lowQualScore : 111111 111111 11111 111 11 2222222222222 111 111 111 1 111 111111 1 111 33333 11 3333 1 2 11 1 1 111 3333333 11111111 1 11111 11 11 2222222 111111111 5555555555555 111 9999999999999999999999999999999999999999 1 1111 22 1111111 1 1111 1 1111 3333333333 1 11111 1 1 111 11 1 1
lowQualScore : 44 3 22 3 1 1 3 1 3 3 5 444 3 222222 8 4 111111 55 8888 8 777 4 55 00000 55 3 9 444 3 3 3 1 3 00 4 4 4 66 4 1 4444444444444 2 4 4 4 66 4 2 444 000 5 5 5 888 66 66 5 5 555 3 5 8 5 88 888 0 5 888 0 66 5 3 5 77 666 3 111111 1 555 66666 5 5 22 5 0000 5 5 1 5 1 4 8 44 5 5 0 55 4 4 55 666 4 3333333 8 4 99999999 4 0 4 00000 4 11 3 666 66 0000000 3 3 3 3 3 3 3 3 3 2 3 5 3 6 333333333 8888888888888 3 3 3 111 44 9999999999999999999999999999999999999999 6666 2 2 2 2 6666 2 5 2 6666 999 6 3 4 3 3 99 8888888 2 3333 3 555 0 55 1 1 99 1 4 4 4 4 4 99 3 3 44 6 8888888 0 9999 2222 44 2 44 3 2222 1111111111 3 55 3 666 1 3 0 3 3 55 555 3 2 3 55 3 7 1 3 3 99999 3 3 55 88 3 0 3 1 111 4 11 7777 3 3 22 44 2 3 7 4
lowQualScore : .. . .. . . . . . . . . ... . ...... . . ...... .. .... . ... . .. ..... .. . . ... . . . . . .. . . . .. . . ............. . . . . .. . . ... ... . . . ... .. .. . . ... . . . . .. ... . . ... . .. . . . .. ... . ...... . ... ..... . . .. . .... . . . . . . . .. . . . .. . . .. ... . ....... . . ........ . . . ..... . .. . ... .. ....... . . . . . . . . . . . . . . ......... ............. . . . ... .. ........................................ .... . . . . .... . . . .... ... . . . . . .. ....... . .... . ... . .. . . .. . . . . . . .. . . .. . ....... . .... .... .. . .. . .... .......... . .. . ... . . . . . .. ... . . . .. . . . . . ..... . . .. .. . . . . ... . .. .... . . .. .. . . . .
lowQualScore : 22 1 11 1 5 6 8 7 6 6 4 000 6 888888 9 0 555555 55 5555 0 000 0 55 00000 55 6 6 555 6 6 6 0 6 99 4 0 4 66 0 0 4444444444444 7 4 4 4 11 4 7 888 999 0 0 0 888 99 99 0 0 666 1 7 7 7 00 888 0 0 000 4 99 7 0 7 99 777 7 000000 4 777 99999 7 7 66 7 7777 7 7 4 7 4 3 6 99 0 0 0 55 0 0 55 000 0 7777777 0 0 99999999 0 6 0 00000 6 33 6 444 11 4444444 1 1 1 1 1 3 3 3 3 2 1 2 1 7 333333333 2222222222222 3 3 3 999 66 8888888888888888888888888888888888888888 1111 9 9 9 9 1111 9 6 9 1111 666 6 1 0 1 1 00 8888888 2 0000 3 888 7 55 6 5 55 5 0 0 0 0 0 55 3 3 66 9 5555555 2 9999 9999 66 2 66 3 9999 8888888888 6 00 6 444 6 6 5 6 6 00 222 6 7 6 00 6 3 3 6 4 99999 6 6 00 11 6 3 6 1 222 0 66 7777 2 1 11 22 7 1 6 8
consensus : AGGGTTG--TCCCAAAAAG-TC--GTGG-ACAAT-G-TTGA-TAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAG------ATATTTTT-ACA-TT------AATA--ACT----TTA-ACT---T-A--CA-----TCAAA--CAAAA-GTGTAAAA--TT-TAAAA-CAA-ATA-TCATATCAAATAAATG-AGCTATTTC-AG-ATTAAGG-------------AGTGCTC-TAT-GA-G--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATTTT-CTAT-AATCCA-TT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-TAA---TAGATATATCGCATTCGAATTTATATC-AACGGAATCTATGATGTTTTCTG-CG-T---ATTA-TA-CTAGG-TTTTCAA--GCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-C-GGCAACC-ACGGACA-TTGTCGGCGCA-CAG-ATAAAT-TA--NCAAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCGGACAAAAAC-GAGG-GCTGGAACGG--A-C-A--TCAGA-TCACAGGA-A--GTG--T-AGCAAA-ATGANGACATT-GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCC----CCTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GACTTCGA---------C---ACC-CA-CC-TTA--CTC--CC-------TA-G-----CACTT----------ATA-GCAACCGCTCGATTTTG----CCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTG-ATTCG-GAAG----G--AGATA---NTAGAGGAGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CATG-AAAAATGCATCGCGC-AT-CGGGG--ACAATACT--TTGAAAA-A--GAA----CTCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-ATG----AA--CATGG-GTGTT-TG--ATTTTTGTTTT-A---TGTT-AATATTAAGAGA-T-A--C-A-TTTTGATGAA-AATTTGT-AC--A-AA-GTAG-TAA-C---A-AAT-GA--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TTCTN-ACAAATAAA----CGAATTATCAA-CATTGTCC-ACGA--C--TTTTTGGGA-CAACCC-TCGT
Reference ( gi|2 ) : AGGGTTG--TCCCAAAAAG-TC--GTGG-ACAAT-G-TTAA-TAATTTC-C-AAGCTACGC-A-TCAGAT-CCAAAAG------ATATTTTT-ACA-TT------AATA--ACT----TTA-ACT---T-A--CA-----TCAAA--CAAAA-GTGTTAAC--TT-TAAAA-CAA-ACA-TCATATAAAATGAATG-AGCTACTTT-AG-ATTAAAG-------------AGTGTTC-TAT-GA-G--CCATGTTGGCGCA-CATACAAATATAAGTGTACATTGT-CTAT-AATCCA-TT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-TAA---TAGATATATCGCATTCGAATTTATATC-AACGGAATATATGATGTTTTCTG-CG-T---ATTA-TA-CTAAA-TTTTTAA--GCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-G-GGCAACCAACGGACA-TTGTCGGCGCA-CAT-ATAAAT-TA--ATAAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTC-GACAAAAAC-G-GG-GCTGGAACGG--A-C-A--TCATG-TCACAGGA-A--GTG--T-AGCAAA-ATAAAAAAATT-GAAAA-TA-----TCATAAATC-ATC---ATTACC-ATGCC----CC-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-CG---------GACTTCGA--------TC---ACC-CA-CC-TTA--ATC--CC--G----TA-G-----TATTTA---------ATA-GCAACCGCTCGATTTTG----CCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GAAGG-GGCAAACATTTG-ATTTT-GAAG----G--AAATA---ATAGAGGAGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGCGTGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT--AAAAATGCATCGCGC-AT-CGGGG--ATACTAAT--TTGATAA-G--GAA----CTCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-ATG----AA--GTTGG-GCGTT-TG--ATTTTTGTTTT-A---TGCT-AATATTAAAAGA-T-A--C-A-TTTTGATGAA-AATTGGT-AC--A-AA-GTAG-TAA-T---A-AAT-GA--TGCTAAT-AAAT-AGGTA-AAGAAACTTAATTCAATT-TTCTT-ACAAATAAA----CGAATTATCAA-CATTGTCC-ACGA--C--TTTTGGGGA-CAA-CC-TCGT
gi|4 : AGGGTTG--TCCCAAAAAG-TC--GTGG-ACAAT-G-TTAA-TAATTTC-C-AAACTACAC-A-TCAGAT-CCAAAAG------ATATTTTT-ACA-TT------AATA--ACT----TTA-ACT---T-A--CA-----TCAAA--CAAAA-GTGTTAAA--TT-TAAAA-CAA-ATA-TCATATCAAATGAATG-AGCTATTTT-AG-ATCAAAG-------------AGTGCTC-TAT-GA-G--CCATGTTGGCGCA-CATACAAATATAAGTTTACATTTT-CTAT-AATCCA-TT-GGG---TTAGGT--GAAAGG--A-TATAGCTTCA-TAA---TAGATATATCGCATTCAAATTTATATC-AACGGAATATATGATGTTTTCTG-CG-T---ATTA-TA-CTAGA--CTTTAATGGCGTAAGACGTCATAAATGGCAGAGAA-ATTATGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-C-GGCAACC-AC-GACA-TTGTCGGCGCA-CAG-ATAAAT-TA--TAAAA-TGTT-GTG-TAGATCGTGTTTGGACTCCCGCTT-GG-AAAAACGG-GG-GCTGGAATGG--A-C-A--TCATG-TCACAGGA-AT-GT---T-AGCAAA-AT-ATAAAATT-G-AAA-TA-----TTAT-AATC-ATC---ATTACA-ATGCC----CT-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-TG---------GACTTCGA---------C---ACC-CA-CC-TTA--ATC--CC-------TA-G------ACTTT---------ATA-GC-ACCGCTCGATTTTG----CCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCTT-GAAGG-GGCAAACATTTG-ATTTG-GAAG----G--AGATA---ATAGAGGAGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAA-ATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAA--AAAAATGCATCGCGC-AT-CGGGG--ACAATACT--TTGATAA-G--GAA----CTCT--GATAACGTCATGGTTTGTGCGCCGACAG--AT-ATG----AA--CATGG-GCG-T-TG--ATTTTTGTTTT-A---TGCT-AATATTAAGAGA-T-A--C-A--TTTGATG-A-AATTTGT-AC--A-AA-GTAG-T-A-T---A-AAT-GA--TGCTAAT-AAAT-AGGTA-AAGAAATTTAATT-AATT-TTCTTAACAAATAAA----CGAATTATCAGCCATGATCC-ACGA--C--TTTTGGGGA-CAACCC-TCGT
gi|4 : cgAGGGTTG--TCCCCAAAAG-TC--GTGG-ATCATGG-CTGA-TAATT
gi|1 : cgagggttgtcccaaaaagtcgtggacaatgttaataatttccaaactacacatcagatccaaaagatatttttacattaataactttaacttacatcaaacaaaagtgttaaatttaaaacaaatatcatatcaaatgaatgagctattttagatcaaagagtgctctatgagccatgttggcgcacatacaaatataagtttacattttctataatccattgggttaggtgaaaggatatagcttcataatagatatatcgcattcaaatttatatcaacggaatatatgatgttttctgcgtattatactagactttaatggcgtaagacgtcataaatggcagagaaattatgtcattttaaaacggctctgtaatgaatgtttttcaatgtaacggcaaccacgacattgtcggcgcacagataaattataaaatgttgtgtagatcgtgtttggactcccgcttggaaaaacgggggctggaatggacatcatgtcacaggaatgttagcaaaatataaaattgaaatattataatcatcattacaatgccctgcgcatacatcggctgaaatagatgtaaaactcgaggttattggacttcgacacccaccttaatccctagactttatagcaccgctcgattttgcctattttctacttatgaaggccagcttgaaggggcaaacatttgatttggaaggagataatagaggagcagcgaggaatttcaacgtgtttctgaatcaggctggtttgaaatgtgtttgacaaatgggtgaaacgacaaaaaaatgcatcgcgcatcggggacaatactttgataaggaactctgataacgtcatggtttgtgcgccgacagatatgaacatgggcgttgatttttgttttatgctaatattaagagatacatttgatgaaatttgtacaaagtagtataaatgatgctaataaataggtaaagaaatttaattaattttcttaacaaataaacgAGGGTTG--TCCTAAAAAG-TC--GTGG-ACAAT-G-TTAA-TAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAC------ATATTTTT-ACA-TT------AATA--ACT----TTA-ACT---T-A--CA-----TAAAA--CAAAA-GTGTAAAA--TT-TAAAA-CAA-ATA-TCTTTTAAAATAAATG-AGTTATTTC-AG-ATTAAGG-------------AGTACTC-TAT-GA-G--CCATGTTAGCGCA-TGGCTAAATATAAGTAAACATTTT-CTAT-GATCCA-TT-GGG---TTAGAT--AAAAGG--A-CATACCTTCA-TAA---TAGATAAATCGCACTCAAATTTATATC-AACGGAATTTATGATATTTTCTG-CC-T---AATA-TA-CTAGG-TTTTCAA--GCCTAAGACGTCATCAATTGTAGAGAA-ATAACATCA-TTTT---AAACA-GCTCTGTAATGAATTTTTT--C---CAATCTAA-T-GGCAACC-AC-GACA-TTGTCTGCGCA-CAG-ATATAT-TA--TCAAATT-TT-GTG-TAGATCTTGGTTTGACTCCGACTCAGAC-AAAAC-GAGA-GCAGGAACGG--A-C-A--TCAGA-TCACAGGA-AT-GT---T-AGAAAA-AT-ATGACATT-GAAAA-TA-----TTACAAATC-ATC---ATTACG-ATCCC----CT-GCGGATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AGAACTC-TGGGTTA-T-CG---------AACTTCGA---------C---ACC-CA-CG-TTA--CTC--CC-------TA-GACTTACATTTACATGTATATATA-GC-ATCGCTCG-TTTTG----GCTAA-T-TTTCT-A----C-TTAT-GA----A---GGCCAGTTT-G-AGG-GGCAAACATTTG-ATTTA-AAAG----T--ATATA---TTAGAGGAGC-A---GTGAGGA--ATGTCAATGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTCTGTTT-G-AAATAT-GGGTTAAA-CAA-TATG-AAAAATGCATCACGC-AT-CGGGG--ACAATGCT--TTAAAAA-A--GAA----CTCT--GATAACGTCATGATTTGTGCGCTGACAG--AT-ATG----AA--CAAAG-GTGTT-TG--ATTTT--TTTT-A---TGTT-AATATTAAGTGA-A-A--C-A-TTTTGATGAA-CATTTGT-AC--A-AA-GTAG-TAA-C---A-AAT-AA--TGCTAAT-AAAT-AGCAA-AAGAAAGTTGATATAATT-TTCAA-ACAAATAAA----TGAATTATCAA-CATTGTCC-ACGA--C--TTTTTGGGA-CAACCC-TCGTcgt
