lowQualScore                  :            22                11111111111                        333333333333                                                                                                         
lowQualScore                  :            44     3  3       55555555555  66666666    555   44  444444444444  3    5 2 2   2   2  2   2 5   2  2   2 444    33   2  2      2  2 33                555 2   8     3    
lowQualScore                  :            ..     .  .       ...........  ........    ...   ..  ............  .    . . .   .   .  .   . .   .  .   . ...    ..   .  .      .  . ..                ... .   .     .    
lowQualScore                  :            66     1  1       55555555555  44444444    444   22  888888888888  1    7 9 9   9   9  9   4 7   9  9   7 777    77   7  7      9  9 99                000 9   6     3    
consensus                     :     TCATTTG-GATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAAT---T-TTA-TTCTATTCTA
Reference ( gi|6 )            :     TCATTTGAGATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAAT---T-TTA-TTCTACTCTA
gi|8                          :     TCATTTGA--TCTC-TT-CCTTTGTAA-TTT--T--GT---T--TAGTTT---ATG--TT------T-----TA-TTT--A-A-TAT-TCA-TG-TTACA-TT--GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAA----T-TTA-TTCTATTCTA
gi|3                          :     TCATT--GGATCTC-TTTCCCCTGT-----A--A--TT---T--T-GTTT---ATG--TTATTGTTT-----TA-TTTC-AGA-TATGTCA-TG-TTACACTTT-GT-TCT-G----ATA--CC---T-AATTAG-TC-C--AAA--TGGAAATAAAT---T-TTATTTCTATTCTA
gi|10                         :      CATTTGA-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT-----G--TTA-----T-----TAATTTC-A-A-TAT-TCA-TG-TTACA-TT--GT-TCT-G---AATA--CCC-TT-A-TGAG-TC-C--AAAATTGGAAATAAAT---T-TTA-TTCTACTCT
gi|12                         :      CATTTG-GATCTC-TT-CCC-----------------------T-GTTA---ATG--TT------T-----TA-TTTA-A-A-TAT-TCA--G-TTATA-CTT-GTGTCT-G---AATA--CCC-TT-AATGAG-TCTC--AAAATTGGAAATAAAT---T-TTA-TTCTATTCTA
gi|7                          :       ATTTGA-ATCTC-TT-CCCCTGA---TTA--T--TT---T--TTGTTTGTCATG--TT------T-----TA-TTTC-A-A-TAT-TCT-TG-TTA---TTT-GT-TCT-G---AATA--CCC-TT-TATGGG-TC-C--AAAATTGGATATAAAT---T-CTA-TTCTATTCT
gi|5                          :       ATTTG-GATCTC-TT-CCCTGGT---TTA--T--TT---T--T-GTTT---ATGTATTG-----T-----TA-TTTC-A-A-TAT-TCA-TGTTTACA--TT-GT-TTTGG---AATA--CCC-TT--ATGAG-T--C--AAAATT-GAAATAAAT---T-TTACTTCTATTCT
gi|4                          :    tcgATTTG-GATCTCATT-TC--TGT-----A--A--TT---G--T-GTTT---ATG--TTA-----TGTTT-TA-TTTCGA-A-TAT-TCA-TG-TTACA-ATT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-CATAAAAT--GAAA-AAAT---T-TTA-TTCTAT
gi|11                         : tatgagATTTGGGATCTC-TT-CCCCTGA---TTAATT--TT---T--T-GTTT---ATG--TTAGTTT-T-----TA-TTTCCA-A-TA-------------------GT-TCT-G---AATA--CCC-TTTAATGGG-TC-C--AAAATTGGAAATCTATTCAT-CTA-TTCT
gi|2                          :     caATTTG-GATCTC-TC-GGCCTGTAATTTG--T--TTGGTTAGT-GTTT---ATG--TTA-----C---------------A-TAT-TCAGTG-TTACT-TTT-GT-TCT-GTGAAATAAACGC-TT-AATGAG-TC----AAAATTGGAAATAAAT---T-TTAGTTCTAg
gi|14                         :        TTTG-GATCTC-TT-CCCCTGT---TTA--T--TT---C-----------ATG--TTACT---T-----TA-TTTC-A-A-TAC-TCA-TG-TTGTA-TTT-GT-TCT-G---AATG--CCC-TT-Aattct
