATACATCACAGACTTGTTGATAATT-AGATAACTTCCATAAGTTCAANTATT-CA-T-TTTTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTTT-TA--TAAATAA-AATTAATAACGATTTTTTTTTTC---GCAATTGTTTA------------TTTT-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTANATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGAAA-CACA---CAGCTGAAAAATA-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---A-GACA------CTAGAATAT-G-T-TGTTTTTGAAGTTTTTAATTTGCAAGCTCCATA--AGT----TG-AATTT--AACTTT-CTTCGTGGCTATGCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTG-ATATATCTATTTGCG--AGTTAGAATCAT------ATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATGC----GCAGGAAGAG-GGTTGACCAGGATAG-A-TTTT-AA-AGCGC-AATATCCCATGGCACCATTTGGTGCTATACACAAGTGATAGC---CT-----ACA----A-ATGCGAAT-TCC-GTA----AGA-TGACAA-TTAG-TCATTCATTTATGC-ATTGAT-CTGTGGCATCCAT-TGTAGTT-TTG--CAGAGG----AAAACT-TTAGGTAA-TGGTTTTGGCATTGACCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAGGTGCAACTTCNTAA--GTCATGGG-AAATTGGTCACTGGTA----TACTAAACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAACAAGCATATATACGTCAAATGAATATCATC------------ATAGCAATACAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT--AAAAAAAC-GCCAATATAACCCCCATGATGACCATCCCAAACGAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATGTT-AAACT----A-ATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATA-GTCCATG-TAGTTTACAAAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAGAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATG-----G-GTATTAAGA--ATTTGAATTAATTTAATT-T--GGGAAACTCT---------ATAAAAAAA------AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---CTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAAAGA--T-GACAA-AT-AA-TACTTGTATG--TC------CGCCCCCCCCCCCCCTTGCGTTCATAGTGNCTTCACTT-TACC-G-AATGACATA-CTGGAAAGTTGGGTG-ATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTTATTA-CCTGAAATTGTAAGT-----GAAATA-TAT-TTAT------ATATCAATCGCCCAGTCGT-AG--GTACATTGGTGG--GT--AA---CT---TCTCGGATTT-GATT-TTTAAAAATATAAGAACTAT-TATTTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-GGTAAGGAATTTA-------TGCTGGCTN-T-AAGTTCGTT-TTCA-CGCTG-TTTTGTGAGC----GTAAA-C-CANATGC----A--ACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|1 : AAATTATTGTATA---TCATAAAGCCC-CACCATTA--GGAAAATGATTGCATCATCTCGAGACATTGAAGTATGTATCTCTGCCAGAA-TATATGCAATATA-GTTT-----ATCATAC--TTCTATATGAGAACATT-GCCAAATATGAATTACCTT-GCATAATAGTATTTG--AAGGGAA-----------ATGTCATGCAGTCTCTTTAATTAAA-ATTCTTTT------AATGGTTCTTCTGATTCA----GAGGTTAGGGTT--AAAG-ATAT-GCTG--TCTCATTGAGGACGCCTACATAATGAATTCC-------ATT-----GTTATCAAGCTTCAAGAC-CACCATTTAC-CCTCA-CTGGACAC-ATTTCTTGTCGATTGAATAAACCATTGA-GCAGGGAAATAGTT-ACATCTCATGGGAA-AGTACACTCTTAAT-TGAA-TCTTTT----GCATACTCTGCAATCTTAATA-ATCACAGA-TTGTTGATAATT-AGATAACTTCCATAAGTCCAATTATT-CAAT-TTCTCACTATGCATGAAATAAAAGATTGTGGACAAAGATATA--GAAACTTT-TG--TAAATAA-A--TAATAATGGATTTTTTTTCC---CCAATTGTTTA------------TTGTGTG--CCCAC------AA-AAGTGATCAATGGTGAGTCAGACAGACTTCAAGTT-GTATA-TATGTACAGTTTTC-GAGTGC-CTCTGAAAGGTAAA-TTTAATAC--AATTACATCT-TGGTTGATT-G--TGATTT--AAACATATCAG-CTATTT-CTTCAGTCAGAGGACCTGAAAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAACA-TTAGT--GGACAAATACATT-CTG-TATTTGTGAAAAG---A-AACATATGATCTAGAATATGG-TATGTTTTTGAAG-TTTTAATTTGCTAGCTCCATA--AATATAGTGAAATTT--AA-TTT-CTTCGTGGC-ATGCTTATCTCT-TTATTGAAATG--AT-TTTTGATTGAAACGAA-AGGTG-ATATG-TTCAA--TGTCGA------------TTTTTTGAATATATCTATTTGCG--AGTTAG-ATCAT------ATATAACACCTGGGTTCAACATG--------------TCCAATAACAACCAGTGCACAAACGAATGCCAAAGCAGGAAGA--GGTTGACC-GGATAG-ATTTTT-AATAGCAC--ATATCCCATGGCACCATTTGGTGCT-TACACAAGTGATAGC---CT-----ACA----A-ATGTGAAT-TCC-GTA----AGATTGACAAGTTAGCTCATTCA-TTATGC-ATTG-T-CTGTGGCATCCAT-TGTAGTT-TTG--CAAAGGAAAAAAAATTATTAGGTAATTGGTTT--GCATTGATCCTTGAGGCTTTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTC-TAA--GTCATGGG-AAAATGGTCA-TGG------TACT-AACTTTTGTACTGCCCATCCACATCCGAGTAGTTGAATGGGCCACATTCTCGTCATAATAGC-CATCAAAACA-TGAATACTTTCAGAAGGAACAG--------CATCTGTATTAACAAGCATATATATGTCAAATGAATATCATCGTGAATATCATTATAGCAATACAGGGATAGATAATGAAAA--TTTAAAAAGAAAGGGAGTGCGTGGGTTGAAACCCA--TTTATACTATCCACCTAAAAAGAGGAGGTTGATGGGGTGT--AACAAATC-G-CAATATAA-CCCCATGATGACCATCCCAAA-GAAGAGGGGTGCCCCCCCGCCCCCCTTGGCTATTCAGTCATTGGGATAATTGAAAG-GGATAACACATCAATGTT-AAACTTTACA-ATTTTTCATTTTTAATCCAGAATTCAAAACTACAATAT-AAC-TATAATT-TGTTGGTGTTTTAATAA----------ATGTACATTTGTC-CTGATGG-ATCAGGAACATAT--GTTCATGTTAGTTTACAAACAAAAATTACAC--ATAATTCTTATTTTTTAAAGAT-T-AATGAACTTTGTAAAACATGATAGGATACGGTTCTAAACTGACAAATAC-GTGGTCAAAAGTATTTTCTTGACATAACAGTTCTTTTGTAAAAAGATACTGAA-CAACACATGCAATATCTATGATTAAAACATTACCATGTTTGATTAAAAGC----G-GTATTAAGA--ATCTGAA-TAAATTAATTATCAGGAAAACTCT---------ATAAATAAACATTTTAAAAAATGCAATGGCAGTTTCAGCGACCAAGAGAAATCACTGTAATTTACAAGTGCTTAGGAT----------TTAATTATCAATCAGGAAG-CTGAACAAAAAGA--T--ACAA-A--GA-TACTTGTATG-----------GCCCCCCCCCCCCCTTGCGTTCATAGTGTCTTCATTTATCCC-ACAATGACATA-CTGGAAAGTTGG--G-ATGTATTG-----TTAGTTAATAAAATCTGTAGAAAACAAAAACCCTTTAATTGTCTTTATTA-CCTGAAATTGTAAGTGTTTCGAAATAGTAT-T--T------ATATCAATC-TCCAGTCGTAAG--GTACATTGGTGGCAGT--AACTGCT---TCTCGGGTTTAGATTCTTTAAAAATATAAGAACTAT-CATTTGTTAACCTGCATCTAATAAATCCA----CTTCTTTCATT----TATGTG-CATC-AG--AGGAATTTA-------TACTGGCTA-TAAAGTTCGTTATTTACCGCT--TTTTGT-AG-----GTAAA-C-CAAATAC----------CAACAAAGC-TGCATATTGAGCAGCTGCCC-GGAAGTAGTAAATCGAAAGT-GTGAAAAGATAAACGAAGATTAGG
