lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111 222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 4 4 4 4 6666666666666 4 33 55555 4 888888888888888 444444 666 1 4 444444 1 6666666666666666 2 4 33 55555 22 22222 4 22 333 1 1 2 222 4 4 11 666 444 22 1 333333 2 1 2 55 333 4 11111111 1 444444 2 333333333333333 1 1111 55555555555 11 11 1 1 1 1 3 1 1 11 11 333333 33 1 11 33 1 22222 66666666666 1 2 111 1 44444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11 4444 11 22222 3333333 11 111 1 1111 111 111111 11111111 2 1111111 444444444444444444444444444444 333333 1 33333333333333333333333333333333333333333333333 1 333333333333 2 111 11 1 3333333 11 1 3333 22222222 222 1 22222 1 111 99999999999999999999999 222 1111 222 1111 11 2 11 1111111111 11 11 11 33 11 111111111 111 4444 111 1 333 111 3333 111 4 11 222222222222222222222222222222222222222222222222222222222222222222222222222 4444444444444444 3333 2222 33333333333 11111111 1 111 11 2222 11 77777777777 11 33333333333 444444444444444 1 333 111 1 111111 2 555 11
lowQualScore : 0 0 0 0 4444444444444 0 6 22 44444 0 000000000000000 333333 111 5 0 222222 5 4444444444444444 0 0 11 11111 44 33333 0 77 2 333 5 5 3 000 0 0 77 222 666 77 5 111111 6 7 3 6 55 6 111 0 99999999 3 000000 6 3 7 999999999999999 3 3333 22222222222 88 7 88 3 4 3 7 2 1 3 0 1 3 3 88 6 6 88 666666 77 66 7 2 88 2 33 3 0 6 55555 2 55555555555 7 4 0 0 1 0 88 8 8 4 222 2 0 66666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 2 2 77 8888 2 11 444 66666 9999999 8 8 99 77 111 2 2 1 5 7 2222 666 5 222222 0 77777777 9 6 9 1 4 2222222 6 444444444444444444444444444444 6 66 66 333333 8 6 8 1 2 8 11111111111111111111111111111111111111111111111 7 1 3 666666666666 1 3 6 6 666 11 6 3 7777777 88 3 11 5555 6 7 7 99999999 7 333 7 3 33333 4 0 66 4 2 9 777 4 55 4 66666666666666666666666 5 666 0 6 7777 333 0 5555 6 11 8 5 6 11 8 9999999999 1 11 6 22 5 11 55 6 11 333333333 8 000 0 0 1 7 3 2 6 2222 000 8 2 77 0 333 999 0 0000 8 444 0 0 99 44 7 11 000000000000000000000000000000000000000000000000000000000000000000000000000 3 4444444444444444 99 99 2 66 77 66 5 5 0 33 77 5 5 3333 2 4444 2 99 0 5 0 2 0 66 0 1 2 77777777777 99999999 2 0 7 5 77 33 7 2 0 777 3 99 6 222 11 6666 6 8 11 55555555555 44 11 0 5 6 00000000000 1 888888888888888 5 0 0 2 999 000 55 9 0 999999 5 5 0 5 2 3 2 1 3 5 8888 8 0 8 000 11 8 6 88 0 3 3
lowQualScore : . . . . ............. . . .. ..... . ............... ...... ... . . ...... . ................ . . .. ..... .. ..... . .. . ... . . . ... . . .. ... ... .. . ...... . . . . .. . ... . ........ . ...... . . . ............... . .... ........... .. . .. . . . . . . . . . . . .. . . .. ...... .. .. . . .. . .. . . . ..... . ........... . . . . . . .. . . . ... . . ................................................................................................................. . . .. .... . .. ... ..... ....... . . .. .. ... . . . . . .... ... . ...... . ........ . . . . . ....... . .............................. . .. .. ...... . . . . . . ............................................... . . . ............ . . . . ... .. . . ....... .. . .. .... . . . ........ . ... . . ..... . . .. . . . ... . .. . ....................... . ... . . .... ... . .... . .. . . . .. . .......... . .. . .. . .. .. . .. ......... . ... . . . . . . . .... ... . . .. . ... ... . .... . ... . . .. .. . .. ........................................................................... . ................ .. .. . .. .. .. . . . .. .. . . .... . .... . .. . . . . . .. . . . ........... ........ . . . . .. .. . . . ... . .. . ... .. .... . . .. ........... .. .. . . . ........... . ............... . . . . ... ... .. . . ...... . . . . . . . . . . .... . . . ... .. . . .. . . .
lowQualScore : 0 0 0 0 0000000000000 0 0 00 00000 0 000000000000000 000000 000 0 0 000000 5 0000000000000000 0 0 55 00000 00 00000 0 55 5 555 5 0 0 000 0 0 55 555 000 55 0 777777 7 3 3 7 00 7 000 0 00000000 3 000000 7 7 3 333333333333333 3 7777 00000000000 33 3 33 3 0 3 3 3 0 3 7 7 3 3 33 7 7 33 000000 33 77 3 3 33 5 22 2 0 0 00000 5 22222222222 8 0 0 0 4 6 66 0 0 2 000 0 8 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 2 00 8888 2 22 000 22222 2222222 0 0 22 33 333 5 5 2 7 0 1111 777 7 666666 7 77777777 2 0 0 0 2 2222222 7 555555555555555555555555555555 7 22 33 999999 0 0 0 4 2 0 88888888888888888888888888888888888888888888888 3 0 3 333333333333 0 3 7 7 000 00 7 3 7777777 33 3 77 7777 7 3 3 33333333 3 333 3 3 77777 0 0 55 0 5 2 888 0 55 0 88888888888888888888888 4 000 6 2 2222 666 6 6666 6 00 0 8 6 00 0 8888888888 0 88 2 44 0 88 00 2 00 000000000 0 000 8 8 8 4 2 2 4 6666 000 3 0 33 7 777 000 7 0000 3 333 7 0 00 00 0 77 777777777777777777777777777777777777777777777777777777777777777777777777777 2 2222222222222222 22 22 5 33 99 00 7 7 1 11 99 7 7 3333 1 3333 3 77 3 7 6 1 7 44 7 9 1 77777777777 00000000 1 1 9 7 99 44 9 1 8 777 0 22 7 444 88 4444 0 0 00 22222222222 44 00 6 7 7 55555555555 6 999999999999999 0 8 5 6 111 666 55 9 8 444444 0 0 0 0 2 0 8 4 0 0 4444 0 8 0 000 00 0 0 66 8 2 2
consensus : TTCGTGAAGGGAGGGTTTC-GGTCACAGATACCGTTCCACGCCGCACAAGGCG-CGGAACCAAGGCAGGTCGGANAAGTT-TCCGGGACACACAGGGTTGTAACCGGAAAGTGTGGAAGAATGGATGCATCCTTAAACAA--ACCGGGT-TAA--TGATAATAATC-TCATATCATTGTGAGG--ACTCTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCATATATCCTACCCGAAACGGTT-CCTGATNGAGCCAACCGTGAAGCTANCCCGATACTGATGTCAACA-ACGGGCAAANAGAATTGACGAATCCAGATCGTCGAAATATGTTCAAACTTGCTNNAAATTCACATAACTGA-GGTTCCAAAGGTTTAAAACA-ACTAGGACCACAAATCACTGTGTGC-TTTGAATTGTAGATCTTC-TAGAAATAA--ATCATTGTCCATCAACGA-T-ACATCCAGTCC-AACA-CGTCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATGACA-GATAA-TT-CAT---TGC--T--CCG--AATTAAC--ACCAGATGGGTACAATTTCATT-CANAA-ACCAAGGGCTGA-CACGTAGAG-GT-GG-GG--TCTGGCGATCGTCCAC--TCAAA-C--A-TTAGCGTGAAGCC--TGCGAACAAGGA--TACCATGTACTCGCATTTTGA-ACA-CCT-AGAGTGCTCTGTTGGTGTAAAAAAAAA------CGACTTTTTTCGNCTTTGTGTTATATNTCG-CCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATNTTTCTTTGAAGAATGGGCTANNATNTTTGGACAGCC-------TTATG-GTTAT--TA--CCNGGNGAA-GT--TTA--TTACTGG-G-ATCTGAA-CTTC--ACCTAGACGACAC----GNAGGAC-AACGACGCCAGGAAGTTCCTTGAGCTGCTGGAAGA-CAGGGGA--T-TA-CGCA-GC-ATATTT-NCGANCCAAC--NCATNTCCGGG-GTC----ACAC-CCTGGAC-GTTCTG--ATAACCAG----GGATGACAGCCC-AATNTTGCGTG-G-AA--CCC-T--NTNG-T-G-TAGA-C---C-C-GG-TN-TATGCG-ACAACAANGGCAACATTNACTGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGG-AAAAA--TGTAA-CT-TTCCG-AAAGTTGACCGAAATTGACAT-CAGCAATTTNAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACACAAAGAAACG---TCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCGTCGA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTTTGCGGCCN--AACACNCNNTGGTTCACNGAC-GAT--C-TG------CATTCTGCCAAAAGAGAGCG-TCGAAGGGCNGAG---CGGATNATGAGAAGAA--CNAAACTGACT--GTCCA-CAAGGAAA--TT-TT-CAAGGAG-AAATGTACGCAGGTNAC-NAAACTC-TTGCT-ACANT--GCAAA-GNACA-NT-ATTACGCCGGCAAAATTCAAGAACTNGGNAACGACTACG-AAACAA-T-TATACAAGATCATTAATA-G-CTT--ATGGGAAAAAAAGATGATTCCGTTTTGCCGGAACAT-AACAGCGA-----CGTTG-----AACT--------------T-GCG---TCTTTTT-------AAAA----------------TTCAGAAAA----------------TT--AGAG--ATNACCTATGTC--C-TTCGA-ACA-GTTTCCCTTCTATGGAAAGTG-CTC-T-TC-GAGCNGA----CGGAAAATTCGACG-GTATTCCNCTAGAGGTG-TTTGAGCCAGTTNCAGCCT-C-G--A--G-TGAGT----G---ANATCATCAGTG-AN-GCGCCNACAAAGTCCTGCNAACTAGACCCGATNCCAACTAA-CGTNCT-NA-AGCAATGTTTGGA--NTGTGT-TTTC--ACCAATTATC-GCCGAA--ATTATAAACAGACAAATCTTTTTCAA--AATCGACGGT-GCC-A---NC---GA-TTTAAAAAAAGCT----------A-TTGTACGACCATTNATTAAGCGGACAAGGACTN--G-ACAAGGACGAATTTAAAAA------T-TA-CAGGCCTGTT-TCAAACTTACCTTTCCTATCTAAAGTATTGGAAAAAGCGGTGGCAGCTNGACT-TG-A-AAAACACGT-AAACACTTACCAGCTT-CACGAC--CA-CGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
Reference ( gi|1 ) : TTCGTGAAGG-AGGGTTTCAGGTCACAGATACCGTTCCA-GCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCAGAGAC-CA-AGGGTT-TGACCGGAATTTGTGGAA-ATTTGATGCATCCT-AAACAACTACGGGGTGTAAAATGATAATAATCATCAT-TCATTGTGAGAGCACTATTGATCACCGCGG-TCAGGGCCATCCATATCAGGCGTATTACCACATATTCTACC-GAAACGGTTTCCTGAATGAGCCAACCGTGAAGCT-TCCCGATACGAAT-TCAACACACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCCTCAAATTC-CATAATTGATGGTTCCAAAA---TAAAACACACTAGGACCAT--ATCCCTGTGTGCGTTTG-ATTGT-GATCTTC-TAG-AATAATCATCATTGTCCATCAACGA-T-ACATCC-GTCT-AACA-CATCGATCTAA-TGGTT-TT---ACTGAAAACATGGCT--AGGATCTTGATAACA-GATAA-TT-CAT---TGC--T--CTG--AATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAAGACTGA-CACGTAGGGCGT-GG-GG--TCTGGCGATTGTCCAC--TCAAAGC--A-TTAGTGTGAGGCCG-TGTGAACAAAGA--TACCAT-TACTCGCATTTTGA-ATA-C-T-AGAGTGCTCTGTTGATGTAAAAAA---------CAACTTTTTTCGACTTTGTGTTATATATCG-CC-ACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCAATTTTTCTTTGAAGAATGGGCTACC-TATCTGGACAGCC-------TTATGTGTTAT--TG--CCTGGTGAG-GTACTTA--TCACGGG-G-ATCTCAA-TTTC--ATCTAGATGATCC----GAAAAACCAGAGATGCTAGAGCGTTGACAGAACTTTTAAAAGA-TCGTGGA--T-TA-CGCA-GC-ATATTT-CTGATGCAAC--ACATCTTCATG-GTC----ATAC-CTTAGAT-GTGTTG--ATAACCAG----GGATGATAGCCCGAATATTACATG-G-AA--CTC-T--TTCG-T-G-CAGA-A---C-T-GG-TA-TATGTG-ACAACAGTGGCAACATTTG-TGG-AGA-C-ACCTTGC-AATTC---------GT---------------------CCTCCA---------CCGGAGAAG-AAAAAATTGTAAACT-TTTCGGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACACAAAAGAACA---TCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCT--AACACTCCTTGGTTTACAGA--GAT--C-T-------CATT-TGCCAAAAGAGATCG-T-GAAGGGCTGAA---CGGATTAAGAGAAGAA--CGAAACTGTCT--GTCCA-CATGGATA--TT-TT-CAAGGAG-AAATGTATGCAGGTTAC-TAAACTC-TTGC--ACATT--GTAAA-GCACA-GT-ATTACACCAACAAAATTCAGGAATTAGGCAATGACT-CGAAAACAA-T-TATTCAAGATCACGAACA-T-CTC--ATGGGGAAAACCAATGTTTCAGTCTTGCC-GTGCAT-GAAAACGA-----ACTTG-----AACT--------------T-GCA---TC------------AAAA----------------TTCAGAAAA----------------TT--AGAA--ATCATTTATGTT--C-TTCAA-ACA-GTTTCCCTTCTATGGAAAGTG-CTC-T-T--GAGCAGA----CAGAAAATTCGATG-GTATTCCATTAGAGGTG-TTTGAGCCAGTTACAGTTT-C-G--A--G-TGAGT----G---ATATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-TGTTTT-GA-AACAATGTTTGGA--GTGTGT-TTTC--ACCAACTATC-GCCGAA--ATTAT---CA-A----TTTTTTTCAG--AATCGACGGT-GCC-A---AC---GAATTTAAAAACATCT----------A-TTGTACGGCCATTAATTAAGC-T-CAAGGACTT--G-ACAAGGACGAAATTAAAAA------T-TA-CA-ACCTGTT-TCAAACTTACCTTTTCTATCTAAAATATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACAT-AAACACTTACCAGCTT-C---AC--CA-CGCGCAGTCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|3 : TTCGTGAAGGGAGGGTTTC-GGTCACAGATACCGTTCCACGCCGCACAAGGCG-CGGAACCAAGGCAGGTCGGA
gi|13 : AAGTT-TCCGGGACACACAGGGTTGTAACCGGAAAGTGTGGAAGAATGGATGCATCCTTAAACAA--ACCGGGT-TAA--TGATAATAATC-TCATATCATTGTGAGG--ACTCTTGATCAC-GCGGATCATTGCCATCCATA-CAGG-GT-TTAC-A-ATATCTTACCCGAAACGGTT-CTTGATGGAGC--AC-GTGAAGCT-ACCCGATACTGATGTCAACA-ACGG--AAACAGAATTGAC--ATCC-GAT-GTCGAAATATGTTCAAACTTGCTACAAATTCACATAACTGA-GGTT--AAAGGTTTAAAAT---CTAGGACCATAAATCACTATGTGC-TTTGAATTGT-AATC-TC-TAGAAATAA--ATCATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|3 : GCCATCCATATCAGG---ATTACCATAT---CTACC-GAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGGGCAAAGAAAATTGACGA-TCTAGATCGTCGAAATATAT-CAAACTTGCTCAAAATTCACATAATTGA-GGTTCCAAAAGT-TAAAACA-ACTAGGACCAC--ATCACTGTGTGC-TTTGAATTGTAGATCTTC-TAGAAATAA--ATCATTGTCCATCAACGATT-ACATCCAGTCCAAAAA-CATCGATCTAA-TGGTT-TTA--ACT-AAAACATGGCT--ATGATC-TGAT-ACA-AATAA-TTCCAT---TGCA-T--CTG--AATTTAC--ACCAGATGGGTACAATTTCATT-CATAA-ACC-AAGGCTGA-CACGTAGGG-GTGGG-GG--TCTGGCGATTGTCCAC--TCAAAGCAGA-TTAGTGTGAGGCC--TGTGAACAAAGA--TACCATGTACTCGCGTTTTGA-ACACC-T-AGAGTGCTATGTTGGTGTAAAAAAAAACC----CAACTTTTTTCGTCTTTGTGTTATATATCGCCC-ACCGCCGTCACAATCAAAC-AA-TCTC-CGGAATTCAA-TTTTCTT
gi|6 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtTGTGTACATTGA-ACTGTAGATTTACACGG-AATAA--AACATTGTCCATCAATGAAT-TCATCAAGTCT-AACAATGTCGACCTCA-TGGTGATG---ACAGAAA-CATGGCT--TGGTTCT-GA-GATA-GATAAATC-CAT---T-C--TAGCCG--TACTAAC--CCCAGAGGACTACATTGTCATC-CAGAA-ACCAA-GATTAA-CACGTAAAG-GT-GGTGG--TCTG-CGGTCGTCCACAGTAATACG--A-TCAGCGTGAAGCCGATACG--CCAGGACGTTTCAT--ACTCTCATTTTGA-ACA-T-TTAGAGTGTTCTGTTAGCGTCAAAAA---------TGAACATATCCGTCTCTGTGTCATTTATCG-CCCACCACCATCTAAAGCAAAC-CA-TTTT-CGGAACTCG-TGTTTTTTTGAGGAATGGGC-ACAATTTTTGGACAGCC-------TT----GTTATAACA--CCAGGGGAA-GTTATAA--TTACTGGTG-ATCTGAACTTTC--ACATAGACAACAC----ACAGGAC-AACGACGCCAGGAAGTTCCTTGAGCTGCTGGAAGA-CAGGGGA--T-GT-CGCA-GC-ATATTT-GCGAACCAAC--GCATATCCGGG-GTC----ACAT-ACTGGAC-GTTCTC--ACAACCAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|2 : GTCCAT-AACGA-TTACATTCAGTCC-A-CA-AATCGATATAAATGGTT-TTTAAACTGAAA-CA-GGCTTGAGTAGCTGAATA-CATGATAA-TT-CATCATTGCCAT--CTGCGAAT-AACCGACCAGATGGGAAGCATTTCATTTCACAACACCAAGAGCTGATCACGTAGAGGGT-GG-GGGATCTGGCGATTGTA-AT--TCAAA-C--AGTTAGTGTAAA-CC--TGTGAACAA-GA--TAC-ATGTAC-CGCATTTTGACACA-CCT-AGA-TGCTCTGTTGATGTAAAA-----------CAACTTTTTTTCGCTTTGTGTTATAATTCG-CC-ACCGCCATCAACATCAAACCAA-TCTC-CGGA-TTCAATTTTT--TTGAA--ATGGGCTAAC-TATCTG-ACAGC--------TCATGT--TAT--TG--C-TGGTGAGAGTACTT----TACGGG-G-G-ATCAT-TTTC--ATCT-GATGATCC----GAAAA----GAGATTCTAGAGCGTTT-CAGAACTTTTAAAAGAATCGTGGA--TATA-AGCAAGC-ATATTT-CTGATGCAAA--TAATCTTCATG-GTC----ATAC--TTAGATTGTGTCG--ATAAC-AG----GGATGA-AGCCCATATGTTACATG-C-AA--TCC-T--GTTG-T-GGCAGA-C---C-TTGG-TAATATGTGCACAAACGTTGCA-CATT-A-TGG-AGA-C-ACCTTGCCGATTCCGACTTGGCGT---------------------CGTTCAAACAACTTCCCGGAGAGG-AAAA---TGTA--CTATTTCG--AAGTTGAC-GAAATTGACATACAGCAATTTAAAAAGAGAC-TG-GATTT---T---TCGAGT--TTATTCACACAAAGAAAC----TCC--TGAAAAACTTGCTGTGCGAAA-CT-CAA-A---CCGTTTTACAAAC-TACCATCAA-TTTTCATGCCCACTCAGAAATCAAAGGAGATCATTTTACGACCTACAACACTCCTTGGTTTACAGAC-GAT--C-T-------CATTCTGCCAAAAGAGATCG-T-GAAGGG-TGAA----GGATTATGAGAAGAAAGCCAAACTGTCTAGGTCCA-CAAGGATATTTT-TT-CAAGGAG--AATGTATGCAGTTTACATAAACTC--TGCTTACATTAGGCAAA-GCACACGTAATTACA-CAAC-CAATTCAGGAATTGGGCAATGACTACG-AAACAA-TATATTCAAGATCACGGACA-T-CTCATATAGGGAAA--CAATGTTT-AGTCTTGTCGGTGCATAGAAAACGA-----CATTG-----AACTGTGATCAAATTTGGT-GAA---TCTTTTTATTGGAAAAAA----------------TTCAGAAAA----------------TTTAAGAAATATCAATTGT-TC--C-TTCAA-ACA-GTT--CCTT-TATGGAAAGTG-CTC-T-T--CGG-AGA----C-GAAAATTCGATG-GTATT-CATTAGAGGTGTTTTGAG-CAGTTACAGTTT-C-C--AAGG-TGAGT----GAATATATCA--AGTG-AT-GCGCCAACAAAGTGC-GC--ATTAGACCCGATACC--CTAAGCGTTTT-GATAACAATTGTTGGA--ATGTG--TTTCAGACCAATTATCGGCCGAATTATTACAA-CA-AAT--CTTTTTTCAAGCAATCGACGGTGGCCAA---AC---GATTTCAGAAA-AGCTATTGTAGCGCA-TTGTACGGTCATTAATTAAGC-G-TAAGGACTTTAG-ACAAGGACGAATTAAAAAA------T-TA-CAGACATGTT-TCAAA-TTA---TTTCTATCTAAAATATTGG-AAAAGCGGTGGCAGCTA-ACTATG-----AACACATAAAACA-TTACCAGCTTACG--AC--CA-C-TGCAATCTGCCTACGAAAGTTGTCACTCAACTGAAACGGCTCAATaaa
gi|23 : ACCATGTACTCGCATTTTGA-ACA-CCT-AAAGTGCTCTGTTGATGTAAAAAAAAAAAACAACAACTTTTTTCGACTTTGTGTTATATTTCG-CCCACCGCCATCAAAATCAAAC-AATTCTC-CGGAATTCAA-TTTTCTTTGAAGAA
gi|11 : TCTAAAGCAAAC-CA-TTTGGCGGAACT-GATGTTTTTT--AAGAATTGGCTTGT-TAT---AACA-CCAGGGGAATTATG----AT--TA--CTTGGTG--------------------G-ATCTGAA-CTTCTCACCTAGACAACACACAAGGAAAAC----GACGTCAGAA-GTTCCTTGAGCTGCTGGAAGA-CAG-GGAAAC-TAGCGCA-GCCATATCT-GCGAACCAAC--ACATATCCGGGAGGCTACAATAC---TGGAC-GTTCTGTTATAACCAAAACAGG--GACAGTTCCAATTTTGT-TG-T-AG--CCC-T--CTAG-TTG-TGGA-T---C-C-GGATT-TATGCG-ACAACATAGGCAAC-TCCACTGGAAGA-C-CATTCGC-AATTG---------GC---------------------GCTC
gi|14 : GGAA--CAGTGTTT-TTTGAGGAATGGGC-ACAATTTTTGGACAGCC-------TT----GTTAT--TAACCCAGGGGAA-GT---TAAATTACTGG-TTATCTGAA-CTTT--ACCTAG-CAACAC----ACAGGACAAACGACGCCAGGAAGTTCCTTGAGCTGCTGA--GA-CAGGGGA--A-TGTCGCA-GC-ATATTT-GCGAACCAAC--ACATATCCGGG-GGC----ACATACTGAG-C-GTTCTC--ATAACCAA----AACGGACAGTCC-AATTTTGCGCG-G-TAGCCTC-TAGTTGG-T-G---GATC---C-T-GG-AT-TATGCG-ACAACAAAGGCAAC-TCCACTGA-AGACC-ATTTCGC-AATTC---------GC---------------------Cactgcttaaacttcaccaagcctcccaggaaagccgaa
gi|20 : tttt-CGCA-AC-ATATTTGCTAAC-CAACGCACATCTGGA-G-G-C----ACAT-TCTGGAC-GTTCTC--ATTTCCAA----AACGGACAGTCC-ACTTTTGCGTG-GTAG--CCC-T--CTAGTT-G-TAGATC---C-T-GG-CT-TATGCG-ACAACAAAGGC--CATTTactg
gi|3 : gtATTT-CTGATGCAAC--TTATCTTCATG-GTC----ATAC-CTTAGAT-GTGTTG--ATAACCAG----GGATGATAGCCC-AATATTGCATG-G-AA--CTCCT--TTCG-T-GGCAGA-A---CCT-GG-TA-TATGTG-ACAACAGTGGCAACATTAG-TGG-AGA-CCACCTTGC-GATTC---------GTACTTTGCTGTCTTTCAACAAACCTCAA---------CCGGAGAGG-AAAAA--TGTAA-CT-TTCCGGAAA-TGGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACACAAAGAAACA---TCCGCTGAAAAACTTGCTGTGC---A-CGACAATA---CTGTTTTACAAAC-TACCGTCAATTTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCT--AACACTCCTTGGTTTACAGAC-GAT--CTT-------CATTCTGCCAAAAGAGATCG-TCGAAGGGCTGAA---CGGATTATGAGAAGAA--CCAAACTGTCT--GTCCA-CAAGGATA--TT-TT-CAAGGAG-AAATGTATGCAGGTTAC-TAAACTC-TTGCT-ACATT--TTAAA-GCACA-AT-ATTACACCAACAAAATTGAGGAATTAGGCAATGACT-CG-AAACAA-T-TATcgcaattcgctcactgcttaact
gi|5 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaG-GCC----ATAC-CCTAGAT-GTTGTG--ATAGCGAG----GAATTGCAGCTCCATCGTTAAAGGTG-AA--CTA-T--AT-G-T-A-TAAA-AGACC-C-AG-CACTGCATG-ATAAAAATGGTCACCCTGC-TGG-TGATC-ATCTAGC-AAT
gi|4 : atcaacttacttggga---------------------CCTCC-----------CAG-GAAGCGAAAAACTGTGACCA-TTCCG-AAAGCTTTCCAGTATTGATAT-T-GCTCTTTT------TACCTGTGATCTAAATGAATCGAGTGCTCTCC-GCACCCTAGAGCGGTCTCTGCTGAA---CTTACTG-AC---AGTTACAATAGGACCCT----CAAACAGACCATCGA-TAAACAAGCTC-CTGTAAGATCTAAGGAGATAACTGTGCGGCCA--AATACACAGTGGTTCACTGAT-GAG--T-TGCTAGAGCA----GCCAAAAGAAAGCG-TCGACAAACAGAG---CGAACAATGAGACGAA--CAAAACTGAGT--GTCCA-TAGAGAAA--TT-TT-TAAGGAA-AATTGTTCTAAAGTGAC-CAAA-TC-TTGCT-AAAAT--GCAA--GAAGA-TT-ATTATGTTGGCAAA-TTCAAGAACTTGGAAACGATT---ACAACAAAT-TATACAA-ATCATTAATA-GACTT--ATGGGAATAAAAGATGATTCCATTTTGCCAGAACAT-AACAGTGATGATGACTTGCCAAAAATT--------------TTGCGATTTCTTTTTGGGA---AAAA----------------TT--AAAAA----------------TT--AGAG--ACGACCTATGTC--C-ACCTG-GTACGTCTCCAT-CTATGGA---TGATTCAT-TACGAGCTGATGTCCAG----TTTGCCGTGTGTTCCTCTAGATGTC-TTTAATCCTGTGTCAGCCA-C-GGAA--A-TCCGA----A---AAATTATCA-TG-AAAGCACCTCCAAAACCTTGCGAACTAGATCCAATTCCAACTAA-TCTGCT-TA-AGCAATGTTTGGACTCTGTGC-TT-----CCTATTATT-ACTGAA--ATCATAAACAGA----TCATTATCAA--ACTCAACAGT-GCC-ATCCTC---G--TTTAAGAATG-CA----------A-TTGTTCGACCACTTATCAAGC-GACAAGGGCTA--G-ACAAAGACGAATTTAAGAA------T-TATCG-TCCGGTA-TCCAATTTACCGTTCTTATCT-AAGTCCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-cttctcaagactttcaattttcaatatcaaaatcaacaagagagcgtaaaattgttagattcagaaaattacgtgatattgttattagtgaccttaataacattcgctcttctgtggaggtgcaaacttgtgaacctttcgtaatagaatcggtacaattttacaacataacacttaaaaacatgctagatgaaattgcacctgtacagtcaaaggtgactaccatccacccagactgtccgtggtacccatctgaacttcgagctgccaaaagggagcggcgaagggcggagaggcagatgcgtaggactcgtttgactgtccatcaggaaatttttcgtagtcaatgtgcccaggtatcaaaacttgctgttcagtgtaaaaggacgtactattcaagcaaaattgaagaagtgggtaaagatcagaaacagctat
gi|7 : g-CAAGCTC-CTGTAAGATCTAAGGAGATAACT--GCGGCAA--AATACACAGTGGTTCACTGATGAATTGC-TAG-----CA----GCCAAAAGAAAGCG-TCGACAAACAGAG---TGAAAAATGAGACGAA--TAAAACAGAGT--GTCCA-TA--GAAA--TTGTT-C------------TA---AAGTAAC-AAAAATC-TTGCT-AAAAT--GCAAG-AAAGA-TT-ATTATGTTGGCAAAATTCAAAACCTTGGAAACGATTAC--AAACAA-T-TATACAAAATCATTAATAGG-CTT--ATGGGAAATAAAGATGATTCCATTTTGCCAGAACAT-AACAGTGA-----TGATG-----AGCT--------------T-GC-----C------------AAAAAATTTTGCGATTTCTTTTTAGGAAAAATTTTTTTTTTTTTTTT--AGAG--ATGACCTATGTCCAC-GTGGT-AC--GTCTCCA--CTATGGATGATT-CAC-TAC--GAGCTGATGTTCAG----TTTGTCG-GTTTTCCTCTAGATATC-TTTAACCCTGTGTCAGCCT-C-GGAA--A-TCCGC----A---AAATTATCA-TGAAA-GCACCTCCAAAATCTTGCGAACTAGATCCAATTCCAACAAA-TCTGCT-TA-AGCAATGTTTGGA--ca
gi|5 : aa-TGCCAAAAGGGAGCGGC-GAAGGGCGGAGAGGCAGAT---GCGTAGGA--CTCGTTTGACT--GTCCATCA-GGAAA--TT-TTTC--GTAGTCAATGTGCCCAGGTATC-AAAACTTGCTGT--TCAGT--GTAAAAGGAC--GT-ACTATTCAAGCAAAATTGAAGAAGTGGGTAAAGA-T-CAGAAACAG-C-TATct
gi|8 : atcaacttacttgggaggccataccctagatgttgtgatagcgaggaattgcagctccatcgttaaaggtgaactatatgtataaaagacccagcactgcatgataaaaatggtcaccctgctggtgatcatctagcaatcttctcaagactttcaattttcaatatcaaaatcaacaagagagcgtaaaattgttagattcagaaaattacgtgatattgttattagtgaccttaataacattcgctcttctgtggaggtgcaaacttgtgaacctttcgtaatagaatcggtacaattttacaacataacacttaaaaacatgctagatgaaattgcacctgtacagtcaaaggtgactaccatccacccagactgtccgtggtacccatctgaacttcgagc------------AAAA----------------TTCAGAAAA----------------TT--AGAA--ATCATCTATGTT--C-CTCAA-ACA-GTTTCCCTTCTATGGAAAGTG-CTC-T-TC-GAGCACA----CAGAAAATTCGATG-GTATTCCATTAGAGGTG-TTTGAGCCAGTTACAGTTT-CCG--A--GGTGAGT----G---AT-TCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-CGTTTTTGA-AACAATGTTTGGA--GTGTGT-TT-C--ACCAATTATC-GTCGAA--ATTAT---CA-ACAAATCTTTTTCAG--AATCGACGGT-GCC-A---AC---GAATTTCAAAAAAG-T----------A-TTGTACG--CATTAATTAAGCGT-CAAGGACTT--G-AC-AGGACGAATTAAAAAA------T-TA-CA-GACTGTT-TCAAACTTACCTTTTCTATCTACAATATTGGAAAAAGCGGTGGAAACTAGACT-TG-A-AAAACACAT-AAACACTTACCAGCTT-CACGAC--CA-CGTGCAATCTGCCTACCGAAATTGTTACTCAACTGAAACGGCTCTA
