lowQualScore : 1111111111111111111111111111111111111111111
lowQualScore : 666666666 2 11 1 11 1 222 1 33333 1 1 1 1 1 1 1 1 1 22222222 1 11 11 11 11 444444 1 3333333333 11 1 22222 111111 1 222222 111 1111 6666666 22 2 1 1 22 11 3333 1 11 11 1111 11 11 1 22222 1111 11111 11 33333333 1 222 1 11 1111 2 1 1 222 22 111 222222 1111111111111111 111 11 22222222 111 111111 1 33 11 0000000000000000000000000000000000000000000 22222 111 11111 11 1 11 1111 1 1 333333333 11111111 1 11 11 11 11 1 2222222222 11111111 44444444444444444444444444444 333333333 11 111 11
lowQualScore : 1 3 777777777 0 33 3 2 0 33 8 5 2 3 444 0 3 0 33333 3 7 3 77 3 7 2 6 3 7 1 0 2 0 2 0 0 3 66 0 3 99999999 0 11 8 11 6 11 11 8 7 7 3 444444 3 1 1 7777777777 6 7 7 7 00 3 6 66666 444444 3 888888 1 777 0000 5555555 77 0 6 8 2 2 6 8 88 9 0 0 2 6 99 0 0 33 0 5555 8 0 5 6 33 6 11 7777 11 11 8 0 55555 3 6 7777 6 6 66666 0 3 33 0 00 6 66666666 2 0 2 000 0 00 7777 0 0 0 777 2 33 444 333333 8 8888888888888888 8 8 1 444 5 11 99 5 11111111 8 000 333333 3 0 8 6 00 33 6666666666666666666666666666666666666666666 88888 444 88888 66 7 3 33 3333 3 7 3 555555555 0 11111111 8 0 8 0 3 88 8 8 55 8 66 00 3 0 11 6 6 9 6 99 6 3 9999999999 77777777 33 44444444444444444444444444444 6 6 99 888888888 8 8 11 8 222 8 8 3 8 0 3 5 8 44 0 3
lowQualScore : . . ......... . .. . . . .. . . . . ... . . . ..... . . . .. . . . . . . . . . . . . . . .. . . ........ . .. . .. . .. .. . . . . ...... . . . .......... . . . . .. . . ..... ...... . ...... . ... .... ....... .. . . . . . . . .. . . . . . .. . . .. . .... . . . . .. . .. .... .. .. . . ..... . . .... . . ..... . . .. . .. . ........ . . . ... . .. .... . . . ... . .. ... ...... . ................ . . . ... . .. .. . ........ . ... ...... . . . . .. .. ........................................... ..... ... ..... .. . . .. .... . . . ......... . ........ . . . . . .. . . .. . .. .. . . .. . . . . .. . . .......... ........ .. ............................. . . .. ......... . . .. . ... . . . . . . . . .. . .
lowQualScore : 0 7 333333333 0 88 0 5 0 88 8 5 5 2 000 0 2 8 33333 3 0 3 77 3 3 0 7 3 3 0 0 5 0 5 2 0 2 55 0 5 88888888 0 00 0 00 6 00 00 0 3 3 7 333333 3 0 0 7777777777 7 3 0 3 77 3 7 00000 777777 3 777777 0 777 0000 0000000 55 0 0 2 5 5 0 0 66 8 0 0 5 5 66 6 8 00 2 0000 3 7 0 7 88 5 00 0000 00 00 2 0 00000 2 5 0000 0 0 00000 8 2 22 2 88 0 22222222 5 0 5 888 0 22 8888 0 0 0 222 5 88 000 000000 0 4444444444444444 2 0 4 222 0 66 00 0 66666666 0 000 222222 8 8 0 0 00 88 8888888888888888888888888888888888888888888 22222 888 55555 55 3 3 33 7777 3 3 3 444444444 8 88888888 0 8 0 8 2 00 0 0 88 0 22 66 2 8 22 0 7 0 7 88 7 5 7777777777 77777777 22 88888888888888888888888888888 7 7 55 888888888 0 0 00 0 222 0 0 8 0 8 8 0 0 00 8 8
consensus : GCTCTTTNCGAAGGA------CTCTTTATCTCATGCCAGAG--CCGAGAATGTNACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCA-CTCCTGTC-GGAAATCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCCTGACG-TAGAACCGGAGGCTGACACCATCATCAT-TGATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAG-ACCTTTGGGGAAT-ATGCAGTAC-TTGATGTNC------T-CC-AGCCATGC--A-AGGT--TGTTTGA--CC--GAGTAC-AACAGGACGGACATCGTGTTTGATGTCNATCAGCCATCGAGTCT-GAG-GCTG-AAGCTAGGTCAAAGCGAGGACGTGG----AG----ACGCAGGGTGACAGAGAAGGGCAAAGTTCCCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--AGTTGTTCAACT-CCTGGCTGAC-AAGATTG--CA--GATGGCTGCACCAAAGATGGTCA-T-GTGACCAAAAAAAGAAGATGCTCTATTATGTGAGCAACCATGCCCTATCAACCTGCGCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGTCAAAACGCGAGATGGATTCCAGTACATGACCCGT--GCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGTGTGGCAA--------ACCTGGGATG-TNTGTGACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCA-GTACC-CACCAGCAAGTAGATG--ATGA---CC------TC-GAGACCTTNGAGAAGT---TCGTGGT-CAT--GATGTACGACAGGTCCAGTACA--GCTGATGGT----GTT-GA-T-GA-TGC--CAGGATGGACATG-TTTGCTCGGAAAG--CAGAGA-----------CC----------AT--------TCC------TCCTACTCG----AGCAG-CTC--T--ACT-GCAGCATGCGAAGCGTGCTGCCTACCAGGCCGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCTC-C-A-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAATGT-CAGAATGCCGTG-GACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-AG-ATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
Reference ( gi|1 ) : GCTTTTTCCGAAAGAACTGTCCTCTTTATCTCAT-CCAGAG--CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCA-C-CCTGTC-GGAAATCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCAT-TGATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAG-ACCTTTGAGGAAT-ATGCAGTAC-TTGATGTTC------T-CC-AACCATAC--A-AGGT--TGATTGA--CC--GAGTAC-AACAGGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GA--GCTG-AAGCTAGGTCAAAGCAAGGACATGG----AG----ACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAGACAGTTGTTCAATTTCCTGGCTGAC-AAGATTG--TA--GATGGCTGCATCAAAGATGGTCA-T-GTGACCAAAAAAAGAAGATGCT-------GTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCACGGAGAAGCTGACATCCGGATCTTTCTGCA-TGCCAAACATGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-AGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTAGGCCAAGGACAGAACACGAGATGGATTACAGTACATGACCTGT--GCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TAGCTGCAATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTAGCAA--------ACCTGGGATG-TGTGTGAGGAGGCT-TCTGATGT-CTTCAGCAAACTC---AG-CA-GTACC-CACCAGCAAGTAGATG--ATGA---CC------TC-AAGACCTTGGAGAAGT---TTGTGGT-CAT--GATGTACGACAGGTCCAGTACA--GCTGATGGT----GTT-GA-T-GA-TGC--CAGGATGGACATG-TT-GCTCG--AAG--CAGAGA-----------CC----------AT--------TCC------TCCTACTCG----AGCAG-TTC--T--ACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATGTGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAA-TCCCACCGA-C----TA-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCTG-C-A-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGAGTGCCGTG-GACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-AA-ATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-T-ACAGTGTACATACAC
gi|4 : GCTCTTCTCGAA-GA-------TCTTTATCTCATGCCAGAG--CCGAGAATACGACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCA-CTCCTGTC-AGAAATCCCAGCTTACTACCATGCTT-----GAGACCCATGTTACCATCCCTGACG-TAGAACCAGAGGCTGACACCATCATCAT-TGATGGTTCGACACCAGTGAAT-AGTCTGCCACCAAGG-CCCTCGAAG-ACCTTTGAGGAAT-ATGGAGTAC-TTGATGTGC------TTCC-AACCATGC--A-AGGT--TGTTTGA--CC--AAGTAC-AACAGGACGGACCTCGTGTTTGATGTCTATCAGCCATCGAGTCT-GAAGGCTG-AAGCTAGGTCAAAGCGAGGACGTGG----AGCCAGACGCAGGGTGAAAGAGAAGGGCAAAGTTCCCTCAATCTGGCGGAACTTCCTCCGA-GGCAATGACAA-AAAACCGAG----TTGTT---------GGCTGAC-AATATTG--CACAGATGGCTGCACCAAAGATGGTCA-TTGTGACCAAA----GAAGATGCT-------GTGAGCAACCATACC--ATCAATTTG-GCTGAGGTGACTCCTTGTAGCCATGAAGAAGCTGACACTCGGATCTTTCTGCA-TGTCA----CGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGTAGCTGTGGACTG
gi|6 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccaGCTTTTTCCGAAAGAACTGTCCTCTTTATCTCAT-CCAGAG--CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCA-C-CCTGTC-GGAAATCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCAT-TGATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAG-ACCTTTGAGGAAT-ATGCAGTAC-TTGATGTTC------T-CC-AACCATAC--A-AGGT--TGATTGA--CC--GAGTAC-AACAGGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GA--GCTG-AAGCTAGGTCAAAGCAAGGACATGG----AG----ACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAGACAGTTGTTCAATTTCCTGGCTGAC-AAGATTG--TA--GATGGCTGCATCAAAGATGGTCA-T-GTGACCAAAAAgagaatacaagagaaattctcttctttcatgccttcactggctgcgatgttgtctcaacattccgtgggaagggaagaagtcggtgtggcaaacttgcacacctgggatgtctgtgacgaggcttctgatgtcttcagcaaactcagtcagtacccaccagcagtagatgaccttgagacagtcaatgatcatcgaatatacgacaggtccagtacagctatgtgttagatgaagcagaatggacagttgctcggaaggcagagacccatatgaggccattcctcctactcagacagctccatactggcagc
gi|7 : atgatgacctgggaacagaagcactcccagctggctcaggagttccagagagggaaatttgtagtacacaaaacaggttgatacttctcagcaaatggccatcgaccaagctcatgagcaggtcaatgctgtctcaaggctgatgggaagcaatcagtgtgactgaagatccatcagcactgaggaagaggatggtagctggtccgaagtcagccacttggttgaacagtatgaggcagcagctggaaccaaagagcacactgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaagctcccccaaaccatgacagatatgggcaatccattccaagaagcaagccgagactgttttcattggacacaaggacattgcccaccacactgcagctgaactttttggcacacaccacgagaaaggaagggtgcgattccagcagttcatgcatggactagaggtgagagaaccaccttctatgacccaatcaagaagaaccaggtaaGCTCTTTGCGAAG--------CTCTATATCTCATGCCAGAA--CCGAGAATGTGACCTCACTG----------------TGAGAACCAAACATTCCCTGCTACCCTGAGTGA-------AAGCTTCAAT-CCTGTC-GGAAATCCCAGCTTACTACCATTC
gi|5 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccaCTCTTTATCTCAT-GCAGAAGACCTAGACTGTTGAATCCCTGCCATTCTTTCAGCAGATGAGAACCAGGCATTCCGGGCTGCCCTTAGTGA-GTTGGAAAGC-TCA-CTCCTGCCAGAAAATCCCAGCTTAC-ACTTTCCTTTATTAGAGACCATTTT-ACCATCCCTGACGATAGAACTGAAGG-TGACACCATCATCATGGGATGG-TCA-CACTA-TGAATGAGTC-GCCACCAAGGTACCTCGAAGAAACTTTAGCGAAT-ATGCAG-ACATTGATGTTT------T-CCGAGCCATAC--AGAGGT--TATTTGA--CC--AAGTACAAAAAGGACGGAAA-CGTGTTTGA--TCGATCAGCCATCGAGTCTGGAG-GCTGAAAGCTAGGTCAAAGCGAGGACGTGGAGTCAG----ACGCA--GTTACAG-GAAGTGCAAAATTCCCTCAAAC-GG--GAACTTCCTCCGAGGACAATGACAACAAACCG-----AGTTGTTCAACTGCCTGGCTGCCAAAGATTGCACA--GATGGCTGCACTAAAGATGGTCATT-GTGACCAAAGAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|3 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataactttttccgacaggaactgtgcctcagttggtgcaatcaagggaaaaggtgctgaaggaggactgccagcttcttcaagG-ACCTC-AAG-AC--TTGGAGAATCATGC--T-C-ATGATGTACGACAGTT-CC-AGACATGCTGA-TGGTGTTGATTGATGCCAGGAGTAC-A
gi|7 : gaaaagaagatgctctattatgtgagcaaccatgccctattaacctgcgctgaggtggctccttgtagacatgaagaacgaacccggatcttcttgcattgccaagcagccacagaagaagagcagcaaaaatactcatggtaaagcagcgacaaaatgttctggtctcagcagtgagtttctgccaaccctccattgagattgttctgagcagctgttgattgtcttgcctctcccttgtactggagaatggacagacggaattctctgcctccgccttacaggatggctcgatgtgctgtctcagcattccgtgggaagggaagtcgtgtggcaaacctgggatgatgtgtacgaggctgtctgatgtattcagcaaactttcaagcgagaccgcaccagcagtagatgtgatC--A-AGGT--TGTTTGA--CC--AAGTAC-AACAGGACGtgtttgctcgaagagcagagaccatacgaggcatcccctactcggcaggctctactacagcatgtgaagcgtgctgccaccaggccggcctgcataggagtcagtcgatggatattttcaaccagaaacacaatgccaccgatctgggctggaccaagaaaggcgatctgtggcagatcttctggacggactccacctattcagagagctgtcagcaactcaccagtgtagagaagtcagaatgccgtgaacgagcaaatgctaccgttttgtctgaccttacagctgtgagatgcacatgtagactgagagttctaaactcacctttctgcacacgatgtcaaatatgaaacagtgaacttgctgtttactggtacaggtacatacactatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|3 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntAAAAGAAGATGCTCTATTATGTGAGCAACCATGCCCTATTAACCTGCGCTGAGGTGGCTCCTTGTAGACATGAAGAA--CGA-ACCCGGATCTTCTTGCATTGCCAAGCA-GCCACAGAAGAAGAGCAGCAAAAATACTCATGGT-AAAG-CAGCGACA-AAATGTTCTGGTCTCAGCAGTGAGT-TTCTGCCAACCCTCCATTGAGATTGTTCTG--AGCAGCTGTTGATTGTCTT
gi|15 : gCTGAGTTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCGTGCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTATTCATGGTCAAAGTCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGCTTTGTCTGC-AGCAGCTGTGGATTGCCTT------AGGACAACACACGAGATGGATTCCAGTACATGCCCTGT--GCCTCTCCCTTGCA--ATG----GAGAA--GA--CCgcctctcccttgtactggagaatggacagacggaattctctgcctccgccttacaggatggctcgatgtgctgtctcagcattccgtgggaagggaagtcgtgtggcaaacctgggatgatgtgtacgaggctgtctgatgtattcagcaaactttcaagcgagaccgcaccagcagtagatgtgatgacctcaagacttggagaatcatgctcatgatgtacgacagttccagacatgctgatggtgttgattgatgccaggagtacatgtttgctcgaagagcagagaccatacgaggcatcccctactcggcaggctctactacagcatgtgaagcgtgctgccaccaggccggcctgcataggagtcagtcgatggatattttcaaccagaaacacaatgccaccgatctgggctggaccaagaaaggcgatctgtggcagatcttctggacggactccacctattcagagagctgtcagcaactcaccagtgtagagaagtcagaatgccgtgaacgagcaaatgctaccgttttgtctgaccttacagctgtgagatgcacatgtagactgagagttctaaactcacctttctgcacacgatgtcaaatatgaaacagtgaacttgctgtttactggtacaggtacatacactatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|2 : CCATGTAGAAGCTGACACCCGGATTTTTCTGCA-TGCCAAGCACACAGCAGAAAAAG-GCAGC-AAAGTACTCATGTTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCATCCA-TGATATTGGTCTGC-AGCAGCTGTGGATCGCCTTTGACCAAGGTCAGAACACGAGATGGATTCTAGTACATGACCCGT--GTCTCTCCCTTGCA--CTG----AAGAA--GA--CCAGA-GGAATTCT-CTT-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAA--------ACCTGGGATG-CGTGTGACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCA-GTACC-CACCAGC-AGTAGATG--ATGATGCCC------TC-AAGACTTTGGAAAAGT---TCGTGGT-CAT--GATGTACGACAGGTCCAGTACA--GCTGATGGT----GTT-GA-T-GA-TGC--CAGGATGGACATGTTT-GCTCGGAAAG--CAGAGA-----------CCATACGAGGCTAT--------TCC------TCCTACTCG----AGCAG-CTC--T--ACT-GCAGCATGTGAAGCATGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAAGTCCCACCGA-CTGCATG-GGGCTGGAC-CAAAA--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAACTGCC-A-CCTATTGCA-GAGAGC-TGTCAACAACTCAACAAGTGTGGATG-CAA-GT-CAGAATGCCGTG-AACGAT-GCA-AATGCTATGGTAACC--GTT---TT-G-GTCTGACCT---------GTACTGGACTGTGC--A---GC-TGT-AG-ATGCGGAATGTAGAC-A-TGTAG--ACTAA-GAATTC-T-ACCTCACCTATCTGCACA-CGA-TGTCGAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T---AGTGTGCATACAC
gi|13 : gaccaatagagtggatgttgaggcacaaccagggcacactggtgacaccaTTCAGCA-TACCAAGCATGCAGCAtatacgtaataaatcttgtaactgttgtgttcaatgtgtattttgttcattttttgctaaaaggtggtacaaagaagccctaaaacgaattcaaagctataaatttcactttcccatggtcaaaaacatgaattgacaccaaatcatgccaaatcggtccagttcttggtttcctatgccagataatggggcatcttgaaaaatagcggccatattgaaattcaagtggctatatgggtttcttatagcaagttgtccaaggacattatgcaaatttgtgtgcttgtttcctgatgtgataagattttttgcagctatctgcatgcttcactac