gi|1 : gAGGGTTG--TCCCAAAAAG-TC--GTGG-ACAAT-G-TTGA-TAATTa
gi|7 : gagggttgtcctaaaaagtcgtggacaatgttaataatttccaaactacgcatcagatccaaaacatatttttacattaataactttaacttacataaaacaaaagtgtaaaatttaaaacaaatatcttttaaaataaatgagttatttcagattaaggagtactctatgagccatgttagcgcatggctaaatataagtaaacattttctatgatccattgggttagataaaaggacataccttcataatagataaatcgcactcaaatttatatcaacggaatttatgatattttctgcctaatatactaggttttcaagcctaagacgtcatcaattgtagagaaataacatcattttaaacagctctgtaatgaattttttccaatctaatggcaaccacgacattgtctgcgcacagatatattatcaaattttgtgtagatcttggtttgactccgactcagacaaaacgagagcaggaacggacatcagatcacaggaatgttagaaaaatatgacattgaaaatattacaaatcatcattacgatcccctgcggatacatcggctgaaatagatgtagaactctgggttatcgaacttcgacacccacgttactccctagacttacatttacatgtatatatagcatcgctcgttttggctaattttctacttatgaaggccagtttgaggggcaaacatttgatttaaaagtatatattagaggagcagtgaggaatgtcaatgtgtctctgaatcaggcgtggtttgaaggtctgtttgaaatatgggttaaacaatatgaaaaatgcatcacgcatcggggacaatgctttaaaaaagaactctgataacgtcatgatttgtgcgctgacagatatgaacaaaggtgtttgattttttttatgttaatattaagtgaaacattttgatgaacatttgtacaaagtagtaacaaataatgctaataaatagcaaaagaaagttgatataattttcaaacaaataaatgAGGGTTG--TCCCAAAATG-TC--GTGG-ACAAT-G-CTGA-TAATTcgta
gi|3 : tcgcattcaaatttatatcaacggaatttgtgatgttttctgcctaatatactagttttcaaacgtaaaacgtcataaatggcagagaaatgacgtcattttaaaacggctctgtaatgatttttttttttcaatgtaacgacaaccacgacattgtcgacgcacagatatattatcaaatttagtgtagatcgtggtttggctctaactcagacaaatgggagatggaacggacatcagatcacaggaatgttagcaaaatatgacattgaaaatattatttatcatcattacaatgctcctgcgcatacatcggccgaaatagatgtagaactcgggattctcggacttcgacactcaccttactccctggacgtatatagcaccgctcgattttgcctattttctacttataaaggccagcttgagggcgcaaacattttattcggaaggagataatagaggagcagtgaggaatttcaacgtgtctctgaatcaggcgtggtttgaaggtatgtttgacaaatgggtgaaacgacatgaaaaatgcatcgcgcatcgaggacaatactttgagaaagaattatgataacgtcatgatttgtgcgccgacagatatgaacataggtgtttgatttttgttttatgttaatattaagagatacattttggtgaaaatttgcacaaagtagtaacaaatgatactaatagatatcaaaagaaagttaatacaattttcttacaaataaatgAGGGTTG--TCCAAAAAAG-TC--GTGGGATAAT-A-TTAA-TAATTTC-C-AAACTACGCTA-TCAGAT-CCAAAAG------ATATTTTTTACA-TT------AATATAACT----T-A-ACT---T-AAACA-----TTAAA--CATAA-GTGTAAAA--TT-TAAAATCAATACA-TTATA---AAT-AATG-AGCTATTTC-AG-ATTAAAGCTGTTACGCTCTGGGTGCTC-TAT-GAAG--CCATCTTGGCGCA-CGTACAAATATAGG-GAACATTTT-CTAT-AATTCAATT-GGGGGTTTAGAT--GAACGG--A-TATAGCCTCA-TAAAA-TAAATATAATGCATTCAAATTTATATC-AACG--ATCTATGATGTTTTCTT-CG-TTCTATTAATAACTAG--TTTTTCA--GCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCATTTTTA--AAACGTCCTCTGTAATGAATGTTTT--T---CAATGTAACG-TGCAACC-ACGG-CAGTTGTCGGCGCA-CACGATAAAT-TAT-CCAAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCACTCGGAC-AAAAC-GAGA-GCTGAAACGGCAG-C-A--TCAGA-TCATTGGA-A---TGATT-AAAAAA-ATAATGACATT-G-AAA-TA-----TTAT--ATCTATC---ATTACA-ACGCCA---CT-GCGCATAC-T-C-GG-CTTGAAATTACGA-TAGT--AAACTCGGGGGTTA-T-C----------GACTTCGA---------C---ACCGCACCC-TTACTACCAGCC--T----TA-------TATT-----------ATA-GGCACCGCTCGATTTTG-----CT-ATT-TTTCTAA----C-TTAT-GA----A---GGCCAGC-T-GAGGGTGGC-AACATTTGAAGTTT-GGCG----G--GATCA---ATAGAGGAGCAA---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTTA-GAAGGTGT-TTT-GAACAAATGGGGTGAAA-CGA-CATGGAAAAATGCATCGT-C-ATCCAGGG--AAAAT-AC--TTGAAAA-A--AAAAACCCCCA--TATAACGTCATGATTTGTGCGCCGACAG--AT-ATA----AAACATAAG-GTCTT-TA--ATTTTTGTTTT-A---TGTTAAATATTCAGAGAGT-A--C-ATTTTTGATGGACAATTTGT-AC--A-AACGTAG-TAA-TA--A-AAT-GAACTGCTAATGAAAT-AGCAA-AAGAAAGTTAATcgt
gi|6 : gAGGGTTG--TCCCAAAAAG-TC--GTGG-ACAAT-GATTGA-TAATTa
gi|13 : atagataaatgcagaaattttcagcattaaggagtgctctattgagccatgttggcgcaacgtgcaaatataagttacattcttctacgaattcattgggttagattggaaaggaatatagcttcaataaaagatacaatgcattgacttttatcaacggaatctatgatgtttctagcactattaatactggggttttcaagcataagacgtcataaggcagagaacatgacgtcattttataaaacggctctgtaagaatgttttcttcatgtaagcggcaaccaacgacattgtcggcgcagcgtataaatatactaaattttgtggtagatcgtggttgattccagctcgagacaaacgggagctggaacggaccatcaagatcacaggaatgtttagctaaatatgatattttgaaaatacttgattataatcatcagtacaatgccactgcgcatacattcgaactgaaatagaatgtagaactcggggttattcggatttcgacacccacccttaatctcctaagacttatatatgcaccgctcgattttgcctattttctactgttgactcgaagccagctttgagggggtaaacatttgattgtgaaggggagatataagaggagcacgtgcgagattcacatgtttctgaatcaggcgtggtttgaggatgtgcttcgacaaatgggtgaaaacgaacatgaaaaatggcaatggagcaatactttgaaaaggaactcttattatgtcatgacttgtgcgccgacagataatgaacaagtgtttgatttttgtttatgttaatattaagagataaccattttaatgaaaatttgacacaagagtaagtacaatgatgctaaataatagcaaaagaaatttaattcattttcttacaaataaacgAGGGTTG--TCCCAATAAG-TC--GTGA-GCAAT-A-TTGA-TAATTcgt
gi|9 : aactcggggttatcggacttcgacacccactttactcactagacttatatagcaccgctcgattttgcctatattctacttttgaagaccagcttgagggggcaaacatttaattcgaaaggagatattagaggagcagtgaggaattttaacttgtctctgaatcaggcgtggattgtaggtgtgtttgacaaatgggtgaaaccacatgaaaaatgtgttgcgcatggggacaatactttgaaaaagaactttgataacgtcataatatgtgcaccgacagatatggacataggtgttttatttttatgctatgctaatatcatgagatacattttgatgaaaatttgtacaaagtggtcaaaaatgatgttaataaataagaaaagaaagttgatacaattttttaacaaataaatgatcgAAGGTTG--TCCCAAAAAG-TG--GTGG-ACAAT-G-TTTA-TAATTT-----ATTCATTT-G-TCAGA----AAATGGCATTAACGTTCTT-AGC-TC------AATG--ATTAGCATTATACTTTGT-A--CAAATTTTCATG--AAAAA-GTAT---C--TTGTAATA-TAA-ACA-TAACACAAAATcg
gi|10 : ggagatggaacaagcatcaaatcacaaaaatgttagcaaaagatgacattgaaaatatcatttatcaaaatgacaatgcccctgcgcatacatcggctgaaatatatctagaactcagggttatcggatgtcaacgacttcctcacccactttactccccagacttagcatttttgcatcaattttgcatatttttcacattcgaaggccagcttgaggaggcaaatatttgattcggaaaaagatattagaagagcagtgaggaattctaacttgcccctgaattagatgtggtttgaaggtgtgtttgacaaatgggtgaaacgatctgaaaaatgcattgcgcatcggggacattactttgaaaaagaactctgataacgtcatgatttgtgatccaacagatctgtacaaaggtgatgaaAAGGTTG--TCC-AAAAAG-TG--GTGG-ACAAT-G-TTTA-TAATTTcgta
gi|19 : gatggaacaaagcatcaaatcacaaaatagttagcaaaagatgacattgaaaatatcatttatcaaaatgacaatgcccctgcgcatacatcggctgaatatatctagaaccagggttaatcggatgtcaacgacttcctcacccactttatccccagacttagcattttgcatcaattttgatatttttcacattcgaaggccagcttgaggaggcaaatatttgattcgggaaaagatattagaagagcagtgaggaattctaacttgcccctgaattagatgtggtttgaaggtgtgtttgacaaatgggtgaaacgatctgaaaaatgcattgcgcatcggggagttactttgaaaaagaactctgataacgtcatgatttgtgatccaacagatctgtacaaaggtgatgaaattttggttatttttaatattacaagatactttttcatgaaaatttgtacaaagtataatgctaatattgagctaagaacgttaatgcattttctgacaaatgaatAGGGTTG--TCCCAAAAAG-TC--GTGG-ACAAT-G-TTGA-TAATTTC-C-AAATTAC-------AGGC-CCAAAAG------ATATTTTA-ACA-TT------AATA--ACT----TTA-ACT---T-A--CA-----TCAAA--CAAAA-GTG-TAACA-TT-TAAAA-TAA-ATA-TCATAACATGTGAATG-AGCTATTTC-AG-cgta
gi|20 : gAGGGTTG--TCCCAAAAAG-TCTCGTGG-CCAAC-G-TTCA-TAATTTC-C-AAACTACGC-AATCAGATTCCAAAAG------ATTTTTTTTACA-TA------AATA--ACT----TTA-ACT---T-A--CT-----TCAAA--CAAAA-GTGTAAAA--TT-TTAAA-GAA-ATATTCAT
gi|28 : AGGGTTG--TCCCAAAAAG-TC--GTGG-ACACT-G-TTGC-TAATT
gi|21 : taaatgAGGGTTG--TCCCACGTAC-TC--GTAG-ACAAT-G-TTGT-TAGTTTT-CGAAATTA-GC-A-TCAAAT-CCATAGG------A---TTTT-ACA-TGGAAAAAAAAA--ACC----TTATACT---T-A--TT-----CTAAA--CAAAA-A-GGTAACAATT-TGAAA-TGG-GCA-Tcgta
gi|33 : AGGGTTG--TCCCAAAAAG-TC--GTGG-ACAAT-G-TTGA-Taa
gi|31 : AAGGTTG--TCCCAAAAAG-TG--GTGG-ACAAT-G-TTTA-TAATTcgt
gi|30 : agctacgAGGGTTGGTCCCCAAAAAGGTC--GTGG-ACAAT-G-TTGA-TAAATT
gi|29 : ctAGGGTTGGTCCCCAAAAAGGTC--GTGG-ACAAT-G-TTGA-TAAATTcgt
gi|25 : ctAAGATTA--TCCCTAAAC--TT--GTGG-ACAAT-G-TCAA-TAACTTC-A-AAAACGCGC-A-TCAGAT-CAAAAcgt
gi|37 : cgAGGGTTG--TCCAAAAAAG-TC--GTGG-ACAAT-G-
gi|35 : AGGGTTG--TCCCAAAAAG-TC--GTGG-ANGAT-tg
gi|5 : tacgGGTTG--TCCCAAAAAG-TC--GTGG-ACAAT-G-TTAA-TAATTTC-C-AAGCTACGC-A-TCAAAT-CCAAAAG------ATA-TTTT-ACATTT------AATA--ACT----TTA-ACT---TAA--CA------CAAA--CAAAA-GTGTTAAC--TT-TAAAA-CAA-ACA-TCATATAAAATGAATG-A-CTACTTT-A--ATTAAAG-------------AGTGTTCTTAT-GA-G--CCATGTTGGCGCA-CATACAAATATAAGTGTACA-TGT-CTAT-AATCCA--T-GGG---TT-GAT--GAAAGG--A-TATAGCTTCA-TAA---TAGATATATCGCATTCGAA-TTATATC-AACGGAATATATGATGTTTTCTG-CG-T---ATTA--A-CTAAA-TTTTTAA--GCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-G-GGCAACC-AC-GACA-TTGTCGGCGCA-CAT-ATAAAT-TA--ATAAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCGGACGAAAAA-G-GG-GCTGGAACGG--A-C-A--TCATG-TCACAGGA-A--GTG--T-AGCAAA-ATAAAAAAATT-G-AAA-TA-----TCATAAATC-ATC---ATTA-C-ATGCC----CC-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GTAAAAACTC-GAGGTTA-T-CG---------GACTTCGA--------T----ACC-CA-CC-TTA--ATC--CC-------TA-G-----TACTTT---------ATA-GC-ACCGCTCGATTTTG----CCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GAA-G-GGCAAACATTTG-ATTTT-GAAG----G---AATAC--ATAGAGGAGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT---AAAATGCATCGCGC-AT-C-GGG--ATACTAAT--TTGATAA-G--GAA----CTCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-A------GA--GTTGG-GCGTTATG--A-TTTTGTTTT-A---TGCT-AATATTAAAAGA-T-A--C-A--TTTGATGAA-AATTGGT-AC--A-AA-GTAA-TGA-----A-AAT-GA--TGCTAAT-AAAT--GGTA-A--GAACTTAATTCATTT-TCCTTCACAAA-ATA----CGAATTATCAA-CATTGTCC-ACGA-----TTTTGGGGA-CAA-CC-TCGT