gi|9 : taattctttattgga------------AAAA----------------TTCAGAAAA----------------TT--AGAA--ATCATCTATGTT--C-TTCAA-ACA-GTTTCCCTTCTATGGAATGTG-CTC-T-TT-GAGCAGA----CGGAAAATTCGATG-GTATTCCATTAGAGATG-TTTGAGCCAGTTACAGTTT-CCG--A--GGTGAGT----G---ATATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATAAGACCCGATACCCACTAA-CGTTTT-GA-AACAATGTTTGAA--GTGTGT-TT-C--ACCAATTATC-GCCGAA--ATTAT---TA-ACAAATCTTTTTCAG--AATCGACGGT-GCC-A---AC---GAATTTCAAAAAAGCT----------A-TTGTACGGCCATTGATTAAGCGT-CAAGGACTT--G-ACAAGGACGAATTAAAAAA------T-TA-CAGACCTGTT-TCAAACTTACCTTTTCTATCTAAAGTATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAATACGT-AAACACTTACCAGCTT-CACGAC--CA-CGTGC---------ACCGAAA-TGTCACTC-ACTGAAACGGCTCTA
gi|10 : ttctttattggaAGGAA------------------T--AGAG--ATGACCTATGTC--CATTCGGTACA---TCTCCATCTATGGATGATT-CAC-T-AA-GGGTTGA----TGTCCAATTTGGCG-GTTTTCCTCCAGATATC-TTTAATCCCGTCTCAGCCT------A--G-GGAATCCACA---AAATTACCATGG-AA-GCACCTCCAAAATCTTGCAAACTAGATCCAATTCCAAACAA-TCTGCT-TA-AGCAATGTTTGGA--CTCTCTGCTTC--G--AATTATT-ACTGAA--ACCATAAACAGA----TCATTTTCAA--ACTCAACAGT-G
gi|19 : tttttgggaaaATGTT--C-TTCAA-ACA-GTTTCCCTTCTATGGAAAGTG-CTC-T-TC-GAGCAGA----CAGAAAATTCGATG-GTATTCCATTAGAGGTG-TTTGAGCCAGTTACAGTTTCC-G--AG-G-TGAGT----G---ATATTATCAGTG-AT-GCACCAACAAAGTCCTGCCAATTAGACCCGATACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggaagcatctcgattggacaaacaccttgatata
gi|18 : TCAACAGT-GCC-A---TCCTCG--TTTAAGAATGTC-----------A-TTGTTCGACAACTTATCAAGC-GACAAGGGCTA--G-TCAAAGACGAATTTAAGAA------T-TA-TC-GTCTGGTATCCAATTTACCGTTCTTATCTAAAGTCCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACAC
gi|22 : CAACAGT-GCC-A---TC---CTCTTTTAAGA-ATTC----------A-TTGTTCGACAACTTATCAAGC-GACAAGGGCTA--G-TCAAAGACGAATTTAAGAA------T-TA-TC-GTCTGGT-ACCAATTTACCGTTCTTATCTAAAGTCCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACAC
gi|15 : TCAGAAAAAGCT----------AATTGTACG-CCATTAATTAAGCGT-CAAG-ACTT--GTACAAGGACGAA-TTAAAAAAAAAAAT-TA-CAGACCTGTT-TCAAACTTACCTTT-CTATCTAAAA-ATTGGAAAAAGCGGTGGCAGCTAGACT-TGTA-AAAACACAT-AA-CACTTACCAGCTT-C---ACGACAACGTGCAATCTGCTCACCGAAATTGTCACTCAACTGAAACGGCTCTAc
gi|17 : CT----------G-TTGTACGACCATTAATTAAAC--------AC-------CAAGGATGAATTTAAAAAA-----TATA-CAGACCTGTA-TCAAGCTCACATTTTGTATTTAAAATATTGGGGAAAACGGTGGCAGCTCGACT-TT-AGAAAACATCT-AAATGCT
gi|28 : aaaagTACCAGCTT-CACGAC--CA-CGTGCAATCTGCCaaatcatatttatgaccttgtgcaaatcatgtcacaggaacggctcta
7 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|12 ): GAAATCCGAAAAATTATCATGAAAGCACTCTCACTGCAAATCGTGCGACACCATTACCAATGTCCAAACTAGTCATGCACCGGAGATCGAAGTGAAGAAGCTCTGCGCTCCATTACTACTAAGCTCGAATAAAGTCCAGCCGTTTCTATGTCATTATTACAAGCTAGAAATCGTTCTAGATTACTCTTAGTTCTTAGCCATTAGTCTCTCCGTTAAGAATGATGCATATCTCATCGACCCAATCGATAATTCAAGCGACAACAGGGTCTATACAAAGACGAATTAGAATAATGCTGTCCGGTATCCCAAGAACTCTTCTTATTTCTAAAGTTCCGGTTCGAAAAGTAAC
Unaligned ( gi|16 ): AGATTGGCCGAAGTTTTTAGCAGACTGCGCTACAACAGATAGGAGCATTATAATAACGGGAGATTTGAACCTGCATCTTGACATTCCAACATGTAATGACACGATGAGGTTCAATAGTATCCTGCAGTCTTGCGGCATGCAGCAACATGTGAAGGAACCAACGCATGTCCGTGGACATACACTAGACGTGATCATCACCAGA
Unaligned ( gi|21 ): GCATGCAGCAACATGTGAAGGAACCAACGCATGTCCGTGGACATACACTAGACGTGATCATCACCAGAGATAATGACAAGATTATTTCCATGGTAGAAGTGACAGATCCTGGTTTATCAGACGGTTCTGGCAATGTTTCGCGTGATCATTTCGCAGT
Unaligned ( gi|24 ): AAAGACGAAAACTCTGACATCTCAACCGAAAGCTTTACAGTATTGAGATATTGCTATAGATTTTACGAAGTGATCTATAATGGAGGTCAAGTGCTCTCCGCTACCACTAGAGCGAGTCTCCTGATGACACTT
Unaligned ( gi|25 ): AGGGTTTTCCTCTAGATATCTTTATTCCTGAGTCAGCCTCGGAAATCCACAAACTTATCATAAAAGCACCTCCAAAATCTTGCGAACTAGA
Unaligned ( gi|26 ): ACGAAAACATCCACCAAAGACTGCATTTCAAATTAACCGAAAAGTACTACTTATATACTAGTACTTTAT
Unaligned ( gi|27 ): TCGATAAACAAGCTCCTGTAAGATATAAGGAGATACCTGTGCGGCCAAATACACAGTGGTTCACTG
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1 2 1 2 2 1 1 1 1 1 22 2 22 2 1 22 1 2222 1 111 2 1 1 33 22 2 1 33 111 1 1 11111 22 33 1 11 222 222 1 1 11111 1 11 1 22 1 1 1 33333333333333 11 1 1 1 1 1 1 1 22 11 333333 22 5555555555 1 1 33333 444444444444444444 3333333 111 111 1111 111 22 11 1111 111 111 111111 2 11 1111 333 77777777777777777777777777777777777777777777777 222 11 2 1 1 1 2222222 11 1 111 1 11111 111 1 2 22222222222 1 11 11 11 1 11 11 1111 222 11 1 11 1 44444444444444444444444444444444444444444444444444444444444444444444444444 33333333333333 11 22222222222 1111 22222 555555555 3333333333333 1111111111 44444 11111
lowQualScore : 5 0 5 0 1 0 2 5 5 5 66 5 4 2 5 77 2 0 77 0 5 77 2 3 7 7 6666 6 2 000 3 3 4 6 00 11 3 3 00 1 0 333 88 6 0 2 22 7 0 3 6 22222 00 0 00 0 3 55 3 3 33 2 111 3 3 222 0 0 88888 0 3 33 0 22 0 0 0 33333333333333 3 33 0 1 0 9 0 0 0 0 33 2 2 2 33 444444 2 2 33 2 3 2 3 3 0 8 3 0 1111111111 66 1 1 0 6 6 6 2 11 2 8 44444 1 0 5 444444444444444444 1 1 8 9999999 111 8 999 0 2222 0 0 0 1 222 11 6 0 6 6 11 5 8 6666 666 11 1 1 1 000 3 4 7 4 55 000 9999 66 3 6 6 6 1 6 6 6 1 1 666666 0 00 2222 6 11 99 3 7 000 6 777 1 77 77777777777777777777777777777777777777777777777 0 777 33 0 0 3 2 0 3 44 2 0 6666666 33 0 777 0 6 2 3 3 88888 3 3 777 3 0 2 2 0 1 6 22 1 1 7 1 99 1 22 1 6 1 66666666666 5 0 0 1 3 1 0 11 1 6 11 9 6 8 11 0 0 9 1 99 5 0 88 1 11 3 1 99 8 999 11 0 1 1 8888 8 8 4 6 3 222 33 6 9 2 0 00 0 2 33333333333333333333333333333333333333333333333333333333333333333333333333 777 33333333333333 77 6 5 9999 11 5 3 00 0 0 22 1 55 5 1 5 0 1 88888888888 0000 9999 5 5 66 1 1 1 8 5 0 1 66 5 888 6 44444 6 999999999 6 99 5 6666666666666 9 4 7777777777 5 55 777 1 4 22222 777 4 4 44444 4 4 777 1 777 4 2 3 55 8888 0 1 4 555 4 1 6 5 1 1 3
lowQualScore : . . . . . . . . . . .. . . . . .. . . .. . . .. . . . . .... . . ... . . . . .. .. . . .. . . ... .. . . . .. . . . . ..... .. . .. . . .. . . .. . ... . . ... . . ..... . . .. . .. . . . .............. . .. . . . . . . . . .. . . . .. ...... . . .. . . . . . . . . . .......... .. . . . . . . . .. . . ..... . . . .................. . . . ....... ... . ... . .... . . . . ... .. . . . . .. . . .... ... .. . . . ... . . . . .. ... .... .. . . . . . . . . . . ...... . .. .... . .. .. . . ... . ... . .. ............................................... . ... .. . . . . . . .. . . ....... .. . ... . . . . . ..... . . ... . . . . . . . .. . . . . .. . .. . . . ........... . . . . . . . .. . . .. . . . .. . . . . .. . . .. . .. . . .. . ... .. . . . .... . . . . . ... .. . . . . .. . . .......................................................................... ... .............. .. . . .... .. . . .. . . .. . .. . . . . . ........... .... .... . . .. . . . . . . . .. . ... . ..... . ......... . .. . ............. . . .......... . .. ... . . ..... ... . . ..... . . ... . ... . . . .. .... . . . ... . . . . . . .
lowQualScore : 0 0 0 0 0 0 5 5 0 0 55 0 0 5 5 55 5 0 55 0 5 55 5 3 3 3 3333 7 3 000 3 3 0 7 33 33 3 3 00 0 7 000 00 7 7 3 00 3 7 3 7 77777 77 7 77 0 2 88 2 2 88 5 000 2 2 222 0 0 55555 0 2 88 0 55 0 0 0 22222222222222 2 88 0 0 0 0 0 0 0 0 88 5 0 5 88 888888 0 5 88 0 2 5 2 2 8 0 2 8 8888888888 88 0 0 0 7 7 7 3 66 1 9 44444 0 8 0 444444444444444444 0 0 0 4444444 666 0 000 8 2222 8 8 6 0 444 00 4 6 0 4 00 6 0 3333 000 99 0 0 0 000 8 4 4 4 22 000 4444 11 7 7 7 7 0 3 7 7 0 0 888888 0 00 2222 7 33 22 2 3 555 7 555 0 33 00000000000000000000000000000000000000000000000 2 000 22 0 0 2 5 0 2 22 5 0 0000000 88 0 555 8 8 5 2 2 55555 2 2 555 2 0 0 0 0 0 7 00 0 0 2 0 22 0 00 0 4 0 22222222222 0 0 6 0 2 0 6 00 0 6 00 0 6 0 00 8 8 6 0 00 0 8 88 0 00 8 0 00 0 222 00 8 0 0 6666 0 0 0 5 0 555 88 5 8 5 0 55 0 5 44444444444444444444444444444444444444444444444444444444444444444444444444 111 66666666666666 99 6 0 9999 99 0 2 55 8 8 11 0 99 0 0 0 5 0 11111111111 6666 8888 6 0 00 0 0 0 3 7 7 0 77 7 999 7 55555 7 555555555 7 22 0 1111111111111 4 4 5555555555 3 55 000 0 0 55555 999 0 0 00000 0 0 999 4 000 8 1 9 55 5555 1 0 4 333 8 0 7 7 4 5 2
consensus : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTACC-GAAACGGTT-CCTGAT-GAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCATA--TCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGA-TTACATCCAGTCCAACAACGTCGATCTAA-TGGTT-TT---A-CTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TTC-AT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAGGG-G-TGG-GGG-TCTGGCGATTGTCCAC--TCAAAGC-AG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTACNATNTTTGGACAGCCTTATG-GTTAT--TA--CCAGGGGA-AGTA-TANA-TTACT--G-GTG-ATCTGAACTT-C--ACCTAGACGACACGCA-G-GAC-AACGACGCCAGGAAGTTCCTTGAGCTGCTGGAAGA--CAGGG-GAT-TA-CGCA-G-CATATTTGCGAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGCTC--ATAACCA----GGGATGACAG-CCC-A-ATNTTGCGTGG-AAC-CCTCTNG-T--G-CGGA-CCT-GG-TN-TATGCG-ACAACAANG--GCAACATTCA-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCG-AAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAATTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTTTGCGGCCNA--ACACNCNNTGGTTCACNGACGATCTGCATT----CTGCCAAAAGAGATCGTCGAAGGGCNGAGCGGATTATGAGAAGAA--CNAAACTGTCT--GTCCACAAGGATATT-TT--CAAGGAGAAATGTATGCAGGTTACN-AAACTCTTGCT-ACATT--GCAAAGCACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACA-N-CT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TTGG--A-------AAATTCAGAAAA--------------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NTGTGT-TT-CA--CCAATTATCG-CCGAAATTAT-AACA----AATCTTTTT-CAG--AATCGACGGTG-CCA---N-C---G-A-TTTNAAAAAAGCTA-TTGTA----------CGACC--AT---TAATT-AAGCG---ACAAGGACTN--G-ACAAGGACGAATTNAAAAA-----T-TA-CAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
Reference ( family-4004 ) : TTCGTGAAGGGAGGGTTTC-GGTCACAGATACCGTTCCACGCCGCACAAGGCGC-GGAACCAAGGCAGGTCGGANAAGTT-TCCGGGACACACAGGGTTGTAACCGGAAAGTGTGGAAGAATGGATGCATCCTTAAACAA--ACCGGGT-TAA--TGATAATAATC-TCATATCATTGTGAGG--ACTCTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCATATATCCTACCCGAAACGGTT-CCTGATNGAGCCAACCGTGAAGCTANCCCGATACTGATGTCAACA-ACGGGCAAANAGAATTGACGAATCCAGATCGTCGAAATATGTTCAAACTTGCTNNAAATTCACATAACTGA-GGTTCCAAAGGTTTAAAACA-ACTAGGACCACAAATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGA-T-ACATCCAGTCCAACA-CGTCGATCTAA-TGGTT-TT---A-CTGAAA-CATGGCT--AGGATCT-GATGACA-GATAA-TTC-AT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CANAA-ACCAAGGGCTGA-CACGTAGAG-G-TGG-GG--TCTGGCGATCGTCCAC--TCAAA-C-A--TTAGCGTGAAGCC--TGCGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGGTGTAAAAAA-AAA------CGACTTTTTTCGNCTTTGTGTTATATNTCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATNTTTCTTTGAAGAATGGGCTANNATNTTTGGACAGCCTTATG-GTTAT--TA--CCNGGNGA-AGT--T-TA-TTACT--G-G-G-ATCTGAACTT-C--ACCTAGACGACACGNA-G-GAC-AACGACGCCAGGAAGTTCCTTGAGCTGCTGGAAGA--CAGGG-GAT-TA-CGCA-G-CATATTTNCGANCCAACNCATNTCCGG--GGTCAC-ACCCTGGAC-GTTCTG--ATAACCA----GGGATGACAG-CCC-A-ATNTTGCGTGG-AAC-CCTNTNG-T--G-TAGA-CCC-GG-TN-TATGCG-ACAACAANG--GCAACATTNACTGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CT-TTCCG-AAAGTTGACCGAAATTGACAT-CAGCAATTTNAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACGTCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCGTCGATTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTTTGCGGCCNA--ACACNCNNTGGTTCACNGACGATCTGCATT----CTGCCAAAAGAGAGCGTCGAAGGGCNGAGCGGATNATGAGAAGAA--CNAAACTGACT--GTCCACAAGGAAATT-TT--CAAGGAGAAATGTACGCAGGTNACN-AAACTCTTGCT-ACANT--GCAAAGNACAN-TA-TTACGCCGGCAA--AATTCAAGAACTNGGNAACGACTACG-AAACAA-T-TATACAAGATCATTAATA-G-CT--TATGGGAAAAAAAGATGATTCCGTTTTGCCG-GAACATA-ACAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT----A-------AAATTCAGAAAA--------------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCNGACGGAAAATTCGACG-GTATTCCNCTAGAGGTGTTT-GAGCCAGTTNCAGCCT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-AN-GCGCCNACAAAGTCCTGCNAACTAGACCCGATNCCAACTAA-CGTNCTN-A-AGCAATGTTTGGA--NTGTGT-TTTCA--CCAATTATCG-CCGAAATTATAAACAGACAAATCTTTTT-CAA--AATCGACGGTG-CCA---N-C---G-A-TTTAAAAAAAGCTA-TTGTA----------CGACC--AT---TNATT-AAGCGG--ACAAGGACTN--G-ACAAGGACGAATTTAAAAA-----T-TA-CAGGCCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTNGACT-TG-A-AAAACACGTAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|1 : TTCGTGAAGG-AGGGTTTCAGGTCACAGATACCGTTCCA-GCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCAGAGAC-CA-AGGGTT-TGACCGGAATTTGTGGAA-ATTTGATGCATCCT-AAACAACTACGGGGTGTAAAATGATAATAATCATCAT-TCATTGTGAGAGCACTATTGATCACCGCGG-TCAGGGCCATCCATATCAGGCGTATTACCACATATTCTACC-GAAACGGTTTCCTGAATGAGCCAACCGTGAAGCT-TCCCGATACGAAT-TCAACACACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCCTCAAATTC-CATAATTGATGGTTCCAAAA---TAAAACACACTAGGACCATA--TCCCTGTGTGCGTTTGA-TTGT-GATCTTCTAGAA-TAATCATCATTGTCCATCAACGA-T-ACATCC-GTCTAACA-CATCGATCTAA-TGGTT-TT---A-CTGAAAACATGGCT--AGGATCTTGATAACA-GATAA-TTC-AT---TGC--T--C--TGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAAGACTGA-CACGTAGGGCG-TGG-GG--TCTGGCGATTGTCCAC--TCAAAGC-A--TTAGTGTGAGGCCG-TGTGAACAAAGATACCAT-TACTCGCATTTTGA-ATAC-TAGAGTGCTCTGTTGATGTAAAAAA----------CAACTTTTTTCGACTTTGTGTTATATATCGCC-ACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCAATTTTTCTTTGAAGAATGGGCTACC-TATCTGGACAGCCTTATGTGTTAT--TG--CCTGGTGA-GGTACT-TA-TCACG--G-G-G-ATCTCAATTT-C--ATCTAGATGATCCGAA-A-AACCAGAGATGCTAGAGCGTTGACAGAACTTTTAAAAGA--TCGTG-GAT-TA-CGCA-G-CATATTTCTGATGCAACACATCTTCAT--GGTCAT-ACCTTAGAT-GTGTTG--ATAACCA----GGGATGATAG-CCCGA-ATATTACATGG-AAC-TCTTTCG-T--G-CAGA-ACT-GG-TA-TATGTG-ACAACAGTG--GCAACATTTG-TGG-AGA-C-ACCTTGC-AATTC---------GT---------------------CCTCCA---------CCGGAGAAGAAAAAATTGTAAACT-TTTCGGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAAGAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAATTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGA-GATCT-CATT-----TGCCAAAAGAGATCGT-GAAGGGCTGAACGGATTAAGAGAAGAA--CGAAACTGTCT--GTCCACATGGATATT-TT--CAAGGAGAAATGTATGCAGGTTACT-AAACTCTTGC--ACATT--GTAAAGCACAG-TA-TTACACCAACAA--AATTCAGGAATTAGGCAATGACT-CGAAAACAA-T-TATTCAAGATCACGAACA-T-CT--CATGGGGAAAACCAATGTTTCAGTCTTGCCGTG--CATG-AAAACGAAC-----TTG-----AACT--------------T-GC-----------A-----TC----------A-------AAATTCAGAAAA--------------TT--AGAAATCATTTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTT-GAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-TGTTTTG-A-AACAATGTTTGGA--GTGTGT-TTTCA--CCAACTATCG-CCGAAATTAT---C-----AATTTTTTT-CAG--AATCGACGGTG-CCA---A-C---GAA-TTTAAAAACATCTA-TTGTA----------CGGCC--AT---TAATT-AAGCT----CAAGGACTT--G-ACAAGGACGAAATTAAAAA-----T-TA-CA-ACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAAT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTC---ACCACGCGCAGTCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|10 : TTT-TT----GGG-----AAA---AGGAA----------------T--AGAGATGACCTAT-GT-C--CA-TTCGGTACA--TCTCCATCTATGGATGATTCACTAAGGGTTGATGTCCAATTTGGCG-GTTTTCCTCCAGATATCTTT-AATCCCGTCTCAGCCT------A--G-GGAATCCACAAA---ATTACCATGG-AA-GCACCTCCAAAATCTTGCAAACTAGATCCAATTCCAAACAA-TCTGCTT-A-AGCAATGTTTGGA--CTCTCTGCTTCG----AATTATTA-CTGAAACCATAAACAG----ATCATTTT-CAA--ACTCAACAGTG-
gi|11 : TCTAAAGCAAAC-CA-TTTGGCGGAACT-GATGTTTTTT--AAGAATTGGCT----TGTT---ATAAC---------------A--CCAGGGGA-ATTA-T-GA-TTACTTGGTG-G-ATCTGAACTT-CTCACCTAGACAACACACAAG-GAA-AACGACGTCAG-AAGTTCCTTGAGCTGCTGGAAGA--CAGGGAAAC-TAGCGCA-GCCATATCTGCGAACCAACACATATCCGGGAGGCTACAATACTGGAC-GTTCTGTTATAACCAAAACAGG--GACAGTTCC-A-ATTTTGT-TGT-AGC-CCTCTAGTT--G-TGGA-TCC-GGATT-TATGCG-ACAACATAG--GCAAC-TCCACTGGAAGA-C-CATTCGC-AATTG---------GC---------------------GCTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggaagcatctcgattggacaaacaccttgatata
gi|12 : ----------CGACCCAATCGATAATTCAAGCGACAACAGGGTCTA--T-ACAAAGACGAATTAGAATA-----A-TG-CTGTCCGGTATCCCAAGA---ACTCTTCTTATTTCTAAAGTTCCGGTTCGAAAAactgcttaaacttcaccaagcctcccaggaaagccgaa
gi|13 : gaaatccgaaaaattatcatgaaagcactctcactgcaaatcgtgcgacaccattaccaatgtccaaactagtcatgcaccggagatcgaagtgaagaagctctgcgctccattactactaagctcgaataaagtccagccgtttctatgtcattattacaagctagaaatcgttctagattactcttagttcttagccattagtctctccgttaagaatgatgcatatctcatAAGTT-TCCGGGACACACAGGGTTGTAACCGGAAAGTGTGGAAGAATGGATGCATCCTTAAACAA--ACCGGGT-TAA--TGATAATAATC-TCATATCATTGTGAGG--ACTCTTGATCAC-GCGGATCATTGCCATCCATA-CAGG-GT-TTA-CA-ATATCTTACCCGAAACGGTT-CTTGATGGAG-CA--CGTGAAGCTA-CCCGATACTGATGTCAACA-ACGG--AAACAGAATTGAC--ATCC-GAT-GTCGAAATATGTTCAAACTTGCTACAAATTCACATAACTGA-GGTT--AAAGGTTTAAAAT---CTAGGACCATAAATCACTATGTGC-TTTGAATTGTA-ATC-TCTAGAAATAA--ATCATgtaac
gi|14 : GGAA--CAGTGTTT-TTTGAGGAATGGGC-ACAATTTTTGGACAGCCTT----GTTAT--TAACCCAGGGGA-AGT--TAAA-TTACT--G-GTT-ATCTGAACTT-T--ACCTAG-CAACACACA-G-GACAAACGACGCCAGGAAGTTCCTTGAGCTGCTG--AGA--CAGGG-GAA-TGTCGCA-G-CATATTTGCGAACCAACACATATCCGG--GGGCAC-ATACTGAGC-GTTCTC--ATAACCA----AAACGGACAG-TCC-A-ATTTTGCGCGG-TAG-CCTCTAG-TTGG-TGGATCCT-GG-AT-TATGCG-ACAACAAAG--GCAAC-TCCACTGA-AGACC-ATTTCGC-AATTC---------GC---------------------C
gi|15 : ttttTCAGAAAAAGCTAATTGTA----------CG-CC--AT---TAATT-AAGCGT---CAAG-ACTT--GTACAAGGACGAATTAAAAAAAAAAAT-TA-CAGACCTGTTTC---AAACTTACCTTTC-TA--TCTAAAA-----ATTGGAAAAAGCGGTGGCAGCTAGACT-TGTA-AAAACACAT-AACAC-T-TACCAGCTTCACGACAACGTGCAATCTGCTCACCGAAATTGTCACTCAACTGAAACGGCTCTAactg
gi|16 : GCA-A-CATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGATC--ATCACCA----G
gi|17 : agattggccgaagtttttagcagactgcgctacaacagataggagcattataataacgggagatttgaacctgcatcttgacattccaacatgtaatgacacgatgaggttcaatagtatcctgcagtcttgcggcatgcaAAAAGCTG-TTGTA----------CGACC--AT---TAATT-AAAC----------AC-------CAAGGATGAATTTAAAAAA----TATA-CAGACCTGTATC---AAGCTCACATTTTGTA--TTTAAAAT----ATTGGGGAAAACGGTGGCAGCTCGACT-TT-AGAAAACATCTAAATGC-TAAATCATATTTATGACCTTGTGCAA-------ATCA----TGTCA--CA---GGAACGGCTCTAa
gi|18 : TCAACAGTG-CCA---T-CCTCG---TTTAAGAAT-GTCA-TTGTT----------CGACA--AC---TTATC-AAGCG---ACAAGGGCTA--G-TCAAAGACGAATTTAAGAA-----T-TA-TCGTCTGGTATC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACAC
gi|19 : AT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCC-G--AG-G-TGAGT----GAT---ATTATCAGTG-AT-GCACCAACAAAGTCCTGCCAATTAGACCCGATAC
gi|2 : GTCCAT-AACGA-TTACATTCAGTCCA-CA-AATCGATATAAATGGTT-TTTAAA-CTGAAA-CA-GGCTTGAGTAGCT-GAATACATGATAA-TTC-ATCATTGCCAT--CTGCGAAT-AACCGACCAGATGGGAAGCATTTCATTTCACAACACCAAGAGCTGATCACGTAGAG-GGTGG-GGGATCTGGCGATTGTA-AT--TCAAA-C-AG-TTAGTGTAAA-CC--TGTGAACAAG-ATAC-ATGTAC-CGCATTTTGACACACCTAGA-TGCTCTGTTGATGTAAAA------------CAACTTTTTTTCGCTTTGTGTTATAATTCGCC-ACCGCCATCAACATCAAACCAA-TCTC-CGGA-TTCAATTTTT--TTGAA--ATGGGCTAAC-TATCTG-ACAGC-TCATG--TTAT--TG--C-TGGTGAGAGT--A-CT-TTACG--G-G-GGATC--ATTTT-C--ATCT-GATGATCCGAA-AAGA-----GATTCTAGAGCGTTTCA-GAACTTTTAAAAGAATC-GTG-GATATA-AGCAAG-CATATTTCTGATGCAAATAATCTTCAT--GGTCAT-ACT-TAGATTGTGTCG--ATAAC-A----GGGATGA-AG-CCC-ATATGTTACATGC-AAT-CCTGTTG-T--GGCAGA-CCTTGG-TAATATGTGCACAA--ACGTTGCA-CATTA--TGG-AGA-C-ACCTTGCCGATTCCGACTTGGCGT---------------------CGTTCAAACAACTTCCCGGAGAGGAAAA---TGTA--CTATTTCG-AA-GTTGAC-GAAATTGACATACAGCAATTTAAAAAGAGAC-TG-GATTT---T---TCGAGT--TTATTCACAC---AAAGAAAC-TCC--TGAAAAACTTGCTGTGCGAAA-CT-CAA-A---CCGTTTTACAAAC-TACCATCAATTTTCATGCCCACTCAGAAATCAAAGGAGATCATTTTACGACCTACAACACTCCTTGGTTTACAGACGATCT-CATT----CTGCCAAAAGAGATCGT-GAAGGGTGAAG--GATTATGAGAAGAAAGCCAAACTGTCTAGGTCCACAAGGATATT-TTTTCAAGGAGAA-TGTATGCAGTTTACATAAACTCT-GCTTACATTAGGCAAAGCACACGTAATTACAC----AACCAATTCAGGAATTGGGCAATGACTACG-AAACAA-TATATTCAAGATCACGGACA-T-CTCATATAGGGAAACAA--TG-TTTAGTCTTGTCG-GTGCATAGAAAACGACA-----TTG-----AACTGTGATCAAATTTGGT-GA-----------A-----TCTTT-TT----ATTGGAAAAAATTCAGAAAA--------------TTTAAGAAAT-ATCAATTGTTC--C--TTCAA-ACAGTT--CCTT-TATGGAAAGTGCTCTTCGG--AGACG-AAAATTCGATG-GTATTC-ATTAGAGGTGTTTTGAGC-AGTTACAGTTT-C-C--AAGG-TGAGT----GAATATATCA--AGTG-AT-GCGCCAACAAAGT---GCGCATTAGACCCGATACC--CTAAGCGTTTTG-ATAACAATTGTTGGA--ATGTGT-TT-CAGACCAATTATCGGCCGAA-TTATTA-CA-ACAAATCTTTTTTCAAGCAATCGACGGTGGCCA---AAC---G-A-TTTCAGAAAAGCTA-TTGTAGCGCATTGTACGGTC--AT---TAATT-AAGCG----TAAGGACTTTAG-ACAAGGACGAATTAAAAAA-----T-TA-CAGACATGTTTC---AAA-TTA---TTTCTA--TCTAAAAT----ATTGG-AAAAGCGGTGGCAGCTA-ACTATG-----AACACATAAA-ACAT-TACCAGCTT-ACGACCAC-TGCAATCTGCCTACGAAAGTTGTCACTCAACTGAAACGGCTCAAT
gi|20 : -CGCA-A-CATATTTGCTAACCAACGCACATCTGG--AGGCAC-ATTCTGGAC-GTTCTC--ATTTCCA----AAACGGACAG-TCC-A-CTTTTGCGTGGTAGC-CCTCTAGTT--G-TAGATCCT-GG-CT-TATGCG-ACAACAAAG--GC--CATT----------------TCGC-AATTC---------GC---------------------TC