gi|8 : ttctgatgttatgaatgtgtttcaaaaatcaagtatacagtgtatatcctcctgtactggatgaccattatattgatatcgtccagatatatgttgtcattgttgtgtctctgtatgattggtcttcaaatgttgaagccatattcaatatgcttggaaggaagcaacgttcatttgatgttatcccacctacaaaagcatcattgaATACAGATGTTTTCGTGATTGCTGTAAACGTTTT---------CCA------TTGG-CTGAGAGAAGCTTTGGCTTGAGTTCAGTCAGGGTAAAAATGTTAGATCGATTCCTGTTCATGA--TGTTAG--------TAGCAGGTTGAGCCGAGAA--GAGTCTGCT-GGTATTTTAT-T-TTTTCATGCCTTTTC----TGGTTGTGATAACT--TGTC--AGGTTTCAAAGGCAAAGGGGAAAAGTCTTTATGGCAA--------A-------TA-TTTGTCCTGATGCT-ACTAATGTGTTTCAAAAAATTG---AG-TATATATT-CCCCGGTAC-TGGATGG-ATTA---CCATGCTATT-GATATCATCCAGATGTATGTTGTG-T-CTT----TGTATGATAGGCCTAGT------CTTGTCGCAAAAGTT-GA-T-GA-GGC--CAGATTCGACATG-TTTGCAAGG-AAA--CAACGT-----------TC----------AT--------TTGATGTTATCCCACCCACAAAAGCA--TCC--TTGATT--CAGCATACTTAGCGTGCAGCATATCAAGCTGG-TTGTATATGGGCTCAGACATTGG-CA-TGTTTAATGGAAGAAATAAG-TCCCTCTGA-T----TA-GGGTTGG-----AAGCTAAAGGTTAATGTATAGACAG-TTGTATGGTCTGAGCTT-C-ATCCGATTGCT-GAGTCA-TGCAAGCAGCTTCCAAAATGTGGATG-TAA-GC-AAGAATGTCGGT-GCCGAT-GTA-AGTGCT------------TTGAGTT-GAGTTTGCCGT---------GTA----------C--T---GC-TCT-AT-ATtacatgtatcaagctggttgtatatgggctcagacatgtttaatggaaaaaataagtttttc
gi|3 : T--GCCTCTCCCTTGTA--CTG----GAGAATGGA--C-AGACGGAATTCT-C-TGCCTCC--GCCTT-ACAGGATGGCT-CGATG--TGCTGTCTCAGCATTCCGTGGGAAGGG----AAGTCG-TGTGGCAA--------ACCTGGGATGATGTGT-ACGAGGCTGTCTGATGT-ATTCAGCAAACTTTCAAG-CG-AGACCGCACCAGCA-GTAGATGTGATGA---CC------TC-AAGAC-TTGGAGAA-----TCATGCT-CAT--GATGTACGACAGTTCCAG-ACAT-GCTGATGGT----GTT-GA-TTGA-TGC--CAGGA-GTACATG-TTTGCTCG--AAGAGCAGAGA-----------CC----------ATACGAGGCATCC-------CCTACTCG-----GCAGGCTC--T--ACT-ACAGCATGTGAAGCGTGCTGCC-ACCAGGCCGGCCTGCATA-GGAGTCAGTCGATGGATATTTTCAACCAGAA-ACAC-AA-TGCCACCGA-T----CT-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACGGA-CTC-C-A-CCTATT-CA-GAGAGC-TGTCAGCAACTCACC-AGTGTAGA-G--AA-GT-CAGAATGCCGTG-AACGA--GCA-AATGCTA----C--C--GTT---TT---GTCTGACCT----------TA----------C--A---GC-TGTGAG-ATGC---------AC-A-TGTAG--ACTGA-GAGTTC-TAAACTCACCTTTCTGCACA-CGA-TGTC-AAATATGAAACAGT-GAACTTG-CTGTT-TACTGG-T-ACAG-GTACATACACagttgtcaatgt
gi|4 : gaaaagaagatgctctattatgtgagcaaccatgccctattaacctgcgctgaggtggctccttgtagacatgaagaacgaacccggatcttcttgcattgccaagcagccacagaagaagagcagcaaaaatactcatggtaaagcagcgacaaaatgttctggtctcagcagtgagtttctgccaaccctccattgagattgttctgagcagctgttgattgtctTGGA--CTG----GAGAA--TA--CAAGA-GAAATTCT-C-TTCTTTCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAACATTCCGTGGG-AAGGGAAGAAGTCGGTGTGGCAAACTTGCACACCTGGGATG-TCTGTGACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGTCA-GTACC-CACCAGC-AGTA---G--ATGA---CC------TT-GAGAC--------AGT---CAATGAT-CATCGAATATACGACAGGTCCAGTACA--GCT-AT-GT----GTTAGA-T-GA-AG---CAGAATGGACA-G-TT-GCTCGGAAGG--CAGAGACCCATATGAGGCC----------AT--------TCC------TCCTACTCA----GACAG-CTCCAT--ACTGGCAGCtatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|22 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccagctcttctcgaagatctttatctcatgccagagccgagaatacgacctcactgccttctttcagcatgagaaccaggcattccctgctgccctgagtgatggtggaaagcttcactcctgtcagaaatcccagcttactaccatgcttgagacccatgttaccatccctgacgtagaaccagaggctgacaccatcatcattgatggttcgacaccagtgaatagtctgccaccaaggccctcgaagacctttgaggaatatggagtacttgatgtgcttccaaccatgcaaggttgtttgaccaagtacaacaggacggacctcgtgtttgatgtctatcagccatcgagtctgaaggctgaagctaggtcaaagcgaggacgtggagccagacgcagggtgaaagagaagggcaaagttccctcaatctggcggaacttcctccgaggcaatgacaaaaaaccgagttgttggctgacaatattgcacagatggctgcaccaaagatggtcattgtgaccaaagaagatgctgtgagcaaccataccatcaatttggctgaggtgactccttgtagccatgaagaagctgacactcggatctttctgcatgtcacgcagcagaagaaggcagcaaagtactcatggtcaaagccagcgacacagatgttctggtcatagcagtgagtgttctgccaaccctccatgagattggtctgcagtagctgC----TGGCTGCGATG--C--TGTCTCAGCATTCCGTGGG
gi|6 : GA---CC------TCGAAGACCTTTGAGGAAT---ATGCAGTACTT--GATGTTCTCCAA--CCA-TACAAGGTTGA---------TT-GACC-GAGTACAACAGGACGGACATC-GT-GTTTG--A
gi|9 : atgatgacctgggaacagaagcactcccagctggctcaggagttccagagagggaaatttgtagtacacaaaacaggttgatacttctcagcaaatggccatcgaccaagctcatgagcaggtcaatgctgtctcaaggctgatgggaagcaatcagtgtgactgaagatccatcagcactgaggaagaggatggtagctggtccgaagtcagccacttggttgaacagtatgaggcagcagctggaaccaaagagcacactgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaagctcccccaaaccatgacagatatgggcaatccattccaagaagcaagccgagactgttttcattggacacaaggacattgcccaccacactgcagctgaactttttggcacacaccacgagaaaggaagggtgcgattccagcagttcatgcatggactagaggtgagagaaccaccttctatgacccaatcaagaagaaccaggtaagctttttccgaaagaactgtcctctttatctcatccagagccgagaatgttacctcactgccttctttcagcatgacaaccaggcattccctgctgccctgagtgatggtggaaagcttcaccctgtcggaaatcccagcttactaccattcttgagacccatgtaccatccatgacgtagaaccagagactgacaccatcatcattgatggttcagcactagtgaatagtctgccactaagCACCGATC----T---GGCTGGACAC-CAG--AAAGG-CGATCTGT-GGCAGATTCTCTGGACTGAGCTT-CCA-CCTATTGCAAGAGAG--TGTCAGCAACTCAC--AGTGTGGATGTCAATGT-CAGA----CATGTGGCGAT-GCAGAATGCTA----A--C--CTT---TTTG-GTACGACCTTACTGGACTGTG----------C--A---GC-TGT-AAGATGC--------GACCA-AGTAAGAACTAAAGAGTTT-A-ACCTCACCTGTCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAAATTGCCTATTGTACTGG-T-ACAGTGTACATATACtgtccatcagccatcgagtcgagctgaagctaggtcaaagcaaggacatggagacgcagggtgacagagaagggcaaagttcactcaaactggcagaacttcctccgagacaatgacaacaaaacggagacagttgttcaatttcctggctgacaagattgtagatggctgcatcaaagatggtcatgtgaccaaaaa
gi|10 : CACCAA-C----TGCGGGCTG-AC-C-A-G--AAA---TGA-CTGT-GGCAGATCTTATGGACTGA-CTC-C-A--CTAT--CA-GAGAGTATGTCAG-AACTCACCAA----GGATG-CAATGTACAGAATGCCGCT-GACGAGAGCA-AATGCTA----C--CTTGTT---T---------ACCT---------GTA----------CTTACTCGCACGT-AG-ATGC--------GAC-ATTATAG--ACTAA-GAGTTCAT-ACCTCACCTATTT-CACACCGACTGTCAAAACATAAAAAAGTCGAACT--TCTGTCTTACTGACT-TCA-TGT-CATATACtatacttaataaatcttgtaattgttgtgttcaatgtgtattttgttcaaattttgctaaaaagtggtacaaagaagccctaaaacgaattcaaagctatacatttcacttccccgtggtcaaaaacatagattatgatttgacaccaaaatcatccaaatcggtccagagaatccagttctgtggcaaaatatgtgtttcctatgccagaaatggcgaccatcttgaaaaatagcggccattttgaaaattcaagtggctaatgggttttctctaataagttatccaagaaggacattcatgcaaattgtggtgcttgtatccggatttgaaagatttttacagctatatgcttcacta
gi|16 : aT-CAGAGTGCCGTG-GACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-AA-ATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-TAACAGTGTACATACACatactacaataaatctgaattgttgtgtcccattggtttttgttcattttttgctaaaacgtagtaccaaagaaggccctaaaccgaattcaaagccataaatttcacttcaccatggtcaaaaacatattgatttgacaccaaaaatcattcaaatcggttccaagatccacgttcttggcaaaataatgtgtttcctatgacagaaatgcgccacttgaaaaagcggccattttgaaaattcaagtggctaatgcggtttttttcaataagtttccaagtaaggacattatagcaaattttggttgcttgtttccggcgatttgaacgatttacaagtatctgcttcacta
8 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|11 ): ACATAATAAATCTTGTAATTGTGTATTTTTTTTCAATTTATGCTAAAAAGTGGTACAAAGAAGCCCTAACATGAATTCAAAGCTATAAATTTCACATCCCCAAGGTCAAAAACATATGATGACACCAAAATCATCCAAATCGGTTTAGAGAATCCAGTTCTGTGGCAAAATATGTGTTTCTTATGCCAGAAATGACGGCCATCTTGAAAAATAGTGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATTTTGGTGCTTGTTTCCGGATTTGAAGATTTTTACAGTTATCTGCTTCACTA
Unaligned ( gi|12 ): ACCTTGATATTTTTTAATTATATCGCTACAATTATCATACAAGGAAGCTTCTAAGTAATTCCAGAGTTCCAAATTCAGCTTCTATATGGTCAGAAATGTGTGATTTGACACCAAAATCAATACTGTAGGACAAATATTTACAATTTTATTGCAAAGAATGATTTTTCATAGCAGAAATGGCGGCCATATTGAAAAAAAGCCACCATCTTGAATTTGTCAGTGGCTTATGCTTTTTTTTCAAAAGTGTAGCTCCCAAGGAGTATTTGTGCTAATTTTGGTGCTTGTTTCCAGATTTGAAAGATTTCTGTGAAATATTCAGTTATCTGCTGCACTA
Unaligned ( gi|14 ): AGCTATAAATTTTACTTCCCCATGGTCAACAGCATATGGTTTGACACCAAAATCATCCAAATCGGTCCAGAGAATTCAGTTCTGTGGCAAAATATGTGTTTCCTATGCCAGAAATGGCGGCCATCTTGAAAAATAGCGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATGTTGGTGATTGTTTCCGGATTTGAAAGATCTTTACAATTATCTGCTTCACTA
Unaligned ( gi|17 ): CGTGCTGGCAACATGGATTTCAGTTGACTTAAACCTTGATTTTTTAATTATATCGCTACAATTATGGTACAAGGAAGCTTCTAAGTAATTTCAGAGTTCCAAATACAGCTTCTGCATGGTCAGAAATGTATGATTTGACACCA
Unaligned ( gi|18 ): CATCCACCTCCGAGACATGATGACTCTGGAACAGAAGCACCCCCAGCTGGCTCAGGAGTTCCAGAGAGGGAAATGTGTTGTACACAAATCAGGTCAATACTTCTCAGCAATGGATCACCGA
Unaligned ( gi|19 ): GCTAATGGGTTTTCTCTAATAAGTTGTCCATGAAGGACATTCATTCAAATTTCGGTGCTTGTTTCCGTATTTAAAAGATTTTTACAGCTATCTGCTTCACTA
Unaligned ( gi|20 ): TTGGTTTAGAAAAGCTTTGGATTCAGTTCGGTCAGAGTAAAAATGTTGAGTGGATACCTGTTCATGTTATGTTAGTAGCAGGGTGAGCCGAGAAGA
Unaligned ( gi|21 ): CATAAATCAGGTCGATACTTCTCAGCAATGGATCACCAA
Alignments
lowQualScore : 66666666 1 11 1 1 22222 1 1 1 1 1 1 1 1 1 222 1 4444 1 222222222 3333 1 22 2 5555555 33 2 1111 1111 11111 1111 11111 22222222 111 11 11 111 222222 11 111 111 1111 1 999999999999999999999999999999999 111111 11 1 1 1 1 11 111111 1 11 2 2222222222 111 111 33333333333333333333333333333 222222222 11
lowQualScore : 1 99999999 0 8 1 8 11 0 0 0 8 0 55555 0 2 0 2 2 0 66 2 0 3 0 0 2 3 0 1 0 0 2 2 8 1 8 3 2 1 555 55 0 2222 2 3 2 3 2 0 2 999999999 3 1111 0 77 0 3 7777777 0 00 3 6 3 8 8 3 6 99 3333 4 2 2 4 3 99 4444 99 99 5 8 66666 0 3 4444 11111 3 5 99999999 44 8 8 8 444 6 0 8 66 99 444 333333 44 3 444 1 8 444 11 8 5 5 7777 8 8 1 0 0 0 3 000000000000000000000000000000000 0 777777 8 11 8 2 3 2 0 3 0 0 2 0 77 666666 6 777 99 6 6 9 3 6 2 6 11 55 1 77 3 5 5 1 77 5 2222222222 000 222 0 11111111111111111111111111111 5 5 5 777777777 6 6 99 6 888 6 6 1 6 1 2 6 00 1
lowQualScore : . ........ . . . . .. . . . . . ..... . . . . . . .. . . . . . . . . . . . . . . . . . . . ... .. . .... . . . . . . . ......... . .... . .. . . ....... . .. . . . . . . . .. .... . . . . . .. .... .. .. . . ..... . . .... ..... . . ........ .. . . . ... . . . .. .. ... ...... .. . ... . . ... .. . . . .... . . . . . . . ................................. . ...... . .. . . . . . . . . . . .. ...... . ... .. . . . . . . . .. .. . .. . . . . .. . .......... ... ... . ............................. . . . ......... . . .. . ... . . . . . . . .. .
lowQualScore : 0 66666666 0 0 0 0 00 6 8 6 0 8 00000 0 5 0 0 5 0 88 5 0 2 0 0 0 2 0 0 0 0 0 0 0 4 0 2 5 0 555 00 0 5555 5 2 5 2 5 0 5 000000000 2 2222 0 55 0 2 3333333 7 33 3 7 7 0 0 2 7 22 5555 0 0 5 2 2 22 2222 22 22 2 0 22222 8 2 2222 88888 8 0 00000000 88 0 0 0 000 4 8 0 22 00 000 000000 22 8 000 4 2 222 66 0 0 0 0000 0 0 0 8 8 6 2 222222222222222222222222222222222 8 222222 0 00 0 0 2 0 0 2 0 0 0 0 00 222222 7 555 22 7 7 3 3 7 5 7 88 77 0 77 7 7 7 4 11 7 7777777777 000 111 4 77777777777777777777777777777 7 7 7 888888888 7 7 22 7 777 7 7 7 7 7 5 7 22 7
consensus : GCTTTTTCCGAAGGAACTGTCCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATG-TACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTC-TCC-AACCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGATG--ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-----------CC----------AT--GA-G--TCCTCCTACTC----GAGCAG-CTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGGC-TGCATATGGAGTCAGTCGATGG-TATGT-CAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
Reference ( family-4106 ) : GCTCTTTNCGAAGGA------CTCTTTATCTCATGCCAGAG-CCGAGAATGTNACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATG-TACCATCCCTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGGGGAATATGCAGTAC-TTGATGTNC-TCC-AGCCATGCA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCNATCAGCCATCGAGTCTG-AGGCTGAA-GCTAGGTCAAAGCGAGGACGTGG----AGACGCAGGGTGACAGAGAAGGGCAAAGTTCCCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-CT-CCTGGCTGAC-AAGATTG--CAGATGGCTGCACCAAAGATGGTCA-TGTGACCAAAAAAAGAAGATGCTCTATTATGTGAGCAACCATGCCCTATCAACCTGCGCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGTCAAAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGTGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGATG--ATGA---CC------TCGAGACCTTNGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-----------CC----------AT--------TCCTCCTACTC----GAGCAG-CTC--TACT-GCAGCATGCGAAGCGTGCTGCCTACCAGGCCGGC-TGCATATGGAGTCAGTCGATGG-TATGT-CAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAATGT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
gi|1 : GCTTTTTCCGAAAGAACTGTCCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATG-TACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTC-TCC-AACCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC-G-AG-CTGAA-GCTAGGTCAAAGCAAGGACATGG----AGACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--ACAGTTGTTCAA-TTTCCTGGCTGAC-AAGATTG--TAGATGGCTGCATCAAAGATGGTCA-TGTGACCAAAAAAAGAAGATGCT-------GTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCACGGAGAAGCTGACATCCGGATCTTTCTGCA-TGCCAAACATGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-AGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTAGGCCAAGGACAGAACACGAGATGGATTACAGTACATGACCTGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TAGCTGCAATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTAGCAAAC--------CTGGGATGTGTGTG-AGGAGGCT-TCTGATGT-CTTCAGCAAACTC---AG-CAGTACC-CACCAGCAAGTAGATG--ATGA---CC------TCAAGACCTTGGAGAAGT---TTGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATG-TTGCTCG--AAGCAGAGA-----------CC----------AT--------TCCTCCTACTC----GAGCAG-TTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGGC-TGCATGTGGAGTCAGTCGATGG-TATGT-CAACCAGAA-ACACAAA-TCCCACCGA-C----TA-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-GCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-T-ACAGTGTACATACAC
gi|10 : CACCAA-C----TGCGGGCTG-AC-C-A-G--AAA---TGA-CTGT-GGCAGATCTTATGGACTGA-CT-CCA--CTAT--CA-GAGAGTATGTCAG-AACTCACCAA----GGATG-CAATGTACAGA-ATGCCGCTGACGAGAGCA-AATGCTA----C--CTTGTT---T---------ACCT---------GTA----------CTTACTCGCACGT-A-GATGC--------GAC-ATTATAG--ACTAA-GAGTTCAT-ACCTCACCTATTT-CACACCGACTGTCAAAACATAAAAAAGTCGAACT--TCTGTCTTACTGACT-TCA-TGT-CATATAC
