lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111 22222222222222 1 11 5555555555555555555555555 111 22222 2222222 111111 5555555555555555555 11 11111 1 11111111 2222222 111 11 1 777777777777777777777777777777 1 2222222222 44444 1 222 0000000000000000000000000000000000000000000000000000000000000000000000000000000000 111111111111 11 22 111 22 1 1 1 2 1 1 1 1 33 3333 222 1 11 1 1 7777777777777777777777 1 2222 1 1 1 5555555555555555555555555 1 1 222222 1 111 111 11 1 111111 111 1 1 1 11 1 1 1 2222222222 1 22222 5555555555555555555555 1111 1 111 1111 11 333333 222222222 111 111 11 111111111 111111111111 11 111 11 11111 22 11 1 1 1 111111 1 1 2222 22222222222 888888888888888
lowQualScore : 777 1 4 888 4 4 22222222222222 4 0 3 4 4 44 1 88 6 2 4 3333333333333333333333333 555 22222 5555555 4 777 0 4 888888 3 4 5 4444444444444444444 00 3 55555 0 88888888 3 1 1 1 9999999 5 44 1 8 4 333 8 3 3 4 8 99 0 8 3 999999999999999999999999999999 3 55 4 3333333333 11111 2 55 000 7777777777777777777777777777777777777777777777777777777777777777777777777777777777 333333333333 9999 1 0 22 1 11 4 4 5 4 0 222 2 5 5 66 6 5 8 3 7 3 4 8 1 99 3 6 3 3 7 7 3 6 0 6 6 0 7 7 33 3 0000 555 5 3 5 1 3 00 5 1 0 1111111111111111111111 6 0 5 4444 0 0 3 0 88 0000000000000000000000000 8 0 0 3 77 99 3 1 3 333333 5 0 5 2 5 5 000 5 1 9 8 0 3 55 33 333 5 5 5 11 1 5 666666 666 5 77 6 999 1 99 1 0 3 3 5 4 8 4 4 55 5 4 0 5 6 88 2 7 1 4 5 5 00 5 5 5 5 5 5 6 5 66 0 2 0 5 5 2 1 5 5 5 77 44 3333333333 5 5 1 66666 77 5 88 4444444444444444444444 0000 5 5 5 5 5 0 5 5 666 555 5 0 5 0000 00 5 5 111111 5 555555555 2 777 5 2 66 5 5 4 3 888 4 4 222 4 77 4 4 55 888888888 666666666666 5 1 11 0 3 111 0 22 99999 5 77 8 22 5 5 33 1 5 2 3 0 8 0 5 1 5 5 77 3 888 5 0 6 5 66 777777 2 66 9 5 1 4 2 0000 3 33333333333 333333333333333 5 888 66 5 1
lowQualScore : ... . . ... . . .............. . . . . . .. . .. . . . ......................... ... ..... ....... . ... . . ...... . . . ................... .. . ..... . ........ . . . . ....... . .. . . . ... . . . . . .. . . . .............................. . .. . .......... ..... . .. ... .................................................................................. ............ .... . . .. . .. . . . . . ... . . . .. . . . . . . . . . .. . . . . . . . . . . . . . . .. . .... ... . . . . . .. . . . ...................... . . . .... . . . . .. ......................... . . . . .. .. . . . ...... . . . . . . ... . . . . . . .. .. ... . . . .. . . ...... ... . .. . ... . .. . . . . . . . . . .. . . . . . .. . . . . . . .. . . . . . . . . .. . . . . . . . . . . .. .. .......... . . . ..... .. . .. ...................... .... . . . . . . . . ... ... . . . .... .. . . ...... . ......... . ... . . .. . . . . ... . . ... . .. . . .. ......... ............ . . .. . . ... . .. ..... . .. . .. . . .. . . . . . . . . . . . .. . ... . . . . .. ...... . .. . . . . . .... . ........... ............... . ... .. . .
lowQualScore : 888 9 4 000 4 4 11111111111111 4 7 3 4 4 33 1 66 0 5 1 2222222222222222222222222 000 22222 6666666 4 888 7 4 999999 2 0 0 9999999999999999999 99 8 88888 0 11111111 2 9 9 8 4444444 2 33 1 9 3 333 9 6 6 0 4 66 7 9 1 111111111111111111111111111111 6 00 5 0000000000 55555 3 00 555 8888888888888888888888888888888888888888888888888888888888888888888888888888888888 666666666666 4444 1 1 22 0 22 4 7 4 2 1 888 5 0 0 22 7 8 0 3 3 5 2 2 0 88 3 7 3 5 3 0 5 7 8 7 7 7 3 3 33 7 0000 666 7 3 0 4 7 77 7 4 0 3333333333333333333333 6 1 0 0000 0 0 0 0 00 0000000000000000000000000 7 1 7 7 44 66 3 3 3 666666 7 7 7 9 7 7 000 7 7 3 7 4 0 00 11 777 7 7 7 66 4 9 777777 000 9 99 6 444 1 44 7 7 0 7 7 0 0 0 0 55 2 4 7 0 9 11 5 9 4 3 0 0 99 0 0 0 0 0 0 5 0 99 2 5 5 0 0 8 1 6 0 7 99 44 3333333333 7 7 4 44444 99 7 44 0000000000000000000000 6666 0 0 0 0 0 0 0 0 666 666 0 4 0 1111 88 0 4 222222 0 444444444 2 222 0 0 99 0 0 4 0 444 4 4 222 4 33 4 4 44 444444444 222222222222 0 1 99 1 1 222 6 99 33333 7 99 7 00 7 7 66 7 7 9 0 7 7 5 2 1 0 0 00 4 888 0 4 0 0 99 999999 2 99 0 0 9 0 5 6666 0 99999999999 000000000000000 6 888 99 0 9
consensus : CACACCAAT--AGATACC-TTCACT--GA-T-CT---GACG--TA--TCCCA-TTGATTGCTTTT-TTA-CAG-A-CAGGAA-GCAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TA-NAAG-TAATCTACAC---TGTTC-TAC-AAGTCTATTGTTTTCA-CT--------TTCC--T--GTTCANTACNTGT----ATATAT-CCCA--------GATTTAGACTGATGTGGAGAATTCCCTG--TNA-TCTCANACAATTCACTTGTTTCAT-TGTGTTGTGCAGT--CTGTT-GTATTATGTACTCTATTATCTGAT-AATGTCCGTAGCA-AATCACCCAGCTGATCACTCTCACATTGTACGTGTATTC----CC-------CAATA---CTT-TT-TC--CCTT-TCATCT--------CGTTTNTA--CCTCTGAT--CCACC-AGC-A---C---C---T---GT--NTC---------T---CCC-ACTCG-------------------T----------A-----CTC-----C----A-CC----ACACA--CTCTCGTTTA-CTCGCNATCTTNTCTACC-T-CCCCATGACTGGAC-AG-AAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAAGCCGGATTNCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCNCTTT-GTGAGCAATACCTG---GTTC-ACTTGTCT-GTGGTTTGACANAATTAGC-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACTGTTTG-CCATAG-TGATAAGCACATATTTCAAACA---TGGAGTC-ATGTATAAATGT-GTATTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TGC-TGACAAAGCATCCACAAACTTGAANGCATCAGTCTG-GCT-TT-CT-A-NTTTACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTG--AAATGTTCATT--TTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTTA-GCATACACAAAA-CA-AGTGTT-GCA-TAATT--CAGTT-TGTTATGTCTT-TGCATNTCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTT-GTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTANATCTTCATTTAAA-CCATACTTCTGGA-GAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGGT---TTGTAA--G-GT-AGT---GT-----------------CTCATT----GA-ACA-C-AGC-C-TCTCTACATGTC-ATCA-A-AGTT-T-TA--GAC-TTAA-CCATGCA-AGGTTTTGTTAT-TCTCNT----TTCATA-ATC-AGCC--AACACATC--TAAT-TTTGTTT--TC-TGGAG-GC-CAAAGACNCCCA-CCAC-A-TCA---TCAAT-AACAAAAACCT-GCG-GA-TTCCT--------GGGGTCACCG--TAGTNCT-CCA--TCTCCCTGACGTCTTCGATCGG----TACAA-CCT--CGTA-ACCT-TC-CTCCTGG--AGCTTGAGGGCGAT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-A-AC-AAACG---TTAC-GCAAGGTTG-GT--TTCTN-----ACTTTCTC--CATCACCGATGGGAAGCTGTGGG-TTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAATG--T-CNATAT--CG-GATTGNTCTGAAAT--ACAA--AT---TACATG---T--TAATG-ATTTAACAAA
Reference ( gi|5 ) : CACACCAAC--AGATACC-TTCACT--GA-T-CT---GATG--TA--TCCCA-TTGATTGCTCTT-TTA-CAG-A-AAGGAA-ACATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CA-GAAG-TAATCTACAC---TGCTC-TAT-GAGACTATTGCTTTCA-CT--------AACC--T--GGTCAGTACATGT----ATATAT-CCCA--------GATTTAGACTGATGTGGAGAATTCCCTC--CAA-TCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGC--CTGTT-GTATTATGTATTCCATTATCTGAG-AATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTAAGTGCATTT----CC--T----TAATA---CTTGTT-TC--CCTT-TCATCT--------TCTTTCTAATCCTCTGTT--CCAGT-AGC-A---T---C---T---GT--ATC---------T---CCC-GCTCA-------------------T----------A-----CTC-----C----A-CC----ACACA--CTTTACTTTA-CTCACAATCTTATCTACC-T-CTCCATGACTGGAC-AG-AA-CAAGGATTTTAATTCTATGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTTTAAAACCGGATTGCTGAAAA-CATCAT-ACAGTTCCATGTTCTGAATGTCTCTATACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA-CGACTCCTCTC-CTCTCATTGTTTTTATCA-TCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTT-AT-C-CCC-TTACTAGAT-GAGGAATTCGCT--------TCTGTTTCTCTTTCTCTTT-GTGAGCAATACCTT---GTTC-ACTTGTCT-GTGGTTTGACATAATTAGC-AATGCAACT-------------------------ACTACTCATATATAACAACATTTGGTCAGGGAACTGTTTA-CCATAA-TGATTAGCACATATTTCATACA---GAAAGTC-ATGTATAAATGT-GTAATGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TGC-TGATAAAGCTTTTACAAACTTGAATGCATCAGTTTG-AAT-TT-CT-A-TTTGACAATTTTCCAAAGAGCCGCTTTTCAT--ATTCATG--AAATGTTCATT--TTTTCTATCCTT-CAAAATGTCTTTTGAAAGGCAGTTTTCGTTTA-GCATACACAAAA-CA-AGTGTT-GCA-TAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATACATTCGAC-TGGATTCAGGAAAAACTTGTCACCAAGAGCTTGGAA-TTTT-GTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATCAGATCTACATTTAAA-CCATACTTCTGGA-GAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGAC---TTGTAA--G-GC-AGT---GT-----------------CTCATT----GA-ACA-C-AGC-C-TCTCTACATGTC-ATCA-A-AGTT-T-TC--GAC-TTAA-CCATCCA-AGGTTGTGTTAT-TCTCAT----TTCATA-ACT-AATT--AACACATT--TAAT-TCTGTTT--TC-TGGAG-GC-CAAAGACTCCCA-AAAC-A-TCA---TCAAT-AACAAAAACCT-GTG-GT-TTCCT--------GGGGTAATCA--TAGTCCT-CCA--TCTCCCTGACATCTTTGGTTGG----CACAA-CCT--CATA-TCCT-TC-CTCCTGG--AGCTTGAGGGCAAT-GTGGTGTGCCATGGCAGATTTCCCGGACCCTGGCACGCC-A-AC-GAATG---TTAC-ACAAGTTTG-GT--TTCTC-----ACTTTTTC--CATCACTGATGGGAAGCTGTGTG-TTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAATG--G-CAATAT--CA-GATTGCTCTGAAAT-AACAAACAT---TACATG---T--TAATG-ATTTAACAAA
gi|2 : CACACCAAC--AGATACC-TTCACT--GAAT-CT---GATG--TA--TCCCA-TCGATTGCTCTT-TTAACAG-A-AAGGAA-ACATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CA-GA-G-TAAT-TACAC---TGCTCCTATTGAGACTATTGCTTTCAACT--------TACC--T--GGTCAGTACATGT----ATATAT-TCCA--------GATTTAGACTGATGTGGAGAATTCCCTC--CAAATCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGCACCTGTT-GTATTATGTATTCCATTATCTGAG-AATGTCCG-AGTA-AATCACCCAGCTGATCA-TCTCACATTGTAAGTGCATTT----CC--T----TAATA---CTTGTT-TC--CCTT-TCATCT--------TCTTTCTAATCCTCTGTT--CCAGTTAGC-A---T---C---T---GT--ATC---------T---CCC-GCTCA-------------------T----------A-----CTC-----C----A-CC----ACACA--CTTTACTTTA-CTCACAATCTTATCTACCCT-CTCCATGACTGGAC-AG-AAACAAGGATTTTAATTCTATGT-ATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTTTAAA-CCGGATTGCTGAAAA-CATCAT-ACAGTTCCATGTTCTGTATGTCTCTATACAATCCTCTCTTCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA--GACTCC-CTCTCTCTCATTGTTTT-ATCAATCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTTTAT-C-CCCCTTACTAGATTGAGAA--TCGCT---------CTGTTTCTCTTTCTCTTTTGTGAGCAATAC-TT---GTTC-ACTTGTCT-GTGGTTTGACATAATTAGC-AATGCAACT-------------------------CCTACTCAT-TATAACAACATTTGGTCAGGGAACTGTTTA-CCATAAATGATTAGCACATATTTCATACA---GAAAGTC-ATGTATAAATGT-GTAATGTGCACCA-TCTGTT-TT-GTGTATGTCCCCTCCAT---TGC-TGATAAAGCTTT-ACAAA--TGAATGCATCAGTTTG-AAT-TTTCT-AATTTGACAATTTTCCAAAGAGCCGCTTTTCATTTATTCAT---AACCGTTCATT--TTTT-TATC-TT-CAAAATGTCTTTTGAAAGGCAGTTTTCGTTTA-GCCAACACAAA--CA-AGTGTT-GCA-TAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATA-ATTCGAC-TGGATTCAGGAAAAACTTGTCACCAATAGCTTGGAA-TTTG-TTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTACATTTAAA-CCATACTTCTGGA-GAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC----GGC--CTCTTC-TTTGGTAACG-GAATGAC---TTGTAA--GTGC-AGT---GT-----------------CTCATT----GA-ACA-CAAGC-C-TCTCTACATGTC-ATCA-A-AGTT-T-TC--GAC-TTAA-CCATCCA-AGGTTGTGTTAT-TCTCAT----TTCATATACT-AATT--AACACATT--TAAT-TCTGTTTTATC-TGGAG-GC-CAAAGACTCCCA-AAAC-A-TCA---TCAAT-A--AAAAACCTGGTG-GT-T--CT--------GGGGTAATCA--TAGTCCT-CCA--TC-CCCTGACATCTTGGGTTGGC---CACAA-CCT--CATA-TCCT-TCGCTCCTGG--AGCTTGAGGGCAAT-GTGGTGTGCCATGGCAGA-TTCCCGGACCCTGGCACGCC-A-AC-GAATG---TTAC-ACAAGTTTG-GTGGTTCTC-----ACTTTTTC--CATCACTGATGGGAAGCTGTGTGTTTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAATG--G-CAATAT--CA-GATTGCTCTGAAAT--ACAAAC-T---TACATG---T--TAATG-ATTTAACAA
gi|1 : CACACCAATCAAGAT--C-TTCAT----A-T-CT---ACTA-------CGCA-TTGATTGCTTTTCTTA-CAG-A-CAG--A-GCAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTA-CAAG-TAATCTATAC---TGTTC-TAC-AAATCTAT-GTTTTTA-CT--------TTCCCAT--GTTCTATACTTG-----ATAGATTCCCA--------GATT-AGACTGATA-GGAAACTTCTTGT--TA---CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTGTATTCAAAGCC--A----CAAGA-------TT-CC--CCTT-TCATTT--------CGTTTGTA--CCTCTGAT--CCACG-AGCCA---C---C---T---ATTCATC---------TTTCCCC-ACTCG-------------------T------------------C-----C----A-CA----AAAAAGCCTCTA-TTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-AC-AT-AA-ATAAGATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTTAAAAGCCGGAT-GCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTCT--AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTTC----TTCACTTT-TTGAGCAATACCT----GTTCCACTTGTCTTGTGGTTTGACAGAATTAGCCAATATAACNNNNNNNNNNNNNNNNNNNNNNNNNCACTACTCATATACAACAGCATTTGTTCAGGAAACTGTTGG-CCATAG-TGATAAGCACAGATTTCAAACA---TAGAGTC-ATGTATAAATGT-GTATTGTGCTCCACTCTGTT-TT-ATGTATGTCCCCTCCAT---TGC-TGACAAAGCATCCATAAACTTAAAACTATCAGTCTG-GCT-TT-CT-A-ATTTACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTG--AAATTTTCACT--GTTTTTATCCTC-TAAAATATCTTTTGAGAGGCTGTTGTCATTTA-GCATACACAAAA-CA-AGTGTT-GCA-TAATT--CAGTT-TGTTATGTGTT-TGCATTTCGTCAATTTCAGCAATGATACGTTGGAC-ATGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTT-GTT-TCCTTTGAAT-ACA-ATTTACTGAG-AAGGGGA-AACATGCGAGATGTTA--ATTTCAGCAATGCAGGTGACATTATATCTTCATTTAAA-CCATACTTCTGGA-GAATCTGTCTTTTGTCATTATCATTTAATTCGTG-ATCAGAA-C--TGTTTAACCTAATCATACAAGTC--CTCTTCTTTTGGTAA-GTGAATGG----TTGTAA--G-GTAAGTTGAGTC----------------CTCATT----GA-ACA-C-AGC-C-TTCTTAATTGTCAATCA-AGAGTT-C-TA--GAC-TT-A-CCATGCA-AGGTTTGGTTAT-TATTCTG---TTCATA-AATCAGCC--AATACATC--TAAT-TTTGTTT--TC-TGGAG-GCACAAGGACCCCCC-ACACAA-TCA---TC-AT-ACAAAAAACCT-GTG-GA-TTCTT--------TTTGTCACGG--TAATGCT-TTA--TCGCTCGGATTTCATCGACTGG----TACAA-TCT--CGTA-ACCT-TC-CTCCTGG--AGCTTGAGGGCGAT-GTGGTGAGCTGTGGCAGACTTCCCGGACCCAGGCCCACC-A-AC-AAACG---TTAC-ACAAGGTTG-GT--TTCTT-----ACTTTCTC--CATCATCGATGGGAAGCTGTGGG-TTTCACAGTAACGCTTGTCTTCCTCTCTCCATTTCTGAATG--T-CCATAT--TATGAAT-CTCTGAA----------AT---TACATA---T--TAATGAATTTAccaaatgaatatagaatattgatgggtttttgtttctataatgtagttgt
gi|8 : CACACCAAT--AAATACC-TCTACT--GA-C-CTTTAGGTGACCA--ACCCAATCTATTGCTCTC-TTA-CAG-A-CAGGAA-TCATAACTCTGACTGTCTGTACA-----------TCTCC---------ACTG--TAACAAC-----TCAA---TA-GAAG-TAATCTACAC---TGTTC-TAC-AAGTATATTGTTTTC-------------------------------TGT----ATATAT-CCCA--------GATTTAGACTGATGTGGAGAATTCCCTG--TTA-TCTCAAATACTTCAATTGTTTCGT-TGTGACGTGCAGT--CTGTT-GTATTACGTATTCTATAATCTGAT-AATGTCCATAGCA-TATCACCCAGCTGATCACTCTCACATTGTAAGTGTATTC----AT--C----TAATA---TTT--C-TC--CCTTGTCATTT--------TGTTTCT--TCCTCTGAT--CCACC-AGC-A---C---CTCCT---GT--CTCCTCCATTCAT---CCC-ACTCC-------------------TTCCTCTCCTCA-----CTCTCCTCC----A-CC----AAACA--TTTTCGTTTA-CTCACAACCTTTTCTACC-T-CTCCATGACTGGAC-AG-AAATAAAAATGTTAATTCTTTGT-ATGACTT-CATTTTTAACACACCAATAAAAGCCCGACACACCTGGGGATGTTTT-AAAACCAGATTCCTGAAAA-CATCAT-ACAGCTCCATGTTCCGTATGTCTCTGTACAATC-TCTCCGCTAACAGTGGGTACTGATCCTCATGTAGCCTTATACACAGATCAAACGATTCCTCTC--TCTCATTGTTTT---CA-TCACTtgatccagataaatagcaataatggtgctttattctataat
gi|12 : CACACCAAT--CAATATC-TTCACT--GA-T-CT---GACC--TA--GCGCA-TTGATTGCTTTC-TTA-CAG-A-CAGGAA-GCAGCACTCTGACTGTCTGTACA-----------TCACC---------ACTG--TAACAAC-----TCAA---TA-CAAG-TAATCTATAC---TGTTC-TAC-AAGTCTATTGTTTTTA-CT--------TTCC--T--GTTCATTACTTGT----AGATAT-CCCA--------GATTTAGACTGATATGGAGAACTTCTTG--TTA-TCTCATACAATTCACTTGTTTGAT-TGTGTTGTGCAGA--CTGTT-GTATTATATACTCTATTATCTGAT-AATGTCCATAGCA-AATCACCCAGCTGATCACTCTCACATTGTACGTGTATTCAAG-CC--A----CAATA---TTT-CC-CC--CTTT-TCATTT--------CGTTTGTA--CCTCTGAT--CCACC-AGC-ACCTT---C---T---CA--ATC---------TTTCCCC-ACTC-------------------------------------CTC-----C----A-CA----AAAAG--CTCTCTTTTC-CTTGCTATCTTATATACC-G-CCTCATGACTGGACAAA-AA-TAAGGATTTTAATttctg
gi|28 : CACACCAAT--AGATACC-TTTACT--GA-C-CT---GACG--TA--TCCCA-TTGATTGCTTAT-TCA-CAG-A-CAGG
gi|4 : tACACCAATCAAGAT--C-TTCAT----A-T-CT---ACTA-------CGCA-TTGATTGCTTTTCTTA-CAG-A-CAG--A-GCAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTA-CAAG-TAATCTATAC---TGTTC-TAC-AAATCTAT-GTTTTTA-CT--------TTCCCAT--GTTCTATACTTG-----ATAGATTCCCA--------GATT-AGACTGATA-GGAAACTTCTTGT--TA---CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTGTATTCAAAGCC--A----CAAGA-------TT-CC--CCTT-TCATTT--------CGTTTGTA--CCTCTGAT--CCACG-AGCCA---C---C---T---ATTCATC---------TTTCCCC-ACTCG-------------------T------------------C-----C----A-CA----AAAAAGCCTCTA-TTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-AC-AT-AA-ATAAGATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTTAAAAGCCGGAT-GCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTCT--AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTTC----TTCACTTT-TTGAGCAATACCT----GTTCCACTTGTCTTGTGGTTTGACAGAATTAGCCAATATAACC-------------------------ACTACTCATACA--ACA-CATTTGTTCAGGAAACTAGTTAGCCATAG-TGATAAGCACAGATTTCAAACATTTAGACGTCCAGTTATAAATGTTGTA-TGTGCTCCACTCTGTTATT-ATGTATGTCCC-TCCATAACTGCCTGACAAAA--TCCATAAACTTAAAACTATCATCTGG-GCT-TT-CT-A-TTT-ACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTG--AAATGTTCACTGTTTTTTTATCCTCATAACATATCTTT-GAGAG-CTGTTGTCATTTAAGCATACACAAAAACA-AGTGTTTGCAATAATT--CAGTTCTGGTATGTGTTATGCAT-TCGTCAATTTCAGCAATGA-ACGTTGGACATTGATTCAGGAAAAACTT-TAACCAAGAGCTTGGAA-TTTTTGTT-TTCTTTGAAT-AAA-ATTTACTGA---AG-GGA-AACATGCGAGATGTTA--ATT-CAGCAATGCAGG-GACAT-ATATCTTCATTTAAAACCATACTT-TGAG-GAATCTGTCTTT-GTCATTTATATTTAATTTGTGTATCAGAA-CGTTGT-TAACCTAATCAC----AGT--CTCTCT-TTTGGTAA-GTGAATGG----TTGTAA--G-GT-AGTT--GT-----------------CTCATT----GA-ACA-C-AGC-C-TCTCTTAATGTCAATCA-A-TGTG-T-TCTAGAC-TTAACCCATC---AAGTTG-GTTA--TCT-ATTCTGTTCATA-AATCAGCC--AATAC-TC--TAAT-TTTGTTT--TC-TGGAG-G--CAAAGACCCCCA-CCAG-A-TCA---TCAAT-ACAAAAAACCT-GTG-GA-TTCTTTTTGTCACAGGGTAA--A--TG------CTG--TATCGCTGG-A--TTTCATCGGACTCTACAA-TCTTGCGTA-ACCTATC-CT-CTGGTCAGC-TGAGGCGAAT----GTGTGACGT-GCAGACTTCCC-GACCCAGGC-CCCC-A-AC-AAACGCCCTTAC-AC-AGTTT---------TT-----ACTTTCTC--CATCATCGATAGG-AGCTG-GGG-TTTCACAGTAACGCTTGTCTT-CTCTCTCCATTTCTGAATG--T-CCATAT--AT-GAAT-CTCTGAAAT-TACA---AT---TA-ATGGAAT--TTATG-AT