gi|5 : GGTTG--TCCCCAAAA--TC--GTGG-ACAAT-G-TTGA-TAATTa
gi|11 : ggttgtcccaaaaagtcgtggacaatgttaataatttccaagctacgcatcaaatccaaaagatattttacatttaataactttaacttaacacaaacaaaagtgttaactttaaaacaaacatcatataaaatgaatgactactttaattaaagagtgttcttatgagccatgttggcgcacatacaaatataagtgtacatgtctataatccatgggttgatgaaaggatatagcttcataatagatatatcgcattcgaattatatcaacggaatatatgatgttttctgcgtattaactaaatttttaagcgtaagacgtcataaatggcagagaaatgacgtcattttaaaacggttctgtaatgaatgcttttcaaggtaagggcaaccacgacattgtcggcgcacatataaattaataaatttgtgtagatcgtggtttgactcccgctcggacgaaaaaggggctggaacggacatcatgtcacaggaagtgtagcaaaataaaaaaattgaaatatcataaatcatcattacatgccccgcgcatacatcggctgaaatagatgtaaaaactcgaggttatcggacttcgatacccaccttaatccctagtactttatagcaccgctcgattttgcctattttctacttatgaaggccagcatgaagggcaaacatttgattttgaaggaatacatagaggagcagcgaggaatttcaacgtgtttctgaatcaggctggtttgaagatgtgtttgacaaatgggtgaaacgacataaaatgcatcgcgcatcgggatactaatttgataaggaactctgatcacgtcatgatttgtgcgccgacagatagagttgggcgttatgattttgttttatgctaatattaaaagatacatttgatgaaaattggtacaaagtaatgaaaatgatgctaataaatggtaagaacttaattcattttccttcacaaaatacgGGTTG--TCC-AAAAAG-TC--GTGG-ACAAT-G-TTAATTAATtcgta
gi|27 : ttaacggacaagttagatcacagaaactgtatagcaaagatgaacattgaaaactattgaaccatcttcattacagatgcccctgtgcatacatcggccaaaatagatgtagaatcggttaaacagacttcaacacccaacacgactttgcctaattccacttttgaaacgttcagcttgagggtaaacatttgatttggaaaagatttagaggagcagtgaatataatttcaacttgtctctgaatcggcgtggtttttaaaagtgtgtttgacaataggtgaaagacataaaaatgcatcgcgccatcggggtacagtacttcataaaaagatttcttggataacgtcatgttgtgcgccgacagatatgaacatgaagtgttttatttttgtttttatgttgattaagaataccttttgatgaaattttgtacaaaagtagtaacaaatgatgctaataaatcaggaataagaaaaataatacattttccaacaaataaacgGGTTG--TCCCAAAATG-TT--GTGA-ACATT-G-TTAA-TGATTTT-C-AAAATATGC-C-TCAAAC-Ctctc
gi|8 : aTG--TCCCAAAAAG-TC--GTGGGACAAT-G-TACA-TAATTTCGC-AAACTACGC-A-TCAGAT-CCAAAAG------ATATTTTT-AC--TT------AATA--ACT----TTA-ACT---T-A--CA-----TCAAAAACAAAA-GTGTAAAA--TT-TAAAA-CAA--TA-TCATATCAAATAAATG-AGCTATTTC-AG-ATTAAGG-------------GGTGCTC-TAT-GA-GAGCCATGTTGGCGCA-CGTACAAATATACGTGAACATTTT-CTAT-GATCCA-TT-GGG---TTAGAT--GAAATG--A-TATAGCCTCA-TAA---TAAATGTATCGCATTCAAATTTATATCAAACGGAATCTATGATGTTTTCTGTTT-T---ATTA-CA-CTAGG-TTTTCAA--GCGTAAGACGTCATAAATGGCAGAGAA-AT--------TTTAA--AAACG-TCTCTGTAATGAATGTTTT--T---CAATGTAA-C-GGCAACC-AC-GACG-TTGTCGGCGCA-CAG-ATAAAT-TATCA-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCAACTCGGAC-AAAAC-GAGA-GCTGGAACGG--A-C-A--TCAGA-TCATTGGA-A--ATGT-T-AGCAAA-AT-AAGACATT-G-AAA-TA-----TTATAAATC-ATC---A-TACA-ATGCC----CCTGCGCATACAT-CGGG-C-TGAAT-TA-GA-T-GT-AGAA-----AGGTTA-
gi|22 : -TT------AATA--ACT----TTA-ACT---T-A--CA-----CCAAA--CAAAAAGTGTAAAA--TT-TAAAA-TAA-AGA-TCTTAACAAATAAATG-AGCTATTAC-AG-ATGAAGG-------------AGTGCTC-TAT-CA-G--CCATGTTGGCATA-CGTACAAATATAggatctgttggtgttcggagggtcgccccactcctcacctgatctcc
gi|17 : AA-GTGTAAAA--TC-TAAAA-CAA-ATA-TCATATCTAATAAATG-AGCTATTTA-AT-ATTAAGG-------------GGTGCTT-TAT-GA-G--CCATATTGGCGCA-CGTACAAATATAGGTGAATATTTT-CGAT-GATCCA-TTGGGG---TTAGAT--GGAAAG--A-TATAGCCTCA-TAA---TAGATATATCGCAT
gi|6 : AGATAAATGCAGAAATTTTCAGCATTAAGG-------------AGTGCTC-TATTGA-G--CCATGTTGGCGCAACGTGCAAATATAAGT-TACATTCTTCTACGAATTCA-TT-GGG---TTAGATTGGAAAGG--AATATAGCTTCAATAA---AAGATACAATGCATT-GACTTT-TATC-AACGGAATCTATGATGTTTCTAG-CACT---ATTAATA-CTGGGGTTTTCAA--GCATAAGACGTCATAA--GGCAGAGAACATGACGTCA-TTTTATAAAACG-GCTCTGTAA-GAATGTTTTCTT---CA-TGTAA-GCGGCAACCAACG-ACA-TTGTCGGCGCAGCGT-ATAAATATA--CTAAA-T-TTTGTGGTAGATCGTGGTT-GATTCCAGCTC-GAGACAAAC-G-GGAGCTGGAACGG--A-CCA--TCAAGATCACAGGA-AT-GTT--T-AGCTAA-ATATGATATTTTGAAAA-TACTTGATTATAA-TC-ATC---AGTACA-ATGCCA---CT-GCGCATACATTC-GAAC-TGAAA-TA-GAAT-GT-AGAACTC-GGGGTTA-TTCG---------GATTTCGA---------C---ACC-CA-CCCTTA--ATC--TC--C----TA-A-----GACTTAT--------ATATGCA-CCGCTCGATTTTG----CCT-A-T-TTTCT-A----C-TGTT-GACTCGA---AGCCAGCTTTGAGGG-GGTAAACATTTG-ATTGT-GAAG----GGGAGATA---TAAGAGGAGC-ACGTGCGAGA-----TTCA-CATGTTTCTGAATCAGGCGTGGTTT--GAGGATGTGCTTCG-ACAAAT-GGGTGAAAACGAACATG-AAAAATG------GC-AA-TGGAGCAATACT-----TTGAAAA-G--GAA----CTCT--TATTATGTCATGACTTGTGCGCCGACAG--ATAATG----AA----CAA-GTGTT-TG--ATTTTTG-TTT-A---TGTT-AATATTAAGAGA-T-AACC-A-TTTTAATGAA-AATTTG--AC--ACAA-G-AG-TAAGT---ACAAT-GA--TGCTAAA-TAAT-AGCAA-AAGAAATTTAATTC-ATT-TTCTT-ACAAATAAA----CGAATTATCAATCATTGTCC-ACGA--C--TTTTTGGGA-CAACCC-TCGT
gi|15 : atTA-AGCTATTTC-AG-ATTAAGG-------------AGAGTTC-TCT-CA-G--CCTTGTTGGCGCA-TGTACAAAGATAAG------TTG----A--AATTTA-TT-GGG---TTAGAT--GAAAGGACA-TATAGCTTCA-TAACTTTATATATATTT--TTTTAATGTATAT
gi|7 : TCGCATTCAAATTTATATC-AACGGAATTTGTGATGTTTTCTG-CC-T---AATA-TA-CTAG--TTTTCAA--ACGTAAAACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGATTTTTTT--TTTTCAATGTAA-C-GACAACCA-CG-ACA-TTGTCGACGCA-CAG-ATATAT-TA--TCAAA-T-TTAGTG-TAGATCGTGGTTTGGCTCTAACTCAGACAAA--T-G-GGAGATGGAACGG--A-C-A--TCAGA-TCACAGGA-A---TG--TTAGCAAA-ATATGACA-TT-GAAAA-TA-----TTATTTATC-ATC---ATTACA-ATGCT----CCTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGATTC-T-CG---------GACTTCGA---------C---ACT-CA-CC-TTA--CTC--CCT-G----GACG-----TAT------------ATA-GCA-CCGCTCGATTTTG----CCT-A-T-TTTCT-A----C-TTAT-AA----A---GGCCAGCTT-GAGGG-CGCAAACATTTT-ATTCG-GAAG----G--AGATA---ATAGAGGAGC-A---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTATGTTT-G-ACAAAT-GGGTGAAA-CGA-CATG-AAAAATGCATCGCGC-AT-CGAGG--ACAATACT--TTGAGAA-A--GAA----TTAT--GATAACGTCATGATTTGTGCGCCGACAG--AT-ATG----AA--CATAG-GTGTT-TG--ATTTTTGTTTT-A---TGTT-AATATTAAGAGA-T-A--C-A-TTTTGGTGAA-AATTTGC-AC--A-AA-GTAG-TAA-C---A-AAT-GA--TACTAAT-AGAT-ATCAA-AAGAAAGTTAATACAATT-TTCTT-ACAAATAAA----TGAATTATCAG-CATTGTCC-ACGA--C--ATTTTGGGA-CAACCC-TCGTtttattttttttatttttataatatagctttattgggttag
gi|32 : -T---ATTA-TA-CTAAG-TTTTCAA--GCGCAAGACGTCATAAATGGCAG
gi|9 : t-G-GA-GATGGAACAA--G-C-A--TCAAA-TCACAAAA-A---TG--TTAGCAAA-A-GATGACATT-GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCC----CCTGCGCATACAT-C-GG-C-TGAAA-TA-TA-T-CT-AGAACTC-AGGGTTA-T-CG---------GATGTCAACGACTTCCTC---ACC-CA-CT-TTA--CTC--CCCAGACT-TA-G-----CATTT-----------TT-GCA-----TCAATTTTG----CAT-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTG-ATTCG-GAAA----A--AGATA---TTAGAAGAGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCTG-AAAAATGCATTGCGC-AT-CGGGG--ACATTACT--TTGAAAA-A--GAA----CTCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CTGTAC-AA-----AG-GTGAT-GA--AATTTTGTGTT-A---TGTT-TATATTACAAGA-T-A--C-T-TTTTCATGAA-AATTTGT-AC--A-AA-GT--------------AT-AA--TGCTAAT-CATT-GAGCT-AAGAACGTTAATGCCATT-TTCTG-ACAAATGAA----TAAATTATAAA-CATTGTCC-ACCA--C--TTTTTGGGA-CAA-CCTTCGT
gi|10 : TGGAACAA--AGC-A--TCAAA-TCACAAAATA--GT---T-AGCAAA-A-GATGACATT-GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCC----CCTGCGCATACAT-C-GG-C-TGAA--TA-TA-T-CT-AGAAC-C-AGGGTTAAT-CG---------GATGTCAACGACTTCCTC---ACC-CA-CT-TTA--TCC--CC--AGACTTA-G-----CATTT-----------T--GCA-----TCAATTTTG----A-T-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTG-ATTCG-GGAA----A--AGATA---TTAGAAGAGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCTG-AAAAATGCATTGCGC-AT-CGGGG--A-GTTACT--TTGAAAA-A--GAA----CTCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CTGTACAAA--GGTGA-------TGAAATTTTGGTTAT-----TTTT-AATATTACAAGA-T-A--C-T-TTTTCATGAA-AATTTGT-AC--A-AA-GT--------------AT-AA--TGCTAAT--ATT-GAGCT-AAGAACGTTAATGC-ATT-TTCTG-ACAAATGAA----TAAATTATAAA-CATTGTCC-ACCA--C--TTTT-TGGA-CAA-CCTTCGTa
gi|11 : gaAACGG--A-C-AAGTTAGA-TCACAGAA-ACTGTA--T-AGCAAAGATGAACA--TT-GAAAACTA-----T--TGAACC-ATCTTCATTACAGATGCC----CCTGTGCATACAT-C-GG-C-CAAAA-TA-GA-T-GT-AGAA-TC-G--GTTA-AACA---------GACTTCAA-----------------CA-CC-------------------------------------------------CAACA---CGACTTTG----CCT-A-A-TTCC--A----C-TTTT-GA----AAC-GTTCAGCTT-GA--G-GGTAAACATTTG-ATTTG-GAAA----A--GATT-----TAGAGGAGC-A---GTGAATATAATTTCAACTTGTCTCTGAATC-GGCGTGGTTTTTAAAAGTGTGTTT-G-ACAA-T-AGGTGAAA--GA-CAT--AAAAATGCATCGCGCCAT-CGGGG---TAC-AGTACTTCATAA-AAAGAT----TTCTTGGATAACGTCATG--TTGTGCGCCGACAG--AT-ATG----AA--CATGAAGTGTT-TT--ATTTTTGTTTTTA---TGTT-GAT--TAAGA-A-T-A--C-C-TTTTGATGAA-ATTTTGT-AC--A-AAAGTAG-TAA-C---A-AAT-GA--TGCTAAT-AAATCAGGAATAAGAAAAATAATACA-TT-TTCCA-ACAAATAAA----CGATTAATTAA-CATTGTCC-ACGA--C--TTTT-TGGA-CAA-CC-TCa
gi|14 : ttATC-ATC---ATAATA-ATGCCTGGGCT-GCGCATACAT-C-GA-C-TGAAA-CT-GA-T-CT-AGAATTC-GGAGTTA-T-CGAATTTCAAAGACTTCCA---------C---ACC-CA-TC-TTA--TTC--CC------------------TTT--------------------GCTCCATTTTG----CCT-G-T-TTTCC-G----T-TTTT-GA----A---GGCCAACTT-GAGGG-GACATAAATTTG-ATCCG-GTAG----A--AAATtc
gi|23 : aatattg-ATGCC----CCTGTGCATACAT-C-GG-C-CGAAA-
gi|18 : acgcgcatcagatcaaaaatgttaggaaaaggtggcattgacattaaagtagtaata-C-GA-C-CGAAA-TA-GA-T-CT-AGAACTC-GGAGTTA-T-TG---------GATTTCAAAGACT---TCCCTACC-CA-CG-TCA--CTC--CT-------CA-G------ACTTA---------GTT-ACA----------TTTGGCGGCCT-A-T-TTTCC-A----C-TT---------------------T-TAAAG-AGCAAAAATTTG-ATTTTGGAAG----A--AGATATATATAGAGGAGC-A---GCg