gi|9                          :        cTTG-GATCTC-TT-CCCCTGA---TTA--TTATT---T--T-GTTT---ATG--TCATGTT-T-----TA-TCTC-G-------TCT-TG-TT--A-TTT-GT-TCT-G---AATA--CCC-TT-TATGGG-TC-C--AAAATTGGAAATAAAT---T-CTA-TTCTATTATA
gi|1                          :         TTG-GATCTC-AT-TCCTAGT-----A--A--TT---T--T-GTTT---ATG--TTA-----TGTTTTTA-TTTC-A-AATAT-TCA--G-TTACAATTT-GT-TCT-G---AATA--GCC-TT-AATGAGTTC-C--AAAATTGAAA--AAAT---TATTA-TTCTAT
gi|13                         :         atcatgatgC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T------A-TTTC-A-A-TAT-TCA-TG-TTAGA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAAT---T-TTA-TTCTACTCTA
gi|15                         :                                                                                   C-A-A-TAT-TCA-TG-TTATA-TTTTGT-TCT-G---AATA--CCCCTT-AATGGG-TC-C--AAAATAGGAAATAAAT---G-ACA-TTCTATTCTA
gi|16                         :                                                                                                                  CT-G---AATA--CCC-T--AATGAG-TC-C--AAAATTGGAATTGAAT---T-TTA-TTCTATTCTA





Alignments
lowQualScore                  :                                   1111                               333333333333                                                                                                       
lowQualScore                  :                3 3     2  2       2222  66666  555 33 5    555   33  111111111111  2    5 2 2   2   2  2   1 5   2  2   2 444    33   2  2      2  2 33                 2   8    2      
lowQualScore                  :                . .     .  .       ....  .....  ... .. .    ...   ..  ............  .    . . .   .   .  .   . .   .  .   . ...    ..   .  .      .  . ..                 .   .    .      
lowQualScore                  :                1 1     9  9       1111  11111  000 99 7    000   99  111111111111  9    3 7 7   7   7  7   5 3   7  7   5 444    44   5  5      7  7 77                 7   0    7      
consensus                     :         TCATTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTA
Reference ( family-3922 )     :         TCATTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTA
gi|1                          :             TTG-G-ATCTC-AT-TCCTAGT-----A--A--TT---T--T-GTTT---ATG--TTA-----TGTTTTTA-TTTC-A-AATAT-TCA--G-TTACAATTT-GT-TCT-G---AATA--GCC-TT-AATGAGTTC-C--AAAATTGAAA--AAATTATTA-TTCT-ATT
gi|10                         : atcatgatgCATTTG-A-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT-----G--TTA-----T-----TAATTTC-A-A-TAT-TCA-TG-TTACA-TT--GT-TCT-G---AATA--CCC-TT-A-TGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ACTCT
gi|11                         :           ATTTG-GGATCTC-TT-CCCCTGA---TTAATT--TT---T--T-GTTT---ATG--TTAGTTT-T-----TA-TTTCCA-A-TA-------------------GT-TCT-G---AATA--CCC-TTTAATGGG-TC-C--AAAATTGGAAATCTA-T-TCA--TCT-ATTCT
gi|12                         :        caCATTTG-G-ATCTC-TT-CCC-----------------------T-GTTA---ATG--TT------T-----TA-TTTA-A-A-TAT-TCA--G-TTATA-CTT-GTGTCT-G---AATA--CCC-TT-AATGAG-TCTC--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTAg
gi|13                         :                       C-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T------A-TTTC-A-A-TAT-TCA-TG-TTAGA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ACTCTA
gi|14                         :            TTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---C-----------ATG--TTACT---T-----TA-TTTC-A-A-TAC-TCA-TG-TTGTA-TTT-GT-TCT-G---AATG--CCC-TT-A
gi|15                         :                                                                                       cC-A-A-TAT-TCA-TG-TTATA-TTTTGT-TCT-G---AATA--CCCCTT-AATGGG-TC-C--AAAATAGGAAATAAATG-ACA-TTCT-ATTCTA
gi|16                         :                                                                                                                       CT-G---AATA--CCC-T--AATGAG-TC-C--AAAATTGGAATTGAATT-TTA-TTCT-ATTCTA
gi|2                          :           ATTTG-G-ATCTC-TC-GGCCTGTAATTTG--T--TTGGTTAGT-GTTT---ATG--TTA-----C---------------A-TAT-TCAGTG-TTACT-TTT-GT-TCT-GTGAAATAAACGC-TT-AATGAG-TC----AAAATTGGAAATAAATT-TTAGTTCTAATTCT
gi|3                          :         TCATT-G-G-ATCTC-TTTCCCCTGT-----A--A--TT---T--T-GTTT---ATG--TTATTGTTT-----TA-TTTC-AGA-TATGTCA-TG-TTACACTTT-GT-TCT-G----ATA--CC---T-AATTAG-TC-C--AAA--TGGAAATAAATT-TTATTTCT-ATTCTA
gi|4                          :           ATTTG-G-ATCTCATT-TC--TGT-----A--A--TT---G--T-GTTT---ATG--TTA-----TGTTT-TA-TTTCGA-A-TAT-TCA-TG-TTACA-ATT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-CATAAAAT--GAAA-AAATT-TTA-TTCT-ATT
gi|5                          :     tatgagATTTG-G-ATCTC-TT-CCCTGGT---TTA--T--TT---T--T-GTTT---ATGTATTG-----T-----TA-TTTC-A-A-TAT-TCA-TGTTTACA--TT-GT-TTTGG---AATA--CCC-TT--ATGAG-T--C--AAAATT-GAAATAAATT-TTACTTCT-ATTCT
gi|6                          :      tcgTCATTTGAG-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ACTCTA
gi|7                          :           ATTTG-A-ATCTC-TT-CCCCTGA---TTA--T--TT---T--TTGTTTGTCATG--TT------T-----TA-TTTC-A-A-TAT-TCT-TG-TTA---TTT-GT-TCT-G---AATA--CCC-TT-TATGGG-TC-C--AAAATTGGATATAAATT-CTA-TTCT-ATTCT
gi|8                          :         TCATTTG---ATCTC-TT-CCTTTGTAA-TTT--T--GT---T--TAGTTT---ATG--TT------T-----TA-TTT--A-A-TAT-TCA-TG-TTACA-TT--GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAA-T-TTA-TTCT-ATTCTA
gi|9                          :             TTG-G-ATCTC-TT-CCCCTGA---TTA--TTATT---T--T-GTTT---ATG--TCATGTT-T-----TA-TCTC-G-------TCT-TG-TT--A-TTT-GT-TCT-G---AATA--CCC-TT-TATGGG-TC-C--AAAATTGGAAATAAATT-CTA-TTCT-ATTATA





Alignments
lowQualScore                  :                                   1111                               333333333333                                                                                                       
lowQualScore                  :                3 3     2  2       2222  66666  555 33 5    555   33  111111111111  2    5 2 2   2   2  2   1 5   2  2   2 444    33   2  2      2  2 33                 2   8    2      
lowQualScore                  :                . .     .  .       ....  .....  ... .. .    ...   ..  ............  .    . . .   .   .  .   . .   .  .   . ...    ..   .  .      .  . ..                 .   .    .      