gi|16 : ATACCAAT--CAATACCCTTCACTCGAA-TACT---AACC--TAAATTCCA-TTGATTGCTCTTCTTA-CAGTACAAGGAAGACATA-CTCT-ACGGTCTGCACA-----------TCTCC---------ACTA--TAACCAC-----TCAA---TACAAAGTTAATCTACACTAGTGCTC-Tccagaatacaataccataatgtgcttattctatatgacatatatgatag
gi|3 : aCACCACT--CGATACC-TATACT--GA-T-CT---GACC--AA--TCCCA-TTGATTGCTTTT-TGA-CAG-A-CAGGAC-GCAGAACAACGACTGTCTGTACA-----------TCACC---------ACTA--AAGCAAC-----TCAA---CA-GAAG-TAATCTACAC---TGCTC-TGT-ACGTCTACTGTTTTCA-CT--------TTCT--T--GCTTGTTACACGT----ATATAT-CCCA--------GATTTAGATTGATGTGAATAATTTCCTG--TTA-TCTCAAATAATTCACTTGTTTCAT-TGTGTTGTTCCAT--CTGTT-GCACGATGTACTTTAACATCTGAT-AATGTCCGTAGTA-AATCACCCAGCTGATAACTCTCATATTGTA-------TT----CC--CGCCATAATATTTCTCGTT-TCTCCCTC-TCATCTAGCAGCACTTTTTGTCTTCCCCTCTCACCCCGC-ACC-C---T---C---T--------TC---------T---TCCTACTC--------------------T----------C-----CTT-----C----T-CC----ACACA--CTCTTGTTTA-CTCACTATCTTATCTATC-T-CTCCCCGACTGGAC-AG-AAATAAGGATTTCAATTCTGTGT-ATGACTT-TTTCTCTAACACGTCAACAAAAGCCTGACACACACAGGAATGTTTT-AAGACCTGATTCCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACACTC-TCTCTGCTAGTAGTGGGTACTGATCCTCACATAACCTTATACACAGATCAA---A-TCCTCTC--TCTCATTGTTTTTATCA-TCATTCTCCTTTTTTCTATCACTGTCATTGCTACTCTT-AT-CACCT-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACTTT-GGGAGCAATACCTG---GTTC-ACTTGTCT-GTGGTTTGACATAATTAGC-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACTGTTTG-CCATAG-TGATAAGCAAATATTTCAAACA---TGGAGTC-ATGTATAAATGT-GTATTGTGCACCACTCTTTT-TTTGTGTATGTCCCCTCCAT---TGC-TGACAAAGCATCCAAAAATTTAAAAGTATCAG--TGCAGTATT-CTAA-TCTG-CAATTTTCCAAAGTGTCAATTTTCAT--TTTCATG--AAATATTCATT--TTGAATATCCTT-TAAAACACTTTTTGAGAGGCCATTTTCACTTA-GCATACACAAAA-CA-AGTGTT-GTG-TAATT--CAGTT-TGTTATGTCTT-TGCACATTATCAAGTTCATCAATAATACATTGAAC-TGGGTTCAGAAAAAACTTGGAGCCAAGAGTTTGGAA-TTTT-GTT-TCCTTTGAAA-ACA-GTTTACAGAG-AAGGGGA-AACATGCAAGATGTTG--ATGTCAGCAATGCAGGTGACATTATATCTTCATTTAAA-CCATATTTCTGGA-GAATTTGTCTTTTGTCATTGTCATTTAATGTATT-ATCAGAA-C--TGTGTAACTTAATCAC----AGT--CTCCTC-TTTGGTAA-A-GAATGGA---TTATAA--G-GC-TGT---GT-----------------CTCATT----AA-ACA-C-AGT-C-TCTCTACATGTC-ATCA-A-AGTT-C-TA--GAC-TTAA-CCATACA-AGGTTTCGTTAT-TCTCTG----TTCATA-ATC-AGTC--AATGCATC--TAAT-TTTGTTT--TC-TGGAG-GC-CAAAAACTCCTA-CAAC-A-TCA---TCAAT-AACAAAAACCT-GCG-GA-TTCTT--------TGTGTCACAG--TATTGCT-TTA--TTTCTCGGATTTCATCAACTGG----TACAA-CCT--CGTA-ACCT-TC-CTCCTGG--AGCTTGAGGGCGAT-GTGGTGAGCCATGGCGGACTTCCAGGACCCAGACCCACC-A-AC-AAACA---TTAC-GCAAGGTTG-GT--TTCTA-----ACTTTCTG--AATCACTGACGTGAAACTGTGTG-TTTCATAGTAAAGCTTGTCTTCCCCTTTCCATTTTTTAATG--T-CCATATTGTG-AATT--TCTGAA----------AT---CACATG---T--TAATG----TAATAAgacaatccctatttggtttacac
gi|6 : tgATATT-TTCACT--GA-T-TG---AATC--TA--TCCCA-TTGATTGCTTCC-TTA-CAG-A-TAGGAA-GCAGAACGCGGACTGTCTGTACA-----------TCACC---------ACTA--TAACAAC-----CCAA--------------TCC---C---T-TTC-TAC-AAGCATATTGTTTTCA-CTTTCATTGGAAGC--TTTATTCAATATATTCCACAATATAT-TCCATAATCAATGATGTAGATGGATGTTGATGAT--CTTCGGCTA-TCTTAAATAATTATCTGAGTTCTT-TGTGTTCTTTAAT--GTGTT-GTATTATACAATCTATTATTTGAT-AATGCCCATAGTA-AATAATCCAGCTGATTACTCTCACATTGTATGTAAATTT---------------ATA----------TC--CCTCATCATCT--------TGTTT--GGGTCTCCGAT--CCAAA-AGCGA---T---CC--T---GT--CTC---------T---CCC-ATTCATCAAACTCCCTTCTCTCCCT----------ATTCTCCTC-----C----A-CC----ACATG--CATTCGTTTA-ATTAAAATATTATCCGCC-T-CTTTAAGACTGGAG-AG-AAATAAGGATTTTAATTCTATGTC-TGGCTT-TGTCTCTAACACACCAATAAAGGTCTGACACACCAGGGTATGTTTT-AAACCCTGATTCCTGAAAG-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTAGAATC-TCTCTGCTAGCAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGATTCCTCTC--TGTCATTGCTTTTTTCA-TTGCTCTCATTTTTTCTATCACTATCATTGTTACTCCT-AT-T-CCTGTTACTAGATTGAGGA--TCACT---------CTGTTTTTCTTTC-------------ATACCTG---GTTC-ATTTGTCT-GTGGTTTGAAAGAATTAGC-AATATAA-T-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACTGTTTG-CCATAG-TGATAAGCACATATTTCAAACA---CGGAGTC-AT----AATTGT-GTAATGTGCACCATTCTGTT-TT-GTGTATGCCCCCTTCAT---TGC-TGACAAAGCTTTTACTAACTTGTATGCATCGGTCTG-GCT-TT-CT-A-ATTTACAATTTTCCAAAGTGTCAATTTTCAT--ATTCATG--AAATGTTCATA--TTTCCTATCCTT-TAAAATATCTTTTGAGAGGCTGTTTTCATTTA-CCATACACAAAA-CA-AGTGTT-GTA-TAATT--CGGTT-CGTTATGTCTT-TGCATATCATCAAGTTCACTAAT-----ATTGGAA-TGGATTAAAAAAAAA-TTG-AACCAAGAGTTTGAAA-TTTC-TTT-TCCTTTGAAA-ATA-ATTTACAGAG-AAGAGGA-AACATGCGCGATGTTG--AAGTCAGCAGTGCAGGTGACATTAGATCTACATTTAAA-CCATCCTTCTGGA-GAATCTGTTTTTTGTAGTTATCATCTAATGCATA-ATCAAAT-T--TGTGTAGCTTAATTAA----TGT--GTCGTC-TTTGGTAA-G-GAATGGT---TTGTAA--G-GT-AGT---AC-----------------CTCATT----GA-ACA-C-CGT-C-TCTCTACATGTC-ATCA-A-AGAT-T-TA--GAG-TTAT-CCATGCA-GGGCTTTGCTAT-TTTCCA----TTGATA-ATC-AGTC--AACACAAC--TAAT-TTTGTTT--CC-TGGAG-AC-CAAAGACACCCT-CACC-A-TCA---TCAAT-GATAAAAACCT-GTG-GA-CTTTT--------AGGATCACTA--TAGTTCT-CAA--TCTTTCTGATATCTTTGATCGG----CACCA-CCT--CGTA-ACCT-TC-GTCCTGG--AGCTTGAGGGCGAT-GTGGTGAGCCGTGGCAGACTTTCCAGACCCAGGCACGCT-A-AC-AAACG---TTAC-GCAAGGTTG-GT--TTCTT-----ACTTTCTC--CATCACTGACGGGAAGCAGTGGG-TTTCATAGTAAAACTTGTCTTCCTCTTTCCATTTCTTAATG--T-CACTAT--CG-AATTGATCTGAAACGAACAAAAACAGATGAATA---T--TAATG-tcatggttcatttcataatacattagatttaccaaagtgtgaattaaaaatat
gi|14 : atcgatgaAC-----TCAA---TA-CAAG-TAATCTACAC---TGTTC-TAC-ATCCCTATTGTATTTA-CT--------TTCC--T--GTTCATTACATGT----AGATAT-CCCA--------GATTTAGACTGATGTGGTGAATTTCCTG--TGA-TCTCACATAATTCACTTGTTTGAT-TGTGTTGTGCAGT--CTGTT-GTATTATGTACTCTATTATCTGAT-GATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG----T----C-----------TA---TTTGTTCTC--CCTTATCATCT--------TGTGTCCA--CCTCTGAT--CCACC-AGC-GCCTC---C---T---GT--CTG---------T---CCA-ACTCACCC----------------C----------A-----CTC-----C----T-CCCTCTCCACA--CTCTCCTTCATCACACACTCTCGTTTACgagtttat
gi|25 : ATGTAGATA--TTCCTG--TTA-TCTCATACAATTCACGTGTTTCAT-TGTGTTGTTCAGT--CTGTT--CATTATGT
gi|19 : ctttcctgttcattacTGTCCATAATA-AATCACCCAGCTGATCACCCTCACATT
gi|23 : gGCTGATCACTCTCACATTGTACGTGTG----------------TATTA---CT--TT-TC--CCTT---ATCT--------ACTTTC--GCCCTCTGAT--CCACC-AGC-A---CCCAC---T---GT--CTC---------C---TCC-ACTCA-------------------cctcttgacatccactagcaacctctgtctatccctctcctcactccactcatcccagtcctcactctc
gi|13 : CTGATCACTCTCACATTGTACGTCCAT------CC--------AATC---CATAGT-CC--CTTA-TCATCT--------CGTTTCCA--CCTCTGAT--GCACC-AGC-A---C---C---TCCTGT--TTC---------C---CCC-ATTCA-------------------TCCCTCTCCCTA-----CTC-----TCCTTATCC----ACACA--CTCTCGTTTA-CTCACTATCTTTTCTACC-T-CCCCATGACTGGAC-AGAAA-TAAGGccccgctcc
gi|22 : ACTCTCACATTGTACGTGTATTCA---CCATT----CAAT--------TT-TC--CCTTATCATCT--------CGTTTAT--CCCTCTGAT--CCACC-AGC-A---C---C---T--------CC---------T---CCC-TCTCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttttctttcactatcattgttactcttatcccccttactagattgagaat
gi|11 : TCTC--TCTCATTGTTTTTATCA-TCACTCTCCTTTTTTCTACCACTATCTTTGCTACTCTT-AC-CTCCC-TCACTAGATTGAGAA--TCACTAGAAGCACTCTGTTTCTCTTTCTCTTT-GTAAGCAATACCTG---GTTC-ACTTGTCT-GTGGTTTGACATAATTAGC-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACTGTTTG-CCATAG-TGATAAGCACATATTTCAAACA---TGGAGTC-ATGTATAAATGT-GTATTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTTCAT---TGC-TGACAAGGCATTCACAAACTTGAATGCATCTGTCTG-ACT-TT-CT-A-ATTCACAATATTTCAAAGTTTTATTTTTCAT--GTTTTTA--AAATTTTCATT--ATATTGATCCTC-TAAAATGTTTTCTGAAAGCCTATTTTCATTTA-GCATACACATAA-CA-AGTGTT-ACA-TAATT--AAGTT-TGTTATGTCTT-TGCACATTATCAAGTccaactctccttct
gi|13 : TTTTTCTTTCACTATCATTGTTACTCTT-ATCC-CCC-TTACTAGAT-TGAGAAT
gi|21 : ctgatcactctcacattgtacgtccatccaatccatagtcccttatcatctcgtttccacctctgatgcaccagcacctcctgtttcccccattcatccctctccctactctccttatccacacactctcgtttactcactatcttttctacctccccatgactggacagaaataaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaCC-TTGCTACATTGAGAA--TCACT-----------GTTTCTCTTTCACTTT-GGGAGCAATACCTG---GTTC-ACTTGTCT-GTGGTTTGACAGAATTAGC-AATATAACT-------------------------ACTACACATATA
gi|7 : CTCTCTCATT-GTTTTCATCACTTTCTGGTTC-ACTTGTCT-GTGGTTTGACATAGTTAGT-AATATAACT-------------------------ACTACTCATATACAACAACATTTGTTCAGGAAATTGTTTG-CCATAG-TGATAAGCACAGATTTCAAACA---TGGAGTC-ATGCATAAATTT-GTATTGTGCACCACTCTGTT-TT-GTGTATGTCACCTCCAT---TGC-TGATAAAGCATTCATAAAATTAAACCTATCAGTCTG-ATT-TT-GT-A-ATTTACAACATTTCAAAGTGCTCTTTTTCAT---TTTTTGGAAAAT-TTCATT--GTTTGGATCCTC-TAAAATGTTTTCTGAGAGGCTGTTTTCATTTA-GCATACACAGAA-CA-AGTGTT-GCA-TAATT--CAGTT-TGTTATGTCTT-TGCATTTCATCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAATCAAGAGCTTTGAA-TTTT-GTT-TTCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGTGAGATGTTG--ATGTCAGCGATTCAGGTGACAATATATGTTCATCCAAA-CCATACTTCTGGA-GAATTTGTTTTTTGTCTTTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----ATT--CTCTTC-TTTGGTAA-G-GAATGAT---TTGTAT--G-GT-AGT---GTCAGTCCACTAATACAACCTCATT----GATACA-T-ACCTC-TCTCTACATGTC-A-CACA-AGTT-TCTA--GAC-TTAG-CCATGCA-AGGCTGTGTTAT-TTTCTTG---TCCATA-ATC-AA-T--AACACTTT--TAATCTCTGTTT--CC-TGGAGCAC-CAAAGACAACCA-CCAC-A-TCAATGCAAAT-AACAAAAA-CT-GCGAAT-TCCCT--------GGGGTCACCGACTAATACTACCAATTCTTCCTGAC
gi|7 : CATACACAAAA-CAGAGTGGT-GCA-CAATA--CAAAT---TTATGCgc
gi|11 : ctctctcattgttttcatcactttctggttcacttgtctgtggtttgacatagttagtaatataactactactcatatacaacaacatttgttcaggaaattgtttgccatagtgataagcacagatttcaaacatggagtcatCATACACAAAA-CAGAGTGGT-GCA-CAATA--CAtcacctccattgctgataaagcattcataaaattaaacctatcagtctgattttgtaatttacaacatttcaaagtgctctttttcattttttggaaaatttcattgtttggatcctctaaaatgttttctgagaggctgttttcatttagcatacacagaacaagtgttgcataattcagtttgttatgtctttgcatttcatcaagttcatcaatgatacattggactggattcaggaaaaacttgtaatcaagagctttgaattttgttttctttgaaaacaatttacagagaaggggaaacatgtgagatgttgatgtcagcgattcaggtgacaatatatgttcatccaaaccatacttctggagaatttgttttttgtctttgtcatctaatgcatgatcagaactgtgtaacttaatcacattctcttctttggtaaggaatgatttgtatggtagtgtcagtccactaatacaacctcattgatacatacctctctctacatgtcacacaagtttctagacttagccatgcaaggctgtgttattttcttgtccataatcaataacacttttaatctctgtttcctggagcaccaaagacaaccaccacatcaatgcaaataacaaaaactgcgaattccctggggtcaccgactaatactaccaattcttcctgacgc
gi|10 : tctctctcattgtttttatcatcactctccttttttctaccactatctttgctactcttacctccctcactagattgagaatcactagaagcactctgtttctctttctctttgtaagcaatacctggttcacttgtctgtggtttgacataattagcaatataactactactcatatacaacaacatttggtcaggaaactgtttgccatagtgataagcacatatttcaaacatggagtcatgtataaatgATACACAAAA-CA-AGTGTT-GCC-TAATTACCAGTT-T-TTATGCATT-TGCATTTCGTCAA-TCTATGAATGATAGATT-GAC-TGGATTCAGGAAAAACTTGTAACCAAGAGATTGAAAATTGT-GTTCTCCTTCGAAAGACAGATTTACAGAGGAAGGGGACAACATGCGGAGTGGTGTTATTTCAGCAATGCAGGTGACAATAGATCTTCATTTAAA-CCATAC-TCTGGAGGAACTTG-TTTTTGTCATCATTAGTTAAT-CATT-ATCAGAAGC--TGTGTAACTTAATCA------GCTTCTCTTC-TTTGGTAA-G-GAATGGTTTGTTGTAACCG-TA-AGT----T-----------------CTCCTTCTTGAA-ACACC-AGC-CTTCTCTACATGTC-ATCA-A-AGTTCT-TA--GACAATAA-CCATGGC-ACGTTTTGTTAT-T-TCG------TCATT-ATT-CAGTCCAATACAGTCCTAAT-TTTGTTT--TCTTGGAG-TC-CAAAGACTCCCACCACC-A-TCA---TCAATGAACAAAAACC---TG-GA-TTCCT--------GGGGTCGCCA--TAGT-CT-CCAT-TCTTCCTGAC--CTTT--TTGG----TACAA-TCT--C-TA---AT-TC-CTCCTGGA-AGCTTGAGGGCGAT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGACCCACCAA-ACAAAACG---TCACAAAAAGGCTGCGT--CTCTA-----ACTGTCTG--CAtccccttcattgctgacaaggcattcacaaacttgaatgcatctgtctgactttctaattcacaatatttcaaagttttatttttcatgtttttaaaattttcattatattgatcctctaaaatgttttctgaaagcctattttcatttagcatacacataacaagtgttacataattaagtttgttatgtctttgcacattatcaagt
gi|9 : tATTGGAC-TGGATTCAGGAAAAACTTGTTTCCTAGAGCTTGAAA-TTTT-GTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGATGTGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTTAAA-CCATACTTCTGGA-GAATCTGTTTTTTGTCATTATTATCTAATTTATG-ATCA
gi|7 : agTCAGCAATGGAGGTGACATannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccaaagaatcccaccacaatcaatcaatacaaaaatctgcgggattcctggggtcaccagtcctctatcttccgacgttcttgttggtacaaacctcgtaagccttcccctggatttgagggcgattgtggtgattcccggacccagacccaccaacaaaggttatgcatggttggtttctgaccttcgccatcactgaatggaaactgtgggtttcatagtaaagcttgtcttcctctctccatttctgaatgtcaatatcgtatcgatctgaaattacatatcgacgaattaacgaacctgatgaatacc
gi|17 : ctctctcattgttttcatcactttctggttcacttgtctgtggtttgacatagttagtaatataactactactcatatacaacaacatttgttcaggaaattgtttgccatagtgataagcacagatttcaaacatggagtcatgcataaatttgtattgtgcaccactctgttttgtgtCATT----GA-ACA-C-AAT-C-TCTCTACATGTC-ATCA-G-TGTT-C-TA--GAC-CTTT-TCATGCATCGATT-TTTTATATTTCGT----TT-ATG-ATC-TGCC--AACATGTC--TAAT-TTCGTTT--TC-TGCAG-AC-CAAGGACACCCA-CCAC-A-TCG---TCAAT-GACAAAAACCT-GTG-GA-TTtaaagcattcataaaattaaacctatcagtctgattttgtaatttacaacatttcaaagtgctctttttcattttttggaaaatttcattgtttggatcctctaaaatgttttctgagaggctgttttcatttagcatacacagaacaagtgttgcataattcagtttgttatgtctttgcatttcatcaagttcatcaatgatacattggactggattcaggaaaaacttgtaatcaagagctttgaattttgttttctttgaaaacaatttacagagaaggggaaacatgtgagatgttgatgtcagcgattcaggtgacaatatatgttcatccaaaccatacttctggagaatttgttttttgtctttgtcatctaatgcatgatcagaactgtgtaacttaatcacattctcttctttggtaaggaatgatttgtatggtagtgtcagtccactaatacaacctcattgatacatacctctctctacatgtcacacaagtttctagacttagccatgcaaggctgtgttattttcttgtccataatcaataacacttttaatctctgtttcctggagcaccaaagacaaccaccacatcaatgcaaataacaaaaactgcgaattccctggggtcaccgactaatactaccaattcttcctgacgc
gi|9 : C-CAAAGAATCCCA-CCAC-AATCAA--TCAAT-A-CAAAAATCT-GCG-GGATTCCT--------GGGGTCACCA----GTCCT-CTA--TCTTCC-GACGTTCTTG-TTGG----TACAAACCT--CGTAAGCCT-TC-C-CCTGG--A-TTTGAGGGCGATTGTGGTG-----------ATT-CCCGGACCCAGACCCACC-A-AC-AAAGG---TTAT-GCATGGTTG-GT--TTCTG-----ACCTTCGC--CATCACTGAATGGAAACTGTGGG-TTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAATG--T-CAATAT--CG-TATCGATCTGAA----------AT---TACATA---T--CGACG-AATTAACGAA
gi|15 : agattggactggattcaggaaaaacttgtttcctagagcttgaaattttgtttcctttgaaaacaatttacagagaaggggaaacatgcgatgtgttgatttcagcaatgcaggtgacattagatcttcatttaaaccatacttctggagaatctgttttttgtcattattatctaatttatgatcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCCTGGC--GTT-AGAA-GAGTG---CTGT-ACA-GTTTT-CT--CTCTCCAAAAACATTTCCAGCCGCATTGATGGGAAGCTGTGGG-TTTCATAGTAAATCTTGTCTTCCTCTCTCCATTTCTGAATG--T-TCATATTGTA-AATT--TCTGAAAT-CACAA--GT---TA-ATG---TACTAATC-ATcctgatgaatacc
gi|18 : TGAGAAGCTGTGGG-TTTCATAGTAAAGCTTGTCGTCCTCTCTCCATTTCTGAATGTAGTCAATAT--CG-TATTGATCTAAA----------AT---TACATA---T--TAACG-AATTAACAAAagttcatttcataagacactagatctgtcaaagtgaaccgaat
5 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|20 ): ATGTCCATATTGTATATTTCTGAAATCACATGTTAATGTATTTTTTAAAATCATGGTTCATTTCATAAAACACTAATACTATATGTGCCAAAGTAAACAGAATA
Unaligned ( gi|24 ): CTCTGATCCACCAGTGTCTCCTGTCTCACCGACTCACCCCACTCATCTCTCTCCTCACTCTCTTCCTCCACGCTCTCTCGTTTACTGACTATCTTTTCTA
Unaligned ( gi|26 ): GTGTGTTCATCCTTTAATCTTTCTCCCTTATCATCTCGTTTCTCTCTCTGATCCACCAGCATCTCCTGTCTCCTCC
Unaligned ( gi|27 ): TTCGTCTCTAGCAGGGTCTGCAGACACACCAGGGTCTTTTTAGCTGGTTCCTGTAGAGCATCCAGTAATACAG
Unaligned ( gi|29 ): ATGAATATAGAATATTGATGGGTTTTGTTTCTACAA
Alignments
lowQualScore : 11 1111111 1 111 1 44444444444 333333333 111 22222 111 2222222222222 11111111 555555555555555555555555555555555 1 1111111111111 333333333333333333333333 11111111 11111 2222222222222222222222222 5555555555555555 111 1 1 1 11 1 1 111 1 222222222 4444444444444444444444444 1111111111 1 1 1 44444444444444444 11 111 111 111111 1111 1111111 111 444444444
lowQualScore : 11 0 4 666 4 4 4444444 2 000 2 4 4 4 4 1 1 22222222222 555555555 222 00000 444 2 55 777 4 4 4 4 0 666 3 4444444444444 22 2 999999 5 3 44444444 3 3 7 1 44 1 8 2 777 8 2 6 8 8 1 888888 555555555555555555555555555555555 5 44 1111111111111 1 777777777777777777777777 2 44444444 66 777 33333 555 3333333333333333333333333 2 5 5555555555555555 88888 999999 7777 99 3 55 1 1 000 1 2 4 1 4 1 5 0 5 44 66 1 4 1 5 5 7 4 4 5 5 55 777 4 5 3 5 5 5 0 8 66 555555555 0 5 4 55 1 4 4 1 4 4 4444444444444444444444444 5 5 66 5 5 5 6 5 5 888 5 3 1 1 5 5 5 5 1 66 999 1 1 66 0 5 5 5 4 4 4 66 4 4 5 0 1 1 0 2 4 8 4 4 4 4 4 66 2 1 4 3 4 5 66 5555555555 5 5 0 0 888 0 5 5 5 888 00000000000000000 9999 4 8 4 4 8 4 00 666 4 4 2 4 4 555 777 8 4 4 77 777 4 66 4 4 4 1 8 4 111 4 5 5 4 4 0 555555 4 5 4 0 66 4 1 6 999 2 5555 5 66 0 5 5 5 66 5 5 5 2 1 4 5 5 888 5 0 5 66 1 2 4 777 1 7777777 444 111111111 66 4 2 888 66 5 0
lowQualScore : .. . . ... . . ....... . ... . . . . . . . ........... ......... ... ..... ... . .. ... . . . . . ... . ............. .. . ...... . . ........ . . . . .. . . . ... . . . . . . ...... ................................. . .. ............. . ........................ . ........ .. ... ..... ... ......................... . . ................ ..... ...... .... .. . .. . . ... . . . . . . . . . .. .. . . . . . . . . . . .. ... . . . . . . . . .. ......... . . . .. . . . . . . ......................... . . .. . . . . . . ... . . . . . . . . . .. ... . . .. . . . . . . . .. . . . . . . . . . . . . . . . .. . . . . . . .. .......... . . . . ... . . . . ... ................. .... . . . . . . .. ... . . . . . ... ... . . . .. ... . .. . . . . . . ... . . . . . . ...... . . . . .. . . . ... . .... . .. . . . . .. . . . . . . . . ... . . . .. . . . ... . ....... ... ......... .. . . ... .. . .