gi|10 : acagcccatagaccccggttctgcctataatgtcgttggcccccccctcccgtcagtccgacttcaaatcctggaaatccaccatcaaatttcatattggtttttaT-GATT-TT---AAA-ATAAGAACTAT--ATTTGTTTACTTGCATCT-ATAA-TCCA----CTTTTTCCACT----TGTT-G-CATCAGGTAAGGAATTTA-------TGCT--CTCAC-AAGTTTGTT-TT-A-CCCTGCTTTTGTAAGC----GTAAAGC-CATATGC----A--ACA--ACAAAGCTTGCA-CTTCGACAGCTGCCCGGGAAGTAG-AAATCGAAAGTGG---AAAG-T-AACGA-ACTTAagaccat
gi|11 : AACTAT-TAT--GTTTACCTGCATCT-ATCGA--CAAGGTTTTTTTTCTCT----TCTTAG-CATC-GGTTGGGAATCTAAATAAACTGC-AGCTC-T-GAGT-CG------A-CCCTT-TTATATGCGTACATGTACA-CTCAAACGC----A--A---AACAAAGC-GGCATTATTGTCTGCCGCCT-TGAAGTATTGA-CCGAAATT-G---AAAG-TAAACGAGATTTAGGcaga
gi|12 : TTG-CATC-AGTGAGGAATTTA-------TGCAGGCTA-C-AAGTTTGTT-TTCA-CGCTG-TTTTGTGAGC----GTAAA-C-CA-ATGC----A-----CAACAAAGC-TGCATCGTTGACATCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAG
gi|13 : CT----TTTTTG-CATC-GAAAGGGAACATA-------TACAGGCTG-C-AGGTTTGTT-TTCA-TCTTG-TCATATGAGT----GC-AA-C-CGTAGGC----A--A---AACA--------ATCTTTGACGGCTGTCC-AGAAGCAGT-ATTTGAAAGT-G---AAAG-TGGACG
gi|14 : CCTGCATTCAGATTGACT-CACGT--ACC-G-CATG-CATAACTGGA----TGGATG-AAGTATTT-----TTAATC-AT-AACTC-AAGAAAAAT-CAAACCTTTTAACTA--TTCATTG-CCTAAAATTGTCA-T-----TAAAGA-TAT-T
gi|15 : GTGCAAGTCTATAATAATCATGGGGAAATTG-TCACTAGCA----T--TGAGCTCTTGTACTGCTCATTAATATCTTAGTAGCTGAATGGG-CACATTCCCATCATAGTATC-CACAAATACATTGA
gi|16 : act-TCTCT-TTATTGAAATCATAT-TTT-GG-TGAAAAGAA-AGGTG-ATATG-TTCAA--TGTCATTCCTTCAAATGTTTTTTTT-ATATATATATTTGCATTAGTTAGAATCAT------ATATAACACCTGGTTTCAAc
gi|17 : GTT-AT-AACTC-GTAGAAAAC-AAAACTCTTTAGCTG--TTTATTA-CCGGGAATTGTAAGT-----GAAATA-CAT-CT-T------ATTTCAATCGCCCAGTCGT-GA--GTACATTGG
gi|18 : AAAACATTTACATG-TTGATCAAATGTGCATGTGTATTAAAATAATTTTAATTAATTTAATT-T--GGGAA----C---------ATAAAAAAA------A-----TGCAAT-GCAGTTTCAGCGACC-ag
gi|19 : AGAAGTATATGCAATATAAGTTTTTT-CATTCTGC--T-----ATGATAACATG-TCCAAATATAAATTATCTT-GCA--ATGGTATTTG--A-GTGAAGATTGTAGTTGAT