gi|21 : gtGCA-A-CATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGATC--ATCACCA----GAGATAAactgcttaact
gi|21 : gcatgcaTGATCAC-GCGAAACATTGCCAtgacaagattatttccatggtagaagtgacagatcctggtttatcagacggttctggcaatgtttcgcgtgatcatttcgcagt
gi|22 : gcatgcagcaacatgtgaaggaaccaacgcatgtccgtggacatacactagacgtgatcatcaccagagataatgacaagattatttccatggtagaagtgacagatcctggtttatcagacggttcCAACAGTG-CCA---T-C---C-T-CTTTTAAGAATTCA-TTGTT----------CGACA--AC---TTATC-AAGCG---ACAAGGGCTA--G-TCAAAGACGAATTTAAGAA-----T-TATC--GTCTGGTAC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACACtttcgcagt
gi|23 : ACCATGTACTCGCATTTTGA-ACACCTAAAGTGCTCTGTTGATGTAAAAAA-AAAAAACAACAACTTTTTTCGACTTTGTGTTATATTTCGCCCACCGCCATCAAAATCAAAC-AATTCTC-CGGAATTCAAT-TTTCTTTGAAGAAc
gi|27 : -CAAGCTC-CTGTAAGATATAAGGAGATACCTGTGCGGCCAA--ATACACAGTGGTTCACTG
gi|28 : tcgataaa-TACCAGCTTCACGACCACGTGCAATCTGCC
gi|3 : TTCGTGAAGGGAGGGTTTC-GGTCACAGATACCGTTCCACGCCGCACAAGGCGC-GGAACCAAGGCAGGTCGGA
gi|3 : TGCCATCCATATCAGG---ATTACCATAT---CTACC-GAAACGGTT-CCTGAT-GAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGGGCAAAGAAAATTGACGA-TCTAGATCGTCGAAATATAT-CAAACTTGCTCAAAATTCACATAATTGA-GGTTCCAAAAGTT-AAAACA-ACTAGGACCACA--TCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGA-TTACATCCAGTCCAAAAACATCGATCTAA-TGGTT-TT---AACTAAAA-CATGGCT--ATGATCT-GAT-ACA-AATAA-TTCCAT---TGCA-T--C--TGAATTTAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGG-CTGA-CACGTAGGG-G-TGG-GGG-TCTGGCGATTGTCCAC--TCAAAGC-AGATTAGTGTGAGGCC--TGTGAACAAAGATACCATGTACTCGCGTTTTGA-ACACCTAGAGTGCTATGTTGGTGTAAAAAA-AAACC----CAACTTTTTTCGTCTTTGTGTTATATATCGCCCACCGCCGTCACAATCAAAC-AA-TCTC-CGGAATTCAAT-TTTCTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|3 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngATTTCTGATGCAACTTATCTTCAT--GGTCAT-ACCTTAGAT-GTGTTG--ATAACCA----GGGATGATAG-CCC-A-ATATTGCATGG-AACTCCTTTCG-T--GGCAGAACCT-GG-TA-TATGTG-ACAACAGTG--GCAACATT-AGTGG-AGA-CCACCTTGC-GATTC---------GTACTTTGCTGTCTTTCAACAAACCTCAA---------CCGGAGAGGAAAAA--TGTAA-CT-TTCCG-GAAATGGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CGACAATA---CTGTTTTACAAAC-TACCGTCAATTTTCATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGACGATCTTCATT----CTGCCAAAAGAGATCGTCGAAGGGCTGAACGGATTATGAGAAGAA--CCAAACTGTCT--GTCCACAAGGATATT-TT--CAAGGAGAAATGTATGCAGGTTACT-AAACTCTTGCT-ACATT--TTAAAGCACAA-TA-TTACACCAACAA--AATTGAGGAATTAGGCAATGACT-CG-AAACAA-T-TATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|4 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnna---------------------CCTCC----------CAGGAAGCGAAAAAC-TGTGA-CCATTCCG-AAAGCTTTCCAGTATTGATAT-T-GCTCTTTT------TACCTGTGATCTAAATGAATCGAGTGCTCTCC-GCACCCTAGAGCGGTCTCTGCTGAA---CTTACTG-AC---AGTTACAATAGGACCCT----CAAACAGACCATCGATAAACAAGCTC-CTGTAAGATCTAAGGAGATAACTGTGCGGCCAA--ATACACAGTGGTTCACTGATGAGTTGC--TAGAGCAGCCAAAAGAAAGCGTCGACAAACAGAGCGAACAATGAGACGAA--CAAAACTGAGT--GTCCATAGAGAAATT-TT--TAAGGAAAATTGTTCTAAAGTGACC-AAA-TCTTGCT-AAAAT--GCAA-GAAGAT-TA-TTATGTTGGCAA--A-TTCAAGAACTTGGAAACGATTAC---AACAAAT-TATACAA-ATCATTAATA-GACT--TATGGGAATAAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATGATGACTTGCCAAAAATT--------------TTGC-----------GATT--TCTTT-TTGGGAA-------AAATT--AAAAA--------------TT--AGAGACGACCTAT-GT-C--CACCTGGT-AC-GTCTCCAT-CTATGGATGATTCATTACGAGCTGATGTCCAGTTTGCCGTGTGTTCCTCTAGATGTCTTT-AATCCTGTGTCAGCCA-C-GGAA--A-TCCGA----AAA---ATTATCA-TG-AAAGCACCTCCAAAACCTTGCGAACTAGATCCAATTCCAACTAA-TCTGCTT-A-AGCAATGTTTGGACTCTGTGC-TT-----CCTATTATTA-CTGAAATCATAAACAG----ATCATTAT-CAA--ACTCAACAGTG-CCATCCT-C---G---TTT-AAGAATGCAA-TTGTT----------CGACC--AC---TTATC-AAGC-G--ACAAGGGCTA--G-ACAAAGACGAATTTAAGAA-----T-TA-TCGTCCGGTATC---CAATTTACCGTTCTTA--TCT-AAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-
gi|6 : gTGTGTAC-ATTGAACTGTAGATTTACACGGAATAA--AACATTGTCCATCAATGAAT-TCATCAAGTCTAACAATGTCGACCTCA-TGGTGATG---A-CAGAAA-CATGGCT--TGGTTCT-GA-GATA-GATAAATCC-AT---T-C--TAGC--CGTACTAAC--CCCAGAGGACTACATTGTCATC-CAGAA-ACCAAGA-TTAA-CACGTAAAG-G-TGGTGG--TCTG-CGGTCGTCCACAGTAATA-CGA--TCAGCGTGAAGCCGATACG--CCAGGACGTTTCATACTCTCATTTTGA-ACATTTAGAGTGTTCTGTTAGCGTCAAAAATGAA------CA----TATCCGTCTCTGTGTCATTTATCGCCCACCACCATCTAAAGCAAAC-CA-TTTT-CGGAACTCG-TGTTTTTTTGAGGAATGGGC-ACAATTTTTGGACAGCCTT----GTTATAACA--CCAGGGGA-AGT--TATAATTACT--G-GTG-ATCTGAACTTTC--ACATAGACAACACACA-G-GAC-AACGACGCCAGGAAGTTCCTTGAGCTGCTGGAAGA--CAGGG-GAT-GT-CGCA-G-CATATTTGCGAACCAACGCATATCCGG--GGTCAC-ATACTGGAC-GTTCTC--ACAACCA----ca
gi|7 : -CAAGCTC-CTGTAAGATCTAAGGAGATAACT--GCGGCAAA--ATACACAGTGGTTCACTGATGAATTGCTAG----CAGCCAAAAGAAAGCGTCGACAAACAGAGTGAAAAATGAGACGAA--TAAAACAGAGT--GTCCATA--GAAATTGTT--C-----------TA---AAGTAACA-AAAATCTTGCT-AAAAT--GCAAGAAAGAT-TA-TTATGTTGGCAA--AATTCAAAACCTTGGAAACGATTAC--AAACAA-T-TATACAAAATCATTAATAGG-CT--TATGGGAAATAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATG-----ATG-----AGCT--------------T-GCCAAAAAATTTTGCGATTTCTTT-TT----A-------GGA-----AAAATTTTTTTTTTTTTTTT--AGAGATGACCTAT-GT-CCAC--GTGGT-AC-GTCTCCA--CTATGGATGATTCACTACGAGCTGATGTTCAGTTTGTCG-GTTTTCCTCTAGATATCTTT-AACCCTGTGTCAGCCT-C-GGAA--A-TCCGC----AAA---ATTATCA-TGAAA-GCACCTCCAAAATCTTGCGAACTAGATCCAATTCCAACAAA-TCTGCTT-A-AGCAATGTTTGGA--CTaaa
gi|8 : aa-----TCTTTATTGGA-A-------AAATTCAGAAAA--------------TT--AGAAATCATCTAT-GT-T--C--CTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCACACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT----TCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-CGTTTTTGA-AACAATGTTTGGA--GTGTGT-TT-CA--CCAATTATCG-TCGAAATTAT---CA-ACAAATCTTTTT-CAG--AATCGACGGTG-CCA---A-C---G-AATTTCAAAAAAG-TA-TTGTA----------CG--C--AT---TAATT-AAGCGT---CAAGGACTT--G-ACA-GGACGAATTAAAAAA-----T-TA-CAGAC-TGTTTC---AAACTTACCTTTTCTA--TCTACAAT----ATTGGAAAAAGCGGTGGAAACTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTTACTCAACTGAAACGGCTCTA
gi|9 : taat-----TCTTTATTGGA-A-------AAATTCAGAAAA--------------TT--AGAAATCATCTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAATGTGCTCTTTGAGCAGACGGAAAATTCGATG-GTATTCCATTAGAGATGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATAAGACCCGATACCCACTAA-CGTTTTG-A-AACAATGTTTGAA--GTGTGT-TT-CA--CCAATTATCG-CCGAAATTATTAACA----AATCTTTTT-CAG--AATCGACGGTG-CCA---A-C---GAA-TTTCAAAAAAGCTA-TTGTA----------CGGCC--AT---TGATT-AAGCGT---CAAGGACTT--G-ACAAGGACGAATTAAAAAA-----T-TA-CAGACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAATACGTAAACAC-T-TACCAGCTTCACGACCACGTGC---------ACCGAAA-TGTCACTC-ACTGAAACGGCTCTA
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|5 ): ATCAACTTACTTGGGAGGCCATACCCTAGATGTTGTGATAGCGAGGAATTGCAGCTCCATCGTTAAAGGTGAACTATATGTATAAAAGACCCAGCACTGCATGATAAAAATGGTCACCCTGCTGGTGATCATCTAGCAATCTTCTCAAGACTTTCAATTTTCAATATCAAAATCAACAAGAGAGCGTAAAATTGTTAGATTCAGAAAATTACGTGATATTGTTATTAGTGACCTTAATAACATTCGCTCTTCTGTGGAGGTGCAAACTTGTGAACCTTTCGTAATAGAATCGGTACAATTTTACAACATAACACTTAAAAACATGCTAGATGAAATTGCACCTGTACAGTCAAAGGTGACTACCATCCACCCAGACTGTCCGTGGTACCCATCTGAACTTCGAGCTGCCAAAAGGGAGCGGCGAAGGGCGGAGAGGCAGATGCGTAGGACTCGTTTGACTGTCCATCAGGAAATTTTTCGTAGTCAATGTGCCCAGGTATCAAAACTTGCTGTTCAGTGTAAAAGGACGTACTATTCAAGCAAAATTGAAGAAGTGGGTAAAGATCAGAAACAGCTAT
Unaligned ( gi|24 ): AAAGACGAAAACTCTGACATCTCAACCGAAAGCTTTACAGTATTGAGATATTGCTATAGATTTTACGAAGTGATCTATAATGGAGGTCAAGTGCTCTCCGCTACCACTAGAGCGAGTCTCCTGATGACACTT
Unaligned ( gi|25 ): AGGGTTTTCCTCTAGATATCTTTATTCCTGAGTCAGCCTCGGAAATCCACAAACTTATCATAAAAGCACCTCCAAAATCTTGCGAACTAGA
Unaligned ( gi|26 ): ACGAAAACATCCACCAAAGACTGCATTTCAAATTAACCGAAAAGTACTACTTATATACTAGTACTTTAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 1 1 1 1 1 1 1 11 2222 1 1 11 1 2222 1 111 1 1 1 11 11 1 1 11 111 1 1111 22 11 1 11 111 1 1 222 1 11 1 22 1 1 1 33333333333333 11 1 1 111 1 1 1 11 11 11 22 5555555555 1 1 222222 444444444444444444 22222 1111 111111 1111111111 1 111111 2222 1 111 111111 2 1111 222 77777777777777777777777777777777777777777777777 222 11 1 1 2222222 11 1 111 11111 111 1 1 1 3333333333 1 11 1111 22 11 1 11 1 222222222222222222222222222222222222222222222222222222 111111 444444444444 11 22222222222 1111 1111 2222 3333333 1111111111 11111
lowQualScore : 5 5 5 5 5 1 5 5 5 22 5 1 1 5 88 1 4444 5 5 77 1 3 7 7 6666 6 2 000 3 3 3 88 44 3 3 88 333 7 6 6 1 7 3 6 2222 00 88 0 3 55 3 3 33 2 3 3 3 111 0 0 777 0 3 33 0 00 0 0 0 33333333333333 3 33 0 0 0 111 0 0 0 22 2 2 33 2 6 66 2 55 3 2 3 3 0 8 3 0 1111111111 0 1 1 0 6 6 6 2 11 5 4 333333 1 99 444444444444444444 99999 99 888 5555 3 777777 5 8888888888 3 1 55 6 2 2 99 3 999999 6 0000 5 5 0 333 0 1 777 1 4 1 4 8888 0 9999 66 3 6 6 6 1 6 6 6 1 666666 0 0 6 2222 6 11 99 3 7 666 6 777 1 77 77777777777777777777777777777777777777777777777 0 777 33 9 3 2 0 3 33 2 0 6666666 33 0 777 0 9 2 3 3 88888 3 3 777 3 0 0 3 1 6 22 1 1 8 0 0 1 77 1 22 0 6 3 6666666666 3 6 1 5 55 99 1 4 99 6 4 6 6 99 7 8888 66 3 77 0 9999 3 99 6 1 2 77 6 2 00 99 1 1 2 9999 666 1 6 2 11 33 6 9 2 0 00 0 1 333333333333333333333333333333333333333333333333333333 666666 77 888888888888 44 1 77 6 5 9999 11 5 3 00 11 0 22 0 55 5 0 5 0 0 88888888888 0000 9999 5 5 55 0 1 0 6 5 0 1 77 5 888 77 6 3333 6 99 0000 99 6 5 66 9999999 1 4 7777777777 5 55 777 0 4 8 777 0 777 4 4 1 00000 4 0 3 1 777 4 2 3 55 8888 0 1 4 4 4 6 5 1 1 3
lowQualScore : . . . . . . . . . .. . . . . .. . .... . . .. . . . . .... . . ... . . . .. .. . . .. ... . . . . . . . .... .. .. . . .. . . .. . . . . ... . . ... . . .. . .. . . . .............. . .. . . . ... . . . .. . . .. . . .. . .. . . . . . . . . .......... . . . . . . . . .. . . ...... . .. .................. ..... .. ... .... . ...... . .......... . . .. . . . .. . ...... . .... . . . ... . . ... . . . . .... . .... .. . . . . . . . . . ...... . . . .... . .. .. . . ... . ... . .. ............................................... . ... .. . . . . . .. . . ....... .. . ... . . . . . ..... . . ... . . . . . . .. . . . . . . .. . .. . . . .......... . . . . .. .. . . .. . . . . .. . .... .. . .. . .... . .. . . . .. . . .. .. . . . .... ... . . . .. .. . . . . .. . . ...................................................... ...... .. ............ .. . .. . . .... .. . . .. .. . .. . .. . . . . . ........... .... .... . . .. . . . . . . . .. . ... .. . .... . .. .... .. . . .. ....... . . .......... . .. ... . . . ... . ... . . . ..... . . . . ... . . . .. .... . . . . . . . . . .
lowQualScore : 0 5 0 0 5 0 5 0 0 00 0 0 0 5 00 0 5555 5 5 55 0 3 3 3 3333 7 0 000 3 3 3 33 77 3 3 33 000 3 7 7 0 3 3 7 0000 77 33 0 2 88 2 2 88 5 2 2 2 888 0 0 555 0 2 88 0 55 0 0 0 22222222222222 2 88 0 8 0 000 0 0 0 55 5 5 88 5 5 55 5 00 2 5 2 2 8 0 2 8 8888888888 8 0 4 0 7 7 7 3 66 0 0 888888 0 44 444444444444444444 00000 77 333 2222 5 333333 2 3333333333 7 5 77 7 5 0 22 2 222222 7 1111 0 0 0 111 9 0 888 0 4 0 4 1111 1 4444 11 7 7 7 7 0 3 7 7 0 888888 7 0 7 2222 7 33 22 2 3 888 7 555 0 33 00000000000000000000000000000000000000000000000 2 000 22 8 2 5 0 2 55 5 0 0000000 88 0 555 8 2 5 2 2 55555 2 2 555 2 0 0 3 0 7 00 0 0 6 4 4 0 99 0 00 4 6 7 2222222222 0 7 0 2 88 22 0 0 22 0 0 7 7 22 3 2222 77 7 77 8 3333 7 22 7 7 5 77 7 2 00 22 0 0 2 0000 888 0 5 5 00 88 5 8 5 0 55 0 0 666666666666666666666666666666666666666666666666666666 000000 99 666666666666 44 4 99 6 0 9999 99 0 2 55 99 8 11 8 99 0 8 0 5 8 11111111111 6666 8888 6 0 88 8 0 8 6 7 7 3 00 7 999 99 7 3333 7 22 8888 22 7 0 77 4444444 0 4 5555555555 3 55 000 3 0 6 000 5 999 0 0 0 00000 0 8 7 4 000 8 1 9 55 5555 1 7 4 4 4 7 7 4 5 2
consensus : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTTATG-GTTAT--TA--CCGGGGGAAGT-ATA-ATTACN-GGTG-ATCTGAACTT-C--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GAT-TA-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-ATNTTGCGTGG-AAC-CCTCTNG-T--G-CGGA-CCT-GG-TN-TATGCG-ACAACAANG--GCAACATTCG-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTGCATT-----CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT---GG--AAAAA-----------TTCAGAAAATT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTAT-AA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAN-C---G-A-TTTCAAAAAAGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGACAA---GGACTN--G-ACAAGGACGAA-TTAAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAA-CACT-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
Reference ( family-4004 ) : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACGTCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTTATG-GTTAT--TA--CCAGGGGAAGT-ATANATTACT-GGTG-ATCTGAACTT-C--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCTTGAGC-TGCTGGAAGA--CAG------GG-GAT-TA-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-ATNTTGCGTGG-AAC-CCTCTNG-T--G-CGGA-CCT-GG-TN-TATGCG-ACAACAANG--GCAACATTCA-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTTTGCGGCCNA--ACACNCNNTGGTTCACNGACGATCTGCATT-----CTGCCAAAAGAGATCGTCGAAGGGCNGAGCGGATTATGAGAAGAA--CNAAACTGTCT--GTCCACAAGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACN-AAACTCTTGCT-A--CATT--GC-AAAGCACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACAN-CT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT---GG--AAAA------------TTCAGAAAATT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTAT-AA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAN-C---G-A-TTTNAAAAAAGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGACAA---GGACTN--G-ACAAGGACGAA-TTNAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAA-CACT-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|1 : TTCGTGAAGG-AGGGTTTCAGGTCACAGATACCGTTCCA-GCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCAGAGAC-CA-AGGGTT-TGACCGGAATTTGTGGAA-ATTTGATGCATCCT-AAACAACTACGGGGTGTAAAATGATAATAATCATCAT-TCATTGTGAGAGCACTATTGATCACCGCGG-TCAGGGCCATCCATATCAGGCGTATTACCACATATTCTA-CCGAAACGGTTTCCTGAATGAGCCAACCGTGAAGCT-TCCCGATACGAAT-TCAACACACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCCTCAAATTC-CATAATTGATGGTTCCAAAA---TAAAACACACTAGGACCAT--ATCCCTGTGTGCGTTTGA-TTGT-GATCTTCTAGAA-TAATCATCATTGTCCATCAACGAT-ACATCC-GTCTAACA-CATCGATCTAA-TGGTT-TT---ACTGAAAACATGGCT--AGGATCTTGATAACA-GATAA-TT-CAT---TGC--T--C--TGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAAGACTGA-CACGTAG-GGCGTGGGG--TCTGGCGATTGTCCAC--TCAAAGCA--TTAGTGTGAGGCCG-TGTGAACAAAGATACCAT-TACTCGCATTTTGA-ATAC-TAGAGTGCTCTGTTGATGTAAAAAA----------CAACTTTTTTCGACTTTGTGTTATATATCGCC-ACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCAATTTTTCTTTGAAGAATGGGCTA-CC-TATCTGGACAGCCTTATGTGTTAT--TG--CCTGGTGAGGT-ACTTATCACG-GG-G-ATCTCAATTT-C--ATCTAGATG-----ATCCGAA-AAACCAG-AGATGCTAGAGCGTTGACAGAAC-TTTTAAAAGA--TCG------TG-GAT-TA-CGCA-G-CA-TATTTCT--GATGCAACACATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCCGA-ATATTACATGG-AAC-TCTTTCG-T--G-CAGA-ACT-GG-TA-TATGTG-ACAACAGTG--GCAACATTTG-TGG-AGA-C-ACCTTGC-AATTC---------GT---------------------CCTCCA---------CCGGAGAAGAAAAAATTGTAAACTTTTCGGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAAGAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGA-GATCT-CATT------TGCCAAAAGAGATCGT-GAAGGGCTGAACGGATTAAGAGAAGAA--CGAAACTGTCT--GTCCACATGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGC--A--CATT--GT-AAAGCACAG-TA-TTACACCAACAA--AATTCAGGAATTAGGCAATGACT-CGAAAACAA-T-TATTCAAGATCACGAACAT-CT--CATGGGGAAAACCAATGTTTCAGTCTTGCCGTG--CATG-AAAACGAAC-----TTG-----AACT--------------T-GC-----------A-----TC-------------AAAA------------TTCAGAAAATT--AGAAATCATTTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTT-GAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-TGTTTTG-A-AACAATGTTTGGA--GT--GTGTTTTCA--CCAACTATCG-CCGAA--ATTAT----C-AATTTTTTTC--AG-AATCGACGGTG-CCAA-C---GAA-TTTAAAAACATCTA-TTGTA----------CGGCC--AT---TAATT-AAGCT-CAA---GGACTT--G-ACAAGGACGAA-ATTAAAAA-----T-TACA-ACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAAT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAA-CACT-TACCAGCTTC---ACCACGCGCAGTCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|10 : TTT-TT---GG--GAAA---------------AGGAA--T--AGAGATGACCTAT-GT-C--CA-TTCGGTACA--TCTCCATCTATGGATGATTCACTAAGGGTTGATGTCCAATTTGGCG-GTTTTCCTCCAGATATCTTT-AATCCCGTCTCAGCCT------A--G-GGAATCCACAAA---ATTACCATGG-AA-GCACCTCCAAAATCTTGCAAACTAGATCCAATTCCAAACAA-TCTGCTT-A-AGCAATGTTTGGACTCT--CTG-CTTCG----AATTATTA-CTGAA--ACCATAAA-CAGATCATTTTC--AA-ACTCAACAGTG-
gi|11 : TCTAAAGCAAAC-CA-TTTGGCGGAACT-GATGTTTTTT--AAGAATTGGCT-----TGTT---ATAAC---------------A--CCAGGGGAATT-AT-GATTACTTGGTGGATCTGAACTT-CTCACCTAGACA-----ACACACAAGGAA-AA-CGACGTCAG-AAGTTCCTTGAGC-TGCTGGAAGA--CAG------GGAAAC-TAGCGCA-GCCA-TATCTGC--GAACCAACACATATCCGGGAGGCTACAATACTGGAC-GTTCTGTTATAACCAAAACAGG--GACAGTTCC-A-ATTTTGT-TGT-AGC-CCTCTAGTT--G-TGGA-TCC-GGATT-TATGCG-ACAACATAG--GCAAC-TCCACTGGAAGA-C-CATTCGC-AATTG---------GC---------------------GCTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggaagcatctcgattggacaaacaccttgatata
gi|12 : ----------CGACCCAATCGATAATTCAAGCGACAACAGGGTCTA--T-ACAAAGACGAA-TTAGAATA-----A-TGCTGTCCGGTATCCCAAGA---ACTCTTCTTATTTCTAAAGTTCCGGTTCGAAAAactgcttaaacttcaccaagcctcccaggaaagccgaa
gi|13 : gaaatccgaaaaattatcatgaaagcactctcactgcaaatcgtgcgacaccattaccaatgtccaaactagtcatgcaccggagatcgaagtgaagaagctctgcgctccattactactaagctcgaataaagtccagccgtttctatgtcattattacaagctagaaatcgttctagattactcttagttcttagccattagtctctccgttaagaatgatgcatatctcatAAGTT-TCCGGGACACACAGGGTTGTAACCGGAAAGTGTGGAAGAATGGATGCATCCTTAAACAA--ACCGGGT-T--AATGATAATAATC-TCATATCATTGTGAGG--ACTCTTGATCAC-GCGGATCATTGCCATCCATA-CAGG-GT-TTA-CA-ATATCTTACCCGAAACGGTT-CTTGA-TGGAGCA--CGTGAAGCTA-CCCGATACTGATGTCAACA-ACGG--AAACAGAATTGAC--ATCC-GAT-GTCGAAATATGTTCAAACTTGCTACAAATTCACATAACTGA-GGTT--AAAGGTTTAAAAT---CTAGGACCATAAATCACTATGTGC-TTTGAATTGTA-ATC-TCTAGAAATAA--ATCATgtaac
gi|14 : GGAA--CAGTGTTT-TTTGAGGAATGGGC-A-CAATTTTTGGACAGCCTT----GTTAT--TAACCCAGGGGAAGT--TAAATTACT-GGTT-ATCTGAACTT-T--ACCTAG-CA-----ACACACA-GGAC-AAACGACGCCAGGAAGTTCCTTGAGC-TGCTG--AGA--CAG------GG-GAA-TGTCGCA-G-CA-TATTTGC--GAACCAACACATATCCGG--GGGCAC-ATACTGAGC-GTTC--TCATAACCA----AAACGGACAG-TCC-A-ATTTTGCGCGG-TAG-CCTCTAG-TTGG-TGGATCCT-GG-AT-TATGCG-ACAACAAAG--GCAAC-TCCACTGA-AGACC-ATTTCGC-AATTC---------GC---------------------C
gi|15 : ttttAAAAAGCTAATTGTA----------CG-CC--AT---TAATT-AAGCGTCAA---G-ACTT--GTACAAGGACGAA-TTAAAAAAAAAAAT-TACAGACCTGTTTC---AAACTTACCTTTC-TA--TCTAAAA-----ATTGGAAAAAGCGGTGGCAGCTAGACT-TGTA-AAAACACAT-AA-CACT-TACCAGCTTCACGACAACGTGCAATCTGCTCACCGAAATTGTCACTCAACTGAAACGGCTCTAactg
gi|16 : tcagAGGAGCATT-ATA-ATAACG-GGAG-ATTTGAACCTGC--ATCTTGACATTCCAACATGTA-------A-TGACACGATGAGGTTCAAT-AGTATCCTG-------CAGTCTTGCGG-CAT-----GCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----G
gi|17 : agattggccgaagtttttagcagactgcgctacaacagatAAAAGCTG-TTGTA----------CGACC--AT---TAATT-AAAC-AC----------------CAAGGATGAATTTAAAAAA-----TATACAGACCTGTATC---AAGCTCACATTTTGTA--TTTAAAAT----ATTGGGGAAAACGGTGGCAGCTCGACT-TT-AGAAAACATCTAAA-TGCTAAATCATATTTATGACCTTGTGCAA-------ATCA----TGTCA--CA---GGAACGGCTCTAa
gi|18 : TCAACAGTG-CCAT-CCTCG----TTTAAGAATGTCA-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAA-TTTAAGAA-----T-TATCGTCTGGTATC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACAC
gi|19 : AT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCC-G--AG-G-TGAGT----GAT---ATTATCAGTG-AT-GCACCAACAAAGTCCTGCCAATTAGACCCGATAC
gi|2 : GTCCAT-AACGATTACATTCAGTCCA-CAA-ATCGATATAAATGGTT-TTTAAACTGAAA-CA-GGCTTGAGTAGCT-GAATACATGATAA-TT-CATCATTGCCAT--CTGCGAAT-AACCGACCAGATGGGAAGCATTTCATTTCACAACACCAAGAGCTGATCACGTAGAGG-GTGGGGGATCTGGCGATTGTA-AT--TCAAA-CAG-TTAGTGTAAA-CC--TGTGAACAAG-ATAC-ATGTAC-CGCATTTTGACACACCTAGA-TGCTCTGTTGATGTAAAA------------CAACTTTTTTTCGCTTTGTGTTATAATTCGCC-ACCGCCATCAACATCAAACCAA-TCTC-CGGA-TTCAAT--TTTTTTGAA--ATGGGCTAACTATCT---GACAGC-TCATG--TTAT--TG--CTGGTGAGAGT-A--CTTTACG-GGGG-ATC--ATTTT-C--ATCT-GATG-----ATCCG-A-AAAG-A---GATTCTAGAGCGTTTCA-GAAC-TTTTAAAAGAATC-G------TG-GATATA-AGCAAG-CA-TATTTCT--GATGCAAATAATCTTCAT--GGTCAT-ACT-TAGATTGTGT--CGATAAC-A----GGGATGA-AG-CCC-ATATGTTACATGC-AAT-CCTGTTG-T--GGCAGA-CCTTGG-TAATATGTGCACAA--ACGTTGCA-CATT-A-TGG-AGA-C-ACCTTGCCGATTCCGACTTGGCGT---------------------CGTTCAAACAACTTCCCGGAGAGGAAAA---TGTA--CTATTTCGAA-GTTGAC-GAAATTGACATACAGCAATTTAAAAAGAGAC-TG-GATTT---T---TCGAGT--TTATTCACAC---AAAGAAAC-TCC--TGAAAAACTTGCTGTGCGAAA-CT-CAA-A---CCGTTTTACAAAC-TACCATCAA-TTTTCATGCCCACTCAGAAATCAAAGGAGATCATTTTACGACCTACAACACTCCTTGGTTTACAGACGATCT-CATT-----CTGCCAAAAGAGATCGT-GAAGGGTGAAG--GATTATGAGAAGAAAGCCAAACTGTCTAGGTCCACAAGGATA-TT-TTTTCAAGGAG-AA-TGTATGCAGTTTACATAAACTCT-GCTTA--CATTAGGC-AAAGCACACGTAATTACAC----AACCAATTCAGGAATTGGGCAATGACTACG-AAACAA-TATATTCAAGATCACGGACAT-CTCATATAGGGAAACAA--TG-TTTAGTCTTGTCG-GTGCATAGAAAACGACA-----TTG-----AACTGTGATCAAATTTGGT-GA-----------A-----TCTTT-TTATTGG--AAAAAA----------TTCAGAAAATTTAAGAAAT-ATCAATTGTTC--C--TTCAA-ACAGTT--CCTT-TATGGAAAGTGCTCTTCGG--AGACG-AAAATTCGATG-GTATTC-ATTAGAGGTGTTTTGAGC-AGTTACAGTTT-C-C--AAGG-TGAGT----GAATATATCA--AGTG-AT-GCGCCAACAAAGT---GCGCATTAGACCCGATACC--CTAAGCGTTTTG-ATAACAATTGTTGGA--AT--GTG-TTTCAGACCAATTATCGGCCGAATTATTAC-AA-CAAATCTTTTTTCAAGCAATCGACGGTGGCCAAAC---G-A-TTTCAGAAAAGCTA-TTGTAGCGCATTGTACGGTC--AT---TAATT-AAGCG-TAA---GGACTTTAG-ACAAGGACGAA-TTAAAAAA-----T-TACAGACATGTTTC---AAA-TTA---TTTCTA--TCTAAAAT----ATTGGAAAA-GCGGTGGCAGCTA-ACTATG-A-A---CACATAAAACA-T-TACCAGCTT-ACGACCAC-TGCAATCTGCCTACGAAAGTTGTCACTCAACTGAAACGGCTCAAT