lowQualScore : 00 8 0 333 0 0 7777777 5 222 0 0 0 0 4 1 1 22222222222 666666666 333 00000 000 4 55 000 0 0 0 0 7 333 6 2222222222222 55 4 000000 5 2 55555555 2 2 5 0 88 0 0 5 333 0 3 4 9 0 8 888888 666666666666666666666666666666666 4 22 1111111111111 0 777777777777777777777777 9 33333333 88 999 44444 000 8888888888888888888888888 9 7 9999999999999999 33333 222222 7777 33 6 99 0 0 333 1 9 3 0 1 4 0 1 7 11 00 4 3 4 0 7 9 3 3 0 0 77 000 2 1 2 0 0 0 0 9 11 000000000 1 3 4 66 1 4 4 0 4 4 4444444444444444444444444 0 0 99 0 0 0 9 0 0 888 0 6 4 0 0 0 9 0 0 66 111 0 4 99 2 9 0 0 4 4 4 11 4 4 3 7 1 4 1 5 4 9 4 4 4 4 4 11 2 0 4 9 4 0 99 4444444444 0 0 0 2 888 0 0 0 0 888 00000000000000000 4444 4 9 4 4 9 4 66 666 4 4 9 4 4 000 333 9 4 4 11 111 4 11 4 4 0 0 0 0 000 0 6 5 0 0 1 000000 4 3 4 9 11 4 8 4 555 0 6666 0 99 2 0 0 0 99 0 0 0 5 4 2 0 0 888 0 4 0 99 0 0 4 888 0 9999999 333 777777777 11 4 5 888 99 0 5
consensus : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACCTA--TCCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTC----------C--TGTTCANTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTTCCTGTTA-TCTCANATAATTCACTTGCTTCAT-TGTGTTGTNCAGN--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG------TATTCA---CC----C--A--ATACTT-TT------TCCCTT-TC--ATCT-----CG------TTTCT-----------------A------CCTC-TG--------ATCCA--CCAG---C-A---C---CT-----GTC--TC---------T---CC-C-ACTCG---T----------ACTC-----C----A-CC----ACACACTCTC-GTTTA-CTCGCNATCTTNTCTACC-T-CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAA-ACCGGATTGCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTANTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATTCACAAACTTGAANGCATCAGTCT-GG-CTTTCTAATTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATATCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-ATCA-A--AGTT-C-TAGACT-TAA-CCATGCA-AGGTTTTGTTAT-T--TTCNT-TTCAT-A-AT-CAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACTGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--AATTGCTCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
Reference ( family-3835 ) : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACGTA--TCCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TANAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTC----------C--TGTTCANTACNTG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTCCCTGTNA-TCTCANACAATTCACTTGTTTCAT-TGTGTTGTGCAGT--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGCA-AATCACCCAGCTGATCACTCTCACATTGTACGTG------TATTC----CC----C--A--ATACTT-TT------TCCCTT-TC--ATCT-----CG------TTTNT-----------------A------CCTC-TG--------ATCCA--CCAG---C-A---C---CT-----GTN--TC---------T---CC-C-ACTCG---T----------ACTC-----C----A-CC----ACACACTCTC-GTTTA-CTCGCNATCTTNTCTACC-T-CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAA-GCCGGATTNCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCNCT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACANAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTATTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATCCACAAACTTGAANGCATCAGTCT-GG-CTTTCTANTTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATNTCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTANATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-ATCA-A--AGTT-T-TAGACT-TAA-CCATGCA-AGGTTTTGTTAT-T--CTCNT-TTCAT-A-AT-CAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATCGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACCGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCNATAT--CG--GATTGNTCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
gi|1 : CACACCAATCAAGAT--C-TTCAT----A-T-CT-------AC-TA---CGCATTGATTGCTTTTCTTA-CAG-ACA-G--AG-CAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTACAAG--TAATCTATAC---TGTTC-T-AC-AA-ATCTAT---GTTTTTA-CTTTC----------CCATGTTCTATACTTGAT----AGAT-TCCCA--------GATT-AGACTGATA-GGA-AACTTCTTGTTA--CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTG------TATTCAAAGCCA---C--A--AGA----TT------CCCCTT-TC--ATTT-----CG------TTTGT-----------------A------CCTC-TG--------ATCCA--CGAG---CCA---C---CT-----ATTCATC---------TTTCCC-C-ACTCG---T-------------C-----C----A-CA----AAAAAGCCTCTATTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-ACATAAATAAG-ATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTT-AAAAGCCGGAT-GCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTCT--AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTTC----TTCACT-TT-TTGAGCAATACCTGTTCCACTTGTC-TTGTGGTTTGACAGAATTAG-CCAATATAACNNNNNNNNNNNNNNNNNNNNNNNNNCACTACTCATATACAACAGCATTTGTTCAGGAAACT-GTTGGCCATAG-TGATAAGCACAGATTTCAAACA--TAGA-GT-CATGTATAAATG-TGTATTGTGCTCCACTCTGTT-TT-ATGTATGTCCCCTCCAT---TG-CTGACAAAGCATCCATAAACTTAAAACTATCAGTCT-GG-CTTTCTAATTT-ACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTGAAATTTTCAC--TGTTTTTATCCTC-TAAAATATCTTTTGAGAGGCTGTTGTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTGTT-TGCATTTCGTCAATTTCAGCAATGATACGTTGGAC-ATGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAT-ACA-ATTTACTGAG-AAGGGGA-AACATGCGAGATGTTA--ATTTCAGCAATGCAGGTGACATTATATCTTCATTT-AAACCATACTTCTGGAGAATCTGTCTTTTGTCATTATCATTTAATTCGTG-ATCAGAA-C--TGTTTAACCTAATCATACAAGTC--CTCTTCTTTTGGTAA-GTGAATGG-TTGT---AAG-GTAA-G-TTGAGTC----------------CTCATT----GA-ACAC-AGC-CT-TCTTAATTGTCAATCA-AG-AGTT-C-TAGACT-T-A-CCATGCA-AGGTTTGGTTAT-TA-TTCTG-TTCATAA-AT-CAG-CCAATACA--TCTAAT-TTTGTTT--TCT-GGAG-GCACAAGGACCCCCCACACAA-TCA---TC-AT-ACAAAAAACCTGTGG-ATT-CTTTTTGTCAC--GG--T-AATGCT-TTA--T-CGCTCGGATTTCATCGACTGG----TACAA-TCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCTGTGGCAGACTTCCCGGACCCAGGCCCACC-AAC-AAACG---TTAC-ACAAGGTTG-GT--TTCTTACTTTCTCCATCATCGATGGGAAGCTGTG-GGTTTCACAGTAACGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCCATATTATG--AAT--CTCTG---------AA--A-TTACATA---T--TAATGAATTTA
gi|10 : ATACAC-AAAACAAGTG-TTGC-CTAATTACCAGTT-T-TTATGCATT-TGCATTTCGTCAA-TCTATGAATGATAGATTG-AC-TGGATTCAGGAAAAACTTGTAACCAAGAGATTGAAAATTGTGTTCTCCTTCGAAAGACAGATTTACAGAGGAAGGGGACAACATGCGGAGTGGTGTTATTTCAGCAATGCAGGTGACAATAGATCTTCATTT-AAACCATACT-CTGGAGGAACTTGTTTTTGTCATCATTAGTTAAT-CATT-ATCAGAAGC--TGTGTAACTTAATCA------GCTTCTCTTC-TTTGGTAA-G-GAATGGTTTGTTGTAACCGT-AAG-T----T-----------------CTCCTTCTTGAA-ACACCAGC-CTTCTCTACATGTC-ATCA-A--AGTTCT-TAGACAATAA-CCATGGC-ACGTTTTGTTAT-T---TCGT---CAT-T-ATTCAGTCCAATACAGTCCTAAT-TTTGTTT--TCTTGGAG-TC-CAAAGACTCCCACCACCA-TCA---TCAATGAACAAAAACCTG--G-ATT-CCTGGGGTCGC--CA--T-AGT-CT-CCA--TTCTTCCTGAC--CTTT--TTGG----TACAA-TCT--C-TAA---T-TC-CTCCTGG--AAGCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGACCCACCAAACAAAACG---TCACAAAAAGGCTGCGT--CTCTAACTGTCTGCAtgatccagataaatagcaataatggtgctttattctataat
gi|11 : tTCTC--TCTCATTGTTTTTATCA-TCACTCTCCTTTTTTCTACCACTATCTTTGCTACTCTT-AC-CTCCC-TCACTAGATTGAGAA--TCACTAGAAGCACTCTGTTTCTCTTTCTCT-TT-GTAAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTATTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTTCAT---TG-CTGACAAGGCATTCACAAACTTGAATGCATCTGTCT-GA-CTTTCTAATTC-ACAATATTTCAAAGTTTTATTTTTCAT--GTTTTTAAAATTTTCAT--TATATTGATCCTC-TAAAATGTTTTCTGAAAGCCTATTTTCATTT-AGCATACAC-ATAACAAGTG-TTAC-ATAATT--AAGTT-TGTTATGTCTT-TGCACATTATCAAGT
gi|12 : CACACCAAT--CAATATC-TTCACT--GA-T-CT------GACCTA--GCGCATTGATTGCTTTC-TTA-CAG-ACA-GGAAG-CAGCACTCTGACTGTCTGTACA-----------TCACC---------ACTG--TAACAAC-----TCAA---TACAAG--TAATCTATAC---TGTTC-T-AC-AA-GTCTATT--GTTTTTA-CTTTC----------C--TGTTCATTACTTG-T----AGATATCCCA--------GATTTAGACTGATATGGAGAACTTCTTGTTA-TCTCATACAATTCACTTGTTTGAT-TGTGTTGTGCAGA--CTGTT-GTATTATATACTCTATTATCT-GATAATGTCCATAGCA-AATCACCCAGCTGATCACTCTCACATTGTACGTG------TATTCAAG-CCA---C--A--ATATTT-CC------CCCTTT-TC--ATTT-----CG------TTTGT-----------------A------CCTC-TG--------ATCCA--CCAG---C-A---C---CTTCTCAATC--TT---------TC--CC-C-ACTC----------------CTC-----C----A-CA----AAAAGCTCTC-TTTTC-CTTGCTATCTTATATACC-G-CCTCATGACTGGACAAAAATAAGGATTTTAAT
gi|13 : CTGATCACTCTCACATTGTACGTC------CAT-------C----C--A--ATCCAT-AG------TCCCTTATC--ATCT-----CG------TTTCC-----------------A------CCTC-TG--------ATGCA--CCAG---C-A---C---CTCCT--GTT--TC---------C---CC-C-ATTCA---TCCCTCTCCCTACTC-----TCCTTATCC----ACACACTCTC-GTTTA-CTCACTATCTTTTCTACC-T-CCCCATGACTGGACAGAAATAAGG
gi|13 : TTTTTCTTTCACTATCATTGTTACTCTT-ATCC-CCC-TTACTAGATTGAGAA--Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttttctttcactatcattgttactcttatcccccttactagattgagaat
gi|14 : ctgatcactctcacattgtacgtccatccaatccatagtcccttatcatctcgtttccacctctgatgcaccagcacctcctgtttcccccattcatccctctccctactctccttatccacacactctcgtttactcactatcttttctacctccccatgactggacagaaataaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AT-CCCTATT--GTATTTA-CTTTC----------C--TGTTCATTACATG-T----AGATATCCCA--------GATTTAGACTGATGTGGTGAATTTCCTGTGA-TCTCACATAATTCACTTGTTTGAT-TGTGTTGTGCAGT--CTGTT-GTATTATGTACTCTATTATCT-GATGATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG------TCT------------------ATTTGT-TC------TCCCTTATC--ATCT-----TG------TGTCC-----------------A------CCTC-TG--------ATCCA--CCAG---C-GCCTC---CT-----GTC--TG---------T---CC-A-ACTCACCCC----------ACTC-----C----T-CCCTCTCCACACTCTC-CTTCATCACACACTCTCGTTTAC
gi|15 : CATTGATGGGAAGCTGTG-GGTTTCATAGTAAATCTTGTCTTCCTCTCTCCATTTCTGAAT---GTTCATAT--TGTAAATT--TCTGAAA-TC-ACAA--G-TTA-ATG---TACTAATC-AT
gi|16 : cctggcgttagaagagtgctgtacagttttctctctccaaaaacatttccagccgATACCAAT--CAATACCCTTCACTCGAA-TACT------AACCTAAATTCCATTGATTGCTCTTCTTA-CAGTACAAGGAAGACATA-CTCT-ACGGTCTGCACA-----------TCTCC---------ACTA--TAACCAC-----TCAA---TACAAAGTTAATCTACACTAGTGCTC-TGAC-AATCCCTATTTGGTTTACA-Cagttcatttcataagacactagatctgtcaaagtgaaccgaat
gi|17 : aCATT----GA-ACAC-AAT-CT-CTCTACATGTC-ATCA-G--TGTT-C-TAGACC-TTT-TCATGCATCGATTTT-TTATAT--TTCGT-TT-AT-G-AT-CTG-CCAACATG--TCTAAT-TTCGTTT--TCT-GCAG-AC-CAAGGACACCCACCAC-A-TCG---TCAAT-GACAAAAACCTGTGG-ATT-
gi|18 : TGAGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCGTCCTCTCTCCATTTCTGAATGTAGTCAATAT--CG--TATTGATCTA---------AA--A-TTACATA---T--TAACG-AATTAACAAA
gi|19 : TGTCCATAATA-AATCACCCAGCTGATCACCCTCACATTccagttaaataccaataataatactatattctataacata
gi|2 : gCACACCAAC--AGATACC-TTCACT--GAAT-CT------GATGTA--TCCCATCGATTGCTCTT-TTAACAG-AAA-GGAAA-CATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CAGA-G--TAAT-TACAC---TGCTCCT-ATTGA-GACTATT--GCTTTCAACTTAC----------C--TGGTCAGTACATG-T----ATATATTCCA--------GATTTAGACTGATGTGGAGAATTCCCTCCAAATCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGCACCTGTT-GTATTATGTATTCCATTATCT-GAGAATGTCCG-AGTA-AATCACCCAGCTGATCA-TCTCACATTGTAAGTG------CATTT----CC----TT-A--ATACTTGTT------TCCCTT-TC--ATCT-----TC------TTTCT-----------------AAT----CCTC-TG--------TTCCAG-TTAG---C-A---T---CT-----GTA--TC---------T---CC-C-GCTCA---T----------ACTC-----C----A-CC----ACACACTTTA-CTTTA-CTCACAATCTTATCTACCCT-CTCCATGACTGGACAGAAACAAGGATTTTAATTCTATGT-ATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-TAA-ACCGGATTGCTGAAAA-CATCAT-ACAGTTCCATGTTCTGTATGTCTCTATACAATCCTCTCTTCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA--GACTCC-CTCTCTCTCATTG-TTTTATCAATCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTTTAT-C-CCCCTTACTAGATTGAGAA--TCGCT---------CTGTTTCTCTTTCTCT-TTTGTGAGCAATACTTG-TTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATGCAACT-------------------------CCTACTCAT-TATAACAACATTTGGTCAGGGAACT-GTTTACCATAAATGATTAGCACATATTTCATACA--GAAA-GT-CATGTATAAATG-TGTAATGTGCACCA-TCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGATAAAGC-TTTACAAA--TGAATGCATCAGTTT-GAATTTTCTAATTTGACAATTTTCCAAAGAGCCGCTTTTCATTTATTCAT-AACCGTTCAT--TTTTT-TATCTTC--AAAATGTCTTTTGAAAGGCAGTTTTCGTTT-AGCCAACAC-AAA-CAAGTG-TTGC-ATAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATA-ATTCGAC-TGGATTCAGGAAAAACTTGTCACCAATAGCTTGGAA-TTTGTTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTACATTT-AAACCATACTTCTGGAGAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC----GGC--CTCTTC-TTTGGTAACG-GAATGACTTGT---AAGTGC-A-G-T---GT-----------------CTCATT----GA-ACACAAGC-CT-CTCTACATGTC-ATCA-A--AGTT-T-TCGACT-TAA-CCATCCA-AGGTTGTGTTAT-T--CTCAT-TTCAT-ATAC-TAA-TTAACACA--TTTAAT-TCTGTTTTATCT-GGAG-GC-CAAAGACTCCCAAAAC-A-TCA---TCAAT-A--AAAAACCTGGTG-GTT--CTGGGGTAAT--CA--T-AGTCCT-CCA--T-C-CCCTGACATCTTGGGTTGGC---CACAA-CCT--CATAT-CCT-TCGCTCCTGG--A-GCTTGAGGGCA-AT-GTGGTGTGCCATGGCAGA-TTCCCGGACCCTGGCACGCC-AAC-GAATG---TTAC-ACAAGTTTG-GTGGTTCTCACTTTTTCCATCACTGATGGGAAGCTGTGTGTTTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAAT---GGCAATAT--CA--GATTGCTCTGAAA-T--ACAA--ACTTACATG---T--TAATG-ATTTAACAAcctcttgacatccactagcaacctctgtctatccctctcctcactccactcatcccagtcctcactctc
gi|21 : CC-TTGCTACATTGAGAA--TCACT-----------GTTTCTCTTTCACT-TT-GGGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACAGAATTAG-C-AATATAACT-------------------------ACTACACATATAccaaatgaatatagaatattgatgggtttttgtttctataatgtagttgt
gi|22 : ACTCTCACATTGTACGTG------TATTC----AC----C--A--TTCAAT-TT------TCCCTTATC--ATCT-----CG------TTTAT-----------------C------CCTC-TG--------ATCCA--CCAG---C-A---C---CT----------CC---------T---CC-C-TCTC
gi|23 : GCTGATCACTCTCACATTGTACGTG------TGT---------------A--TTAC-T-TT------TCCCTT-----ATCT-----AC------TTTCG-----------------C------CCTC-TG--------ATCCA--CCAG---C-A---CCCACT-----GTC--TC---------C---TC-C-ACTC---------------ACCC-----C----G-Cccaactctccttct
gi|24 : CTC-TG--------ATCCA--CCAGTGTC-T---C---CT-----GTC--TCACCGACTCAC---CC-C-ACTCA---TCTCTCTCCTCACTCTCTTCC----T-CC----ACGCTCTCTC-GTTTA-CTGACTATCTTTTCTAtcc
gi|25 : -CTTTC----------C--TGTTCATTACATG-T----A---------------------------GAT-------ATTCC-TGTTA-TCTCATACAATTCACGTGTTTCAT-TGTGTTGTTCAGT--CTGTT--CATTATGT
gi|26 : GTG------TGTTCAT--CC----TTTA--AT-CTT-TC------TCCCTTATC--ATCT-----CG------TTTCT-----------------C------TCTC-TG--------ATCCA--CCAG---C-ATCTC---CT-----GTC--TC---------C---TC-C-
gi|28 : CACACCAAT--AGATACC-TTTACT--GA-C-CT------GACGTA--TCCCATTGATTGCTTAT-TCA-CAG-ACA-GG
gi|3 : tCACCACT--CGATACC-TATACT--GA-T-CT------GACCAA--TCCCATTGATTGCTTTT-TGA-CAG-ACA-GGACG-CAGAACAACGACTGTCTGTACA-----------TCACC---------ACTA--AAGCAAC-----TCAA---CAGAAG--TAATCTACAC---TGCTC-T-GT-AC-GTCTACT--GTTTTCA-CTTTC----------T--TGCTTGTTACACG-T----ATATATCCCA--------GATTTAGATTGATGTGAATAATTTCCTGTTA-TCTCAAATAATTCACTTGTTTCAT-TGTGTTGTTCCAT--CTGTT-GCACGATGTACTTTAACATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATAACTCTCATATTGTA------------TTC----CCGCCAT--A--ATATTT-CTCGTTTCTCCCTC-TC--ATCT-----AGCAGCACTTTTT-----------------GTCTTCCCCTC-TC--------ACCC----C-G---C-A---C---CC-----TCT--TC---------T---TC-CTACTC----T----------CCTT-----C----T-CC----ACACACTCTT-GTTTA-CTCACTATCTTATCTATC-T-CTCCCCGACTGGACAGAAATAAGGATTTCAATTCTGTGT-ATGACTT-TTTCTCTAACACGTCAACAAAAGCCTGACACACACAGGAATGTTTT-AAG-ACCTGATTCCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACACTC-TCTCTGCTAGTAGTGGGTACTGATCCTCACATAACCTTATACACAGATCAAA----TCCTCTC--TCTCATTGTTTTTATCA-TCATTCTCCTTTTTTCTATCACTGTCATTGCTACTCTT-AT-CACCT-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GGGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCAAATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTATTGTGCACCACTCTTTT-TTTGTGTATGTCCCCTCCAT---TG-CTGACAAAGCATCCAAAAATTTAAAAGTATCAGTGC-AG-TATTCTAATCT-GCAATTTTCCAAAGTGTCAATTTTCAT--TTTCATGAAATATTCAT--TTTGAATATCCTT-TAAAACACTTTTTGAGAGGCCATTTTCACTT-AGCATACAC-AAAACAAGTG-TTGT-GTAATT--CAGTT-TGTTATGTCTT-TGCACATTATCAAGTTCATCAATAATACATTGAAC-TGGGTTCAGAAAAAACTTGGAGCCAAGAGTTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-GTTTACAGAG-AAGGGGA-AACATGCAAGATGTTG--ATGTCAGCAATGCAGGTGACATTATATCTTCATTT-AAACCATATTTCTGGAGAATTTGTCTTTTGTCATTGTCATTTAATGTATT-ATCAGAA-C--TGTGTAACTTAATCAC----AGT--CTCCTC-TTTGGTAA-A-GAATGGATTAT---AAG-GC-T-G-T---GT-----------------CTCATT----AA-ACAC-AGT-CT-CTCTACATGTC-ATCA-A--AGTT-C-TAGACT-TAA-CCATACA-AGGTTTCGTTAT-T--CTCTG-TTCAT-A-AT-CAG-TCAATGCA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAAACTCCTACAAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CTTTGTGTCAC--AG--T-ATTGCT-TTA--T-TTCTCGGATTTCATCAACTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCATGGCGGACTTCCAGGACCCAGACCCACC-AAC-AAACA---TTAC-GCAAGGTTG-GT--TTCTAACTTTCTGAATCACTGACGTGAAACTGTG-TGTTTCATAGTAAAGCTTGTCTTCCCCTTTCCATTTTTTAAT---GTCCATATTGTG--AATT--TCTG---------AA--A-TCACATG---T--TAATG----TAATAA
gi|4 : tgACACCAATCAAGAT--C-TTCAT----A-T-CT-------AC-TA---CGCATTGATTGCTTTTCTTA-CAG-ACA-G--AG-CAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTACAAG--TAATCTATAC---TGTTC-T-AC-AA-ATCTAT---GTTTTTA-CTTTC----------CCATGTTCTATACTTGAT----AGAT-TCCCA--------GATT-AGACTGATA-GGA-AACTTCTTGTTA--CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTG------TATTCAAAGCCA---C--A--AGA----TT------CCCCTT-TC--ATTT-----CG------TTTGT-----------------A------CCTC-TG--------ATCCA--CGAG---CCA---C---CT-----ATTCATC---------TTTCCC-C-ACTCG---T-------------C-----C----A-CA----AAAAAGCCTCTATTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-ACATAAATAAG-ATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTT-AAAAGCCGGAT-GCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTC-T-AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTT----CTTCACT-TT-TTGAGCAATACCTGTTCCACTTGTCTT-GTGGTTTGACAGAATTAGCC-AATATAACC-------------------------ACTACTC--ATACAAC-ACATTTGTTCAGGAAACTAGTTAGCCATAG-TGATAAGCACAGATTTCAAACATTTAGACGTCCAGTTATAAATGTTGTA-TGTGCTCCACTCTGTTATT-ATGTATGT-CCCTCCATAACTGCCTGACAAA--ATCCATAAACTTAAAACTATCA-TCTGGG-CTTTCTA-TTT-ACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTGAAATGTTCACTGTTTTTTTATCCTCATAACATATC-TTTGAGA-GCTGTTGTCATTTAAGCATACACAAAAACAAGTGTTTGCAATAATT--CAGTTCTGGTATGTGTTATGCAT-TCGTCAATTTCAGCAATGA-ACGTTGGACATTGATTCAGGAAAAACTT-TAACCAAGAGCTTGGAATTTTTGTT-TTCTTTGAAT-AAA-ATTTACTG----AAGGGA-AACATGCGAGATGTTA--A-TTCAGCAATGCAGG-GACA-TATATCTTCATTTAAAACCATACTT-TGAGGAATCTG-TCTTTGTCATTTATATTTAATTTGTGTATCAGAA-CGTTGT-TAACCTAATCAC----AGT--CTCTCT-TTTGGTAA-GTGAATGG-TTGT---AAG-GT-A-GTT---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTTAATGTCAATCA-ATGTGTT-C-TAGACT-TAACCCAT-CA-AG--TTGGTTAT-CTATTCTG-TTCATAA-AT-CAG-CCAATAC---TCTAAT-TTTGTTT--TCT-GGAG-G--CAAAGACCCCCACCAG-A-TCA---TCAAT-ACAAAAAACCTGTGG-ATT-CTTTTTGTCACAGGG--TAAATGCT---G--T-ATCGCTG--GATTTC-ATCGGACTCTACAA-TCTTGCGTAA-CCTATC-CT-CTGGTCA-GC-TGA-GGCGAAT-GT-GTGA--CGT-GCAGACTTCCC-GACCCAGGCCC-CC-AAC-AAACGCCCTTAC-ACA-------GT--TT-TTACTTTCTCCATCATCGATAGG-AGCTG-G-GGTTTCACAGTAACGCTTGTCTT-CTCTCTCCATTTCTGAAT---GTCCATATA-TG--AAT--CTCTGAAATT--AC-A--A-TTA-ATGGAAT--TTATG-ATtcatggttcatttcataatacattagatttaccaaagtgtgaattaaaaatat