gi|2 : GTAAAGAAATACTTGCATA-CATCATAAAGCC---ACCATTAAGGGAA--TGATTGCATC---TCGAGACTAAATAGAATGT--CTCTGCCAGAAGT-TATGCA-TATAAGTTTTTT-CATTATGC--T-----ATGAGAACATG-TCCAAATATGAATTATCTT-GTA--ATAGTATTTGTGA-GT-AAGATTGTAGTTGATGTCATGCATTCTTTTTAA---AA-CTTATTTTTTCTGAAATTGTTATTCTGATTTC----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTCCAT---------T-------ATT-----GATATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACCATTTTTTGT-GATTGAATAAACCATTGA-GCATGGAAATGATTCACATCC-ATGGGAA-T-TACACTCTTAAT-TGAA-TCTTTT-TGT-CATA-TCTGCAAATCTAATACATTACAGACTTGT-GAGAATTCAGATAACTTCCATAAGTTCAAATATT--------TTCCCCATGCATGCAATAAA-TATT-TGGACAAAGATATA--GAATTTT---A--TAA-TAATAATTAATAACGATTTTTTTTTTT---GCAATTGTTTA------------TTTT-TG--CC-ACTGTGACAA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAAATTTAATACCAAATTAAATCT-TG-GCAATT-G--TGATTTTTAAACTTATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTACAAAGAGACA-CATA---CAGCTGAAAAATA-ATTGT--GGACAA-TA-ATTTCTG-TA-TTGTG-AAAG---------------CTAGAATAT-G-T-TGTTTT-GAAGTTTT-AATTTGCAAGCTCCATA---------TG-AATGT--AACTTTTCTTCATGGCTATTCTT-TCTCT-TTATTGAAATAATAT-TTTTGG-TGAAACGAA-AGGTG-ATATG-TTCAA--TGTCG-------------TTTTTTA-ATATATCTATTTGCA--AGTTAGAATCAT------ACATAACACCTGGTTTCAACATG--------------TCCAAT-AC-ACCAGTG-ATCAAC-AATG-----ACAGCAAGAGAGGTTGTACAGGATAG-A-TTTT-AA-AGCAC-AATATCCCATAGCAC-ATTTGGTGCTATACACAAGTGATAGC---CTTTGTTGCATTTGACATTTGAGT-TTCTGTA----AGA-TGACAA-TTAG-TCATTCATTTATG---TT-ATGTTGTGGCATCCAT-TGTAGTTCTTG--CAGAGG----AAAACT-TTAG-TAA-TGGTTTTGGCATTGACCCTTGAGA--TTTAGATC-CTTTA----------G-ATT---------AAGGTTCAACTTCATAA--GTCATGGG-AAATTGGTCACTGGTAGTGGTACTAAACTTTTGTACTGCCTATCCACATCCGAGTAGTTGAATGGG-CACATTATCGTCATAATAGCGCATCAATACATTGAATAC-TTCAGAAGGAACAG--------CATCTG---TAAGAAGCATATATATGTCAA-TGAATATCATC------------ATAGCAATAAAGGGATAGATAATGAAAATCTTTAAAAAGAAAGGGAGTGGGTAGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--AGGTGTAAAAAAAAACAACCAATATAACCCCCATGATGACCATCCC-AACAAAGAGGGGTG------------CCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAATATTAAAACC----A-ATTTTTCATTTTTAA--CAAAATTCAAAACTACAATAT-AACATATAAGT-TGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGG-GCG-ATA-GCCCATG-TAGTTTAC-AAC-AAAATTACAC--ATATTTAT--TTTTTTAAAGACAT-AAGAAGCTTTGTAACA-ATG-CAGGATACAG----AAA-TG--AAATACAGT-GTCAAAAGTATTTTC-AGACGTAACA-TTC-TTTGT-AAGGGATACTGAACCAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCACATG-----T-GTAGTAAGA--ATTTGAATT-ATTTAATT-T--GGGAAACTCTAAAAAAAAAAAAAAAAAA------AAAAAATGCAAT-GCACTTTCAACAA-C-AGAAAAAT-G-TGTAA-TTACAAGTGTGTAGGATTAATTTAGGATTAATTATCAATCAGGAAGACTG-ACAAAACAA--T-GACAATTT-AA-T-TTTGTATGATTCACACAGTGCCCCCCCCCCCCCTTGCGTCCATAGTGACTT--CT---------AATTCCATA-CTGGAAAGTTGGGTG-ATGTTTTGTTATATTATTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAATTG--TTTATTA-TCTGAAATTGTAACT-----GAAATA-TATCTCATAAAGTCATATCAATCGCCCAGTCGT-AG--GTACATTAGTG--------------------CGGATTT-GATT-TTTAAAAATATAAGAACTAT-GAATTGTTTACCTGCATCT-ATAAATCCA----CTTCTTCCACT----TGTTTG-CATC-AGTAAGGAATTTA-------TGCTGGCTA-T-AAGTTCGTT-TTTA-CGCTG-TTTTGTGAGC----GTAAT-C-CAAATACTGTTAATACACAACAAAGC-TGCATCTTCGACAGCTGCCC-GGAAGTAATAAATCGAAAGT-G---AAAG-TAAACGAGACTTAGG
gi|20 : GTAA-TGGTTTTGGCATTGATCCTTGAGG--TTTAGATC-CTTTA----------ATATT---------TAAGTGCAACTTCTTAA--GTCATGGG-AAATTGGT
gi|21 : atgtaTCAGGAAAACTG-ACAAAAAGA--TAGACAA-ATAAA-TACTTATATG--
gi|22 : CACAACAAAGC-TGCATCTTTGACAGCTGCCC-GGAAGTAGTAAATCGAAAGT-G---AAAG-TAAACGAGattcacacagtgcccctttcctgcct
gi|23 : aattACATCTGGTTTCAACATGACACTAGCTAGATGTCCAAT-AC-ACCAGTG-ATCAAC-AA
gi|24 : g--AGTTAGAATCATTCATCTATATAACACCTGGTTTCAACATG--------------TCCAAT-AC-A
gi|25 : -AATTT--AACTTC---TCTTGGTTATGCTT-TCTCT-TTATTGAAATAATAT-TTT
gi|3 : TAAT----ATAACTTGCATAAGTTCAAGTATTTCA-TATTTTCCCCATGC-TACAATAAA-TATTCTGGACAAAGATATACCGAATTTTTGTAAATAAATAA-AATTAATAATGATTTTTTTTTTTAGGGCAATTGTTTAGCATTGTTGTATTTTT-TGGGCC-AC------AATA--TA--CAATG-TGAGTCA-A-AGACTTCAAGTTTGTATACTATGTACAGTAT-CGTAGT-CGCTCTGAA-GGTAAA-TTTAATAGGCAATTAAATCTGTG-TTAATTTGATTGATTTTTAACTATA--AGGCTATTTCCTTCAGT-AAGCGAC-TG-AAAACTGTACAA-GAGAAAACCCAGAGCAGCTGAAAAATACATTGTTGGGACAA-TA-TTT-CTGGTA-TTGTT-GAAGCATATGATA------CTAGATAAT-GGT-TGTTTTTGACGTTTTTAATTTTCAAGCTCCATGATAGT----TG-AATTTTAAAC-TT-CTTCGTGGCTATGCTT-T-TCTGTTATTG----AATATATTTTGA-TG-AACGAAGAGGTGAATATGCTTCAATGTGTCG-------------TTTTTTG-AAATAT---TTTGC---AATTAGAATCAT-------TATAAACCCTGGTTTCAACATG--------------T-CAAT--C-A-CAGTG--TCA---AATGC----GCAGG-AGAG-GGTTGACCAGGATAGCA-TTTTAAA-AGAGCAAATATCC
gi|3 : GATAGCATTTT-----AAA----A-GAGCAAATATCC-ATAGACAAGA-TGAAAA-T-AG-TCATTCATTTATGTTATTGAT-CTGTGGCATC-ATATGTAGTTATTGGGCAGAGG----AA--CT-TTAAGTAA-TGGTTTTG-CATTG-CCCTTGAGA--TTTACATCGCTTTAGATTAGGTGCACATTCTTAAGTCATAGGTGCAACTTCTTAA--GTCATGGG-AAATTGGTAACTGGTA------CTAAACTTTTGTACTGCCCATTCACATCCGAGTAGTTGAATGGG-CACATTCTCGTCATAATAGC-CACCAATACATTGAATAC-TTCAGAAGGAACAGTGCTGGCTCATCTG---TAACAAGCATATATACGTCAAATGAATCT--------------------TAATACAGGGATAGATAATGAAACTCTTTAAAAAGAAAGGGAGTGGGTGGGTTGAAACCCAAGTTTATACTATCCACCTAAAAAGAGG----TGA--GGGTGT----AAACAT-TTCAATATAACCCCCATGATGACCATCCCAAACAAAGAGGGGTG----------CCCCTT-GTTATTCTGTCATT-GTATAA-TGAAAGTGGATAA-ACATCAA---T-AAACT----A-A------ATTTTTCAC-AAGAATTCAAAACTACAATAT-AACATATAAGA-TGTGGGTGTTTGAATGAATGTACGTACATGTACA-TTGTCTCTGATGGCATCAGGAGC--ATA-GTCCATA-TAGTTTACAAAC-AAAATTACACATATATTTA---TTTTTTAAAGAT-TAAAGGAGTTTTATatagacaagatgaaaatagtcattcatttatgttattgatctgtggcatcatatgtagttattgggcagaggaactttaagtaatggttttgcattgcccttgagatttacatcgctttagattaggtgcacattcttaagtcataggtgcaacttcttaagtcatgggaaattggtaactggtactaaacttttgtactgcccattcacatccgagtagttgaatgggcacattctcgtcataatagccaccaatacattgaatacttcagaaggaacagtgctggctcatctgtaacaagcatatatacgtcaaatgaatcttaatacagggatagataatgaaactctttaaaaagaaagggagtgggtgggttgaaacccaagtttatactatccacctaaaaagaggtgagggtgtaaacatttcaatataacccccatgatgaccatcccaaacaaagaggggtgccccttgttattctgtcattgtataatgaaagtggataaacatcaataaactaaatttttcacaagaattcaaaactacaatataacatataagatgtgggtgtttgaatgaatgtacgtacatgtacattgtctctgatggcatcaggagcatagtccatatagtttacaaacaaaattacacatatatttattttttaaagattaaaggagttttat
gi|4 : taatataacttgcataagttcaagtatttcatattttccccatgctacaataaatattctggacaaagatataccgaatttttgtaaataaataaaattaataatgatttttttttttagggcaattgtttagcattgttgtattttttgggccacaatatacaatgtgagtcaaagacttcaagtttgtatactatgtacagtatcgtagtcgctctgaaggtaaatttaataggcaattaaatctgtgttaatttgattgatttttaactataaggctatttccttcagtaagcgactgaaaactgtacaagagaaaacccagagcagctgaaaaatacattgttgggacaatatttctggtattgttgaagcatatgatactagataatggttgtttttgacgtttttaattttcaagctccatgatagttgaattttaaacttcttcgtggctatgcttttctgttattgaatatattttgatgaacgaagaggtgaatatgcttcaatgtgtcgttttttgaaatattttgcaattagaatcattataaaccctggtttcaacatgtcaatcacagtgtcaaatgcgcaggagagggttgaccagAAACTACAATATTAAC-TATAAGTATGTGGGTGTTTGAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAGCATATAAGTCCATG-TAGTTTACAAAC-AAA-TTACAC--ATATTTAT--TTTTT-AAAGAT-T-AAGAAGCTTTGTAAAA--TG-TAGGATACAGTT-TAAA-TG--AA-TACAGT-GTCAAAAGTATTTTC-TGACGTAACA-TTC-TTTGT-AAG-GATACTGAA-CAACACATGCA-TAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATTTGAATTAATTT-ATT-T--GGG-AACTCT---------AT----AAA------AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAAAAAT-A-TGT-A-TTACAAGTG-----------CTTAGGATTAATTATCAATCAGGAAGACTA-ACAAAAAGATGT-GACAA-AT-AGTTACTT-TGTA--TC------CCCCCCCCCCCCCCCTTGCGTTCATAGTGTCTT--CTT-TACCAA-AATGACATA-CTGGAAAGTTGGGTGAATGTATTG-----TTAGTT-AT-AAATC-GTAGAAAAC-AAAACCCTTTAACTG--TTATTTATCCTGAAATTGTAAGT-----G-AATA-TAT-TTA-------ATATCAATCGCCCAGTCGT-AGGTGTACATTGGTGGA-GTTAAA---CTGCATCTCGGATTT-GATT-TTTAAAAATATAAGAACTATATATTTG-TTACCTGCATCT-ATAAATCCA----CTTCTTCCACTTGTGTGTTTGCCATCAAGTAAGGAATTTT-------TGCTGCCTT-T-AAGTTCTTT-TTCA-CGCTG-TTTTGTG-GC----GT-AA-C-CAAAT---------ACACAACAAAGC-TGCATCTT-GGCAGCTGCCC-GGAAGTAGTAACTCGAA