gi|13 : aTTCAGCA-TACCAAGCATGCAGCAatactacaataaatctgaattgttgtgtcccattggtttttgttcattttttgctaaaacgtagtaccaaagaaggccctaaaccgaattcaaagccataaatttcacttcaccatggtcaaaaacatattgatttgacaccaaaaatcattcaaatcggttccaagatccacgttcttggcaaaataatgtgtttcctatgacagaaatgcgccacttgaaaaagcggccattttgaaaattcaagtggctaatgcggtttttttcaataagtttccaagtaaggacattatagcaaattttggttgcttgtttccggcgatttgaacgatttacaagtatctgcttcacta
gi|15 : ttctgatgttatgaatgtgtttcaaaaatcaagtatacagtgtatatcctcctgtactggatgaccattatattgatatcgtccagatatatgttgtcattgttgtgtctctgtatgattggtcttcaaatgttgaagccatattcaatatgcttggaaggaagcaacgttcatttgatgttatcccacctacaaaagcatcattgaCTGAGTTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCGTGCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTATTCATGGTCAAAGTCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGCTTTGTCTGC-AGCAGCTGTGGATTGCCTT------AGGACAACACACGAGATGGATTCCAGTACATGCCCTGTGCCTCTCCCTTGCA--ATG----GAGAA--GA--CCtacatgtatcaagctggttgtatatgggctcagacatgtttaatggaaaaaataagtttttc
gi|16 : T-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-TAACAGTGTACATACAC
gi|2 : CCATGTAGAAGCTGACACCCGGATTTTTCTGCA-TGCCAAGCACACAGCAGAAAAAG-GCAGC-AAAGTACTCATGTTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCATCCA-TGATATTGGTCTGC-AGCAGCTGTGGATCGCCTTTGACCAAGGTCAGAACACGAGATGGATTCTAGTACATGACCCGTGTCTCTCCCTTGCA--CTG----AAGAA--GA--CCAGA-GGAATTCT-CTT-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGCGTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGC-AGTAGATG--ATGATGCCC------TCAAGACTTTGGAAAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-----------CCATACGAGGCTAT--------TCCTCCTACTC----GAGCAG-CTC--TACT-GCAGCATGTGAAGCATGCTGCCTACCAGGCTGGC-TGCATATGGAGTCAGTCGATGG-TATGT-CAACCAGAA-ACACAAAGTCCCACCGA-CTGCATG-GGGCTGGAC-CAAAA--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAACTGCCA-CCTATTGCA-GAGAGC-TGTCAACAACTCAACAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGAACGAT-GCA-AATGCTATGGTAACC--GTT---TT-G-GTCTGACCT---------GTACTGGACTGTGC--A---GC-TGT-A-GATGCGGAATGTAGAC-A-TGTAG--ACTAA-GAATTC-T-ACCTCACCTATCTGCACA-CGA-TGTCGAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T---AGTGTGCATACAC
gi|22 : gaccaatagagtggatgttgaggcacaaccagggcacactggtgacaccaC----TGGCTGCGATG--C--TGTCTCAGCATTCCGTGGGtatacgtaataaatcttgtaactgttgtgttcaatgtgtattttgttcattttttgctaaaaggtggtacaaagaagccctaaaacgaattcaaagctataaatttcactttcccatggtcaaaaacatgaattgacaccaaatcatgccaaatcggtccagttcttggtttcctatgccagataatggggcatcttgaaaaatagcggccatattgaaattcaagtggctatatgggtttcttatagcaagttgtccaaggacattatgcaaatttgtgtgcttgtttcctgatgtgataagattttttgcagctatctgcatgcttcactac
gi|3 : AAAAGAAGATGCTCTATTATGTGAGCAACCATGCCCTATTAACCTGCGCTGAGGTGGCTCCTTGTAGACATGAAGAA--CGA-ACCCGGATCTTCTTGCATTGCCAAGCA-GCCACAGAAGAAGAGCAGCAAAAATACTCATGGT-AAAG-CAGCGACA-AAATGTTCTGGTCTCAGCAGTGAGT-TTCTGCCAACCCTCCATTGAGATTGTTCTG--AGCAGCTGTTGATTGTCTT
gi|3 : gTGCCTCTCCCTTGTA--CTG----GAGAATGGA--C-AGACGGAATTCT-C-TGCCTCC--GCCTT-ACAGGATGGCT-CGATG--TGCTGTCTCAGCATTCCGTGGGAAGGG----AAGTCG-TGTGGCAAAC--------CTGGGATG-ATGTGTACGAGGCTGTCTGATGT-ATTCAGCAAACTTTCAAGCGAG-ACCGCACCAGCA-GTAGATGTGATGA---CC------TCAAGAC-TTGGAGAA-----TCATGCTCAT--GATGTACGACAGTTCCAG-ACATGCTGATGGT----GTT-GATTGATGCCAGGA-GTACATGTTTGCTCGAAGAGCAGAGA-----------CC----------ATACGAGGCATCC-CCTACTC----G-GCAGGCTC--TACT-ACAGCATGTGAAGCGTGCTGCC-ACCAGGCCGGCCTGCATA-GGAGTCAGTCGATGGATATTTTCAACCAGAA-ACACAA--TGCCACCGA-T----CT-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACGGA-CT-CCA-CCTATT-CA-GAGAGC-TGTCAGCAACTCACC-AGTGTAGA-G--AA-GT-CAGA-ATGCCGTGAACGA--GCA-AATGCTA----C--C--GTT---TT---GTCTGACCT----------TA----------C--A---GC-TGTGA-GATGC---------AC-A-TGTAG--ACTGA-GAGTTC-TAAACTCACCTTTCTGCACA-CGA-TGTC-AAATATGAAACAGT-GAACTTG-CTGTT-TACTGG-T-ACAG-GTACATACACgcctctcccttgtactggagaatggacagacggaattctctgcctccgccttacaggatggctcgatgtgctgtctcagcattccgtgggaagggaagtcgtgtggcaaacctgggatgatgtgtacgaggctgtctgatgtattcagcaaactttcaagcgagaccgcaccagcagtagatgtgatgacctcaagacttggagaatcatgctcatgatgtacgacagttccagacatgctgatggtgttgattgatgccaggagtacatgtttgctcgaagagcagagaccatacgaggcatcccctactcggcaggctctactacagcatgtgaagcgtgctgccaccaggccggcctgcataggagtcagtcgatggatattttcaaccagaaacacaatgccaccgatctgggctggaccaagaaaggcgatctgtggcagatcttctggacggactccacctattcagagagctgtcagcaactcaccagtgtagagaagtcagaatgccgtgaacgagcaaatgctaccgttttgtctgaccttacagctgtgagatgcacatgtagactgagagttctaaactcacctttctgcacacgatgtcaaatatgaaacagtgaacttgctgtttactggtacaggtacatacactatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : gaaaagaagatgctctattatgtgagcaaccatgccctattaacctgcgctgaggtggctccttgtagacatgaagaacgaacccggatcttcttgcattgccaagcagccacagaagaagagcagcaaaaatactcatggtaaagcagcgacaaaatgttctggtctcagcagtgagtttctgccaaccctccattgagattgttctgagcagctgttgattgtctGCTCTTCTCGAAGA--------TCTTTATCTCATGCCAGAG-CCGAGAATACGACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCAGAAA-TCCCAGCTTACTACCATGCTT-----GAGACCCATGTTACCATCCCTGACG-TAGAACCAGAGGCTGACACCATCATCATTG-ATGGTTCGACACCAGTGAAT-AGTCTGCCACCAAGG-CCCTCGAAGAC-CTTTGAGGAATATGGAGTAC-TTGATGTGCTTCC-AACCATGCA-AGGTTGTTTGACCAAGTACAACA-GGACGGACCTCGTGTTTGATGTCTATCAGCCATCGAGTCTGAAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGAAAGAGAAGGGCAAAGTTCCCTCAATCTGGCGGAACTTCCTCCGA-GGCAATGACAA-AAAAC--CG--A--GTTGT----------TGGCTGAC-AATATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACC----AAAGAAGATGC-------TGTGAGCAACCATACC--ATCAATTTG-GCTGAGGTGACTCCTTGTAGCCATGAAGAAGCTGACACTCGGATCTTTCTGCA-TGT----CACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGTAGCTGTGGACTGtatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccaTGGA--CTG----GAGAA--TA--CAAGA-GAAATTCT-C-TTCTTTCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAACATTCCGTGGGAA-GGGAAGAAGTCGGTGTGGCAAACTTGCACACCTGGGATGTCTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGTCAGTACC-CACCAGC-AGTA---G--ATGA---CC------TTGAGAC--------AGT---CAATGATCATCGAATATACGACAGGTCCAGTACA-GCT-AT-GT----GTTAGAT-GAAG-CAGAATGGACA-G-TTGCTCGGAAGGCAGAGACCCATATGAGGCC----------AT--------TCCTCCTACTC----AGACAG-CTCCATACTGGCAGCgagaatacaagagaaattctcttctttcatgccttcactggctgcgatgttgtctcaacattccgtgggaagggaagaagtcggtgtggcaaacttgcacacctgggatgtctgtgacgaggcttctgatgtcttcagcaaactcagtcagtacccaccagcagtagatgaccttgagacagtcaatgatcatcgaatatacgacaggtccagtacagctatgtgttagatgaagcagaatggacagttgctcggaaggcagagacccatatgaggccattcctcctactcagacagctccatactggcagc
gi|5 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccagctcttctcgaagatctttatctcatgccagagccgagaatacgacctcactgccttctttcagcatgagaaccaggcattccctgctgccctgagtgatggtggaaagcttcactcctgtcagaaatcccagcttactaccatgcttgagacccatgttaccatccctgacgtagaaccagaggctgacaccatcatcattgatggttcgacaccagtgaatagtctgccaccaaggccctcgaagacctttgaggaatatggagtacttgatgtgcttccaaccatgcaaggttgtttgaccaagtacaacaggacggacctcgtgtttgatgtctatcagccatcgagtctgaaggctgaagctaggtcaaagcgaggacgtggagccagacgcagggtgaaagagaagggcaaagttccctcaatctggcggaacttcctccgaggcaatgacaaaaaaccgagttgttggctgacaatattgcacagatggctgcaccaaagatggtcattgtgaccaaagaagatgctgtgagcaaccataccatcaatttggctgaggtgactccttgtagccatgaagaagctgacactcggatctttctgcatgtcacgcagcagaagaaggcagcaaagtactcatggtcaaagccagcgacacagatgttctggtcatagcagtgagtgttctgccaaccctccatgagattggtctgcagtagctgGCTTCTTC--AAG--------CTCTTTATCTCATGCAGAAGACCTAGACTGTTGAATCCCTGCCATTCTTTCAGCAGATGAGAACCAGGCATTCCGGGCTGCCCTTAGTGA-GTTGGAAAGCT-CACTCCTGCCAGAAAATCCCAGCTTAC-ACTTTCCTTTATTAGAGACCATTT-TACCATCCCTGACGATAGAACTGAAGG-TGACACCATCATCATGGGATGGTC--ACACTA-TGAATGAGTC-GCCACCAAGGTACCTCGAAGAAACTTTAGCGAATATGCAG-ACATTGATGTTT-TCCGAGCCATACAGAGGTTATTTGACCAAGTACAAAAAGGACGGAAA-CGTGTTTGAT--CGATCAGCCATCGAGTCTGGAGGCTGAAAGCTAGGTCAAAGCGAGGACGTGGAGTCAGACGCA--GTTACAG-GAAGTGCAAAATTCCCTCAAAC-G--GGAACTTCCTCCGAGGACAATGACAACAAACC---G--A--GTTGTTCAA-CTGCCTGGCTGCCAAAGATTGCACAGATGGCTGCACTAAAGATGGTCATTGTGACCAAAGA
gi|6 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataactttttccgacaggaactgtgcctcagttggtgcaatcaagggaaaaggtgctgaaggaggactgccaGCTTTTTCCGAAAGAACTGTCCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATG-TACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTC-TCC-AACCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC-G-A-GCTGAA-GCTAGGTCAAAGCAAGGACATGG----AGACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAGACA--GTTGTTCAATTT-CCTGGCTGAC-AAGATTG--TAGATGGCTGCATCAAAGATGGTCA-TGTGACCAAAAA
gi|7 : atgatgacctgggaacagaagcactcccagctggctcaggagttccagagagggaaatttgtagtacacaaaacaggttgatacttctcagcaaatggccatcgaccaagctcatgagcaggtcaatgctgtctcaaggctgatgggaagcaatcagtgtgactgaagatccatcagcactgaggaagaggatggtagctggtccgaagtcagccacttggttgaacagtatgaggcagcagctggaaccaaagagcacactgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaagctcccccaaaccatgacagatatgggcaatccattccaagaagcaagccgagactgttttcattggacacaaggacattgcccaccacactgcagctgaactttttggcacacaccacgagaaaggaagggtgcgattccagcagttcatgcatggactagaggtgagagaaccaccttctatgacccaatcaagaagaaccaggtaaGCTCTTTGCGAAG--------CTCTATATCTCATGCCAGAA-CCGAGAATGTGACCTCACTG----------------TGAGAACCAAACATTCCCTGCTACCCTGAGTGA-------AAGCTTCAATCCTGTCGGAAA-TCCCAGCTTACTACCATTC
gi|7 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccaCA-AGGTTGTTTGACCAAGTACAACA-GGACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|8 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntATACAGATGTTTTCGTGATTGCTGTAAACGTTTT---------CCA-T-----TGG-CTGAGAGAAGCTTTGGCTTGAGTTCAGTCAGGGTAAAAATGTTAGATCGATTCCTGTTCATGA----TG----TTAGTAGCAGGTTGAGCCGAGAA--GAGTCTGCT-GGTATTTTAT-T-TTTTCATGCCTTTTC----TGGTTGTGATAACT--TGTC--AGGTTTCAAAGGCAAAGGGGAAAAGTCTTTATGGCAAA---------------TATTTGTC-CTGATGCT-ACTAATGTGTTTCAAAAAATTG---AGTATATATT-CCCCGGTAC-TGGATGG-ATTA---CCATGCTATTGATATCATCCAGATGTATGTTGTG-TCTT----TGTATGATAGGCCTAGT-----CTTGTCGCAAAAGTT-GAT-GAGGCCAGATTCGACATGTTTGCAAGGAAA-CAACGT-----------TC----------ATTTGATG--TTATCCCACCCACAAAAGCAT-CCT--TGAT-TCAGCATACTTAGCGTGCAGCATATCAAGCTGGT-TGTATATGGGCTCAGACATTGG-CATGT-TTAATGGAAGAAATAAG-TCCCTCTGA-T----TA-GGGTTGG-----AAGCTAAAGGTTAATGTATAGACAG-TTGTATGGTCTGAGCT-TCATCCGATTGCT-GAGTCA-TGCAAGCAGCTTCCAAAATGTGGATG-TAA-GC-AAGA-ATGTCGGTGCCGAT-GTA-AGTGCT------------TTGAGTT-GAGTTTGCCGT---------GTA----------C--T---GC-TCT-A-TAT
gi|9 : CACCGATC----TG-G--CTGGACAC-CAG--AAAGG-CGATCTGT-GGCAGATTCTCTGGACTGAGCTTCCA-CCTATTGCAAGAGAG--TGTCAGCAACTCAC--AGTGTGGATGTCAATGT-CAGACATG---TGG-CGAT-GCAGAATGCTA----A--C--CTT---TTTG-GTACGACCTTACTGGACTGTG----------C--A---GC-TGT-AAGATGC--------GACCA-AGTAAGAACTAAAGAGTTT-A-ACCTCACCTGTCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAAATTGCCTATTGTACTGG-T-ACAGTGTACATATACagttgtcaatgt
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): ACATAATAAATCTTGTAATTGTGTATTTTTTTTCAATTTATGCTAAAAAGTGGTACAAAGAAGCCCTAACATGAATTCAAAGCTATAAATTTCACATCCCCAAGGTCAAAAACATATGATGACACCAAAATCATCCAAATCGGTTTAGAGAATCCAGTTCTGTGGCAAAATATGTGTTTCTTATGCCAGAAATGACGGCCATCTTGAAAAATAGTGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATTTTGGTGCTTGTTTCCGGATTTGAAGATTTTTACAGTTATCTGCTTCACTA
Unaligned ( gi|12 ): ACCTTGATATTTTTTAATTATATCGCTACAATTATCATACAAGGAAGCTTCTAAGTAATTCCAGAGTTCCAAATTCAGCTTCTATATGGTCAGAAATGTGTGATTTGACACCAAAATCAATACTGTAGGACAAATATTTACAATTTTATTGCAAAGAATGATTTTTCATAGCAGAAATGGCGGCCATATTGAAAAAAAGCCACCATCTTGAATTTGTCAGTGGCTTATGCTTTTTTTTCAAAAGTGTAGCTCCCAAGGAGTATTTGTGCTAATTTTGGTGCTTGTTTCCAGATTTGAAAGATTTCTGTGAAATATTCAGTTATCTGCTGCACTA
Unaligned ( gi|14 ): AGCTATAAATTTTACTTCCCCATGGTCAACAGCATATGGTTTGACACCAAAATCATCCAAATCGGTCCAGAGAATTCAGTTCTGTGGCAAAATATGTGTTTCCTATGCCAGAAATGGCGGCCATCTTGAAAAATAGCGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATGTTGGTGATTGTTTCCGGATTTGAAAGATCTTTACAATTATCTGCTTCACTA
Unaligned ( gi|17 ): CGTGCTGGCAACATGGATTTCAGTTGACTTAAACCTTGATTTTTTAATTATATCGCTACAATTATGGTACAAGGAAGCTTCTAAGTAATTTCAGAGTTCCAAATACAGCTTCTGCATGGTCAGAAATGTATGATTTGACACCA
Unaligned ( gi|18 ): CATCCACCTCCGAGACATGATGACTCTGGAACAGAAGCACCCCCAGCTGGCTCAGGAGTTCCAGAGAGGGAAATGTGTTGTACACAAATCAGGTCAATACTTCTCAGCAATGGATCACCGA
Unaligned ( gi|19 ): GCTAATGGGTTTTCTCTAATAAGTTGTCCATGAAGGACATTCATTCAAATTTCGGTGCTTGTTTCCGTATTTAAAAGATTTTTACAGCTATCTGCTTCACTA
Unaligned ( gi|20 ): TTGGTTTAGAAAAGCTTTGGATTCAGTTCGGTCAGAGTAAAAATGTTGAGTGGATACCTGTTCATGTTATGTTAGTAGCAGGGTGAGCCGAGAAGA
Unaligned ( gi|21 ): CATAAATCAGGTCGATACTTCTCAGCAATGGATCACCAA
Alignments
lowQualScore : 1 1 11 1 1 22222 1 1 1 1 1 1 1 1 1 11 1 11 1 222222222 2222 1 111 55555555 11 1 1111 1111 11111 1111 11111 22222222 111 11 11 111 222222 11 111 111 1111 1 111 77777777777 11 22222 11 1 1 1 1 111111 1 11 1 2222222222 111 111 33333333333333333333333333333 222222222 11
lowQualScore : 3 77777777 0 8 0 8 11 0 0 0 8 0 55555 0 1 0 2 2 0 66 2 0 3 0 0 3 0 0 0 8 1 8 3 2 0 88 55 0 3 55 2 3 1 3 2 0 2 999999999 3 7777 0 000 66 3 33333333 88 3 6 3 8 8 3 6 99 3333 1 2 2 4 3 99 4444 99 99 5 8 66666 0 3 4444 11111 3 5 99999999 44 8 8 8 444 6 0 8 66 99 444 333333 44 444 1 8 444 11 8 5 5 7777 8 8 1 0 0 0 3 444 11111111111 11 00000 8 11 6 3 1 1 0 8 0 0 0 2 0 3 0 666666 6 777 99 6 6 9 3 6 2 6 11 55 1 77 3 5 5 1 77 5 2222222222 000 222 0 11111111111111111111111111111 5 5 5 777777777 6 6 99 6 888 6 6 1 6 1 2 6 00 1
lowQualScore : . ........ . . . . .. . . . . . ..... . . . . . . .. . . . . . . . . . . . . . . . .. .. . . .. . . . . . . . ......... . .... . ... .. . ........ .. . . . . . . . .. .... . . . . . .. .... .. .. . . ..... . . .... ..... . . ........ .. . . . ... . . . .. .. ... ...... .. ... . . ... .. . . . .... . . . . . . . ... ........... .. ..... . .. . . . . . . . . . . . . . ...... . ... .. . . . . . . . .. .. . .. . . . . .. . .......... ... ... . ............................. . . . ......... . . .. . ... . . . . . . . .. .