gi|5 : CACACCAAC--AGATACC-TTCACT--GA-T-CT------GATGTA--TCCCATTGATTGCTCTT-TTA-CAG-AAA-GGAAA-CATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CAGAAG--TAATCTACAC---TGCTC-T-AT-GA-GACTATT--GCTTTCA-CTAAC----------C--TGGTCAGTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTCCCTCCAA-TCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGC--CTGTT-GTATTATGTATTCCATTATCT-GAGAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTAAGTG------CATTT----CC----TT-A--ATACTTGTT------TCCCTT-TC--ATCT-----TC------TTTCT-----------------AAT----CCTC-TG--------TTCCA--GTAG---C-A---T---CT-----GTA--TC---------T---CC-C-GCTCA---T----------ACTC-----C----A-CC----ACACACTTTA-CTTTA-CTCACAATCTTATCTACC-T-CTCCATGACTGGACAGAA-CAAGGATTTTAATTCTATGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTTTAAA-ACCGGATTGCTGAAAA-CATCAT-ACAGTTCCATGTTCTGAATGTCTCTATACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA-CGACTCCTCTC-CTCTCATTGTTTTTATCA-TCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTT-AT-C-CCC-TTACTAGAT-GAGGAATTCGCTT--------CTGTTTCTCTTTCTCT-TT-GTGAGCAATACCTTGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATGCAACT-------------------------ACTACTCATATATAACAACATTTGGTCAGGGAACT-GTTTACCATAA-TGATTAGCACATATTTCATACA--GAAA-GT-CATGTATAAATG-TGTAATGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGATAAAGCTTTTACAAACTTGAATGCATCAGTTT-GA-ATTTCTATTTG-ACAATTTTCCAAAGAGCCGCTTTTCAT--ATTCATGAAATGTTCAT--TTTTTCTATCCTT-CAAAATGTCTTTTGAAAGGCAGTTTTCGTTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATACATTCGAC-TGGATTCAGGAAAAACTTGTCACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATCAGATCTACATTT-AAACCATACTTCTGGAGAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGACTTGT---AAG-GC-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-ATCA-A--AGTT-T-TCGACT-TAA-CCATCCA-AGGTTGTGTTAT-T--CTCAT-TTCAT-A-AC-TAA-TTAACACA--TTTAAT-TCTGTTT--TCT-GGAG-GC-CAAAGACTCCCAAAAC-A-TCA---TCAAT-AACAAAAACCTGTGG-TTT-CCTGGGGTAAT--CA--T-AGTCCT-CCA--T-CTCCCTGACATCTTTGGTTGG----CACAA-CCT--CATAT-CCT-TC-CTCCTGG--A-GCTTGAGGGCA-AT-GTGGTGTGCCATGGCAGATTTCCCGGACCCTGGCACGCC-AAC-GAATG---TTAC-ACAAGTTTG-GT--TTCTCACTTTTTCCATCACTGATGGGAAGCTGTG-TGTTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAAT---GGCAATAT--CA--GATTGCTCTGAAA-TA-ACAAACA-TTACATG---T--TAATG-ATTTAACAAAccagaatacaataccataatgtgcttattctatatgacatatatgatag
gi|6 : ATCGAT--GAATATT-TTCACT--GA-T-TG------AATCTA--TCCCATTGATTGCTTCC-TTA-CAG-ATA-GGAAG-CAGAACGCGGACTGTCTGTACA-----------TCACC---------ACTA--TAACAAC-----CCAA---T--------------CCC---T-TTC-T-AC-AA-GCATATT--GTTTTCA-CTTTCATTGGAAGCTT--TATTCAATATATT-CCACAATATATTCCATAATCAATGATGTAGATGGATGTTGATGATCTTCGGCTA-TCTTAAATAATTATCTGAGTTCTT-TGTGTTCTTTAAT--GTGTT-GTATTATACAATCTATTATTT-GATAATGCCCATAGTA-AATAATCCAGCTGATTACTCTCACATTGTATGTAAATTTATATCC----CT----C--ATCAT-CTTGTT------TGGGTC-TCCGATCCAAAAGCG------ATCCT-----------------G------TCTC-TCCC------ATTCA--TCAAA--C-T---C---CC-----TTC--TC---------T---CC-CTATTC----T----------CCTC-----C----A-CC----ACATGCATTC-GTTTA-ATTAAAATATTATCCGCC-T-CTTTAAGACTGGAGAGAAATAAGGATTTTAATTCTATGTC-TGGCTT-TGTCTCTAACACACCAATAAAGGTCTGACACACCAGGGTATGTTTT-AAA-CCCTGATTCCTGAAAG-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTAGAATC-TCTCTGCTAGCAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGATTCCTCTC--TGTCATTGCTTTTTTCA-TTGCTCTCATTTTTTCTATCACTATCATTGTTACTCCT-AT-T-CCTGTTACTAGATTGAGGA--TCACT---------CTGTTTTTCTTTC--------------ATACCTGGTTCATTTGTC-T-GTGGTTTGAAAGAATTAG-C-AATATAA-T-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--CGGA-GT-CAT----AATTG-TGTAATGTGCACCATTCTGTT-TT-GTGTATGCCCCCTTCAT---TG-CTGACAAAGCTTTTACTAACTTGTATGCATCGGTCT-GG-CTTTCTAATTT-ACAATTTTCCAAAGTGTCAATTTTCAT--ATTCATGAAATGTTCAT--ATTTCCTATCCTT-TAAAATATCTTTTGAGAGGCTGTTTTCATTT-ACCATACAC-AAAACAAGTG-TTGT-ATAATT--CGGTT-CGTTATGTCTT-TGCATATCATCAAGTTCACTAAT-----ATTGGAA-TGGATTAAAAAAAAA-TTG-AACCAAGAGTTTGAAA-TTTCTTT-TCCTTTGAAA-ATA-ATTTACAGAG-AAGAGGA-AACATGCGCGATGTTG--AAGTCAGCAGTGCAGGTGACATTAGATCTACATTT-AAACCATCCTTCTGGAGAATCTGTTTTTTGTAGTTATCATCTAATGCATA-ATCAAAT-T--TGTGTAGCTTAATTAA----TGT--GTCGTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---AC-----------------CTCATT----GA-ACAC-CGT-CT-CTCTACATGTC-ATCA-A--AGAT-T-TAGAGT-TAT-CCATGCA-GGGCTTTGCTAT-T--TTCCA-TTGAT-A-AT-CAG-TCAACACA--ACTAAT-TTTGTTT--CCT-GGAG-AC-CAAAGACACCCTCACC-A-TCA---TCAAT-GATAAAAACCTGTGG-ACT-TTTAGGATCAC--TA--T-AGTTCT-CAA--T-CTTTCTGATATCTTTGATCGG----CACCA-CCT--CGTAA-CCT-TC-GTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTTCCAGACCCAGGCACGCT-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTTACTTTCTCCATCACTGACGGGAAGCAGTG-GGTTTCATAGTAAAACTTGTCTTCCTCTTTCCATTTCTTAAT---GTCACTAT--CG--AATTGATCTGAAA-CGAACAA--A-
gi|7 : CTCTCTCATTGTT-TTCATCACTTTCTGGTTCACTTGTC-T-GTGGTTTGACATAGTTAG-T-AATATAACT-------------------------ACTACTCATATACAACAACATTTGTTCAGGAAATT-GTTTGCCATAG-TGATAAGCACAGATTTCAAACA--TGGA-GT-CATGCATAAATT-TGTATTGTGCACCACTCTGTT-TT-GTGTATGTCACCTCCAT---TG-CTGATAAAGCATTCATAAAATTAAACCTATCAGTCT-GA-TTTTGTAATTT-ACAACATTTCAAAGTGCTCTTTTTCAT--TTTTTGGAAAATTTCAT--TGTTTGGATCCTC-TAAAATGTTTTCTGAGAGGCTGTTTTCATTT-AGCATACAC-AGAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATTTCATCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAATCAAGAGCTTTGAA-TTTTGTT-TTCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGTGAGATGTTG--ATGTCAGCGATTCAGGTGACAATATATGTTCATCC-AAACCATACTTCTGGAGAATTTGTTTTTTGTCTTTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----ATT--CTCTTC-TTTGGTAA-G-GAATGATTTGT---ATG-GT-A-G-T---GTCAGTCCACTAATACAACCTCATT----GATACAT-ACCTCT-CTCTACATGTC-A-CACA--AGTT-TCTAGACT-TAG-CCATGCA-AGGCTGTGTTAT-T--TTCTTGTCCAT-A-AT-CAA--TAACACT--TTTAATCTCTGTTT--CCT-GGAGCAC-CAAAGACAACCACCAC-A-TCAATGCAAAT-AACAAAAA-CTGCGA-ATTCCCTGGGGTCAC--CGACT-AATACTACCAATT-CTTCCTGACGaacagatgaatattaatggagtttat
gi|8 : CACACCAAT--AAATACC-TCTACT--GA-C-CTTTAGGTGACCAA--CCCAATCTATTGCTCTC-TTA-CAG-ACA-GGAAT-CATAACTCTGACTGTCTGTACA-----------TCTCC---------ACTG--TAACAAC-----TCAA---TAGAAG--TAATCTACAC---TGTTC-T-AC-AA-GTATATT--GTTTTC-------------------------------TG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTCCCTGTTA-TCTCAAATACTTCAATTGTTTCGT-TGTGACGTGCAGT--CTGTT-GTATTACGTATTCTATAATCT-GATAATGTCCATAGCA-TATCACCCAGCTGATCACTCTCACATTGTAAGTG------TATTCA---TC----T--A--ATA-TT-TC------TCCCTTGTC--ATTT-----TG------TTTCTTCCTCTGATCCACCAGCA------CCTCCTGTCTCCTCCATTCATCCCA----C-T---C---CT-----TCC--TC---------T---CCTC-ACTC----T----------CCTC-----C----A-CC----AAACATTTTC-GTTTA-CTCACAACCTTTTCTACC-T-CTCCATGACTGGACAGAAATAAAAATGTTAATTCTTTGT-ATGACTT-CATTTTTAACACACCAATAAAAGCCCGACACACCTGGGGATGTTTT-AAA-ACCAGATTCCTGAAAA-CATCAT-ACAGCTCCATGTTCCGTATGTCTCTGTACAATC-TCTCCGCTAACAGTGGGTACTGATCCTCATGTAGCCTTATACACAGATCAAACGATTCCTCT--CTCTCATTGTTTTCATCA-c
gi|9 : ATTGGAC-TGGATTCAGGAAAAACTTGTTTCCTAGAGCTTGAAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGATGTGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTATTATCTAATTTATG-ATCActttctg
gi|9 : agC-CAAAGAATCCCACCAC-AATCAA--TCAAT-A-CAAAAATCTGCGGGATT-CCTGGGGTCAC--C-----AGTCCT-CTA--T-CTTCC-GACGTTCTTG-TTGG----TACAAACCT--CGTAAGCCT-TC-C-CCTGG--A--TTTGAGGGCG-ATTGTGGTGA------------TTCCCGGACCCAGACCCACC-AAC-AAAGG---TTAT-GCATGGTTG-GT--TTCTGACCTTCGCCATCACTGAATGGAAACTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--TATCGATCTG---------AA--A-TTACATA---T--CGACG-AATTAACGAAannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccaaagaatcccaccacaatcaatcaatacaaaaatctgcgggattcctggggtcaccagtcctctatcttccgacgttcttgttggtacaaacctcgtaagccttcccctggatttgagggcgattgtggtgattcccggacccagacccaccaacaaaggttatgcatggttggtttctgaccttcgccatcactgaatggaaactgtgggtttcatagtaaagcttgtcttcctctctccatttctgaatgtcaatatcgtatcgatctgaaattacatatcgacgaattaacgaacctgatgaatacc
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATGTCCATATTGTATATTTCTGAAATCACATGTTAATGTATTTTTTAAAATCATGGTTCATTTCATAAAACACTAATACTATATGTGCCAAAGTAAACAGAATA
Unaligned ( gi|27 ): TTCGTCTCTAGCAGGGTCTGCAGACACACCAGGGTCTTTTTAGCTGGTTCCTGTAGAGCATCCAGTAATACAG
Unaligned ( gi|29 ): ATGAATATAGAATATTGATGGGTTTTGTTTCTACAA
Alignments
lowQualScore : 11 111111 111 1 44444444444 333333333 111 22222 111 2222222222222 11111111 555555555555555555555555 1 22222222222222 11111111 22222 11111 1111111111111 555555555555555555555555555555555555555555555555 111 1 1 1 1 1 1 111 1 222222222 4444444444444444444444444 1111111111 1 1 1 44444444444444444 11 11111 111 111 111111 1111 11 111 444444444
lowQualScore : 11 0 4 666 4 4 111111 0 000 2 4 4 4 4 1 1 22222222222 555555555 222 00000 444 2 55 777 4 4 4 4 0 666 3 4444444444444 22 1 999999 3 3 44444444 3 3 7 0 44 1 0 8 1 666 8 2 6 8 8 1 44 555555555555555555555555 5 44 77777 888888 22222222222222 2 44444444 66 777 33333 555 22222 77 6666 9999999999999 2 5 666666666666666666666666666666666666666666666666 3 7777 99 3 55 1 1 000 1 2 4 1 4 1 5 0 5 1 55 1 4 1 5 5 7 4 4 5 5 55 777 4 5 3 5 5 5 0 8 66 555555555 0 4 55 1 4 4 1 4 4 4444444444444444444444444 5 5 66 5 5 5 5 5 5 888 5 3 1 1 5 5 5 1 66 999 1 1 66 0 5 5 5 4 4 4 66 4 4 5 0 1 1 0 2 4 8 4 4 4 4 4 66 2 1 4 3 4 5 66 5555555555 5 5 0 0 888 0 5 5 5 888 00000000000000000 9999 4 8 4 4 8 4 00 4 4 4 2 4 4 22222 777 1 111 77 777 4 66 4 4 4 1 8 4 111 4 5 5 4 4 0 555555 4 5 4 0 66 4 1 6 999 5555 5 66 0 5 5 5 66 5 5 5 2 1 4 5 5 888 5 0 5 66 1 4 777 1 66 666 444 111111111 66 4 2 888 66 5 0
lowQualScore : .. . . ... . . ...... . ... . . . . . . . ........... ......... ... ..... ... . .. ... . . . . . ... . ............. .. . ...... . . ........ . . . . .. . . . . ... . . . . . . .. ........................ . .. ..... ...... .............. . ........ .. ... ..... ... ..... .. .... ............. . . ................................................ . .... .. . .. . . ... . . . . . . . . . . .. . . . . . . . . . . .. ... . . . . . . . . .. ......... . . .. . . . . . . ......................... . . .. . . . . . . ... . . . . . . . . .. ... . . .. . . . . . . . .. . . . . . . . . . . . . . . . .. . . . . . . .. .......... . . . . ... . . . . ... ................. .... . . . . . . .. . . . . . . ..... ... . ... .. ... . .. . . . . . . ... . . . . . . ...... . . . . .. . . . ... .... . .. . . . . .. . . . . . . . . ... . . . .. . . ... . .. ... ... ......... .. . . ... .. . .
lowQualScore : 00 8 0 333 0 0 555555 8 222 0 0 0 0 4 1 1 22222222222 666666666 333 00000 000 5 55 000 0 0 0 0 7 333 6 2222222222222 55 2 000000 0 2 55555555 2 2 5 4 88 0 5 0 0 555 0 3 4 9 0 8 22 999999999999999999999999 4 22 77777 888888 66666666666666 9 33333333 88 999 44444 000 11111 99 1111 6666666666666 9 7 222222222222222222222222222222222222222222222222 3 7777 33 6 99 0 0 333 1 9 3 0 1 4 0 1 7 4 77 4 3 4 0 7 9 3 3 0 0 77 000 2 1 2 0 0 0 0 9 11 000000000 1 4 66 1 4 4 7 4 4 4444444444444444444444444 0 0 99 0 0 0 9 0 0 888 0 6 4 0 0 0 0 0 66 111 0 4 99 2 9 0 0 4 4 4 11 4 4 1 7 1 4 1 5 4 9 4 4 4 4 4 11 2 1 4 9 4 0 99 4444444444 0 0 0 2 888 0 0 0 0 888 00000000000000000 4444 4 9 4 4 9 4 66 4 4 4 9 4 4 77777 333 1 444 11 111 4 11 4 4 0 0 0 0 000 0 6 5 0 0 1 000000 4 3 4 9 11 4 8 4 555 6666 0 99 2 0 0 0 99 0 0 0 5 4 2 0 0 888 0 4 0 99 0 4 888 7 77 222 111 777777777 11 4 5 888 99 0 5
consensus : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACCTA--TCCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTC----------C--TGTTCANTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTTCCTGTTA-TCTCANATAATTCACTTGCTTCAT-TGTGTTGTNCAGN--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCA-----CC---C---A--ATACTT-TTTCCCTT-TC--ATCT-----CGTT------TCT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CT-----GTC--T----C---------T---CC-C-AC---------------TCG----------T----------ACTC-----CA-CC----ACACACTCTC-GTTTA-CTCGCNATCTTNTCTACC-T-CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAAA-CCGGATTGCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTANTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATTCACAAACTTGAANGCATCAGTCT-GG-CTTTCTAATTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATATCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATGCA-AGGTTTTGTTAT-T--T--TCNT-TTCAT-A-ATCAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACTGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--AATTGCTCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
Reference ( family-3835 ) : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACCTA--TCCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTC----------C--TGTTCANTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTTCCTGTTA-TCTCANATAATTCACTTGCTTCAT-TGTGTTGTNCAGN--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCA-----CC---C---A--ATACTT-TTTCCCTT-TC--ATCT-----CGTT------TCT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CT-----GTC--T----C---------T---CC-C-AC---------------TCG----------T----------ACTC-----CA-CC----ACACACTCTC-GTTTA-CTCGCNATCTTNTCTACC-T-CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAAA-CCGGATTGCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTANTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATTCACAAACTTGAANGCATCAGTCT-GG-CTTTCTAATTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATATCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATGCA-AGGTTTTGTTAT-T--T--TCNT-TTCAT-A-ATCAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACTGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--AATTGCTCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
gi|1 : CACACCAATCAAGAT--C-TTCAT----A-T-CT------A--CTA---CGCATTGATTGCTTTTCTTA-CAG-ACA-G--AG-CAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTACAAG--TAATCTATAC---TGTTC-T-AC-AA-ATCTAT---GTTTTTA-CTTTC----------CCATGTTCTATACTTGAT----AGAT-TCCCA--------GATT-AGACTGATA-GGA-AACTTCTTGTTA--CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTG--TATTCAAAG--CCA--C---A--AGA----TTCCCCTT-TC--ATTT-----CGTT------TGT-----------A--CCTC-TG--------ATCCA--CGAG---CCA---C---CT-----ATTCAT----C---------TTTCCC-C-AC---------------TCG----------T-------------C-----CA-CA----AAAAAGCCTCTATTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-ACATAAATAAG-ATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTT-AAAAGCCGGAT-GCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTCT--AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTTC----TTCACT-TT-TTGAGCAATACCTGTTCCACTTGTC-TTGTGGTTTGACAGAATTAG-CCAATATAACNNNNNNNNNNNNNNNNNNNNNNNNNCACTACTCATATACAACAGCATTTGTTCAGGAAACT-GTTGGCCATAG-TGATAAGCACAGATTTCAAACA--TAGA-GT-CATGTATAAATG-TGTATTGTGCTCCACTCTGTT-TT-ATGTATGTCCCCTCCAT---TG-CTGACAAAGCATCCATAAACTTAAAACTATCAGTCT-GG-CTTTCTAATTT-ACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTGAAATTTTCAC--TGTTTTTATCCTC-TAAAATATCTTTTGAGAGGCTGTTGTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTGTT-TGCATTTCGTCAATTTCAGCAATGATACGTTGGAC-ATGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAT-ACA-ATTTACTGAG-AAGGGGA-AACATGCGAGATGTTA--ATTTCAGCAATGCAGGTGACATTATATCTTCATTT-AAACCATACTTCTGGAGAATCTGTCTTTTGTCATTATCATTTAATTCGTG-ATCAGAA-C--TGTTTAACCTAATCATACAAGTC--CTCTTCTTTTGGTAA-GTGAATGG-TTGT---AAG-GTAA-G-TTGAGTC----------------CTCATT----GA-ACAC-AGC-CT-TCTTAATTGTCAAT-CAAG-AGTTCT-AGACT-T-A-CCATGCA-AGGTTTGGTTAT-TA-T--TCTG-TTCATAA-ATCAG-CCAATACA--TCTAAT-TTTGTTT--TCT-GGAG-GCACAAGGACCCCCCACACAA-TCA---TC-AT-ACAAAAAACCTGTGG-ATT-CTTTTTGTCAC--GG--T-AATGCT-TTA--T-CGCTCGGATTTCATCGACTGG----TACAA-TCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCTGTGGCAGACTTCCCGGACCCAGGCCCACC-AAC-AAACG---TTAC-ACAAGGTTG-GT--TTCTTACTTTCTCCATCATCGATGGGAAGCTGTG-GGTTTCACAGTAACGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCCATATTATG--AAT--CTCTG---------AA--A-TTACATA---T--TAATGAATTTA
gi|10 : ATACAC-AAAACAAGTG-TTGC-CTAATTACCAGTT-T-TTATGCATT-TGCATTTCGTCAA-TCTATGAATGATAGATTG-AC-TGGATTCAGGAAAAACTTGTAACCAAGAGATTGAAAATTGTGTTCTCCTTCGAAAGACAGATTTACAGAGGAAGGGGACAACATGCGGAGTGGTGTTATTTCAGCAATGCAGGTGACAATAGATCTTCATTT-AAACCATACT-CTGGAGGAACTTGTTTTTGTCATCATTAGTTAAT-CATT-ATCAGAAGC--TGTGTAACTTAATCA------GCTTCTCTTC-TTTGGTAA-G-GAATGGTTTGTTGTAACCGT-AAG-T----T-----------------CTCCTTCTTGAA-ACACCAGC-CTTCTCTACATGTC-AT-CAA--AGTTCTTAGACAATAA-CCATGGC-ACGTTTTGTTAT-T--TCGTCAT-T--AT----TCAGTCCAATACAGTCCTAAT-TTTGTTT--TCTTGGAG-TC-CAAAGACTCCCACCACCA-TCA---TCAATGAACAAAAACCTG--G-ATT-CCTGGGGTCGC--CA--T-AGT-CT-CCA--TTCTTCCTGAC--CTTT--TTGG----TACAA-TCT--C-TAA---T-TC-CTCCTGG--AAGCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGACCCACCAAACAAAACG---TCACAAAAAGGCTGCGT--CTCTAACTGTCTGCAtgatccagataaatagcaataatggtgctttattctataat
gi|11 : tTCTC--TCTCATTGTTTTTATCA-TCACTCTCCTTTTTTCTACCACTATCTTTGCTACTCTT-AC-CTCCC-TCACTAGATTGAGAA--TCACTAGAAGCACTCTGTTTCTCTTTCTCT-TT-GTAAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTATTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTTCAT---TG-CTGACAAGGCATTCACAAACTTGAATGCATCTGTCT-GA-CTTTCTAATTC-ACAATATTTCAAAGTTTTATTTTTCAT--GTTTTTAAAATTTTCAT--TATATTGATCCTC-TAAAATGTTTTCTGAAAGCCTATTTTCATTT-AGCATACAC-ATAACAAGTG-TTAC-ATAATT--AAGTT-TGTTATGTCTT-TGCACATTATCAAGT
gi|12 : CACACCAAT--CAATATC-TTCACT--GA-T-CT------GACCTA--GCGCATTGATTGCTTTC-TTA-CAG-ACA-GGAAG-CAGCACTCTGACTGTCTGTACA-----------TCACC---------ACTG--TAACAAC-----TCAA---TACAAG--TAATCTATAC---TGTTC-T-AC-AA-GTCTATT--GTTTTTA-CTTTC----------C--TGTTCATTACTTG-T----AGATATCCCA--------GATTTAGACTGATATGGAGAACTTCTTGTTA-TCTCATACAATTCACTTGTTTGAT-TGTGTTGTGCAGA--CTGTT-GTATTATATACTCTATTATCT-GATAATGTCCATAGCA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCAAG---CCA--C---A--ATATTT-CCCCCTTT-TC--ATTT-----CGTT------TGT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CTTCTCAATC--T----T---------TC--CC-C-AC---------------TC-----------------------CTC-----CA-CA----AAAAGCTCTC-TTTTC-CTTGCTATCTTATATACC-G-CCTCATGACTGGACAAAAATAAGGATTTTAAT
gi|13 : CTGATCACTCTCACATTGTACGT------CCA-----TC---C---A--ATCCAT-AGTCCCTTATC--ATCT-----CGTT------TCC-----------A--CCTC-TG--------ATGCA--CCAG---C-ACCTC---CT-----GTT--T----C---------C---CC-C-AT---------------TCATCCCTCTCCCT----------ACTCTCCT-TATCC----ACACACTCTC-GTTTA-CTCACTATCTTTTCTACC-T-CCCCATGACTGGACAGAAATAAGG
gi|13 : TTTTTCTTTCACTATCATTGTTACTCTT-ATCC-CCC-TTACTAGATTGAGAA--Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttttctttcactatcattgttactcttatcccccttactagattgagaat
gi|14 : ctgatcactctcacattgtacgtccatccaatccatagtcccttatcatctcgtttccacctctgatgcaccagcacctcctgtttcccccattcatccctctccctactctccttatccacacactctcgtttactcactatcttttctacctccccatgactggacagaaataaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AT-CCCTATT--GTATTTA-CTTTC----------C--TGTTCATTACATG-T----AGATATCCCA--------GATTTAGACTGATGTGGTGAATTTCCTGTGA-TCTCACATAATTCACTTGTTTGAT-TGTGTTGTGCAGT--CTGTT-GTATTATGTACTCTATTATCT-GATGATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTGTCTATTTG----------------------T-TCTCCCTTATC--ATCT-----TGTG------TCC-----------A--CCTC-TG--------ATCCA--CCAG---C-GCCTC---CT-----GTC--T----G---------T---CC-A-AC---------------TCACCC-------C----------ACTC-----CT-CCCTCTCCACACTCTC-CTTCATCACACACTCTCGTTTAC
gi|15 : CATTGATGGGAAGCTGTG-GGTTTCATAGTAAATCTTGTCTTCCTCTCTCCATTTCTGAAT---GTTCATAT--TGTAAATT--TCTGAAA-TC-ACAA--G-TTA-ATG---TACTAATC-AT
gi|16 : cctggcgttagaagagtgctgtacagttttctctctccaaaaacatttccagccgATACCAAT--CAATACCCTTCACTCGAA-TACT------AACCTAAATTCCATTGATTGCTCTTCTTA-CAGTACAAGGAAGACATA-CTCT-ACGGTCTGCACA-----------TCTCC---------ACTA--TAACCAC-----TCAA---TACAAAGTTAATCTACACTAGTGCTC-TGAC-AATCCCTATTTGGTTTACA-Cagttcatttcataagacactagatctgtcaaagtgaaccgaat
gi|17 : aCATT----GA-ACAC-AAT-CT-CTCTACATGTC-AT-CAG--TGTTCT-AGACC-TTT-TCATGCATCGATTTT-TTATAT--T--TCGT-TT-AT-G-ATCTG-CCAACATG--TCTAAT-TTCGTTT--TCT-GCAG-AC-CAAGGACACCCACCAC-A-TCG---TCAAT-GACAAAAACCTGTGG-ATT-