gi|13 : AACTC-GGGGTTA-T-CG---------GACTTCGA---------C---ACC-CA-CT-TTA--CTC--AC-------TA-G------ACTTAT--------ATA-GCA-CCGCTCGATTTTG----CCT-A-T-ATTCT-A----C-TTTT-GA----A---GACCAGCTT-GAGGG-GGCAAACATTTA-ATTCG-AAAG----G--AGATA---TTAGAGGAGC-A---GTGAGGA--ATTTTAACTTGTCTCTGAATCAGGCGTGGATT--GTAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CCA-CATG-AAAAATGTGTTGCGC-AT--GGGG--ACAATACT--TTGAAAA-A--GAA----CTTT--GATAACGTCATAATATGTGCACCGACAG--AT-ATG----GA--CATAG-GTGTT-TT--ATTTTTATGCT-A---TGCT-AATATCATGAGA-T-A--C-A-TTTTGATGAA-AATTTGT-AC--A-AA-GTGG-TCA-A---A-AAT-GA--TGTTAAT-AAAT-AAGAA-AAGAAAGTTGATACAATT-TTTTA-ACAAATAAATGATCGAATTATCAA-TATTGCTC-ACGA--C--TTATTGGGA-CAACCC-TCG
gi|34 : TA-GCA-TCGCTCGATTTTG----CCT-A-T-TTTCT-A----C-TTAT-GA----
gi|12 : GCTCGATTT-G----CCT-A-GGTTTCT-GAGGTCGTTATCGT----ATCCGGCCAGCTT-GAGGG-TGCACAAATT---GTTTT-GGAGGGATG--AGGTG---AGAGGGAGGT-A---GTGAGG
gi|24 : AATGCATCGCGC-AT-CGGGG--AAAATA-C--TTGAGAA-A--AAAAAC-CTCT--GATAACGCCATGATTTGTGCGCCGACAG--AT-ATG----AA--ggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgatgtcatcagttgtgcgccgacagcaatatgacataggtcttatttatgttttaatgtgttgatattaaagataacaattttgataaatttgtcacgaaaagtagataatcaaaaatggatgctaatcatacgaaaagaaagttaatactattcttcttacaataaatga
gi|26 : CATCACGC-AT-CGGGG--ACAAT-AC--TTGAAAACA--AAA----CTCT--GATAACGTCATGATTTGTGCGC
gi|12 : aATGTCATCAGTTGTGCGCCGACAGCAAT-ATG----AC--ATAG----GTC-TT--ATTTATGTTTT-AATGTGTT-GATATT-AAAGA-TAA--CAA-TTTTGAT--A-AATTTGTCACGAA-AA-GTAGATAA-TCAAA-AATGGA--TGCTAAT--CAT-ACGAA-AAGAAAGTTAATACTATTCTTCTT-AC-AATAAA----TGA
gi|28 : gctcgatttgcctaggtttctgaggtcgttatcgtatccggccagcttgagggtgcacaaattgttttggagggatgaggtgagagggaggtagtgaggggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgTAAA----TGAATTAGCAA-CAGTGTCC-ACGA--C--TTTTTGGGA-CAACCC-TCGT
gi|5 : AATTATTAA-CATTGTCC-ACGA--C--TTTTTGGGA-CAA-CC-a
gi|4 : AATTATTAA-CATTGTCC-ACGA--C--TTTTTGGGA-CAACCC-TCGtccaagctacgcatcaaatccaaaagatattttacatttaataactttaacttaacacaaacaaaagtgttaactttaaaacaaacatcatataaaatgaatgactactttaattaaagagtgttcttatgagccatgttggcgcacatacaaatataagtgtacatgtctataatccatgggttgatgaaaggatatagcttcataatagatatatcgcattcgaattatatcaacggaatatatgatgttttctgcgtattaactaaatttttaagcgtaagacgtcataaatggcagagaaatgacgtcattttaaaacggttctgtaatgaatgcttttcaaggtaagggcaaccacgacattgtcggcgcacatataaattaataaatttgtgtagatcgtggtttgactcccgctcggacgaaaaaggggctggaacggacatcatgtcacaggaagtgtagcaaaataaaaaaattgaaatatcataaatcatcattacatgccccgcgcatacatcggctgaaatagatgtaaaaactcgaggttatcggacttcgatacccaccttaatccctagtactttatagcaccgctcgattttgcctattttctacttatgaaggccagcatgaagggcaaacatttgattttgaaggaatacatagaggagcagcgaggaatttcaacgtgtttctgaatcaggctggtttgaagatgtgtttgacaaatgggtgaaacgacataaaatgcatcgcgcatcgggatactaatttgataaggaactctgatcacgtcatgatttgtgcgccgacagatagagttgggcgttatgattttgttttatgctaatattaaaagatacatttgatgaaaattggtacaaagtaatgaaaatgatgctaataaatggtaagaacttaattcattttccttcacaaaatacgaattatcaacattgtccacgattttggggacaacctcgta
gi|1 : AATTATTAA-CATTGTCC-ACGA--C--TTTTTAGGA-CAA-CC-tccaaactacacatcagatccaaaagatatttttacattaataactttaacttacatcaaacaaaagtgttaaatttaaaacaaatatcatatcaaatgaatgagctattttagatcaaagagtgctctatgagccatgttggcgcacatacaaatataagtttacattttctataatccattgggttaggtgaaaggatatagcttcataatagatatatcgcattcaaatttatatcaacggaatatatgatgttttctgcgtattatactagactttaatggcgtaagacgtcataaatggcagagaaattatgtcattttaaaacggctctgtaatgaatgtttttcaatgtaacggcaaccacgacattgtcggcgcacagataaattataaaatgttgtgtagatcgtgtttggactcccgcttggaaaaacgggggctggaatggacatcatgtcacaggaatgttagcaaaatataaaattgaaatattataatcatcattacaatgccctgcgcatacatcggctgaaatagatgtaaaactcgaggttattggacttcgacacccaccttaatccctagactttatagcaccgctcgattttgcctattttctacttatgaaggccagcttgaaggggcaaacatttgatttggaaggagataatagaggagcagcgaggaatttcaacgtgtttctgaatcaggctggtttgaaatgtgtttgacaaatgggtgaaacgacaaaaaaatgcatcgcgcatcggggacaatactttgataaggaactctgataacgtcatggtttgtgcgccgacagatatgaacatgggcgttgatttttgttttatgctaatattaagagatacatttgatgaaatttgtacaaagtagtataaatgatgctaataaataggtaaagaaatttaattaattttcttaacaaataaacgaattatcagccatgatccacgacttttggggacaaccctcgt
gi|3 : gagAATTATTAA-TATTATCCCACGA--C--TTTTTTGGA-CAA-CC-tccaaactacgcatcagatccaaaacatatttttacattaataactttaacttacataaaacaaaagtgtaaaatttaaaacaaatatcttttaaaataaatgagttatttcagattaaggagtactctatgagccatgttagcgcatggctaaatataagtaaacattttctatgatccattgggttagataaaaggacataccttcataatagataaatcgcactcaaatttatatcaacggaatttatgatattttctgcctaatatactaggttttcaagcctaagacgtcatcaattgtagagaaataacatcattttaaacagctctgtaatgaattttttccaatctaatggcaaccacgacattgtctgcgcacagatatattatcaaattttgtgtagatcttggtttgactccgactcagacaaaacgagagcaggaacggacatcagatcacaggaatgttagaaaaatatgacattgaaaatattacaaatcatcattacgatcccctgcggatacatcggctgaaatagatgtagaactctgggttatcgaacttcgacacccacgttactccctagacttacatttacatgtatatatagcatcgctcgttttggctaattttctacttatgaaggccagtttgaggggcaaacatttgatttaaaagtatatattagaggagcagtgaggaatgtcaatgtgtctctgaatcaggcgtggtttgaaggtctgtttgaaatatgggttaaacaatatgaaaaatgcatcacgcatcggggacaatgctttaaaaaagaactctgataacgtcatgatttgtgcgctgacagatatgaacaaaggtgtttgattttttttatgttaatattaagtgaaacattttgatgaacatttgtacaaagtagtaacaaataatgctaataaatagcaaaagaaagttgatataattttcaaacaaataaatgaattatcaacattgtccacgactttttgggacaaccctcgta
gi|8 : gagAATTATGTA-CATTGTCCCACGA--C--TTTTTGGGA-CAtccaaactacgctatcagatccaaaagatattttttacattaatataacttaacttaaacattaaacataagtgtaaaatttaaaatcaatacattataaataatgagctatttcagattaaagctgttacgctctgggtgctctatgaagccatcttggcgcacgtacaaatatagggaacattttctataattcaattgggggtttagatgaacggatatagcctcataaaataaatataatgcattcaaatttatatcaacgatctatgatgttttcttcgttctattaataactagtttttcagcgtaagacgtcataaatggcagagaaatgacgtcatttttaaaacgtcctctgtaatgaatgtttttcaatgtaacgtgcaaccacggcagttgtcggcgcacacgataaattatccaaatttgtgtagatcgtggtttgactcccactcggacaaaacgagagctgaaacggcagcatcagatcattggaatgattaaaaaaataatgacattgaaatattatatctatcattacaacgccactgcgcatactcggcttgaaattacgatagtaaactcgggggttatcgacttcgacaccgcacccttactaccagccttatattataggcaccgctcgattttgctatttttctaacttatgaaggccagctgagggtggcaacatttgaagtttggcgggatcaatagaggagcaagtgaggaatttcaacgtgtctctgaatcaggcgtggtttagaaggtgttttgaacaaatggggtgaaacgacatggaaaaatgcatcgtcatccagggaaaatacttgaaaaaaaaaacccccatataacgtcatgatttgtgcgccgacagatataaaacataaggtctttaatttttgttttatgttaaatattcagagagtacatttttgatggacaatttgtacaaacgtagtaataaaatgaactgctaatgaaatagcaaaagaaagttaata
gi|19 : AATTATCAA-CATTGTCC-ACGA--C--TTTTTGGGA-CAA-CC-tcgcaaactacgcatcagatccaaaagatatttttacttaataactttaacttacatcaaaaacaaaagtgtaaaatttaaaacaatatcatatcaaataaatgagctatttcagattaaggggtgctctatgagagccatgttggcgcacgtacaaatatacgtgaacattttctatgatccattgggttagatgaaatgatatagcctcataataaatgtatcgcattcaaatttatatcaaacggaatctatgatgttttctgttttattacactaggttttcaagcgtaagacgtcataaatggcagagaaattttaaaaacgtctctgtaatgaatgtttttcaatgtaacggcaaccacgacgttgtcggcgcacagataaattatcaaaatttgtgtagatcgtggtttgactccaactcggacaaaacgagagctggaacggacatcagatcattggaaatgttagcaaaataagacattgaaatattataaatcatcatacaatgcccctgcgcatacatcgggctgaattagatgtagaaaggttaggatctgttggtgttcggagggtcgccccactcctcacctgatctcc
gi|20 : gagAATTATGAA-CGTTGGCC-ACGAGAC--TTTTTGGGA-CAA-CC-tccaaattacaggcccaaaagatattttaacattaataactttaacttacatcaaacaaaagtgtaacatttaaaataaatatcataacatgtgaatgagctatttcag
gi|21 : agAACTAACAA-CATTGTCT-ACGA--G--TACGTGGGA-CAA-CC-tccaaactacgcaatcagattccaaaagattttttttacataaataactttaacttacttcaaacaaaagtgtaaaattttaaagaaatattcat
gi|27 : agAATCATTAA-CAATGTTC-ACAA--C--ATTTTGGGA-CAA-CC-ttcgaaattagcatcaaatccataggattttacatggaaaaaaaaaaccttatacttattctaaacaaaaaggtaacaatttgaaatgggcataa
gi|31 : AATTATAAA-CATTGTCC-ACCA--C--TTTTTGGGA-CAA-CCTTCGTttcaaaatatgcctcaaacc
gi|25 : agctAGTTATTGA-CATTGTCC-ACAA-----GTTTAGGGA-TAA-TC-
gi|30 : cgaTTATCAA-CATTGTCC-ACGA--CCTTTTTGGGGACCAACCC-TCGTtcaaaaacgcgcatcagatcaaaa
gi|29 : ctaatTTATCAA-CATTGTCC-ACGA--CCTTTTTGGGGACCAACCC-TCGT
gi|33 : ctaatATCAA-CATTGTCC-ACGA--C--TTTTTGGGA-CAACCC-TCGT
gi|37 : -CATTGTCC-ACGA--C--TTTTTTGGA-CAA-CC-
gi|35 : ATCNTCC-ACGA--C--TTTTTGGGA-CAACCC-TCGTcttg
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|16 ): ATTTGTGCGGCAAAACCTATAATAGATGTTTTCTATGTCATTATGAAAAAAAAATTTTTTTTTTAAATCACAGAAGAACGATACCATTAGATAACAAAAGAAAACGAAAATTTTTCTAACCAATATATGAATGATTAACATTGTTGAGGACGCGTTAGGAAATCTCATA
Unaligned ( gi|36 ): AAAATCAAAAGCAAATGTGATCCACCATTTTT
Alignments
lowQualScore : 111111 2222222222222 1111 1 1111 1 1 3333333 11 1 111111111 222222222 666666666666666666666666666666666666666 222222222
lowQualScore : 55 7 4 3 3 3 3 3 8 4 111111 55 4 4 55 55 3 3 4 4 3 1 3 3 3 2222222222222 4 4 4 55 4 33 4 4 4 4 777 66 66 4 4 66 777 1 5 3 5 3333 4 777 88 4 5 1 5 66 5 66 888 5 5 5 8 5 5 5 5 0000 5 5 0 5 0 2 55 1 3 8 44 3 3 44 3 3 1111111 3 3 88 4 44 7 3 88888 0 3 555 0 3 555 2 2 2 44 2 3 3 3 3 2 2 6 222222222 444444444 555 3 888888 3 3 3 4 3 3 555555555555555555555555555555555555555 5 444 2 2 2 2 5555 2 1 2 5555 888 2 1 2 66 0 33 2 9999 44 3 555 55 0 88 3 3 3 3 3 88 3 3 3 0 3 3 3 6666 3 44 33 2 2 555 3 444 0 3 555 3 3 77 6 3 3 3 555 44 3 6 3 000000000 3 44 33 3 1 3 0 2 7 3 3 77 1 6666 4 4 66 2
lowQualScore : .. . . . . . . . . . ...... .. . . .. .. . . . . . . . . . ............. . . . .. . .. . . . . ... .. .. . . .. ... . . . . .... . ... .. . . . . .. . .. ... . . . . . . . . .... . . . . . . .. . . . .. . . .. . . ....... . . .. . .. . . ..... . . ... . . ... . . . .. . . . . . . . . ......... ......... ... . ...... . . . . . . ....................................... . ... . . . . .... . . . .... ... . . . .. . .. . .... .. . ... .. . .. . . . . . .. . . . . . . . .... . .. .. . . ... . ... . . ... . . .. . . . . ... .. . . . ......... . .. .. . . . . . . . . .. . .... . . .. .