lowQualScore : 3 00000000 0 0 6 0 00 6 8 6 0 8 00000 0 0 0 0 5 0 88 5 0 2 0 0 2 0 0 0 0 4 0 2 5 2 00 00 0 2 22 5 2 0 2 5 0 5 000000000 2 8888 0 000 55 2 00000000 33 3 7 7 0 0 2 7 22 5555 0 0 5 2 2 22 2222 22 22 2 0 22222 8 2 2222 88888 8 0 00000000 88 0 0 0 000 4 8 0 22 00 000 000000 22 000 4 2 222 66 0 0 0 0000 0 0 0 8 8 6 2 000 88888888888 00 88888 0 00 7 2 0 0 8 0 8 0 0 0 0 2 0 222222 7 555 22 7 7 3 3 7 5 7 88 77 0 77 3 7 7 4 11 7 7777777777 000 111 4 77777777777777777777777777777 7 7 7 888888888 7 7 22 7 777 7 7 7 7 7 5 7 22 7
consensus : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGATG--ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGACC---ATACGA-GGC-ATTC--CTCCTACTCG----AGCAG-CTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
Reference ( family-4106 ) : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGATG--ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGACC---AT--GA-G-----TC--CTCCTACTCG----AGCAG-CTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
gi|1 : GCTTTTTCCGA-AAGAACTGT-CCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GAG-CTGAA-GCTAGGTCAAAGCAAGGACATGGAG----ACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--ACAGTTGTTCAA-TTTCCTGGCTGAC-AAGATTGTA--GATGGCTGCATCAAAGATGGTCAT-GTGACCAAAAAAAGAAGATGCT-------GTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCACGGAGAAGCTGACATCCGGATCTTTCTGCA-TGCCAAACATGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-AGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTAGGCCAAGGACAGAACACGAGATGGATTACAGTACATGACCTGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TAGCTGCAATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTAGCAAAC--------CTGGGATGTGTGTG-AGGAGGCT-TCTGATGT-CTTCAGCAAACTC---AG-CAGTACC-CACCAGCAAGTAGATG--ATGA---CC------TCAAGACCTTGGAGAAGT---TTGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATG-TTGCTCG--AAGCAGAGACC---AT-----------TC--CTCCTACTCG----AGCAG-TTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATGTGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAA-TCCCACCGA-C----TA-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-GCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-T-ACAGTGTACATACAC
gi|10 : CACCAA-C----TGCGGGCTG-AC-C-A-G--AAA---TGA-CTGT-GGCAGATCTTATGGACTGA-CT-CCA--CTAT--CA-GAGAGTATGTCAG-AACTCACCAA----GGATG-CAATGTACAGA-ATGCCGCTGACGAGAGCA-AATGCTA----C--CTTGTT---T---------ACCT---------GTA----------CTTACTCGCACGT-A-GATGC--------GAC-ATTATAG--ACTAA-GAGTTCAT-ACCTCACCTATTT-CACACCGACTGTCAAAACATAAAAAAGTCGAACT--TCTGTCTTACTGACT-TCA-TGT-CATATAC
gi|13 : aTTCAGCA-TACCAAGCATGCAGCAatactacaataaatctgaattgttgtgtcccattggtttttgttcattttttgctaaaacgtagtaccaaagaaggccctaaaccgaattcaaagccataaatttcacttcaccatggtcaaaaacatattgatttgacaccaaaaatcattcaaatcggttccaagatccacgttcttggcaaaataatgtgtttcctatgacagaaatgcgccacttgaaaaagcggccattttgaaaattcaagtggctaatgcggtttttttcaataagtttccaagtaaggacattatagcaaattttggttgcttgtttccggcgatttgaacgatttacaagtatctgcttcacta
gi|13 : ttctgatgttatgaatgtgtttcaaaaatcaagtatacagtgtatatcctcctgtactggatgaccattatattgatatcgtccagatatatgttgtcattgttgtgtctctgtatgattggtcttcaaatgttgaagccatattcaatatgcttggaaggaagcaacgttcatttgatgttatcccacctacaaaagcatcattgaT-GCAGCAT-----ACATG-----TATCAAGCTGG-TTGTATATGGGCTCAGtacatgtatcaagctggttgtatatgggctcagacatgtttaatggaaaaaataagtttttc
gi|15 : ttctgatgttatgaatgtgtttcaaaaatcaagtatacagtgtatatcctcctgtactggatgaccattatattgatatcgtccagatatatgttgtcattgttgtgtctctgtatgattggtcttcaaatgttgaagccatattcaatatgcttggaaggaagcaacgttcatttgatgttatcccacctacaaaagcatcattgattcagcataccaagcaCTGAGTTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCGTGCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTATTCATGGTCAAAGTCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGCTTTGTCTGC-AGCAGCTGTGGATTGCCTT------AGGACAACACACGAGATGGATTCCAGTACATGCCCTGTGCCTCTCCCTTGCA--ATG----GAGAA--GA--CCacatgtttaatggaaaaaataagtttttc
gi|16 : T-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-TAACAGTGTACATACAC
gi|2 : CCATGTAGAAGCTGACACCCGGATTTTTCTGCA-TGCCAAGCACACAGCAGAAAAAG-GCAGC-AAAGTACTCATGTTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCATCCA-TGATATTGGTCTGC-AGCAGCTGTGGATCGCCTTTGACCAAGGTCAGAACACGAGATGGATTCTAGTACATGACCCGTGTCTCTCCCTTGCA--CTG----AAGAA--GA--CCAGA-GGAATTCT-CTT-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGCGTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGC-AGTAGATG--ATGATGCCC------TCAAGACTTTGGAAAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGACC---ATACGA-GGCTATTC--CTCCTACTCG----AGCAG-CTC--TACT-GCAGCATGTGAAGCATGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAAGTCCCACCGA-CTGCATG-GGGCTGGAC-CAAAA--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAACTGCCA-CCTATTGCA-GAGAGC-TGTCAACAACTCAACAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGAACGAT-GCA-AATGCTATGGTAACC--GTT---TT-G-GTCTGACCT---------GTACTGGACTGTGC--A---GC-TGT-A-GATGCGGAATGTAGAC-A-TGTAG--ACTAA-GAATTC-T-ACCTCACCTATCTGCACA-CGA-TGTCGAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T---AGTGTGCATACAC
gi|22 : gaccaatagagtggatgttgaggcacaaccagggcacactggtgacaccaC----TGGCTGCGATG--C--TGTCTCAGCATTCCGTGGGtatacgtaataaatcttgtaactgttgtgttcaatgtgtattttgttcattttttgctaaaaggtggtacaaagaagccctaaaacgaattcaaagctataaatttcactttcccatggtcaaaaacatgaattgacaccaaatcatgccaaatcggtccagttcttggtttcctatgccagataatggggcatcttgaaaaatagcggccatattgaaattcaagtggctatatgggtttcttatagcaagttgtccaaggacattatgcaaatttgtgtgcttgtttcctgatgtgataagattttttgcagctatctgcatgcttcactac
gi|3 : AAAAGAAGATGCTCTATTATGTGAGCAACCATGCCCTATTAACCTGCGCTGAGGTGGCTCCTTGTAGACATGAAGAA--CGA-ACCCGGATCTTCTTGCATTGCCAAGCA-GCCACAGAAGAAGAGCAGCAAAAATACTCATGGT-AAAG-CAGCGACA-AAATGTTCTGGTCTCAGCAGTGAGT-TTCTGCCAACCCTCCATTGAGATTGTTCTG--AGCAGCTGTTGATTGTCTT
gi|3 : gTGCCTCTCCCTTGTA--CTG----GAGAATGGA--C-AGACGGAATTCT-C-TGCCTCC--GCCTT-ACAGGATGGCT-CGATG--TGCTGTCTCAGCATTCCGTGGGAAGGG----AAGTCG-TGTGGCAAAC--------CTGGGATG-ATGTGTACGAGGCTGTCTGATGT-ATTCAGCAAACTTTCAAGCGAG-ACCGCACCAGCA-GTAGATGTGATGA---CC------TCAAGAC-TTGGAGAA-----TCATGCTCAT--GATGTACGACAGTTCCAG-ACATGCTGATGGT----GTT-GATTGATGCCAGGA-GTACATGTTTGCTCGAAGAGCAGAGACC---ATACGA-G-----GCATCCCCTACTCG-----GCAGGCTC--TACT-ACAGCATGTGAAGCGTGCTGCC-ACCAGGCCGGCCTGCATA-GGAGTCAGTCGATGGATATTTTCAACCAGAA-ACAC-AA-TGCCACCGA-T----CT-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACGGA-CT-CCA-CCTATT-CA-GAGAGC-TGTCAGCAACTCACC-AGTGTAGA-G--AA-GT-CAGA-ATGCCGTGAACGA--GCA-AATGCTA----C--C--GTT---TT---GTCTGACCT----------TA----------C--A---GC-TGTGA-GATGC---------AC-A-TGTAG--ACTGA-GAGTTC-TAAACTCACCTTTCTGCACA-CGA-TGTC-AAATATGAAACAGT-GAACTTG-CTGTT-TACTGG-T-ACAG-GTACATACACgcctctcccttgtactggagaatggacagacggaattctctgcctccgccttacaggatggctcgatgtgctgtctcagcattccgtgggaagggaagtcgtgtggcaaacctgggatgatgtgtacgaggctgtctgatgtattcagcaaactttcaagcgagaccgcaccagcagtagatgtgatgacctcaagacttggagaatcatgctcatgatgtacgacagttccagacatgctgatggtgttgattgatgccaggagtacatgtttgctcgaagagcagagaccatacgaggcatcccctactcggcaggctctactacagcatgtgaagcgtgctgccaccaggccggcctgcataggagtcagtcgatggatattttcaaccagaaacacaatgccaccgatctgggctggaccaagaaaggcgatctgtggcagatcttctggacggactccacctattcagagagctgtcagcaactcaccagtgtagagaagtcagaatgccgtgaacgagcaaatgctaccgttttgtctgaccttacagctgtgagatgcacatgtagactgagagttctaaactcacctttctgcacacgatgtcaaatatgaaacagtgaacttgctgtttactggtacaggtacatacactatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : gaaaagaagatgctctattatgtgagcaaccatgccctattaacctgcgctgaggtggctccttgtagacatgaagaacgaacccggatcttcttgcattgccaagcagccacagaagaagagcagcaaaaatactcatggtaaagcagcgacaaaatgttctggtctcagcagtgagtttctgccaaccctccattgagattgttctgagcagctgttgattgtctGCTCTTCTCGA-AGA---------TCTTTATCTCATGCCAGAG-CCGAGAATACGACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCAGAAA-TCCCAGCTTACTACCATGCTT-----GAGACCCATGTTACCATCCCTGACG-TAGAACCAGAGGCTGACACCATCATCATTG-ATGGTTCGACACCAGTGAAT-AGTCTGCCACCAAGG-CCCTCGAAGAC-CTTTGAGGAATATGGAGTAC-TTGATGTGCTTCCAA-CCATGCA-AGGTTGTTTGACCAAGTACAACA-GGACGGACCTCGTGTTTGATGTCTATCAGCCATCGAGTCTGAAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGAAAGAGAAGGGCAAAGTTCCCTCAATCTGGCGGAACTTCCTCCGA-GGCAATGACAA-AAAAC--CG--A--GTTGT----------TGGCTGAC-AATATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACC----AAAGAAGATGC-------TGTGAGCAACCATACC--ATCAATTTG-GCTGAGGTGACTCCTTGTAGCCATGAAGAAGCTGACACTCGGATCTTTCTGCA-TGT----CACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGTAGCTGTGGACTGtatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccaTGGA--CTG----GAGAA--TA--CAAGA-GAAATTCT-C-TTCTTTCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAACATTCCGTGGGAA-GGGAAGAAGTCGGTGTGGCAAACTTGCACACCTGGGATGTCTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGTCAGTACC-CACCAGC-AGTA---G--ATGA---CC------TTGAGAC--------AGT---CAATGATCATCGAATATACGACAGGTCCAGTACA-GCT-AT-GT----GTTAGAT-GAAG-CAGAATGGACA-G-TTGCTCGGAAGGCAGAGACCCATAT--GA-GGCCATTC--CTCCTACTCA----GACAG-CTCCATACTGGCAGCgagaatacaagagaaattctcttctttcatgccttcactggctgcgatgttgtctcaacattccgtgggaagggaagaagtcggtgtggcaaacttgcacacctgggatgtctgtgacgaggcttctgatgtcttcagcaaactcagtcagtacccaccagcagtagatgaccttgagacagtcaatgatcatcgaatatacgacaggtccagtacagctatgtgttagatgaagcagaatggacagttgctcggaaggcagagacccatatgaggccattcctcctactcagacagctccatactggcagc
gi|5 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccagctcttctcgaagatctttatctcatgccagagccgagaatacgacctcactgccttctttcagcatgagaaccaggcattccctgctgccctgagtgatggtggaaagcttcactcctgtcagaaatcccagcttactaccatgcttgagacccatgttaccatccctgacgtagaaccagaggctgacaccatcatcattgatggttcgacaccagtgaatagtctgccaccaaggccctcgaagacctttgaggaatatggagtacttgatgtgcttccaaccatgcaaggttgtttgaccaagtacaacaggacggacctcgtgtttgatgtctatcagccatcgagtctgaaggctgaagctaggtcaaagcgaggacgtggagccagacgcagggtgaaagagaagggcaaagttccctcaatctggcggaacttcctccgaggcaatgacaaaaaaccgagttgttggctgacaatattgcacagatggctgcaccaaagatggtcattgtgaccaaagaagatgctgtgagcaaccataccatcaatttggctgaggtgactccttgtagccatgaagaagctgacactcggatctttctgcatgtcacgcagcagaagaaggcagcaaagtactcatggtcaaagccagcgacacagatgttctggtcatagcagtgagtgttctgccaaccctccatgagattggtctgcagtagctgCTTTTTCCGACAGGAACTGTGCCTC
gi|5 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataaCTCTTTATCTCATGCAGAAGACCTAGACTGTTGAATCCCTGCCATTCTTTCAGCAGATGAGAACCAGGCATTCCGGGCTGCCCTTAGTGA-GTTGGAAAGCT-CACTCCTGCCAGAAAATCCCAGCTTAC-ACTTTCCTTTATTAGAGACCATTTT-ACCATCCCTGACGATAGAACTGAAGG-TGACACCATCATCATGGGATGGTC--ACACTA-TGAATGAGTC-GCCACCAAGGTACCTCGAAGAAACTTTAGCGAATATGCAG-ACATTGATGTTTT-CCGAGCCATACAGAGGTTATTTGACCAAGTACAAAAAGGACGGAAA-CGTGTTTGAT--CGATCAGCCATCGAGTCTGGAGGCTGAAAGCTAGGTCAAAGCGAGGACGTGGAGTCAGACGCA--GTTACAG-GAAGTGCAAAATTCCCTCAAAC-G--GGAACTTCCTCCGAGGACAATGACAACAAACC---G--A--GTTGTTCAA-CTGCCTGGCTGCCAAAGATTGCACAGATGGCTGCACTAAAGATGGTCATTGTGACCAAAGAagttggtgcaatcaagggaaaaggtgctgaaggaggactgccagcttcttcaagctctttatctcatgcagaagacctagactgttgaatccctgccattctttcagcagatgagaaccaggcattccgggctgcccttagtgagttggaaagctcactcctgccagaaaatcccagcttacactttcctttattagagaccattttaccatccctgacgatagaactgaaggtgacaccatcatcatgggatggtcacactatgaatgagtcgccaccaaggtacctcgaagaaactttagcgaatatgcagacattgatgttttccgagccatacagaggttatttgaccaagtacaaaaaggacggaaacgtgtttgatcgatcagccatcgagtctggaggctgaaagctaggtcaaagcgaggacgtggagtcagacgcagttacaggaagtgcaaaattccctcaaacgggaacttcctccgaggacaatgacaacaaaccgagttgttcaactgcctggctgccaaagattgcacagatggctgcactaaagatggtcattgtgaccaaaga
gi|6 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataactttttccgacaggaactgtgcctcagttggtgcaatcaagggaaaaggtgctgaaggaggactgccagcttcttcaagGCTTTTTCCGA-AAGAACTGT-CCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GA-GCTGAA-GCTAGGTCAAAGCAAGGACATGG----AGACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAGACA--GTTGTTCAATTT-CCTGGCTGAC-AAGATTG--TAGATGGCTGCATCAAAGATGGTCA-TGTGACCAAAAA
gi|7 : atgatgacctgggaacagaagcactcccagctggctcaggagttccagagagggaaatttgtagtacacaaaacaggttgatacttctcagcaaatggccatcgaccaagctcatgagcaggtcaatgctgtctcaaggctgatgggaagcaatcagtgtgactgaagatccatcagcactgaggaagaggatggtagctggtccgaagtcagccacttggttgaacagtatgaggcagcagctggaaccaaagagcacactgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaagctcccccaaaccatgacagatatgggcaatccattccaagaagcaagccgagactgttttcattggacacaaggacattgcccaccacactgcagctgaactttttggcacacaccacgagaaaggaagggtgcgattccagcagttcatgcatggactagaggtgagagaaccaccttctatgacccaatcaagaagaaccaggtaaCTTTTTCCGACAGGAACCGT-CCTC
gi|7 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaaGCTCTTTGCGA-AG---------CTCTATATCTCATGCCAGAA-CCGAGAATGTGACCTCACTG----------------TGAGAACCAAACATTCCCTGCTACCCTGAGTGA-------AAGCTTCAATCCTGTCGGAAA-TCCCAGCTTACTACCATTCggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|7 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccaCA-AGGTTGTTTGACCAAGTACAACA-GGACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|8 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntATACAGATGTTTTCGTGATTGCTGTAAACGTTTT---------CCA-T-----TGG-CTGAGAGAAGCTTTGGCTTGAGTTCAGTCAGGGTAAAAATGTTAGATCGATTCCTGTTCATGA----TG----TTAGTAGCAGGTTGAGCCGAGAA--GAGTCTGCT-GGTATTTTAT-T-TTTTCATGCCTTTTC----TGGTTGTGATAACT--TGTC--AGGTTTCAAAGGCAAAGGGGAAAAGTCTTTATGGCAAA---------------TATTTGTC-CTGATGCT-ACTAATGTGTTTCAAAAAATTG---AGTATATATT-CCCCGGTAC-TGGATGG-ATTA---CCATGCTATTGATATCATCCAGATGTATGTTGTG-TCTT----TGTATGATAGGCCTAGT-----CTTGTCGCAAAAGTT-GAT-GAGGCCAGATTCGACATGTTTGCAAGGAAA-CAACGTTC---ATTTGATG-----TT--ATCCCACCCACAAAAGCAT-CCT--TGAT-TCAGCATACTTAGCGTGCAGCATATCAAGCTGG-TTGTATATGGGCTCAGACATTGG-CA-TGTTTAATGGAAGAAATAAG-TCCCTCTGA-T----TA-GGGTTGG-----AAGCTAAAGGTTAATGTATAGACAG-TTGTATGGTCTGAGCT-TCATCCGATTGCT-GAGTCA-TGCAAGCAGCTTCCAAAATGTGGATG-TAA-GC-AAGA-ATGTCGGTGCCGAT-GTA-AGTGCT------------TTGAGTT-GAGTTTGCCGT---------GTA----------C--T---GC-TCT-A-TAT
gi|9 : CACCGATC----TG-G--CTGGACAC-CAG--AAAGG-CGATCTGT-GGCAGATTCTCTGGACTGAGCTTCCA-CCTATTGCAAGAGAG--TGTCAGCAACTCAC--AGTGTGGATGTCAATGT-CAGACATG---TGG-CGAT-GCAGAATGCTA----A--C--CTT---TTTG-GTACGACCTTACTGGACTGTG----------C--A---GC-TGT-AAGATGC--------GACCA-AGTAAGAACTAAAGAGTTT-A-ACCTCACCTGTCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAAATTGCCTATTGTACTGG-T-ACAGTGTACATATACagttgtcaatgt
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): ACATAATAAATCTTGTAATTGTGTATTTTTTTTCAATTTATGCTAAAAAGTGGTACAAAGAAGCCCTAACATGAATTCAAAGCTATAAATTTCACATCCCCAAGGTCAAAAACATATGATGACACCAAAATCATCCAAATCGGTTTAGAGAATCCAGTTCTGTGGCAAAATATGTGTTTCTTATGCCAGAAATGACGGCCATCTTGAAAAATAGTGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATTTTGGTGCTTGTTTCCGGATTTGAAGATTTTTACAGTTATCTGCTTCACTA
Unaligned ( gi|12 ): ACCTTGATATTTTTTAATTATATCGCTACAATTATCATACAAGGAAGCTTCTAAGTAATTCCAGAGTTCCAAATTCAGCTTCTATATGGTCAGAAATGTGTGATTTGACACCAAAATCAATACTGTAGGACAAATATTTACAATTTTATTGCAAAGAATGATTTTTCATAGCAGAAATGGCGGCCATATTGAAAAAAAGCCACCATCTTGAATTTGTCAGTGGCTTATGCTTTTTTTTCAAAAGTGTAGCTCCCAAGGAGTATTTGTGCTAATTTTGGTGCTTGTTTCCAGATTTGAAAGATTTCTGTGAAATATTCAGTTATCTGCTGCACTA
Unaligned ( gi|14 ): AGCTATAAATTTTACTTCCCCATGGTCAACAGCATATGGTTTGACACCAAAATCATCCAAATCGGTCCAGAGAATTCAGTTCTGTGGCAAAATATGTGTTTCCTATGCCAGAAATGGCGGCCATCTTGAAAAATAGCGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATGTTGGTGATTGTTTCCGGATTTGAAAGATCTTTACAATTATCTGCTTCACTA
Unaligned ( gi|17 ): CGTGCTGGCAACATGGATTTCAGTTGACTTAAACCTTGATTTTTTAATTATATCGCTACAATTATGGTACAAGGAAGCTTCTAAGTAATTTCAGAGTTCCAAATACAGCTTCTGCATGGTCAGAAATGTATGATTTGACACCA
Unaligned ( gi|18 ): CATCCACCTCCGAGACATGATGACTCTGGAACAGAAGCACCCCCAGCTGGCTCAGGAGTTCCAGAGAGGGAAATGTGTTGTACACAAATCAGGTCAATACTTCTCAGCAATGGATCACCGA
Unaligned ( gi|19 ): GCTAATGGGTTTTCTCTAATAAGTTGTCCATGAAGGACATTCATTCAAATTTCGGTGCTTGTTTCCGTATTTAAAAGATTTTTACAGCTATCTGCTTCACTA
Unaligned ( gi|20 ): TTGGTTTAGAAAAGCTTTGGATTCAGTTCGGTCAGAGTAAAAATGTTGAGTGGATACCTGTTCATGTTATGTTAGTAGCAGGGTGAGCCGAGAAGA
Unaligned ( gi|21 ): CATAAATCAGGTCGATACTTCTCAGCAATGGATCACCAA
Alignments
lowQualScore : 1 1 11 1 1 22222 1 1 1 1 1 1 1 1 1 11 1 11 1 222222222 2222 1 111 55555555 11 1 1111 1111 11111 1111 11111 22222222 111 2 11 111 222222 111 111 1111 1 111111 11 1 1 1 1 111111 1 11 1 2222222222 111 111 33333333333333333333333333333 222222222 11
lowQualScore : 3 77777777 0 8 0 8 11 0 0 0 8 0 55555 0 1 0 2 2 0 66 2 0 3 0 0 3 0 0 0 8 1 8 3 2 0 88 55 0 3 55 2 3 1 3 2 0 2 999999999 3 7777 0 000 66 3 33333333 88 3 6 3 8 8 3 6 99 3333 1 2 2 4 3 99 4444 99 99 5 8 66666 0 3 4444 11111 3 5 99999999 44 8 8 8 444 6 0 8 0 11 8 444 333333 777 444 1 8 444 11 8 5 5 7777 8 8 1 0 0 0 3 8 22 222222 3 3 8 11 6 3 1 1 0 8 0 0 0 2 0 3 0 666666 6 777 99 6 6 9 3 6 2 6 11 55 1 77 3 5 5 1 77 5 2222222222 000 222 0 11111111111111111111111111111 5 5 5 777777777 6 6 99 6 888 6 6 1 6 1 2 6 00 1
lowQualScore : . ........ . . . . .. . . . . . ..... . . . . . . .. . . . . . . . . . . . . . . . .. .. . . .. . . . . . . . ......... . .... . ... .. . ........ .. . . . . . . . .. .... . . . . . .. .... .. .. . . ..... . . .... ..... . . ........ .. . . . ... . . . . .. . ... ...... ... ... . . ... .. . . . .... . . . . . . . . .. ...... . . . .. . . . . . . . . . . . . . ...... . ... .. . . . . . . . .. .. . .. . . . . .. . .......... ... ... . ............................. . . . ......... . . .. . ... . . . . . . . .. .