gi|18 : TGAGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCGTCCTCTCTCCATTTCTGAATGTAGTCAATAT--CG--TATTGATCTA---------AA--A-TTACATA---T--TAACG-AATTAACAAA
gi|19 : TGTCCATAATA-AATCACCCAGCTGATCACCCTCACATTccagttaaataccaataataatactatattctataacata
gi|2 : gCACACCAAC--AGATACC-TTCACT--GAAT-CT------GATGTA--TCCCATCGATTGCTCTT-TTAACAG-AAA-GGAAA-CATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CA-GAG--TAAT-TACAC---TGCTCCT-ATTGA-GACTATT--GCTTTCAACTTAC----------C--TGGTCAGTACATG-T----ATATATTCCA--------GATTTAGACTGATGTGGAGAATTCCCTCCAAATCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGCACCTGTT-GTATTATGTATTCCATTATCT-GAGAATGTCCG-AGTA-AATCACCCAGCTGATCA-TCTCACATTGTAAGTG--CATTTC-----CT---T---A--ATACTTGTTTCCCTT-TC--ATCT-----TCTT------TCT-----------AATCCTC-TG--------TTCCAG-TTAG---C-A---T---CT-----GTA--T----C---------T---CC-C-GC---------------TCA----------T----------ACTC-----CA-CC----ACACACTTTA-CTTTA-CTCACAATCTTATCTACCCT-CTCCATGACTGGACAGAAACAAGGATTTTAATTCTATGT-ATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-TAAA-CCGGATTGCTGAAAA-CATCAT-ACAGTTCCATGTTCTGTATGTCTCTATACAATCCTCTCTTCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA--GACTCC-CTCTCTCTCATTG-TTTTATCAATCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTTTAT-C-CCCCTTACTAGATTGAGAA--TCGCT---------CTGTTTCTCTTTCTCT-TTTGTGAGCAATACTTG-TTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATGCAACT-------------------------CCTACTCAT-TATAACAACATTTGGTCAGGGAACT-GTTTACCATAAATGATTAGCACATATTTCATACA--GAAA-GT-CATGTATAAATG-TGTAATGTGCACCA-TCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGATAAAGC-TTTACAAA--TGAATGCATCAGTTT-GAATTTTCTAATTTGACAATTTTCCAAAGAGCCGCTTTTCATTTATTCAT-AACCGTTCAT--TTTTT-TATCTTC--AAAATGTCTTTTGAAAGGCAGTTTTCGTTT-AGCCAACAC-AAA-CAAGTG-TTGC-ATAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATA-ATTCGAC-TGGATTCAGGAAAAACTTGTCACCAATAGCTTGGAA-TTTGTTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTACATTT-AAACCATACTTCTGGAGAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC----GGC--CTCTTC-TTTGGTAACG-GAATGACTTGT---AAGTGC-A-G-T---GT-----------------CTCATT----GA-ACACAAGC-CT-CTCTACATGTC-AT-CAA--AGTTTT-CGACT-TAA-CCATCCA-AGGTTGTGTTAT-T--C--TCAT-TTCAT-ATACTAA-TTAACACA--TTTAAT-TCTGTTTTATCT-GGAG-GC-CAAAGACTCCCAAAAC-A-TCA---TCAAT-A--AAAAACCTGGTG-GTT--CTGGGGTAAT--CA--T-AGTCCT-CCA--T-C-CCCTGACATCTTGGGTTGGC---CACAA-CCT--CATAT-CCT-TCGCTCCTGG--A-GCTTGAGGGCA-AT-GTGGTGTGCCATGGCAGA-TTCCCGGACCCTGGCACGCC-AAC-GAATG---TTAC-ACAAGTTTG-GTGGTTCTCACTTTTTCCATCACTGATGGGAAGCTGTGTGTTTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAAT---GGCAATAT--CA--GATTGCTCTGAAA-T--ACAA--ACTTACATG---T--TAATG-ATTTAACAAcctcttgacatccactagcaacctctgtctatccctctcctcactccactcatcccagtcctcactctc
gi|21 : CC-TTGCTACATTGAGAA--TCACT-----------GTTTCTCTTTCACT-TT-GGGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACAGAATTAG-C-AATATAACT-------------------------ACTACACATATAccaaatgaatatagaatattgatgggtttttgtttctataatgtagttgt
gi|22 : ACTCTCACATTGTACGTG--TATTCA-----CCATTC---A--A----T-TTTCCCTTATC--ATCT-----CGTT------TAT-----------C--CCTC-TG--------ATCCA--CCAG---C-ACCTC---CT-----CCC--T----C---------T---CC-CAAC---------------TC
gi|23 : GCTGATCACTCTCACATTGTACGTG--TGT-----------------A--TTAC-T-TTTCCCTT-----ATCT-----ACTT------TCG-----------C--CCTC-TG--------ATCCA--CCAG---C-A---CCCACT-----GTC--T----C---------C---TC-C-AC---------------TC----------------------ACCC-----CG-Ctccttct
gi|24 : CTC-TG--------ATCCA--CCAGTGTC-T---C---CT-----GTC--T----CACCGACTCAC---CC-C-AC---------------TCA----------TCTCTCTCCTCACTCTCTTCCT-CC----ACGCTCTCTC-GTTTA-CTGACTATCTTTTCTAtcc
gi|25 : -CTTTC----------C--TGTTCATTACATG-T-------------A--------GAT-----------------ATT-CCTGTTA-TCTCATACAATTCACGTGTTTCAT-TGTGTTGTTCAGT--CTGTT--CATTATGT
gi|26 : GTG--TGTTCA-----TC---CTTTA--AT-CTT-TCTCCCTTATC--ATCT-----CGTT------TCT-----------C--TCTC-TG--------ATCCA--CCAG---C-ATCTC---CT-----GTC--T----C---------C---TC-C-
gi|28 : CACACCAAT--AGATACC-TTTACT--GA-C-CT------GACGTA--TCCCATTGATTGCTTAT-TCA-CAG-ACA-GG
gi|3 : tCACCACT--CGATACC-TATACT--GA-T-CT------GACCAA--TCCCATTGATTGCTTTT-TGA-CAG-ACA-GGACG-CAGAACAACGACTGTCTGTACA-----------TCACC---------ACTA--AAGCAAC-----TCAA---CAGAAG--TAATCTACAC---TGCTC-T-GT-AC-GTCTACT--GTTTTCA-CTTTC----------T--TGCTTGTTACACG-T----ATATATCCCA--------GATTTAGATTGATGTGAATAATTTCCTGTTA-TCTCAAATAATTCACTTGTTTCAT-TGTGTTGTTCCAT--CTGTT-GCACGATGTACTTTAACATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATAACTCTCATATTGTA--------TTCC-----CG---C---C--ATAATA-TTTC------------T-----CGTT------TCT-----------C--CCTC-TC--------ATCTA--GCAG---C-A---C---TTTTT--GTC--TTCCCC---------T---CT-C-ACCCCGCACCCTCTTCTTCC----------T----------ACTCTCCTTCT-CC----ACACACTCTT-GTTTA-CTCACTATCTTATCTATC-T-CTCCCCGACTGGACAGAAATAAGGATTTCAATTCTGTGT-ATGACTT-TTTCTCTAACACGTCAACAAAAGCCTGACACACACAGGAATGTTTT-AAGA-CCTGATTCCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACACTC-TCTCTGCTAGTAGTGGGTACTGATCCTCACATAACCTTATACACAGATCAAA----TCCTCTC--TCTCATTGTTTTTATCA-TCATTCTCCTTTTTTCTATCACTGTCATTGCTACTCTT-AT-CACCT-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GGGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCAAATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTATTGTGCACCACTCTTTT-TTTGTGTATGTCCCCTCCAT---TG-CTGACAAAGCATCCAAAAATTTAAAAGTATCAGTGC-AG-TATTCTAATCT-GCAATTTTCCAAAGTGTCAATTTTCAT--TTTCATGAAATATTCAT--TTTGAATATCCTT-TAAAACACTTTTTGAGAGGCCATTTTCACTT-AGCATACAC-AAAACAAGTG-TTGT-GTAATT--CAGTT-TGTTATGTCTT-TGCACATTATCAAGTTCATCAATAATACATTGAAC-TGGGTTCAGAAAAAACTTGGAGCCAAGAGTTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-GTTTACAGAG-AAGGGGA-AACATGCAAGATGTTG--ATGTCAGCAATGCAGGTGACATTATATCTTCATTT-AAACCATATTTCTGGAGAATTTGTCTTTTGTCATTGTCATTTAATGTATT-ATCAGAA-C--TGTGTAACTTAATCAC----AGT--CTCCTC-TTTGGTAA-A-GAATGGATTAT---AAG-GC-T-G-T---GT-----------------CTCATT----AA-ACAC-AGT-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATACA-AGGTTTCGTTAT-T--C--TCTG-TTCAT-A-ATCAG-TCAATGCA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAAACTCCTACAAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CTTTGTGTCAC--AG--T-ATTGCT-TTA--T-TTCTCGGATTTCATCAACTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCATGGCGGACTTCCAGGACCCAGACCCACC-AAC-AAACA---TTAC-GCAAGGTTG-GT--TTCTAACTTTCTGAATCACTGACGTGAAACTGTG-TGTTTCATAGTAAAGCTTGTCTTCCCCTTTCCATTTTTTAAT---GTCCATATTGTG--AATT--TCTG---------AA--A-TCACATG---T--TAATG----TAATAA
gi|4 : tgACACCAATCAAGAT--C-TTCAT----A-T-CT------A--CTA---CGCATTGATTGCTTTTCTTA-CAG-ACA-G--AG-CAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTACAAG--TAATCTATAC---TGTTC-T-AC-AA-ATCTAT---GTTTTTA-CTTTC----------CCATGTTCTATACTTGAT----AGAT-TCCCA--------GATT-AGACTGATA-GGA-AACTTCTTGTTA--CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTG--TATTCAAAG--CCA--C---A--AGA----TTCCCCTT-TC--ATTT-----CGTT------TGT-----------A--CCTC-TG--------ATCCA--CGAG---CCA---C---CT-----ATTCAT----C---------TTTCCC-C-AC---------------TCG----------T-------------C-----CA-CA----AAAAAGCCTCTATTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-ACATAAATAAG-ATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTT-AAAAGCCGGAT-GCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTC-T-AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTT----CTTCACT-TT-TTGAGCAATACCTGTTCCACTTGTCTT-GTGGTTTGACAGAATTAGCC-AATATAACC-------------------------ACTACTC--ATACAAC-ACATTTGTTCAGGAAACTAGTTAGCCATAG-TGATAAGCACAGATTTCAAACATTTAGACGTCCAGTTATAAATGTTGTA-TGTGCTCCACTCTGTTATT-ATGTATGT-CCCTCCATAACTGCCTGACAAA--ATCCATAAACTTAAAACTATCA-TCTGGG-CTTTCT-ATTT-ACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTGAAATGTTCACTGTTTTTTTATCCTCATAACATATC-TTTGAGA-GCTGTTGTCATTTAAGCATACACAAAAACAAGTGTTTGCAATAATT--CAGTTCTGGTATGTGTTATGCAT-TCGTCAATTTCAGCAATGA-ACGTTGGACATTGATTCAGGAAAAACTT-TAACCAAGAGCTTGGAATTTTTGTT-TTCTTTGAAT-AAA-ATTTACTG----AAGGGA-AACATGCGAGATGTTA--A-TTCAGCAATGCAGG-GACA-TATATCTTCATTTAAAACCATACTT-TGAGGAATCTG-TCTTTGTCATTTATATTTAATTTGTGTATCAGAA-CGTTGT-TAACCTAATCAC----AGT--CTCTCT-TTTGGTAA-GTGAATGG-TTGT---AAG-GT-A-GTT---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTTAATGTCAAT-CAATGTGTTCT-AGACT-TAACCCAT-CA-AG--TTGGTTAT-CTAT--TCTG-TTCATAA-ATCAG-CCAATAC---TCTAAT-TTTGTTT--TCT-GGAG-G--CAAAGACCCCCACCAG-A-TCA---TCAAT-ACAAAAAACCTGTGG-ATT-CTTTTTGTCACAGGG--TAAATGCT---G--T-ATCGCTG--GATTTC-ATCGGACTCTACAA-TCTTGCGTAA-CCTATC-CT-CTGGTCA-GC-TGA-GGCGAAT-GT-GTGA--CGT-GCAGACTTCCC-GACCCAGGCCC-CC-AAC-AAACGCCCTTAC-ACA-------GT--TT-TTACTTTCTCCATCATCGATAGG-AGCTG-G-GGTTTCACAGTAACGCTTGTCTT-CTCTCTCCATTTCTGAAT---GTCCATATA-TG--AAT--CTCTGAAATT--AC-A--A-TTA-ATGGAAT--TTATG-ATtcatggttcatttcataatacattagatttaccaaagtgtgaattaaaaatat
gi|5 : CACACCAAC--AGATACC-TTCACT--GA-T-CT------GATGTA--TCCCATTGATTGCTCTT-TTA-CAG-AAA-GGAAA-CATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CAGAAG--TAATCTACAC---TGCTC-T-AT-GA-GACTATT--GCTTTCA-CTAAC----------C--TGGTCAGTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTCCCTCCAA-TCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGC--CTGTT-GTATTATGTATTCCATTATCT-GAGAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTAAGTG--CATTTC-----CT---T---A--ATACTTGTTTCCCTT-TC--ATCT-----TCTT------TCT-----------AATCCTC-TG--------TTCCA--GTAG---C-A---T---CT-----GTA--T----C---------T---CC-C-GC---------------TCA----------T----------ACTC-----CA-CC----ACACACTTTA-CTTTA-CTCACAATCTTATCTACC-T-CTCCATGACTGGACAGAA-CAAGGATTTTAATTCTATGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTTTAAAA-CCGGATTGCTGAAAA-CATCAT-ACAGTTCCATGTTCTGAATGTCTCTATACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA-CGACTCCTCTC-CTCTCATTGTTTTTATCA-TCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTT-AT-C-CCC-TTACTAGAT-GAGGAATTCGCTT--------CTGTTTCTCTTTCTCT-TT-GTGAGCAATACCTTGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATGCAACT-------------------------ACTACTCATATATAACAACATTTGGTCAGGGAACT-GTTTACCATAA-TGATTAGCACATATTTCATACA--GAAA-GT-CATGTATAAATG-TGTAATGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGATAAAGCTTTTACAAACTTGAATGCATCAGTTT-GA-ATTTCTATTTG-ACAATTTTCCAAAGAGCCGCTTTTCAT--ATTCATGAAATGTTCAT--TTTTTCTATCCTT-CAAAATGTCTTTTGAAAGGCAGTTTTCGTTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATACATTCGAC-TGGATTCAGGAAAAACTTGTCACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATCAGATCTACATTT-AAACCATACTTCTGGAGAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGACTTGT---AAG-GC-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTTT-CGACT-TAA-CCATCCA-AGGTTGTGTTAT-T--C--TCAT-TTCAT-A-ACTAA-TTAACACA--TTTAAT-TCTGTTT--TCT-GGAG-GC-CAAAGACTCCCAAAAC-A-TCA---TCAAT-AACAAAAACCTGTGG-TTT-CCTGGGGTAAT--CA--T-AGTCCT-CCA--T-CTCCCTGACATCTTTGGTTGG----CACAA-CCT--CATAT-CCT-TC-CTCCTGG--A-GCTTGAGGGCA-AT-GTGGTGTGCCATGGCAGATTTCCCGGACCCTGGCACGCC-AAC-GAATG---TTAC-ACAAGTTTG-GT--TTCTCACTTTTTCCATCACTGATGGGAAGCTGTG-TGTTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAAT---GGCAATAT--CA--GATTGCTCTGAAA-TA-ACAAACA-TTACATG---T--TAATG-ATTTAACAAAccagaatacaataccataatgtgcttattctatatgacatatatgatag
gi|6 : ATCGAT--GAATATT-TTCACT--GA-T-TG------AATCTA--TCCCATTGATTGCTTCC-TTA-CAG-ATA-GGAAG-CAGAACGCGGACTGTCTGTACA-----------TCACC---------ACTA--TAACAAC-----CCAA---TCC--------------C---T-TTC-T-AC-AA-GCATATT--GTTTTCA-CTTTCATTGGAAGCTT--TATTCAATATATT-CCACAATATATTCCATAATCAATGATGTAGATGGATGTTGATGATCTTCGGCTA-TCTTAAATAATTATCTGAGTTCTT-TGTGTTCTTTAAT--GTGTT-GTATTATACAATCTATTATTT-GATAATGCCCATAGTA-AATAATCCAGCTGATTACTCTCACATTGTATGTA--AATTTATATCCCT---C---ATCAT-CTTGTTTGGGTC-TCCGATCCAAAAGCGAT------CCT-----------G--TCTC-TCCC------ATTCA--TCAAA--C-T---C---CC-----TTC--T----C---------T---CC-CTAT---------------TC-----------T----------CCTC-----CA-CC----ACATGCATTC-GTTTA-ATTAAAATATTATCCGCC-T-CTTTAAGACTGGAGAGAAATAAGGATTTTAATTCTATGTC-TGGCTT-TGTCTCTAACACACCAATAAAGGTCTGACACACCAGGGTATGTTTT-AAAC-CCTGATTCCTGAAAG-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTAGAATC-TCTCTGCTAGCAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGATTCCTCTC--TGTCATTGCTTTTTTCA-TTGCTCTCATTTTTTCTATCACTATCATTGTTACTCCT-AT-T-CCTGTTACTAGATTGAGGA--TCACT---------CTGTTTTTCTTTCA--------------TACCTGGTTCATTTGTC-T-GTGGTTTGAAAGAATTAG-C-AATATAA-T-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--CGGA-GT-CAT----AATTG-TGTAATGTGCACCATTCTGTT-TT-GTGTATGCCCCCTTCAT---TG-CTGACAAAGCTTTTACTAACTTGTATGCATCGGTCT-GG-CTTTCTAATTT-ACAATTTTCCAAAGTGTCAATTTTCAT--ATTCATGAAATGTTCAT--ATTTCCTATCCTT-TAAAATATCTTTTGAGAGGCTGTTTTCATTT-ACCATACAC-AAAACAAGTG-TTGT-ATAATT--CGGTT-CGTTATGTCTT-TGCATATCATCAAGTTCACTAAT-----ATTGGAA-TGGATTAAAAAAAAA-TTG-AACCAAGAGTTTGAAA-TTTCTTT-TCCTTTGAAA-ATA-ATTTACAGAG-AAGAGGA-AACATGCGCGATGTTG--AAGTCAGCAGTGCAGGTGACATTAGATCTACATTT-AAACCATCCTTCTGGAGAATCTGTTTTTTGTAGTTATCATCTAATGCATA-ATCAAAT-T--TGTGTAGCTTAATTAA----TGT--GTCGTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---AC-----------------CTCATT----GA-ACAC-CGT-CT-CTCTACATGTC-AT-CAA--AGATTT-AGAGT-TAT-CCATGCA-GGGCTTTGCTAT-T--T--TCCA-TTGAT-A-ATCAG-TCAACACA--ACTAAT-TTTGTTT--CCT-GGAG-AC-CAAAGACACCCTCACC-A-TCA---TCAAT-GATAAAAACCTGTGG-ACT-TTTAGGATCAC--TA--T-AGTTCT-CAA--T-CTTTCTGATATCTTTGATCGG----CACCA-CCT--CGTAA-CCT-TC-GTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTTCCAGACCCAGGCACGCT-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTTACTTTCTCCATCACTGACGGGAAGCAGTG-GGTTTCATAGTAAAACTTGTCTTCCTCTTTCCATTTCTTAAT---GTCACTAT--CG--AATTGATCTGAAA-CGAACAA--A-
gi|7 : CTCTCTCATTGTT-TTCATCACTTTCTGGTTCACTTGTC-T-GTGGTTTGACATAGTTAG-T-AATATAACT-------------------------ACTACTCATATACAACAACATTTGTTCAGGAAATT-GTTTGCCATAG-TGATAAGCACAGATTTCAAACA--TGGA-GT-CATGCATAAATT-TGTATTGTGCACCACTCTGTT-TT-GTGTATGTCACCTCCAT---TG-CTGATAAAGCATTCATAAAATTAAACCTATCAGTCT-GA-TTTTGTAATTT-ACAACATTTCAAAGTGCTCTTTTTCAT--TTTTTGGAAAATTTCAT--TGTTTGGATCCTC-TAAAATGTTTTCTGAGAGGCTGTTTTCATTT-AGCATACAC-AGAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATTTCATCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAATCAAGAGCTTTGAA-TTTTGTT-TTCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGTGAGATGTTG--ATGTCAGCGATTCAGGTGACAATATATGTTCATCC-AAACCATACTTCTGGAGAATTTGTTTTTTGTCTTTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----ATT--CTCTTC-TTTGGTAA-G-GAATGATTTGT---ATG-GT-A-G-T---GTCAGTCCACTAATACAACCTCATT----GATACAT-ACCTCT-CTCTACATGTC-ACACAA--GTTTCT-AGACT-TAG-CCATGCA-AGGCTGTGTTAT-T--T--TCTTGTCCAT-A-ATCAA--TAACACT--TTTAATCTCTGTTT--CCT-GGAGCAC-CAAAGACAACCACCAC-A-TCAATGCAAAT-AACAAAAA-CTGCGA-ATTCCCTGGGGTCAC--CGACT-AATACTACCAATT-CTTCCTGACGaacagatgaatattaatggagtttat
gi|8 : CACACCAAT--AAATACC-TCTACT--GA-C-CTTTAGGTGACCAA--CCCAATCTATTGCTCTC-TTA-CAG-ACA-GGAAT-CATAACTCTGACTGTCTGTACA-----------TCTCC---------ACTG--TAACAAC-----TCAA---TAGAAG--TAATCTACAC---TGTTC-T-AC-AA-GTATATT--GTTTTC-------------------------------TG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTCCCTGTTA-TCTCAAATACTTCAATTGTTTCGT-TGTGACGTGCAGT--CTGTT-GTATTACGTATTCTATAATCT-GATAATGTCCATAGCA-TATCACCCAGCTGATCACTCTCACATTGTAAGTG--TATTCA-----TC---T---A--ATA-TT-TCTCCCTTGTC--ATTT-----TGTTTCTTCCTCTGATCCACCAGCA--CCTCCTGTCTCCTCCATTCATCCCA----C-T---C---CT-----TCC--T----C---------T---CCTC-AC---------------TC-----------T----------CCTC-----CA-CC----AAACATTTTC-GTTTA-CTCACAACCTTTTCTACC-T-CTCCATGACTGGACAGAAATAAAAATGTTAATTCTTTGT-ATGACTT-CATTTTTAACACACCAATAAAAGCCCGACACACCTGGGGATGTTTT-AAAA-CCAGATTCCTGAAAA-CATCAT-ACAGCTCCATGTTCCGTATGTCTCTGTACAATC-TCTCCGCTAACAGTGGGTACTGATCCTCATGTAGCCTTATACACAGATCAAACGATTCCTCT--CTCTCATTGTTTTCATCA-c
gi|9 : ATTGGAC-TGGATTCAGGAAAAACTTGTTTCCTAGAGCTTGAAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGATGTGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTATTATCTAATTTATG-ATCActttctg
gi|9 : agC-CAAAGAATCCCACCAC-AATCAA--TCAAT-A-CAAAAATCTGCGGGATT-CCTGGGGTCAC--C-----AGTCCT-CTA--T-CTTCC-GACGTTCTTG-TTGG----TACAAACCT--CGTAAGCCT-TC-C-CCTGG--A--TTTGAGGGCG-ATTGTGGTGA------------TTCCCGGACCCAGACCCACC-AAC-AAAGG---TTAT-GCATGGTTG-GT--TTCTGACCTTCGCCATCACTGAATGGAAACTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--TATCGATCTG---------AA--A-TTACATA---T--CGACG-AATTAACGAAannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccaaagaatcccaccacaatcaatcaatacaaaaatctgcgggattcctggggtcaccagtcctctatcttccgacgttcttgttggtacaaacctcgtaagccttcccctggatttgagggcgattgtggtgattcccggacccagacccaccaacaaaggttatgcatggttggtttctgaccttcgccatcactgaatggaaactgtgggtttcatagtaaagcttgtcttcctctctccatttctgaatgtcaatatcgtatcgatctgaaattacatatcgacgaattaacgaacctgatgaatacc
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATGTCCATATTGTATATTTCTGAAATCACATGTTAATGTATTTTTTAAAATCATGGTTCATTTCATAAAACACTAATACTATATGTGCCAAAGTAAACAGAATA
Unaligned ( gi|27 ): TTCGTCTCTAGCAGGGTCTGCAGACACACCAGGGTCTTTTTAGCTGGTTCCTGTAGAGCATCCAGTAATACAG
Unaligned ( gi|29 ): ATGAATATAGAATATTGATGGGTTTTGTTTCTACAA
Alignments
lowQualScore : 11 111111 111 1 44444444444 333333333 111 22222 111 2222222222222 11111111 555555555555555555555555 1 22222222222222 11111111 22222 11111 1111111111111 555555555555555555555555555555555555555555555555 111 1 1 1 1 1 1 111 1 222222222 4444444444444444444444444 1111111111 1 1 1 44444444444444444 11 11111 111 111 111111 1111 11 111 444444444
lowQualScore : 11 0 4 666 4 4 111111 0 000 2 4 4 4 4 1 1 22222222222 555555555 222 00000 444 2 55 777 4 4 4 4 0 666 3 4444444444444 22 1 999999 3 3 44444444 3 3 7 0 44 1 0 8 1 666 8 2 6 8 8 1 44 555555555555555555555555 5 44 77777 888888 22222222222222 2 44444444 66 777 33333 555 22222 77 6666 9999999999999 2 5 666666666666666666666666666666666666666666666666 3 7777 99 3 55 1 1 000 1 2 4 1 4 1 5 0 5 1 55 1 4 1 5 5 7 4 4 5 5 55 777 4 5 3 5 5 5 0 8 66 555555555 0 4 55 1 4 4 1 4 4 4444444444444444444444444 5 5 66 5 5 5 5 5 5 888 5 3 1 1 5 5 5 1 66 999 1 1 66 0 5 5 5 4 4 4 66 4 4 5 0 1 1 0 2 4 8 4 4 4 4 4 66 2 1 4 3 4 5 66 5555555555 5 5 0 0 888 0 5 5 5 888 00000000000000000 9999 4 8 4 4 8 4 00 4 4 4 2 4 4 22222 777 1 111 77 777 4 66 4 4 4 1 8 4 111 4 5 5 4 4 0 555555 4 5 4 0 66 4 1 6 999 5555 5 66 0 5 5 5 66 5 5 5 2 1 4 5 5 888 5 0 5 66 1 4 777 1 66 666 444 111111111 66 4 2 888 66 5 0
lowQualScore : .. . . ... . . ...... . ... . . . . . . . ........... ......... ... ..... ... . .. ... . . . . . ... . ............. .. . ...... . . ........ . . . . .. . . . . ... . . . . . . .. ........................ . .. ..... ...... .............. . ........ .. ... ..... ... ..... .. .... ............. . . ................................................ . .... .. . .. . . ... . . . . . . . . . . .. . . . . . . . . . . .. ... . . . . . . . . .. ......... . . .. . . . . . . ......................... . . .. . . . . . . ... . . . . . . . . .. ... . . .. . . . . . . . .. . . . . . . . . . . . . . . . .. . . . . . . .. .......... . . . . ... . . . . ... ................. .... . . . . . . .. . . . . . . ..... ... . ... .. ... . .. . . . . . . ... . . . . . . ...... . . . . .. . . . ... .... . .. . . . . .. . . . . . . . . ... . . . .. . . ... . .. ... ... ......... .. . . ... .. . .