gi|5 : tactttcaagaagatTGTAAAGCATCATAAAGCCGGCACCATTAGGG--AAATGATTGCATC---TCGAGACATAATAGAAT-T--CTC-GCGAGAAGTATATGCAG-ATAAGTTTTTT-CATTATGC--T------TGAGAACATGTTCCAAATATGAATTATCTTGGCA--ATAGTATTTG----GTGAAGATTGTAGTTGATGT-ATGCAGT-TCTTTAA---AA-GCTTTTTTTCATGAAATTGTTATTCTGATTTTATTCTAGGGTATGGTTTAGAAGAATATAGCTGCATCTCATTGAGA--G-CTACAT---------TAATG---ATTATTGGGGCAT-AAG--TCAAGACGCAGC-TTTACGC-TCAGCAG-ACACCATTTCTTGT-GATTG-ATAAACCATTGAGGCATGGAAAT-GTT-CCATTCCATGGGAATC-TACA--TTTAATATGAATTCTTTTCTGTACAT--TCTG-AAT
gi|6 : tgtcgtgccccccgtccaacttcaaatcctggatccaccatcaaattttcagtattgggttattaacattcatttcT-AAACT----ACATTTTTCATTTTTAAT-CAGAATTCAAAACTACAATAT-AACATATAATT-TGTGGGTGTTTTAATGA----------ATGTACA-TTGTCTCTGATGGCATCAGGAACATATA-GTTCATG-TAGTTTACAAAC-AAAATTACAC--ATATCTAT--TTT-TTAAAGAT-T-AAGAAGCTTTGTAAAA-ATG-TAGGATACGGTTCTAAA-TG--AAATACAGT-GTCAAAAGTATTTTC-TGACATAACA-TTC-TTTGT-AAAAGATACTGAA-CAACACATGCAATAT-TATGATTAAAACATTTACATG-TTGATCAAATA-----G-GTATTAAGA--ATCTGAATTAATTTAATT-T--CGGAAACTCT---------ATAATAAAATTTT--AAAAAATGCAAT-GCAGTTTCAGCGACC-AGAGAAAT-A-TGTAA-TTACAAGTGCTTAGGAT---gt
gi|7 : TAAAATAATACTTGTATA-TATCATAAAGCCC-CACCATTAAGGGAAAATGATTGCATC---TCGAGACATAATATAGTAT--CTCTGCCAGAAGTATATGCAATATAAGTTTATT-CATTATGCTAT-----ATGAGAACATG-TCCAAATATGAATTACCTT-GCA--ATAGTATTTG--A-GTGAA----------GATGTCATGCAGTCTCTTT-----AA-TTTTTTTTTTTTTAAATTGTTATTCTGATTTT----CAGGGTATGGTTTAGAAG-ATAT-GCTGCATCTCATTGAGA--GCCTACAT---------TAATGATCATT-----GGTATCAAG-TTCAAGAC-CAGC-TTTAC-C-TCA-CTG-ACACAATTtaat
gi|8 : gtccgacttcaaatcctggatccacccatcaaattttcaatattggttatGTAAAGAAATACTTGTATA-CATCATAAAGCCC-CACCATTAAAGGAAAATTATTGCATC-----------------AATGT--CTCTGCCAGACGTATACGCAATATAAGTTTTTTTCAATATGC--T-----ATGAGAACGTG-TCCAAATATGAATTATCTT-GCA--ATAGTATTTG--A-ATGAAGATTG-AATTGATGTCATGCAGTCTCTTTAA---AACATTTTTTTCCCTGAAATTGTTA---TG---TT----CAGGGTATGGCTTAGAGG-ATAT-GCTGCATCTCATCGAGA--GCCTACAT---------T-------ATT-----GGCATCAAG-TTAAA
gi|9 : cagcccatagaccctctgcctcacccccttcaacttcaaatcctggatccacccatcaaattttcaatattggttattaaaattcattctAATTGTTTA------------TTTG-TG--CC-AC------AA-A--TGATCAATG-TGAGTCAGA-AGACTTCAAGTT-GTATA-TATGTACAGTAT-C-TAGT-C-CTCTGAA-GGTAAA-TTTAATACCAAATTACATCT-TG-TTGATT-G--TGATTTTTAAACATATCAG-CTATTTCCTTCAGT-AGAGGACCTG-AAAA-TGTAC-AAGAGAAA-CACA---CAGCTGAAAAAAC-ATTGT--GGACAAATA-ATT-CTG-TA-TTGTG-AAAG---
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|26 ): CATAGTATCCACAAATACATTGACTTATTC