lowQualScore : 3 00000000 0 0 6 0 00 6 8 6 0 8 00000 0 0 0 0 5 0 88 5 0 2 0 0 2 0 0 0 0 4 0 2 5 2 00 00 0 2 22 5 2 0 2 5 0 5 000000000 2 8888 0 000 55 2 00000000 33 3 7 7 0 0 2 7 22 5555 0 0 5 2 2 22 2222 22 22 2 0 22222 8 2 2222 88888 8 0 00000000 88 0 0 0 000 4 8 0 4 00 0 000 000000 444 000 4 2 222 66 0 0 0 0000 0 0 0 8 8 6 2 0 44 222222 8 8 0 00 7 2 0 0 8 0 8 0 0 0 0 2 0 222222 7 555 22 7 7 3 3 7 5 7 88 77 0 77 3 7 7 4 11 7 7777777777 000 111 4 77777777777777777777777777777 7 7 7 888888888 7 7 22 7 777 7 7 7 7 7 5 7 22 7
consensus : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGA--TG-ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-CCATACGA-GG-C-ATTCCTCCTACTCGAGCA-GCTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
Reference ( family-4106 ) : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGA--TG-ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-CCATACGA-GG-C-ATTCCTCCTACTCGAGCA-GCTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
gi|1 : GCTTTTTCCGA-AAGAACTGT-CCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GAG-CTGAA-GCTAGGTCAAAGCAAGGACATGGAG----ACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--ACAGTTGTTCAA-TTTCCTGGCTGAC-AAGATTGTA--GATGGCTGCATCAAAGATGGTCAT-GTGACCAAAAAAAGAAGATGCT-------GTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCACGGAGAAGCTGACATCCGGATCTTTCTGCA-TGCCAAACATGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-AGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTAGGCCAAGGACAGAACACGAGATGGATTACAGTACATGACCTGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TAGCTGCAATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTAGCAAAC--------CTGGGATGTGTGTG-AGGAGGCT-TCTGATGT-CTTCAGCAAACTC---AG-CAGTACC-CACCAGCAAGTAGA--TG-ATGA---CC------TCAAGACCTTGGAGAAGT---TTGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATG-TTGCTCG--AAGCAGAGA-C-----------C-ATTCCTCCTACTCGAGCA-GTTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATGTGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAA-TCCCACCGA-C----TA-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-GCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-T-ACAGTGTACATACAC
gi|10 : CACCAA-C----TGCGGGCTG-AC-C-A-G--AAA---TGA-CTGT-GGCAGATCTTATGGACTGA-CT-CCA--CTAT--CA-GAGAGTATGTCAG-AACTCACCAA----GGATG-CAATGTACAGA-ATGCCGCTGACGAGAGCA-AATGCTA----C--CTTGTT---T---------ACCT---------GTA----------CTTACTCGCACGT-A-GATGC--------GAC-ATTATAG--ACTAA-GAGTTCAT-ACCTCACCTATTT-CACACCGACTGTCAAAACATAAAAAAGTCGAACT--TCTGTCTTACTGACT-TCA-TGT-CATATAC
gi|13 : aTTCAGCA-TACCAAGCATGCAGCAatactacaataaatctgaattgttgtgtcccattggtttttgttcattttttgctaaaacgtagtaccaaagaaggccctaaaccgaattcaaagccataaatttcacttcaccatggtcaaaaacatattgatttgacaccaaaaatcattcaaatcggttccaagatccacgttcttggcaaaataatgtgtttcctatgacagaaatgcgccacttgaaaaagcggccattttgaaaattcaagtggctaatgcggtttttttcaataagtttccaagtaaggacattatagcaaattttggttgcttgtttccggcgatttgaacgatttacaagtatctgcttcacta
gi|13 : ttctgatgttatgaatgtgtttcaaaaatcaagtatacagtgtatatcctcctgtactggatgaccattatattgatatcgtccagatatatgttgtcattgttgtgtctctgtatgattggtcttcaaatgttgaagccatattcaatatgcttggaaggaagcaacgttcatttgatgttatcccacctacaaaagcatcattgaT-GCAGCAT-----ACATG-----TATCAAGCTGG-TTGTATATGGGCTCAGtacatgtatcaagctggttgtatatgggctcagacatgtttaatggaaaaaataagtttttc
gi|15 : ttctgatgttatgaatgtgtttcaaaaatcaagtatacagtgtatatcctcctgtactggatgaccattatattgatatcgtccagatatatgttgtcattgttgtgtctctgtatgattggtcttcaaatgttgaagccatattcaatatgcttggaaggaagcaacgttcatttgatgttatcccacctacaaaagcatcattgattcagcataccaagcaCTGAGTTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCGTGCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTATTCATGGTCAAAGTCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGCTTTGTCTGC-AGCAGCTGTGGATTGCCTT------AGGACAACACACGAGATGGATTCCAGTACATGCCCTGTGCCTCTCCCTTGCA--ATG----GAGAA--GA--CCacatgtttaatggaaaaaataagtttttc
gi|16 : T-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-TAACAGTGTACATACAC
gi|2 : CCATGTAGAAGCTGACACCCGGATTTTTCTGCA-TGCCAAGCACACAGCAGAAAAAG-GCAGC-AAAGTACTCATGTTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCATCCA-TGATATTGGTCTGC-AGCAGCTGTGGATCGCCTTTGACCAAGGTCAGAACACGAGATGGATTCTAGTACATGACCCGTGTCTCTCCCTTGCA--CTG----AAGAA--GA--CCAGA-GGAATTCT-CTT-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGCGTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGC-AGTAGA--TG-ATGATGCCC------TCAAGACTTTGGAAAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-CCATACGA-GG-CTATTCCTCCTACTCGAGCA-GCTC--TACT-GCAGCATGTGAAGCATGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAAGTCCCACCGA-CTGCATG-GGGCTGGAC-CAAAA--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAACTGCCA-CCTATTGCA-GAGAGC-TGTCAACAACTCAACAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGAACGAT-GCA-AATGCTATGGTAACC--GTT---TT-G-GTCTGACCT---------GTACTGGACTGTGC--A---GC-TGT-A-GATGCGGAATGTAGAC-A-TGTAG--ACTAA-GAATTC-T-ACCTCACCTATCTGCACA-CGA-TGTCGAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T---AGTGTGCATACAC
gi|22 : gaccaatagagtggatgttgaggcacaaccagggcacactggtgacaccaC----TGGCTGCGATG--C--TGTCTCAGCATTCCGTGGGtatacgtaataaatcttgtaactgttgtgttcaatgtgtattttgttcattttttgctaaaaggtggtacaaagaagccctaaaacgaattcaaagctataaatttcactttcccatggtcaaaaacatgaattgacaccaaatcatgccaaatcggtccagttcttggtttcctatgccagataatggggcatcttgaaaaatagcggccatattgaaattcaagtggctatatgggtttcttatagcaagttgtccaaggacattatgcaaatttgtgtgcttgtttcctgatgtgataagattttttgcagctatctgcatgcttcactac
gi|3 : AAAAGAAGATGCTCTATTATGTGAGCAACCATGCCCTATTAACCTGCGCTGAGGTGGCTCCTTGTAGACATGAAGAA--CGA-ACCCGGATCTTCTTGCATTGCCAAGCA-GCCACAGAAGAAGAGCAGCAAAAATACTCATGGT-AAAG-CAGCGACA-AAATGTTCTGGTCTCAGCAGTGAGT-TTCTGCCAACCCTCCATTGAGATTGTTCTG--AGCAGCTGTTGATTGTCTT
gi|3 : gTGCCTCTCCCTTGTA--CTG----GAGAATGGA--C-AGACGGAATTCT-C-TGCCTCC--GCCTT-ACAGGATGGCT-CGATG--TGCTGTCTCAGCATTCCGTGGGAAGGG----AAGTCG-TGTGGCAAAC--------CTGGGATG-ATGTGTACGAGGCTGTCTGATGT-ATTCAGCAAACTTTCAAGCGAG-ACCGCACCAGC-AGTAGATGTG-ATGA---CC------TCAAGA-CTTGGAGAA-----TCATGCTCAT--GATGTACGACAGTTCCAG-ACATGCTGATGGT----GTT-GATTGATGCCAGGA-GTACATGTTTGCTCGAAGAGCAGAGA-CCATACGA-GG-C-AT--CCCCTACTCG-GCAGGCTC--TACT-ACAGCATGTGAAGCGTGCTGCC-ACCAGGCCGGCCTGCATA-GGAGTCAGTCGATGGATATTTTCAACCAGAA-ACAC-AA-TGCCACCGA-T----CT-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACGGA-CT-CCA-CCTATT-CA-GAGAGC-TGTCAGCAACTCACC-AGTGTAGA-G--AA-GT-CAGA-ATGCCGTGAACGA--GCA-AATGCTA----C--C--GTT---TT---GTCTGACCT----------TA----------C--A---GC-TGTGA-GATGC---------AC-A-TGTAG--ACTGA-GAGTTC-TAAACTCACCTTTCTGCACA-CGA-TGTC-AAATATGAAACAGT-GAACTTG-CTGTT-TACTGG-T-ACAG-GTACATACACgcctctcccttgtactggagaatggacagacggaattctctgcctccgccttacaggatggctcgatgtgctgtctcagcattccgtgggaagggaagtcgtgtggcaaacctgggatgatgtgtacgaggctgtctgatgtattcagcaaactttcaagcgagaccgcaccagcagtagatgtgatgacctcaagacttggagaatcatgctcatgatgtacgacagttccagacatgctgatggtgttgattgatgccaggagtacatgtttgctcgaagagcagagaccatacgaggcatcccctactcggcaggctctactacagcatgtgaagcgtgctgccaccaggccggcctgcataggagtcagtcgatggatattttcaaccagaaacacaatgccaccgatctgggctggaccaagaaaggcgatctgtggcagatcttctggacggactccacctattcagagagctgtcagcaactcaccagtgtagagaagtcagaatgccgtgaacgagcaaatgctaccgttttgtctgaccttacagctgtgagatgcacatgtagactgagagttctaaactcacctttctgcacacgatgtcaaatatgaaacagtgaacttgctgtttactggtacaggtacatacactatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : gaaaagaagatgctctattatgtgagcaaccatgccctattaacctgcgctgaggtggctccttgtagacatgaagaacgaacccggatcttcttgcattgccaagcagccacagaagaagagcagcaaaaatactcatggtaaagcagcgacaaaatgttctggtctcagcagtgagtttctgccaaccctccattgagattgttctgagcagctgttgattgtctGCTCTTCTCGA-AGA---------TCTTTATCTCATGCCAGAG-CCGAGAATACGACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCAGAAA-TCCCAGCTTACTACCATGCTT-----GAGACCCATGTTACCATCCCTGACG-TAGAACCAGAGGCTGACACCATCATCATTG-ATGGTTCGACACCAGTGAAT-AGTCTGCCACCAAGG-CCCTCGAAGAC-CTTTGAGGAATATGGAGTAC-TTGATGTGCTTCCAA-CCATGCA-AGGTTGTTTGACCAAGTACAACA-GGACGGACCTCGTGTTTGATGTCTATCAGCCATCGAGTCTGAAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGAAAGAGAAGGGCAAAGTTCCCTCAATCTGGCGGAACTTCCTCCGA-GGCAATGACAA-AAAAC--CG--A--GTTGT----------TGGCTGAC-AATATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACC----AAAGAAGATGC-------TGTGAGCAACCATACC--ATCAATTTG-GCTGAGGTGACTCCTTGTAGCCATGAAGAAGCTGACACTCGGATCTTTCTGCA-TGT----CACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGTAGCTGTGGACTGtatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccaTGGA--CTG----GAGAA--TA--CAAGA-GAAATTCT-C-TTCTTTCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAACATTCCGTGGGAA-GGGAAGAAGTCGGTGTGGCAAACTTGCACACCTGGGATGTCTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGTCAGTACC-CACCAGC-AGTA-----G-ATGA---CC------TTGAGAC--------AGT---CAATGATCATCGAATATACGACAGGTCCAGTACA-GCT-AT-GT----GTTAGA-TGAAG-CAGAATGGACA-G-TTGCTCGGAAGGCAGAGACCCATATGA-GGCC-ATTCCTCCTACTCAGACA-GCTCCATACTGGCAGCgagaatacaagagaaattctcttctttcatgccttcactggctgcgatgttgtctcaacattccgtgggaagggaagaagtcggtgtggcaaacttgcacacctgggatgtctgtgacgaggcttctgatgtcttcagcaaactcagtcagtacccaccagcagtagatgaccttgagacagtcaatgatcatcgaatatacgacaggtccagtacagctatgtgttagatgaagcagaatggacagttgctcggaaggcagagacccatatgaggccattcctcctactcagacagctccatactggcagc
gi|5 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccagctcttctcgaagatctttatctcatgccagagccgagaatacgacctcactgccttctttcagcatgagaaccaggcattccctgctgccctgagtgatggtggaaagcttcactcctgtcagaaatcccagcttactaccatgcttgagacccatgttaccatccctgacgtagaaccagaggctgacaccatcatcattgatggttcgacaccagtgaatagtctgccaccaaggccctcgaagacctttgaggaatatggagtacttgatgtgcttccaaccatgcaaggttgtttgaccaagtacaacaggacggacctcgtgtttgatgtctatcagccatcgagtctgaaggctgaagctaggtcaaagcgaggacgtggagccagacgcagggtgaaagagaagggcaaagttccctcaatctggcggaacttcctccgaggcaatgacaaaaaaccgagttgttggctgacaatattgcacagatggctgcaccaaagatggtcattgtgaccaaagaagatgctgtgagcaaccataccatcaatttggctgaggtgactccttgtagccatgaagaagctgacactcggatctttctgcatgtcacgcagcagaagaaggcagcaaagtactcatggtcaaagccagcgacacagatgttctggtcatagcagtgagtgttctgccaaccctccatgagattggtctgcagtagctgCTTTTTCCGACAGGAACTGTGCCTC
gi|5 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataaCTCTTTATCTCATGCAGAAGACCTAGACTGTTGAATCCCTGCCATTCTTTCAGCAGATGAGAACCAGGCATTCCGGGCTGCCCTTAGTGA-GTTGGAAAGCT-CACTCCTGCCAGAAAATCCCAGCTTAC-ACTTTCCTTTATTAGAGACCATTTT-ACCATCCCTGACGATAGAACTGAAGG-TGACACCATCATCATGGGATGGTC--ACACTA-TGAATGAGTC-GCCACCAAGGTACCTCGAAGAAACTTTAGCGAATATGCAG-ACATTGATGTTTT-CCGAGCCATACAGAGGTTATTTGACCAAGTACAAAAAGGACGGAAA-CGTGTTTGAT--CGATCAGCCATCGAGTCTGGAGGCTGAAAGCTAGGTCAAAGCGAGGACGTGGAGTCAGACGCA--GTTACAG-GAAGTGCAAAATTCCCTCAAAC-G--GGAACTTCCTCCGAGGACAATGACAACAAACC---G--A--GTTGTTCAA-CTGCCTGGCTGCCAAAGATTGCACAGATGGCTGCACTAAAGATGGTCATTGTGACCAAAGAagttggtgcaatcaagggaaaaggtgctgaaggaggactgccagcttcttcaagctctttatctcatgcagaagacctagactgttgaatccctgccattctttcagcagatgagaaccaggcattccgggctgcccttagtgagttggaaagctcactcctgccagaaaatcccagcttacactttcctttattagagaccattttaccatccctgacgatagaactgaaggtgacaccatcatcatgggatggtcacactatgaatgagtcgccaccaaggtacctcgaagaaactttagcgaatatgcagacattgatgttttccgagccatacagaggttatttgaccaagtacaaaaaggacggaaacgtgtttgatcgatcagccatcgagtctggaggctgaaagctaggtcaaagcgaggacgtggagtcagacgcagttacaggaagtgcaaaattccctcaaacgggaacttcctccgaggacaatgacaacaaaccgagttgttcaactgcctggctgccaaagattgcacagatggctgcactaaagatggtcattgtgaccaaaga
gi|6 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataactttttccgacaggaactgtgcctcagttggtgcaatcaagggaaaaggtgctgaaggaggactgccagcttcttcaagGCTTTTTCCGA-AAGAACTGT-CCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GA-GCTGAA-GCTAGGTCAAAGCAAGGACATGG----AGACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAGACA--GTTGTTCAATTT-CCTGGCTGAC-AAGATTG--TAGATGGCTGCATCAAAGATGGTCA-TGTGACCAAAAA
gi|7 : atgatgacctgggaacagaagcactcccagctggctcaggagttccagagagggaaatttgtagtacacaaaacaggttgatacttctcagcaaatggccatcgaccaagctcatgagcaggtcaatgctgtctcaaggctgatgggaagcaatcagtgtgactgaagatccatcagcactgaggaagaggatggtagctggtccgaagtcagccacttggttgaacagtatgaggcagcagctggaaccaaagagcacactgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaagctcccccaaaccatgacagatatgggcaatccattccaagaagcaagccgagactgttttcattggacacaaggacattgcccaccacactgcagctgaactttttggcacacaccacgagaaaggaagggtgcgattccagcagttcatgcatggactagaggtgagagaaccaccttctatgacccaatcaagaagaaccaggtaaCTTTTTCCGACAGGAACCGT-CCTC
gi|7 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaaGCTCTTTGCGA-AG---------CTCTATATCTCATGCCAGAA-CCGAGAATGTGACCTCACTG----------------TGAGAACCAAACATTCCCTGCTACCCTGAGTGA-------AAGCTTCAATCCTGTCGGAAA-TCCCAGCTTACTACCATTCggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|7 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccaCA-AGGTTGTTTGACCAAGTACAACA-GGACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|8 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntATACAGATGTTTTCGTGATTGCTGTAAACGTTTT---------CCA-T-----TGG-CTGAGAGAAGCTTTGGCTTGAGTTCAGTCAGGGTAAAAATGTTAGATCGATTCCTGTTCATGA----TG----TTAGTAGCAGGTTGAGCCGAGAA--GAGTCTGCT-GGTATTTTAT-T-TTTTCATGCCTTTTC----TGGTTGTGATAACT--TGTC--AGGTTTCAAAGGCAAAGGGGAAAAGTCTTTATGGCAAA---------------TATTTGTC-CTGATGCT-ACTAATGTGTTTCAAAAAATTG---AGTATATATT-CCCCGGTAC-TGGA--TGGATTA---CCATGCTATTGATATCATCCAGATGTATGTTGTG-TCTT----TGTATGATAGGCCTAGT-----CTTGTCGCAAAAGTT-GA-TGAGGCCAGATTCGACATGTTTGCAAGGAAA-CAACGT-TCATTTGATGT-T-ATCCCACCCACAAAAGCA-TCCT--TGAT-TCAGCATACTTAGCGTGCAGCATATCAAGCTGG-TTGTATATGGGCTCAGACATTGG-CA-TGTTTAATGGAAGAAATAAG-TCCCTCTGA-T----TA-GGGTTGG-----AAGCTAAAGGTTAATGTATAGACAG-TTGTATGGTCTGAGCT-TCATCCGATTGCT-GAGTCA-TGCAAGCAGCTTCCAAAATGTGGATG-TAA-GC-AAGA-ATGTCGGTGCCGAT-GTA-AGTGCT------------TTGAGTT-GAGTTTGCCGT---------GTA----------C--T---GC-TCT-A-TAT
gi|9 : CACCGATC----TG-G--CTGGACAC-CAG--AAAGG-CGATCTGT-GGCAGATTCTCTGGACTGAGCTTCCA-CCTATTGCAAGAGAG--TGTCAGCAACTCAC--AGTGTGGATGTCAATGT-CAGACATG---TGG-CGAT-GCAGAATGCTA----A--C--CTT---TTTG-GTACGACCTTACTGGACTGTG----------C--A---GC-TGT-AAGATGC--------GACCA-AGTAAGAACTAAAGAGTTT-A-ACCTCACCTGTCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAAATTGCCTATTGTACTGG-T-ACAGTGTACATATACagttgtcaatgt
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): ACATAATAAATCTTGTAATTGTGTATTTTTTTTCAATTTATGCTAAAAAGTGGTACAAAGAAGCCCTAACATGAATTCAAAGCTATAAATTTCACATCCCCAAGGTCAAAAACATATGATGACACCAAAATCATCCAAATCGGTTTAGAGAATCCAGTTCTGTGGCAAAATATGTGTTTCTTATGCCAGAAATGACGGCCATCTTGAAAAATAGTGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATTTTGGTGCTTGTTTCCGGATTTGAAGATTTTTACAGTTATCTGCTTCACTA
Unaligned ( gi|12 ): ACCTTGATATTTTTTAATTATATCGCTACAATTATCATACAAGGAAGCTTCTAAGTAATTCCAGAGTTCCAAATTCAGCTTCTATATGGTCAGAAATGTGTGATTTGACACCAAAATCAATACTGTAGGACAAATATTTACAATTTTATTGCAAAGAATGATTTTTCATAGCAGAAATGGCGGCCATATTGAAAAAAAGCCACCATCTTGAATTTGTCAGTGGCTTATGCTTTTTTTTCAAAAGTGTAGCTCCCAAGGAGTATTTGTGCTAATTTTGGTGCTTGTTTCCAGATTTGAAAGATTTCTGTGAAATATTCAGTTATCTGCTGCACTA
Unaligned ( gi|14 ): AGCTATAAATTTTACTTCCCCATGGTCAACAGCATATGGTTTGACACCAAAATCATCCAAATCGGTCCAGAGAATTCAGTTCTGTGGCAAAATATGTGTTTCCTATGCCAGAAATGGCGGCCATCTTGAAAAATAGCGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATGTTGGTGATTGTTTCCGGATTTGAAAGATCTTTACAATTATCTGCTTCACTA
Unaligned ( gi|17 ): CGTGCTGGCAACATGGATTTCAGTTGACTTAAACCTTGATTTTTTAATTATATCGCTACAATTATGGTACAAGGAAGCTTCTAAGTAATTTCAGAGTTCCAAATACAGCTTCTGCATGGTCAGAAATGTATGATTTGACACCA
Unaligned ( gi|18 ): CATCCACCTCCGAGACATGATGACTCTGGAACAGAAGCACCCCCAGCTGGCTCAGGAGTTCCAGAGAGGGAAATGTGTTGTACACAAATCAGGTCAATACTTCTCAGCAATGGATCACCGA
Unaligned ( gi|19 ): GCTAATGGGTTTTCTCTAATAAGTTGTCCATGAAGGACATTCATTCAAATTTCGGTGCTTGTTTCCGTATTTAAAAGATTTTTACAGCTATCTGCTTCACTA
Unaligned ( gi|20 ): TTGGTTTAGAAAAGCTTTGGATTCAGTTCGGTCAGAGTAAAAATGTTGAGTGGATACCTGTTCATGTTATGTTAGTAGCAGGGTGAGCCGAGAAGA
Unaligned ( gi|21 ): CATAAATCAGGTCGATACTTCTCAGCAATGGATCACCAA
Alignments
lowQualScore : 1 1 11 1 1 22222 1 1 1 1 1 1 1 1 1 11 1 11 1 222222222 2222 1 111 55555555 11 1 1111 1111 11111 1111 11111 22222222 111 2 11 111 222222 111 111 1111 1 111111 11 1 1 1 1 111111 1 11 1 2222222222 111 111 33333333333333333333333333333 222222222 11
lowQualScore : 3 77777777 0 8 0 8 11 0 0 0 8 0 55555 0 1 0 2 2 0 66 2 0 3 0 0 3 0 0 0 8 1 8 3 2 0 88 55 0 3 55 2 3 1 3 2 0 2 999999999 3 7777 0 000 66 3 33333333 88 3 6 3 8 8 3 6 99 3333 1 2 2 4 3 99 4444 99 99 5 8 66666 0 3 4444 11111 3 5 99999999 44 8 8 8 444 6 0 8 0 11 8 444 333333 777 444 1 8 444 11 8 5 5 7777 8 8 1 0 0 0 3 8 22 222222 3 3 8 11 6 3 1 1 0 8 0 0 0 2 0 3 0 666666 6 777 99 6 6 9 3 6 2 6 11 55 1 77 3 5 5 1 77 5 2222222222 000 222 0 11111111111111111111111111111 5 5 5 777777777 6 6 99 6 888 6 6 1 6 1 2 6 00 1
lowQualScore : . ........ . . . . .. . . . . . ..... . . . . . . .. . . . . . . . . . . . . . . . .. .. . . .. . . . . . . . ......... . .... . ... .. . ........ .. . . . . . . . .. .... . . . . . .. .... .. .. . . ..... . . .... ..... . . ........ .. . . . ... . . . . .. . ... ...... ... ... . . ... .. . . . .... . . . . . . . . .. ...... . . . .. . . . . . . . . . . . . . ...... . ... .. . . . . . . . .. .. . .. . . . . .. . .......... ... ... . ............................. . . . ......... . . .. . ... . . . . . . . .. .