lowQualScore : 00 3 7 6 6 6 6 6 9 0 555555 55 0 0 55 55 6 6 0 0 9 9 6 6 6 0000000000000 0 0 0 55 0 99 4 4 4 4 888 11 11 4 4 11 888 7 0 4 0 6666 4 000 11 4 0 4 0 99 0 99 888 0 0 0 1 0 0 0 0 1111 0 0 0 0 1 5 22 2 2 9 66 3 3 66 3 3 2222222 3 3 11 2 66 3 3 33333 0 1 444 5 1 444 9 9 9 33 9 1 1 1 1 9 9 2 333333333 666666666 444 1 888888 1 1 1 7 1 1 666666666666666666666666666666666666666 3 777 7 7 7 7 7777 7 0 7 7777 999 9 2 9 88 9 99 9 5555 22 1 444 00 5 66 6 6 6 6 6 77 1 1 1 2 1 1 1 5555 1 22 99 9 9 666 1 888 6 1 444 1 1 33 2 1 1 1 444 22 1 2 1 444444444 1 22 55 1 5 1 2 2 4 3 3 99 0 5555 7 4 11 4
consensus : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATATTTTT-ACA-TT------AATA--ACTTTA-ACTT-A--CATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATG-AGCTATTT-CAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TA-TC-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAA-ATGATGACATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTACTC-CC-TAG-----CAC-T----------T-ATA------GC-ACC--GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AG-GTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
Reference ( family-3828 ) : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTGATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATATTTTT-ACA-TT------AATA--ACTTTA-ACTT-A--CATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATAAATG-AGCTATTT-CAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATCTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TA-NC-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGAGGGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAA-ATGANGACATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTACTC-CC-TAG-----CAC-T----------T-ATA------GCAACC--GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-GG-GTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|1 : AGGGTTGTCCTAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAACATATTTTT-ACA-TT------AATA--ACTTTA-ACTT-A--CATAAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCT-TTTAAAATAAATG-AGTTATTT-CAG-ATTAAG-------------GAGTACTC-TAT-G-AG--CCATGTTAGCGCA-TGGCTAAATATAAGTAAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--AAAAGG--A-CATACCTTCA-T--AA---TAGATAAATCGCACTCAAATTTATATC-AACGGAATTTATGATATTTTCTG-CC---TAAT-A-T-ACTAGG-TTTTCA-AGCCTAAGACGTCATCAATTGTAGAGAA-ATAACATCA-TTTT---AAACA-GCTCTGTAATGAATTTTTT--C---CAATCTAA-TG-GCAACC-AC-GACA-TTGTCTGCGCA-CA-GATATAT-TA-TC-AAATT-TT-GTG-TAGATCTTGGTTTGACTCCGACTCA-GAC-AAAACGAGAGCAGGAACGG--A-C-A--TCA-GATCACAGGA-A---TGT-T-AGAAAA-AT-ATGACATT--GAAAA-TA-----TTACAAATC-ATC---ATTACG-AT-CCC---CTGCGGATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AGAACTC-TGGGTTA-T-CG---------AA---------CTTC---GA-C------ACC-CA-CG-TTACTC-CC-TAGACTTACAT-TTACATGTATAT-ATA------GC-ATC--GC-TCG-TTT---TGGCTAA-T-TTTCT-A----C-TTAT-GA----A---GGCCAGTTT-GA-GG-GGCAAACATTTGA--TTTAAAAGT--A-TATA---TTAGAGG--AGC-A---GTGAGGA--ATGTCAATGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTCTGTTT-G-AAATAT-GGGTTAAA-CAA-TAT-GAAAAATGCATCACGC-AT-CGGGG-ACAATGCTTT-A-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCTGACAG--AT-AT-GAACAA-AG-GTGTT-TGATTTT--TTTT-A---TGTT-AATATTAAGTGA-AA--CA-TTTTGATGAA-CATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATA-A--TGCTAAT-AAAT-AGCAA-AAGAAAGTTGATATAATT-TT-C--AAACAAATAAA----TGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|10 : gTGGAACAA--AGC-A--TCA-AATCACAAAATA--GT---T-AGCAAA-A-GATGACATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAA--TA-TA-T-CT-AGAAC-C-AGGGTTAAT-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTA-TC-CC-CAG------AC-T----------T-A--------GCATTTT-GCATCAATTT---TGA-T-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGGAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-A-GTTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AG-GTGAT-GAAATTTTGGTTA-T---TTTT-AATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT--ATT-GAGCT-AAGAACGTTAATGC-ATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTT-GGA--CAACC-TTCGTa
gi|11 : gaAACGG--A-C-AAGTTA-GATCACAGAA-ACTGTA--T-AGCAAAGATGA--ACATT--GAAAACTA-----TT--GAACC-ATCTTCATTACAGATGCCC---CTGTGCATACAT-C-GG-C-CAAAA-TA-GA-T-GT-AGAA-TC-GG--TTA-AACA---------GA---------CTTC---AA-C------AC----------------C-CAA-----CAC------------------------------------GACTT---TGCCT-A-A-TTCC--A----C-TTTT-GA----AAC-GTTCAGCTT-GAGGG---TAAACATTTGA--TTTGGAAA---A-GAT----TTAGAGG--AGC-A---GTGAATATAATTTCAACTTGTCTCTGAATC-GGCGTGGTTTTTAAAAGTGTGTTT-G-ACAA-T-AGGTGAAA--GA-CAT--AAAAATGCATCGCGCCAT-CGGGGTACAGTACTTC-ATAAAA-AGAT----T-TCTTGGATAACGTCATG--TTGTGCGCCGACAG--AT-AT-GAACAT-GAAGTGTT-TTATTTTTGTTTTTA---TGTT-GAT--TAAGA-A-TA--CC-TTTTGATGAA-ATTTTG-T-A---C--AA-AAGT-AG-TAAC---AAATG-A--TGCTAAT-AAATCAGGAATAAGAAAAATAATACA-TT-TT-C--CAACAAATAAA----CGATTAATTAA-CATTGTCCACGA-CTTTTT-GGA--CAACCTCTCa
gi|12 : tt--GC-TCGATTT----GCCT-A-GGTTTCT-GAGGTCGTTATCGT----ATCCGGCCAGCTT-GAGGG-TGCACAAA-TTGT--TTTGGAGGG--ATGAGG---TGAGAGGGAGGT-A---GTGAGG
gi|12 : ATGTCATCAGTTGTGCGCCGACAGCAAT-AT-GA-CAT-AG-GTCTT---ATTTATGTTTT-AATGTGTT-GATATTAA-AGA-TAA-CAATTTTGAT--A-AATTTG-TCA---CGAAA-A-GT-AGATAATCAAAAATGGA--TGCTAAT-CA-T-ACGAA-AAGAAAGTTAATACTATTCTT-C--TTAC-AATAAA----TGAggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgatgtcatcagttgtgcgccgacagcaatatgacataggtcttatttatgttttaatgtgttgatattaaagataacaattttgataaatttgtcacgaaaagtagataatcaaaaatggatgctaatcatacgaaaagaaagttaatactattcttcttacaataaatga
gi|13 : gctcgatttgcctaggtttctgaggtcgttatcgtatccggccagcttgagggtgcacaaattgttttggagggatgaggtgagagggaggtagtgaggggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CT-TTACTC-AC-TAG------AC-TTA--------T-ATA------GC-ACC--GC-TCGATTT---TGCCT-A-T-ATTCT-A----C-TTTT-GA----A---GACCAGCTT-GAGGG-GGCAAACATTTAA--TTCGAAAGG--A-GATA---TTAGAGG--AGC-A---GTGAGGA--ATTTTAACTTGTCTCTGAATCAGGCGTGGATT--GTAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CCA-CAT-GAAAAATGTGTTGCGC-AT--GGGG-ACAATACTTT-G-AAAA-AGAA----C-TTT--GATAACGTCATAATATGTGCACCGACAG--AT-AT-GGACAT-AG-GTGTT-TTATTTTTATGCT-A---TGCT-AATATCATGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-GG-TCAA---AAATG-A--TGTTAAT-AAAT-AAGAA-AAGAAAGTTGATACAATT-TT-T--TAACAAATAAATGATCGAATTATCAA-TATTGCTCACGA-CTTATTGGGA--CAACC-CTCG
gi|14 : TATTGATC-ATC---ATAATA-ATGCCTGGGCTGCGCATACAT-C-GA-C-TGAAA-CT-GA-T-CT-AGAATTC-GGAGTTA-T-CGAATTTCAAAGA---------CTTC---CA-C------ACC-CA-TC-TTATTC-CC-T-----------T----------T------------------GC-TCCATTT---TGCCT-G-T-TTTCC-G----T-TTTT-GA----A---GGCCAACTT-GAGGG-GACATAAATTTGA--TCCGGTAGA--A-AAT
gi|15 : aaTA-AGCTATTT-CAG-ATTAAG-------------GAGAGTTC-TCT-C-AG--CCTTGTTGGCGCA-TGTACAAAGATAAGTTGAAATT-T------------ATT-GGG---TTAGAT--GAAAGGACA-TATAGCTTCA-T--AACTTTATATATATTT--TTTTAATGTATAT
gi|16 : ATTTGTGCGGCAAAAC--CT-AT-AA---T-AG-ATGTT-T---------TCT-A---TGTC-ATTATGAAAAAA--A--AA-TTTT--T------TTTT-T-AAATC--AC-A-GA-AG---------AACG-A--TACCATT-AGAT-AACAA-AAGAAAACGAA---AATT-TTTC--TAACCAATATA----TGAATGATTAA-CATTGTTGAGGA-CGCGTTAGGA--tttattttttttatttttataatatagctttattgggttag
gi|17 : AA-GTGTAA-AATCTAAAACAAATA-TCA-TATCTAATAAATG-AGCTATTT-AAT-ATTAAG-------------GGGTGCTT-TAT-G-AG--CCATATTGGCGCA-CGTACAAATATAGGTGAATATT-TTCGAT-GATCC-ATTGGGG---TTAGAT--GGAAAG--A-TATAGCCTCA-T--AA---TAGATATATCGCATaatctcata
gi|18 : -C-GA-C-CGAAA-TA-GA-T-CT-AGAACTC-GGAGTTA-T-TG---------GA---------TTTCAAAGA-CTTCCCTACC-CA-CG-TCACTC-CT-CAG------AC-T-------------TA------GTTAC---------ATTTGGCGGCCT-A-T-TTTCC-A----C-TTTT-AA----A-----------------G-AGCAAAAATTTGAT-TTTGGAAGA--A-GATATATATAGAGG--AGC-A---GC
gi|19 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTGATAATTTC-C-AAATTAC-------AGGC-CCAAAAGATATTTTA-ACA-TT------AATA--ACTTTA-ACTT-A--CATCAAA--CAAAA-GTGTAA-CATTTAAAATAAATA-TCA-TAACATGTGAATG-AGCTATTT-CAG-
gi|2 : gAGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAGAT-CCAAAAGATATTTTT-ACA-TT------AATA--ACTTTA-ACTT-A--CATCAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATG-AGCTACTT-TAG-ATTAAA-------------GAGTGTTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACATT-GTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACCAACGGACA-TTGTCGGCGCA-CA-TATAAAT-TA-AT-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTC--GACAAAAACG-GGGCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAA-ATAAAAAAATT--GAAAA-TA-----TCATAAATC-ATC---ATTACC-ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GATC------ACC-CA-CC-TTAATC-CCGTAG-----TAT-T----------TAATA------GCAACC--GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GAAGG-GGCAAACATTTGA--TTTTGAAGG--A-AATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGCGTGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT--AAAAATGCATCGCGC-AT-CGGGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-AT-GAAGTT-GG-GCGTT-TGATTTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA-TTTTGATGAA-AATTGG-T-A---C--AA-A-GT-AG-TAAT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAACTTAATTCAATT-TT-C--TTACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTGGGGA--CAA-C-CTCGT
gi|20 : AGGGTTGTCCCAAAAAGTCTCGTGG-CCAACGTTCATAATTTC-C-AAACTACGC-AATCAGATTCCAAAAGATTTTTTTTACA-TA------AATA--ACTTTA-ACTT-A--CTTCAAA--CAAAA-GTGTAA-AATTTTAAAGAAATATTCA-T
gi|21 : AGGGTTGTCCCACGTACTC--GTAG-ACAATGTTGTTAGTTTT-CGAAATTA-GC-A-TCAAAT-CCATAGGA---TTTT-ACA-TGGAAAAAAAAA--ACCTTATACTT-A--TTCTAAA--CAAAA-AGGTAACAATTTGAAA
gi|22 : -TT------AATA--ACTTTA-ACTT-A--CACCAAA--CAAAAAGTGTAA-AATTTAAAATAAAGA-TCT-TAACAAATAAATG-AGCTATTA-CAG-ATGAAG-------------GAGTGCTC-TAT-C-AG--CCATGTTGGCATA-CGTACAAATATAtgggcataa
gi|23 : ACGC--G-C-A--TCA-GATCA---AA-A--ATG--TTAGGAAA-A-GGTGGCATT--GA----CA-----TTA-AAGTA-GTA---AT---A-ATGCCC---CTGTGCATACAT-C-GG-C-CGAAA-
gi|24 : AATGCATCGCGC-AT-CGGGG-AAAATACTTGAG-AAAA-AAAA----CCTCT--GATAACGCCATGATTTGTGCGCCGACAG--AT-AT-GAAg
gi|25 : AAGATTATCCCTAAAC-TT--GTGG-ACAATGTCAATAACTTC-A-AAAACGCGC-A-TCAGAT-CAAAA
gi|26 : cgCATCACGC-AT-CGGGG-ACAATAC-TT-G-AAAACAAAA----C-TCT--GATAACGTCATGATTTGTGCGC
gi|27 : aGGTTGTCCCAAAATGTT--GTGA-ACATTGTTAATGATTTT-C-AAAATATGC-C-TCAAAC-C
gi|28 : aTAAA----TGAATTAGCAA-CAGTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|29 : TTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|3 : ctaatAGGGTTGTCCAAAAAAGTC--GTGGGATAATATTAATAATTTC-C-AAACTACGCTA-TCAGAT-CCAAAAGATATTTTTTACA-TT------AATATAACTT-A-ACTT-AAACATTAAA--CATAA-GTGTAA-AATTTAAAATCAATA--CATTAT-AAAT-AATG-AGCTATTT-CAG-ATTAAAGCTGTTACGCTCTGGGTGCTC-TAT-GAAG--CCATCTTGGCGCA-CGTACAAATATAGG-GAACATT-TTCTAT-AATTCAATT-GGGGGTTTAGAT--GAACGG--A-TATAGCCTCA-TAAAA---TAAATATAATGCATTCAAATTTATATC-AACG--ATCTATGATGTTTTCTT-CGTTCTATTAA-TAACTAGT-TTTTC--AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCATTTTTA--AAACGTCCTCTGTAATGAATGTTTT--T---CAATGTAA-CGTGCAACC-ACGG-CAGTTGTCGGCGCA-CACGATAAAT-TATCC-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCACTCG-GAC-AAAACGAGAGCTGAAACGGCAG-C-A--TCA-GATCATTGGA-A---TGATT-AAAAAA-ATAATGACATT--G-AAA-TA-----TTAT--ATCTATC---ATTACA-ACGCCA---CTGCGCATAC-T-C-GG-CTTGAAATTACGA-TAGT-A-AACTCGGGGGTTA-T-C----------GA---------CTTC---GA-C------ACCGCACCC-TTACTA-CC--AG-----C-C-T----------T-ATATTATAGGC-ACC--GC-TCGATTT---TG-CT-ATT-TTTCTAA----C-TTAT-GA----A---GGCCAGC-T-GAGGGTGGC-AACATTTGAAGTTTGGCGGG--A-T-CA---ATAGAGG--AGCAA---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTTA-GAAGGTGT-TTT-GAACAAATGGGGTGAAA-CGA-CATGGAAAAATGCATCGT-C-ATCCAGGG-AAAATAC-TT-G-AAAA-AAAAAACCC-CCA--TATAACGTCATGATTTGTGCGCCGACAG--AT-ATAAAACATAAG-GTCTT-TAATTTTTGTTTT-A---TGTTAAATATTCAGAGAGTA--CATTTTTGATGGACAATTTG-T-A---C--AA-ACGT-AG-TAATA--AAATG-AACTGCTAATGAAAT-AGCAA-AAGAAAGTTAAT
gi|30 : gTTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|31 : ctaatAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGT
gi|32 : agct---TATT-A-T-ACTAAG-TTTTCA-AGCGCAAGACGTCATAAATGGCAG
gi|33 : tATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|34 : TA------GCA-TC--GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----
gi|35 : ATCNTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|37 : t-CATTGTCCACGA-CTTTTTTGGA--CAACC-CTTG
gi|4 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACAC-A-TCAGAT-CCAAAAGATATTTTT-ACA-TT------AATA--ACTTTA-ACTT-A--CATCAAA--CAAAA-GTGTTA-AATTTAAAACAAATA-TCA-TATCAAATGAATG-AGCTATTT-TAG-ATCAAA-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTTTACATT-TTCTAT-AATCC-ATT-GGG---TTAGGT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCAAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAGA-CTTTAATGGCGTAAGACGTCATAAATGGCAGAGAA-ATTATGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-GATAAAT-TA-TA-AAA-TGTT-GTG-TAGATCGTGTTTGGACTCCCGCTTG-G--AAAAACGGGGGCTGGAATGG--A-C-A--TCA-TGTCACAGGA-A---TGT-T-AGCAAA-AT-ATAAAATT--G-AAA-TA-----TTAT-AATC-ATC---ATTACA-ATG-CC---CTGCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-TG---------GA---------CTTC---GA-C------ACC-CA-CC-TTAATC-CC-TAG------ACTT----------T-ATA------GC-ACC--GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCTT-GAAGG-GGCAAACATTTGA--TTTGGAAGG--A-GATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAA-ATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CA--AAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-ATAA-GGAA----C-TCT--GATAACGTCATGGTTTGTGCGCCGACAG--AT-AT-GAACAT-GG-GCG-T-TGATTTTTGTTTT-A---TGCT-AATATTAAGAGA-TA--CA--TTTGATG-A-AATTTG-T-A---C--AA-A-GT-AG-T-AT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAATTTAATT-AATT-TT-CT-TAACAAATAAA----CGAATTATCAGCCATGATCCACGA-CTTTTGGGGA--CAACC-CTCGT