lowQualScore                  :                1 1     9  9       1111  11111  000 99 7    000   99  111111111111  9    3 7 7   7   7  7   5 3   7  7   5 444    44   5  5      7  7 77                 7   0    7      
consensus                     :         TCATTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTA
Reference ( family-3922 )     :         TCATTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTA
gi|1                          :             TTG-G-ATCTC-AT-TCCTAGT-----A--A--TT---T--T-GTTT---ATG--TTA-----TGTTTTTA-TTTC-A-AATAT-TCA--G-TTACAATTT-GT-TCT-G---AATA--GCC-TT-AATGAGTTC-C--AAAATTGAAA--AAATTATTA-TTCT-ATT
gi|10                         : atcatgatgCATTTG-A-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT-----G--TTA-----T-----TAATTTC-A-A-TAT-TCA-TG-TTACA-TT--GT-TCT-G---AATA--CCC-TT-A-TGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ACTCT
gi|11                         :           ATTTG-GGATCTC-TT-CCCCTGA---TTAATT--TT---T--T-GTTT---ATG--TTAGTTT-T-----TA-TTTCCA-A-TA-------------------GT-TCT-G---AATA--CCC-TTTAATGGG-TC-C--AAAATTGGAAATCTA-T-TCA--TCT-ATTCT
gi|12                         :        caCATTTG-G-ATCTC-TT-CCC-----------------------T-GTTA---ATG--TT------T-----TA-TTTA-A-A-TAT-TCA--G-TTATA-CTT-GTGTCT-G---AATA--CCC-TT-AATGAG-TCTC--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTAg
gi|13                         :                       C-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T------A-TTTC-A-A-TAT-TCA-TG-TTAGA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ACTCTA
gi|14                         :            TTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---C-----------ATG--TTACT---T-----TA-TTTC-A-A-TAC-TCA-TG-TTGTA-TTT-GT-TCT-G---AATG--CCC-TT-A
gi|15                         :                                                                                       cC-A-A-TAT-TCA-TG-TTATA-TTTTGT-TCT-G---AATA--CCCCTT-AATGGG-TC-C--AAAATAGGAAATAAATG-ACA-TTCT-ATTCTA
gi|16                         :                                                                                                                       CT-G---AATA--CCC-T--AATGAG-TC-C--AAAATTGGAATTGAATT-TTA-TTCT-ATTCTA
gi|2                          :           ATTTG-G-ATCTC-TC-GGCCTGTAATTTG--T--TTGGTTAGT-GTTT---ATG--TTA-----C---------------A-TAT-TCAGTG-TTACT-TTT-GT-TCT-GTGAAATAAACGC-TT-AATGAG-TC----AAAATTGGAAATAAATT-TTAGTTCTAATTCT
gi|3                          :         TCATT-G-G-ATCTC-TTTCCCCTGT-----A--A--TT---T--T-GTTT---ATG--TTATTGTTT-----TA-TTTC-AGA-TATGTCA-TG-TTACACTTT-GT-TCT-G----ATA--CC---T-AATTAG-TC-C--AAA--TGGAAATAAATT-TTATTTCT-ATTCTA
gi|4                          :           ATTTG-G-ATCTCATT-TC--TGT-----A--A--TT---G--T-GTTT---ATG--TTA-----TGTTT-TA-TTTCGA-A-TAT-TCA-TG-TTACA-ATT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-CATAAAAT--GAAA-AAATT-TTA-TTCT-ATT
gi|5                          :     tatgagATTTG-G-ATCTC-TT-CCCTGGT---TTA--T--TT---T--T-GTTT---ATGTATTG-----T-----TA-TTTC-A-A-TAT-TCA-TGTTTACA--TT-GT-TTTGG---AATA--CCC-TT--ATGAG-T--C--AAAATT-GAAATAAATT-TTACTTCT-ATTCT
gi|6                          :      tcgTCATTTGAG-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ACTCTA
gi|7                          :           ATTTG-A-ATCTC-TT-CCCCTGA---TTA--T--TT---T--TTGTTTGTCATG--TT------T-----TA-TTTC-A-A-TAT-TCT-TG-TTA---TTT-GT-TCT-G---AATA--CCC-TT-TATGGG-TC-C--AAAATTGGATATAAATT-CTA-TTCT-ATTCT
gi|8                          :         TCATTTG---ATCTC-TT-CCTTTGTAA-TTT--T--GT---T--TAGTTT---ATG--TT------T-----TA-TTT--A-A-TAT-TCA-TG-TTACA-TT--GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAA-T-TTA-TTCT-ATTCTA
gi|9                          :             TTG-G-ATCTC-TT-CCCCTGA---TTA--TTATT---T--T-GTTT---ATG--TCATGTT-T-----TA-TCTC-G-------TCT-TG-TT--A-TTT-GT-TCT-G---AATA--CCC-TT-TATGGG-TC-C--AAAATTGGAAATAAATT-CTA-TTCT-ATTATA


blockSeqs                     :                A G     A  T       AATT  ATT    GGT AG T    GTC   TA  ATTGTTT       A    C G .   G   G  T   C C   T  G   G TGA    AA   C  T      .  T AT                 .   G    A
blockSeqs                     :                . .     .  .       AAT   TTA    .   .  A    .     .   AGTTTT        .    G . .   .   .  .   T .   .  .   . .      .    .  .      .  . .                  .   T    .