gi|20 : -CGCA-A-CA-TATTTGC--TAACCAACGCACATCTGG--AGGCAC-ATTCTGGAC-GTTC--TCATTTCCA----AAACGGACAG-TCC-A-CTTTTGCGTGGTAGC-CCTCTAGTT--G-TAGATCCT-GG-CT-TATGCG-ACAACAAAG--GC--CATT----------------TCGC-AATTC---------GC---------------------TC
gi|21 : gtA-TGCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----GAGATAAactgcttaact
gi|21 : gcTGATCAC-GCGAAACATTGCCAtgacaagattatttccatggtagaagtgacagatcctggtttatcagacggttctggcaatgtttcgcgtgatcatttcgcagt
gi|22 : gcatgcagcaacatgtgaaggaaccaacgcatgtccgtggacatacactagacgtgatcatcaccagagataatgacaagattatttccatggtagaagtgacagatcctggtttatcagacggttcCAACAGTG-CCAT-C---C-T-CTTTTAAGAATTCA-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAA-TTTAAGAA-----T-TATCG-TCTGGTAC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACACtttcgcagt
gi|23 : ACCATGTACTCGCATTTTGA-ACACCTAAAGTGCTCTGTTGATGTAAAAAA-AAAAAACAACAACTTTTTTCGACTTTGTGTTATATTTCGCCCACCGCCATCAAAATCAAAC-AATTCTC-CGGAATTCAAT-TTTCTTTGAAGAAc
gi|27 : -CAAGCTC-CTGTAAGATATAAGGAGATACCTGTGCGGCCAA--ATACACAGTGGTTCACTG
gi|28 : tcgataaa-TACCAGCTTCACGACCACGTGCAATCTGCC
gi|3 : TTCGTGAAGGGAGGGTTTC-GGTCACAGATACCGTTCCACGCCGCACAAGGCG-CGGAACCAAGGCAGGTCGGA
gi|3 : TGCCATCCATATCAGG---ATTACCATAT---CTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGGGCAAAGAAAATTGACGA-TCTAGATCGTCGAAATATATC-AAACTTGCTCAAAATTCACATAATTGA-GGTTCCAAAAGTT-AAAACA-ACTAGGACCAC--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAAAAACATCGATCTAA-TGGTT-TTA--ACTAAAA-CATGGCT--ATGATCT-GAT-ACA-AATAA-TTCCAT---TGCA-T--C--TGAATTTAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAA-GGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAGATTAGTGTGAGGCC--TGTGAACAAAGATACCATGTACTCGCGTTTTGA-ACACCTAGAGTGCTATGTTGGTGTAAAAAA-AAACC----CAACTTTTTTCGTCTTTGTGTTATATATCGCCCACCGCCGTCACAATCAAAC-AA-TCTC-CGGAATTCAAT-TTTCTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|3 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngATTTCT--GATGCAACTTATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCC-A-ATATTGCATGG-AACTCCTTTCG-T--GGCAGAACCT-GG-TA-TATGTG-ACAACAGTG--GCAACATTAG-TGG-AGA-CCACCTTGC-GATTC---------GTACTTTGCTGTCTTTCAACAAACCTCAA---------CCGGAGAGGAAAAA--TGTAA-CT-TTCCGGAAATGGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CGACAATA---CTGTTTTACAAAC-TACCGTCAATTTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGACGATCTTCATT-----CTGCCAAAAGAGATCGTCGAAGGGCTGAACGGATTATGAGAAGAA--CCAAACTGTCT--GTCCACAAGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGCT-A--CATT--TT-AAAGCACAA-TA-TTACACCAACAA--AATTGAGGAATTAGGCAATGACT-CG-AAACAA-T-TATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|4 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnna---------------------CCTCC----------CAGGAAGCGAAAAAC-TGTGA-CCATTCCGAAAGCTTTCCAGTATTGATAT-T-GCTCTTTT------TACCTGTGATCTAAATGAATCGAGTGCTCTCC-GCACCCTAGAGCGGTCTCTGCTGAA---CTTACTG-AC---AGTTACAATAGGACCCT----CAAACAGACCATCGA-TAAACAAGCTC-CTGTAAGATCTAAGGAGATAACTGTGCGGCCAA--ATACACAGTGGTTCACTGATGAGTTGC--TAGAG-CAGCCAAAAGAAAGCGTCGACAAACAGAGCGAACAATGAGACGAA--CAAAACTGAGT--GTCCATAGAGAAA-TT-TT--TAAGGAA-AATTGTTCTAAAGTGACC-AAA-TCTTGCT-A--AAAT--GC-AA-GAAGAT-TA-TTATGTTGGCAA--A-TTCAAGAACTTGGAAACGATTAC---AACAAAT-TATACAA-ATCATTAATAGACT--TATGGGAATAAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATGATGACTTGCCAAAAATT--------------TTGC-----------GATT--TCTTT-TT---GGGAAAAA------------TT--AAAAATT--AGAGACGACCTAT-GT-C--CACCTGGT-AC-GTCTCCAT-CTATGGATGATTCATTACGAGCTGATGTCCAGTTTGCCGTGTGTTCCTCTAGATGTCTTT-AATCCTGTGTCAGCCA-C-GGAA--A-TCCGA----AAA---ATTATCA-TG-AAAGCACCTCCAAAACCTTGCGAACTAGATCCAATTCCAACTAA-TCTGCTT-A-AGCAATGTTTGGA--CTCTGTG-CTTC----CTATTATTA-CTGAA--ATCAT-AAACAGATCATTATC--AA-ACTCAACAGTG-CCAT-CCTCG----TTTAAGAATGCAA-TTGTT----------CGACC--AC---TTATC-AAGCGACAA---GGGCTA--G-ACAAAGACGAA-TTTAAGAA-----T-TATCGTCCGGTATC---CAATTTACCGTTCTTA--TCT-AAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-
gi|5 : gTCAAAGGTGACTACCATCCACCCAG--ACTGTCCGTGGT--AC---CCATCTGAACTTCGAGCTGCCAAAAGGGAGCGGCGAAGGGCGGAGAGGCAGATGCGTAGGA--CTCGTTTGACT--GTCCATCAGGAAATTT-TT--C--GTAGTCAATGTGCCCAGGTATCA-AAA--CTTGCT-GTTCAGT--GTAAAAGGAC-G-TA-CTATTCAAGCAA--AATTGAAGAAGTGGGTAAAGATCA-G-AAACAG-C-TATca
gi|6 : atcaacttacttgggaggccataccctagatgttgtgatagcgaggaattgcagctccatcgttaaaggtgaactatatgtataaaagacccagcactgcatgataaaaatggtcaccctgctggtgatcatctagcaatcttctcaagactttcaattttcaatatcaaaatcaacaagagagcgtaaaattgttagattcagaaaattacgtgatattgttattagtgaccttaataacattcgctcttctgtggaggtgcaaacttgtgaacctttcgtaatagaatcggtacaattttacaacataacacttaaaaacatgctagatgaaattgcacctgtacagTGTGTAC-ATTGAACTGTAGATTTACACGGAATAA--AACATTGTCCATCAATGAATTCATCAAGTCTAACAATGTCGACCTCA-TGGTGATG---ACAGAAA-CATGGCT--TGGTTCT-GA-GATA-GATAAATC-CAT---T-C--TAGC--CGTACTAAC--CCCAGAGGACTACATTGTCATC-CAGAA-ACCAAGA-TTAA-CACGTAA-AG-GTGGTGG-TCTG-CGGTCGTCCACAGT-AATACGA-TCAGCGTGAAGCCGATACG--CCAGGACGTTTCATACTCTCATTTTGA-ACATTTAGAGTGTTCTGTTAGCGTCAAAAATGAA------CA----TATCCGTCTCTGTGTCATTTATCGCCCACCACCATCTAAAGCAAAC-CA-TTTT-CGGAACTCG-TGTTTTTTTGAGGAATGGGC-A-CAATTTTTGGACAGCCTT----GTTATAACA--CCAGGGGAAGTTATA-ATTACT-GGTG-ATCTGAACTTTC--ACATAGACA-----ACACACA-GGAC-AA-CGACGCCAGGAAGTTCCTTGAGC-TGCTGGAAGA--CAG------GG-GAT-GT-CGCA-G-CA-TATTTGC--GAACCAACGCATATCCGG--GGTCAC-ATACTGGAC-GTTC--TCACAACCA----
gi|7 : -CAAGCTC-CTGTAAGATCTAAGGAGATAACT--GCGGCAAA--ATACACAGTGGTTCACTGATGAATTGCTAG-----CAGCCAAAAGAAAGCGTCGACAAACAGAGTGAAAAATGAGACGAA--TAAAACAGAGT--GTCCATA--GAAA-TTGTT--C------------TA---AAGTAACA-AAAATCTTGCT-A--AAAT--GC-AAGAAAGAT-TA-TTATGTTGGCAA--AATTCAAAACCTTGGAAACGATTAC--AAACAA-T-TATACAAAATCATTAATAGGCT--TATGGGAAATAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATG-----ATG-----AGCT--------------T-GCCAAAAAATTTTGCGATTTCTTT-TTA--GG--AAAAATTTTTTTTTTTTTT------TT--AGAGATGACCTAT-GT-CCAC--GTGGT-AC-GTCTCCA--CTATGGATGATTCACTACGAGCTGATGTTCAGTTTGTCG-GTTTTCCTCTAGATATCTTT-AACCCTGTGTCAGCCT-C-GGAA--A-TCCGC----AAA---ATTATCA-TGAAA-GCACCTCCAAAATCTTGCGAACTAGATCCAATTCCAACAAA-TCTGCTT-A-AGCAATGTTTGGA--CT--aaa
gi|8 : aa-----TCTTTATT---GG--AAAAA-----------TTCAGAAAATT--AGAAATCATCTAT-GT-T--C--CTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCACACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT----TCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-CGTTTTTGA-AACAATGTTTGGA--GT--GTG-TTTCA--CCAATTATCG-TCGAA--ATTATCAA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAA-C---G-AATTTCAAAAAAG-TA-TTGTA----------CG--C--AT---TAATT-AAGCGTCAA---GGACTT--G-ACA-GGACGAA-TTAAAAAA-----T-TACAGAC-TGTTTC---AAACTTACCTTTTCTA--TCTACAAT----ATTGGAAAAAGCGGTGGAAACTAGACT-TG-A-AAAACACATAAA-CACT-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTTACTCAACTGAAACGGCTCTA
gi|9 : taat-----TCTTTATT---GG--AAAAA-----------TTCAGAAAATT--AGAAATCATCTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAATGTGCTCTTTGAGCAGACGGAAAATTCGATG-GTATTCCATTAGAGATGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATAAGACCCGATACCCACTAA-CGTTTTG-A-AACAATGTTTGAA--GT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTATTAA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAA-C---G-AATTTCAAAAAAGCTA-TTGTA----------CGGCC--AT---TGATT-AAGCGTCAA---GGACTT--G-ACAAGGACGAA-TTAAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAATACGTAAA-CACT-TACCAGCTTCACGACCACGTGC---------ACCGAAA-TGTCACTC-ACTGAAACGGCTCTA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): AAAGACGAAAACTCTGACATCTCAACCGAAAGCTTTACAGTATTGAGATATTGCTATAGATTTTACGAAGTGATCTATAATGGAGGTCAAGTGCTCTCCGCTACCACTAGAGCGAGTCTCCTGATGACACTT
Unaligned ( gi|25 ): AGGGTTTTCCTCTAGATATCTTTATTCCTGAGTCAGCCTCGGAAATCCACAAACTTATCATAAAAGCACCTCCAAAATCTTGCGAACTAGA
Unaligned ( gi|26 ): ACGAAAACATCCACCAAAGACTGCATTTCAAATTAACCGAAAAGTACTACTTATATACTAGTACTTTAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 1 1 1 1 1 1 1 11 2222 1 1 11 1 2222 1 111 1 1 1 11 11 1 1 11 111 1 1111 22 11 1 11 1 1 222 1 11 1 22 1 1 1 33333333333333 11 1 1 111 1 1 1 11 11 11 22 5555555555 1 1 222222 444444444444444444 11111 1111 111111 1111111111 1 111111 2222 1 111 11111 11111 111111 2 333333 77777777777777777777777777777777777777777777777 222 11 1 1 2222222 11 1 111 11111 111 1 1 1 3333333333 1 11 1111 22 11 1 11 1 222222222222222222222222222222222222222222222222222222 1111111 222222222222 11 11111 22222222222 1111 1 111 2 3333333333333 1111111111 1 11111
lowQualScore : 5 5 5 5 5 1 5 5 5 22 5 1 1 5 88 1 4444 5 5 77 1 3 7 7 6666 6 2 000 3 3 3 88 44 3 3 88 333 7 6 6 1 7 3 6 2222 00 88 0 3 55 3 3 33 2 3 3 3 99 0 0 777 0 3 33 0 00 0 0 0 33333333333333 3 33 0 0 0 111 0 0 0 22 2 2 33 2 6 66 2 55 3 2 3 3 0 8 3 0 1111111111 0 1 1 0 6 6 6 2 11 5 4 333333 1 99 444444444444444444 4 66666 77 888 5555 3 777777 5 8888888888 3 1 44 6 1 2 99 3 999999 6 0000 5 5 0 333 0 1 777 1 4 1 4 8888 0 9999 66 4 99 5 00000 1 66666 5 88 1 3 777777 1 2 5 9999 0 5 33 77 1 7 222222 6 777 1 77 77777777777777777777777777777777777777777777777 0 777 33 9 3 2 0 3 33 2 0 6666666 33 0 777 0 9 2 3 3 88888 3 3 777 3 0 0 3 1 6 22 1 1 6 0 0 1 77 1 11 0 6 3 6666666666 1 6 3 5 22 99 1 1 99 6 1 6 6 99 7 8888 88 1 77 0 9999 1 99 6 1 1 77 6 2 00 99 1 1 2 9999 666 1 6 2 00 33 6 9 2 0 00 0 1 333333333333333333333333333333333333333333333333333333 8888888 5 44 000000000000 66 888 1 5 4 00 99999 4 8888 1 0 4 0 22 0 55 5 0 5 0 0 88888888888 0000 9999 5 0 0 0 1 0 6 5 0 1 77 5 666 6 99 6 99 6 99 6 5 4444444444444 5 4 4 7777777777 5 55 777 0 4 1 777 777 4 55 00000 4 0 3 1 777 4 2 3 55 8888 0 1 4 555 1 6 5 1 1 3
lowQualScore : . . . . . . . . . .. . . . . .. . .... . . .. . . . . .... . . ... . . . .. .. . . .. ... . . . . . . . .... .. .. . . .. . . .. . . . . .. . . ... . . .. . .. . . . .............. . .. . . . ... . . . .. . . .. . . .. . .. . . . . . . . . .......... . . . . . . . . .. . . ...... . .. .................. . ..... .. ... .... . ...... . .......... . . .. . . . .. . ...... . .... . . . ... . . ... . . . . .... . .... .. . .. . ..... . ..... . .. . . ...... . . . .... . . .. .. . . ...... . ... . .. ............................................... . ... .. . . . . . .. . . ....... .. . ... . . . . . ..... . . ... . . . . . . .. . . . . . . .. . .. . . . .......... . . . . .. .. . . .. . . . . .. . .... .. . .. . .... . .. . . . .. . . .. .. . . . .... ... . . . .. .. . . . . .. . . ...................................................... ....... . .. ............ .. ... . . . .. ..... . .... . . . . .. . .. . . . . . ........... .... .... . . . . . . . . . . .. . ... . .. . .. . .. . . ............. . . . .......... . .. ... . . . ... ... . .. ..... . . . . ... . . . .. .... . . . ... . . . . . .
lowQualScore : 0 5 0 0 5 0 5 0 0 00 0 0 0 5 00 0 5555 5 5 55 0 3 3 3 3333 7 0 000 3 3 3 33 77 3 3 33 000 3 7 7 0 3 3 7 0000 77 33 0 2 88 2 2 88 5 2 2 2 88 0 0 555 0 2 88 0 55 0 0 0 22222222222222 2 88 0 8 0 000 0 0 0 55 5 5 88 5 5 55 5 00 2 5 2 2 8 0 2 8 8888888888 8 0 4 0 7 7 7 3 66 0 0 888888 0 44 444444444444444444 6 77777 77 333 2222 5 333333 2 3333333333 7 5 55 7 0 0 22 2 222222 7 1111 0 0 0 111 9 0 888 0 4 0 4 1111 1 4444 11 0 77 7 11111 0 11111 7 77 7 0 444444 4 9 7 3333 4 7 44 99 4 1 000000 7 555 0 33 00000000000000000000000000000000000000000000000 2 000 22 8 2 5 0 2 55 5 0 0000000 88 0 555 8 2 5 2 2 55555 2 2 555 2 0 0 3 0 7 00 0 0 6 4 4 0 99 0 44 4 6 7 2222222222 0 7 7 2 00 22 0 0 22 0 0 7 7 22 3 2222 88 0 77 8 3333 0 22 7 7 0 77 7 2 00 22 0 0 2 0000 888 0 5 5 00 88 5 8 5 0 55 0 0 666666666666666666666666666666666666666666666666666666 1111111 7 55 888888888888 99 888 1 9 2 66 99999 4 0000 9 8 8 8 11 8 99 0 8 0 5 8 11111111111 6666 8888 6 0 8 8 0 8 6 7 7 3 00 7 777 7 22 7 22 7 22 7 0 1111111111111 0 4 4 5555555555 3 55 000 3 0 0 000 999 0 44 00000 0 8 7 4 000 8 1 9 55 5555 1 7 4 333 0 7 7 4 5 2
consensus : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTTATG-GTTAT--TA--CCGGGGGAAGT-A-TAATTACN-GGTG-ATCTGAACTT-C--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GAT-TA-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNG-T--G-CGGATCCT-GG-TN-TATGCG-ACAACANNG--GCAACATT---CG-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTGCATT-----CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT----GG-AAAAATTCAGAAAA-----------TT--A---GAGATNACCTAT--GT--C--C-TTCG-A-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-ATGCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NTGTG-TTTCA--CCAATTATCG-CCGAA--ATTAT-AACAAATCTTTTTC--AG-AATCGACGGTG-CCA---N-C---GA-TTTCA-AAAA-AGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGNCAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
Reference ( family-4004 ) : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTTATG-GTTAT--TA--CCGGGGGAAGT-A-TAATTACN-GGTG-ATCTGAACTT-C--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GAT-TA-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNG-T--G-CGGA-CCT-GG-TN-TATGCG-ACAACAANG--GCAACATT---CG-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTGCATT-----CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT----GG-AAAAATTCAGAAAA-----------TT--A---GAGATNACCTAT--GT--C--C-TTCG-A-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-ATGCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NTGTG-TTTCA--CCAATTATCG-CCGAA--ATTAT-AACAAATCTTTTTC--AG-AATCGACGGTG-CCA---N-C---GA-TTTCA-AAAA-AGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGACAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|1 : TTCGTGAAGG-AGGGTTTCAGGTCACAGATACCGTTCCA-GCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCAGAGAC-CA-AGGGTT-TGACCGGAATTTGTGGAA-ATTTGATGCATCCT-AAACAACTACGGGGTGTAAAATGATAATAATCATCAT-TCATTGTGAGAGCACTATTGATCACCGCGG-TCAGGGCCATCCATATCAGGCGTATTACCACATATTCTA-CCGAAACGGTTTCCTGAATGAGCCAACCGTGAAGCT-TCCCGATACGAAT-TCAACACACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCCTCAAATTC-CATAATTGATGGTTCCAAAA---TAAAACACACTAGGACCAT--ATCCCTGTGTGCGTTTGA-TTGT-GATCTTCTAGAA-TAATCATCATTGTCCATCAACGAT-ACATCC-GTCTAACA-CATCGATCTAA-TGGTT-TT---ACTGAAAACATGGCT--AGGATCTTGATAACA-GATAA-TT-CAT---TGC--T--C--TGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAAGACTGA-CACGTAG-GGCGTGGGG--TCTGGCGATTGTCCAC--TCAAAGCA--TTAGTGTGAGGCCG-TGTGAACAAAGATACCAT-TACTCGCATTTTGA-ATAC-TAGAGTGCTCTGTTGATGTAAAAAA----------CAACTTTTTTCGACTTTGTGTTATATATCGCC-ACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCAATTTTTCTTTGAAGAATGGGCTA-CC-TATCTGGACAGCCTTATGTGTTAT--TG--CCTGGTGAGGT-ACTTATCACG-GG-G-ATCTCAATTT-C--ATCTAGATG-----ATCCGAA-AAACCAG-AGATGCTAGAGCGTTGACAGAAC-TTTTAAAAGA--TCG------TG-GAT-TA-CGCA-G-CA-TATTTCT--GATGCAACACATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCCGA-A---TATTAC----ATGG-AAC-TCTTTCG-T--G-CAGA-ACT-GG-TA-TATGTG-ACAACAGTG--GCAACATT---TG-TGG-AGA-C-ACCTTGC-AATTC---------GT---------------------CCTCCA---------CCGGAGAAGAAAAAATTGTAAACTTTTCGGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAAGAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGA-GATCT-CATT------TGCCAAAAGAGATCGT-GAAGGGCTGAACGGATTAAGAGAAGAA--CGAAACTGTCT--GTCCACATGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGC--A--CATT--GT-AAAGCACAG-TA-TTACACCAACAA--AATTCAGGAATTAGGCAATGACT-CGAAAACAA-T-TATTCAAGATCACGAACAT-CT--CATGGGGAAAACCAATGTTTCAGTCTTGCCGTG--CATG-AAAACGAAC-----TTG-----AACT--------------T-GC-----------A-----TC--------------AAAATTCAGAAAA-----------TT--A---GAAATCATTTAT--GT--T--C-TTCA-A-ACAGTTTCCCTTCTATGGAAAGTGCTCTT-GAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAT---ATCATCAGTG-ATGCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-TGTTTTG-A-AACAATGTTTGGA--GTGTGTTTTCA--CCAACTATCG-CCGAA--ATTAT---C-AATTTTTTTC--AG-AATCGACGGTG-CCA---A-C---GA-ATTTA-AAAACATCTA-TTGTA----------CGGCC--AT---TAATT-AAGCT-CAA---GGACTT--G-ACAAGGACGAAAT-TAAAAA-----T-TACA-ACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAAT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTC---ACCACGCGCAGTCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|10 : TTT-TT----GG-GAAAA----GGAA-------------T--A---GAGATGACCTAT--GT--C--CATTCG-GTACA--TCTCCATCTATGGATGATTCACTAAGGGTTGATGTCCAATTTGGCG-GTTTTCCTCCAGATATCTTT-AATCCCGTCTCAGCCT------A--G-GGAATCCACAAA---ATTACCATGG-AAGCACCTCCAAAATCTTGCAAACTAGATCCAATTCCAAACAA-TCTGCTT-A-AGCAATGTTTGGACTCTCTG-CTTCG----AATTATTA-CTGAA--ACCATAAACAGATCATTTTC--AA-ACTCAACAGTG-
gi|11 : TCTAAAGCAAAC-CA-TTTGGCGGAACT-GATGTTTTTT--AAGAATTGGCT-----TGTT---ATAAC---------------A--CCAGGGGAATT-A-TGATTACTTGGTGGATCTGAACTT-CTCACCTAGACA-----ACACACAAGGAA-AA-CGACGTCAG-AAGTTCCTTGAGC-TGCTGGAAGA--CAG------GGAAAC-TAGCGCA-GCCA-TATCTGC--GAACCAACACATATCCGGGAGGCTACAATACTGGAC-GTTCTGTTATAACCAAAACAGG--GACAGTTCC-A-A---TTTTGT-----TGT-AGC-CCTCTAGTT--G-TGGA-TCC-GGATT-TATGCG-ACAACATAG--GCAAC-TC---CACTGGAAGA-C-CATTCGC-AATTG---------GC---------------------GCTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggaagcatctcgattggacaaacaccttgatata
gi|12 : ----------CGACCCAATCGATAATTCAAGCGACAACAGGGTCTA--T-ACAAAGACGAATT-AGAATA-----A-TGCTGTCCGGTATCCCAAGA---ACTCTTCTTATTTCTAAAGTTCCGGTTCGAAAAactgcttaaacttcaccaagcctcccaggaaagccgaa
gi|13 : gaaatccgaaaaattatcatgaaagcactctcactgcaaatcgtgcgacaccattaccaatgtccaaactagtcatgcaccggagatcgaagtgaagaagctctgcgctccattactactaagctcgaataaagtccagccgtttctatgtcattattacaagctagaaatcgttctagattactcttagttcttagccattagtctctccgttaagaatgatgcatatctcatAAGTT-TCCGGGACACACAGGGTTGTAACCGGAAAGTGTGGAAGAATGGATGCATCCTTAAACAA--ACCGGGT-T--AATGATAATAATC-TCATATCATTGTGAGG--ACTCTTGATCAC-GCGGATCATTGCCATCCATA-CAGG-GT-TTA-CA-ATATCTTACCCGAAACGGTT-CTTGA-TGGAGCA--CGTGAAGCTA-CCCGATACTGATGTCAACA-ACGG--AAACAGAATTGAC--ATCC-GAT-GTCGAAATATGTTCAAACTTGCTACAAATTCACATAACTGA-GGTT--AAAGGTTTAAAAT---CTAGGACCATAAATCACTATGTGC-TTTGAATTGTA-ATC-TCTAGAAATAA--ATCATgtaac
gi|14 : GGAA--CAGTGTTT-TTTGAGGAATGGGC-A-CAATTTTTGGACAGCCTT----GTTAT--TAACCCAGGGGAAGT-T-AAATTACT-GGTT-ATCTGAACTT-T--ACCTAG-CA-----ACACACA-GGAC-AAACGACGCCAGGAAGTTCCTTGAGC-TGCTG--AGA--CAG------GG-GAA-TGTCGCA-G-CA-TATTTGC--GAACCAACACATATCCGG--GGGCAC-ATACTGAGC-GTTC--TCATAACCA----AAACGGACAG-TCC-A-A---TTTTGC----GCGG-TAG-CCTCTAG-TTGG-TGGATCCT-GG-AT-TATGCG-ACAACAAAG--GCAAC-TC---CACTGA-AGACC-ATTTCGC-AATTC---------GC---------------------C
gi|15 : ttttTCAGAAAA-AGCTAATTGTA----------CG-CC--AT---TAATT-AAGCGTCAA---G-ACTT--GTACAAGGACGAATT-AAAAAAAAAAAT-TACAGACCTGTTTC---AAACTTACCTTTC-TA--TCTAAAA-----ATTGGAAAAAGCGGTGGCAGCTAGACT-TGTA-AAAACACAT-AACAC-T-TACCAGCTTCACGACAACGTGCAATCTGCTCACCGAAATTGTCACTCAACTGAAACGGCTCTAactg
gi|16 : GGAGCATT-A-TAATAACG-GGAG-ATTTGAACCTGC--ATCTTGACATTCCAACATGTA-------A-TGACACGATGAGGTTCAAT-AGTATCCTG-------CAGTCTTGCGG-CAT-----GCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----G
gi|17 : agattggccgaagtttttagcagactgcgctacaacagataAAA-AGCTG-TTGTA----------CGACC--AT---TAATT-AAAC----------AC-------CAAGGATGAATTTAAAAAA-----TATACAGACCTGTATC---AAGCTCACATTTTGTA--TTTAAAAT----ATTGGGGAAAACGGTGGCAGCTCGACT-TT-AGAAAACATCTAAATGC-TAAATCATATTTATGACCTTGTGCAA-------ATCA----TGTCA--CA---GGAACGGCTCTAa
gi|18 : TCAACAGTG-CCA---T-CCTCG---TTTA-AGAA-TGTCA-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAATT-TAAGAA-----T-TATCGTCTGGTATC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACAC
gi|19 : AT--GT--T--C-TTCA-A-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCC-G--AG-G-TGAGT----GAT---ATTATCAGTG-ATGCACCAACAAAGTCCTGCCAATTAGACCCGATAC