gi|5 : cgGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAAAT-CCAAAAGATA-TTTT-ACATTT------AATA--ACTTTA-ACTTAA--CA-CAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATG-A-CTACTT-TA--ATTAAA-------------GAGTGTTCTTAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACA-T-GTCTAT-AATCC-A-T-GGG---TT-GAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAA-TTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A---ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-TATAAAT-TA-AT-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACGAAAAAG-GGGCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAA-ATAAAAAAATT--G-AAA-TA-----TCATAAATC-ATC---ATTAC--ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GTAAAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GA-T------ACC-CA-CC-TTAATC-CC-TAG-----TACTT----------T-ATA------GC-ACC--GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GA-AG-GGCAAACATTTGA--TTTTGAAGG--A--ATAC--ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT---AAAATGCATCGCGC-AT-C-GGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-A--GAGT-T-GG-GCGTTATGA-TTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA--TTTGATGAA-AATTGG-T-A---C--AA-A-GT-AA-TGA----AAATG-A--TGCTAAT-AAAT-GGTAA----GAACTTAATTC-ATT-TT-CCTTCACAAA-ATA----CGAATTATCAA-CATTGTCCACGA--TTTTGGGGA--CAA-C-CTCGT
gi|6 : AGATAAATGCAGAAATTTTCAGCATTAAG-------------GAGTGCTC-TATTG-AG--CCATGTTGGCGCAACGTGCAAATATAAGT-TACATTCTTCTACGAATTC-ATT-GGG---TTAGATTGGAAAGG--AATATAGCTTCAAT--AA---AAGATACAATGCATT-GACTTT-TATC-AACGGAATCTATGATGTTTCTAG-CAC--TATT-AAT-ACTGGGGTTTTCA-AGCATAAGACGTCATAA--GGCAGAGAACATGACGTCA-TTTTATAAAACG-GCTCTGTAA-GAATGTTTTCTT---CA-TGTAAGCG-GCAACC-AACGACA-TTGTCGGCGCAGCG-TATAAATATA-CT-AAA-T-TTTGTGGTAGATCGTGGTT-GATTCCAGCTCGAGACAAA--CGGGAGCTGGAACGG--A-CCA--TCAAGATCACAGGA-AT-GTT--T-AGCTAA-AT-ATGATATTTTGAAAA-TACTTGATTAT-AATC-ATC---AGTACA-ATGCCA---CTGCGCATACATTC-GAAC-TGAAA-TA-GAAT-GT-AGAACTC-GGGGTTA-TTCG---------GA---------TTTC---GA-C------ACC-CA-CCCTTAATCTCC-TAA-----GAC-T----------T-ATATAT---GCA-CC--GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TGTT-GACTCGA---AGCCAGCTTTGAGGG-GGTAAACATTTGA--TTGTGAAGGGGA-GATA---TAAGAGG--AGC-ACGTGCGAGA-----TTCA-CATGTTTCTGAATCAGGCGTGGTTT--GAGGATGTGCTTCG-ACAAAT-GGGTGAAAACGAACAT-GAAAAATG------GC-AA-TGGAG--CAATACTTT-G-AAAA-GGAA----C-TCT--TATTATGTCATGACTTGTGCGCCGACAG--ATAAT-GAACA---A-GTGTT-TGATTTTTG-TTT-A---TGTT-AATATTAAGAGA-TAACCA-TTTTAATGAA-AATTTGAC-A---C--AAGA-GTAAG-T-AC----AATG-A--TGCTAAA-TAAT-AGCAA-AAGAAATTTAATTC-ATT-TT-C--TTACAAATAAA----CGAATTATCAATCATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGTa
gi|7 : atTCGCATTCAAATTTATATC-AACGGAATTTGTGATGTTTTCTG-CC---TAAT-A-T-ACTAG--TTTTCA-AACGTAAAACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGATTTTTTT--TTTTCAATGTAA-CG-ACAACC-ACG-ACA-TTGTCGACGCA-CA-GATATAT-TA-TC-AAA-T-TTAGTG-TAGATCGTGGTTTGGCTCTAACTCA-GACAAA--TGGGAGATGGAACGG--A-C-A--TCA-GATCACAGGA-AT-GT---T-AGCAAA-AT-ATGACATT--GAAAA-TA-----TTATTTATC-ATC---ATTACA-ATGCTC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGATTC-T-CG---------GA---------CTTC---GA-C------ACT-CA-CC-TTACTC-CC-TGGA----CGT-A----------T-ATA------GC-ACC--GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-AA----A---GGCCAGCTT-GAGGG-CGCAAACATTTTA--TTCGGAAGG--A-GATA---ATAGAGG--AGC-A---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTATGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGAGG-ACAATACTTT-G-AGAA-AGAA----T-TAT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AG-GTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGGTGAA-AATTTG-C-A---C--AA-A-GT-AG-TAAC---AAATG-A--TACTAAT-AGAT-ATCAA-AAGAAAGTTAATACAATT-TT-C--TTACAAATAAA----TGAATTATCAG-CATTGTCCACGA-CATTTTGGGA--CAACC-CTCGT
gi|8 : TGTCCCAAAAAGTC--GTGGGACAATGTACATAATTTCGC-AAACTACGC-A-TCAGAT-CCAAAAGATATTTTT-AC--TT------AATA--ACTTTA-ACTT-A--CATCAAAAACAAAA-GTGTAA-AATTTAAAACAA-TA-TCA-TATCAAATAAATG-AGCTATTT-CAG-ATTAAG-------------GGGTGCTC-TAT-G-AGAGCCATGTTGGCGCA-CGTACAAATATACGTGAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--GAAATG--A-TATAGCCTCA-T--AA---TAAATGTATCGCATTCAAATTTATATCAAACGGAATCTATGATGTTTTCTGTTT---TATT-A-C-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-AT--------TTTAA--AAACG-TCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACG-TTGTCGGCGCA-CA-GATAAAT-TA-TCAAAA-T-TT-GTG-TAGATCGTGGTTTGACTCCAACTCG-GAC-AAAACGAGAGCTGGAACGG--A-C-A--TCA-GATCATTGGA-A--ATGT-T-AGCAAA-AT-AAGACATT--G-AAA-TA-----TTATAAATC-ATC---A-TACA-ATGCCC---CTGCGCATACAT-CGGG-C-TGAAT-TA-GA-T-GT-AGAA-----AGGTTA-
gi|9 : TGGAACAA--G-C-A--TCA-AATCACAAAA-AT-GT---T-AGCAAA-A-GATGACATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAAA-TA-TA-T-CT-AGAACTC-AGGGTTA-T-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTACTC-CC-CAG------AC-T----------T-A--------GCATTTTTGCATCAATTT---TGCAT-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGAAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-ACATTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AG-GTGAT-GAAATTTTGTGTT-A---TGTT-TATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT-CATT-GAGCT-AAGAACGTTAATGCCATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGTggatctgttggtgttcggagggtcgccccactcctcacctgatctcc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36 ): AAAATCAAAAGCAAATGTGATCCACCATTTTT
Alignments
lowQualScore : 111111 2222222222222 1111 1 1 1 3333333 11 1 111111111 222222222 5555555555555555555555555555555 222222222
lowQualScore : 55 7 3 3 3 3 3 4 4 4 111111 55 4 99 55 3 3 4 4 3 2 3 2222222222222 4 4 4 55 4 33 4 4 4 4 777 66 66 4 4 66 777 1 5 1 5 3333 4 777 88 4 5 1 5 66 5 66 888 5 5 5 8 5 5 5 5 999 5 5 0 5 0 2 55 1 3 3 44 3 3 44 3 3 1111111 3 77 3 44 7 3 88888 0 3 555 0 3 555 2 2 2 44 2 3 3 3 3 2 2 6 222222222 444444444 555 3 888888 3 3 3 4 3 33 2222222222222222222222222222222 2 888 5 444 2 2 2 2 5555 2 1 2 5555 888 2 1 2 66 0 33 2 9999 44 3 555 55 0 88 3 3 3 3 3 88 3 3 3 0 3 3 3 6666 3 44 33 2 2 777 444 0 3 555 3 3 77 6 3 3 3 555 44 3 6 3 000000000 3 44 33 3 1 3 0 2 7 3 3 77 1 6666 4 4 66 2
lowQualScore : .. . . . . . . . . . ...... .. . .. .. . . . . . . . ............. . . . .. . .. . . . . ... .. .. . . .. ... . . . . .... . ... .. . . . . .. . .. ... . . . . . . . . ... . . . . . . .. . . . .. . . .. . . ....... . .. . .. . . ..... . . ... . . ... . . . .. . . . . . . . . ......... ......... ... . ...... . . . . . .. ............................... . ... . ... . . . . .... . . . .... ... . . . .. . .. . .... .. . ... .. . .. . . . . . .. . . . . . . . .... . .. .. . . ... ... . . ... . . .. . . . . ... .. . . . ......... . .. .. . . . . . . . . .. . .... . . .. .
lowQualScore : 00 3 6 6 6 6 6 4 4 0 555555 55 0 55 55 6 6 0 0 9 7 6 0000000000000 0 0 0 55 0 99 4 4 4 4 888 11 11 4 4 11 888 7 0 0 0 6666 4 000 11 4 0 4 0 99 0 99 888 0 0 0 1 0 0 0 0 111 0 0 0 0 1 5 22 2 2 6 66 3 3 66 3 3 2222222 3 22 3 66 3 3 33333 0 1 444 5 1 444 9 9 9 33 9 1 1 1 1 9 9 2 333333333 666666666 444 1 888888 1 1 1 7 1 22 3333333333333333333333333333333 9 333 3 777 7 7 7 7 7777 7 0 7 7777 999 9 2 9 88 9 99 9 5555 22 1 444 00 5 66 6 6 6 6 6 77 1 1 1 2 1 1 1 5555 1 22 99 9 9 444 888 6 1 444 1 1 33 2 1 1 1 444 22 1 2 1 444444444 1 22 55 1 5 1 2 2 4 3 3 99 0 5555 7 4 11 4
consensus : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTACTC-CC-TAG------AC-T----------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
Reference ( family-3828 ) : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTACTC-CC-TAG-----CAC-T----------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|1 : AGGGTTGTCCTAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAACATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATAAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCT-TTTAAAATAAATGAGTTATTTCAG-ATTAAG-------------GAGTACTC-TAT-G-AG--CCATGTTAGCGCA-TGGCTAAATATAAGTAAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--AAAAGG--A-CATACCTTCA-T--AA---TAGATAAATCGCACTCAAATTTATATC-AACGGAATTTATGATATTTTCTG-CC---TAAT-A-T-ACTAGG-TTTTCA-AGCCTAAGACGTCATCAATTGTAGAGAA-ATAACATCA-TTTT---AAACA-GCTCTGTAATGAATTTTTT--C---CAATCTAA-TG-GCAACC-AC-GACA-TTGTCTGCGCA-CA-GATATAT-TAT-C-AAATT-TT-GTG-TAGATCTTGGTTTGACTCCGACTCA-GAC-AAAACGAGAGCAGGAACGG--A-C-A--TCA-GATCACAGGA-A---TGT-T-AGAAAAAT-ATGA-CATT--GAAAA-TA-----TTACAAATC-ATC---ATTACG-AT-CCC---CTGCGGATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AGAACTC-TGGGTTA-T-CG---------AA---------CTTC---GA-C------ACC-CA-CG-TTACTC-CC-TAGACTTACAT-TTACATGTATAT-ATA------GC-ATC---GC-TCG-TTT---TGGCTAA-T-TTTCT-A----C-TTAT-GA----A---GGCCAGTTT-GA-GG-GGCAAACATTTGA--TTTAAAAGT--A-TATA---TTAGAGG--AGC-A---GTGAGGA--ATGTCAATGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTCTGTTT-G-AAATAT-GGGTTAAA-CAA-TAT-GAAAAATGCATCACGC-AT-CGGGG-ACAATGCTTT-A-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCTGACAG--AT-AT-GAACAA-AGGTGTT-TGATTTT--TTTT-A---TGTT-AATATTAAGTGA-AA--CA-TTTTGATGAA-CATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATA-A--TGCTAAT-AAAT-AGCAA-AAGAAAGTTGATATAATT-TT-C--AAACAAATAAA----TGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|10 : gTGGAACAA--AGC-A--TCA-AATCACAAAATA--GT---T-AGCAAAA-GATGA-CATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAA--TA-TA-T-CT-AGAAC-C-AGGGTTAAT-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTA-TC-CC-CAG------AC-T----------T-A--------GC-ATTTT-GCATCAATTT---TGA-T-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGGAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-A-GTTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AGGTGAT-GAAATTTTGGTTA-T---TTTT-AATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT--ATT-GAGCT-AAGAACGTTAATGC-ATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTT-GGA--CAACC-TTCGTa
gi|11 : gaAACGG--A-C-AAGTTA-GATCACAGAA-ACTGTA--T-AGCAAA--GATGAACATT--GAAAACTA-----TT--GAACC-ATCTTCATTACAGATGCCC---CTGTGCATACAT-C-GG-C-CAAAA-TA-GA-T-GT-AGAA-TC-GG--TTA-AACA---------GA---------CTTC---AA-C------ACC-C------------------------------------------A------AC-AC---------GACTT---TGCCT-A-A-TTCC--A----C-TTTT-GA----AAC-GTTCAGCTT-GAGGG---TAAACATTTGA--TTTGGAAA---A-GAT----TTAGAGG--AGC-A---GTGAATATAATTTCAACTTGTCTCTGAATC-GGCGTGGTTTTTAAAAGTGTGTTT-G-ACAA-T-AGGTGAAA--GA-CAT--AAAAATGCATCGCGCCAT-CGGGGTACAGTACTTC-ATAAAA-AGAT----T-TCTTGGATAACGTCATG--TTGTGCGCCGACAG--AT-AT-GAACATGAAGTGTT-TTATTTTTGTTTTTA---TGTT-GAT--TAAGA-A-TA--CC-TTTTGATGAA-ATTTTG-T-A---C--AA-AAGT-AG-TAAC---AAATG-A--TGCTAAT-AAATCAGGAATAAGAAAAATAATACA-TT-TT-C--CAACAAATAAA----CGATTAATTAA-CATTGTCCACGA-CTTTTT-GGA--CAACCTCTCa
gi|12 : tt---GC-TCGATTT----GCCT-A-GGTTTCT-GAGGTCGTTATCGT----ATCCGGCCAGCTT-GAGGG-TGCACAAA-TTGT--TTTGGAGGG--ATGAGG---TGAGAGGGAGGT-A---GTGAGG
gi|12 : ATGTCATCAGTTGTGCGCCGACAGCAAT-AT-GA-CAT-AGGTCTT---ATTTATGTTTT-AATGTGTT-GATATTAA-AGA-TAA-CAATTTTGAT--A-AATTTG-TCA---CGAAA-A-GT-AGATAATCAAAAATGGA--TGCTAAT-CA-T-ACGAA-AAGAAAGTTAATACTATTCTT-C--TTAC-AATAAA----TGAggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgatgtcatcagttgtgcgccgacagcaatatgacataggtcttatttatgttttaatgtgttgatattaaagataacaattttgataaatttgtcacgaaaagtagataatcaaaaatggatgctaatcatacgaaaagaaagttaatactattcttcttacaataaatga
gi|13 : gctcgatttgcctaggtttctgaggtcgttatcgtatccggccagcttgagggtgcacaaattgttttggagggatgaggtgagagggaggtagtgaggggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CT-TTACTC-AC-TAG------AC-T----------T-ATATA----GC-ACC---GC-TCGATTT---TGCCT-A-T-ATTCT-A----C-TTTT-GA----A---GACCAGCTT-GAGGG-GGCAAACATTTAA--TTCGAAAGG--A-GATA---TTAGAGG--AGC-A---GTGAGGA--ATTTTAACTTGTCTCTGAATCAGGCGTGGATT--GTAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CCA-CAT-GAAAAATGTGTTGCGC-AT--GGGG-ACAATACTTT-G-AAAA-AGAA----C-TTT--GATAACGTCATAATATGTGCACCGACAG--AT-AT-GGACAT-AGGTGTT-TTATTTTTATGCT-A---TGCT-AATATCATGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-GG-TCAA---AAATG-A--TGTTAAT-AAAT-AAGAA-AAGAAAGTTGATACAATT-TT-T--TAACAAATAAATGATCGAATTATCAA-TATTGCTCACGA-CTTATTGGGA--CAACC-CTCG
gi|14 : TATTGATC-ATC---ATAATA-ATGCCTGGGCTGCGCATACAT-C-GA-C-TGAAA-CT-GA-T-CT-AGAATTC-GGAGTTA-T-CGAATTTCAAAGA---------CTTC---CA-C------ACC-CA-TC-TTATTC-CC-T-----------T----------T-------------------GC-TCCATTT---TGCCT-G-T-TTTCC-G----T-TTTT-GA----A---GGCCAACTT-GAGGG-GACATAAATTTGA--TCCGGTAGA--A-AAT
gi|15 : aaTAAGCTATTTCAG-ATTAAG-------------GAGAGTTC-TCT-C-AG--CCTTGTTGGCGCA-TGTACAAAGATAAGTTGAAATT-T------------ATT-GGG---TTAGAT--GAAAGGACA-TATAGCTTCA-T--AACTTTATATATATTT--TTTTAATGTATAT