blockSeqs                     :                . .     .  .       T     T      .   .  .    .     .   ATGTTT        .    . . .   .   .  .   G .   .  .   . .      .    .  .      .  . .                  .   C    .
blockSeqs                     :                . .     .  .       T     T      .   .  .    .     .   ATGTTT        .    . . .   .   .  .   T .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                . .     .  .       T     T      .   .  .    .     .   ACTT          .    . . .   .   .  .   T .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                . .     .  .       T     T      .   .  .    .     .   AT            .    . . .   .   .  .   C .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                . .     .  .       T     A      .   .  .    .     .   AT            .    . . .   .   .  .   C .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                . .     .  .       T     A      .   .  .    .     .   AC            .    . . .   .   .  .   C .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                . .     .  .       T     T      .   .  .    .     .   GT            .    . . .   .   .  .   C .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                . .     .  .       T     T      .   .  .    .     .   AT            .    . . .   .   .  .   C .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                . .     .  .       .     T      .   .  .    .     .   T             .    . . .   .   .  .   C .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                . .     .  .       .     T      .   .  .    .     .   T             .    . . .   .   .  .   . .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                        .  .       .     .      .   .  .    .     .   T             .    . . .   .   .  .   . .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                                                                                         . . .   .   .  .   . .   .  .   . .      .    .  .      .  . .                  .   .    .
blockSeqs                     :                                                                                                                         . .      .    .  .                                        


blockSeqCons                  :                                   T***                               AT**********
originalCons                  :         TCATTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTA
finalCons                     :         TCATTTG-G-ATCTC-TT-CCCCTGTT---TA--T--TT---T--T-GTTT---ATG--TTAT----------TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTA





Alignments
lowQualScore                  :                                   1111                               333333333333                                                                                                       
lowQualScore                  :                3 3     2  2       2222  66666  555 33 5    555   33  111111111111  2    5 2 2   2   2  2   1 5   2  2   2 444    33   2  2      2  2 33                 2   8    2      
lowQualScore                  :                . .     .  .       ....  .....  ... .. .    ...   ..  ............  .    . . .   .   .  .   . .   .  .   . ...    ..   .  .      .  . ..                 .   .    .      
lowQualScore                  :                1 1     9  9       1111  11111  000 99 7    000   99  111111111111  9    3 7 7   7   7  7   5 3   7  7   5 444    44   5  5      7  7 77                 7   0    7      
consensus                     :         TCATTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTA
Reference ( family-3922 )     :         TCATTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTA
gi|1                          :             TTG-G-ATCTC-AT-TCCTAGT-----A--A--TT---T--T-GTTT---ATG--TTA-----TGTTTTTA-TTTC-A-AATAT-TCA--G-TTACAATTT-GT-TCT-G---AATA--GCC-TT-AATGAGTTC-C--AAAATTGAAA--AAATTATTA-TTCT-ATT
gi|10                         : atcatgatgCATTTG-A-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT-----G--TTA-----T-----TAATTTC-A-A-TAT-TCA-TG-TTACA-TT--GT-TCT-G---AATA--CCC-TT-A-TGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ACTCT
gi|11                         :           ATTTG-GGATCTC-TT-CCCCTGA---TTAATT--TT---T--T-GTTT---ATG--TTAGTTT-T-----TA-TTTCCA-A-TA-------------------GT-TCT-G---AATA--CCC-TTTAATGGG-TC-C--AAAATTGGAAATCTA-T-TCA--TCT-ATTCT
gi|12                         :        caCATTTG-G-ATCTC-TT-CCC-----------------------T-GTTA---ATG--TT------T-----TA-TTTA-A-A-TAT-TCA--G-TTATA-CTT-GTGTCT-G---AATA--CCC-TT-AATGAG-TCTC--AAAATTGGAAATAAATT-TTA-TTCT-ATTCTAg
gi|13                         :                       C-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T------A-TTTC-A-A-TAT-TCA-TG-TTAGA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ACTCTA
gi|14                         :            TTTG-G-ATCTC-TT-CCCCTGT---TTA--T--TT---C-----------ATG--TTACT---T-----TA-TTTC-A-A-TAC-TCA-TG-TTGTA-TTT-GT-TCT-G---AATG--CCC-TT-A
gi|15                         :                                                                                       cC-A-A-TAT-TCA-TG-TTATA-TTTTGT-TCT-G---AATA--CCCCTT-AATGGG-TC-C--AAAATAGGAAATAAATG-ACA-TTCT-ATTCTA
gi|16                         :                                                                                                                       CT-G---AATA--CCC-T--AATGAG-TC-C--AAAATTGGAATTGAATT-TTA-TTCT-ATTCTA
gi|2                          :           ATTTG-G-ATCTC-TC-GGCCTGTAATTTG--T--TTGGTTAGT-GTTT---ATG--TTA-----C---------------A-TAT-TCAGTG-TTACT-TTT-GT-TCT-GTGAAATAAACGC-TT-AATGAG-TC----AAAATTGGAAATAAATT-TTAGTTCTAATTCT
gi|3                          :         TCATT-G-G-ATCTC-TTTCCCCTGT-----A--A--TT---T--T-GTTT---ATG--TTATTGTTT-----TA-TTTC-AGA-TATGTCA-TG-TTACACTTT-GT-TCT-G----ATA--CC---T-AATTAG-TC-C--AAA--TGGAAATAAATT-TTATTTCT-ATTCTA
gi|4                          :           ATTTG-G-ATCTCATT-TC--TGT-----A--A--TT---G--T-GTTT---ATG--TTA-----TGTTT-TA-TTTCGA-A-TAT-TCA-TG-TTACA-ATT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-CATAAAAT--GAAA-AAATT-TTA-TTCT-ATT
gi|5                          :     tatgagATTTG-G-ATCTC-TT-CCCTGGT---TTA--T--TT---T--T-GTTT---ATGTATTG-----T-----TA-TTTC-A-A-TAT-TCA-TGTTTACA--TT-GT-TTTGG---AATA--CCC-TT--ATGAG-T--C--AAAATT-GAAATAAATT-TTACTTCT-ATTCT
gi|6                          :      tcgTCATTTGAG-ATCTC-TT-CCCCTGT---TTA--T--TT---T--T-GTTT---ATG--TTA-----T-----TA-TTTC-A-A-TAT-TCA-TG-TTACA-TTT-GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAATT-TTA-TTCT-ACTCTA
gi|7                          :           ATTTG-A-ATCTC-TT-CCCCTGA---TTA--T--TT---T--TTGTTTGTCATG--TT------T-----TA-TTTC-A-A-TAT-TCT-TG-TTA---TTT-GT-TCT-G---AATA--CCC-TT-TATGGG-TC-C--AAAATTGGATATAAATT-CTA-TTCT-ATTCT
gi|8                          :         TCATTTG---ATCTC-TT-CCTTTGTAA-TTT--T--GT---T--TAGTTT---ATG--TT------T-----TA-TTT--A-A-TAT-TCA-TG-TTACA-TT--GT-TCT-G---AATA--CCC-TT-AATGAG-TC-C--AAAATTGGAAATAAA-T-TTA-TTCT-ATTCTA
gi|9                          :             TTG-G-ATCTC-TT-CCCCTGA---TTA--TTATT---T--T-GTTT---ATG--TCATGTT-T-----TA-TCTC-G-------TCT-TG-TT--A-TTT-GT-TCT-G---AATA--CCC-TT-TATGGG-TC-C--AAAATTGGAAATAAATT-CTA-TTCT-ATTATA