lowQualScore : 00 8 0 333 0 0 555555 8 222 0 0 0 0 4 1 1 22222222222 666666666 333 00000 000 5 55 000 0 0 0 0 7 333 6 2222222222222 55 2 000000 0 2 55555555 2 2 5 4 88 0 5 0 0 555 0 3 4 9 0 8 22 999999999999999999999999 4 22 77777 888888 66666666666666 9 33333333 88 999 44444 000 11111 99 1111 6666666666666 9 7 222222222222222222222222222222222222222222222222 3 7777 33 6 99 0 0 333 1 9 3 0 1 4 0 1 7 4 77 4 3 4 0 7 9 3 3 0 0 77 000 2 1 2 0 0 0 0 9 11 000000000 1 4 66 1 4 4 7 4 4 4444444444444444444444444 0 0 99 0 0 0 9 0 0 888 0 6 4 0 0 0 0 0 66 111 0 4 99 2 9 0 0 4 4 4 11 4 4 1 7 1 4 1 5 4 9 4 4 4 4 4 11 2 1 4 9 4 0 99 4444444444 0 0 0 2 888 0 0 0 0 888 00000000000000000 4444 4 9 4 4 9 4 66 4 4 4 9 4 4 77777 333 1 444 11 111 4 11 4 4 0 0 0 0 000 0 6 5 0 0 1 000000 4 3 4 9 11 4 8 4 555 6666 0 99 2 0 0 0 99 0 0 0 5 4 2 0 0 888 0 4 0 99 0 4 888 7 77 222 111 777777777 11 4 5 888 99 0 5
consensus : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACCTA--TCCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTC----------C--TGTTCANTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTTCCTGTTA-TCTCANATAATTCACTTGCTTCAT-TGTGTTGTNCAGN--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCA-----CC---C---A--ATACTT-TTTCCCTT-TC--ATCT-----CGTT------TCT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CT-----GTC--T----C---------T---CC-C-AC---------------TCG----------T----------ACTC-----CA-CC----ACACACTCTC-GTTTA-CTCGCNATCTTNTCTACC-T-CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAAA-CCGGATTGCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTANTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATTCACAAACTTGAANGCATCAGTCT-GG-CTTTCTAATTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATATCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATGCA-AGGTTTTGTTAT-T--T--TCNT-TTCAT-A-ATCAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACTGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--AATTGCTCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
Reference ( family-3835 ) : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACCTA--TCCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTC----------C--TGTTCANTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTTCCTGTTA-TCTCANATAATTCACTTGCTTCAT-TGTGTTGTNCAGN--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCA-----CC---C---A--ATACTT-TTTCCCTT-TC--ATCT-----CGTT------TCT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CT-----GTC--T----C---------T---CC-C-AC---------------TCG----------T----------ACTC-----CA-CC----ACACACTCTC-GTTTA-CTCGCNATCTTNTCTACC-T-CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAAA-CCGGATTGCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTANTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATTCACAAACTTGAANGCATCAGTCT-GG-CTTTCTAATTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATATCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATGCA-AGGTTTTGTTAT-T--T--TCNT-TTCAT-A-ATCAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACTGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--AATTGCTCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
gi|1 : CACACCAATCAAGAT--C-TTCAT----A-T-CT------A--CTA---CGCATTGATTGCTTTTCTTA-CAG-ACA-G--AG-CAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTACAAG--TAATCTATAC---TGTTC-T-AC-AA-ATCTAT---GTTTTTA-CTTTC----------CCATGTTCTATACTTGAT----AGAT-TCCCA--------GATT-AGACTGATA-GGA-AACTTCTTGTTA--CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTG--TATTCAAAG--CCA--C---A--AGA----TTCCCCTT-TC--ATTT-----CGTT------TGT-----------A--CCTC-TG--------ATCCA--CGAG---CCA---C---CT-----ATTCAT----C---------TTTCCC-C-AC---------------TCG----------T-------------C-----CA-CA----AAAAAGCCTCTATTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-ACATAAATAAG-ATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTT-AAAAGCCGGAT-GCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTCT--AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTTC----TTCACT-TT-TTGAGCAATACCTGTTCCACTTGTC-TTGTGGTTTGACAGAATTAG-CCAATATAACNNNNNNNNNNNNNNNNNNNNNNNNNCACTACTCATATACAACAGCATTTGTTCAGGAAACT-GTTGGCCATAG-TGATAAGCACAGATTTCAAACA--TAGA-GT-CATGTATAAATG-TGTATTGTGCTCCACTCTGTT-TT-ATGTATGTCCCCTCCAT---TG-CTGACAAAGCATCCATAAACTTAAAACTATCAGTCT-GG-CTTTCTAATTT-ACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTGAAATTTTCAC--TGTTTTTATCCTC-TAAAATATCTTTTGAGAGGCTGTTGTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTGTT-TGCATTTCGTCAATTTCAGCAATGATACGTTGGAC-ATGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAT-ACA-ATTTACTGAG-AAGGGGA-AACATGCGAGATGTTA--ATTTCAGCAATGCAGGTGACATTATATCTTCATTT-AAACCATACTTCTGGAGAATCTGTCTTTTGTCATTATCATTTAATTCGTG-ATCAGAA-C--TGTTTAACCTAATCATACAAGTC--CTCTTCTTTTGGTAA-GTGAATGG-TTGT---AAG-GTAA-G-TTGAGTC----------------CTCATT----GA-ACAC-AGC-CT-TCTTAATTGTCAAT-CAAG-AGTTCT-AGACT-T-A-CCATGCA-AGGTTTGGTTAT-TA-T--TCTG-TTCATAA-ATCAG-CCAATACA--TCTAAT-TTTGTTT--TCT-GGAG-GCACAAGGACCCCCCACACAA-TCA---TC-AT-ACAAAAAACCTGTGG-ATT-CTTTTTGTCAC--GG--T-AATGCT-TTA--T-CGCTCGGATTTCATCGACTGG----TACAA-TCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCTGTGGCAGACTTCCCGGACCCAGGCCCACC-AAC-AAACG---TTAC-ACAAGGTTG-GT--TTCTTACTTTCTCCATCATCGATGGGAAGCTGTG-GGTTTCACAGTAACGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCCATATTATG--AAT--CTCTG---------AA--A-TTACATA---T--TAATGAATTTA
gi|10 : ATACAC-AAAACAAGTG-TTGC-CTAATTACCAGTT-T-TTATGCATT-TGCATTTCGTCAA-TCTATGAATGATAGATTG-AC-TGGATTCAGGAAAAACTTGTAACCAAGAGATTGAAAATTGTGTTCTCCTTCGAAAGACAGATTTACAGAGGAAGGGGACAACATGCGGAGTGGTGTTATTTCAGCAATGCAGGTGACAATAGATCTTCATTT-AAACCATACT-CTGGAGGAACTTGTTTTTGTCATCATTAGTTAAT-CATT-ATCAGAAGC--TGTGTAACTTAATCA------GCTTCTCTTC-TTTGGTAA-G-GAATGGTTTGTTGTAACCGT-AAG-T----T-----------------CTCCTTCTTGAA-ACACCAGC-CTTCTCTACATGTC-AT-CAA--AGTTCTTAGACAATAA-CCATGGC-ACGTTTTGTTAT-T--TCGTCAT-T--AT----TCAGTCCAATACAGTCCTAAT-TTTGTTT--TCTTGGAG-TC-CAAAGACTCCCACCACCA-TCA---TCAATGAACAAAAACCTG--G-ATT-CCTGGGGTCGC--CA--T-AGT-CT-CCA--TTCTTCCTGAC--CTTT--TTGG----TACAA-TCT--C-TAA---T-TC-CTCCTGG--AAGCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGACCCACCAAACAAAACG---TCACAAAAAGGCTGCGT--CTCTAACTGTCTGCAtgatccagataaatagcaataatggtgctttattctataat
gi|11 : tTCTC--TCTCATTGTTTTTATCA-TCACTCTCCTTTTTTCTACCACTATCTTTGCTACTCTT-AC-CTCCC-TCACTAGATTGAGAA--TCACTAGAAGCACTCTGTTTCTCTTTCTCT-TT-GTAAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTATTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTTCAT---TG-CTGACAAGGCATTCACAAACTTGAATGCATCTGTCT-GA-CTTTCTAATTC-ACAATATTTCAAAGTTTTATTTTTCAT--GTTTTTAAAATTTTCAT--TATATTGATCCTC-TAAAATGTTTTCTGAAAGCCTATTTTCATTT-AGCATACAC-ATAACAAGTG-TTAC-ATAATT--AAGTT-TGTTATGTCTT-TGCACATTATCAAGT
gi|12 : CACACCAAT--CAATATC-TTCACT--GA-T-CT------GACCTA--GCGCATTGATTGCTTTC-TTA-CAG-ACA-GGAAG-CAGCACTCTGACTGTCTGTACA-----------TCACC---------ACTG--TAACAAC-----TCAA---TACAAG--TAATCTATAC---TGTTC-T-AC-AA-GTCTATT--GTTTTTA-CTTTC----------C--TGTTCATTACTTG-T----AGATATCCCA--------GATTTAGACTGATATGGAGAACTTCTTGTTA-TCTCATACAATTCACTTGTTTGAT-TGTGTTGTGCAGA--CTGTT-GTATTATATACTCTATTATCT-GATAATGTCCATAGCA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCAAG---CCA--C---A--ATATTT-CCCCCTTT-TC--ATTT-----CGTT------TGT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CTTCTCAATC--T----T---------TC--CC-C-AC---------------TC-----------------------CTC-----CA-CA----AAAAGCTCTC-TTTTC-CTTGCTATCTTATATACC-G-CCTCATGACTGGACAAAAATAAGGATTTTAAT
gi|13 : CTGATCACTCTCACATTGTACGT------CCA-----TC---C---A--ATCCAT-AGTCCCTTATC--ATCT-----CGTT------TCC-----------A--CCTC-TG--------ATGCA--CCAG---C-ACCTC---CT-----GTT--T----C---------C---CC-C-AT---------------TCATCCCTCTCCCT----------ACTCTCCT-TATCC----ACACACTCTC-GTTTA-CTCACTATCTTTTCTACC-T-CCCCATGACTGGACAGAAATAAGG
gi|13 : TTTTTCTTTCACTATCATTGTTACTCTT-ATCC-CCC-TTACTAGATTGAGAA--Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttttctttcactatcattgttactcttatcccccttactagattgagaat
gi|14 : ctgatcactctcacattgtacgtccatccaatccatagtcccttatcatctcgtttccacctctgatgcaccagcacctcctgtttcccccattcatccctctccctactctccttatccacacactctcgtttactcactatcttttctacctccccatgactggacagaaataaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AT-CCCTATT--GTATTTA-CTTTC----------C--TGTTCATTACATG-T----AGATATCCCA--------GATTTAGACTGATGTGGTGAATTTCCTGTGA-TCTCACATAATTCACTTGTTTGAT-TGTGTTGTGCAGT--CTGTT-GTATTATGTACTCTATTATCT-GATGATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTGTCTATTTG----------------------T-TCTCCCTTATC--ATCT-----TGTG------TCC-----------A--CCTC-TG--------ATCCA--CCAG---C-GCCTC---CT-----GTC--T----G---------T---CC-A-AC---------------TCACCC-------C----------ACTC-----CT-CCCTCTCCACACTCTC-CTTCATCACACACTCTCGTTTAC
gi|15 : CATTGATGGGAAGCTGTG-GGTTTCATAGTAAATCTTGTCTTCCTCTCTCCATTTCTGAAT---GTTCATAT--TGTAAATT--TCTGAAA-TC-ACAA--G-TTA-ATG---TACTAATC-AT
gi|16 : cctggcgttagaagagtgctgtacagttttctctctccaaaaacatttccagccgATACCAAT--CAATACCCTTCACTCGAA-TACT------AACCTAAATTCCATTGATTGCTCTTCTTA-CAGTACAAGGAAGACATA-CTCT-ACGGTCTGCACA-----------TCTCC---------ACTA--TAACCAC-----TCAA---TACAAAGTTAATCTACACTAGTGCTC-TGAC-AATCCCTATTTGGTTTACA-Cagttcatttcataagacactagatctgtcaaagtgaaccgaat
gi|17 : aCATT----GA-ACAC-AAT-CT-CTCTACATGTC-AT-CAG--TGTTCT-AGACC-TTT-TCATGCATCGATTTT-TTATAT--T--TCGT-TT-AT-G-ATCTG-CCAACATG--TCTAAT-TTCGTTT--TCT-GCAG-AC-CAAGGACACCCACCAC-A-TCG---TCAAT-GACAAAAACCTGTGG-ATT-
gi|18 : TGAGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCGTCCTCTCTCCATTTCTGAATGTAGTCAATAT--CG--TATTGATCTA---------AA--A-TTACATA---T--TAACG-AATTAACAAA
gi|19 : TGTCCATAATA-AATCACCCAGCTGATCACCCTCACATTccagttaaataccaataataatactatattctataacata
gi|2 : gCACACCAAC--AGATACC-TTCACT--GAAT-CT------GATGTA--TCCCATCGATTGCTCTT-TTAACAG-AAA-GGAAA-CATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CA-GAG--TAAT-TACAC---TGCTCCT-ATTGA-GACTATT--GCTTTCAACTTAC----------C--TGGTCAGTACATG-T----ATATATTCCA--------GATTTAGACTGATGTGGAGAATTCCCTCCAAATCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGCACCTGTT-GTATTATGTATTCCATTATCT-GAGAATGTCCG-AGTA-AATCACCCAGCTGATCA-TCTCACATTGTAAGTG--CATTTC-----CT---T---A--ATACTTGTTTCCCTT-TC--ATCT-----TCTT------TCT-----------AATCCTC-TG--------TTCCAG-TTAG---C-A---T---CT-----GTA--T----C---------T---CC-C-GC---------------TCA----------T----------ACTC-----CA-CC----ACACACTTTA-CTTTA-CTCACAATCTTATCTACCCT-CTCCATGACTGGACAGAAACAAGGATTTTAATTCTATGT-ATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-TAAA-CCGGATTGCTGAAAA-CATCAT-ACAGTTCCATGTTCTGTATGTCTCTATACAATCCTCTCTTCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA--GACTCC-CTCTCTCTCATTG-TTTTATCAATCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTTTAT-C-CCCCTTACTAGATTGAGAA--TCGCT---------CTGTTTCTCTTTCTCT-TTTGTGAGCAATACTTG-TTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATGCAACT-------------------------CCTACTCAT-TATAACAACATTTGGTCAGGGAACT-GTTTACCATAAATGATTAGCACATATTTCATACA--GAAA-GT-CATGTATAAATG-TGTAATGTGCACCA-TCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGATAAAGC-TTTACAAA--TGAATGCATCAGTTT-GAATTTTCTAATTTGACAATTTTCCAAAGAGCCGCTTTTCATTTATTCAT-AACCGTTCAT--TTTTT-TATCTTC--AAAATGTCTTTTGAAAGGCAGTTTTCGTTT-AGCCAACAC-AAA-CAAGTG-TTGC-ATAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATA-ATTCGAC-TGGATTCAGGAAAAACTTGTCACCAATAGCTTGGAA-TTTGTTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTACATTT-AAACCATACTTCTGGAGAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC----GGC--CTCTTC-TTTGGTAACG-GAATGACTTGT---AAGTGC-A-G-T---GT-----------------CTCATT----GA-ACACAAGC-CT-CTCTACATGTC-AT-CAA--AGTTTT-CGACT-TAA-CCATCCA-AGGTTGTGTTAT-T--C--TCAT-TTCAT-ATACTAA-TTAACACA--TTTAAT-TCTGTTTTATCT-GGAG-GC-CAAAGACTCCCAAAAC-A-TCA---TCAAT-A--AAAAACCTGGTG-GTT--CTGGGGTAAT--CA--T-AGTCCT-CCA--T-C-CCCTGACATCTTGGGTTGGC---CACAA-CCT--CATAT-CCT-TCGCTCCTGG--A-GCTTGAGGGCA-AT-GTGGTGTGCCATGGCAGA-TTCCCGGACCCTGGCACGCC-AAC-GAATG---TTAC-ACAAGTTTG-GTGGTTCTCACTTTTTCCATCACTGATGGGAAGCTGTGTGTTTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAAT---GGCAATAT--CA--GATTGCTCTGAAA-T--ACAA--ACTTACATG---T--TAATG-ATTTAACAAcctcttgacatccactagcaacctctgtctatccctctcctcactccactcatcccagtcctcactctc
gi|21 : CC-TTGCTACATTGAGAA--TCACT-----------GTTTCTCTTTCACT-TT-GGGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACAGAATTAG-C-AATATAACT-------------------------ACTACACATATAccaaatgaatatagaatattgatgggtttttgtttctataatgtagttgt
gi|22 : ACTCTCACATTGTACGTG--TATTCA-----CCATTC---A--A----T-TTTCCCTTATC--ATCT-----CGTT------TAT-----------C--CCTC-TG--------ATCCA--CCAG---C-ACCTC---CT-----CCC--T----C---------T---CC-CAAC---------------TC
gi|23 : GCTGATCACTCTCACATTGTACGTG--TGT-----------------A--TTAC-T-TTTCCCTT-----ATCT-----ACTT------TCG-----------C--CCTC-TG--------ATCCA--CCAG---C-A---CCCACT-----GTC--T----C---------C---TC-C-AC---------------TC----------------------ACCC-----CG-Ctccttct
gi|24 : CTC-TG--------ATCCA--CCAGTGTC-T---C---CT-----GTC--T----CACCGACTCAC---CC-C-AC---------------TCA----------TCTCTCTCCTCACTCTCTTCCT-CC----ACGCTCTCTC-GTTTA-CTGACTATCTTTTCTAtcc
gi|25 : -CTTTC----------C--TGTTCATTACATG-T-------------A--------GAT-----------------ATT-CCTGTTA-TCTCATACAATTCACGTGTTTCAT-TGTGTTGTTCAGT--CTGTT--CATTATGT
gi|26 : GTG--TGTTCA-----TC---CTTTA--AT-CTT-TCTCCCTTATC--ATCT-----CGTT------TCT-----------C--TCTC-TG--------ATCCA--CCAG---C-ATCTC---CT-----GTC--T----C---------C---TC-C-
gi|28 : CACACCAAT--AGATACC-TTTACT--GA-C-CT------GACGTA--TCCCATTGATTGCTTAT-TCA-CAG-ACA-GG
gi|3 : tCACCACT--CGATACC-TATACT--GA-T-CT------GACCAA--TCCCATTGATTGCTTTT-TGA-CAG-ACA-GGACG-CAGAACAACGACTGTCTGTACA-----------TCACC---------ACTA--AAGCAAC-----TCAA---CAGAAG--TAATCTACAC---TGCTC-T-GT-AC-GTCTACT--GTTTTCA-CTTTC----------T--TGCTTGTTACACG-T----ATATATCCCA--------GATTTAGATTGATGTGAATAATTTCCTGTTA-TCTCAAATAATTCACTTGTTTCAT-TGTGTTGTTCCAT--CTGTT-GCACGATGTACTTTAACATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATAACTCTCATATTGTA--------TTCC-----CG---C---C--ATAATA-TTTC------------T-----CGTT------TCT-----------C--CCTC-TC--------ATCTA--GCAG---C-A---C---TTTTT--GTC--TTCCCC---------T---CT-C-ACCCCGCACCCTCTTCTTCC----------T----------ACTCTCCTTCT-CC----ACACACTCTT-GTTTA-CTCACTATCTTATCTATC-T-CTCCCCGACTGGACAGAAATAAGGATTTCAATTCTGTGT-ATGACTT-TTTCTCTAACACGTCAACAAAAGCCTGACACACACAGGAATGTTTT-AAGA-CCTGATTCCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACACTC-TCTCTGCTAGTAGTGGGTACTGATCCTCACATAACCTTATACACAGATCAAA----TCCTCTC--TCTCATTGTTTTTATCA-TCATTCTCCTTTTTTCTATCACTGTCATTGCTACTCTT-AT-CACCT-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GGGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCAAATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTATTGTGCACCACTCTTTT-TTTGTGTATGTCCCCTCCAT---TG-CTGACAAAGCATCCAAAAATTTAAAAGTATCAGTGC-AG-TATTCTAATCT-GCAATTTTCCAAAGTGTCAATTTTCAT--TTTCATGAAATATTCAT--TTTGAATATCCTT-TAAAACACTTTTTGAGAGGCCATTTTCACTT-AGCATACAC-AAAACAAGTG-TTGT-GTAATT--CAGTT-TGTTATGTCTT-TGCACATTATCAAGTTCATCAATAATACATTGAAC-TGGGTTCAGAAAAAACTTGGAGCCAAGAGTTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-GTTTACAGAG-AAGGGGA-AACATGCAAGATGTTG--ATGTCAGCAATGCAGGTGACATTATATCTTCATTT-AAACCATATTTCTGGAGAATTTGTCTTTTGTCATTGTCATTTAATGTATT-ATCAGAA-C--TGTGTAACTTAATCAC----AGT--CTCCTC-TTTGGTAA-A-GAATGGATTAT---AAG-GC-T-G-T---GT-----------------CTCATT----AA-ACAC-AGT-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATACA-AGGTTTCGTTAT-T--C--TCTG-TTCAT-A-ATCAG-TCAATGCA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAAACTCCTACAAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CTTTGTGTCAC--AG--T-ATTGCT-TTA--T-TTCTCGGATTTCATCAACTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCATGGCGGACTTCCAGGACCCAGACCCACC-AAC-AAACA---TTAC-GCAAGGTTG-GT--TTCTAACTTTCTGAATCACTGACGTGAAACTGTG-TGTTTCATAGTAAAGCTTGTCTTCCCCTTTCCATTTTTTAAT---GTCCATATTGTG--AATT--TCTG---------AA--A-TCACATG---T--TAATG----TAATAA
gi|4 : tgACACCAATCAAGAT--C-TTCAT----A-T-CT------A--CTA---CGCATTGATTGCTTTTCTTA-CAG-ACA-G--AG-CAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTACAAG--TAATCTATAC---TGTTC-T-AC-AA-ATCTAT---GTTTTTA-CTTTC----------CCATGTTCTATACTTGAT----AGAT-TCCCA--------GATT-AGACTGATA-GGA-AACTTCTTGTTA--CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTG--TATTCAAAG--CCA--C---A--AGA----TTCCCCTT-TC--ATTT-----CGTT------TGT-----------A--CCTC-TG--------ATCCA--CGAG---CCA---C---CT-----ATTCAT----C---------TTTCCC-C-AC---------------TCG----------T-------------C-----CA-CA----AAAAAGCCTCTATTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-ACATAAATAAG-ATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTT-AAAAGCCGGAT-GCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTC-T-AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTT----CTTCACT-TT-TTGAGCAATACCTGTTCCACTTGTCTT-GTGGTTTGACAGAATTAGCC-AATATAACC-------------------------ACTACTC--ATACAAC-ACATTTGTTCAGGAAACTAGTTAGCCATAG-TGATAAGCACAGATTTCAAACATTTAGACGTCCAGTTATAAATGTTGTA-TGTGCTCCACTCTGTTATT-ATGTATGT-CCCTCCATAACTGCCTGACAAA--ATCCATAAACTTAAAACTATCA-TCTGGG-CTTTCT-ATTT-ACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTGAAATGTTCACTGTTTTTTTATCCTCATAACATATC-TTTGAGA-GCTGTTGTCATTTAAGCATACACAAAAACAAGTGTTTGCAATAATT--CAGTTCTGGTATGTGTTATGCAT-TCGTCAATTTCAGCAATGA-ACGTTGGACATTGATTCAGGAAAAACTT-TAACCAAGAGCTTGGAATTTTTGTT-TTCTTTGAAT-AAA-ATTTACTG----AAGGGA-AACATGCGAGATGTTA--A-TTCAGCAATGCAGG-GACA-TATATCTTCATTTAAAACCATACTT-TGAGGAATCTG-TCTTTGTCATTTATATTTAATTTGTGTATCAGAA-CGTTGT-TAACCTAATCAC----AGT--CTCTCT-TTTGGTAA-GTGAATGG-TTGT---AAG-GT-A-GTT---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTTAATGTCAAT-CAATGTGTTCT-AGACT-TAACCCAT-CA-AG--TTGGTTAT-CTAT--TCTG-TTCATAA-ATCAG-CCAATAC---TCTAAT-TTTGTTT--TCT-GGAG-G--CAAAGACCCCCACCAG-A-TCA---TCAAT-ACAAAAAACCTGTGG-ATT-CTTTTTGTCACAGGG--TAAATGCT---G--T-ATCGCTG--GATTTC-ATCGGACTCTACAA-TCTTGCGTAA-CCTATC-CT-CTGGTCA-GC-TGA-GGCGAAT-GT-GTGA--CGT-GCAGACTTCCC-GACCCAGGCCC-CC-AAC-AAACGCCCTTAC-ACA-------GT--TT-TTACTTTCTCCATCATCGATAGG-AGCTG-G-GGTTTCACAGTAACGCTTGTCTT-CTCTCTCCATTTCTGAAT---GTCCATATA-TG--AAT--CTCTGAAATT--AC-A--A-TTA-ATGGAAT--TTATG-ATtcatggttcatttcataatacattagatttaccaaagtgtgaattaaaaatat
gi|5 : CACACCAAC--AGATACC-TTCACT--GA-T-CT------GATGTA--TCCCATTGATTGCTCTT-TTA-CAG-AAA-GGAAA-CATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CAGAAG--TAATCTACAC---TGCTC-T-AT-GA-GACTATT--GCTTTCA-CTAAC----------C--TGGTCAGTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTCCCTCCAA-TCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGC--CTGTT-GTATTATGTATTCCATTATCT-GAGAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTAAGTG--CATTTC-----CT---T---A--ATACTTGTTTCCCTT-TC--ATCT-----TCTT------TCT-----------AATCCTC-TG--------TTCCA--GTAG---C-A---T---CT-----GTA--T----C---------T---CC-C-GC---------------TCA----------T----------ACTC-----CA-CC----ACACACTTTA-CTTTA-CTCACAATCTTATCTACC-T-CTCCATGACTGGACAGAA-CAAGGATTTTAATTCTATGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTTTAAAA-CCGGATTGCTGAAAA-CATCAT-ACAGTTCCATGTTCTGAATGTCTCTATACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA-CGACTCCTCTC-CTCTCATTGTTTTTATCA-TCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTT-AT-C-CCC-TTACTAGAT-GAGGAATTCGCTT--------CTGTTTCTCTTTCTCT-TT-GTGAGCAATACCTTGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATGCAACT-------------------------ACTACTCATATATAACAACATTTGGTCAGGGAACT-GTTTACCATAA-TGATTAGCACATATTTCATACA--GAAA-GT-CATGTATAAATG-TGTAATGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGATAAAGCTTTTACAAACTTGAATGCATCAGTTT-GA-ATTTCTATTTG-ACAATTTTCCAAAGAGCCGCTTTTCAT--ATTCATGAAATGTTCAT--TTTTTCTATCCTT-CAAAATGTCTTTTGAAAGGCAGTTTTCGTTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATACATTCGAC-TGGATTCAGGAAAAACTTGTCACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATCAGATCTACATTT-AAACCATACTTCTGGAGAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGACTTGT---AAG-GC-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTTT-CGACT-TAA-CCATCCA-AGGTTGTGTTAT-T--C--TCAT-TTCAT-A-ACTAA-TTAACACA--TTTAAT-TCTGTTT--TCT-GGAG-GC-CAAAGACTCCCAAAAC-A-TCA---TCAAT-AACAAAAACCTGTGG-TTT-CCTGGGGTAAT--CA--T-AGTCCT-CCA--T-CTCCCTGACATCTTTGGTTGG----CACAA-CCT--CATAT-CCT-TC-CTCCTGG--A-GCTTGAGGGCA-AT-GTGGTGTGCCATGGCAGATTTCCCGGACCCTGGCACGCC-AAC-GAATG---TTAC-ACAAGTTTG-GT--TTCTCACTTTTTCCATCACTGATGGGAAGCTGTG-TGTTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAAT---GGCAATAT--CA--GATTGCTCTGAAA-TA-ACAAACA-TTACATG---T--TAATG-ATTTAACAAAccagaatacaataccataatgtgcttattctatatgacatatatgatag
gi|6 : ATCGAT--GAATATT-TTCACT--GA-T-TG------AATCTA--TCCCATTGATTGCTTCC-TTA-CAG-ATA-GGAAG-CAGAACGCGGACTGTCTGTACA-----------TCACC---------ACTA--TAACAAC-----CCAA---TCC--------------C---T-TTC-T-AC-AA-GCATATT--GTTTTCA-CTTTCATTGGAAGCTT--TATTCAATATATT-CCACAATATATTCCATAATCAATGATGTAGATGGATGTTGATGATCTTCGGCTA-TCTTAAATAATTATCTGAGTTCTT-TGTGTTCTTTAAT--GTGTT-GTATTATACAATCTATTATTT-GATAATGCCCATAGTA-AATAATCCAGCTGATTACTCTCACATTGTATGTA--AATTTATATCCCT---C---ATCAT-CTTGTTTGGGTC-TCCGATCCAAAAGCGAT------CCT-----------G--TCTC-TCCC------ATTCA--TCAAA--C-T---C---CC-----TTC--T----C---------T---CC-CTAT---------------TC-----------T----------CCTC-----CA-CC----ACATGCATTC-GTTTA-ATTAAAATATTATCCGCC-T-CTTTAAGACTGGAGAGAAATAAGGATTTTAATTCTATGTC-TGGCTT-TGTCTCTAACACACCAATAAAGGTCTGACACACCAGGGTATGTTTT-AAAC-CCTGATTCCTGAAAG-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTAGAATC-TCTCTGCTAGCAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGATTCCTCTC--TGTCATTGCTTTTTTCA-TTGCTCTCATTTTTTCTATCACTATCATTGTTACTCCT-AT-T-CCTGTTACTAGATTGAGGA--TCACT---------CTGTTTTTCTTTCA--------------TACCTGGTTCATTTGTC-T-GTGGTTTGAAAGAATTAG-C-AATATAA-T-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--CGGA-GT-CAT----AATTG-TGTAATGTGCACCATTCTGTT-TT-GTGTATGCCCCCTTCAT---TG-CTGACAAAGCTTTTACTAACTTGTATGCATCGGTCT-GG-CTTTCTAATTT-ACAATTTTCCAAAGTGTCAATTTTCAT--ATTCATGAAATGTTCAT--ATTTCCTATCCTT-TAAAATATCTTTTGAGAGGCTGTTTTCATTT-ACCATACAC-AAAACAAGTG-TTGT-ATAATT--CGGTT-CGTTATGTCTT-TGCATATCATCAAGTTCACTAAT-----ATTGGAA-TGGATTAAAAAAAAA-TTG-AACCAAGAGTTTGAAA-TTTCTTT-TCCTTTGAAA-ATA-ATTTACAGAG-AAGAGGA-AACATGCGCGATGTTG--AAGTCAGCAGTGCAGGTGACATTAGATCTACATTT-AAACCATCCTTCTGGAGAATCTGTTTTTTGTAGTTATCATCTAATGCATA-ATCAAAT-T--TGTGTAGCTTAATTAA----TGT--GTCGTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---AC-----------------CTCATT----GA-ACAC-CGT-CT-CTCTACATGTC-AT-CAA--AGATTT-AGAGT-TAT-CCATGCA-GGGCTTTGCTAT-T--T--TCCA-TTGAT-A-ATCAG-TCAACACA--ACTAAT-TTTGTTT--CCT-GGAG-AC-CAAAGACACCCTCACC-A-TCA---TCAAT-GATAAAAACCTGTGG-ACT-TTTAGGATCAC--TA--T-AGTTCT-CAA--T-CTTTCTGATATCTTTGATCGG----CACCA-CCT--CGTAA-CCT-TC-GTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTTCCAGACCCAGGCACGCT-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTTACTTTCTCCATCACTGACGGGAAGCAGTG-GGTTTCATAGTAAAACTTGTCTTCCTCTTTCCATTTCTTAAT---GTCACTAT--CG--AATTGATCTGAAA-CGAACAA--A-
gi|7 : CTCTCTCATTGTT-TTCATCACTTTCTGGTTCACTTGTC-T-GTGGTTTGACATAGTTAG-T-AATATAACT-------------------------ACTACTCATATACAACAACATTTGTTCAGGAAATT-GTTTGCCATAG-TGATAAGCACAGATTTCAAACA--TGGA-GT-CATGCATAAATT-TGTATTGTGCACCACTCTGTT-TT-GTGTATGTCACCTCCAT---TG-CTGATAAAGCATTCATAAAATTAAACCTATCAGTCT-GA-TTTTGTAATTT-ACAACATTTCAAAGTGCTCTTTTTCAT--TTTTTGGAAAATTTCAT--TGTTTGGATCCTC-TAAAATGTTTTCTGAGAGGCTGTTTTCATTT-AGCATACAC-AGAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATTTCATCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAATCAAGAGCTTTGAA-TTTTGTT-TTCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGTGAGATGTTG--ATGTCAGCGATTCAGGTGACAATATATGTTCATCC-AAACCATACTTCTGGAGAATTTGTTTTTTGTCTTTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----ATT--CTCTTC-TTTGGTAA-G-GAATGATTTGT---ATG-GT-A-G-T---GTCAGTCCACTAATACAACCTCATT----GATACAT-ACCTCT-CTCTACATGTC-ACACAA--GTTTCT-AGACT-TAG-CCATGCA-AGGCTGTGTTAT-T--T--TCTTGTCCAT-A-ATCAA--TAACACT--TTTAATCTCTGTTT--CCT-GGAGCAC-CAAAGACAACCACCAC-A-TCAATGCAAAT-AACAAAAA-CTGCGA-ATTCCCTGGGGTCAC--CGACT-AATACTACCAATT-CTTCCTGACGaacagatgaatattaatggagtttat
gi|8 : CACACCAAT--AAATACC-TCTACT--GA-C-CTTTAGGTGACCAA--CCCAATCTATTGCTCTC-TTA-CAG-ACA-GGAAT-CATAACTCTGACTGTCTGTACA-----------TCTCC---------ACTG--TAACAAC-----TCAA---TAGAAG--TAATCTACAC---TGTTC-T-AC-AA-GTATATT--GTTTTC-------------------------------TG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTCCCTGTTA-TCTCAAATACTTCAATTGTTTCGT-TGTGACGTGCAGT--CTGTT-GTATTACGTATTCTATAATCT-GATAATGTCCATAGCA-TATCACCCAGCTGATCACTCTCACATTGTAAGTG--TATTCA-----TC---T---A--ATA-TT-TCTCCCTTGTC--ATTT-----TGTTTCTTCCTCTGATCCACCAGCA--CCTCCTGTCTCCTCCATTCATCCCA----C-T---C---CT-----TCC--T----C---------T---CCTC-AC---------------TC-----------T----------CCTC-----CA-CC----AAACATTTTC-GTTTA-CTCACAACCTTTTCTACC-T-CTCCATGACTGGACAGAAATAAAAATGTTAATTCTTTGT-ATGACTT-CATTTTTAACACACCAATAAAAGCCCGACACACCTGGGGATGTTTT-AAAA-CCAGATTCCTGAAAA-CATCAT-ACAGCTCCATGTTCCGTATGTCTCTGTACAATC-TCTCCGCTAACAGTGGGTACTGATCCTCATGTAGCCTTATACACAGATCAAACGATTCCTCT--CTCTCATTGTTTTCATCA-c
gi|9 : ATTGGAC-TGGATTCAGGAAAAACTTGTTTCCTAGAGCTTGAAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGATGTGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTATTATCTAATTTATG-ATCActttctg
gi|9 : agC-CAAAGAATCCCACCAC-AATCAA--TCAAT-A-CAAAAATCTGCGGGATT-CCTGGGGTCAC--C-----AGTCCT-CTA--T-CTTCC-GACGTTCTTG-TTGG----TACAAACCT--CGTAAGCCT-TC-C-CCTGG--A--TTTGAGGGCG-ATTGTGGTGA------------TTCCCGGACCCAGACCCACC-AAC-AAAGG---TTAT-GCATGGTTG-GT--TTCTGACCTTCGCCATCACTGAATGGAAACTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--TATCGATCTG---------AA--A-TTACATA---T--CGACG-AATTAACGAAannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccaaagaatcccaccacaatcaatcaatacaaaaatctgcgggattcctggggtcaccagtcctctatcttccgacgttcttgttggtacaaacctcgtaagccttcccctggatttgagggcgattgtggtgattcccggacccagacccaccaacaaaggttatgcatggttggtttctgaccttcgccatcactgaatggaaactgtgggtttcatagtaaagcttgtcttcctctctccatttctgaatgtcaatatcgtatcgatctgaaattacatatcgacgaattaacgaacctgatgaatacc
blockSeqs : CA C TCG A A TTAGGT AAT C A T A A G G GATTTTTATTT CAAAAAAAA TGT AATTT AAT C GT TAG C G T T TTG A ATTGGAAGCTT AT T CCACA G A TAATCAAT T T G AT T G G CAC T T T T C C TC TATCCCTCATCATCTTG A CG AAAAG TCTTCC GATCCACCAGCA C TCTCCTCC TC TGT ACCT CCA TCTCA CA TCCC ACCGACTCAC T A CCCGCACCCTCTTCTTCCTACTCTCCTT T CTCT TA T TG T A CT G G C A T C A G T G TG A C C A C T G C T A AC TCT T T T A T C T C AT AGAAGCACT G TG G T . T C . . A A TT C C T T A T AAC C A C T G A G A AT TTA T T TG T A A A T A AC C A T G G G A A C G G G C TT A G A G T G GT GCTT . C T T TGT C . A T . CAGTCCACTAATACAAC CTTG T C T T A A TG T A C G T A TCG TTG C AT TC AGT C TA T C . T C A ATG G A T G C AGGG A C A AT T T A GGG ACTC A TG G A G TC A A T G C A A A CCC A C GG A T GTA C TG TAA TGA AAACGAAC AC C C GAA AC .