gi|2 : GTCCAT-AACGATTACATTCAGTCCA-CAA-ATCGATATAAATGGTT-TTTAAACTGAAA-CA-GGCTTGAGTAGCT-GAATACATGATAA-TT-CATCATTGCCAT--CTGCGAAT-AACCGACCAGATGGGAAGCATTTCATTTCACAACACCAAGAGCTGATCACGTAGAGG-GTGGGGGATCTGGCGATTGTA-AT--TCAAA-CAG-TTAGTGTAAA-CC--TGTGAACAAG-ATAC-ATGTAC-CGCATTTTGACACACCTAGA-TGCTCTGTTGATGTAAAA------------CAACTTTTTTTCGCTTTGTGTTATAATTCGCC-ACCGCCATCAACATCAAACCAA-TCTC-CGGA-TTCAAT--TTTTTTGAA--ATGGGCTAACTATCT---GACAGC-TCATG--TTAT--TG--CTGGTGAGAGT-ACT--TTACG-GGGG-ATC--ATTTT-C--ATCT-GATG-----ATCCG-A-AAAG-A---GATTCTAGAGCGTTTCA-GAAC-TTTTAAAAGAATC-G------TG-GATATA-AGCAAG-CA-TATTTCT--GATGCAAATAATCTTCAT--GGTCAT-ACT-TAGATTGTGT--CGATAAC-A----GGGATGA-AG-CCC-ATA---TGTTAC----ATGC-AAT-CCTGTTG-T--GGCAGA-CCTTGG-TAATATGTGCACAA--ACGTTGCA-CATT----A-TGG-AGA-C-ACCTTGCCGATTCCGACTTGGCGT---------------------CGTTCAAACAACTTCCCGGAGAGGAAAA---TGTA--CTATTTCGAA-GTTGAC-GAAATTGACATACAGCAATTTAAAAAGAGAC-TG-GATTT---T---TCGAGT--TTATTCACAC---AAAGAAAC-TCC--TGAAAAACTTGCTGTGCGAAA-CT-CAA-A---CCGTTTTACAAAC-TACCATCAA-TTTTCATGCCCACTCAGAAATCAAAGGAGATCATTTTACGACCTACAACACTCCTTGGTTTACAGACGATCT-CATT-----CTGCCAAAAGAGATCGT-GAAGGGTGAAG--GATTATGAGAAGAAAGCCAAACTGTCTAGGTCCACAAGGATA-TT-TTTTCAAGGAG-AA-TGTATGCAGTTTACATAAACTCT-GCTTA--CATTAGGC-AAAGCACACGTAATTACAC----AACCAATTCAGGAATTGGGCAATGACTACG-AAACAA-TATATTCAAGATCACGGACAT-CTCATATAGGGAAACAA--TG-TTTAGTCTTGTCG-GTGCATAGAAAACGACA-----TTG-----AACTGTGATCAAATTTGGT-GA-----------A-----TCTTT-TTATTGGA-AAAAATTCAGAAAA-----------TTTAA---GAAAT-ATCAATT-GTT-C--C-TTCA-A-ACAGTT--CCTT-TATGGAAAGTGCTCTTCGG--AGACG-AAAATTCGATG-GTATTC-ATTAGAGGTGTTTTGAGC-AGTTACAGTTT-C-C--AAGG-TGAGT----GAATATATCA--AGTG-ATGCGCCAACAAAGT---GCGCATTAGACCCGATACC--CTAAGCGTTTTG-ATAACAATTGTTGGA--ATGTG-TTTCAGACCAATTATCGGCCGAATTATTAC-AACAAATCTTTTTTCAAGCAATCGACGGTGGCCA---AAC---GA-TTTCA-GAAA-AGCTA-TTGTAGCGCATTGTACGGTC--AT---TAATT-AAGCG-TAA---GGACTTTAG-ACAAGGACGAATT-AAAAAA-----T-TACAGACATGTTTC---AAA-TTA---TTTCTA--TCTAAAAT----ATTGG-AAAAGCGGTGGCAGCTA-ACTATG-----AACACATAAA-ACAT-TACCAGCTT-ACGACCAC-TGCAATCTGCCTACGAAAGTTGTCACTCAACTGAAACGGCTCAAT
gi|20 : -CGCA-A-CA-TATTTGC--TAACCAACGCACATCTGG--AGGCAC-ATTCTGGAC-GTTC--TCATTTCCA----AAACGGACAG-TCC-A-C---TTTTGC----GTGGTAGC-CCTCTAGTT--G-TAGATCCT-GG-CT-TATGCG-ACAACAAAG--GC--CATT-------------------TCGC-AATTC---------GC---------------------TC
gi|21 : gtA-TGCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----GAGATAATGA---C-A-AGATTATTTCCATGGTAG-AA--------G-T--GACAGATCCT-GG-TT-TATCAG-ACGGTTCTG--GCAATGTTTCGCG-TGactgcttaact
gi|21 : gcTGATCAC-GCGAAACATTGCCAatcatttcgcagt
gi|22 : gcatgcagcaacatgtgaaggaaccaacgcatgtccgtggacatacactagacgtgatcatcaccagagataatgacaagattatttccatggtagaagtgacagatcctggtttatcagacggttcCAACAGTG-CCA---T-C---CT-CTTTT-AAGA-ATTCA-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAATT-TAAGAA-----T-TATCG-TCTGGTAC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACACtttcgcagt
gi|23 : ACCATGTACTCGCATTTTGA-ACACCTAAAGTGCTCTGTTGATGTAAAAAA-AAAAAACAACAACTTTTTTCGACTTTGTGTTATATTTCGCCCACCGCCATCAAAATCAAAC-AATTCTC-CGGAATTCAAT-TTTCTTTGAAGAAc
gi|27 : -CAAGCTC-CTGTAAGATATAAGGAGATACCTGTGCGGCCAA--ATACACAGTGGTTCACTG
gi|28 : tcgataaa-TACCAGCTTCACGACCACGTGCAATCTGCC
gi|3 : TTCGTGAAGGGAGGGTTTC-GGTCACAGATACCGTTCCACGCCGCACAAGGCG-CGGAACCAAGGCAGGTCGGA
gi|3 : TGCCATCCATATCAGG---ATTACCATAT---CTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGGGCAAAGAAAATTGACGA-TCTAGATCGTCGAAATATATC-AAACTTGCTCAAAATTCACATAATTGA-GGTTCCAAAAGTT-AAAACA-ACTAGGACCAC--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAAAAACATCGATCTAA-TGGTT-TTA--ACTAAAA-CATGGCT--ATGATCT-GAT-ACA-AATAA-TTCCAT---TGCA-T--C--TGAATTTAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAA-GGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAGATTAGTGTGAGGCC--TGTGAACAAAGATACCATGTACTCGCGTTTTGA-ACACCTAGAGTGCTATGTTGGTGTAAAAAA-AAACC----CAACTTTTTTCGTCTTTGTGTTATATATCGCCCACCGCCGTCACAATCAAAC-AA-TCTC-CGGAATTCAAT-TTTCTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|3 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngATTTCT--GATGCAACTTATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCC-A-A---TATTGC----ATGG-AACTCCTTTCG-T--GGCAGAACCT-GG-TA-TATGTG-ACAACAGTG--GCAACATT---AG-TGG-AGA-CCACCTTGC-GATTC---------GTACTTTGCTGTCTTTCAACAAACCTCAA---------CCGGAGAGGAAAAA--TGTAA-CT-TTCCGGAAATGGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CGACAATA---CTGTTTTACAAAC-TACCGTCAATTTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGACGATCTTCATT-----CTGCCAAAAGAGATCGTCGAAGGGCTGAACGGATTATGAGAAGAA--CCAAACTGTCT--GTCCACAAGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGCT-A--CATT--TT-AAAGCACAA-TA-TTACACCAACAA--AATTGAGGAATTAGGCAATGACT-CG-AAACAA-T-TATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|4 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnna---------------------CCTCC----------CAGGAAGCGAAAAAC-TGTGA-CCATTCCGAAAGCTTTCCAGTATTGATAT-T-GCTCTTTT------TACCTGTGATCTAAATGAATCGAGTGCTCTCC-GCACCCTAGAGCGGTCTCTGCTGAA---CTTACTG-AC---AGTTACAATAGGACCCT----CAAACAGACCATCGA-TAAACAAGCTC-CTGTAAGATCTAAGGAGATAACTGTGCGGCCAA--ATACACAGTGGTTCACTGATGAGTTGC--TAGAG-CAGCCAAAAGAAAGCGTCGACAAACAGAGCGAACAATGAGACGAA--CAAAACTGAGT--GTCCATAGAGAAA-TT-TT--TAAGGAA-AATTGTTCTAAAGTGACC-AAA-TCTTGCT-A--AAAT--GC-AA-GAAGAT-TA-TTATGTTGGCAA--A-TTCAAGAACTTGGAAACGATTAC---AACAAAT-TATACAA-ATCATTAATAGACT--TATGGGAATAAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATGATGACTTGCCAAAAATT--------------TTGC-----------GATT--TCTTT-TT----GGGAAAAATT--AAAAA-----------TT--A---GAGACGACCTAT--GT--CCAC-CTGG-T-AC-GTCTCCA-TCTATGGATGATTCATTACGAGCTGATGTCCAGTTTGCCGTGTGTTCCTCTAGATGTCTTT-AATCCTGTGTCAGCCA-C-GGAA--A-TCCGA----AAA---ATTATCA-TGAAAGCACCTCCAAAACCTTGCGAACTAGATCCAATTCCAACTAA-TCTGCTT-A-AGCAATGTTTGGACTCTGTG-CTT----CCTATTATTA-CTGAA--ATCATAAACAGATCATTATC--AA-ACTCAACAGTG-CCATCCT-C---G---TTTA-AGAA-TGCAA-TTGTT----------CGACC--AC---TTATC-AAGCGACAA---GGGCTA--G-ACAAAGACGAATT-TAAGAA-----T-TATCGTCCGGTATC---CAATTTACCGTTCTTA--TCT-AAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-
gi|5 : gAGATTCAGAAAA-----------TT--ACGTGATATTG-TTATTAGTGAC--C-TTAATA-ACATTCGCTCTTCTGTGG-AGGTGCca
gi|5 : atcaacttacttgggaggccataccctagatgttgtgatagcgaggaattgcagctccatcgttaaaggtgaactatatgtataaaagacccagcactgcatgataaaaatggtcaccctgctggtgatcatctagcaatcttctcaagactttcaattttcaatatcaaaatcaacaagagagcgtaaaattgttTCAAAGGTGACTACCATCCACCCAG--ACTGTCCGTGGT--AC---CCATCTGAACTTCGAGCTGCCAAAAGGGAGCGGCGAAGGGCGGAGAGGCAGATGCGTAGGA--CTCGTTTGACT--GTCCATCAGGAAATTT-TT--C--GTAGTCAATGTGCCCAGGTATCA-AAA--CTTGCT-GTTCAGT--GTAAAAGGAC-G-TA-CTATTCAAGCAA--AATTGAAGAAGTGGGTAAAGATCA-G-AAACAG-C-TATaaacttgtgaacctttcgtaatagaatcggtacaattttacaacataacacttaaaaacatgctagatgaaattgcacctgtacagtcaaaggtgactaccatccacccagactgtccgtggtacccatctgaacttcgagctgccaaaagggagcggcgaagggcggagaggcagatgcgtaggactcgtttgactgtccatcaggaaatttttcgtagtcaatgtgcccaggtatcaaaacttgctgttcagtgtaaaaggacgtactattcaagcaaaattgaagaagtgggtaaagatcagaaacagctat
gi|6 : atcaacttacttgggaggccataccctagatgttgtgatagcgaggaattgcagctccatcgttaaaggtgaactatatgtataaaagacccagcactgcatgataaaaatggtcaccctgctggtgatcatctagcaatcttctcaagactttcaattttcaatatcaaaatcaacaagagagcgtaaaattgttagattcagaaaattacgtgatattgttattagtgaccttaataacattcgctcttctgtggaggtgcaaacttgtgaacctttcgtaatagaatcggtacaattttacaacataacacttaaaaacatgctagatgaaattgcacctgtacagTGTGTAC-ATTGAACTGTAGATTTACACGGAATAA--AACATTGTCCATCAATGAATTCATCAAGTCTAACAATGTCGACCTCA-TGGTGATG---ACAGAAA-CATGGCT--TGGTTCT-GA-GATA-GATAAATC-CAT---T-C--TAGC--CGTACTAAC--CCCAGAGGACTACATTGTCATC-CAGAA-ACCAAGA-TTAA-CACGTAA-AG-GTGGTGG-TCTG-CGGTCGTCCACAGT-AATACGA-TCAGCGTGAAGCCGATACG--CCAGGACGTTTCATACTCTCATTTTGA-ACATTTAGAGTGTTCTGTTAGCGTCAAAAATGAA------CA----TATCCGTCTCTGTGTCATTTATCGCCCACCACCATCTAAAGCAAAC-CA-TTTT-CGGAACTCG-TGTTTTTTTGAGGAATGGGC-A-CAATTTTTGGACAGCCTT----GTTATAACA--CCAGGGGAAGTTA-TAATTACT-GGTG-ATCTGAACTTTC--ACATAGACA-----ACACACA-GGAC-AA-CGACGCCAGGAAGTTCCTTGAGC-TGCTGGAAGA--CAG------GG-GAT-GT-CGCA-G-CA-TATTTGC--GAACCAACGCATATCCGG--GGTCAC-ATACTGGAC-GTTC--TCACAACCA----
gi|7 : -CAAGCTC-CTGTAAGATCTAAGGAGATAACT--GCGGCAAA--ATACACAGTGGTTCACTGATGAATTGCTAG-----CAGCCAAAAGAAAGCGTCGACAAACAGAGTGAAAAATGAGACGAA--TAAAACAGAGT--GTCCATA--GAAA-TTGTT--C------------TA---AAGTAACA-AAAATCTTGCT-A--AAAT--GC-AAGAAAGAT-TA-TTATGTTGGCAA--AATTCAAAACCTTGGAAACGATTAC--AAACAA-T-TATACAAAATCATTAATAGGCT--TATGGGAAATAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATG-----ATG-----AGCT--------------T-GCCAAAAAATTTTGCGATTTCTTT-TTA---GG-AAAAATTT------TTTTTTTTTTTTT--A---GAGATGACCTAT--GT--CCAC-GTGG-T-AC-GTCTCCA--CTATGGATGATTCACTACGAGCTGATGTTCAGTTTGTCG-GTTTTCCTCTAGATATCTTT-AACCCTGTGTCAGCCT-C-GGAA--A-TCCGC----AAA---ATTATCA-TGAAAGCACCTCCAAAATCTTGCGAACTAGATCCAATTCCAACAAA-TCTGCTT-A-AGCAATGTTTGGA--CTaaa
gi|8 : aa-----TCTTTATT----GG-AAAAATTCAGAAAA-----------TT--A---GAAATCATCTAT--GT--T--C-CTCA-A-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCACACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT----TCATCAGTG-ATGCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-CGTTTTTGA-AACAATGTTTGGA--GTGTG-TTTCA--CCAATTATCG-TCGAA--ATTATCAACAAATCTTTTTC--AG-AATCGACGGTG-CCA---A-C---GAATTTCA-AAAA-AG-TA-TTGTA----------CG--C--AT---TAATT-AAGCGTCAA---GGACTT--G-ACA-GGACGAATT-AAAAAA-----T-TACAGAC-TGTTTC---AAACTTACCTTTTCTA--TCTACAAT----ATTGGAAAAAGCGGTGGAAACTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTTACTCAACTGAAACGGCTCTA
gi|9 : taat-----TCTTTATT----GG-AAAAATTCAGAAAA-----------TT--A---GAAATCATCTAT--GT--T--C-TTCA-A-ACAGTTTCCCTTCTATGGAATGTGCTCTTTGAGCAGACGGAAAATTCGATG-GTATTCCATTAGAGATGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT---ATCATCAGTG-ATGCGCCAACAAAGTCCTGCCAATAAGACCCGATACCCACTAA-CGTTTTG-A-AACAATGTTTGAA--GTGTG-TTTCA--CCAATTATCG-CCGAA--ATTATTAACAAATCTTTTTC--AG-AATCGACGGTG-CCA---A-C---GAATTTCA-AAAA-AGCTA-TTGTA----------CGGCC--AT---TGATT-AAGCGTCAA---GGACTT--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAATACGTAAACAC-T-TACCAGCTTCACGACCACGTGC---------ACCGAAA-TGTCACTC-ACTGAAACGGCTCTA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): AAAGACGAAAACTCTGACATCTCAACCGAAAGCTTTACAGTATTGAGATATTGCTATAGATTTTACGAAGTGATCTATAATGGAGGTCAAGTGCTCTCCGCTACCACTAGAGCGAGTCTCCTGATGACACTT
Unaligned ( gi|25 ): AGGGTTTTCCTCTAGATATCTTTATTCCTGAGTCAGCCTCGGAAATCCACAAACTTATCATAAAAGCACCTCCAAAATCTTGCGAACTAGA
Unaligned ( gi|26 ): ACGAAAACATCCACCAAAGACTGCATTTCAAATTAACCGAAAAGTACTACTTATATACTAGTACTTTAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 1 1 1 1 1 1 1 11 2222 1 1 11 1 2222 1 111 1 1 1 11 11 1 1 11 111 1 1111 22 11 1 11 1 1 222 1 11 1 22 1 1 1 33333333333333 11 1 1 111 1 1 1 11 11 11 22 5555555555 1 1 222222 444444444444444444 11111 1111 111111 1111111111 1 111111 2222 1 111 11111 11111 111111 333333 77777777777777777777777777777777777777777777777 222 11 1 1 2222222 11 1 111 11111 111 1 1 1 3333333333 1 11 1111 22 11 1 11 1 222222222222222222222222222222222222222222222222222222 1111111 222222222222 11 22222222222 1111 1111 2222 3333333 1111111111 11111
lowQualScore : 5 5 5 5 5 1 5 5 5 22 5 1 1 5 88 1 4444 5 5 77 1 3 7 7 6666 6 2 000 3 3 3 88 44 3 3 88 333 7 6 6 1 7 3 6 2222 00 88 0 3 55 3 3 33 2 3 3 3 99 0 0 777 0 3 33 0 00 0 0 0 33333333333333 3 33 0 0 0 111 0 0 0 22 2 2 33 2 6 66 2 55 3 2 3 3 0 8 3 0 1111111111 0 1 1 0 6 6 6 2 11 5 4 333333 1 99 444444444444444444 4 66666 77 888 5555 3 777777 5 8888888888 3 1 44 6 1 2 99 3 999999 6 0000 5 5 0 333 0 1 777 1 4 1 4 8888 0 9999 66 4 99 5 00000 1 66666 5 88 1 3 777777 1 3 66 0 5 22 1 7 222222 6 777 1 77 77777777777777777777777777777777777777777777777 0 777 33 9 3 2 0 3 33 2 0 6666666 33 0 777 0 9 2 3 3 88888 3 3 777 3 0 0 3 1 6 22 1 1 6 0 0 1 77 1 11 0 6 3 6666666666 1 6 3 5 22 99 1 1 99 6 1 6 6 99 7 8888 88 1 77 0 9999 1 99 6 1 1 77 6 2 00 99 1 1 2 9999 666 1 6 2 00 33 6 9 2 0 00 0 1 333333333333333333333333333333333333333333333333333333 8888888 5 77 555555555555 77 6 5 9999 11 5 3 00 11 0 22 0 55 5 0 5 0 0 88888888888 0000 9999 5 5 55 0 1 0 6 5 0 1 77 5 888 77 6 3333 6 99 0000 99 6 5 66 7777777 5 4 4 7777777777 5 55 777 0 4 2 777 777 4 55 00000 4 0 3 1 777 4 2 3 55 8888 0 1 4 555 1 6 5 1 1 3
lowQualScore : . . . . . . . . . .. . . . . .. . .... . . .. . . . . .... . . ... . . . .. .. . . .. ... . . . . . . . .... .. .. . . .. . . .. . . . . .. . . ... . . .. . .. . . . .............. . .. . . . ... . . . .. . . .. . . .. . .. . . . . . . . . .......... . . . . . . . . .. . . ...... . .. .................. . ..... .. ... .... . ...... . .......... . . .. . . . .. . ...... . .... . . . ... . . ... . . . . .... . .... .. . .. . ..... . ..... . .. . . ...... . . .. . . .. . . ...... . ... . .. ............................................... . ... .. . . . . . .. . . ....... .. . ... . . . . . ..... . . ... . . . . . . .. . . . . . . .. . .. . . . .......... . . . . .. .. . . .. . . . . .. . .... .. . .. . .... . .. . . . .. . . .. .. . . . .... ... . . . .. .. . . . . .. . . ...................................................... ....... . .. ............ .. . . .... .. . . .. .. . .. . .. . . . . . ........... .... .... . . .. . . . . . . . .. . ... .. . .... . .. .... .. . . .. ....... . . . .......... . .. ... . . . ... ... . .. ..... . . . . ... . . . .. .... . . . ... . . . . . .
lowQualScore : 0 5 0 0 5 0 5 0 0 00 0 0 0 5 00 0 5555 5 5 55 0 3 3 3 3333 7 0 000 3 3 3 33 77 3 3 33 000 3 7 7 0 3 3 7 0000 77 33 0 2 88 2 2 88 5 2 2 2 88 0 0 555 0 2 88 0 55 0 0 0 22222222222222 2 88 0 8 0 000 0 0 0 55 5 5 88 5 5 55 5 00 2 5 2 2 8 0 2 8 8888888888 8 0 4 0 7 7 7 3 66 0 0 888888 0 44 444444444444444444 6 77777 77 333 2222 5 333333 2 3333333333 7 5 55 7 0 0 22 2 222222 7 1111 0 0 0 111 9 0 888 0 4 0 4 1111 1 4444 11 0 77 7 11111 0 11111 7 77 7 0 444444 4 9 77 4 7 00 4 1 000000 7 555 0 33 00000000000000000000000000000000000000000000000 2 000 22 8 2 5 0 2 55 5 0 0000000 88 0 555 8 2 5 2 2 55555 2 2 555 2 0 0 3 0 7 00 0 0 6 4 4 0 99 0 44 4 6 7 2222222222 0 7 7 2 00 22 0 0 22 0 0 7 7 22 3 2222 88 0 77 8 3333 0 22 7 7 0 77 7 2 00 22 0 0 2 0000 888 0 5 5 00 88 5 8 5 0 55 0 0 666666666666666666666666666666666666666666666666666666 1111111 7 99 000000000000 99 6 0 9999 99 0 2 55 99 8 11 8 99 0 8 0 5 8 11111111111 6666 8888 6 0 88 8 0 8 6 7 7 3 00 7 999 99 7 3333 7 22 8888 22 7 0 77 4444444 0 4 4 5555555555 3 55 000 3 0 4 000 999 0 44 00000 0 8 7 4 000 8 1 9 55 5555 1 7 4 333 0 7 7 4 5 2
consensus : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTTATG-GTTAT--TA--CCGGGGGAAGT-A-TAATTACN-GGTG-ATCTGAACTT-C--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GAT-TA-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNG-T--G-CGGATCCTGGTN-TATGCG-ACAACAGNGGCAACATT---CG-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTGCATT-----CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT----GG-AAAAATTCAGAAAA-----------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTAT-AA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAN-C---GA-TTTCA-AAAA-AGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGNCAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
Reference ( family-4004 ) : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTTATG-GTTAT--TA--CCGGGGGAAGT-A-TAATTACN-GGTG-ATCTGAACTT-C--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GAT-TA-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNG-T--G-CGGATCCTGGTN-TATGCG-ACAACANNGGCAACATT---CG-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTGCATT-----CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT----GG-AAAAATTCAGAAAA-----------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTAT-AA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAN-C---GA-TTTCA-AAAA-AGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGNCAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|1 : TTCGTGAAGG-AGGGTTTCAGGTCACAGATACCGTTCCA-GCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCAGAGAC-CA-AGGGTT-TGACCGGAATTTGTGGAA-ATTTGATGCATCCT-AAACAACTACGGGGTGTAAAATGATAATAATCATCAT-TCATTGTGAGAGCACTATTGATCACCGCGG-TCAGGGCCATCCATATCAGGCGTATTACCACATATTCTA-CCGAAACGGTTTCCTGAATGAGCCAACCGTGAAGCT-TCCCGATACGAAT-TCAACACACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCCTCAAATTC-CATAATTGATGGTTCCAAAA---TAAAACACACTAGGACCAT--ATCCCTGTGTGCGTTTGA-TTGT-GATCTTCTAGAA-TAATCATCATTGTCCATCAACGAT-ACATCC-GTCTAACA-CATCGATCTAA-TGGTT-TT---ACTGAAAACATGGCT--AGGATCTTGATAACA-GATAA-TT-CAT---TGC--T--C--TGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAAGACTGA-CACGTAG-GGCGTGGGG--TCTGGCGATTGTCCAC--TCAAAGCA--TTAGTGTGAGGCCG-TGTGAACAAAGATACCAT-TACTCGCATTTTGA-ATAC-TAGAGTGCTCTGTTGATGTAAAAAA----------CAACTTTTTTCGACTTTGTGTTATATATCGCC-ACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCAATTTTTCTTTGAAGAATGGGCTA-CC-TATCTGGACAGCCTTATGTGTTAT--TG--CCTGGTGAGGT-ACTTATCACG-GG-G-ATCTCAATTT-C--ATCTAGATG-----ATCCGAA-AAACCAG-AGATGCTAGAGCGTTGACAGAAC-TTTTAAAAGA--TCG------TG-GAT-TA-CGCA-G-CA-TATTTCT--GATGCAACACATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCCGA-A---TATTAC----ATGG-AAC-TCTTTCG-T--G-CAGA-ACTGGTA-TATGTG-ACAACAGTGGCAACATT---TG-TGG-AGA-C-ACCTTGC-AATTC---------GT---------------------CCTCCA---------CCGGAGAAGAAAAAATTGTAAACTTTTCGGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAAGAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGA-GATCT-CATT------TGCCAAAAGAGATCGT-GAAGGGCTGAACGGATTAAGAGAAGAA--CGAAACTGTCT--GTCCACATGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGC--A--CATT--GT-AAAGCACAG-TA-TTACACCAACAA--AATTCAGGAATTAGGCAATGACT-CGAAAACAA-T-TATTCAAGATCACGAACAT-CT--CATGGGGAAAACCAATGTTTCAGTCTTGCCGTG--CATG-AAAACGAAC-----TTG-----AACT--------------T-GC-----------A-----TC--------------AAAATTCAGAAAA-----------TT--AGAAATCATTTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTT-GAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-TGTTTTG-A-AACAATGTTTGGA--GT--GTGTTTTCA--CCAACTATCG-CCGAA--ATTAT----C-AATTTTTTTC--AG-AATCGACGGTG-CCAA-C---GA-ATTTA-AAAACATCTA-TTGTA----------CGGCC--AT---TAATT-AAGC-TCAA---GGACTT--G-ACAAGGACGAAAT-TAAAAA-----T-TACA-ACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAAT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTC---ACCACGCGCAGTCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|10 : TTT-TT----GG-GAAAA----GGAA-------------T--AGAGATGACCTAT-GT-C--CA-TTCGGTACA--TCTCCATCTATGGATGATTCACTAAGGGTTGATGTCCAATTTGGCG-GTTTTCCTCCAGATATCTTT-AATCCCGTCTCAGCCT------A--G-GGAATCCACAAA---ATTACCATGG-AA-GCACCTCCAAAATCTTGCAAACTAGATCCAATTCCAAACAA-TCTGCTT-A-AGCAATGTTTGGACTCT--CTG-CTTCG----AATTATTA-CTGAA--ACCATAAA-CAGATCATTTTC--AA-ACTCAACAGTG-
gi|11 : TCTAAAGCAAAC-CA-TTTGGCGGAACT-GATGTTTTTT--AAGAATTGGCT-----TGTT---ATAAC---------------A--CCAGGGGAATT-A-TGATTACTTGGTGGATCTGAACTT-CTCACCTAGACA-----ACACACAAGGAA-AA-CGACGTCAG-AAGTTCCTTGAGC-TGCTGGAAGA--CAG------GGAAAC-TAGCGCA-GCCA-TATCTGC--GAACCAACACATATCCGGGAGGCTACAATACTGGAC-GTTCTGTTATAACCAAAACAGG--GACAGTTCC-A-A---TTTTGT-----TGT-AGC-CCTCTAGTT--G-TGGATCCGGATT-TATGCG-ACAACATAGGCAAC-TC---CACTGGAAGA-C-CATTCGC-AATTG---------GC---------------------GCTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggaagcatctcgattggacaaacaccttgatata
gi|12 : ----------CGACCCAATCGATAATTCAAGCGACAACAGGGTCTA--T-ACAAAGACGAATT-AGAATA-----A-TGCTGTCCGGTATCCCAAGA---ACTCTTCTTATTTCTAAAGTTCCGGTTCGAAAAactgcttaaacttcaccaagcctcccaggaaagccgaa
gi|13 : gaaatccgaaaaattatcatgaaagcactctcactgcaaatcgtgcgacaccattaccaatgtccaaactagtcatgcaccggagatcgaagtgaagaagctctgcgctccattactactaagctcgaataaagtccagccgtttctatgtcattattacaagctagaaatcgttctagattactcttagttcttagccattagtctctccgttaagaatgatgcatatctcatAAGTT-TCCGGGACACACAGGGTTGTAACCGGAAAGTGTGGAAGAATGGATGCATCCTTAAACAA--ACCGGGT-T--AATGATAATAATC-TCATATCATTGTGAGG--ACTCTTGATCAC-GCGGATCATTGCCATCCATA-CAGG-GT-TTA-CA-ATATCTTACCCGAAACGGTT-CTTGA-TGGAGCA--CGTGAAGCTA-CCCGATACTGATGTCAACA-ACGG--AAACAGAATTGAC--ATCC-GAT-GTCGAAATATGTTCAAACTTGCTACAAATTCACATAACTGA-GGTT--AAAGGTTTAAAAT---CTAGGACCATAAATCACTATGTGC-TTTGAATTGTA-ATC-TCTAGAAATAA--ATCATgtaac
gi|14 : GGAA--CAGTGTTT-TTTGAGGAATGGGC-A-CAATTTTTGGACAGCCTT----GTTAT--TAACCCAGGGGAAGT-T-AAATTACT-GGTT-ATCTGAACTT-T--ACCTAG-CA-----ACACACA-GGAC-AAACGACGCCAGGAAGTTCCTTGAGC-TGCTG--AGA--CAG------GG-GAA-TGTCGCA-G-CA-TATTTGC--GAACCAACACATATCCGG--GGGCAC-ATACTGAGC-GTTC--TCATAACCA----AAACGGACAG-TCC-A-A---TTTTGC----GCGG-TAG-CCTCTAG-TTGG-TGGATCCTGGAT-TATGCG-ACAACAAAGGCAAC-TC---CACTGA-AGACC-ATTTCGC-AATTC---------GC---------------------C