lowQualScore : 3 00000000 0 0 6 0 00 6 8 6 0 8 00000 0 0 0 0 5 0 88 5 0 2 0 0 2 0 0 0 0 4 0 2 5 2 00 00 0 2 22 5 2 0 2 5 0 5 000000000 2 8888 0 000 55 2 00000000 33 3 7 7 0 0 2 7 22 5555 0 0 5 2 2 22 2222 22 22 2 0 22222 8 2 2222 88888 8 0 00000000 88 0 0 0 000 4 8 0 4 00 0 000 000000 444 000 4 2 222 66 0 0 0 0000 0 0 0 8 8 6 2 0 44 222222 8 8 0 00 7 2 0 0 8 0 8 0 0 0 0 2 0 222222 7 555 22 7 7 3 3 7 5 7 88 77 0 77 3 7 7 4 11 7 7777777777 000 111 4 77777777777777777777777777777 7 7 7 888888888 7 7 22 7 777 7 7 7 7 7 5 7 22 7
consensus : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGA--TG-ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-CCATACGA-GG-C-ATTCCTCCTACTCGAGCA-GCTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
Reference ( family-4106 ) : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGA--TG-ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-CCATACGA-GG-C-ATTCCTCCTACTCGAGCA-GCTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
gi|1 : GCTTTTTCCGA-AAGAACTGT-CCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GAG-CTGAA-GCTAGGTCAAAGCAAGGACATGGAG----ACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--ACAGTTGTTCAA-TTTCCTGGCTGAC-AAGATTGTA--GATGGCTGCATCAAAGATGGTCAT-GTGACCAAAAAAAGAAGATGCT-------GTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCACGGAGAAGCTGACATCCGGATCTTTCTGCA-TGCCAAACATGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-AGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTAGGCCAAGGACAGAACACGAGATGGATTACAGTACATGACCTGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TAGCTGCAATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTAGCAAAC--------CTGGGATGTGTGTG-AGGAGGCT-TCTGATGT-CTTCAGCAAACTC---AG-CAGTACC-CACCAGCAAGTAGA--TG-ATGA---CC------TCAAGACCTTGGAGAAGT---TTGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATG-TTGCTCG--AAGCAGAGA-C-----------C-ATTCCTCCTACTCGAGCA-GTTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATGTGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAA-TCCCACCGA-C----TA-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-GCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-T-ACAGTGTACATACAC
gi|10 : CACCAA-C----TGCGGGCTG-AC-C-A-G--AAA---TGA-CTGT-GGCAGATCTTATGGACTGA-CT-CCA--CTAT--CA-GAGAGTATGTCAG-AACTCACCAA----GGATG-CAATGTACAGA-ATGCCGCTGACGAGAGCA-AATGCTA----C--CTTGTT---T---------ACCT---------GTA----------CTTACTCGCACGT-A-GATGC--------GAC-ATTATAG--ACTAA-GAGTTCAT-ACCTCACCTATTT-CACACCGACTGTCAAAACATAAAAAAGTCGAACT--TCTGTCTTACTGACT-TCA-TGT-CATATAC
gi|13 : aTTCAGCA-TACCAAGCATGCAGCAatactacaataaatctgaattgttgtgtcccattggtttttgttcattttttgctaaaacgtagtaccaaagaaggccctaaaccgaattcaaagccataaatttcacttcaccatggtcaaaaacatattgatttgacaccaaaaatcattcaaatcggttccaagatccacgttcttggcaaaataatgtgtttcctatgacagaaatgcgccacttgaaaaagcggccattttgaaaattcaagtggctaatgcggtttttttcaataagtttccaagtaaggacattatagcaaattttggttgcttgtttccggcgatttgaacgatttacaagtatctgcttcacta
gi|13 : ttctgatgttatgaatgtgtttcaaaaatcaagtatacagtgtatatcctcctgtactggatgaccattatattgatatcgtccagatatatgttgtcattgttgtgtctctgtatgattggtcttcaaatgttgaagccatattcaatatgcttggaaggaagcaacgttcatttgatgttatcccacctacaaaagcatcattgaT-GCAGCAT-----ACATG-----TATCAAGCTGG-TTGTATATGGGCTCAGtacatgtatcaagctggttgtatatgggctcagacatgtttaatggaaaaaataagtttttc
gi|15 : ttctgatgttatgaatgtgtttcaaaaatcaagtatacagtgtatatcctcctgtactggatgaccattatattgatatcgtccagatatatgttgtcattgttgtgtctctgtatgattggtcttcaaatgttgaagccatattcaatatgcttggaaggaagcaacgttcatttgatgttatcccacctacaaaagcatcattgattcagcataccaagcaCTGAGTTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCGTGCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTATTCATGGTCAAAGTCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGCTTTGTCTGC-AGCAGCTGTGGATTGCCTT------AGGACAACACACGAGATGGATTCCAGTACATGCCCTGTGCCTCTCCCTTGCA--ATG----GAGAA--GA--CCacatgtttaatggaaaaaataagtttttc
gi|16 : T-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-TAACAGTGTACATACAC
gi|2 : CCATGTAGAAGCTGACACCCGGATTTTTCTGCA-TGCCAAGCACACAGCAGAAAAAG-GCAGC-AAAGTACTCATGTTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCATCCA-TGATATTGGTCTGC-AGCAGCTGTGGATCGCCTTTGACCAAGGTCAGAACACGAGATGGATTCTAGTACATGACCCGTGTCTCTCCCTTGCA--CTG----AAGAA--GA--CCAGA-GGAATTCT-CTT-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGCGTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGC-AGTAGA--TG-ATGATGCCC------TCAAGACTTTGGAAAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-CCATACGA-GG-CTATTCCTCCTACTCGAGCA-GCTC--TACT-GCAGCATGTGAAGCATGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAAGTCCCACCGA-CTGCATG-GGGCTGGAC-CAAAA--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAACTGCCA-CCTATTGCA-GAGAGC-TGTCAACAACTCAACAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGAACGAT-GCA-AATGCTATGGTAACC--GTT---TT-G-GTCTGACCT---------GTACTGGACTGTGC--A---GC-TGT-A-GATGCGGAATGTAGAC-A-TGTAG--ACTAA-GAATTC-T-ACCTCACCTATCTGCACA-CGA-TGTCGAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T---AGTGTGCATACAC
gi|22 : gaccaatagagtggatgttgaggcacaaccagggcacactggtgacaccaC----TGGCTGCGATG--C--TGTCTCAGCATTCCGTGGGtatacgtaataaatcttgtaactgttgtgttcaatgtgtattttgttcattttttgctaaaaggtggtacaaagaagccctaaaacgaattcaaagctataaatttcactttcccatggtcaaaaacatgaattgacaccaaatcatgccaaatcggtccagttcttggtttcctatgccagataatggggcatcttgaaaaatagcggccatattgaaattcaagtggctatatgggtttcttatagcaagttgtccaaggacattatgcaaatttgtgtgcttgtttcctgatgtgataagattttttgcagctatctgcatgcttcactac
gi|3 : AAAAGAAGATGCTCTATTATGTGAGCAACCATGCCCTATTAACCTGCGCTGAGGTGGCTCCTTGTAGACATGAAGAA--CGA-ACCCGGATCTTCTTGCATTGCCAAGCA-GCCACAGAAGAAGAGCAGCAAAAATACTCATGGT-AAAG-CAGCGACA-AAATGTTCTGGTCTCAGCAGTGAGT-TTCTGCCAACCCTCCATTGAGATTGTTCTG--AGCAGCTGTTGATTGTCTT
gi|3 : gTGCCTCTCCCTTGTA--CTG----GAGAATGGA--C-AGACGGAATTCT-C-TGCCTCC--GCCTT-ACAGGATGGCT-CGATG--TGCTGTCTCAGCATTCCGTGGGAAGGG----AAGTCG-TGTGGCAAAC--------CTGGGATG-ATGTGTACGAGGCTGTCTGATGT-ATTCAGCAAACTTTCAAGCGAG-ACCGCACCAGC-AGTAGATGTG-ATGA---CC------TCAAGA-CTTGGAGAA-----TCATGCTCAT--GATGTACGACAGTTCCAG-ACATGCTGATGGT----GTT-GATTGATGCCAGGA-GTACATGTTTGCTCGAAGAGCAGAGA-CCATACGA-GG-C-AT--CCCCTACTCG-GCAGGCTC--TACT-ACAGCATGTGAAGCGTGCTGCC-ACCAGGCCGGCCTGCATA-GGAGTCAGTCGATGGATATTTTCAACCAGAA-ACAC-AA-TGCCACCGA-T----CT-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACGGA-CT-CCA-CCTATT-CA-GAGAGC-TGTCAGCAACTCACC-AGTGTAGA-G--AA-GT-CAGA-ATGCCGTGAACGA--GCA-AATGCTA----C--C--GTT---TT---GTCTGACCT----------TA----------C--A---GC-TGTGA-GATGC---------AC-A-TGTAG--ACTGA-GAGTTC-TAAACTCACCTTTCTGCACA-CGA-TGTC-AAATATGAAACAGT-GAACTTG-CTGTT-TACTGG-T-ACAG-GTACATACACgcctctcccttgtactggagaatggacagacggaattctctgcctccgccttacaggatggctcgatgtgctgtctcagcattccgtgggaagggaagtcgtgtggcaaacctgggatgatgtgtacgaggctgtctgatgtattcagcaaactttcaagcgagaccgcaccagcagtagatgtgatgacctcaagacttggagaatcatgctcatgatgtacgacagttccagacatgctgatggtgttgattgatgccaggagtacatgtttgctcgaagagcagagaccatacgaggcatcccctactcggcaggctctactacagcatgtgaagcgtgctgccaccaggccggcctgcataggagtcagtcgatggatattttcaaccagaaacacaatgccaccgatctgggctggaccaagaaaggcgatctgtggcagatcttctggacggactccacctattcagagagctgtcagcaactcaccagtgtagagaagtcagaatgccgtgaacgagcaaatgctaccgttttgtctgaccttacagctgtgagatgcacatgtagactgagagttctaaactcacctttctgcacacgatgtcaaatatgaaacagtgaacttgctgtttactggtacaggtacatacactatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : gaaaagaagatgctctattatgtgagcaaccatgccctattaacctgcgctgaggtggctccttgtagacatgaagaacgaacccggatcttcttgcattgccaagcagccacagaagaagagcagcaaaaatactcatggtaaagcagcgacaaaatgttctggtctcagcagtgagtttctgccaaccctccattgagattgttctgagcagctgttgattgtctGCTCTTCTCGA-AGA---------TCTTTATCTCATGCCAGAG-CCGAGAATACGACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCAGAAA-TCCCAGCTTACTACCATGCTT-----GAGACCCATGTTACCATCCCTGACG-TAGAACCAGAGGCTGACACCATCATCATTG-ATGGTTCGACACCAGTGAAT-AGTCTGCCACCAAGG-CCCTCGAAGAC-CTTTGAGGAATATGGAGTAC-TTGATGTGCTTCCAA-CCATGCA-AGGTTGTTTGACCAAGTACAACA-GGACGGACCTCGTGTTTGATGTCTATCAGCCATCGAGTCTGAAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGAAAGAGAAGGGCAAAGTTCCCTCAATCTGGCGGAACTTCCTCCGA-GGCAATGACAA-AAAAC--CG--A--GTTGT----------TGGCTGAC-AATATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACC----AAAGAAGATGC-------TGTGAGCAACCATACC--ATCAATTTG-GCTGAGGTGACTCCTTGTAGCCATGAAGAAGCTGACACTCGGATCTTTCTGCA-TGT----CACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGTAGCTGTGGACTGtatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccaTGGA--CTG----GAGAA--TA--CAAGA-GAAATTCT-C-TTCTTTCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAACATTCCGTGGGAA-GGGAAGAAGTCGGTGTGGCAAACTTGCACACCTGGGATGTCTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGTCAGTACC-CACCAGC-AGTA-----G-ATGA---CC------TTGAGAC--------AGT---CAATGATCATCGAATATACGACAGGTCCAGTACA-GCT-AT-GT----GTTAGA-TGAAG-CAGAATGGACA-G-TTGCTCGGAAGGCAGAGACCCATATGA-GGCC-ATTCCTCCTACTCAGACA-GCTCCATACTGGCAGCgagaatacaagagaaattctcttctttcatgccttcactggctgcgatgttgtctcaacattccgtgggaagggaagaagtcggtgtggcaaacttgcacacctgggatgtctgtgacgaggcttctgatgtcttcagcaaactcagtcagtacccaccagcagtagatgaccttgagacagtcaatgatcatcgaatatacgacaggtccagtacagctatgtgttagatgaagcagaatggacagttgctcggaaggcagagacccatatgaggccattcctcctactcagacagctccatactggcagc
gi|5 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccagctcttctcgaagatctttatctcatgccagagccgagaatacgacctcactgccttctttcagcatgagaaccaggcattccctgctgccctgagtgatggtggaaagcttcactcctgtcagaaatcccagcttactaccatgcttgagacccatgttaccatccctgacgtagaaccagaggctgacaccatcatcattgatggttcgacaccagtgaatagtctgccaccaaggccctcgaagacctttgaggaatatggagtacttgatgtgcttccaaccatgcaaggttgtttgaccaagtacaacaggacggacctcgtgtttgatgtctatcagccatcgagtctgaaggctgaagctaggtcaaagcgaggacgtggagccagacgcagggtgaaagagaagggcaaagttccctcaatctggcggaacttcctccgaggcaatgacaaaaaaccgagttgttggctgacaatattgcacagatggctgcaccaaagatggtcattgtgaccaaagaagatgctgtgagcaaccataccatcaatttggctgaggtgactccttgtagccatgaagaagctgacactcggatctttctgcatgtcacgcagcagaagaaggcagcaaagtactcatggtcaaagccagcgacacagatgttctggtcatagcagtgagtgttctgccaaccctccatgagattggtctgcagtagctgCTTTTTCCGACAGGAACTGTGCCTC
gi|5 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataaCTCTTTATCTCATGCAGAAGACCTAGACTGTTGAATCCCTGCCATTCTTTCAGCAGATGAGAACCAGGCATTCCGGGCTGCCCTTAGTGA-GTTGGAAAGCT-CACTCCTGCCAGAAAATCCCAGCTTAC-ACTTTCCTTTATTAGAGACCATTTT-ACCATCCCTGACGATAGAACTGAAGG-TGACACCATCATCATGGGATGGTC--ACACTA-TGAATGAGTC-GCCACCAAGGTACCTCGAAGAAACTTTAGCGAATATGCAG-ACATTGATGTTTT-CCGAGCCATACAGAGGTTATTTGACCAAGTACAAAAAGGACGGAAA-CGTGTTTGAT--CGATCAGCCATCGAGTCTGGAGGCTGAAAGCTAGGTCAAAGCGAGGACGTGGAGTCAGACGCA--GTTACAG-GAAGTGCAAAATTCCCTCAAAC-G--GGAACTTCCTCCGAGGACAATGACAACAAACC---G--A--GTTGTTCAA-CTGCCTGGCTGCCAAAGATTGCACAGATGGCTGCACTAAAGATGGTCATTGTGACCAAAGAagttggtgcaatcaagggaaaaggtgctgaaggaggactgccagcttcttcaagctctttatctcatgcagaagacctagactgttgaatccctgccattctttcagcagatgagaaccaggcattccgggctgcccttagtgagttggaaagctcactcctgccagaaaatcccagcttacactttcctttattagagaccattttaccatccctgacgatagaactgaaggtgacaccatcatcatgggatggtcacactatgaatgagtcgccaccaaggtacctcgaagaaactttagcgaatatgcagacattgatgttttccgagccatacagaggttatttgaccaagtacaaaaaggacggaaacgtgtttgatcgatcagccatcgagtctggaggctgaaagctaggtcaaagcgaggacgtggagtcagacgcagttacaggaagtgcaaaattccctcaaacgggaacttcctccgaggacaatgacaacaaaccgagttgttcaactgcctggctgccaaagattgcacagatggctgcactaaagatggtcattgtgaccaaaga
gi|6 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataactttttccgacaggaactgtgcctcagttggtgcaatcaagggaaaaggtgctgaaggaggactgccagcttcttcaagGCTTTTTCCGA-AAGAACTGT-CCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GA-GCTGAA-GCTAGGTCAAAGCAAGGACATGG----AGACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAGACA--GTTGTTCAATTT-CCTGGCTGAC-AAGATTG--TAGATGGCTGCATCAAAGATGGTCA-TGTGACCAAAAA
gi|7 : atgatgacctgggaacagaagcactcccagctggctcaggagttccagagagggaaatttgtagtacacaaaacaggttgatacttctcagcaaatggccatcgaccaagctcatgagcaggtcaatgctgtctcaaggctgatgggaagcaatcagtgtgactgaagatccatcagcactgaggaagaggatggtagctggtccgaagtcagccacttggttgaacagtatgaggcagcagctggaaccaaagagcacactgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaagctcccccaaaccatgacagatatgggcaatccattccaagaagcaagccgagactgttttcattggacacaaggacattgcccaccacactgcagctgaactttttggcacacaccacgagaaaggaagggtgcgattccagcagttcatgcatggactagaggtgagagaaccaccttctatgacccaatcaagaagaaccaggtaaCTTTTTCCGACAGGAACCGT-CCTC