blockSeqs : . . T . . . G C . . . . T G . . G . . C . . . . . . T . CCA AT A AT G A . T T G T C . G A . T T . . C . AGCCACAATATTT A . . . AAT . CC G A GCCT . TTT . . TTTC . T TCATCTCTCTCCTCACTCTCTTC . . T . CA T T CG G G C G T . A A . . TC . C . A . G G C T A AC CT T T T . . . A G . T . G G . . T . . . . . . . . . A . . . . A T T . . . T GC G A G . A . . . . . . . . A G G C . T . . . . . . T G . G . . . CGGC . . . C . T . . . . . . . A . . . . . . . . G . . TAT AT C AA C G . . . . . A . . A . A G . . CGAC . G . . . T T CAA C . . . . . . . . . G C G . . . . . . C . . A A T TGC AAATCAC . . C . . .
blockSeqs : . . T . . . T . . . . . T G . . A . . C . . . . . . T . C AG A T T A . T T G T A . T T . T T . . C . TCCTTTAATCTT A . . . AAT . . . . ACCT . . . . TC . . TCATCCCTCTCCCTACTCTCCT . . G . CA A G G G G C C C . A G . . TG . C . A . G G C T A AC CT C T T . . . . . . . . G G . . G . . . . . . . . . T . . . . A C A . . . T AA T A A . T . . . . . . . . A G C C . . . . . . . . T T . T . . . CAGT . . . A . . . . . . . . . . . . . . . . . . C . . T GT C G T A . . . . . T . . . . A C . . CA . G . . . G G TGG . . . . . . . . . . G C A . . . . . . A . . A . G TGC AAATTAC . . C . . .
blockSeqs : . . T . . . T . . . . . G G . . A . . G . . . . . . T . C AT A T T A . T T T T T . T T . T C . . A . CTTAATACTTG A . . . A . . . . ATCT . . . . C . . TCACCCCACTC . . C . CA A A T G G C A . . A T . . TC . C . A . G G C T A A T T T T . . . . . . . . G T . . T . . . . . . . . . A . . . . T C A . . . A TT G T G . C . . . . . . . . A T C C . . . . . . . . T T . G . . . CAGT . . . C . . . . . . . . . . . . . . . . . . A . . C AT C A T A . . . . . T . . . . C T . . CA . C . . . T A TGA . . . . . . . . . . G T G . . . . . . T . . C . A TGA AAATAAC . . C . . .
blockSeqs : . . T . . . T . . . . . G G . . A . . C . . . . . . T . C GT A T G A . T T G T A . T T . T T . . C . AAGCCACAAGA G . . . A . . . . CA . . . . T . . TCATACTC . . C . GA T T T G G C A . . A G . . TC . C . A . G G C T A C T C T T . . . . . . . . T G . . G . . . . . . . . . A . . . . T C T . . . T GC A A G . C . . . . . . . . A G G C . . . . . . . . T G . G . . . CGGC . . . T . . . . . . . . . . . . . . . . . . C . . C TG G A C A . . . . . C . . . . A T . . AG . T . . . T A CA . . . . . . . . . . G C G . . . . . . C . . C . A CGA AAATAC . . C . . .
blockSeqs : . . T . . . T . . . . . T G . . A . . G . . . . . . T . C TA T T T A . T T T T T . G A . T T . . C . CTTAATACTTG . . . . A . . . . A . . . . T . . TCATACTC . . G . CA T A T G G . T . . . . . . G . . . . . . . . . . . C T C T . . . . . . . . G G . . T . . . . . . . . . T . . . . A A T . . . T AA A A G . G . . . . . . . . A G T . . . . . . . . . A G . G . . . ATGT . . . T . . . . . . . . . . . . . . . . . . G . . C TG C A T A . . . . . T . . . . A T . . CA . A . . . T G TG . . . . . . . . . . . . A . . . . . . T . . A . G T . . . . . . .
blockSeqs : . . T . . . T . . . . . G G . . A . . C . . . . . . T . T AG A T T A . T T G T A . T C . C A . . C . TCCAATCCAT . . . . C . . . . A . . . . T . . TCTCCTC . . G . CA T T T G A T . . . . . . . . . . . T G . . G . . . . . . . . . . . . . . . . C . . . A CT T T T . . . . . . . . . . T G C . . . . . . . . . T T . T . . . CATT . . . . . . . . . . . . . . . . . . . . . . G . . T AT . A T T . . . . . A . . . . A C . . TA . C . . . T G T . . . . . . . . . . . . . . . . . . . G . . A . A T . . . . . . .
blockSeqs : . . T . . . C . . . . . T . . . G . . G . . . . . . T . C AA A T T . . . . . T A . T T . T . . . A . CGCCATAATA . . . . C . . . . A . . . . C . . TCTCCTC . . C . TA A A T . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . G . . . . . . . . . . . . . . . . . T CA . . . . . . . . . A . . . . . C . . C . . . . . . . . . A . T C . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . A . G T . . . T . CCATTCAAT . . . . C . . . . T . . . . C . . TCACCC . . G . CA A A . T . . . . . . . .
blockSeqs : . A . TCTAATATT . . . . C . . . . A . . . . T . . TCCTC . . G . G A T
blockSeqs : . . ATTACT . . . . A . . . . A . . . . T . . TCGTC .
blockSeqs : . T . . . . G . . . . T . . . . T . .
blockSeqs : . . . . T . . . . T . .
blockSeqCons : ** T** T** *********** ********* A** ***** *** T** C************ T***** T* A**** ** T************ G* CA T** TC ************************* CGGT****** *** ***************** ** C**** A** ** TGA
originalCons : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACCTA--TCCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTC----------C--TGTTCANTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTTCCTGTTA-TCTCANATAATTCACTTGCTTCAT-TGTGTTGTNCAGN--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCA-----CC---C---A--ATACTT-TTTCCCTT-TC--ATCT-----CGTT------TCT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CT-----GTC--T----C---------T---CC-C-AC---------------TCG----------T----------ACTC-----CA-CC----ACACACTCTC-GTTTA-CTCGCNATCTTNTCTACC-T-CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAAA-CCGGATTGCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTANTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATTCACAAACTTGAANGCATCAGTCT-GG-CTTTCTAATTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATATCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC----GGC--CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATGCA-AGGTTTTGTTAT-T--T--TCNT-TTCAT-A-ATCAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACTGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--AATTGCTCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
finalCons : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACCTAT--CCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTCC------------TGTTCANTACATGT-----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTTCCTGTTAT-CTCANATAATTCACTTGCTTCAT-TGTGTTGTNCAGN--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCA-----CC---C---A--ATACTT-TTTCCCTT-TC--ATCT-----CGTT------TCT-----------A--CCTC-TG--------ATCCA--CCAG---CA----C---CT-----GTC--T----CT------------CC-C-AC---------------TCG----------T----------ACTC-----CA-CC----ACACACTCTCG-TTTA-CTCACNATCTTNTCTACCT--CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAAA-CCGGATTCCTGAAAA-CATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTANTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATTCACAAACTTGAANGCATCAGTCT-GG-CTTTCTAATTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATATCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCACGGT------CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATGCA-AGGTTTTGTTAT-TC----TCNT-TTCATA--ATCAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACTGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--AATTGATCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATGTCCATATTGTATATTTCTGAAATCACATGTTAATGTATTTTTTAAAATCATGGTTCATTTCATAAAACACTAATACTATATGTGCCAAAGTAAACAGAATA
Unaligned ( gi|27 ): TTCGTCTCTAGCAGGGTCTGCAGACACACCAGGGTCTTTTTAGCTGGTTCCTGTAGAGCATCCAGTAATACAG
Unaligned ( gi|29 ): ATGAATATAGAATATTGATGGGTTTTGTTTCTACAA
Alignments
lowQualScore : 11 111111 111 1 44444444444 333333333 111 22222 111 2222222222222 11111111 555555555555555555555555 1 22222222222222 11111111 22222 11111 1111111111111 555555555555555555555555555555555555555555555555 111 1 1 1 1 1 111 1 222222222 4444444444444444444444444 1111 1 1 1 44444444444444444 11 111 111 111111 1111 11 11 444444444
lowQualScore : 11 0 4 666 4 4 111111 0 000 2 4 4 4 4 1 1 22222222222 555555555 222 00000 444 2 55 777 4 4 4 4 0 666 3 4444444444444 22 1 999999 3 3 44444444 3 3 7 0 44 1 0 8 1 666 8 2 6 8 8 1 44 555555555555555555555555 5 44 77777 888888 22222222222222 2 44444444 66 777 33333 555 22222 77 6666 9999999999999 2 5 666666666666666666666666666666666666666666666666 3 7777 99 3 4 1 1 000 1 2 4 1 4 1 5 0 5 1 4 1 5 5 7 4 4 5 5 55 777 4 5 3 5 5 5 0 8 66 555555555 0 4 55 1 4 4 1 4 4 4444444444444444444444444 5 5 66 5 5 5 5 5 5 888 5 3 1 1 5 5 5 1 66 999 1 1 66 0 5 5 5 4 4 4 66 4 4 5 0 1 1 0 2 4 8 4 4 4 4 4 66 2 1 4 3 4 5 66 3333 5 5 5 0 0 888 0 5 5 5 888 00000000000000000 9999 4 8 4 4 8 4 00 4 4 4 2 4 4 555 777 8 4 4 77 777 4 66 4 4 4 1 8 4 111 4 5 5 4 4 0 555555 4 5 4 0 66 4 1 6 999 5555 5 66 0 5 5 5 66 5 5 5 2 1 4 5 5 888 5 0 5 66 1 4 777 1 66 666 99 111111111 66 4 2 888 66 5 0
lowQualScore : .. . . ... . . ...... . ... . . . . . . . ........... ......... ... ..... ... . .. ... . . . . . ... . ............. .. . ...... . . ........ . . . . .. . . . . ... . . . . . . .. ........................ . .. ..... ...... .............. . ........ .. ... ..... ... ..... .. .... ............. . . ................................................ . .... .. . . . . ... . . . . . . . . . . . . . . . . . . . .. ... . . . . . . . . .. ......... . . .. . . . . . . ......................... . . .. . . . . . . ... . . . . . . . . .. ... . . .. . . . . . . . .. . . . . . . . . . . . . . . . .. . . . . . . .. .... . . . . . ... . . . . ... ................. .... . . . . . . .. . . . . . . ... ... . . . .. ... . .. . . . . . . ... . . . . . . ...... . . . . .. . . . ... .... . .. . . . . .. . . . . . . . . ... . . . .. . . ... . .. ... .. ......... .. . . ... .. . .
lowQualScore : 00 8 0 333 0 0 555555 8 222 0 0 0 0 4 1 1 22222222222 666666666 333 00000 000 5 55 000 0 0 0 0 7 333 6 2222222222222 55 2 000000 0 2 55555555 2 2 5 4 88 0 5 0 0 555 0 3 4 9 0 8 22 999999999999999999999999 4 22 77777 888888 66666666666666 9 33333333 88 999 44444 000 11111 99 1111 6666666666666 9 7 222222222222222222222222222222222222222222222222 3 7777 33 6 3 0 0 333 1 9 3 0 1 4 0 1 7 4 3 4 0 7 9 3 3 0 0 77 000 2 1 2 0 0 0 0 9 11 000000000 1 4 66 1 4 4 7 4 4 4444444444444444444444444 0 0 99 0 0 0 9 0 0 888 0 6 4 0 0 0 0 0 66 111 0 4 99 2 9 0 0 4 4 4 11 4 4 1 7 1 4 1 5 4 9 4 4 4 4 4 11 2 1 4 9 4 0 99 0000 0 0 0 0 2 888 0 0 0 0 888 00000000000000000 4444 4 9 4 4 9 4 66 4 4 4 9 4 4 000 333 9 4 4 11 111 4 11 4 4 0 0 0 0 000 0 6 5 0 0 1 000000 4 3 4 9 11 4 8 4 555 6666 0 99 2 0 0 0 99 0 0 0 5 4 2 0 0 888 0 4 0 99 0 4 888 7 77 222 22 777777777 11 4 5 888 99 0 5
consensus : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACCTA--TCCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTC----------C--TGTTCANTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTTCCTGTTA-TCTCANATAATTCACTTGCTTCAT-TGTGTTGTNCAGN--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCA-----CC---C---A--ATACTT-TTTCCCTT-TC--ATCT-----CGTT------TCT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CT-----GTC--T----C---------T---CC-C-AC---------------TCG----------T----------ACTC-----CA-CC----ACACACTCTC-GTTTA-CTCGCNATCTTNTCTACC-T-CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAAA-CCGGATTCCTGAAAACATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTANTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATTCACAAACTTGAANGCATCAGTCT-GG-CTTTCTAATTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATATCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC---GGT-CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATGCA-AGGTTTTGTTAT-T--TTCNT-TTCAT-A-AT-CAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACTGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--AATTG-TCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
Reference ( family-3835 ) : CACACCAAT--AGATACC-TTCACT--GA-T-CT------GACCTA--TCCCATTGATTGCTTTT-TTA-CAG-ACA-GGAAG-CAGAACTCTGACTGTCTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AA-GTCTATT--GTTTTCA-CTTTC----------C--TGTTCANTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTTCCTGTTA-TCTCANATAATTCACTTGCTTCAT-TGTGTTGTNCAGN--CTGTT-GTATTATGTACTCTATTATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCA-----CC---C---A--ATACTT-TTTCCCTT-TC--ATCT-----CGTT------TCT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CT-----GTC--T----C---------T---CC-C-AC---------------TCG----------T----------ACTC-----CA-CC----ACACACTCTC-GTTTA-CTCACNATCTTNTCTACC-T-CCCCATGACTGGACAGAAATAAGGATTTTAATTCTNTGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-AAAA-CCGGATTCCTGAAAACATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGACTCCTCTC-CTCTCATTGCTTTTATCA-TCGCTCTCCTTTTTTCTATCACTATCATTGCTACTCTT-AT-C-CCC-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GTGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTANTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGACAAAGCATTCACAAACTTGAANGCATCAGTCT-GG-CTTTCTAATTT-ACAATNTTCCAAAGTGCCGTTTTTCAT--GTTCNTGAAATGTTCAT--TTTTTNTATCCTC-TAAAATGTCTTTTGAGAGGCTGTTTTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATATCGTCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC---GGT-CTCTTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATGCA-AGGTTTTGTTAT-T--CTCNT-TTCAT-A-AT-CAG-CCAACACA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAGACNCCCACCAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CCTGGGGTCAC--CG--T-AGTNCT-CCA--T-CTCCCTGACGTCTTCGATTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGGCCCGCC-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTNACTTTCTCCATCACTGATGGGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--AATTGATCTGAAA-T--ACAA--A-TTACATG---T--TAATG-ATTTAACAAA
gi|1 : CACACCAATCAAGAT--C-TTCAT----A-T-CT------A--CTA---CGCATTGATTGCTTTTCTTA-CAG-ACA-G--AG-CAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTACAAG--TAATCTATAC---TGTTC-T-AC-AA-ATCTAT---GTTTTTA-CTTTC----------CCATGTTCTATACTTGAT----AGAT-TCCCA--------GATT-AGACTGATA-GGA-AACTTCTTGTTA--CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTG--TATTCAAAG--CCA--C---A--AGA----TTCCCCTT-TC--ATTT-----CGTT------TGT-----------A--CCTC-TG--------ATCCA--CGAG---CCA---C---CT-----ATTCAT----C---------TTTCCC-C-AC---------------TCG----------T-------------C-----CA-CA----AAAAAGCCTCTATTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-ACATAAATAAG-ATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTT-AAAAGCCGGATGCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTCT--AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTTC----TTCACT-TT-TTGAGCAATACCTGTTCCACTTGTC-TTGTGGTTTGACAGAATTAG-CCAATATAACNNNNNNNNNNNNNNNNNNNNNNNNNCACTACTCATATACAACAGCATTTGTTCAGGAAACT-GTTGGCCATAG-TGATAAGCACAGATTTCAAACA--TAGA-GT-CATGTATAAATG-TGTATTGTGCTCCACTCTGTT-TT-ATGTATGTCCCCTCCAT---TG-CTGACAAAGCATCCATAAACTTAAAACTATCAGTCT-GG-CTTTCTAATTT-ACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTGAAATTTTCAC--TGTTTTTATCCTC-TAAAATATCTTTTGAGAGGCTGTTGTCATTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTGTT-TGCATTTCGTCAATTTCAGCAATGATACGTTGGAC-ATGATTCAGGAAAAACTTGTAACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAT-ACA-ATTTACTGAG-AAGGGGA-AACATGCGAGATGTTA--ATTTCAGCAATGCAGGTGACATTATATCTTCATTT-AAACCATACTTCTGGAGAATCTGTCTTTTGTCATTATCATTTAATTCGTG-ATCAGAA-C--TGTTTAACCTAATCATACAAGTCCTCTTCTTTTGGTAA-GTGAATGG-TTGT---AAG-GTAA-G-TTGAGTC----------------CTCATT----GA-ACAC-AGC-CT-TCTTAATTGTCAAT-CAAG-AGTTCT-AGACT-T-A-CCATGCA-AGGTTTGGTTAT-TA-TTCTG-TTCATAA-AT-CAG-CCAATACA--TCTAAT-TTTGTTT--TCT-GGAG-GCACAAGGACCCCCCACACAA-TCA---TC-AT-ACAAAAAACCTGTGG-ATT-CTTTTTGTCAC--GG--T-AATGCT-TTA--T-CGCTCGGATTTCATCGACTGG----TACAA-TCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCTGTGGCAGACTTCCCGGACCCAGGCCCACC-AAC-AAACG---TTAC-ACAAGGTTG-GT--TTCTTACTTTCTCCATCATCGATGGGAAGCTGTG-GGTTTCACAGTAACGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCCATATTATG--AATC--TCTG---------AA--A-TTACATA---T--TAATGAATTTA
gi|10 : ATACAC-AAAACAAGTG-TTGC-CTAATTACCAGTT-T-TTATGCATT-TGCATTTCGTCAA-TCTATGAATGATAGATTG-AC-TGGATTCAGGAAAAACTTGTAACCAAGAGATTGAAAATTGTGTTCTCCTTCGAAAGACAGATTTACAGAGGAAGGGGACAACATGCGGAGTGGTGTTATTTCAGCAATGCAGGTGACAATAGATCTTCATTT-AAACCATACT-CTGGAGGAACTTGTTTTTGTCATCATTAGTTAAT-CATT-ATCAGAAGC--TGTGTAACTTAATCAG---CTT-CTCTTC-TTTGGTAA-G-GAATGGTTTGTTGTAACCGT-AAG-T----T-----------------CTCCTTCTTGAA-ACACCAGC-CTTCTCTACATGTC-AT-CAA--AGTTCTTAGACAATAA-CCATGGC-ACGTTTTGTTAT-T---TCGT---CAT-T-ATTCAGTCCAATACAGTCCTAAT-TTTGTTT--TCTTGGAG-TC-CAAAGACTCCCACCACCA-TCA---TCAATGAACAAAAACCTG--G-ATT-CCTGGGGTCGC--CA--T-AGT-CT-CCA--TTCTTCCTGAC--CTTT--TTGG----TACAA-TCT--C-TAA---T-TC-CTCCTGG--AAGCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTCCCGGACCCAGACCCACCAAACAAAACG---TCACAAAAAGGCTGCGT--CTCTAACTGTCTGCAtgatccagataaatagcaataatggtgctttattctataat
gi|11 : tTCTC--TCTCATTGTTTTTATCA-TCACTCTCCTTTTTTCTACCACTATCTTTGCTACTCTT-AC-CTCCC-TCACTAGATTGAGAA--TCACTAGAAGCACTCTGTTTCTCTTTCTCT-TT-GTAAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTATTGTGCACCACTCTGTT-TT-GTGTATGTCCCCTTCAT---TG-CTGACAAGGCATTCACAAACTTGAATGCATCTGTCT-GA-CTTTCTAATTC-ACAATATTTCAAAGTTTTATTTTTCAT--GTTTTTAAAATTTTCAT--TATATTGATCCTC-TAAAATGTTTTCTGAAAGCCTATTTTCATTT-AGCATACAC-ATAACAAGTG-TTAC-ATAATT--AAGTT-TGTTATGTCTT-TGCACATTATCAAGT
gi|12 : CACACCAAT--CAATATC-TTCACT--GA-T-CT------GACCTA--GCGCATTGATTGCTTTC-TTA-CAG-ACA-GGAAG-CAGCACTCTGACTGTCTGTACA-----------TCACC---------ACTG--TAACAAC-----TCAA---TACAAG--TAATCTATAC---TGTTC-T-AC-AA-GTCTATT--GTTTTTA-CTTTC----------C--TGTTCATTACTTG-T----AGATATCCCA--------GATTTAGACTGATATGGAGAACTTCTTGTTA-TCTCATACAATTCACTTGTTTGAT-TGTGTTGTGCAGA--CTGTT-GTATTATATACTCTATTATCT-GATAATGTCCATAGCA-AATCACCCAGCTGATCACTCTCACATTGTACGTG--TATTCAAG---CCA--C---A--ATATTT-CCCCCTTT-TC--ATTT-----CGTT------TGT-----------A--CCTC-TG--------ATCCA--CCAG---C-A---C---CTTCTCAATC--T----T---------TC--CC-C-AC---------------TC-----------------------CTC-----CA-CA----AAAAGCTCTC-TTTTC-CTTGCTATCTTATATACC-G-CCTCATGACTGGACAAAAATAAGGATTTTAAT
gi|13 : CTGATCACTCTCACATTGTACGT------CCA-----TC---C---A--ATCCAT-AGTCCCTTATC--ATCT-----CGTT------TCC-----------A--CCTC-TG--------ATGCA--CCAG---C-ACCTC---CT-----GTT--T----C---------C---CC-C-AT---------------TCATCCCTCTCCCT----------ACTCTCCT-TATCC----ACACACTCTC-GTTTA-CTCACTATCTTTTCTACC-T-CCCCATGACTGGACAGAAATAAGG
gi|13 : TTTTTCTTTCACTATCATTGTTACTCTT-ATCC-CCC-TTACTAGATTGAGAA--Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttttctttcactatcattgttactcttatcccccttactagattgagaat