gi|15 : ttttTCAGAAAA-AGCTAATTGTA----------CG-CC--AT---TAATT-AAGCGTCAA---G-ACTT--GTACAAGGACGAATT-AAAAAAAAAAAT-TACAGACCTGTTTC---AAACTTACCTTTC-TA--TCTAAAA-----ATTGGAAAAAGCGGTGGCAGCTAGACT-TGTA-AAAACACAT-AACAC-T-TACCAGCTTCACGACAACGTGCAATCTGCTCACCGAAATTGTCACTCAACTGAAACGGCTCTAactg
gi|16 : GGAGCATT-A-TAATAACG-GGAG-ATTTGAACCTGC--ATCTTGACATTCCAACATGTA-------A-TGACACGATGAGGTTCAAT-AGTATCCTG-------CAGTCTTGCGG-CAT-----GCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----G
gi|17 : agattggccgaagtttttagcagactgcgctacaacagataAAA-AGCTG-TTGTA----------CGACC--AT---TAATT-AAAC----------AC-------CAAGGATGAATTTAAAAAA-----TATACAGACCTGTATC---AAGCTCACATTTTGTA--TTTAAAAT----ATTGGGGAAAACGGTGGCAGCTCGACT-TT-AGAAAACATCTAAATGC-TAAATCATATTTATGACCTTGTGCAA-------ATCA----TGTCA--CA---GGAACGGCTCTAa
gi|18 : TCAACAGTG-CCAT-CCTCG---TTTA-AGAA-TGTCA-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAATT-TAAGAA-----T-TATCGTCTGGTATC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACAC
gi|19 : AT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCC-G--AG-G-TGAGT----GAT---ATTATCAGTG-AT-GCACCAACAAAGTCCTGCCAATTAGACCCGATAC
gi|2 : GTCCAT-AACGATTACATTCAGTCCA-CAA-ATCGATATAAATGGTT-TTTAAACTGAAA-CA-GGCTTGAGTAGCT-GAATACATGATAA-TT-CATCATTGCCAT--CTGCGAAT-AACCGACCAGATGGGAAGCATTTCATTTCACAACACCAAGAGCTGATCACGTAGAGG-GTGGGGGATCTGGCGATTGTA-AT--TCAAA-CAG-TTAGTGTAAA-CC--TGTGAACAAG-ATAC-ATGTAC-CGCATTTTGACACACCTAGA-TGCTCTGTTGATGTAAAA------------CAACTTTTTTTCGCTTTGTGTTATAATTCGCC-ACCGCCATCAACATCAAACCAA-TCTC-CGGA-TTCAAT--TTTTTTGAA--ATGGGCTAACTATCT---GACAGC-TCATG--TTAT--TG--CTGGTGAGAGT-ACT--TTACG-GGGG-ATC--ATTTT-C--ATCT-GATG-----ATCCG-A-AAAG-A---GATTCTAGAGCGTTTCA-GAAC-TTTTAAAAGAATC-G------TG-GATATA-AGCAAG-CA-TATTTCT--GATGCAAATAATCTTCAT--GGTCAT-ACT-TAGATTGTGT--CGATAAC-A----GGGATGA-AG-CCC-ATA---TGTTAC----ATGC-AAT-CCTGTTG-T--GGCAGACCTTGGTAATATGTGCACAAACGTTGCA-CATT----A-TGG-AGA-C-ACCTTGCCGATTCCGACTTGGCGT---------------------CGTTCAAACAACTTCCCGGAGAGGAAAA---TGTA--CTATTTCGAA-GTTGAC-GAAATTGACATACAGCAATTTAAAAAGAGAC-TG-GATTT---T---TCGAGT--TTATTCACAC---AAAGAAAC-TCC--TGAAAAACTTGCTGTGCGAAA-CT-CAA-A---CCGTTTTACAAAC-TACCATCAA-TTTTCATGCCCACTCAGAAATCAAAGGAGATCATTTTACGACCTACAACACTCCTTGGTTTACAGACGATCT-CATT-----CTGCCAAAAGAGATCGT-GAAGGGTGAAG--GATTATGAGAAGAAAGCCAAACTGTCTAGGTCCACAAGGATA-TT-TTTTCAAGGAG-AA-TGTATGCAGTTTACATAAACTCT-GCTTA--CATTAGGC-AAAGCACACGTAATTACAC----AACCAATTCAGGAATTGGGCAATGACTACG-AAACAA-TATATTCAAGATCACGGACAT-CTCATATAGGGAAACAA--TG-TTTAGTCTTGTCG-GTGCATAGAAAACGACA-----TTG-----AACTGTGATCAAATTTGGT-GA-----------A-----TCTTT-TTATTGGA-AAAAATTCAGAAAA-----------TTTAAGAAAT-ATCAATTGTTC--C--TTCAA-ACAGTT--CCTT-TATGGAAAGTGCTCTTCGG--AGACG-AAAATTCGATG-GTATTC-ATTAGAGGTGTTTTGAGC-AGTTACAGTTT-C-C--AAGG-TGAGT----GAATATATCA--AGTG-AT-GCGCCAACAAAGT---GCGCATTAGACCCGATACC--CTAAGCGTTTTG-ATAACAATTGTTGGA--AT--GTG-TTTCAGACCAATTATCGGCCGAATTATTAC-AA-CAAATCTTTTTTCAAGCAATCGACGGTGGCCAAAC---GA-TTTCA-GAAA-AGCTA-TTGTAGCGCATTGTACGGTC--AT---TAATT-AAGCGT-AA---GGACTTTAG-ACAAGGACGAATT-AAAAAA-----T-TACAGACATGTTTC---AAA-TTA---TTTCTA--TCTAAAAT----ATTGG-AAAAGCGGTGGCAGCTA-ACTATG-----AACACATAAA-ACAT-TACCAGCTT-ACGACCAC-TGCAATCTGCCTACGAAAGTTGTCACTCAACTGAAACGGCTCAAT
gi|20 : -CGCA-A-CA-TATTTGC--TAACCAACGCACATCTGG--AGGCAC-ATTCTGGAC-GTTC--TCATTTCCA----AAACGGACAG-TCC-A-C---TTTTGC----GTGGTAGC-CCTCTAGTT--G-TAGATCCTGGCT-TATGCG-ACAACAAAGGC--CATT-------------------TCGC-AATTC---------GC---------------------TC
gi|21 : gtA-TGCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----GAGATAATGA---C-A-AGATTATTTCCATGGTAG-AA--------G-T--GACAGATCCTGGTT-TATCAG-ACGGTTCTGGCAATGTTTCGCG-TGactgcttaact
gi|21 : gcTGATCAC-GCGAAACATTGCCAatcatttcgcagt
gi|22 : gcatgcagcaacatgtgaaggaaccaacgcatgtccgtggacatacactagacgtgatcatcaccagagataatgacaagattatttccatggtagaagtgacagatcctggtttatcagacggttcCAACAGTG-CCAT-C---CT-CTTTT-AAGA-ATTCA-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAATT-TAAGAA-----T-TATCG-TCTGGTAC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACACtttcgcagt
gi|23 : ACCATGTACTCGCATTTTGA-ACACCTAAAGTGCTCTGTTGATGTAAAAAA-AAAAAACAACAACTTTTTTCGACTTTGTGTTATATTTCGCCCACCGCCATCAAAATCAAAC-AATTCTC-CGGAATTCAAT-TTTCTTTGAAGAAc
gi|27 : -CAAGCTC-CTGTAAGATATAAGGAGATACCTGTGCGGCCAA--ATACACAGTGGTTCACTG
gi|28 : tcgataaa-TACCAGCTTCACGACCACGTGCAATCTGCC
gi|3 : TTCGTGAAGGGAGGGTTTC-GGTCACAGATACCGTTCCACGCCGCACAAGGCG-CGGAACCAAGGCAGGTCGGA
gi|3 : TGCCATCCATATCAGG---ATTACCATAT---CTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGGGCAAAGAAAATTGACGA-TCTAGATCGTCGAAATATATC-AAACTTGCTCAAAATTCACATAATTGA-GGTTCCAAAAGTT-AAAACA-ACTAGGACCAC--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAAAAACATCGATCTAA-TGGTT-TTA--ACTAAAA-CATGGCT--ATGATCT-GAT-ACA-AATAA-TTCCAT---TGCA-T--C--TGAATTTAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAA-GGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAGATTAGTGTGAGGCC--TGTGAACAAAGATACCATGTACTCGCGTTTTGA-ACACCTAGAGTGCTATGTTGGTGTAAAAAA-AAACC----CAACTTTTTTCGTCTTTGTGTTATATATCGCCCACCGCCGTCACAATCAAAC-AA-TCTC-CGGAATTCAAT-TTTCTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|3 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngATTTCT--GATGCAACTTATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCC-A-A---TATTGC----ATGG-AACTCCTTTCG-T--GGCAGAACCTGGTA-TATGTG-ACAACAGTGGCAACATT---AG-TGG-AGA-CCACCTTGC-GATTC---------GTACTTTGCTGTCTTTCAACAAACCTCAA---------CCGGAGAGGAAAAA--TGTAA-CT-TTCCGGAAATGGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CGACAATA---CTGTTTTACAAAC-TACCGTCAATTTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGACGATCTTCATT-----CTGCCAAAAGAGATCGTCGAAGGGCTGAACGGATTATGAGAAGAA--CCAAACTGTCT--GTCCACAAGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGCT-A--CATT--TT-AAAGCACAA-TA-TTACACCAACAA--AATTGAGGAATTAGGCAATGACT-CG-AAACAA-T-TATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|4 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnna---------------------CCTCC----------CAGGAAGCGAAAAAC-TGTGA-CCATTCCGAAAGCTTTCCAGTATTGATAT-T-GCTCTTTT------TACCTGTGATCTAAATGAATCGAGTGCTCTCC-GCACCCTAGAGCGGTCTCTGCTGAA---CTTACTG-AC---AGTTACAATAGGACCCT----CAAACAGACCATCGA-TAAACAAGCTC-CTGTAAGATCTAAGGAGATAACTGTGCGGCCAA--ATACACAGTGGTTCACTGATGAGTTGC--TAGAG-CAGCCAAAAGAAAGCGTCGACAAACAGAGCGAACAATGAGACGAA--CAAAACTGAGT--GTCCATAGAGAAA-TT-TT--TAAGGAA-AATTGTTCTAAAGTGACC-AAA-TCTTGCT-A--AAAT--GC-AA-GAAGAT-TA-TTATGTTGGCAA--A-TTCAAGAACTTGGAAACGATTAC---AACAAAT-TATACAA-ATCATTAATAGACT--TATGGGAATAAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATGATGACTTGCCAAAAATT--------------TTGC-----------GATT--TCTTT-TT----GGGAAAAATT--AAAAA-----------TT--AGAGACGACCTAT-GT-C--CACCTGGT-AC-GTCTCCAT-CTATGGATGATTCATTACGAGCTGATGTCCAGTTTGCCGTGTGTTCCTCTAGATGTCTTT-AATCCTGTGTCAGCCA-C-GGAA--A-TCCGA----AAA---ATTATCA-TG-AAAGCACCTCCAAAACCTTGCGAACTAGATCCAATTCCAACTAA-TCTGCTT-A-AGCAATGTTTGGA--CTCTGTG-CTTC----CTATTATTA-CTGAA--ATCAT-AAACAGATCATTATC--AA-ACTCAACAGTG-CCAT-CCTCG---TTTA-AGAA-TGCAA-TTGTT----------CGACC--AC---TTATC-AAGCGACAA---GGGCTA--G-ACAAAGACGAATT-TAAGAA-----T-TATCGTCCGGTATC---CAATTTACCGTTCTTA--TCT-AAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-
gi|5 : gTCAAAGGTGACTACCATCCACCCAG--ACTGTCCGTGGT--AC---CCATCTGAACTTCGAGCTGCCAAAAGGGAGCGGCGAAGGGCGGAGAGGCAGATGCGTAGGA--CTCGTTTGACT--GTCCATCAGGAAATTT-TT--C--GTAGTCAATGTGCCCAGGTATCA-AAA--CTTGCT-GTTCAGT--GTAAAAGGAC-G-TA-CTATTCAAGCAA--AATTGAAGAAGTGGGTAAAGATCA-G-AAACAG-C-TATca
gi|6 : atcaacttacttgggaggccataccctagatgttgtgatagcgaggaattgcagctccatcgttaaaggtgaactatatgtataaaagacccagcactgcatgataaaaatggtcaccctgctggtgatcatctagcaatcttctcaagactttcaattttcaatatcaaaatcaacaagagagcgtaaaattgttagattcagaaaattacgtgatattgttattagtgaccttaataacattcgctcttctgtggaggtgcaaacttgtgaacctttcgtaatagaatcggtacaattttacaacataacacttaaaaacatgctagatgaaattgcacctgtacagTGTGTAC-ATTGAACTGTAGATTTACACGGAATAA--AACATTGTCCATCAATGAATTCATCAAGTCTAACAATGTCGACCTCA-TGGTGATG---ACAGAAA-CATGGCT--TGGTTCT-GA-GATA-GATAAATC-CAT---T-C--TAGC--CGTACTAAC--CCCAGAGGACTACATTGTCATC-CAGAA-ACCAAGA-TTAA-CACGTAA-AG-GTGGTGG-TCTG-CGGTCGTCCACAGT-AATACGA-TCAGCGTGAAGCCGATACG--CCAGGACGTTTCATACTCTCATTTTGA-ACATTTAGAGTGTTCTGTTAGCGTCAAAAATGAA------CA----TATCCGTCTCTGTGTCATTTATCGCCCACCACCATCTAAAGCAAAC-CA-TTTT-CGGAACTCG-TGTTTTTTTGAGGAATGGGC-A-CAATTTTTGGACAGCCTT----GTTATAACA--CCAGGGGAAGTTA-TAATTACT-GGTG-ATCTGAACTTTC--ACATAGACA-----ACACACA-GGAC-AA-CGACGCCAGGAAGTTCCTTGAGC-TGCTGGAAGA--CAG------GG-GAT-GT-CGCA-G-CA-TATTTGC--GAACCAACGCATATCCGG--GGTCAC-ATACTGGAC-GTTC--TCACAACCA----
gi|7 : -CAAGCTC-CTGTAAGATCTAAGGAGATAACT--GCGGCAAA--ATACACAGTGGTTCACTGATGAATTGCTAG-----CAGCCAAAAGAAAGCGTCGACAAACAGAGTGAAAAATGAGACGAA--TAAAACAGAGT--GTCCATA--GAAA-TTGTT--C------------TA---AAGTAACA-AAAATCTTGCT-A--AAAT--GC-AAGAAAGAT-TA-TTATGTTGGCAA--AATTCAAAACCTTGGAAACGATTAC--AAACAA-T-TATACAAAATCATTAATAGGCT--TATGGGAAATAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATG-----ATG-----AGCT--------------T-GCCAAAAAATTTTGCGATTTCTTT-TTA---GG-AAAAATTT------TTTTTTTTTTTTT--AGAGATGACCTAT-GT-CCAC--GTGGT-AC-GTCTCCA--CTATGGATGATTCACTACGAGCTGATGTTCAGTTTGTCG-GTTTTCCTCTAGATATCTTT-AACCCTGTGTCAGCCT-C-GGAA--A-TCCGC----AAA---ATTATCA-TGAAA-GCACCTCCAAAATCTTGCGAACTAGATCCAATTCCAACAAA-TCTGCTT-A-AGCAATGTTTGGA--CT--aaa
gi|8 : aa-----TCTTTATT----GG-AAAAATTCAGAAAA-----------TT--AGAAATCATCTAT-GT-T--C--CTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCACACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT----TCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-CGTTTTTGA-AACAATGTTTGGA--GT--GTG-TTTCA--CCAATTATCG-TCGAA--ATTATCAA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAA-C---GAATTTCA-AAAA-AG-TA-TTGTA----------CG--C--AT---TAATT-AAGCGTCAA---GGACTT--G-ACA-GGACGAATT-AAAAAA-----T-TACAGAC-TGTTTC---AAACTTACCTTTTCTA--TCTACAAT----ATTGGAAAAAGCGGTGGAAACTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTTACTCAACTGAAACGGCTCTA
gi|9 : taat-----TCTTTATT----GG-AAAAATTCAGAAAA-----------TT--AGAAATCATCTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAATGTGCTCTTTGAGCAGACGGAAAATTCGATG-GTATTCCATTAGAGATGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATAAGACCCGATACCCACTAA-CGTTTTG-A-AACAATGTTTGAA--GT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTATTAA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAA-C---GAATTTCA-AAAA-AGCTA-TTGTA----------CGGCC--AT---TGATT-AAGCGTCAA---GGACTT--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAATACGTAAACAC-T-TACCAGCTTCACGACCACGTGC---------ACCGAAA-TGTCACTC-ACTGAAACGGCTCTA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): AAAGACGAAAACTCTGACATCTCAACCGAAAGCTTTACAGTATTGAGATATTGCTATAGATTTTACGAAGTGATCTATAATGGAGGTCAAGTGCTCTCCGCTACCACTAGAGCGAGTCTCCTGATGACACTT
Unaligned ( gi|25 ): AGGGTTTTCCTCTAGATATCTTTATTCCTGAGTCAGCCTCGGAAATCCACAAACTTATCATAAAAGCACCTCCAAAATCTTGCGAACTAGA
Unaligned ( gi|26 ): ACGAAAACATCCACCAAAGACTGCATTTCAAATTAACCGAAAAGTACTACTTATATACTAGTACTTTAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 1 1 1 1 1 1 1 11 2222 1 1 11 1 2222 1 111 1 1 1 11 11 1 1 11 111 1 1111 22 11 1 11 1 1 222 1 11 1 22 1 1 1 33333333333333 11 1 1 111 1 1 1 11 11 11 22 5555555555 1 1 222222 444444444444444444 11111 1111 111111 1111111111 1 111111 2222 1 111 11111 11111 111111 333333 77777777777777777777777777777777777777777777777 222 11 1 1 2222222 11 1 111 11111 111 1 1 1 3333333333 1 11 1111 22 11 1 11 1 222222222222222222222222222222222222222222222222222222 1111111 222222222222 11 22222222222 1111 1111 2222 3333333 1111111111 11111
lowQualScore : 5 5 5 5 5 1 5 5 5 22 5 1 1 5 88 1 4444 5 5 77 1 3 7 7 6666 6 2 000 3 3 3 88 44 3 3 88 333 7 6 6 1 7 3 6 2222 00 88 0 3 55 3 3 33 2 3 3 3 99 0 0 777 0 3 33 0 00 0 0 0 33333333333333 3 33 0 0 0 111 0 0 0 22 2 2 33 2 6 66 2 55 3 2 3 3 0 8 3 0 1111111111 0 1 1 0 6 6 6 2 11 5 4 333333 1 99 444444444444444444 4 66666 77 888 5555 3 777777 5 8888888888 3 1 44 6 1 2 99 3 999999 6 0000 5 5 0 333 0 1 777 1 4 1 4 8888 0 9999 66 4 99 5 00000 1 66666 5 88 1 3 777777 1 3 66 0 5 22 1 7 222222 6 777 1 77 77777777777777777777777777777777777777777777777 0 777 33 9 3 2 0 3 33 2 0 6666666 33 0 777 0 9 2 3 3 88888 3 3 777 3 0 0 3 1 6 22 1 1 6 0 0 1 77 1 11 0 6 3 6666666666 1 6 3 5 22 99 1 1 99 6 1 6 6 99 7 8888 88 1 77 0 9999 1 99 6 1 1 77 6 2 00 99 1 1 2 9999 666 1 6 2 00 33 6 9 2 0 00 0 1 333333333333333333333333333333333333333333333333333333 8888888 5 77 555555555555 77 6 5 9999 11 5 3 00 11 0 22 0 55 5 0 5 0 0 88888888888 0000 9999 5 5 55 0 1 0 6 5 0 1 77 5 888 77 6 3333 6 99 0000 99 6 5 66 7777777 5 4 4 7777777777 5 55 777 0 4 2 777 777 4 55 00000 4 0 3 1 777 4 2 3 55 8888 0 1 4 555 1 6 5 1 1 3
lowQualScore : . . . . . . . . . .. . . . . .. . .... . . .. . . . . .... . . ... . . . .. .. . . .. ... . . . . . . . .... .. .. . . .. . . .. . . . . .. . . ... . . .. . .. . . . .............. . .. . . . ... . . . .. . . .. . . .. . .. . . . . . . . . .......... . . . . . . . . .. . . ...... . .. .................. . ..... .. ... .... . ...... . .......... . . .. . . . .. . ...... . .... . . . ... . . ... . . . . .... . .... .. . .. . ..... . ..... . .. . . ...... . . .. . . .. . . ...... . ... . .. ............................................... . ... .. . . . . . .. . . ....... .. . ... . . . . . ..... . . ... . . . . . . .. . . . . . . .. . .. . . . .......... . . . . .. .. . . .. . . . . .. . .... .. . .. . .... . .. . . . .. . . .. .. . . . .... ... . . . .. .. . . . . .. . . ...................................................... ....... . .. ............ .. . . .... .. . . .. .. . .. . .. . . . . . ........... .... .... . . .. . . . . . . . .. . ... .. . .... . .. .... .. . . .. ....... . . . .......... . .. ... . . . ... ... . .. ..... . . . . ... . . . .. .... . . . ... . . . . . .
lowQualScore : 0 5 0 0 5 0 5 0 0 00 0 0 0 5 00 0 5555 5 5 55 0 3 3 3 3333 7 0 000 3 3 3 33 77 3 3 33 000 3 7 7 0 3 3 7 0000 77 33 0 2 88 2 2 88 5 2 2 2 88 0 0 555 0 2 88 0 55 0 0 0 22222222222222 2 88 0 8 0 000 0 0 0 55 5 5 88 5 5 55 5 00 2 5 2 2 8 0 2 8 8888888888 8 0 4 0 7 7 7 3 66 0 0 888888 0 44 444444444444444444 6 77777 77 333 2222 5 333333 2 3333333333 7 5 55 7 0 0 22 2 222222 7 1111 0 0 0 111 9 0 888 0 4 0 4 1111 1 4444 11 0 77 7 11111 0 11111 7 77 7 0 444444 4 9 77 4 7 77 4 1 000000 7 555 0 33 00000000000000000000000000000000000000000000000 2 000 22 8 2 5 0 2 55 5 0 0000000 88 0 555 8 2 5 2 2 55555 2 2 555 2 0 0 3 0 7 00 0 0 6 4 4 0 99 0 44 4 6 7 2222222222 0 7 7 2 00 22 0 0 22 0 0 7 7 22 3 2222 88 0 77 8 3333 0 22 7 7 0 77 7 2 00 22 0 0 2 0000 888 0 5 5 00 88 5 8 5 0 55 0 0 666666666666666666666666666666666666666666666666666666 1111111 7 99 000000000000 99 6 0 9999 99 0 2 55 99 8 11 8 99 0 8 0 5 8 11111111111 6666 8888 6 0 88 8 0 8 6 7 7 3 00 7 999 99 7 3333 7 22 8888 22 7 0 77 4444444 0 4 4 5555555555 3 55 000 3 0 4 000 999 0 44 00000 0 8 7 4 000 8 1 9 55 5555 1 7 4 333 0 7 7 4 5 2
consensus : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTTATG-GTTAT--TA--CCGGGGGAAGT-A-TAATTACN-GGTG-ATCTGAACTT-C--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GAT-TA-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNG-T--G-CGGATCCTGGTN-TATGCG-ACAACAGNGGCAACATT---CG-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTGCATT-----CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT----GG-AAAAATTCAGAAAA-----------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTAT-AA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAN-C---GA-TTTCA-AAAA-AGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGNCAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
Reference ( family-4004 ) : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTTATG-GTTAT--TA--CCGGGGGAAGT-A-TAATTACN-GGTG-ATCTGAACTT-C--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GAT-TA-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNG-T--G-CGGATCCTGGTN-TATGCG-ACAACAGNGGCAACATT---CG-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTGCATT-----CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT----GG-AAAAATTCAGAAAA-----------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTAT-AA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAN-C---GA-TTTCA-AAAA-AGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGNCAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|1 : TTCGTGAAGG-AGGGTTTCAGGTCACAGATACCGTTCCA-GCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCAGAGAC-CA-AGGGTT-TGACCGGAATTTGTGGAA-ATTTGATGCATCCT-AAACAACTACGGGGTGTAAAATGATAATAATCATCAT-TCATTGTGAGAGCACTATTGATCACCGCGG-TCAGGGCCATCCATATCAGGCGTATTACCACATATTCTA-CCGAAACGGTTTCCTGAATGAGCCAACCGTGAAGCT-TCCCGATACGAAT-TCAACACACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCCTCAAATTC-CATAATTGATGGTTCCAAAA---TAAAACACACTAGGACCAT--ATCCCTGTGTGCGTTTGA-TTGT-GATCTTCTAGAA-TAATCATCATTGTCCATCAACGAT-ACATCC-GTCTAACA-CATCGATCTAA-TGGTT-TT---ACTGAAAACATGGCT--AGGATCTTGATAACA-GATAA-TT-CAT---TGC--T--C--TGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAAGACTGA-CACGTAG-GGCGTGGGG--TCTGGCGATTGTCCAC--TCAAAGCA--TTAGTGTGAGGCCG-TGTGAACAAAGATACCAT-TACTCGCATTTTGA-ATAC-TAGAGTGCTCTGTTGATGTAAAAAA----------CAACTTTTTTCGACTTTGTGTTATATATCGCC-ACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCAATTTTTCTTTGAAGAATGGGCTA-CC-TATCTGGACAGCCTTATGTGTTAT--TG--CCTGGTGAGGT-ACTTATCACG-GG-G-ATCTCAATTT-C--ATCTAGATG-----ATCCGAA-AAACCAG-AGATGCTAGAGCGTTGACAGAAC-TTTTAAAAGA--TCG------TG-GAT-TA-CGCA-G-CA-TATTTCT--GATGCAACACATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCCGA-A---TATTAC----ATGG-AAC-TCTTTCG-T--G-CAGA-ACTGGTA-TATGTG-ACAACAGTGGCAACATT---TG-TGG-AGA-C-ACCTTGC-AATTC---------GT---------------------CCTCCA---------CCGGAGAAGAAAAAATTGTAAACTTTTCGGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAAGAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGA-GATCT-CATT------TGCCAAAAGAGATCGT-GAAGGGCTGAACGGATTAAGAGAAGAA--CGAAACTGTCT--GTCCACATGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGC--A--CATT--GT-AAAGCACAG-TA-TTACACCAACAA--AATTCAGGAATTAGGCAATGACT-CGAAAACAA-T-TATTCAAGATCACGAACAT-CT--CATGGGGAAAACCAATGTTTCAGTCTTGCCGTG--CATG-AAAACGAAC-----TTG-----AACT--------------T-GC-----------A-----TC--------------AAAATTCAGAAAA-----------TT--AGAAATCATTTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTT-GAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-TGTTTTG-A-AACAATGTTTGGA--GT--GTGTTTTCA--CCAACTATCG-CCGAA--ATTAT----C-AATTTTTTTC--AG-AATCGACGGTG-CCAA-C---GA-ATTTA-AAAACATCTA-TTGTA----------CGGCC--AT---TAATT-AAGC-TCAA---GGACTT--G-ACAAGGACGAAAT-TAAAAA-----T-TACA-ACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAAT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTC---ACCACGCGCAGTCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|10 : TTT-TT----GG-GAAAA----GGAA-------------T--AGAGATGACCTAT-GT-C--CA-TTCGGTACA--TCTCCATCTATGGATGATTCACTAAGGGTTGATGTCCAATTTGGCG-GTTTTCCTCCAGATATCTTT-AATCCCGTCTCAGCCT------A--G-GGAATCCACAAA---ATTACCATGG-AA-GCACCTCCAAAATCTTGCAAACTAGATCCAATTCCAAACAA-TCTGCTT-A-AGCAATGTTTGGACTCT--CTG-CTTCG----AATTATTA-CTGAA--ACCATAAA-CAGATCATTTTC--AA-ACTCAACAGTG-
gi|11 : TCTAAAGCAAAC-CA-TTTGGCGGAACT-GATGTTTTTT--AAGAATTGGCT-----TGTT---ATAAC---------------A--CCAGGGGAATT-A-TGATTACTTGGTGGATCTGAACTT-CTCACCTAGACA-----ACACACAAGGAA-AA-CGACGTCAG-AAGTTCCTTGAGC-TGCTGGAAGA--CAG------GGAAAC-TAGCGCA-GCCA-TATCTGC--GAACCAACACATATCCGGGAGGCTACAATACTGGAC-GTTCTGTTATAACCAAAACAGG--GACAGTTCC-A-A---TTTTGT-----TGT-AGC-CCTCTAGTT--G-TGGATCCGGATT-TATGCG-ACAACATAGGCAAC-TC---CACTGGAAGA-C-CATTCGC-AATTG---------GC---------------------GCTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggaagcatctcgattggacaaacaccttgatata
gi|12 : ----------CGACCCAATCGATAATTCAAGCGACAACAGGGTCTA--T-ACAAAGACGAATT-AGAATA-----A-TGCTGTCCGGTATCCCAAGA---ACTCTTCTTATTTCTAAAGTTCCGGTTCGAAAAactgcttaaacttcaccaagcctcccaggaaagccgaa