gi|7 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaaGCTCTTTGCGA-AG---------CTCTATATCTCATGCCAGAA-CCGAGAATGTGACCTCACTG----------------TGAGAACCAAACATTCCCTGCTACCCTGAGTGA-------AAGCTTCAATCCTGTCGGAAA-TCCCAGCTTACTACCATTCggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|7 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccaCA-AGGTTGTTTGACCAAGTACAACA-GGACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|8 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntATACAGATGTTTTCGTGATTGCTGTAAACGTTTT---------CCA-T-----TGG-CTGAGAGAAGCTTTGGCTTGAGTTCAGTCAGGGTAAAAATGTTAGATCGATTCCTGTTCATGA----TG----TTAGTAGCAGGTTGAGCCGAGAA--GAGTCTGCT-GGTATTTTAT-T-TTTTCATGCCTTTTC----TGGTTGTGATAACT--TGTC--AGGTTTCAAAGGCAAAGGGGAAAAGTCTTTATGGCAAA---------------TATTTGTC-CTGATGCT-ACTAATGTGTTTCAAAAAATTG---AGTATATATT-CCCCGGTAC-TGGA--TGGATTA---CCATGCTATTGATATCATCCAGATGTATGTTGTG-TCTT----TGTATGATAGGCCTAGT-----CTTGTCGCAAAAGTT-GA-TGAGGCCAGATTCGACATGTTTGCAAGGAAA-CAACGT-TCATTTGATGT-T-ATCCCACCCACAAAAGCA-TCCT--TGAT-TCAGCATACTTAGCGTGCAGCATATCAAGCTGG-TTGTATATGGGCTCAGACATTGG-CA-TGTTTAATGGAAGAAATAAG-TCCCTCTGA-T----TA-GGGTTGG-----AAGCTAAAGGTTAATGTATAGACAG-TTGTATGGTCTGAGCT-TCATCCGATTGCT-GAGTCA-TGCAAGCAGCTTCCAAAATGTGGATG-TAA-GC-AAGA-ATGTCGGTGCCGAT-GTA-AGTGCT------------TTGAGTT-GAGTTTGCCGT---------GTA----------C--T---GC-TCT-A-TAT
gi|9 : CACCGATC----TG-G--CTGGACAC-CAG--AAAGG-CGATCTGT-GGCAGATTCTCTGGACTGAGCTTCCA-CCTATTGCAAGAGAG--TGTCAGCAACTCAC--AGTGTGGATGTCAATGT-CAGACATG---TGG-CGAT-GCAGAATGCTA----A--C--CTT---TTTG-GTACGACCTTACTGGACTGTG----------C--A---GC-TGT-AAGATGC--------GACCA-AGTAAGAACTAAAGAGTTT-A-ACCTCACCTGTCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAAATTGCCTATTGTACTGG-T-ACAGTGTACATATACagttgtcaatgt
blockSeqs : C GAACTGTG G A A GA T T A TATTA T C A A C G CG G G T T A T A T G G T A T G TG GG A A CC G A C T G G C GGAGACA T CTG A CAC TT A TCTATTAT CT C T T A A T T AG TGAC A A C T C GG AGCC TG GT C C CTT C AGGA TGC A G TTGCACAC CG T G G TCA C G A TG G TGC ATGCTA CTT ATG C G CGA TA T G G AAAA A T T T G C AC GGCT T A G CA G G A T C A T A G A G CTGCA C CA CT T A A G T G A TA CA G TC T A C A GA G TGGTAACC GAG GA GTACTGGACTGTGCA A G A GGAATGTAG C T GA A AT C C A C T T C AA A
blockSeqs : C GAACTGT G . . . T T . . . C . G C . CA G . T . . T . . . . T . T G TG GG . A TC G A C T G . C CGA T TTT . CAC TT A T . . . C . . C . C CAGT T A C C T . . . . C . CTG C . ACT G G . TC . . . . C . . . . . . TCA . C C G TA . G G . . . T T A . AC GGCC T G . . . G A T . . . A . A . TC . AC . . . G T . G . C CA G C T . . A T . CCTT . TG TACTGGACTGTGCA . . . G . . . . TA . . A . T G . T G
blockSeqs : . GAACCGT G . . . . T . . . A . A . . . . . . . . . . . . . A . . . . G . . . . . A . . . . GA . . . T T . . C . . C . C . T G . . C . . . . A . CTT T . T A T . TT . . . . T . . . . . . CT . A A G A . T C . . . A T G . AT TGTT C A . . . A T A . . . G . . . C . C . . . G . . G . C AA A C . . . A T . AC . G GTACTTACTC . . . A . . . . T . . G . T G . A A
blockSeqs : . A . . . . . . . . T . . C . . . . C . . . . . T . ATT . . C . . . A . . . . T . . . . . . C . T . . T . . . . . . G . G . TT GGC . . . . . . . . . T . C . . . . . . . . A C G T . . . A T . CC . G GTACA . . . G . . . . T . . A . C G . A A
blockSeqs : . . . . . . . . . . . . T . T . . . . . . . . . . . . . . . . . C T . AC . . GTACT . . . . . . . . A . . . . . . . . .
blockSeqs : . . . . . . . . TACA . . .
blockSeqCons : CTT** TA AC GGCT**
originalCons : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCT-C-T-CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGA--TG-ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-CCATACGA-GG-C-ATTCCTCCTACTCGAGCA-GCTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
finalCons : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCTCTT--CTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAAAC--------CTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGA--TG-ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GA-TGATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-CCATACGAGGCT--ATTCCTCCTACTCGAGCA-GCTC--TACT-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): ACATAATAAATCTTGTAATTGTGTATTTTTTTTCAATTTATGCTAAAAAGTGGTACAAAGAAGCCCTAACATGAATTCAAAGCTATAAATTTCACATCCCCAAGGTCAAAAACATATGATGACACCAAAATCATCCAAATCGGTTTAGAGAATCCAGTTCTGTGGCAAAATATGTGTTTCTTATGCCAGAAATGACGGCCATCTTGAAAAATAGTGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATTTTGGTGCTTGTTTCCGGATTTGAAGATTTTTACAGTTATCTGCTTCACTA
Unaligned ( gi|12 ): ACCTTGATATTTTTTAATTATATCGCTACAATTATCATACAAGGAAGCTTCTAAGTAATTCCAGAGTTCCAAATTCAGCTTCTATATGGTCAGAAATGTGTGATTTGACACCAAAATCAATACTGTAGGACAAATATTTACAATTTTATTGCAAAGAATGATTTTTCATAGCAGAAATGGCGGCCATATTGAAAAAAAGCCACCATCTTGAATTTGTCAGTGGCTTATGCTTTTTTTTCAAAAGTGTAGCTCCCAAGGAGTATTTGTGCTAATTTTGGTGCTTGTTTCCAGATTTGAAAGATTTCTGTGAAATATTCAGTTATCTGCTGCACTA
Unaligned ( gi|14 ): AGCTATAAATTTTACTTCCCCATGGTCAACAGCATATGGTTTGACACCAAAATCATCCAAATCGGTCCAGAGAATTCAGTTCTGTGGCAAAATATGTGTTTCCTATGCCAGAAATGGCGGCCATCTTGAAAAATAGCGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATGTTGGTGATTGTTTCCGGATTTGAAAGATCTTTACAATTATCTGCTTCACTA
Unaligned ( gi|17 ): CGTGCTGGCAACATGGATTTCAGTTGACTTAAACCTTGATTTTTTAATTATATCGCTACAATTATGGTACAAGGAAGCTTCTAAGTAATTTCAGAGTTCCAAATACAGCTTCTGCATGGTCAGAAATGTATGATTTGACACCA
Unaligned ( gi|18 ): CATCCACCTCCGAGACATGATGACTCTGGAACAGAAGCACCCCCAGCTGGCTCAGGAGTTCCAGAGAGGGAAATGTGTTGTACACAAATCAGGTCAATACTTCTCAGCAATGGATCACCGA
Unaligned ( gi|19 ): GCTAATGGGTTTTCTCTAATAAGTTGTCCATGAAGGACATTCATTCAAATTTCGGTGCTTGTTTCCGTATTTAAAAGATTTTTACAGCTATCTGCTTCACTA
Unaligned ( gi|20 ): TTGGTTTAGAAAAGCTTTGGATTCAGTTCGGTCAGAGTAAAAATGTTGAGTGGATACCTGTTCATGTTATGTTAGTAGCAGGGTGAGCCGAGAAGA
Unaligned ( gi|21 ): CATAAATCAGGTCGATACTTCTCAGCAATGGATCACCAA
Alignments
lowQualScore : 1 1 11 1 1 22222 1 1 1 1 1 1 1 1 1 11 1 11 1 222222222 2222 1 111 55555555 11 1 1111 1111 1111 11111 22222222 111 1 11 11 111 222222 11 111 111 1111 111 11 222222222222 111111 1 1 1 1 111111 1 11 1 2222222222 111 111 33333333333333333333333333333 222222222 11
lowQualScore : 3 77777777 0 8 0 8 11 0 0 0 8 0 55555 0 1 0 2 2 0 66 2 0 3 0 0 3 0 0 0 8 1 8 3 2 0 88 55 0 3 55 2 3 1 3 2 0 2 999999999 3 7777 0 000 66 3 33333333 88 3 8 3 8 8 3 6 99 3333 1 2 2 4 3 99 4444 99 99 5 8 5 0 3 4444 11111 0 5 99999999 44 8 8 8 444 0 0 8 66 99 444 333333 44 444 1 8 444 11 8 5 5 7777 8 8 1 0 0 0 1 6 111 00 2 5 7 1 6 888888888888 999999 6 3 1 1 0 8 0 0 0 2 0 3 0 666666 6 777 99 6 6 9 3 6 2 6 11 55 1 77 3 5 5 1 77 5 2222222222 000 222 0 11111111111111111111111111111 5 5 5 777777777 6 6 99 6 888 6 6 1 6 1 2 6 00 1
lowQualScore : . ........ . . . . .. . . . . . ..... . . . . . . .. . . . . . . . . . . . . . . . .. .. . . .. . . . . . . . ......... . .... . ... .. . ........ .. . . . . . . . .. .... . . . . . .. .... .. .. . . . . . .... ..... . . ........ .. . . . ... . . . .. .. ... ...... .. ... . . ... .. . . . .... . . . . . . . . ... .. . . . . . ............ ...... . . . . . . . . . . . . . ...... . ... .. . . . . . . . .. .. . .. . . . . .. . .......... ... ... . ............................. . . . ......... . . .. . ... . . . . . . . .. .
lowQualScore : 3 00000000 0 0 6 0 00 6 8 6 0 8 00000 0 0 0 0 5 0 88 5 0 2 0 0 2 0 0 0 0 4 0 2 5 2 00 00 0 2 22 5 2 0 2 5 0 5 000000000 2 8888 0 000 55 2 00000000 33 3 0 2 0 0 2 7 22 5555 0 0 5 2 2 22 2222 22 22 2 0 6 8 2 2222 88888 8 0 00000000 88 0 0 0 000 0 8 0 22 00 000 000000 22 000 4 2 222 66 0 0 0 0000 0 0 0 8 8 8 0 7 777 00 5 7 8 7 7 777777777777 222222 7 2 0 0 8 0 8 0 0 0 0 2 0 222222 7 555 22 7 7 3 3 7 5 7 88 77 0 77 3 7 7 4 11 7 7777777777 000 111 4 77777777777777777777777777777 7 7 7 888888888 7 7 22 7 777 7 7 7 7 7 5 7 22 7
consensus : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCTCTTCTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAA--------ACCTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCNAGTACC-CACCAGCAAGTAGATG--ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-C---CATACGAGGCTATCCCTCCTACTCGAGCAG-C------TC----TAC------T-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
Reference ( family-4106 ) : GCTTTTTCCGA-AGGAACTGT-CCTCTTTATCTCATGCCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCNTGACG-TAGAACCGGAGGCTGACACCATCATCATTG-ATGGTTCGGCACTAGTGAAT-AGTCTGCCACCAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGTTTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTCTGGAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGACAGAGAAGGGCAAAGTTCNCTCAAACTGGCGGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--A--GTTGTTCAA-TT-CCTGGCTGAC-AAGATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACCAAAAAAAGAAGATGCT------TGTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCTTTCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTCGGCCAAGGNCAGAACGCGAGATGGATTCCAGTACATGACCCGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCTCTTCTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAA--------ACCTGGGATGTNTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGCAAGTAGATG--ATGA---CC------TCGAGACCTTGGAGAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-C---CATACGAGGCTATTCCTCCTACTCGAGCAG-C------TC----TAC------T-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCGGAA-ACACAAA-TCCCACCGA-C----TG-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-CCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGGACGAT-GCA-AATGCTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-GATGC--------GAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T-ACAGTGTACATACAC
gi|1 : GCTTTTTCCGA-AAGAACTGT-CCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GAG-CTGAA-GCTAGGTCAAAGCAAGGACATGGAG----ACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAG--ACAGTTGTTCAA-TTTCCTGGCTGAC-AAGATTGTA--GATGGCTGCATCAAAGATGGTCAT-GTGACCAAAAAAAGAAGATGCT-------GTGAGCAACCATACC--ATCAACCTG-GCTGAGGTGGCTCCTTGTAGCCACGGAGAAGCTGACATCCGGATCTTTCTGCA-TGCCAAACATGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-AGAGATTGGTCTGC-AGCAGCTGTGGATTGCCTTAGGCCAAGGACAGAACACGAGATGGATTACAGTACATGACCTGTGCCTCTCCCTTGCA--CTG----GAGAA--GA--CCAGA-GGAATTCTCT-CTTCCATGCCTTCAC----TAGCTGCAATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTAGCAA--------ACCTGGGATGTGTGTG-AGGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGC-AGTACC-CACCAGCAAGTAGATG--ATGA---CC------TCAAGACCTTGGAGAAGT---TTGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTT-GCTCG--AAGCAGAGA-C---CAT----------TCCTCCTACTCGAGCAG-T------TC----TAC------T-GCAGCATGTGAAGCGTGCTGCCTACCAGGCTGG-CTGCATGTGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAA-TCCCACCGA-C----TA-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAGCT-GCA-CCTATTGCA-GAGAGC-TGTCAGCAACTCACCAAGTGTGGATG-CAA-GT-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-T-ACAGTGTACATACAC
gi|10 : CACCAA-C----TGCGGGCTG-AC-C-A-G--AAA---TGA-CTGT-GGCAGATCTTATGGACTGA-CT-CCA--CTAT--CA-GAGAGTATGTCAG-AACTCACCAA----GGATG-CAATGTACAGA-ATGCCGCTGACGAGAGCA-AATGCTA----C--CTTGTT---T---------ACCT---------GTA----------CTTACTCGCACGT-A-GATGC--------GAC-ATTATAG--ACTAA-GAGTTCAT-ACCTCACCTATTT-CACACCGACTGTCAAAACATAAAAAAGTCGAACT--TCTGTCTTACTGACT-TCA-TGT-CATATAC
gi|13 : aTGCTTGGAAGGAAGCAA-CGTTCATTTGATGTTATCCCACCTACAAAAGCAT-CATTGATTCAGCATACCAAGCAT-GCAGCAT-----ACATG-----TATCAAGCTGG-TTGTATATGGGCTCAGatactacaataaatctgaattgttgtgtcccattggtttttgttcattttttgctaaaacgtagtaccaaagaaggccctaaaccgaattcaaagccataaatttcacttcaccatggtcaaaaacatattgatttgacaccaaaaatcattcaaatcggttccaagatccacgttcttggcaaaataatgtgtttcctatgacagaaatgcgccacttgaaaaagcggccattttgaaaattcaagtggctaatgcggtttttttcaataagtttccaagtaaggacattatagcaaattttggttgcttgtttccggcgatttgaacgatttacaagtatctgcttcacta
gi|15 : ttctgatgttatgaatgtgtttcaaaaatcaagtatacagtgtatatcctcctgtactggatgaccattatattgatatcgtccagatatatgttgtcattgttgtgtctctgtatgattggtcttcaaatgttgaagccatattcaataCTGAGTTGGCTCCTTGTAGCCATGAAGAAGCTGACACCCGGATCGTGCTGCA-TGCCAAGCACGCAGCAGAAGAAG-GCAGC-AAAGTATTCATGGTCAAAGTCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGCTTTGTCTGC-AGCAGCTGTGGATTGCCTT------AGGACAACACACGAGATGGATTCCAGTACATGCCCTGTGCCTCTCCCTTGCA--ATG----GAGAA--GA--CCacatgtttaatggaaaaaataagtttttc
gi|16 : T-CAGA-GTGCCGTGGACGAT-GCA-AATACTA----A--C--GTT---TT-G-GTCCGACCT---------GTA----------C--A---GC-TGT-A-AATGC--------AAC-A-TGTAG--ACTAA-GAGTTC-T-ACCTCACCTATCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAACTTGTCTATTGTACTGG-TAACAGTGTACATACAC
gi|2 : CCATGTAGAAGCTGACACCCGGATTTTTCTGCA-TGCCAAGCACACAGCAGAAAAAG-GCAGC-AAAGTACTCATGTTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCATCCA-TGATATTGGTCTGC-AGCAGCTGTGGATCGCCTTTGACCAAGGTCAGAACACGAGATGGATTCTAGTACATGACCCGTGTCTCTCCCTTGCA--CTG----AAGAA--GA--CCAGA-GGAATTCTCTTCTTCCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAGCATTCCGTGGGAAAGGGAAGAAGTCGGCGTGGCAA--------ACCTGGGATGCGTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGCCAGTACC-CACCAGC-AGTAGATG--ATGATGCCC------TCAAGACTTTGGAAAAGT---TCGTGGTCAT--GATGTACGACAGGTCCAGTACA-GCTGATGGT----GTT-GAT-GATGCCAGGATGGACATGTTTGCTCGGAAAGCAGAGA-C---CATACGAGGCTATTCCTCCTACTCGAGCAG-C------TC----TAC------T-GCAGCATGTGAAGCATGCTGCCTACCAGGCTGG-CTGCATATGGAGTCAGTCGATGG-TA-TGTCAACCAGAA-ACACAAAGTCCCACCGA-CTGCATG-GGGCTGGAC-CAAAA--AAAGG-CGATCTGT-GGCAGATCTTCTGGACTGAACTGCCA-CCTATTGCA-GAGAGC-TGTCAACAACTCAACAAGTGTGGATG-CAA-GT-CAGA-ATGCCGTGAACGAT-GCA-AATGCTATGGTAACC--GTT---TT-G-GTCTGACCT---------GTACTGGACTGTGC--A---GC-TGT-A-GATGCGGAATGTAGAC-A-TGTAG--ACTAA-GAATTC-T-ACCTCACCTATCTGCACA-CGA-TGTCGAAACATGAAACAGT-GAACTTGTCTGTTGTACTGG-T---AGTGTGCATACAC