gi|14 : ctgatcactctcacattgtacgtccatccaatccatagtcccttatcatctcgtttccacctctgatgcaccagcacctcctgtttcccccattcatccctctccctactctccttatccacacactctcgtttactcactatcttttctacctccccatgactggacagaaataaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaAC-----TCAA---TACAAG--TAATCTACAC---TGTTC-T-AC-AT-CCCTATT--GTATTTA-CTTTC----------C--TGTTCATTACATG-T----AGATATCCCA--------GATTTAGACTGATGTGGTGAATTTCCTGTGA-TCTCACATAATTCACTTGTTTGAT-TGTGTTGTGCAGT--CTGTT-GTATTATGTACTCTATTATCT-GATGATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTACGTGTCTATTTG----------------------T-TCTCCCTTATC--ATCT-----TGTG------TCC-----------A--CCTC-TG--------ATCCA--CCAG---C-GCCTC---CT-----GTC--T----G---------T---CC-A-AC---------------TCACCC-------C----------ACTC-----CT-CCCTCTCCACACTCTC-CTTCATCACACACTCTCGTTTAC
gi|15 : CATTGATGGGAAGCTGTG-GGTTTCATAGTAAATCTTGTCTTCCTCTCTCCATTTCTGAAT---GTTCATAT--TGTAAATT--TCTGAAA-TC-ACAA--G-TTA-ATG---TACTAATC-AT
gi|16 : cctggcgttagaagagtgctgtacagttttctctctccaaaaacatttccagccgATACCAAT--CAATACCCTTCACTCGAA-TACT------AACCTAAATTCCATTGATTGCTCTTCTTA-CAGTACAAGGAAGACATA-CTCT-ACGGTCTGCACA-----------TCTCC---------ACTA--TAACCAC-----TCAA---TACAAAGTTAATCTACACTAGTGCTC-TGAC-AATCCCTATTTGGTTTACA-Cagttcatttcataagacactagatctgtcaaagtgaaccgaat
gi|17 : aCATT----GA-ACAC-AAT-CT-CTCTACATGTC-AT-CAG--TGTTCT-AGACC-TTT-TCATGCATCGATTTT-TTATAT--TTCGT-TT-AT-G-AT-CTG-CCAACATG--TCTAAT-TTCGTTT--TCT-GCAG-AC-CAAGGACACCCACCAC-A-TCG---TCAAT-GACAAAAACCTGTGG-ATT-
gi|18 : TGAGAAGCTGTG-GGTTTCATAGTAAAGCTTGTCGTCCTCTCTCCATTTCTGAATGTAGTCAATAT--CG--TATTGATCTA---------AA--A-TTACATA---T--TAACG-AATTAACAAA
gi|19 : TGTCCATAATA-AATCACCCAGCTGATCACCCTCACATTccagttaaataccaataataatactatattctataacata
gi|2 : gCACACCAAC--AGATACC-TTCACT--GAAT-CT------GATGTA--TCCCATCGATTGCTCTT-TTAACAG-AAA-GGAAA-CATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CA-GAG--TAAT-TACAC---TGCTCCT-ATTGA-GACTATT--GCTTTCAACTTAC----------C--TGGTCAGTACATG-T----ATATATTCCA--------GATTTAGACTGATGTGGAGAATTCCCTCCAAATCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGCACCTGTT-GTATTATGTATTCCATTATCT-GAGAATGTCCG-AGTA-AATCACCCAGCTGATCA-TCTCACATTGTAAGTG--CATTTC-----CT---T---A--ATACTTGTTTCCCTT-TC--ATCT-----TCTT------TCT-----------AATCCTC-TG--------TTCCAG-TTAG---C-A---T---CT-----GTA--T----C---------T---CC-C-GC---------------TCA----------T----------ACTC-----CA-CC----ACACACTTTA-CTTTA-CTCACAATCTTATCTACCCT-CTCCATGACTGGACAGAAACAAGGATTTTAATTCTATGT-ATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTT-TAAA-CCGGATTGCTGAAAACATCAT-ACAGTTCCATGTTCTGTATGTCTCTATACAATCCTCTCTTCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA--GACTCC-CTCTCTCTCATTG-TTTTATCAATCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTTTAT-C-CCCCTTACTAGATTGAGAA--TCGCT---------CTGTTTCTCTTTCTCT-TTTGTGAGCAATACTTG-TTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATGCAACT-------------------------CCTACTCAT-TATAACAACATTTGGTCAGGGAACT-GTTTACCATAAATGATTAGCACATATTTCATACA--GAAA-GT-CATGTATAAATG-TGTAATGTGCACCA-TCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGATAAAGC-TTTACAAA--TGAATGCATCAGTTT-GAATTTTCTAATTTGACAATTTTCCAAAGAGCCGCTTTTCATTTATTCAT-AACCGTTCAT--TTTTT-TATCTTC--AAAATGTCTTTTGAAAGGCAGTTTTCGTTT-AGCCAACAC-AAA-CAAGTG-TTGC-ATAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATA-ATTCGAC-TGGATTCAGGAAAAACTTGTCACCAATAGCTTGGAA-TTTGTTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTACATTT-AAACCATACTTCTGGAGAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC---GGC-CTCTTC-TTTGGTAACG-GAATGACTTGT---AAGTGC-A-G-T---GT-----------------CTCATT----GA-ACACAAGC-CT-CTCTACATGTC-AT-CAA--AGTTTT-CGACT-TAA-CCATCCA-AGGTTGTGTTAT-T--CTCAT-TTCAT-ATAC-TAA-TTAACACA--TTTAAT-TCTGTTTTATCT-GGAG-GC-CAAAGACTCCCAAAAC-A-TCA---TCAAT-A--AAAAACCTGGTG-GTT--CTGGGGTAAT--CA--T-AGTCCT-CCA--T-C-CCCTGACATCTTGGGTTGGC---CACAA-CCT--CATAT-CCT-TCGCTCCTGG--A-GCTTGAGGGCA-AT-GTGGTGTGCCATGGCAGA-TTCCCGGACCCTGGCACGCC-AAC-GAATG---TTAC-ACAAGTTTG-GTGGTTCTCACTTTTTCCATCACTGATGGGAAGCTGTGTGTTTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAAT---GGCAATAT--CA--GATTGCTCTGAAA-T--ACAA--ACTTACATG---T--TAATG-ATTTAACAAcctcttgacatccactagcaacctctgtctatccctctcctcactccactcatcccagtcctcactctc
gi|21 : CC-TTGCTACATTGAGAA--TCACT-----------GTTTCTCTTTCACT-TT-GGGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACAGAATTAG-C-AATATAACT-------------------------ACTACACATATAccaaatgaatatagaatattgatgggtttttgtttctataatgtagttgt
gi|22 : ACTCTCACATTGTACGTG--TATTCA-----CCATTC---A--A----T-TTTCCCTTATC--ATCT-----CGTT------TAT-----------C--CCTC-TG--------ATCCA--CCAG---C-ACCTC---CT-----CCC--T----C---------T---CC-CAAC---------------TC
gi|23 : GCTGATCACTCTCACATTGTACGTG--TGT-----------------A--TTAC-T-TTTCCCTT-----ATCT-----ACTT------TCG-----------C--CCTC-TG--------ATCCA--CCAG---C-A---CCCACT-----GTC--T----C---------C---TC-C-AC---------------TC----------------------ACCC-----CG-Ctccttct
gi|24 : CTC-TG--------ATCCA--CCAGTGTC-T---C---CT-----GTC--T----CACCGACTCAC---CC-C-AC---------------TCA----------TCTCTCTCCTCACTCTCTTCCT-CC----ACGCTCTCTC-GTTTA-CTGACTATCTTTTCTAtcc
gi|25 : -CTTTC----------C--TGTTCATTACATG-T-------------A--------GAT-----------------ATT-CCTGTTA-TCTCATACAATTCACGTGTTTCAT-TGTGTTGTTCAGT--CTGTT--CATTATGT
gi|26 : GTG--TGTTCA-----TC---CTTTA--AT-CTT-TCTCCCTTATC--ATCT-----CGTT------TCT-----------C--TCTC-TG--------ATCCA--CCAG---C-ATCTC---CT-----GTC--T----C---------C---TC-C-
gi|28 : CACACCAAT--AGATACC-TTTACT--GA-C-CT------GACGTA--TCCCATTGATTGCTTAT-TCA-CAG-ACA-GG
gi|3 : tCACCACT--CGATACC-TATACT--GA-T-CT------GACCAA--TCCCATTGATTGCTTTT-TGA-CAG-ACA-GGACG-CAGAACAACGACTGTCTGTACA-----------TCACC---------ACTA--AAGCAAC-----TCAA---CAGAAG--TAATCTACAC---TGCTC-T-GT-AC-GTCTACT--GTTTTCA-CTTTC----------T--TGCTTGTTACACG-T----ATATATCCCA--------GATTTAGATTGATGTGAATAATTTCCTGTTA-TCTCAAATAATTCACTTGTTTCAT-TGTGTTGTTCCAT--CTGTT-GCACGATGTACTTTAACATCT-GATAATGTCCGTAGTA-AATCACCCAGCTGATAACTCTCATATTGTA--------TTCC-----CG---C---C--ATAATA-TTTC------------T-----CGTT------TCT-----------C--CCTC-TC--------ATCTA--GCAG---C-A---C---TTTTT--GTC--TTCCCC---------T---CT-C-ACCCCGCACCCTCTTCTTCC----------T----------ACTCTCCTTCT-CC----ACACACTCTT-GTTTA-CTCACTATCTTATCTATC-T-CTCCCCGACTGGACAGAAATAAGGATTTCAATTCTGTGT-ATGACTT-TTTCTCTAACACGTCAACAAAAGCCTGACACACACAGGAATGTTTT-AAGA-CCTGATTCCTGAAAACATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTACACTC-TCTCTGCTAGTAGTGGGTACTGATCCTCACATAACCTTATACACAGATCAAA----TCCTCTC--TCTCATTGTTTTTATCA-TCATTCTCCTTTTTTCTATCACTGTCATTGCTACTCTT-AT-CACCT-TTACTAGATTGAGAA--TCACT---------CTGTTTCTCTTTCACT-TT-GGGAGCAATACCTGGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATATAACT-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCAAATATTTCAAACA--TGGA-GT-CATGTATAAATG-TGTATTGTGCACCACTCTTTT-TTTGTGTATGTCCCCTCCAT---TG-CTGACAAAGCATCCAAAAATTTAAAAGTATCAGTGC-AG-TATTCTAATCT-GCAATTTTCCAAAGTGTCAATTTTCAT--TTTCATGAAATATTCAT--TTTGAATATCCTT-TAAAACACTTTTTGAGAGGCCATTTTCACTT-AGCATACAC-AAAACAAGTG-TTGT-GTAATT--CAGTT-TGTTATGTCTT-TGCACATTATCAAGTTCATCAATAATACATTGAAC-TGGGTTCAGAAAAAACTTGGAGCCAAGAGTTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-GTTTACAGAG-AAGGGGA-AACATGCAAGATGTTG--ATGTCAGCAATGCAGGTGACATTATATCTTCATTT-AAACCATATTTCTGGAGAATTTGTCTTTTGTCATTGTCATTTAATGTATT-ATCAGAA-C--TGTGTAACTTAATCAC---AGT-CTCCTC-TTTGGTAA-A-GAATGGATTAT---AAG-GC-T-G-T---GT-----------------CTCATT----AA-ACAC-AGT-CT-CTCTACATGTC-AT-CAA--AGTTCT-AGACT-TAA-CCATACA-AGGTTTCGTTAT-T--CTCTG-TTCAT-A-AT-CAG-TCAATGCA--TCTAAT-TTTGTTT--TCT-GGAG-GC-CAAAAACTCCTACAAC-A-TCA---TCAAT-AACAAAAACCTGCGG-ATT-CTTTGTGTCAC--AG--T-ATTGCT-TTA--T-TTCTCGGATTTCATCAACTGG----TACAA-CCT--CGTAA-CCT-TC-CTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCATGGCGGACTTCCAGGACCCAGACCCACC-AAC-AAACA---TTAC-GCAAGGTTG-GT--TTCTAACTTTCTGAATCACTGACGTGAAACTGTG-TGTTTCATAGTAAAGCTTGTCTTCCCCTTTCCATTTTTTAAT---GTCCATATTGTG--AATT--TCTG---------AA--A-TCACATG---T--TAATG----TAATAA
gi|4 : tgACACCAATCAAGAT--C-TTCAT----A-T-CT------A--CTA---CGCATTGATTGCTTTTCTTA-CAG-ACA-G--AG-CAGCACTCTGACT--CTGTACAGATTTTTATTTTTTCCCAAAAAAAAACTTGTTAACAATAATTTTCAAAATTACAAG--TAATCTATAC---TGTTC-T-AC-AA-ATCTAT---GTTTTTA-CTTTC----------CCATGTTCTATACTTGAT----AGAT-TCCCA--------GATT-AGACTGATA-GGA-AACTTCTTGTTA--CTTATACAATTAACTTGCTTGATGTGTGTTGTGCAGA--CTGTTTGTATTATA-ACTCTAT-ATCTTAATAATGTCCATAGCACAATCATCCCACTGATCACTCTCACATTGTACGTG--TATTCAAAG--CCA--C---A--AGA----TTCCCCTT-TC--ATTT-----CGTT------TGT-----------A--CCTC-TG--------ATCCA--CGAG---CCA---C---CT-----ATTCAT----C---------TTTCCC-C-AC---------------TCG----------T-------------C-----CA-CA----AAAAAGCCTCTATTTC-CT-GCTATCTTTAATACC-CGCCTCATGACTG-ACATAAATAAG-ATTTTAATT-TCTGGTATGACTTCTGTCTCTAAAACACCA-TAAAAGCCTGACACACCTGGG-ATGTTTT-AAAAGCCGGATGCTGAAAAACAT-ATCACAGCTCC---TTCTGTATGTCGCTGTACAATC-TCTCT-CTAACAGTGG-TA-TGATCTTCATGTAACC--AT-CACAGATCAAACGACCCCTTAC-C---CATTGCTTT-A-CA-TCGCTCTCCTTTTTTCCATCACTATCATTGCTACTC-T-AT-C-CCC-CTACGAGATTGAGAA--TCACT---------CTGTT----CTTCACT-TT-TTGAGCAATACCTGTTCCACTTGTCTT-GTGGTTTGACAGAATTAGCC-AATATAACC-------------------------ACTACTC--ATACAAC-ACATTTGTTCAGGAAACTAGTTAGCCATAG-TGATAAGCACAGATTTCAAACATTTAGACGTCCAGTTATAAATGTTGTA-TGTGCTCCACTCTGTTATT-ATGTATGT-CCCTCCATAACTGCCTGACAAA--ATCCATAAACTTAAAACTATCA-TCTGGG-CTTTCT-ATTT-ACAATATTTCAAAGTGCTTTTTTTCAT--GTTTTTGAAATGTTCACTGTTTTTTTATCCTCATAACATATC-TTTGAGA-GCTGTTGTCATTTAAGCATACACAAAAACAAGTGTTTGCAATAATT--CAGTTCTGGTATGTGTTATGCAT-TCGTCAATTTCAGCAATGA-ACGTTGGACATTGATTCAGGAAAAACTT-TAACCAAGAGCTTGGAATTTTTGTT-TTCTTTGAAT-AAA-ATTTACTG----AAGGGA-AACATGCGAGATGTTA--A-TTCAGCAATGCAGG-GACA-TATATCTTCATTTAAAACCATACTT-TGAGGAATCTG-TCTTTGTCATTTATATTTAATTTGTGTATCAGAA-CGTTGT-TAACCTAATCAC---AGT-CTCTCT-TTTGGTAA-GTGAATGG-TTGT---AAG-GT-A-GTT---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTTAATGTCAAT-CAATGTGTTCT-AGACT-TAACCCAT-CA-AG--TTGGTTAT-CTATTCTG-TTCATAA-AT-CAG-CCAATAC---TCTAAT-TTTGTTT--TCT-GGAG-G--CAAAGACCCCCACCAG-A-TCA---TCAAT-ACAAAAAACCTGTGG-ATT-CTTTTTGTCACAGGG--TAAATGCT---G--T-ATCGCTG--GATTTC-ATCGGACTCTACAA-TCTTGCGTAA-CCTATC-CT-CTGGTCA-GC-TGA-GGCGAAT-GT-GTGA--CGT-GCAGACTTCCC-GACCCAGGCCC-CC-AAC-AAACGCCCTTAC-ACA-------GT--TT-TTACTTTCTCCATCATCGATAGG-AGCTG-G-GGTTTCACAGTAACGCTTGTCTT-CTCTCTCCATTTCTGAAT---GTCCATATA-TG--AATC--TCTGAAATT--AC-A--A-TTA-ATGGAAT--TTATG-ATtcatggttcatttcataatacattagatttaccaaagtgtgaattaaaaatat
gi|5 : CACACCAAC--AGATACC-TTCACT--GA-T-CT------GATGTA--TCCCATTGATTGCTCTT-TTA-CAG-AAA-GGAAA-CATAACTCTGACTGTTTGTACA-----------TCTCC---------ACTA--TAACAAC-----TCAA---CAGAAG--TAATCTACAC---TGCTC-T-AT-GA-GACTATT--GCTTTCA-CTAAC----------C--TGGTCAGTACATG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTCCCTCCAA-TCTCAAATAATTCACTTACTTCAT-TGTGTTGTTCAGC--CTGTT-GTATTATGTATTCCATTATCT-GAGAATGTCCGTAGTA-AATCACCCAGCTGATCACTCTCACATTGTAAGTG--CATTTC-----CT---T---A--ATACTTGTTTCCCTT-TC--ATCT-----TCTT------TCT-----------AATCCTC-TG--------TTCCA--GTAG---C-A---T---CT-----GTA--T----C---------T---CC-C-GC---------------TCA----------T----------ACTC-----CA-CC----ACACACTTTA-CTTTA-CTCACAATCTTATCTACC-T-CTCCATGACTGGACAGAA-CAAGGATTTTAATTCTATGTTATGACTT-TGTCTCTAACACACCAATAAAAGCCTGACACACCTGGGGATGTTTTTAAAA-CCGGATTGCTGAAAACATCAT-ACAGTTCCATGTTCTGAATGTCTCTATACAATC-TCTCTGCTAACAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAA-CGACTCCTCTC-CTCTCATTGTTTTTATCA-TCACTCCCCTTTTTTCTGTCACTAGCATTGCCACTCTT-AT-C-CCC-TTACTAGAT-GAGGAATTCGCTT--------CTGTTTCTCTTTCTCT-TT-GTGAGCAATACCTTGTTCACTTGTC-T-GTGGTTTGACATAATTAG-C-AATGCAACT-------------------------ACTACTCATATATAACAACATTTGGTCAGGGAACT-GTTTACCATAA-TGATTAGCACATATTTCATACA--GAAA-GT-CATGTATAAATG-TGTAATGTGCACCACTCTGTT-TT-GTGTATGTCCCCTCCAT---TG-CTGATAAAGCTTTTACAAACTTGAATGCATCAGTTT-GA-ATTTCTATTTG-ACAATTTTCCAAAGAGCCGCTTTTCAT--ATTCATGAAATGTTCAT--TTTTTCTATCCTT-CAAAATGTCTTTTGAAAGGCAGTTTTCGTTT-AGCATACAC-AAAACAAGTG-TTGC-ATAATT--CAGCT-TGTTATGCCTT-TGCATATCACTAAGTTCATGAATGATACATTCGAC-TGGATTCAGGAAAAACTTGTCACCAAGAGCTTGGAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGAGGA-AACATGCGAGATGTTG--ATTTCAGCAATGCAGGTGACATCAGATCTACATTT-AAACCATACTTCTGGAGAATATGTTTTTTGTCATTGTCATCTAATGCATG-ATCAGAA-C--TGTGCAACTTAATCAC---GGC-CTCTTC-TTTGGTAA-G-GAATGACTTGT---AAG-GC-A-G-T---GT-----------------CTCATT----GA-ACAC-AGC-CT-CTCTACATGTC-AT-CAA--AGTTTT-CGACT-TAA-CCATCCA-AGGTTGTGTTAT-T--CTCAT-TTCAT-A-AC-TAA-TTAACACA--TTTAAT-TCTGTTT--TCT-GGAG-GC-CAAAGACTCCCAAAAC-A-TCA---TCAAT-AACAAAAACCTGTGG-TTT-CCTGGGGTAAT--CA--T-AGTCCT-CCA--T-CTCCCTGACATCTTTGGTTGG----CACAA-CCT--CATAT-CCT-TC-CTCCTGG--A-GCTTGAGGGCA-AT-GTGGTGTGCCATGGCAGATTTCCCGGACCCTGGCACGCC-AAC-GAATG---TTAC-ACAAGTTTG-GT--TTCTCACTTTTTCCATCACTGATGGGAAGCTGTG-TGTTTCAGAGTAAAGCTCGTCTTCCTCTATCCATTTCTGAAT---GGCAATAT--CA--GATTGCTCTGAAA-TA-ACAAACA-TTACATG---T--TAATG-ATTTAACAAAccagaatacaataccataatgtgcttattctatatgacatatatgatag
gi|6 : ATCGAT--GAATATT-TTCACT--GA-T-TG------AATCTA--TCCCATTGATTGCTTCC-TTA-CAG-ATA-GGAAG-CAGAACGCGGACTGTCTGTACA-----------TCACC---------ACTA--TAACAAC-----CCAA---TCC--------------C---T-TTC-T-AC-AA-GCATATT--GTTTTCA-CTTTCATTGGAAGCTT--TATTCAATATATT-CCACAATATATTCCATAATCAATGATGTAGATGGATGTTGATGATCTTCGGCTA-TCTTAAATAATTATCTGAGTTCTT-TGTGTTCTTTAAT--GTGTT-GTATTATACAATCTATTATTT-GATAATGCCCATAGTA-AATAATCCAGCTGATTACTCTCACATTGTATGTA--AATTTATATCCCT---C---ATCAT-CTTGTTTGGGTC-TCCGATCCAAAAGCGAT------CCT-----------G--TCTC-TCCC------ATTCA--TCAAA--C-T---C---CC-----TTC--T----C---------T---CC-CTAT---------------TC-----------T----------CCTC-----CA-CC----ACATGCATTC-GTTTA-ATTAAAATATTATCCGCC-T-CTTTAAGACTGGAGAGAAATAAGGATTTTAATTCTATGTC-TGGCTT-TGTCTCTAACACACCAATAAAGGTCTGACACACCAGGGTATGTTTT-AAAC-CCTGATTCCTGAAAGCATCAT-ACAGCTCCATGTTCTGTATGTCTCTGTAGAATC-TCTCTGCTAGCAGTGGGTACTGATCCTCGCGTAACCTTATACACAGATCAAACGATTCCTCTC--TGTCATTGCTTTTTTCA-TTGCTCTCATTTTTTCTATCACTATCATTGTTACTCCT-AT-T-CCTGTTACTAGATTGAGGA--TCACT---------CTGTTTTTCTTTCA--------------TACCTGGTTCATTTGTC-T-GTGGTTTGAAAGAATTAG-C-AATATAA-T-------------------------ACTACTCATATACAACAACATTTGGTCAGGAAACT-GTTTGCCATAG-TGATAAGCACATATTTCAAACA--CGGA-GT-CAT----AATTG-TGTAATGTGCACCATTCTGTT-TT-GTGTATGCCCCCTTCAT---TG-CTGACAAAGCTTTTACTAACTTGTATGCATCGGTCT-GG-CTTTCTAATTT-ACAATTTTCCAAAGTGTCAATTTTCAT--ATTCATGAAATGTTCAT--ATTTCCTATCCTT-TAAAATATCTTTTGAGAGGCTGTTTTCATTT-ACCATACAC-AAAACAAGTG-TTGT-ATAATT--CGGTT-CGTTATGTCTT-TGCATATCATCAAGTTCACTAAT-----ATTGGAA-TGGATTAAAAAAAAA-TTG-AACCAAGAGTTTGAAA-TTTCTTT-TCCTTTGAAA-ATA-ATTTACAGAG-AAGAGGA-AACATGCGCGATGTTG--AAGTCAGCAGTGCAGGTGACATTAGATCTACATTT-AAACCATCCTTCTGGAGAATCTGTTTTTTGTAGTTATCATCTAATGCATA-ATCAAAT-T--TGTGTAGCTTAATTAA---TGT-GTCGTC-TTTGGTAA-G-GAATGGTTTGT---AAG-GT-A-G-T---AC-----------------CTCATT----GA-ACAC-CGT-CT-CTCTACATGTC-AT-CAA--AGATTT-AGAGT-TAT-CCATGCA-GGGCTTTGCTAT-T--TTCCA-TTGAT-A-AT-CAG-TCAACACA--ACTAAT-TTTGTTT--CCT-GGAG-AC-CAAAGACACCCTCACC-A-TCA---TCAAT-GATAAAAACCTGTGG-ACT-TTTAGGATCAC--TA--T-AGTTCT-CAA--T-CTTTCTGATATCTTTGATCGG----CACCA-CCT--CGTAA-CCT-TC-GTCCTGG--A-GCTTGAGGGCG-AT-GTGGTGAGCCGTGGCAGACTTTCCAGACCCAGGCACGCT-AAC-AAACG---TTAC-GCAAGGTTG-GT--TTCTTACTTTCTCCATCACTGACGGGAAGCAGTG-GGTTTCATAGTAAAACTTGTCTTCCTCTTTCCATTTCTTAAT---GTCACTAT--CG--AATTGATCTGAAA-CGAACAA--A-
gi|7 : CTCTCTCATTGTT-TTCATCACTTTCTGGTTCACTTGTC-T-GTGGTTTGACATAGTTAG-T-AATATAACT-------------------------ACTACTCATATACAACAACATTTGTTCAGGAAATT-GTTTGCCATAG-TGATAAGCACAGATTTCAAACA--TGGA-GT-CATGCATAAATT-TGTATTGTGCACCACTCTGTT-TT-GTGTATGTCACCTCCAT---TG-CTGATAAAGCATTCATAAAATTAAACCTATCAGTCT-GA-TTTTGTAATTT-ACAACATTTCAAAGTGCTCTTTTTCAT--TTTTTGGAAAATTTCAT--TGTTTGGATCCTC-TAAAATGTTTTCTGAGAGGCTGTTTTCATTT-AGCATACAC-AGAACAAGTG-TTGC-ATAATT--CAGTT-TGTTATGTCTT-TGCATTTCATCAAGTTCATCAATGATACATTGGAC-TGGATTCAGGAAAAACTTGTAATCAAGAGCTTTGAA-TTTTGTT-TTCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGTGAGATGTTG--ATGTCAGCGATTCAGGTGACAATATATGTTCATCC-AAACCATACTTCTGGAGAATTTGTTTTTTGTCTTTGTCATCTAATGCATG-ATCAGAA-C--TGTGTAACTTAATCAC---ATT-CTCTTC-TTTGGTAA-G-GAATGATTTGT---ATG-GT-A-G-T---GTCAGTCCACTAATACAACCTCATT----GATACAT-ACCTCT-CTCTACATGTC-ACACAA--GTTTCT-AGACT-TAG-CCATGCA-AGGCTGTGTTAT-T--TTCTTGTCCAT-A-AT-CAA--TAACACT--TTTAATCTCTGTTT--CCT-GGAGCAC-CAAAGACAACCACCAC-A-TCAATGCAAAT-AACAAAAA-CTGCGA-ATTCCCTGGGGTCAC--CGACT-AATACTACCAATT-CTTCCTGACGaacagatgaatattaatggagtttat
gi|8 : CACACCAAT--AAATACC-TCTACT--GA-C-CTTTAGGTGACCAA--CCCAATCTATTGCTCTC-TTA-CAG-ACA-GGAAT-CATAACTCTGACTGTCTGTACA-----------TCTCC---------ACTG--TAACAAC-----TCAA---TAGAAG--TAATCTACAC---TGTTC-T-AC-AA-GTATATT--GTTTTC-------------------------------TG-T----ATATATCCCA--------GATTTAGACTGATGTGGAGAATTCCCTGTTA-TCTCAAATACTTCAATTGTTTCGT-TGTGACGTGCAGT--CTGTT-GTATTACGTATTCTATAATCT-GATAATGTCCATAGCA-TATCACCCAGCTGATCACTCTCACATTGTAAGTG--TATTCA-----TC---T---A--ATA-TT-TCTCCCTTGTC--ATTT-----TGTTTCTTCCTCTGATCCACCAGCA--CCTCCTGTCTCCTCCATTCATCCCA----C-T---C---CT-----TCC--T----C---------T---CCTC-AC---------------TC-----------T----------CCTC-----CA-CC----AAACATTTTC-GTTTA-CTCACAACCTTTTCTACC-T-CTCCATGACTGGACAGAAATAAAAATGTTAATTCTTTGT-ATGACTT-CATTTTTAACACACCAATAAAAGCCCGACACACCTGGGGATGTTTT-AAAA-CCAGATTCCTGAAAACATCAT-ACAGCTCCATGTTCCGTATGTCTCTGTACAATC-TCTCCGCTAACAGTGGGTACTGATCCTCATGTAGCCTTATACACAGATCAAACGATTCCTCT--CTCTCATTGTTTTCATCA-c
gi|9 : ATTGGAC-TGGATTCAGGAAAAACTTGTTTCCTAGAGCTTGAAA-TTTTGTT-TCCTTTGAAA-ACA-ATTTACAGAG-AAGGGGA-AACATGCGATGTGTTG--ATTTCAGCAATGCAGGTGACATTAGATCTTCATTT-AAACCATACTTCTGGAGAATCTGTTTTTTGTCATTATTATCTAATTTATG-ATCActttctg
gi|9 : agC-CAAAGAATCCCACCAC-AATCAA--TCAAT-A-CAAAAATCTGCGGGATT-CCTGGGGTCAC--C-----AGTCCT-CTA--T-CTTCC-GACGTTCTTG-TTGG----TACAAACCT--CGTAAGCCT-TC-C-CCTGG--A--TTTGAGGGCG-ATTGTGGTGA------------TTCCCGGACCCAGACCCACC-AAC-AAAGG---TTAT-GCATGGTTG-GT--TTCTGACCTTCGCCATCACTGAATGGAAACTGTG-GGTTTCATAGTAAAGCTTGTCTTCCTCTCTCCATTTCTGAAT---GTCAATAT--CG--TATCGATCTG---------AA--A-TTACATA---T--CGACG-AATTAACGAAannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccaaagaatcccaccacaatcaatcaatacaaaaatctgcgggattcctggggtcaccagtcctctatcttccgacgttcttgttggtacaaacctcgtaagccttcccctggatttgagggcgattgtggtgattcccggacccagacccaccaacaaaggttatgcatggttggtttctgaccttcgccatcactgaatggaaactgtgggtttcatagtaaagcttgtcttcctctctccatttctgaatgtcaatatcgtatcgatctgaaattacatatcgacgaattaacgaacctgatgaatacc
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATGTCCATATTGTATATTTCTGAAATCACATGTTAATGTATTTTTTAAAATCATGGTTCATTTCATAAAACACTAATACTATATGTGCCAAAGTAAACAGAATA
Unaligned ( gi|27 ): TTCGTCTCTAGCAGGGTCTGCAGACACACCAGGGTCTTTTTAGCTGGTTCCTGTAGAGCATCCAGTAATACAG
Unaligned ( gi|29 ): ATGAATATAGAATATTGATGGGTTTTGTTTCTACAA