gi|16 : ATTTGTGCGGCAAAAC--CT-AT-AA---T-AGATGTT-T---------TCT-A---TGTC-ATTATGAAAAAA--A--AA-TTTT--T------TTTT-T-AAATC--AC-A-GA-AG---------AACG-A--TACCATT-AGAT-AACAA-AAGAAAACGAA---AATT-TTTC--TAACCAATATA----TGAATGATTAA-CATTGTTGAGGA-CGCGTTAGGA--tttattttttttatttttataatatagctttattgggttag
gi|17 : AA-GTGTAA-AATCTAAAACAAATA-TCA-TATCTAATAAATGAGCTATTTAAT-ATTAAG-------------GGGTGCTT-TAT-G-AG--CCATATTGGCGCA-CGTACAAATATAGGTGAATATT-TTCGAT-GATCC-ATTGGGG---TTAGAT--GGAAAG--A-TATAGCCTCA-T--AA---TAGATATATCGCATaatctcata
gi|18 : -C-GA-C-CGAAA-TA-GA-T-CT-AGAACTC-GGAGTTA-T-TG---------GA---------TTTCAAAGA-CTTCCCTACC-CA-CG-TCACTC-CT-CAG------AC-T----------T-A-----------------GT-TACATTTGGCGGCCT-A-T-TTTCC-A----C-TTTT-AA----A-----------------G-AGCAAAAATTTGAT-TTTGGAAGA--A-GATATATATAGAGG--AGC-A---GC
gi|19 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTGATAATTTC-C-AAATTAC-------AGGC-CCAAAAGATA-TTTTA-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-CATTTAAAATAAATA-TCA-TAACATGTGAATGAGCTATTTCAG-
gi|2 : gAGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATGAGCTACTTTAG-ATTAAA-------------GAGTGTTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACATT-GTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACCAACGGACA-TTGTCGGCGCA-CA-TATAAAT-TAA-T-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTC--GACAAAAACGGG-GCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAAATAAAAA-AATT--GAAAA-TA-----TCATAAATC-ATC---ATTACC-ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GATC------ACC-CA-CC-TTAATC-CCGTAG-----TAT-T----------TAATA------GCAACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GAAGG-GGCAAACATTTGA--TTTTGAAGG--A-AATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGCGTGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT--AAAAATGCATCGCGC-AT-CGGGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-AT-GAAGTT-GGGCGTT-TGATTTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA-TTTTGATGAA-AATTGG-T-A---C--AA-A-GT-AG-TAAT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAACTTAATTCAATT-TT-C--TTACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTGGGGA--CAA-C-CTCGT
gi|20 : AGGGTTGTCCCAAAAAGTCTCGTGG-CCAACGTTCATAATTTC-C-AAACTACGC-AATCAGATTCCAAAAGATT-TTTTTTACA-TA------A--ATAACTTTA-ACTT--ACTTCAAA--CAAAA-GTGTAA-AATTTTAAAGAAATATTCA-T
gi|21 : AGGGTTGTCCCACGTACTC--GTAG-ACAATGTTGTTAGTTTT-CGAAATTA-GC-A-TCAAAT-CCATAGGA----TTTT-ACA-TGGAAAAAA--AAAACCTTATACTT--ATTCTAAA--CAAAA-AGGTAACAATTTGAAA
gi|22 : -TT------A--ATAACTTTA-ACTT--ACACCAAA--CAAAAAGTGTAA-AATTTAAAATAAAGA-TCT-TAACAAATAAATGAGCTATTACAG-ATGAAG-------------GAGTGCTC-TAT-C-AG--CCATGTTGGCATA-CGTACAAATATAtgggcataa
gi|23 : ACGC--G-C-A--TCA-GATCA---AA-A--ATG--TTAGGAAAA-GGTGG-CATT--GA----CA-----TTA-AAGTA-GTA---AT---A-ATGCCC---CTGTGCATACAT-C-GG-C-CGAAA-
gi|24 : AATGCATCGCGC-AT-CGGGG-AAAATACTTGAG-AAAA-AAAA----CCTCT--GATAACGCCATGATTTGTGCGCCGACAG--AT-AT-GAAg
gi|25 : AAGATTATCCCTAAAC-TT--GTGG-ACAATGTCAATAACTTC-A-AAAACGCGC-A-TCAGAT-CAAAA
gi|26 : cgCATCACGC-AT-CGGGG-ACAATAC-TT-G-AAAACAAAA----C-TCT--GATAACGTCATGATTTGTGCGC
gi|27 : aGGTTGTCCCAAAATGTT--GTGA-ACATTGTTAATGATTTT-C-AAAATATGC-C-TCAAAC-C
gi|28 : aTAAA----TGAATTAGCAA-CAGTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|29 : TTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|3 : ctaatAGGGTTGTCCAAAAAAGTC--GTGGGATAATATTAATAATTTC-C-AAACTACGCTA-TCAGAT-CCAAAAGATATTTTTT-ACA-TT------AATATAAC-TTA-ACTTAAACATTAAA--CATAA-GTGTAA-AATTTAAAATCAATA--CATTAT-AAAT-AATGAGCTATTTCAG-ATTAAAGCTGTTACGCTCTGGGTGCTC-TAT-GAAG--CCATCTTGGCGCA-CGTACAAATATAGG-GAACATT-TTCTAT-AATTCAATT-GGGGGTTTAGAT--GAACGG--A-TATAGCCTCA-TAAAA---TAAATATAATGCATTCAAATTTATATC-AACG--ATCTATGATGTTTTCTT-CGTTCTATTAA-TAACTAGT-TTTTC--AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCATTTTTA--AAACGTCCTCTGTAATGAATGTTTT--T---CAATGTAA-CGTGCAACC-ACGG-CAGTTGTCGGCGCA-CACGATAAAT-TATCC-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCACTCG-GAC-AAAACGAGAGCTGAAACGGCAG-C-A--TCA-GATCATTGGA-A---TGATT-AAAAAAATAATGA-CATT--G-AAA-TA-----TTAT--ATCTATC---ATTACA-ACGCCA---CTGCGCATAC-T-C-GG-CTTGAAATTACGA-TAGT-A-AACTCGGGGGTTA-T-C----------GA---------CTTC---GA-C------ACCGCACCC-TTACTA-CC--AG-----C-C-T----------T-ATATTATAGGC-ACC---GC-TCGATTT---TG-CT-ATT-TTTCTAA----C-TTAT-GA----A---GGCCAGC-T-GAGGGTGGC-AACATTTGAAGTTTGGCGGG--A-T-CA---ATAGAGG--AGCAA---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTTA-GAAGGTGT-TTT-GAACAAATGGGGTGAAA-CGA-CATGGAAAAATGCATCGT-C-ATCCAGGG-AAAATAC-TT-G-AAAA-AAAAAACCC-CCA--TATAACGTCATGATTTGTGCGCCGACAG--AT-ATAAAACATAAGGTCTT-TAATTTTTGTTTT-A---TGTTAAATATTCAGAGAGTA--CATTTTTGATGGACAATTTG-T-A---C--AA-ACGT-AG-TAATA--AAATG-AACTGCTAATGAAAT-AGCAA-AAGAAAGTTAAT
gi|30 : gTTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|31 : ctaatAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGT
gi|32 : agct---TATT-A-T-ACTAAG-TTTTCA-AGCGCAAGACGTCATAAATGGCAG
gi|33 : tATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|34 : TA------GC-ATC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----
gi|35 : ATCNTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|37 : t-CATTGTCCACGA-CTTTTTTGGA--CAACC-CTTG
gi|4 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACAC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTTA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTTAG-ATCAAA-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTTTACATT-TTCTAT-AATCC-ATT-GGG---TTAGGT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCAAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAGA-CTTTAATGGCGTAAGACGTCATAAATGGCAGAGAA-ATTATGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-GATAAAT-TAT-A-AAA-TGTT-GTG-TAGATCGTGTTTGGACTCCCGCTTG-G--AAAAACGGGGGCTGGAATGG--A-C-A--TCA-TGTCACAGGA-A---TGT-T-AGCAAAAT-ATAA-AATT--G-AAA-TA-----TTAT-AATC-ATC---ATTACA-ATG-CC---CTGCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-TG---------GA---------CTTC---GA-C------ACC-CA-CC-TTAATC-CC-TAG------ACTT----------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCTT-GAAGG-GGCAAACATTTGA--TTTGGAAGG--A-GATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAA-ATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CA--AAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-ATAA-GGAA----C-TCT--GATAACGTCATGGTTTGTGCGCCGACAG--AT-AT-GAACAT-GGGCG-T-TGATTTTTGTTTT-A---TGCT-AATATTAAGAGA-TA--CA--TTTGATG-A-AATTTG-T-A---C--AA-A-GT-AG-T-AT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAATTTAATT-AATT-TT-CT-TAACAAATAAA----CGAATTATCAGCCATGATCCACGA-CTTTTGGGGA--CAACC-CTCGT
gi|5 : cgGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAAAT-CCAAAAGATA--TTTT-ACATTT------A--ATAACTTTA-ACTTA-ACA-CAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATGA-CTACTTTA--ATTAAA-------------GAGTGTTCTTAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACA-T-GTCTAT-AATCC-A-T-GGG---TT-GAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAA-TTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A---ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-TATAAAT-TAA-T-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACGAAAAAGGG-GCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAAATAAAAA-AATT--G-AAA-TA-----TCATAAATC-ATC---ATTAC--ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GTAAAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GA-T------ACC-CA-CC-TTAATC-CC-TAG-----TACTT----------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GA-AG-GGCAAACATTTGA--TTTTGAAGG--A--ATAC--ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT---AAAATGCATCGCGC-AT-C-GGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-A--GAGT-T-GGGCGTTATGA-TTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA--TTTGATGAA-AATTGG-T-A---C--AA-A-GT-AA-TGA----AAATG-A--TGCTAAT-AAAT-GGTAA----GAACTTAATTC-ATT-TT-CCTTCACAAA-ATA----CGAATTATCAA-CATTGTCCACGA--TTTTGGGGA--CAA-C-CTCGT
gi|6 : TTTCAGCATTAAG-------------GAGTGCTC-TATTG-AG--CCATGTTGGCGCAACGTGCAAATATAAGT-TACATTCTTCTACGAATTC-ATT-GGG---TTAGATTGGAAAGG--AATATAGCTTCAAT--AA---AAGATACAATGCATT-GACTTT-TATC-AACGGAATCTATGATGTTTCTAG-CAC--TATT-AAT-ACTGGGGTTTTCA-AGCATAAGACGTCATAA--GGCAGAGAACATGACGTCA-TTTTATAAAACG-GCTCTGTAA-GAATGTTTTCTT---CA-TGTAAGCG-GCAACC-AACGACA-TTGTCGGCGCAGCG-TATAAATATAC-T-AAA-T-TTTGTGGTAGATCGTGGTT-GATTCCAGCTCGAGACAAA--CGGGAGCTGGAACGG--A-CCA--TCAAGATCACAGGA-AT-GTT--T-AGCTAAAT-ATGA-TATTTTGAAAA-TACTTGATTAT-AATC-ATC---AGTACA-ATGCCA---CTGCGCATACATTC-GAAC-TGAAA-TA-GAAT-GT-AGAACTC-GGGGTTA-TTCG---------GA---------TTTC---GA-C------ACC-CA-CCCTTAATCTCC-TAA-----GAC-T----------T-ATATAT---GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TGTT-GACTCGA---AGCCAGCTTTGAGGG-GGTAAACATTTGA--TTGTGAAGGGGA-GATA---TAAGAGG--AGC-ACGTGCGAGA-----TTCA-CATGTTTCTGAATCAGGCGTGGTTT--GAGGATGTGCTTCG-ACAAAT-GGGTGAAAACGAACAT-GAAAAATG------GC-AA-TGGAG--CAATACTTT-G-AAAA-GGAA----C-TCT--TATTATGTCATGACTTGTGCGCCGACAG--ATAAT-GAAC---AAGTGTT-TGATTTTTG-TTT-A---TGTT-AATATTAAGAGA-TAACCA-TTTTAATGAA-AATTTGAC-A---C--AAGA-GTAAG-T-AC----AATG-A--TGCTAAA-TAAT-AGCAA-AAGAAATTTAATTC-ATT-TT-C--TTACAAATAAA----CGAATTATCAATCATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGTa
gi|7 : atagataaatgcagaaatTCGCATTCAAATTTATATC-AACGGAATTTGTGATGTTTTCTG-CC---TAAT-A-T-ACTAG--TTTTCA-AACGTAAAACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGATTTTTTT--TTTTCAATGTAA-CG-ACAACC-ACG-ACA-TTGTCGACGCA-CA-GATATAT-TAT-C-AAA-T-TTAGTG-TAGATCGTGGTTTGGCTCTAACTCA-GACAAA--TGGGAGATGGAACGG--A-C-A--TCA-GATCACAGGA-AT-GT---T-AGCAAAAT-ATGA-CATT--GAAAA-TA-----TTATTTATC-ATC---ATTACA-ATGCTC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGATTC-T-CG---------GA---------CTTC---GA-C------ACT-CA-CC-TTACTC-CC-TGGA----CGT-A----------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-AA----A---GGCCAGCTT-GAGGG-CGCAAACATTTTA--TTCGGAAGG--A-GATA---ATAGAGG--AGC-A---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTATGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGAGG-ACAATACTTT-G-AGAA-AGAA----T-TAT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGGTGAA-AATTTG-C-A---C--AA-A-GT-AG-TAAC---AAATG-A--TACTAAT-AGAT-ATCAA-AAGAAAGTTAATACAATT-TT-C--TTACAAATAAA----TGAATTATCAG-CATTGTCCACGA-CATTTTGGGA--CAACC-CTCGT
gi|8 : TGTCCCAAAAAGTC--GTGGGACAATGTACATAATTTCGC-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-AC--TT------A--ATAACTTTA-ACTT--ACATCAAAAACAAAA-GTGTAA-AATTTAAAACAA-TA-TCA-TATCAAATAAATGAGCTATTTCAG-ATTAAG-------------GGGTGCTC-TAT-G-AGAGCCATGTTGGCGCA-CGTACAAATATACGTGAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--GAAATG--A-TATAGCCTCA-T--AA---TAAATGTATCGCATTCAAATTTATATCAAACGGAATCTATGATGTTTTCTGTTT---TATT-A-C-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-AT--------TTTAA--AAACG-TCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACG-TTGTCGGCGCA-CA-GATAAAT-TAT-CAAAA-T-TT-GTG-TAGATCGTGGTTTGACTCCAACTCG-GAC-AAAACGAGAGCTGGAACGG--A-C-A--TCA-GATCATTGGA-A--ATGT-T-AGCAAAATAA-GA-CATT--G-AAA-TA-----TTATAAATC-ATC---A-TACA-ATGCCC---CTGCGCATACAT-CGGG-C-TGAAT-TA-GA-T-GT-AGAA-----AGGTTA-
gi|9 : GGAGATGGAACAA--G-C-A--TCA-AATCACAAAA-AT-GT---T-AGCAAAA-GATGA-CATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAAA-TA-TA-T-CT-AGAACTC-AGGGTTA-T-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTACTC-CC-CAG------AC-T----------T-A--------GC-ATTTTTGCATCAATTT---TGCAT-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGAAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-ACATTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AGGTGAT-GAAATTTTGTGTT-A---TGTT-TATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT-CATT-GAGCT-AAGAACGTTAATGCCATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGTggatctgttggtgttcggagggtcgccccactcctcacctgatctcc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36 ): AAAATCAAAAGCAAATGTGATCCACCATTTTT
Alignments
lowQualScore : 111111 2222222222222 1111 1 1 1 3333333 11 1 111111111 222222222 33333333333333333333333333333 222222222
lowQualScore : 55 7 3 3 3 3 3 4 4 4 111111 55 4 99 55 3 3 4 4 3 2 3 2222222222222 4 4 4 55 4 33 4 4 4 4 777 66 66 4 4 66 777 1 5 1 5 3333 4 777 88 4 5 1 5 66 5 66 888 5 5 5 8 5 5 5 5 999 5 5 0 5 0 2 55 1 3 3 44 3 3 44 3 3 1111111 3 77 3 44 7 3 88888 0 3 555 0 3 555 2 2 2 44 2 3 3 3 3 2 2 6 222222222 444444444 555 3 888888 3 3 3 777 55 6 88888888888888888888888888888 2 888 5 444 2 2 2 2 5555 2 1 2 5555 888 2 1 2 66 0 33 2 9999 44 3 555 55 0 88 3 3 3 3 3 88 3 3 3 0 3 3 3 6666 3 44 33 2 2 777 444 0 3 555 3 3 77 6 3 3 3 555 44 3 6 3 000000000 3 44 33 3 1 3 0 2 7 3 3 77 1 6666 4 4 66 2
lowQualScore : .. . . . . . . . . . ...... .. . .. .. . . . . . . . ............. . . . .. . .. . . . . ... .. .. . . .. ... . . . . .... . ... .. . . . . .. . .. ... . . . . . . . . ... . . . . . . .. . . . .. . . .. . . ....... . .. . .. . . ..... . . ... . . ... . . . .. . . . . . . . . ......... ......... ... . ...... . . . ... .. . ............................. . ... . ... . . . . .... . . . .... ... . . . .. . .. . .... .. . ... .. . .. . . . . . .. . . . . . . . .... . .. .. . . ... ... . . ... . . .. . . . . ... .. . . . ......... . .. .. . . . . . . . . .. . .... . . .. .