gi|22 : gaccaatagagtggatgttgaggcacaaccagggcacactggtgacaccaC----TGGCTGCGATG--C--TGTCTCAGCATTCCGTGGGtatacgtaataaatcttgtaactgttgtgttcaatgtgtattttgttcattttttgctaaaaggtggtacaaagaagccctaaaacgaattcaaagctataaatttcactttcccatggtcaaaaacatgaattgacaccaaatcatgccaaatcggtccagttcttggtttcctatgccagataatggggcatcttgaaaaatagcggccatattgaaattcaagtggctatatgggtttcttatagcaagttgtccaaggacattatgcaaatttgtgtgcttgtttcctgatgtgataagattttttgcagctatctgcatgcttcactac
gi|3 : AAAAGAAGATGCTCTATTATGTGAGCAACCATGCCCTATTAACCTGCGCTGAGGTGGCTCCTTGTAGACATGAAGAA--CGA-ACCCGGATCTTCTTGCATTGCCAAGCA-GCCACAGAAGAAGAGCAGCAAAAATACTCATGGT-AAAG-CAGCGACA-AAATGTTCTGGTCTCAGCAGTGAGT-TTCTGCCAACCCTCCATTGAGATTGTTCTG--AGCAGCTGTTGATTGTCTT
gi|3 : gTGCCTCTCCCTTGTA--CTG----GAGAATGGA--C-AGACGGAATTCTCTGCCTCC--GCCTT-ACAGGATGGCT-CGATG--TGCTGTCTCAGCATTCCGTGGGAAGGG----AAGTCG-TGTGGCAA--------ACCTGGGATG-ATGTGTACGAGGCTGTCTGATGT-ATTCAGCAAACTTTCAAGCGAG-ACCGCACCAGCA-GTAGATGTGATGA---CC------TCAAGAC-TTGGAGAA-----TCATGCTCAT--GATGTACGACAGTTCCAG-ACATGCTGATGGT----GTT-GATTGATGCCAGGA-GTACATGTTTGCTCGAAGAGCAGAGA-C---CATACGAGGC-ATCCC--CTACTCG-GCAGGC------TC----TAC------T-ACAGCATGTGAAGCGTGCTGCC-ACCAGGCCGGCCTGCATA-GGAGTCAGTCGATGGATATTTTCAACCAGAA-ACAC-AA-TGCCACCGA-T----CT-GGGCTGGAC-C-AAG--AAAGG-CGATCTGT-GGCAGATCTTCTGGACGGA-CT-CCA-CCTATT-CA-GAGAGC-TGTCAGCAACTCACC-AGTGTAGA-G--AA-GT-CAGA-ATGCCGTGAACGA--GCA-AATGCTA----C--C--GTT---TT---GTCTGACCT----------TA----------C--A---GC-TGTGA-GATGC---------AC-A-TGTAG--ACTGA-GAGTTC-TAAACTCACCTTTCTGCACA-CGA-TGTC-AAATATGAAACAGT-GAACTTG-CTGTT-TACTGG-T-ACAG-GTACATACACgcctctcccttgtactggagaatggacagacggaattctctgcctccgccttacaggatggctcgatgtgctgtctcagcattccgtgggaagggaagtcgtgtggcaaacctgggatgatgtgtacgaggctgtctgatgtattcagcaaactttcaagcgagaccgcaccagcagtagatgtgatgacctcaagacttggagaatcatgctcatgatgtacgacagttccagacatgctgatggtgttgattgatgccaggagtacatgtttgctcgaagagcagagaccatacgaggcatcccctactcggcaggctctactacagcatgtgaagcgtgctgccaccaggccggcctgcataggagtcagtcgatggatattttcaaccagaaacacaatgccaccgatctgggctggaccaagaaaggcgatctgtggcagatcttctggacggactccacctattcagagagctgtcagcaactcaccagtgtagagaagtcagaatgccgtgaacgagcaaatgctaccgttttgtctgaccttacagctgtgagatgcacatgtagactgagagttctaaactcacctttctgcacacgatgtcaaatatgaaacagtgaacttgctgtttactggtacaggtacatacactatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : gaaaagaagatgctctattatgtgagcaaccatgccctattaacctgcgctgaggtggctccttgtagacatgaagaacgaacccggatcttcttgcattgccaagcagccacagaagaagagcagcaaaaatactcatggtaaagcagcgacaaaatgttctggtctcagcagtgagtttctgccaaccctccattgagattgttctgagcagctgttgattgtctGCTCTTCTCGA-AGA---------TCTTTATCTCATGCCAGAG-CCGAGAATACGACCTCACTGCC-TTCTTTCAGCA--TGAGAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCACTCCTGTCAGAAA-TCCCAGCTTACTACCATGCTT-----GAGACCCATGTTACCATCCCTGACG-TAGAACCAGAGGCTGACACCATCATCATTG-ATGGTTCGACACCAGTGAAT-AGTCTGCCACCAAGG-CCCTCGAAGAC-CTTTGAGGAATATGGAGTAC-TTGATGTGCTTCCAA-CCATGCA-AGGTTGTTTGACCAAGTACAACA-GGACGGACCTCGTGTTTGATGTCTATCAGCCATCGAGTCTGAAGGCTGAA-GCTAGGTCAAAGCGAGGACGTGGAGCCAGACGCAGGGTGAAAGAGAAGGGCAAAGTTCCCTCAATCTGGCGGAACTTCCTCCGA-GGCAATGACAA-AAAAC--CG--A--GTTGT----------TGGCTGAC-AATATTGCACAGATGGCTGCACCAAAGATGGTCATTGTGACC----AAAGAAGATGC-------TGTGAGCAACCATACC--ATCAATTTG-GCTGAGGTGACTCCTTGTAGCCATGAAGAAGCTGACACTCGGATCTTTCTGCA-TGT----CACGCAGCAGAAGAAG-GCAGC-AAAGTACTCATGGTCAAAGCCAGCGACACAGATGTTCTGGTCATAGCAGTGAGTGTTCTGCCAACCCTCCA-TGAGATTGGTCTGC-AGTAGCTGTGGACTGtatacgtaataaatttcgtattgttgtggtccaatgtgatattttgttcaatttttgcgcaaaaaaagtggtacaaagagcccttaaacgaacttaagctatacatttcacttctccatggtcaaaaacatatgatttgaaccaaaatcatccaaaatcggtccagggaatccagttctgtgcaaaaattgtttccatgccagaaatagcggccatcttgaaaaaagcggccattaaattaaaaattcaaagggtaatgtttttctctaagtaaattgtccaagaaggacattcattcaaatttggtggctttgtttaccggattgaaagatttttacagctatctgcttcacta
gi|4 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccaTGGA--CTG----GAGAA--TA--CAAGA-GAAATTCTCTTCTTTCATGCCTTCAC----TGGCTGCGATG--T--TGTCTCAACATTCCGTGGG-AAGGGAAGAAGTCGGTGTGGCAAACTTGCACACCTGGGATGTCTGTG-ACGAGGCT-TCTGATGT-CTTCAGCAAACTC---AGTCAGTACC-CACCAGC-AGTA---G--ATGA---CC------TTGAGAC--------AGT---CAATGATCATCGAATATACGACAGGTCCAGTACA-GCT-AT-GT----GTTAGAT-GAAG-CAGAATGGACA-G-TTGCTCGGAAGGCAGAGACC---CATATGAGGCCATTCCTCCTACTCAGACAG-C------TCCA--TAC------TGGCAGCgagaatacaagagaaattctcttctttcatgccttcactggctgcgatgttgtctcaacattccgtgggaagggaagaagtcggtgtggcaaacttgcacacctgggatgtctgtgacgaggcttctgatgtcttcagcaaactcagtcagtacccaccagcagtagatgaccttgagacagtcaatgatcatcgaatatacgacaggtccagtacagctatgtgttagatgaagcagaatggacagttgctcggaaggcagagacccatatgaggccattcctcctactcagacagctccatactggcagc
gi|5 : tcagaccaagcaccgtccacagttggtgcatcaaaggaaaaggtgctgaaggaggattgccagctcttctcgaagatctttatctcatgccagagccgagaatacgacctcactgccttctttcagcatgagaaccaggcattccctgctgccctgagtgatggtggaaagcttcactcctgtcagaaatcccagcttactaccatgcttgagacccatgttaccatccctgacgtagaaccagaggctgacaccatcatcattgatggttcgacaccagtgaatagtctgccaccaaggccctcgaagacctttgaggaatatggagtacttgatgtgcttccaaccatgcaaggttgtttgaccaagtacaacaggacggacctcgtgtttgatgtctatcagccatcgagtctgaaggctgaagctaggtcaaagcgaggacgtggagccagacgcagggtgaaagagaagggcaaagttccctcaatctggcggaacttcctccgaggcaatgacaaaaaaccgagttgttggctgacaatattgcacagatggctgcaccaaagatggtcattgtgaccaaagaagatgctgtgagcaaccataccatcaatttggctgaggtgactccttgtagccatgaagaagctgacactcggatctttctgcatgtcacgcagcagaagaaggcagcaaagtactcatggtcaaagccagcgacacagatgttctggtcatagcagtgagtgttctgccaaccctccatgagattggtctgcagtagctgCTTTTTCCGACAGGAACTGTGCCTC
gi|5 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataaCTCTTTATCTCATGCAGAAGACCTAGACTGTTGAATCCCTGCCATTCTTTCAGCAGATGAGAACCAGGCATTCCGGGCTGCCCTTAGTGA-GTTGGAAAGCT-CACTCCTGCCAGAAAATCCCAGCTTAC-ACTTTCCTTTATTAGAGACCATTTT-ACCATCCCTGACGATAGAACTGAAGG-TGACACCATCATCATGGGATGGTC--ACACTA-TGAATGAGTC-GCCACCAAGGTACCTCGAAGAAACTTTAGCGAATATGCAG-ACATTGATGTTTT-CCGAGCCATACAGAGGTTATTTGACCAAGTACAAAAAGGACGGAAA-CGTGTTTGAT--CGATCAGCCATCGAGTCTGGAGGCTGAAAGCTAGGTCAAAGCGAGGACGTGGAGTCAGACGCA--GTTACAG-GAAGTGCAAAATTCCCTCAAAC-G--GGAACTTCCTCCGAGGACAATGACAACAAACC---G--A--GTTGTTCAA-CTGCCTGGCTGCCAAAGATTGCACAGATGGCTGCACTAAAGATGGTCATTGTGACCAAAGAagttggtgcaatcaagggaaaaggtgctgaaggaggactgccagcttcttcaagctctttatctcatgcagaagacctagactgttgaatccctgccattctttcagcagatgagaaccaggcattccgggctgcccttagtgagttggaaagctcactcctgccagaaaatcccagcttacactttcctttattagagaccattttaccatccctgacgatagaactgaaggtgacaccatcatcatgggatggtcacactatgaatgagtcgccaccaaggtacctcgaagaaactttagcgaatatgcagacattgatgttttccgagccatacagaggttatttgaccaagtacaaaaaggacggaaacgtgtttgatcgatcagccatcgagtctggaggctgaaagctaggtcaaagcgaggacgtggagtcagacgcagttacaggaagtgcaaaattccctcaaacgggaacttcctccgaggacaatgacaacaaaccgagttgttcaactgcctggctgccaaagattgcacagatggctgcactaaagatggtcattgtgaccaaaga
gi|6 : acactcaaataggtcgatagcttctcagtcaatgccacgaaccaatgctcatgagcaggccaatgctgtcatcagctgatggggagaatcgtgttgacttgaagatcatcagcacatgagagatggatggtagtgctgagtcagaacttgattgatataatgagcgcagctaatacaaagagcacctgaacattaccagccatcattgagcaacagaactaagtccacggattgtgtttactgtgagaattgttctggccactcctccaaaccattgacagatatggcatcctattccaagaagcaagccgaactactggttcattggacaaaagacatgccacacaatgcagcttgaactgttggcaccatccacagagaaaggcaggttcttttccagcgtttgcattgggactagaggtgggagaatgcaccttctaatgacctaacaaacaagcagatacaggataactttttccgacaggaactgtgcctcagttggtgcaatcaagggaaaaggtgctgaaggaggactgccagcttcttcaagGCTTTTTCCGA-AAGAACTGT-CCTCTTTATCTCAT-CCAGAG-CCGAGAATGTTACCTCACTGCC-TTCTTTCAGCA--TGACAACCAGGCATTCCCTGCTGCCCTGAGTGATGGTGGAAAGCTTCAC-CCTGTCGGAAA-TCCCAGCTTACTACCATTCTT-----GAGACCCATGT-ACCATCCATGACG-TAGAACCAGAGACTGACACCATCATCATTG-ATGGTTCAGCACTAGTGAAT-AGTCTGCCACTAAGG-ACCTCGAAGAC-CTTTGAGGAATATGCAGTAC-TTGATGTTCT-CCAA-CCATACA-AGGTTGATTGACCGAGTACAACA-GGACGGACATCGTGTTTGATGTCCATCAGCCATCGAGTC--GA-GCTGAA-GCTAGGTCAAAGCAAGGACATGG----AGACGCAGGGTGACAGAGAAGGGCAAAGTTCACTCAAACTGGCAGAACTTCCTCCGA-GACAATGACAACAAAACGGAGACA--GTTGTTCAATTT-CCTGGCTGAC-AAGATTG--TAGATGGCTGCATCAAAGATGGTCA-TGTGACCAAAAA
gi|7 : atgatgacctgggaacagaagcactcccagctggctcaggagttccagagagggaaatttgtagtacacaaaacaggttgatacttctcagcaaatggccatcgaccaagctcatgagcaggtcaatgctgtctcaaggctgatgggaagcaatcagtgtgactgaagatccatcagcactgaggaagaggatggtagctggtccgaagtcagccacttggttgaacagtatgaggcagcagctggaaccaaagagcacactgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaagctcccccaaaccatgacagatatgggcaatccattccaagaagcaagccgagactgttttcattggacacaaggacattgcccaccacactgcagctgaactttttggcacacaccacgagaaaggaagggtgcgattccagcagttcatgcatggactagaggtgagagaaccaccttctatgacccaatcaagaagaaccaggtaaCTTTTTCCGACAGGAACCGT-CCTC
gi|7 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaaGCTCTTTGCGA-AG---------CTCTATATCTCATGCCAGAA-CCGAGAATGTGACCTCACTG----------------TGAGAACCAAACATTCCCTGCTACCCTGAGTGA-------AAGCTTCAATCCTGTCGGAAA-TCCCAGCTTACTACCATTCggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|7 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccaCA-AGGTTGTTTGACCAAGTACAACA-GGACGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaaggttgtttgaccaagtacaacaggacg
gi|8 : atccacctccgagacatgatgaccttggaacagaagcactcccagctggctcaggatttccagagagggaaatttgttgtacacaaatcaggtggatacttctcagcaatggccatcgaccaagctcatgatcaggccaatgctgccatgaaggctggtgtgtagcaatcagtgtgactgaagatccatccgcactgatgagatgggtggaagctggtcgtgaagacagccactcgtatgaagagtatggggcagcagctggaaccaaagaacaccctgaacataccagccatcatgagcagacagaacaagcccaacggatgttccttgagaaggttggcaaactctcccaaaccatgacagatattggcaatccattccaagaagcaagccgagacctattttcattgcacacaaagggcattgcccaccacactgcagctgaacttgttggcacataccacgagaaaggcagggtgcgattcaagcagttcatgcatggactagagttgagagaatccaccttctatgacccaatcaagaagaaccaggtaaactttttccgacaggaaccgtcctcggttggtgcatcaaagtaaaaggtgctgaaggaggactgccagctctttgcgaagctctatatctcatgccagaaccgagaatgtgacctcactgtgagaaccaaacattccctgctaccctgagtgaaagcttcaatcctgtcggaaatcccagcttactaccattcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntATACAGATGTTTTCGTGATTGCTGTAAACGTTTT---------CCA-T-----TGG-CTGAGAGAAGCTTTGGCTTGAGTTCAGTCAGGGTAAAAATGTTAGATCGATTCCTGTTCATGA----TG----TTAGTAGCAGGTTGAGCCGAGAA--GAGTCTGCT-GGTATTTTATTTTTTCATGCCTTTTC----TGGTTGTGATAACT--TGTC--AGGTTTCAAAGGCAAAGGGGAAAAGTCTTTATGGCAA--------A-------TATTTGTC-CTGATGCT-ACTAATGTGTTTCAAAAAATTG---AGTATATATT-CCCCGGTAC-TGGATGG-ATTA---CCATGCTATTGATATCATCCAGATGTATGTTGTG-TCTT----TGTATGATAGGCCTAGT-----CTTGTCGCAAAAGTT-GAT-GAGGCCAGATTCGACATGTTTGCAAGGAAA-CAACGT-T---CATTTGATGTTATCCCACCCACAAAAGCAT-C------CT----TGA------T-TCAGCATACTTAGCGTGCAGCATATCAAGCTGG-TTGTATATGGGCTCAGACATTGG-CA-TGTTTAATGGAAGAAATAAG-TCCCTCTGA-T----TA-GGGTTGG-----AAGCTAAAGGTTAATGTATAGACAG-TTGTATGGTCTGAGCT-TCATCCGATTGCT-GAGTCA-TGCAAGCAGCTTCCAAAATGTGGATG-TAA-GC-AAGA-ATGTCGGTGCCGAT-GTA-AGTGCT------------TTGAGTT-GAGTTTGCCGT---------GTA----------C--T---GC-TCT-A-TAT
gi|9 : CACCGATC----TG-G--CTGGACAC-CAG--AAAGG-CGATCTGT-GGCAGATTCTCTGGACTGAGCTTCCA-CCTATTGCAAGAGAG--TGTCAGCAACTCAC--AGTGTGGATGTCAATGT-CAGACATG---TGG-CGAT-GCAGAATGCTA----A--C--CTT---TTTG-GTACGACCTTACTGGACTGTG----------C--A---GC-TGT-AAGATGC--------GACCA-AGTAAGAACTAAAGAGTTT-A-ACCTCACCTGTCTGCACA-CGA-TGTCAAAACATGAAACAGT-GAAATTGCCTATTGTACTGG-T-ACAGTGTACATATACagttgtcaatgt
8 sequences could not be aligned to this reference sequence:
Unaligned ( gi|11 ): ACATAATAAATCTTGTAATTGTGTATTTTTTTTCAATTTATGCTAAAAAGTGGTACAAAGAAGCCCTAACATGAATTCAAAGCTATAAATTTCACATCCCCAAGGTCAAAAACATATGATGACACCAAAATCATCCAAATCGGTTTAGAGAATCCAGTTCTGTGGCAAAATATGTGTTTCTTATGCCAGAAATGACGGCCATCTTGAAAAATAGTGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATTTTGGTGCTTGTTTCCGGATTTGAAGATTTTTACAGTTATCTGCTTCACTA
Unaligned ( gi|12 ): ACCTTGATATTTTTTAATTATATCGCTACAATTATCATACAAGGAAGCTTCTAAGTAATTCCAGAGTTCCAAATTCAGCTTCTATATGGTCAGAAATGTGTGATTTGACACCAAAATCAATACTGTAGGACAAATATTTACAATTTTATTGCAAAGAATGATTTTTCATAGCAGAAATGGCGGCCATATTGAAAAAAAGCCACCATCTTGAATTTGTCAGTGGCTTATGCTTTTTTTTCAAAAGTGTAGCTCCCAAGGAGTATTTGTGCTAATTTTGGTGCTTGTTTCCAGATTTGAAAGATTTCTGTGAAATATTCAGTTATCTGCTGCACTA
Unaligned ( gi|14 ): AGCTATAAATTTTACTTCCCCATGGTCAACAGCATATGGTTTGACACCAAAATCATCCAAATCGGTCCAGAGAATTCAGTTCTGTGGCAAAATATGTGTTTCCTATGCCAGAAATGGCGGCCATCTTGAAAAATAGCGGCCATTTTGAAAATTCAAGTGGCTAATGGGTTTTCTCTAATAAGTTGTCCAAGAAGGACATTCATGCAAATGTTGGTGATTGTTTCCGGATTTGAAAGATCTTTACAATTATCTGCTTCACTA
Unaligned ( gi|17 ): CGTGCTGGCAACATGGATTTCAGTTGACTTAAACCTTGATTTTTTAATTATATCGCTACAATTATGGTACAAGGAAGCTTCTAAGTAATTTCAGAGTTCCAAATACAGCTTCTGCATGGTCAGAAATGTATGATTTGACACCA
Unaligned ( gi|18 ): CATCCACCTCCGAGACATGATGACTCTGGAACAGAAGCACCCCCAGCTGGCTCAGGAGTTCCAGAGAGGGAAATGTGTTGTACACAAATCAGGTCAATACTTCTCAGCAATGGATCACCGA
Unaligned ( gi|19 ): GCTAATGGGTTTTCTCTAATAAGTTGTCCATGAAGGACATTCATTCAAATTTCGGTGCTTGTTTCCGTATTTAAAAGATTTTTACAGCTATCTGCTTCACTA
Unaligned ( gi|20 ): TTGGTTTAGAAAAGCTTTGGATTCAGTTCGGTCAGAGTAAAAATGTTGAGTGGATACCTGTTCATGTTATGTTAGTAGCAGGGTGAGCCGAGAAGA
Unaligned ( gi|21 ): CATAAATCAGGTCGATACTTCTCAGCAATGGATCACCAA