gi|13 : gaaatccgaaaaattatcatgaaagcactctcactgcaaatcgtgcgacaccattaccaatgtccaaactagtcatgcaccggagatcgaagtgaagaagctctgcgctccattactactaagctcgaataaagtccagccgtttctatgtcattattacaagctagaaatcgttctagattactcttagttcttagccattagtctctccgttaagaatgatgcatatctcatAAGTT-TCCGGGACACACAGGGTTGTAACCGGAAAGTGTGGAAGAATGGATGCATCCTTAAACAA--ACCGGGT-T--AATGATAATAATC-TCATATCATTGTGAGG--ACTCTTGATCAC-GCGGATCATTGCCATCCATA-CAGG-GT-TTA-CA-ATATCTTACCCGAAACGGTT-CTTGA-TGGAGCA--CGTGAAGCTA-CCCGATACTGATGTCAACA-ACGG--AAACAGAATTGAC--ATCC-GAT-GTCGAAATATGTTCAAACTTGCTACAAATTCACATAACTGA-GGTT--AAAGGTTTAAAAT---CTAGGACCATAAATCACTATGTGC-TTTGAATTGTA-ATC-TCTAGAAATAA--ATCATgtaac
gi|14 : GGAA--CAGTGTTT-TTTGAGGAATGGGC-A-CAATTTTTGGACAGCCTT----GTTAT--TAACCCAGGGGAAGT-T-AAATTACT-GGTT-ATCTGAACTT-T--ACCTAG-CA-----ACACACA-GGAC-AAACGACGCCAGGAAGTTCCTTGAGC-TGCTG--AGA--CAG------GG-GAA-TGTCGCA-G-CA-TATTTGC--GAACCAACACATATCCGG--GGGCAC-ATACTGAGC-GTTC--TCATAACCA----AAACGGACAG-TCC-A-A---TTTTGC----GCGG-TAG-CCTCTAG-TTGG-TGGATCCTGGAT-TATGCG-ACAACAAAGGCAAC-TC---CACTGA-AGACC-ATTTCGC-AATTC---------GC---------------------C
gi|15 : ttttTCAGAAAA-AGCTAATTGTA----------CG-CC--AT---TAATT-AAGCGTCAA---G-ACTT--GTACAAGGACGAATT-AAAAAAAAAAAT-TACAGACCTGTTTC---AAACTTACCTTTC-TA--TCTAAAA-----ATTGGAAAAAGCGGTGGCAGCTAGACT-TGTA-AAAACACAT-AACAC-T-TACCAGCTTCACGACAACGTGCAATCTGCTCACCGAAATTGTCACTCAACTGAAACGGCTCTAactg
gi|16 : GGAGCATT-A-TAATAACG-GGAG-ATTTGAACCTGC--ATCTTGACATTCCAACATGTA-------A-TGACACGATGAGGTTCAAT-AGTATCCTG-------CAGTCTTGCGG-CAT-----GCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----G
gi|17 : agattggccgaagtttttagcagactgcgctacaacagataAAA-AGCTG-TTGTA----------CGACC--AT---TAATT-AAAC----------AC-------CAAGGATGAATTTAAAAAA-----TATACAGACCTGTATC---AAGCTCACATTTTGTA--TTTAAAAT----ATTGGGGAAAACGGTGGCAGCTCGACT-TT-AGAAAACATCTAAATGC-TAAATCATATTTATGACCTTGTGCAA-------ATCA----TGTCA--CA---GGAACGGCTCTAa
gi|18 : TCAACAGTG-CCAT-CCTCG---TTTA-AGAA-TGTCA-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAATT-TAAGAA-----T-TATCGTCTGGTATC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACAC
gi|19 : AT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCC-G--AG-G-TGAGT----GAT---ATTATCAGTG-AT-GCACCAACAAAGTCCTGCCAATTAGACCCGATAC
gi|2 : GTCCAT-AACGATTACATTCAGTCCA-CAA-ATCGATATAAATGGTT-TTTAAACTGAAA-CA-GGCTTGAGTAGCT-GAATACATGATAA-TT-CATCATTGCCAT--CTGCGAAT-AACCGACCAGATGGGAAGCATTTCATTTCACAACACCAAGAGCTGATCACGTAGAGG-GTGGGGGATCTGGCGATTGTA-AT--TCAAA-CAG-TTAGTGTAAA-CC--TGTGAACAAG-ATAC-ATGTAC-CGCATTTTGACACACCTAGA-TGCTCTGTTGATGTAAAA------------CAACTTTTTTTCGCTTTGTGTTATAATTCGCC-ACCGCCATCAACATCAAACCAA-TCTC-CGGA-TTCAAT--TTTTTTGAA--ATGGGCTAACTATCT---GACAGC-TCATG--TTAT--TG--CTGGTGAGAGT-ACT--TTACG-GGGG-ATC--ATTTT-C--ATCT-GATG-----ATCCG-A-AAAG-A---GATTCTAGAGCGTTTCA-GAAC-TTTTAAAAGAATC-G------TG-GATATA-AGCAAG-CA-TATTTCT--GATGCAAATAATCTTCAT--GGTCAT-ACT-TAGATTGTGT--CGATAAC-A----GGGATGA-AG-CCC-ATA---TGTTAC----ATGC-AAT-CCTGTTG-T--GGCAGACCTTGGTAATATGTGCACAAACGTTGCA-CATT----A-TGG-AGA-C-ACCTTGCCGATTCCGACTTGGCGT---------------------CGTTCAAACAACTTCCCGGAGAGGAAAA---TGTA--CTATTTCGAA-GTTGAC-GAAATTGACATACAGCAATTTAAAAAGAGAC-TG-GATTT---T---TCGAGT--TTATTCACAC---AAAGAAAC-TCC--TGAAAAACTTGCTGTGCGAAA-CT-CAA-A---CCGTTTTACAAAC-TACCATCAA-TTTTCATGCCCACTCAGAAATCAAAGGAGATCATTTTACGACCTACAACACTCCTTGGTTTACAGACGATCT-CATT-----CTGCCAAAAGAGATCGT-GAAGGGTGAAG--GATTATGAGAAGAAAGCCAAACTGTCTAGGTCCACAAGGATA-TT-TTTTCAAGGAG-AA-TGTATGCAGTTTACATAAACTCT-GCTTA--CATTAGGC-AAAGCACACGTAATTACAC----AACCAATTCAGGAATTGGGCAATGACTACG-AAACAA-TATATTCAAGATCACGGACAT-CTCATATAGGGAAACAA--TG-TTTAGTCTTGTCG-GTGCATAGAAAACGACA-----TTG-----AACTGTGATCAAATTTGGT-GA-----------A-----TCTTT-TTATTGGA-AAAAATTCAGAAAA-----------TTTAAGAAAT-ATCAATTGTTC--C--TTCAA-ACAGTT--CCTT-TATGGAAAGTGCTCTTCGG--AGACG-AAAATTCGATG-GTATTC-ATTAGAGGTGTTTTGAGC-AGTTACAGTTT-C-C--AAGG-TGAGT----GAATATATCA--AGTG-AT-GCGCCAACAAAGT---GCGCATTAGACCCGATACC--CTAAGCGTTTTG-ATAACAATTGTTGGA--AT--GTG-TTTCAGACCAATTATCGGCCGAATTATTAC-AA-CAAATCTTTTTTCAAGCAATCGACGGTGGCCAAAC---GA-TTTCA-GAAA-AGCTA-TTGTAGCGCATTGTACGGTC--AT---TAATT-AAGCGT-AA---GGACTTTAG-ACAAGGACGAATT-AAAAAA-----T-TACAGACATGTTTC---AAA-TTA---TTTCTA--TCTAAAAT----ATTGG-AAAAGCGGTGGCAGCTA-ACTATG-----AACACATAAA-ACAT-TACCAGCTT-ACGACCAC-TGCAATCTGCCTACGAAAGTTGTCACTCAACTGAAACGGCTCAAT
gi|20 : -CGCA-A-CA-TATTTGC--TAACCAACGCACATCTGG--AGGCAC-ATTCTGGAC-GTTC--TCATTTCCA----AAACGGACAG-TCC-A-C---TTTTGC----GTGGTAGC-CCTCTAGTT--G-TAGATCCTGGCT-TATGCG-ACAACAAAGGC--CATT-------------------TCGC-AATTC---------GC---------------------TC
gi|21 : gtA-TGCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----GAGATAATGA---C-A-AGATTATTTCCATGGTAG-AA--------G-T--GACAGATCCTGGTT-TATCAG-ACGGTTCTGGCAATGTTTCGCG-TGactgcttaact
gi|21 : gcTGATCAC-GCGAAACATTGCCAatcatttcgcagt
gi|22 : gcatgcagcaacatgtgaaggaaccaacgcatgtccgtggacatacactagacgtgatcatcaccagagataatgacaagattatttccatggtagaagtgacagatcctggtttatcagacggttcCAACAGTG-CCAT-C---CT-CTTTT-AAGA-ATTCA-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAATT-TAAGAA-----T-TATCG-TCTGGTAC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACACtttcgcagt
gi|23 : ACCATGTACTCGCATTTTGA-ACACCTAAAGTGCTCTGTTGATGTAAAAAA-AAAAAACAACAACTTTTTTCGACTTTGTGTTATATTTCGCCCACCGCCATCAAAATCAAAC-AATTCTC-CGGAATTCAAT-TTTCTTTGAAGAAc
gi|27 : -CAAGCTC-CTGTAAGATATAAGGAGATACCTGTGCGGCCAA--ATACACAGTGGTTCACTG
gi|28 : tcgataaa-TACCAGCTTCACGACCACGTGCAATCTGCC
gi|3 : TTCGTGAAGGGAGGGTTTC-GGTCACAGATACCGTTCCACGCCGCACAAGGCG-CGGAACCAAGGCAGGTCGGA
gi|3 : TGCCATCCATATCAGG---ATTACCATAT---CTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGGGCAAAGAAAATTGACGA-TCTAGATCGTCGAAATATATC-AAACTTGCTCAAAATTCACATAATTGA-GGTTCCAAAAGTT-AAAACA-ACTAGGACCAC--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAAAAACATCGATCTAA-TGGTT-TTA--ACTAAAA-CATGGCT--ATGATCT-GAT-ACA-AATAA-TTCCAT---TGCA-T--C--TGAATTTAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAA-GGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAGATTAGTGTGAGGCC--TGTGAACAAAGATACCATGTACTCGCGTTTTGA-ACACCTAGAGTGCTATGTTGGTGTAAAAAA-AAACC----CAACTTTTTTCGTCTTTGTGTTATATATCGCCCACCGCCGTCACAATCAAAC-AA-TCTC-CGGAATTCAAT-TTTCTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|3 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngATTTCT--GATGCAACTTATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCC-A-A---TATTGC----ATGG-AACTCCTTTCG-T--GGCAGAACCTGGTA-TATGTG-ACAACAGTGGCAACATT---AG-TGG-AGA-CCACCTTGC-GATTC---------GTACTTTGCTGTCTTTCAACAAACCTCAA---------CCGGAGAGGAAAAA--TGTAA-CT-TTCCGGAAATGGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CGACAATA---CTGTTTTACAAAC-TACCGTCAATTTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGACGATCTTCATT-----CTGCCAAAAGAGATCGTCGAAGGGCTGAACGGATTATGAGAAGAA--CCAAACTGTCT--GTCCACAAGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGCT-A--CATT--TT-AAAGCACAA-TA-TTACACCAACAA--AATTGAGGAATTAGGCAATGACT-CG-AAACAA-T-TATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|4 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnna---------------------CCTCC----------CAGGAAGCGAAAAAC-TGTGA-CCATTCCGAAAGCTTTCCAGTATTGATAT-T-GCTCTTTT------TACCTGTGATCTAAATGAATCGAGTGCTCTCC-GCACCCTAGAGCGGTCTCTGCTGAA---CTTACTG-AC---AGTTACAATAGGACCCT----CAAACAGACCATCGA-TAAACAAGCTC-CTGTAAGATCTAAGGAGATAACTGTGCGGCCAA--ATACACAGTGGTTCACTGATGAGTTGC--TAGAG-CAGCCAAAAGAAAGCGTCGACAAACAGAGCGAACAATGAGACGAA--CAAAACTGAGT--GTCCATAGAGAAA-TT-TT--TAAGGAA-AATTGTTCTAAAGTGACC-AAA-TCTTGCT-A--AAAT--GC-AA-GAAGAT-TA-TTATGTTGGCAA--A-TTCAAGAACTTGGAAACGATTAC---AACAAAT-TATACAA-ATCATTAATAGACT--TATGGGAATAAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATGATGACTTGCCAAAAATT--------------TTGC-----------GATT--TCTTT-TT----GGGAAAAATT--AAAAA-----------TT--AGAGACGACCTAT-GT-C--CACCTGGT-AC-GTCTCCAT-CTATGGATGATTCATTACGAGCTGATGTCCAGTTTGCCGTGTGTTCCTCTAGATGTCTTT-AATCCTGTGTCAGCCA-C-GGAA--A-TCCGA----AAA---ATTATCA-TG-AAAGCACCTCCAAAACCTTGCGAACTAGATCCAATTCCAACTAA-TCTGCTT-A-AGCAATGTTTGGA--CTCTGTG-CTTC----CTATTATTA-CTGAA--ATCAT-AAACAGATCATTATC--AA-ACTCAACAGTG-CCAT-CCTCG---TTTA-AGAA-TGCAA-TTGTT----------CGACC--AC---TTATC-AAGCGACAA---GGGCTA--G-ACAAAGACGAATT-TAAGAA-----T-TATCGTCCGGTATC---CAATTTACCGTTCTTA--TCT-AAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-
gi|5 : gTCAAAGGTGACTACCATCCACCCAG--ACTGTCCGTGGT--AC---CCATCTGAACTTCGAGCTGCCAAAAGGGAGCGGCGAAGGGCGGAGAGGCAGATGCGTAGGA--CTCGTTTGACT--GTCCATCAGGAAATTT-TT--C--GTAGTCAATGTGCCCAGGTATCA-AAA--CTTGCT-GTTCAGT--GTAAAAGGAC-G-TA-CTATTCAAGCAA--AATTGAAGAAGTGGGTAAAGATCA-G-AAACAG-C-TATca
gi|6 : atcaacttacttgggaggccataccctagatgttgtgatagcgaggaattgcagctccatcgttaaaggtgaactatatgtataaaagacccagcactgcatgataaaaatggtcaccctgctggtgatcatctagcaatcttctcaagactttcaattttcaatatcaaaatcaacaagagagcgtaaaattgttagattcagaaaattacgtgatattgttattagtgaccttaataacattcgctcttctgtggaggtgcaaacttgtgaacctttcgtaatagaatcggtacaattttacaacataacacttaaaaacatgctagatgaaattgcacctgtacagTGTGTAC-ATTGAACTGTAGATTTACACGGAATAA--AACATTGTCCATCAATGAATTCATCAAGTCTAACAATGTCGACCTCA-TGGTGATG---ACAGAAA-CATGGCT--TGGTTCT-GA-GATA-GATAAATC-CAT---T-C--TAGC--CGTACTAAC--CCCAGAGGACTACATTGTCATC-CAGAA-ACCAAGA-TTAA-CACGTAA-AG-GTGGTGG-TCTG-CGGTCGTCCACAGT-AATACGA-TCAGCGTGAAGCCGATACG--CCAGGACGTTTCATACTCTCATTTTGA-ACATTTAGAGTGTTCTGTTAGCGTCAAAAATGAA------CA----TATCCGTCTCTGTGTCATTTATCGCCCACCACCATCTAAAGCAAAC-CA-TTTT-CGGAACTCG-TGTTTTTTTGAGGAATGGGC-A-CAATTTTTGGACAGCCTT----GTTATAACA--CCAGGGGAAGTTA-TAATTACT-GGTG-ATCTGAACTTTC--ACATAGACA-----ACACACA-GGAC-AA-CGACGCCAGGAAGTTCCTTGAGC-TGCTGGAAGA--CAG------GG-GAT-GT-CGCA-G-CA-TATTTGC--GAACCAACGCATATCCGG--GGTCAC-ATACTGGAC-GTTC--TCACAACCA----
gi|7 : -CAAGCTC-CTGTAAGATCTAAGGAGATAACT--GCGGCAAA--ATACACAGTGGTTCACTGATGAATTGCTAG-----CAGCCAAAAGAAAGCGTCGACAAACAGAGTGAAAAATGAGACGAA--TAAAACAGAGT--GTCCATA--GAAA-TTGTT--C------------TA---AAGTAACA-AAAATCTTGCT-A--AAAT--GC-AAGAAAGAT-TA-TTATGTTGGCAA--AATTCAAAACCTTGGAAACGATTAC--AAACAA-T-TATACAAAATCATTAATAGGCT--TATGGGAAATAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATG-----ATG-----AGCT--------------T-GCCAAAAAATTTTGCGATTTCTTT-TTA---GG-AAAAATTT------TTTTTTTTTTTTT--AGAGATGACCTAT-GT-CCAC--GTGGT-AC-GTCTCCA--CTATGGATGATTCACTACGAGCTGATGTTCAGTTTGTCG-GTTTTCCTCTAGATATCTTT-AACCCTGTGTCAGCCT-C-GGAA--A-TCCGC----AAA---ATTATCA-TGAAA-GCACCTCCAAAATCTTGCGAACTAGATCCAATTCCAACAAA-TCTGCTT-A-AGCAATGTTTGGA--CT--aaa
gi|8 : aa-----TCTTTATT----GG-AAAAATTCAGAAAA-----------TT--AGAAATCATCTAT-GT-T--C--CTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCACACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT----TCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-CGTTTTTGA-AACAATGTTTGGA--GT--GTG-TTTCA--CCAATTATCG-TCGAA--ATTATCAA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAA-C---GAATTTCA-AAAA-AG-TA-TTGTA----------CG--C--AT---TAATT-AAGCGTCAA---GGACTT--G-ACA-GGACGAATT-AAAAAA-----T-TACAGAC-TGTTTC---AAACTTACCTTTTCTA--TCTACAAT----ATTGGAAAAAGCGGTGGAAACTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTTACTCAACTGAAACGGCTCTA
gi|9 : taat-----TCTTTATT----GG-AAAAATTCAGAAAA-----------TT--AGAAATCATCTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAATGTGCTCTTTGAGCAGACGGAAAATTCGATG-GTATTCCATTAGAGATGTTT-GAGCCAGTTACAGTTT-CCG--A--GGTGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATAAGACCCGATACCCACTAA-CGTTTTG-A-AACAATGTTTGAA--GT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTATTAA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAA-C---GAATTTCA-AAAA-AGCTA-TTGTA----------CGGCC--AT---TGATT-AAGCGTCAA---GGACTT--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAATACGTAAACAC-T-TACCAGCTTCACGACCACGTGC---------ACCGAAA-TGTCACTC-ACTGAAACGGCTCTA
blockSeqs : G . C . . C A C G AG G A G T . C T . A . C . A T GT C T ATC C . . . AT G . GC GA A C C A A . C GTTT A AA . A AG T A . C T A A AC A A TAA . T TG . AT T A C CATTGCCATCTG T CG T C GAG T A . GA G C AG C G GA G GA A G C G C C AAAAAACAA G T C C T G C GA G T TAACTA G TT CTTGTTATTAAC A TATA TT TGG CTC A ATTCCA C AGGAAAAC G A TT A G G AT A TCTTGC A TAG A C A AAG A GGA C A A T TCTG AAAC CG C TT . AGAT T CATGG T CT C A TTGG G T AA C TA A A TCGCG A CC A CG GTACTTTGCTGTCTTTCAACAAACCTCAA AC A A A C A A AA C T AAATGAA GC C CCT A G A T GAAA A T GGA T A T T T A CA A C T T CA T CT A C GAACTTCGAG T C G C TT AG C T AG A T T G TT A TCAA TG T AT C GTT T AG A A C CG A A CA CC G C T ACG TA T G G GA CA G A A . TG G A TGATGAGCTTGCCAAAAAATTTTGCGATT TTATTG G CA TTTTTTTTTTT TA G T CCA AC T A TG AA TC T T CCGAGG CCAC ATAT T A AA A A G G TG T CTC CT . AGAC G TT AAA CA C G AA CTCG G . A GCGCATTGTA A CA CGA C A CAG TTA T TA AAAAA A T A CCA C C T TT TCCG A A TA C A A T C T
blockSeqs : . A . A . . . . . . . A . . . A . . . C A . . GTT . . . A AG T A . C T A A AT . . A . T . . T . . . TGCATC T . . . GG . . . G G C . C A G G . A G C G . C AAACC A T C . . . T AG G T ACAA T TT CTTGTTATAACA A ATG T TT GC A A C GGACAAAC G A TT . G A . A . . TGT . . A AAG A G G . A . TC . AT C T . TA T G . C C A TTG G T T . AA A A CAC . CC T A CGACTTGGCGTCGTTCAAACAACTTC A A A A C . A CA C . T . . . C G A T AG A T . T . . A A . GT T A G A . A AG T C GCTAGAG T C T C TT . C T . A T . . . A AAA TG T T C TA T . . A C A . A TG . A C T CG AT A A T GG . G A C . AA . C CATTGAACTGTGATCAAATTTGGTGAA TTA . CA A . G . TC A . A AA TC GA . . CCAAGG . A G . A C A . T T . A . . AC . . AAA . . . T CTCG . . . . A . . . T . A . A . . A T . C T G . . C . AG T . . T T T
blockSeqs : . A A . A . . T A . A . . . . . . . G . . . TCTAGC . . . . GA . . . G . . . . . A . . . . T G . C TGAA T A C . . . T AA G C ACAA C T TCATGTTATTG G TAA G AG TC T A T GGACAAC A G AT . C G . A . . ATA . . . C G T A . A . GA . CG C C . A G A . G G T TGG A C T . GT A G CAC . C C A . . . . . . . T . . T . . . . . . . A . . . . . . . T . CA A C T T . T CT A T TCATT G C A A CA . A A . G A . . . A AAT CT G C A A A . . A A T . G AA . T A C AC T A . T T . . . C . AA . C TGATGACTTGCCAAAAATTTTGCGATT ATT . CA A . G . C . . A AA TC TC . . CGGAAA . T G . T G A . G G . C . . AC . . CAA . . . T GAAT . . . . A . . . A . T . A . . A A . T T T . . C . A C . . T T T
blockSeqs : . A . T . T A . . . . T AA . C T T . A A ATA G GG T A G C AAAGA G C TT . T . . A . . GT . . . C C T T . T . GT . AT T T . A T G . T C A TTG A T T . AA A A AG . C C A . A . GT T A G A . A AG T C GCTAG G C G T AG . T A . A A . . . . AA CC A A . A G . . G G G . T TG . G T A AG C ATT . T A . C . T . . A TG AC TT . . CGGAAA . A G . T G C . G T . C . . G . . TAA . . . T GAAT . . . . G . . . T . A . T . . T A . T G C . . A . A C . . T . .
blockSeqs : . . . C AA . T ACT T TG C . A . AT . A A . G . . . . . . . . . T A G G . T . TC . AT T C . C A A . C T C TGA A T T . CT . . A . . . G . A . GT A T A A . T CG T T CATT G . A . AA . A A . . A . . . . . . A A . A A . . . A T . G . . T A C AC T TT . . A . C . C . . A TG AC GA . . CCGAGG . A G . A G C . T T . G . . . . . AA . . . A GAT . . . . A . . . A . A . A . . A T . T G T . . C . A . . . . . .
blockSeqs : . G . . . . . C G T A . A . GA . . . . . A A . . . . . TGG A A A . GT . . . T A . A . A AG . TT . . . . . . T . . . AA TC GA . . CCGAGG . T . . T C . . T G . G . . A CTC . . . . A . . . A . A . T . . T T . C G T . . C . A . .
blockSeqs : . . . T C T T . C . GT . . T . . . AT TT A . . AG . T . . T C . . . . . G . . . T . T . T . . A A . C T C . . A . A
blockSeqs : C A G T . A . TC . . . . . . . . T . T . A . . A T . . T C . . A . .
blockSeqs : . . . . . . . . . A . . . T . . . . . .
blockSeqCons : GAA******* CTGTTATCG********* ACG** NG* TC** TNN* TGG*** CAC*** NCTAN***** AN** ATTA*** NC CCGAGG***** NAA* NNNN***
originalCons : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTTATG-GTTAT--TA--CCGGGGGAAGT-A-TAATTACN-GGTG-ATCTGAACTT-C--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GAT-TA-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNG-T--G-CGGATCCTGGTN-TATGCG-ACAACAGNGGCAACATT---CG-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTGCATT-----CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTACG-AAACAA-T-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT-TT----GG-AAAAATTCAGAAAA-----------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-C-G--A--G-TGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTAT-AA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAN-C---GA-TTTCA-AAAA-AGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGNCAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
finalCons : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAAGAA-------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCCTGTTATCG---------CCGGGGGAAGTACG--ATTACN-GGNG-ATCTGAACTTTC--ACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GATTNN-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNGTGG---CGGATCCTGGTN-TATGCG-ACAACAGNGGCAACATTCAC---TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTNCTAN-----CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACTAN--AAACAA-T-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTTATTA---GG-AAAAATTCAGAAAA-----------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTNCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCCGAGG-----TGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NT--GTG-TTTCA--CCAATTATCG-CCGAA--ATTATNAA-CAAATCTTTTTC--AG-AATCGACGGTG-CCAN-CNNNN---TTCA-AAAA-AGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGNCAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): AAAGACGAAAACTCTGACATCTCAACCGAAAGCTTTACAGTATTGAGATATTGCTATAGATTTTACGAAGTGATCTATAATGGAGGTCAAGTGCTCTCCGCTACCACTAGAGCGAGTCTCCTGATGACACTT
Unaligned ( gi|25 ): AGGGTTTTCCTCTAGATATCTTTATTCCTGAGTCAGCCTCGGAAATCCACAAACTTATCATAAAAGCACCTCCAAAATCTTGCGAACTAGA
Unaligned ( gi|26 ): ACGAAAACATCCACCAAAGACTGCATTTCAAATTAACCGAAAAGTACTACTTATATACTAGTACTTTAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111
lowQualScore : 1 1 1 1 1 1 1 1 1 1 11 2222 1 1 11 1 2222 1 111 1 1 1 11 11 1 1 11 111 1 1111 22 11 1 11 1 1 222 1 11 1 22 1 1 1 33333333333333 11 1 1 111 1 1 1 11 11 11 22 5555555555 1 1 22222222222 33333333 333333 11111 111111 1111111111 1 222222222222222 1 111 11111 11111 333 77777777777777777777777777777777777777777777777 222 11 1 1 2222222 11 1 111 11111 111 1 1 1 2222222 1 11 1111 22 11 1 11 1 222222222222222222222222222222222222222222222222222222 222222 22222222222 11 1111 111 1111111111 11111
lowQualScore : 5 5 5 5 5 1 5 5 5 22 5 1 1 5 88 1 4444 5 5 77 1 3 7 7 6666 6 2 000 3 3 3 88 44 3 3 88 333 7 6 6 1 7 3 6 2222 00 88 0 3 55 3 3 33 2 3 3 3 99 0 0 777 0 3 33 0 00 0 0 0 33333333333333 3 33 0 0 0 111 0 0 0 22 2 2 33 2 6 66 2 55 3 2 3 3 0 8 3 0 4444444444 0 1 1 0 6 6 6 2 11 5 4 88888888888 88888888 222222 4 77777 77 888 1 6 3 777777 5 8888888888 3 1 44 6 1 2 99 3 444444444444444 5 5 0 333 0 1 777 1 4 1 4 8888 0 9999 66 4 99 5 00000 1 66666 5 88 1 3 5 1 3 66 0 5 22 1 7 000 6 777 1 77 77777777777777777777777777777777777777777777777 0 777 33 9 3 2 0 3 33 2 0 6666666 33 0 777 0 9 2 3 3 88888 3 3 777 3 0 0 3 1 6 22 1 1 6 0 0 1 77 1 11 1 6 3 0000000 1 6 3 5 22 99 1 1 99 6 1 6 6 99 7 8888 88 1 77 0 9999 1 99 6 1 1 77 6 2 00 99 1 1 2 1111 6 1 6 2 00 33 6 9 2 0 00 0 1 333333333333333333333333333333333333333333333333333333 777777 77 1 33333333333 77 6 5 9999 11 5 3 00 11 0 22 0 55 5 0 5 0 0 0 0 0000 9999 5 5 55 0 1 0 6 5 0 1 77 5 666 6 99 6 99 1 99 6 5 1 4444 5 1 4 7777777777 5 55 777 0 4 2 777 777 4 55 00000 4 0 3 1 777 4 2 3 55 8888 0 1 4 555 1 6 5 1 1 3
lowQualScore : . . . . . . . . . .. . . . . .. . .... . . .. . . . . .... . . ... . . . .. .. . . .. ... . . . . . . . .... .. .. . . .. . . .. . . . . .. . . ... . . .. . .. . . . .............. . .. . . . ... . . . .. . . .. . . .. . .. . . . . . . . . .......... . . . . . . . . .. . . ........... ........ ...... . ..... .. ... . . . ...... . .......... . . .. . . . .. . ............... . . . ... . . ... . . . . .... . .... .. . .. . ..... . ..... . .. . . . . . .. . . .. . . ... . ... . .. ............................................... . ... .. . . . . . .. . . ....... .. . ... . . . . . ..... . . ... . . . . . . .. . . . . . . .. . .. . . . ....... . . . . .. .. . . .. . . . . .. . .... .. . .. . .... . .. . . . .. . . .. .. . . . .... . . . . .. .. . . . . .. . . ...................................................... ...... .. . ........... .. . . .... .. . . .. .. . .. . .. . . . . . . . .... .... . . .. . . . . . . . .. . ... . .. . .. . .. . . . .... . . . .......... . .. ... . . . ... ... . .. ..... . . . . ... . . . .. .... . . . ... . . . . . .
lowQualScore : 0 5 0 0 5 0 5 0 0 00 0 0 0 5 00 0 5555 5 5 55 0 3 3 3 3333 7 0 000 3 3 3 33 77 3 3 33 000 3 7 7 0 3 3 7 0000 77 33 0 2 88 2 2 88 5 2 2 2 88 0 0 555 0 2 88 0 55 0 0 0 22222222222222 2 88 0 8 0 000 0 0 0 55 5 5 88 5 5 55 5 00 2 5 2 2 8 0 2 8 6666666666 8 0 4 0 7 7 7 3 66 0 0 44444444444 00000000 222222 6 22222 77 333 0 7 5 333333 2 3333333333 7 5 55 7 0 0 22 2 777777777777777 0 0 0 111 9 0 888 0 4 0 4 1111 1 4444 11 0 77 7 11111 0 11111 7 77 7 0 7 4 9 77 4 7 77 4 1 222 7 555 0 33 00000000000000000000000000000000000000000000000 2 000 22 8 2 5 0 2 55 5 0 0000000 88 0 555 8 2 5 2 2 55555 2 2 555 2 0 0 3 0 7 00 0 0 6 4 4 0 99 0 44 0 3 7 5555555 0 7 7 2 00 22 0 0 22 0 0 7 7 22 3 2222 88 0 77 8 3333 0 22 7 7 0 77 7 2 00 22 0 0 2 8888 7 0 5 5 00 88 5 8 5 0 55 0 0 666666666666666666666666666666666666666666666666666666 000000 99 4 66666666666 99 6 0 9999 99 0 2 55 99 8 44 8 99 0 8 0 5 8 9 2 6666 8888 6 0 88 8 0 8 6 7 7 3 00 7 777 7 22 7 22 0 22 7 0 0 0000 0 0 4 5555555555 3 55 000 3 0 4 000 999 0 44 00000 0 8 7 4 000 8 1 9 55 5555 1 7 4 333 0 7 7 4 5 2
consensus : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-AAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATTTTTGGACAGCC--TT----GTTATAACG--CCGGGGGAAGT-ATN-ATTACN-GGTG-ATCTGAACTT-TCACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GATTG-CGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNG-TGGCGGATCCTGGTN-TATGCG-ACAACAGNGGCAACATTCA-TGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGANCTNCTAN--CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACT-AN-AAACAAT-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT--ATTGGGAAAAATTCAGAAAA-----------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTTCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCCGAGGTGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NTGTG-TTTCA--CCAATTATCG-CCGAA--ATTATCAACAAATCTTTTTC--AG-AATCGACGGTG-CCANCCNATTTCA-AAAAAGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGNCAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
Reference ( family-4004 ) : TTCGTGAAGGGAGGGTTTCAGGTCACAGATACCGTTCCACGCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCNGGGACACACAGGGTTGTGACCGGAANNTGTGGAAGANTNGATGCATCCTTAAACAACTACNGGGTGTAAAATGATAATAATCATCATATCATTGTGAGGGCACTNTTGATCAC-GCGGATCATTGCCATCCATATCAGG-GTATTACCACATATCCTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCTNCAAATTCACATAATTGA-GGTTCCAAAAGTTTAAAACA-ACTAGGACCAT--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAACAACATCGATCTAA-TGGTT-TT---ACTGAAA-CATGGCT--AGGATCT-GATNACA-GATAA-TT-CAT---TGC--T--C--CGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAGGGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAG-TTAGTGTGAGGCCG-TGTGAACAAGGATACCATGTACTCGCATTTTGA-ACACCTAGAGTGCTCTGTTGATGTAAAAAA-GAA------CAACTTTTTTCGNCTTTGTGTTATATATCGCCCACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCGATGTTTCTTTGAAGAATGGGCTA-CNATNTTTGGACAGCC--T-----GTTAT--CG--CCGGGGGAAGT-ACG-ATTACN-GGNG-ATCTGAACTT-TCACCTAGACG-----ACACGCA-GGAC-AA-CGACGCCAGGAAGTTCCNTGAGC-TNCTGGAAGA--CAG------GG-GATTNNCGCA-G-CA-TATTTGC--GAACCAACGCATNTCCGT--GGNCAC-ACNCTGGAC-GTGC--TCATAACCA----GGGATGACAG-CCC-A-A---TNTTGC----GTGG-AAC-CCTCTNG-TGGCGGATCCTGGTN-TATGCG-ACAACAGNGGCAACATTCACTGG-AGA-C-ACCTCGC-GATTC---------GC---------------------CCTCCA---------CCGGAGAGGAAAAA--TGTAA-CTATTCCGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CANGCCC-CTNNGAGATCNAAGGAGATNACTNTGCGGCCNA--ACACNCCGTGGTTCACNGACGATCTNCTAN--CTGCCAAAAGAGANCGTCGAAGGGCGGAGCGGANNATGAGAAGAA--CNAAACTGNCT--GTCCACAAGGANA-TT-TT--CAAGGAG-AAATGTACGCAGGTNACN-AAACTCTTGCT-A--CANT--GC-AAAGNACAN-TA-TTACGCCGGCAA--AATTCAGGAATTNGGCAACGACT-AN-AAACAAT-TATNCAAGATCACGAACANGCT--TATGGGGAAAAAAGATGATTCCGTCTTGCCG-GAACATA-ANAGCGACG-----TTG-----AACT--------------T-GC-----------G-----TCTTT--ATTAGGAAAAATTCAGAAAA-----------TT--AGAGATNACCTAT-GT-C--C--TTCGA-ACAGTTTCCCTTCTATGGAAGGTGCTCTNCGAGCAGACGGAAAATTCGACG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCCGAGGTGAGT----GAN---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCNAATTAGACCCGATACCNACTAA-CGTTCTT-A-AGCAATGTTTGGA--NTGTG-TTTCA--CCAATTATCG-CCGAA--ATTATNAACAAATCTTTTTC--AG-AATCGACGGTG-CCANCNNNNTTCA-AAAAAGCTA-TTGTA----------CGACC--AT---TAATT-AAGCGNCAA---GGACTN--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTCCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|1 : TTCGTGAAGG-AGGGTTTCAGGTCACAGATACCGTTCCA-GCCGCACAAGGCGCCGGAACCAAGGCAGGTCGGAAAAGTTATCAGAGAC-CA-AGGGTT-TGACCGGAATTTGTGGAA-ATTTGATGCATCCT-AAACAACTACGGGGTGTAAAATGATAATAATCATCAT-TCATTGTGAGAGCACTATTGATCACCGCGG-TCAGGGCCATCCATATCAGGCGTATTACCACATATTCTA-CCGAAACGGTTTCCTGAATGAGCCAACCGTGAAGCT-TCCCGATACGAAT-TCAACACACGG--AAAGAAAATTGACGAATCTAGATCGTCGAAATATATCCAAACTTGCCTCAAATTC-CATAATTGATGGTTCCAAAA---TAAAACACACTAGGACCAT--ATCCCTGTGTGCGTTTGA-TTGT-GATCTTCTAGAA-TAATCATCATTGTCCATCAACGAT-ACATCC-GTCTAACA-CATCGATCTAA-TGGTT-TT---ACTGAAAACATGGCT--AGGATCTTGATAACA-GATAA-TT-CAT---TGC--T--C--TGAATTAAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAAAGACTGA-CACGTAG-GGCGTGGGG--TCTGGCGATTGTCCAC--TCAAAGCA--TTAGTGTGAGGCCG-TGTGAACAAAGATACCAT-TACTCGCATTTTGA-ATAC-TAGAGTGCTCTGTTGATGTAAAAAA----------CAACTTTTTTCGACTTTGTGTTATATATCGCC-ACCGCCATCAAAATCAAAC-AA-TCTC-CGGAATTCAATTTTTCTTTGAAGAATGGGCTA-CC-TATCTGGACAGCC--TTATGTGTTAT--TG--CCTGGTGAGGT-ACTTATCACG-GG-G-ATCTCAA-TT-TCATCTAGATG-----ATCCGAA-AAACCAG-AGATGCTAGAGCGTTGACAGAAC-TTTTAAAAGA--TCG------TG-GATTA-CGCA-G-CA-TATTTCT--GATGCAACACATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCCGA-A---TATTAC----ATGG-AAC-TCTTTCG-TG-CAGA-ACTGGTA-TATGTG-ACAACAGTGGCAACATTTG-TGG-AGA-C-ACCTTGC-AATTC---------GT---------------------CCTCCA---------CCGGAGAAGAAAAAATTGTAAACTTTTCGGAAAGTTGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAAGAACATCCGCTGAAAAACTTGCTGTGC---A-CTACAATA---CCGTTTTACAAAC-TACCATCAA-TTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGA-GATCTC--AT--TTGCCAAAAGAGATCGT-GAAGGGCTGAACGGATTAAGAGAAGAA--CGAAACTGTCT--GTCCACATGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGC--A--CATT--GT-AAAGCACAG-TA-TTACACCAACAA--AATTCAGGAATTAGGCAATGACTCGA-AAACAAT-TATTCAAGATCACGAACAT-CT--CATGGGGAAAACCAATGTTTCAGTCTTGCCGTG--CATG-AAAACGAAC-----TTG-----AACT--------------T-GC-----------A-----TC------------AAAATTCAGAAAA-----------TT--AGAAATCATTTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTT-GAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTT-CGA-GTGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-TGTTTTG-A-AACAATGTTTGGA--GTGTGTTTTCA--CCAACTATCG-CCGAA--ATTATC----AATTTTTTTC--AG-AATCGACGGTG-CCAACGAATTTAA-AAACATCTA-TTGTA----------CGGCC--AT---TAATT-AAGC-TCAA---GGACTT--G-ACAAGGACGAAAT-TAAAAA-----T-TACA-ACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAAT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTC---ACCACGCGCAGTCTGCCTACCGAAATTGTCACTCAACTGAAACGGCTCTAT
gi|10 : TTT---TTGGGAAAAG----GAA--------------T--AGAGATGACCTAT-GT-C--CA-TTCGGTACA--TCTCCATCTATGGATGATTCACTAAGGGTTGATGTCCAATTTGGCG-GTTTTCCTCCAGATATCTTT-AATCCCGTCTCAG---CCTAGG-GAATCCACAAA---ATTACCATGG-AA-GCACCTCCAAAATCTTGCAAACTAGATCCAATTCCAAACAA-TCTGCTT-A-AGCAATGTTTGGACTCTCTG-CTTCG----AATTATTA-CTGAA--ACCATAAACAGATCATTTTC--AA-ACTCAACAGTG-
gi|11 : TCTAAAGCAAAC-CA-TTTGGCGGAACT-GATGTTTTTT--AAGAATTGGCT--------------------T-----GTTATAACA--CCAGGGGAATT-ATG-ATTACTTGGTGGATCTGAACTTCTCACCTAGACA-----ACACACAAGGAA-AA-CGACGTCAG-AAGTTCCTTGAGC-TGCTGGAAGA--CAG------GGAAACTAGCGCA-GCCA-TATCTGC--GAACCAACACATATCCGGGAGGCTACAATACTGGAC-GTTCTGTTATAACCAAAACAGG--GACAGTTCC-A-A---TTTTGT-----TGT-AGC-CCTCTAG-TTGTGGATCCGGATT-TATGCG-ACAACATAGGCAAC-TCCACTGGAAGA-C-CATTCGC-AATTG---------GC---------------------GCTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaagcggaagcatctcgattggacaaacaccttgatata
gi|12 : ----------CGACCCAATCGATAATTCAAGCGACAACAGGGTCTA--T-ACAAAGACGAATT-AGAATA-----A-TGCTGTCCGGTATCCCAAGA---ACTCTTCTTATTTCTAAAGTTCCGGTTCGAAAAactgcttaaacttcaccaagcctcccaggaaagccgaa
gi|13 : gaaatccgaaaaattatcatgaaagcactctcactgcaaatcgtgcgacaccattaccaatgtccaaactagtcatgcaccggagatcgaagtgaagaagctctgcgctccattactactaagctcgaataaagtccagccgtttctatgtcattattacaagctagaaatcgttctagattactcttagttcttagccattagtctctccgttaagaatgatgcatatctcatAAGTT-TCCGGGACACACAGGGTTGTAACCGGAAAGTGTGGAAGAATGGATGCATCCTTAAACAA--ACCGGGT-T--AATGATAATAATC-TCATATCATTGTGAGG--ACTCTTGATCAC-GCGGATCATTGCCATCCATA-CAGG-GT-TTA-CA-ATATCTTACCCGAAACGGTT-CTTGA-TGGAGCA--CGTGAAGCTA-CCCGATACTGATGTCAACA-ACGG--AAACAGAATTGAC--ATCC-GAT-GTCGAAATATGTTCAAACTTGCTACAAATTCACATAACTGA-GGTT--AAAGGTTTAAAAT---CTAGGACCATAAATCACTATGTGC-TTTGAATTGTA-ATC-TCTAGAAATAA--ATCATgtaac
gi|14 : GGAA--CAGTGTTT-TTTGAGGAATGGGC-A-CAATTTTTGGACAGCC--TT----GTTAT--TAACCCAGGGGAAGT-TAA-ATTACT-GGTT-ATCTGAACTT-T-ACCTAG-CA-----ACACACA-GGAC-AAACGACGCCAGGAAGTTCCTTGAGC-TGCTG--AGA--CAG------GG-GAATGTCGCA-G-CA-TATTTGC--GAACCAACACATATCCGG--GGGCAC-ATACTGAGC-GTTC--TCATAACCA----AAACGGACAG-TCC-A-A---TTTTGC----GCGG-TAG-CCTCTAGTTGGTGGATCCTGGAT-TATGCG-ACAACAAAGGCAAC-TCCACTGA-AGACC-ATTTCGC-AATTC---------GC---------------------C
gi|15 : ttttTCAGAAAAAGCTAATTGTA----------CG-CC--AT---TAATT-AAGCGTCAA---G-ACTT--GTACAAGGACGAATT-AAAAAAAAAAAT-TACAGACCTGTTTC---AAACTTACCTTTC-TA--TCTAAAA-----ATTGGAAAAAGCGGTGGCAGCTAGACT-TGTA-AAAACACAT-AACAC-T-TACCAGCTTCACGACAACGTGCAATCTGCTCACCGAAATTGTCACTCAACTGAAACGGCTCTAactg
gi|16 : GGAGCATT-ATA-ATAACG-GGAG-ATTTGAACCT-GCATCTTGACATTCCAACATGTA-------A-TGACACGATGAGGTTCAAT-AGTATCCTG-------CAGTCTTGCGG-CAT----GCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----G
gi|17 : agattggccgaagtttttagcagactgcgctacaacagataAAAAGCTG-TTGTA----------CGACC--AT---TAATT-AAAC----------AC-------CAAGGATGAATTTAAAAAA-----TATACAGACCTGTATC---AAGCTCACATTTTGTA--TTTAAAAT----ATTGGGGAAAACGGTGGCAGCTCGACT-TT-AGAAAACATCTAAATGC-TAAATCATATTTATGACCTTGTGCAA-------ATCA----TGTCA--CA---GGAACGGCTCTAa
gi|18 : TCAACAGTG-CCATCCTCGTTTA-AGAATGTCA-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAATT-TAAGAA-----T-TATCGTCTGGTATC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACAC
gi|19 : AT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCAGACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCCGAGGTGAGT----GAT---ATTATCAGTG-AT-GCACCAACAAAGTCCTGCCAATTAGACCCGATAC
gi|2 : GTCCAT-AACGATTACATTCAGTCCA-CAA-ATCGATATAAATGGTT-TTTAAACTGAAA-CA-GGCTTGAGTAGCT-GAATACATGATAA-TT-CATCATTGCCAT--CTGCGAAT-AACCGACCAGATGGGAAGCATTTCATTTCACAACACCAAGAGCTGATCACGTAGAGG-GTGGGGGATCTGGCGATTGTA-AT--TCAAA-CAG-TTAGTGTAAA-CC--TGTGAACAAG-ATAC-ATGTAC-CGCATTTTGACACACCTAGA-TGCTCTGTTGATGTAAAA------------CAACTTTTTTTCGCTTTGTGTTATAATTCGCC-ACCGCCATCAACATCAAACCAA-TCTC-CGGA-TTCAAT--TTTTTTGAA--ATGGGCTAACTATCT---GACAGCTCAT-----GTTAT--TG--CTGGTGAGAGT-ACT--TTACG-GGGG-ATC---ATTT-TCATCT-GATG-----ATCCG-A-AAAG-A---GATTCTAGAGCGTTTCA-GAAC-TTTTAAAAGAATC-G------TG-GATATAAGCAAG-CA-TATTTCT--GATGCAAATAATCTTCAT--GGTCAT-ACT-TAGATTGTGT--CGATAAC-A----GGGATGA-AG-CCC-ATA---TGTTAC----ATGC-AAT-CCTGTTG-TGGCAGACCTTGGTAATATGTGCACAAACGTTGCA-CATT-A-TGG-AGA-C-ACCTTGCCGATTCCGACTTGGCGT---------------------CGTTCAAACAACTTCCCGGAGAGGAAAA---TGTA--CTATTTCGAA-GTTGAC-GAAATTGACATACAGCAATTTAAAAAGAGAC-TG-GATTT---T---TCGAGT--TTATTCACAC---AAAGAAAC-TCC--TGAAAAACTTGCTGTGCGAAA-CT-CAA-A---CCGTTTTACAAAC-TACCATCAA-TTTTCATGCCCACTCAGAAATCAAAGGAGATCATTTTACGACCTACAACACTCCTTGGTTTACAGACGATCTCAT-T--CTGCCAAAAGAGATCGT-GAAGGGTGAAG--GATTATGAGAAGAAAGCCAAACTGTCTAGGTCCACAAGGATA-TT-TTTTCAAGGAG-AA-TGTATGCAGTTTACATAAACTCT-GCTTA--CATTAGGC-AAAGCACACGTAATTACAC----AACCAATTCAGGAATTGGGCAATGACT-ACGAAACAATATATTCAAGATCACGGACAT-CTCATATAGGGAAACAA--TG-TTTAGTCTTGTCG-GTGCATAGAAAACGACA-----TTG-----AACTGTGATCAAATTTGGT-GA-----------A-----TCTTTTTATTGGAAAAAATTCAGAAAA-----------TTTAAGAAAT-ATCAATTGTTC--C--TTCAA-ACAGTT--CCTT-TATGGAAAGTGCTCTTCGG--AGACG-AAAATTCGATG-GTATTC-ATTAGAGGTGTTTTGAGC-AGTTACAGTTTCCAAGGTGAGT----GAATATATCA--AGTG-AT-GCGCCAACAAAGT---GCGCATTAGACCCGATACC--CTAAGCGTTTTG-ATAACAATTGTTGGA--ATGTG-TTTCAGACCAATTATCGGCCGAATTATTA-CAACAAATCTTTTTTCAAGCAATCGACGGTGGCCAAACGATTTCA-GAAAAGCTA-TTGTAGCGCATTGTACGGTC--AT---TAATT-AAGCGT-AA---GGACTTTAG-ACAAGGACGAATT-AAAAAA-----T-TACAGACATGTTTC---AAA-TTA---TTTCTA--TCTAAAAT----ATTGG-AAAAGCGGTGGCAGCTA-ACTATG-----AACACATAAA-ACAT-TACCAGCTT-ACGACCAC-TGCAATCTGCCTACGAAAGTTGTCACTCAACTGAAACGGCTCAAT
gi|20 : CGCA-A-CA-TATTTGC--TAACCAACGCACATCTGG--AGGCAC-ATTCTGGAC-GTTC--TCATTTCCA----AAACGGACAG-TCC-A-C---TTTTGC----GTGGTAGC-CCTCTAG-TTGTAGATCCTGGCT-TATGCG-ACAACAAAGGC--CATT----------------TCGC-AATTC---------GC---------------------TC
gi|21 : gtGCA-G-CAACATGTGAAGGAACCAACGCATGTCCGT--GGACAT-ACACTAGAC-GTGA--TCATCACCA----GAGATAATGA---C-A-AGATTATTTCCATGGTAG-AA--------G-TGACAGATCCTGGTT-TATCAG-ACGGTTCTGGCAATGTTactgcttaact
gi|21 : gcatTGATCAC-GCGAAACATTGCCAtcgcgtgatcatttcgcagt
gi|22 : gcatgcagcaacatgtgaaggaaccaacgcatgtccgtggacatacactagacgtgatcatcaccagagataatgacaagattatttccatggtagaagtgacagatcctggtttatcagacggttcCAACAGTG-CCATCCTCTTTTA-AGAATTC-A-TTGTT----------CGACA--AC---TTATC-AAGCGACAA---GGGCTA--G-TCAAAGACGAATT-TAAGAA-----T-TATCG-TCTGGTAC---CAATTTACCGTTCTTA--TCTAAAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-CAAACACtttcgcagt
gi|23 : ACCATGTACTCGCATTTTGA-ACACCTAAAGTGCTCTGTTGATGTAAAAAA-AAAAAACAACAACTTTTTTCGACTTTGTGTTATATTTCGCCCACCGCCATCAAAATCAAAC-AATTCTC-CGGAATTCAAT-TTTCTTTGAAGAAc
gi|27 : -CAAGCTC-CTGTAAGATATAAGGAGATACCTGTGCGGCCAA--ATACACAGTGGTTCACTG
gi|28 : tcgataaa-TACCAGCTTCACGACCACGTGCAATCTGCC
gi|3 : TTCGTGAAGGGAGGGTTTC-GGTCACAGATACCGTTCCACGCCGCACAAGGCG-CGGAACCAAGGCAGGTCGGA
gi|3 : TGCCATCCATATCAGG---ATTACCATAT---CTA-CCGAAACGGTT-CCTGA-TGAGCCA--CGTGAAGCTATCCCGATACTGAT-TCAACA-ACGGGCAAAGAAAATTGACGA-TCTAGATCGTCGAAATATATC-AAACTTGCTCAAAATTCACATAATTGA-GGTTCCAAAAGTT-AAAACA-ACTAGGACCAC--ATCACTGTGTGC-TTTGAATTGTAGATCTTCTAGAAATAA--ATCATTGTCCATCAACGATTACATCCAGTCCAAAAACATCGATCTAA-TGGTT-TTA--ACTAAAA-CATGGCT--ATGATCT-GAT-ACA-AATAA-TTCCAT---TGCA-T--C--TGAATTTAC--ACCAGATGGGTACAATTTCATT-CATAA-ACCAA-GGCTGA-CACGTAG-GG-GTGGGGG-TCTGGCGATTGTCCAC--TCAAAGCAGATTAGTGTGAGGCC--TGTGAACAAAGATACCATGTACTCGCGTTTTGA-ACACCTAGAGTGCTATGTTGGTGTAAAAAA-AAACC----CAACTTTTTTCGTCTTTGTGTTATATATCGCCCACCGCCGTCACAATCAAAC-AA-TCTC-CGGAATTCAAT-TTTCTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|3 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngATTTCT--GATGCAACTTATCTTCAT--GGTCAT-ACCTTAGAT-GTGT--TGATAACCA----GGGATGATAG-CCC-A-A---TATTGC----ATGG-AACTCCTTTCG-TGGCAGAACCTGGTA-TATGTG-ACAACAGTGGCAACATT-AGTGG-AGA-CCACCTTGC-GATTC---------GTACTTTGCTGTCTTTCAACAAACCTCAA---------CCGGAGAGGAAAAA--TGTAA-CT-TTCCGGAAATGGACCGAAATTGACAT-CAGCAATTTCAAAAGAGACCTG-GATTT---T---TCGAGT--TTATT-ACAC---AAAGAAACATCCGCTGAAAAACTTGCTGTGC---A-CGACAATA---CTGTTTTACAAAC-TACCGTCAATTTT-CATGCCC-CTCAGAAATCAAAGGAGATCATTTTACGACCTA--ACACTCCTTGGTTTACAGACGATCTTCATT--CTGCCAAAAGAGATCGTCGAAGGGCTGAACGGATTATGAGAAGAA--CCAAACTGTCT--GTCCACAAGGATA-TT-TT--CAAGGAG-AAATGTATGCAGGTTACT-AAACTCTTGCT-A--CATT--TT-AAAGCACAA-TA-TTACACCAACAA--AATTGAGGAATTAGGCAATGACT-CG-AAACAAT-TATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatttctgatgcaacttatcttcatggtcataccttagatgtgttgataaccagggatgatagcccaatattgcatggaactcctttcgtggcagaacctggtatatgtgacaacagtggcaacattagtggagaccaccttgcgattcgtactttgctgtctttcaacaaacctcaaccggagaggaaaaatgtaactttccggaaatggaccgaaattgacatcagcaatttcaaaagagacctggatttttcgagtttattacacaaagaaacatccgctgaaaaacttgctgtgcacgacaatactgttttacaaactaccgtcaattttcatgcccctcagaaatcaaaggagatcattttacgacctaacactccttggtttacagacgatcttcattctgccaaaagagatcgtcgaagggctgaacggattatgagaagaaccaaactgtctgtccacaaggatattttcaaggagaaatgtatgcaggttactaaactcttgctacattttaaagcacaatattacaccaacaaaattgaggaattaggcaatgactcgaaacaattat
gi|4 : ttcgtgaagggagggtttcggtcacagataccgttccacgccgcacaaggcgcggaaccaaggcaggtcggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgccatccatatcaggattaccatatctaccgaaacggttcctgatgagccacgtgaagctatcccgatactgattcaacaacgggcaaagaaaattgacgatctagatcgtcgaaatatatcaaacttgctcaaaattcacataattgaggttccaaaagttaaaacaactaggaccacatcactgtgtgctttgaattgtagatcttctagaaataaatcattgtccatcaacgattacatccagtccaaaaacatcgatctaatggttttaactaaaacatggctatgatctgatacaaataattccattgcatctgaatttacaccagatgggtacaatttcattcataaaccaaggctgacacgtaggggtgggggtctggcgattgtccactcaaagcagattagtgtgaggcctgtgaacaaagataccatgtactcgcgttttgaacacctagagtgctatgttggtgtaaaaaaaaacccaacttttttcgtctttgtgttatatatcgcccaccgccgtcacaatcaaacaatctccggaattcaattttcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnna---------------------CCTCC----------CAGGAAGCGAAAAAC-TGTGA-CCATTCCGAAAGCTTTCCAGTATTGATAT-T-GCTCTTTT------TACCTGTGATCTAAATGAATCGAGTGCTCTCC-GCACCCTAGAGCGGTCTCTGCTGAA---CTTACTG-AC---AGTTACAATAGGACCCT----CAAACAGACCATCGA-TAAACAAGCTC-CTGTAAGATCTAAGGAGATAACTGTGCGGCCAA--ATACACAGTGGTTCACTGATGAGTTGCTAGAGCAGCCAAAAGAAAGCGTCGACAAACAGAGCGAACAATGAGACGAA--CAAAACTGAGT--GTCCATAGAGAAA-TT-TT--TAAGGAA-AATTGTTCTAAAGTGACC-AAA-TCTTGCT-A--AAAT--GC-AA-GAAGAT-TA-TTATGTTGGCAA--A-TTCAAGAACTTGGAAACGATT-AC-AACAAAT-TATACAA-ATCATTAATAGACT--TATGGGAATAAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATGATGACTTGCCAAAAATT--------------TTGC-----------GATT--TCTTT---TTGGGAAAAATT--AAAAA-----------TT--AGAGACGACCTAT-GT-C--CACCTGGT-AC-GTCTCCAT-CTATGGATGATTCATTACGAGCTGATGTCCAGTTTGCCGTGTGTTCCTCTAGATGTCTTT-AATCCTGTGTCAGCCACGGAAATCCGA----AAA---ATTATCA-TG-AAAGCACCTCCAAAACCTTGCGAACTAGATCCAATTCCAACTAA-TCTGCTT-A-AGCAATGTTTGGACTCTGTG-CTT----CCTATTATTA-CTGAA--ATCATAAACAGATCATTATC--AA-ACTCAACAGTG-CCATCCTCGTTTA-AGAATGCAA-TTGTT----------CGACC--AC---TTATC-AAGCGACAA---GGGCTA--G-ACAAAGACGAATT-TAAGAA-----T-TATCGTCCGGTATC---CAATTTACCGTTCTTA--TCT-AAGT----CCTTGAAAAAGCGGTAGCATCTCGATT-GG-A-
gi|5 : gTCAAAGGTGACTACCATCCACCCAG--ACTGTCCGTGGTACCCATCTGAACTTCGAG--CTGCCAAAAGGGAGCGGCGAAGGGCGGAGAGGCAGATGCGTAGGA--CTCGTTTGACT--GTCCATCAGGAAATTT-TT--C--GTAGTCAATGTGCCCAGGTATCA-AAA--CTTGCT-GTTCAGT--GTAAAAGGAC-G-TA-CTATTCAAGCAA--AATTGAAGAAGTGGGTAAAGATC-AG-AAACAGC-TATca
gi|6 : atcaacttacttgggaggccataccctagatgttgtgatagcgaggaattgcagctccatcgttaaaggtgaactatatgtataaaagacccagcactgcatgataaaaatggtcaccctgctggtgatcatctagcaatcttctcaagactttcaattttcaatatcaaaatcaacaagagagcgtaaaattgttagattcagaaaattacgtgatattgttattagtgaccttaataacattcgctcttctgtggaggtgcaaacttgtgaacctttcgtaatagaatcggtacaattttacaacataacacttaaaaacatgctagatgaaattgcacctgtacagTGTGTAC-ATTGAACTGTAGATTTACACGGAATAA--AACATTGTCCATCAATGAATTCATCAAGTCTAACAATGTCGACCTCA-TGGTGATG---ACAGAAA-CATGGCT--TGGTTCT-GA-GATA-GATAAATC-CAT---T-C--TAGC--CGTACTAAC--CCCAGAGGACTACATTGTCATC-CAGAA-ACCAAGA-TTAA-CACGTAA-AG-GTGGTGG-TCTG-CGGTCGTCCACAGT-AATACGA-TCAGCGTGAAGCCGATACG--CCAGGACGTTTCATACTCTCATTTTGA-ACATTTAGAGTGTTCTGTTAGCGTCAAAAATGAA------CA----TATCCGTCTCTGTGTCATTTATCGCCCACCACCATCTAAAGCAAAC-CA-TTTT-CGGAACTCG-TGTTTTTTTGAGGAATGGGC-A-CAATTTTTGGACAGCC--TT----GTTATAACA--CCAGGGGAAGTTATA-ATTACT-GGTG-ATCTGAACTT-TCACATAGACA-----ACACACA-GGAC-AA-CGACGCCAGGAAGTTCCTTGAGC-TGCTGGAAGA--CAG------GG-GA-TGTCGCA-G-CA-TATTTGC--GAACCAACGCATATCCGG--GGTCAC-ATACTGGAC-GTTC--TCACAACCA----
gi|7 : -CAAGCTC-CTGTAAGATCTAAGGAGATAACT--GCGGCAAA--ATACACAGTGGTTCACTGATGAATTGCTAG--CAGCCAAAAGAAAGCGTCGACAAACAGAGTGAAAAATGAGACGAA--TAAAACAGAGT--GTCCATA--GAAA-TTGTT--C------------TA---AAGTAACA-AAAATCTTGCT-A--AAAT--GC-AAGAAAGAT-TA-TTATGTTGGCAA--AATTCAAAACCTTGGAAACGATT-AC-AAACAAT-TATACAAAATCATTAATAGGCT--TATGGGAAATAAAGATGATTCCATTTTGCCA-GAACATA-ACAGTGATG-----ATG-----AGCT--------------T-GCCAAAAAATTTTGCGATTTCTTT---TTAGGAAAAATTT------TTTTTTTTTTTTT--AGAGATGACCTAT-GT-CCAC--GTGGT-AC-GTCTCCA--CTATGGATGATTCACTACGAGCTGATGTTCAGTTTGTCG-GTTTTCCTCTAGATATCTTT-AACCCTGTGTCAGCCTCGGAAATCCGC----AAA---ATTATCA-TGAAA-GCACCTCCAAAATCTTGCGAACTAGATCCAATTCCAACAAA-TCTGCTT-A-AGCAATGTTTGGA--CTaaa
gi|8 : aa-----TCTTT--ATT-GGAAAAATTCAGAAAA-----------TT--AGAAATCATCTAT-GT-T--C--CTCAA-ACAGTTTCCCTTCTATGGAAAGTGCTCTTCGAGCACACAGAAAATTCGATG-GTATTCCATTAGAGGTGTTT-GAGCCAGTTACAGTTTCCGAGGTGAGT----GAT----TCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATTAGACCCGATACCCACTAA-CGTTTTTGA-AACAATGTTTGGA--GTGTG-TTTCA--CCAATTATCG-TCGAA--ATTATCAACAAATCTTTTTC--AG-AATCGACGGTG-CCAACGAATTTCA-AAAAAG-TA-TTGTA----------CG--C--AT---TAATT-AAGCGTCAA---GGACTT--G-ACA-GGACGAATT-AAAAAA-----T-TACAGAC-TGTTTC---AAACTTACCTTTTCTA--TCTACAAT----ATTGGAAAAAGCGGTGGAAACTAGACT-TG-A-AAAACACATAAACAC-T-TACCAGCTTCACGACCACGTGCAATCTGCCTACCGAAATTGTTACTCAACTGAAACGGCTCTA
gi|9 : taat-----TCTTT--ATT-GGAAAAATTCAGAAAA-----------TT--AGAAATCATCTAT-GT-T--C--TTCAA-ACAGTTTCCCTTCTATGGAATGTGCTCTTTGAGCAGACGGAAAATTCGATG-GTATTCCATTAGAGATGTTT-GAGCCAGTTACAGTTTCCGAGGTGAGT----GAT---ATCATCAGTG-AT-GCGCCAACAAAGTCCTGCCAATAAGACCCGATACCCACTAA-CGTTTTG-A-AACAATGTTTGAA--GTGTG-TTTCA--CCAATTATCG-CCGAA--ATTATTAACAAATCTTTTTC--AG-AATCGACGGTG-CCAACGAATTTCA-AAAAAGCTA-TTGTA----------CGGCC--AT---TGATT-AAGCGTCAA---GGACTT--G-ACAAGGACGAATT-AAAAAA-----T-TACAGACCTGTTTC---AAACTTACCTTTTCTA--TCTAAAGT----ATTGGAAAAAGCGGTGGCAGCTAGACT-TG-A-AAAATACGTAAACAC-T-TACCAGCTTCACGACCACGTGC---------ACCGAAA-TGTCACTC-ACTGAAACGGCTCTA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|24 ): AAAGACGAAAACTCTGACATCTCAACCGAAAGCTTTACAGTATTGAGATATTGCTATAGATTTTACGAAGTGATCTATAATGGAGGTCAAGTGCTCTCCGCTACCACTAGAGCGAGTCTCCTGATGACACTT
Unaligned ( gi|25 ): AGGGTTTTCCTCTAGATATCTTTATTCCTGAGTCAGCCTCGGAAATCCACAAACTTATCATAAAAGCACCTCCAAAATCTTGCGAACTAGA
Unaligned ( gi|26 ): ACGAAAACATCCACCAAAGACTGCATTTCAAATTAACCGAAAAGTACTACTTATATACTAGTACTTTAT