lowQualScore : 00 3 6 6 6 6 6 4 4 0 555555 55 0 55 55 6 6 0 0 9 7 6 0000000000000 0 0 0 55 0 99 4 4 4 4 888 11 11 4 4 11 888 7 0 0 0 6666 4 000 11 4 0 4 0 99 0 99 888 0 0 0 1 0 0 0 0 111 0 0 0 0 1 5 22 2 2 6 66 3 3 66 3 3 2222222 3 22 3 66 3 3 33333 0 1 444 5 1 444 9 9 9 33 9 1 1 1 1 9 9 2 333333333 666666666 444 1 888888 1 1 1 000 22 2 00000000000000000000000000000 9 333 3 777 7 7 7 7 7777 7 0 7 7777 999 9 2 9 88 9 99 9 5555 22 1 444 00 5 66 6 6 6 6 6 77 1 1 1 2 1 1 1 5555 1 22 99 9 9 444 888 6 1 444 1 1 33 2 1 1 1 444 22 1 2 1 444444444 1 22 55 1 5 1 2 2 4 3 3 99 0 5555 7 4 11 4
consensus : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--CTCCC-TAG-AC-T----------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
Reference ( family-3828 ) : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--CTCCC-TAG-AC-T----------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|1 : AGGGTTGTCCTAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAACATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATAAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCT-TTTAAAATAAATGAGTTATTTCAG-ATTAAG-------------GAGTACTC-TAT-G-AG--CCATGTTAGCGCA-TGGCTAAATATAAGTAAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--AAAAGG--A-CATACCTTCA-T--AA---TAGATAAATCGCACTCAAATTTATATC-AACGGAATTTATGATATTTTCTG-CC---TAAT-A-T-ACTAGG-TTTTCA-AGCCTAAGACGTCATCAATTGTAGAGAA-ATAACATCA-TTTT---AAACA-GCTCTGTAATGAATTTTTT--C---CAATCTAA-TG-GCAACC-AC-GACA-TTGTCTGCGCA-CA-GATATAT-TAT-C-AAATT-TT-GTG-TAGATCTTGGTTTGACTCCGACTCA-GAC-AAAACGAGAGCAGGAACGG--A-C-A--TCA-GATCACAGGA-A---TGT-T-AGAAAAAT-ATGA-CATT--GAAAA-TA-----TTACAAATC-ATC---ATTACG-AT-CCC---CTGCGGATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AGAACTC-TGGGTTA-T-CG---------AA---------CTTC---GA-C------ACC-CA-CG-TTA--CTCCC-TAG-AC-TTACATTTACATGTATAT-ATA------GC-ATC---GC-TCG-TTT---TGGCTAA-T-TTTCT-A----C-TTAT-GA----A---GGCCAGTTT-GA-GG-GGCAAACATTTGA--TTTAAAAGT--A-TATA---TTAGAGG--AGC-A---GTGAGGA--ATGTCAATGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTCTGTTT-G-AAATAT-GGGTTAAA-CAA-TAT-GAAAAATGCATCACGC-AT-CGGGG-ACAATGCTTT-A-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCTGACAG--AT-AT-GAACAA-AGGTGTT-TGATTTT--TTTT-A---TGTT-AATATTAAGTGA-AA--CA-TTTTGATGAA-CATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATA-A--TGCTAAT-AAAT-AGCAA-AAGAAAGTTGATATAATT-TT-C--AAACAAATAAA----TGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|10 : gTGGAACAA--AGC-A--TCA-AATCACAAAATA--GT---T-AGCAAAA-GATGA-CATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAA--TA-TA-T-CT-AGAAC-C-AGGGTTAAT-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTA---TCCC-CAG-AC-T----------------T-A--------GC-ATTTT-GCATCAATTT---TGA-T-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGGAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-A-GTTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AGGTGAT-GAAATTTTGGTTA-T---TTTT-AATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT--ATT-GAGCT-AAGAACGTTAATGC-ATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTT-GGA--CAACC-TTCGTa
gi|11 : gaAACGG--A-C-AAGTTA-GATCACAGAA-ACTGTA--T-AGCAAA--GATGAACATT--GAAAACTA-----TT--GAACC-ATCTTCATTACAGATGCCC---CTGTGCATACAT-C-GG-C-CAAAA-TA-GA-T-GT-AGAA-TC-GG--TTA-AACA---------GA---------CTTC---AA-C------ACC-C--------------------------------------------A------AC-AC---------GACTT---TGCCT-A-A-TTCC--A----C-TTTT-GA----AAC-GTTCAGCTT-GAGGG---TAAACATTTGA--TTTGGAAA---A-GAT----TTAGAGG--AGC-A---GTGAATATAATTTCAACTTGTCTCTGAATC-GGCGTGGTTTTTAAAAGTGTGTTT-G-ACAA-T-AGGTGAAA--GA-CAT--AAAAATGCATCGCGCCAT-CGGGGTACAGTACTTC-ATAAAA-AGAT----T-TCTTGGATAACGTCATG--TTGTGCGCCGACAG--AT-AT-GAACATGAAGTGTT-TTATTTTTGTTTTTA---TGTT-GAT--TAAGA-A-TA--CC-TTTTGATGAA-ATTTTG-T-A---C--AA-AAGT-AG-TAAC---AAATG-A--TGCTAAT-AAATCAGGAATAAGAAAAATAATACA-TT-TT-C--CAACAAATAAA----CGATTAATTAA-CATTGTCCACGA-CTTTTT-GGA--CAACCTCTCa
gi|12 : tt---GC-TCGATTT----GCCT-A-GGTTTCT-GAGGTCGTTATCGT----ATCCGGCCAGCTT-GAGGG-TGCACAAA-TTGT--TTTGGAGGG--ATGAGG---TGAGAGGGAGGT-A---GTGAGG
gi|12 : ATGTCATCAGTTGTGCGCCGACAGCAAT-AT-GA-CAT-AGGTCTT---ATTTATGTTTT-AATGTGTT-GATATTAA-AGA-TAA-CAATTTTGAT--A-AATTTG-TCA---CGAAA-A-GT-AGATAATCAAAAATGGA--TGCTAAT-CA-T-ACGAA-AAGAAAGTTAATACTATTCTT-C--TTAC-AATAAA----TGAggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgatgtcatcagttgtgcgccgacagcaatatgacataggtcttatttatgttttaatgtgttgatattaaagataacaattttgataaatttgtcacgaaaagtagataatcaaaaatggatgctaatcatacgaaaagaaagttaatactattcttcttacaataaatga
gi|13 : gctcgatttgcctaggtttctgaggtcgttatcgtatccggccagcttgagggtgcacaaattgttttggagggatgaggtgagagggaggtagtgaggggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CT-TTA--CTCAC-TAG-AC-T----------------T-ATATA----GC-ACC---GC-TCGATTT---TGCCT-A-T-ATTCT-A----C-TTTT-GA----A---GACCAGCTT-GAGGG-GGCAAACATTTAA--TTCGAAAGG--A-GATA---TTAGAGG--AGC-A---GTGAGGA--ATTTTAACTTGTCTCTGAATCAGGCGTGGATT--GTAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CCA-CAT-GAAAAATGTGTTGCGC-AT--GGGG-ACAATACTTT-G-AAAA-AGAA----C-TTT--GATAACGTCATAATATGTGCACCGACAG--AT-AT-GGACAT-AGGTGTT-TTATTTTTATGCT-A---TGCT-AATATCATGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-GG-TCAA---AAATG-A--TGTTAAT-AAAT-AAGAA-AAGAAAGTTGATACAATT-TT-T--TAACAAATAAATGATCGAATTATCAA-TATTGCTCACGA-CTTATTGGGA--CAACC-CTCG
gi|14 : TATTGATC-ATC---ATAATA-ATGCCTGGGCTGCGCATACAT-C-GA-C-TGAAA-CT-GA-T-CT-AGAATTC-GGAGTTA-T-CGAATTTCAAAGA---------CTTC---CA-C------ACC-CA-TC-TTA--TTCCC-T------T----------------T-------------------GC-TCCATTT---TGCCT-G-T-TTTCC-G----T-TTTT-GA----A---GGCCAACTT-GAGGG-GACATAAATTTGA--TCCGGTAGA--A-AAT
gi|15 : aaTAAGCTATTTCAG-ATTAAG-------------GAGAGTTC-TCT-C-AG--CCTTGTTGGCGCA-TGTACAAAGATAAGTTGAAATT-T------------ATT-GGG---TTAGAT--GAAAGGACA-TATAGCTTCA-T--AACTTTATATATATTT--TTTTAATGTATAT
gi|16 : ATTTGTGCGGCAAAAC--CT-AT-AA---T-AGATGTT-T---------TCT-A---TGTC-ATTATGAAAAAA--A--AA-TTTT--T------TTTT-T-AAATC--AC-A-GA-AG---------AACG-A--TACCATT-AGAT-AACAA-AAGAAAACGAA---AATT-TTTC--TAACCAATATA----TGAATGATTAA-CATTGTTGAGGA-CGCGTTAGGA--tttattttttttatttttataatatagctttattgggttag
gi|17 : AA-GTGTAA-AATCTAAAACAAATA-TCA-TATCTAATAAATGAGCTATTTAAT-ATTAAG-------------GGGTGCTT-TAT-G-AG--CCATATTGGCGCA-CGTACAAATATAGGTGAATATT-TTCGAT-GATCC-ATTGGGG---TTAGAT--GGAAAG--A-TATAGCCTCA-T--AA---TAGATATATCGCATaatctcata
gi|18 : -C-GA-C-CGAAA-TA-GA-T-CT-AGAACTC-GGAGTTA-T-TG---------GA---------TTTCAAAGA-CTTCCCTACC-CA-CG-TCA--CTCCT-CAG-AC-T----------------T-A-----------------GT-TACATTTGGCGGCCT-A-T-TTTCC-A----C-TTTT-AA----A-----------------G-AGCAAAAATTTGAT-TTTGGAAGA--A-GATATATATAGAGG--AGC-A---GC
gi|19 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTGATAATTTC-C-AAATTAC-------AGGC-CCAAAAGATA-TTTTA-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-CATTTAAAATAAATA-TCA-TAACATGTGAATGAGCTATTTCAG-
gi|2 : gAGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATGAGCTACTTTAG-ATTAAA-------------GAGTGTTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACATT-GTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACCAACGGACA-TTGTCGGCGCA-CA-TATAAAT-TAA-T-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTC--GACAAAAACGGG-GCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAAATAAAAA-AATT--GAAAA-TA-----TCATAAATC-ATC---ATTACC-ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GATC------ACC-CA-CC-TTA--ATCCCGTAGTAT-T----------------TAATA------GCAACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GAAGG-GGCAAACATTTGA--TTTTGAAGG--A-AATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGCGTGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT--AAAAATGCATCGCGC-AT-CGGGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-AT-GAAGTT-GGGCGTT-TGATTTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA-TTTTGATGAA-AATTGG-T-A---C--AA-A-GT-AG-TAAT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAACTTAATTCAATT-TT-C--TTACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTGGGGA--CAA-C-CTCGT
gi|20 : AGGGTTGTCCCAAAAAGTCTCGTGG-CCAACGTTCATAATTTC-C-AAACTACGC-AATCAGATTCCAAAAGATT-TTTTTTACA-TA------A--ATAACTTTA-ACTT--ACTTCAAA--CAAAA-GTGTAA-AATTTTAAAGAAATATTCA-T
gi|21 : AGGGTTGTCCCACGTACTC--GTAG-ACAATGTTGTTAGTTTT-CGAAATTA-GC-A-TCAAAT-CCATAGGA----TTTT-ACA-TGGAAAAAA--AAAACCTTATACTT--ATTCTAAA--CAAAA-AGGTAACAATTTGAAA
gi|22 : -TT------A--ATAACTTTA-ACTT--ACACCAAA--CAAAAAGTGTAA-AATTTAAAATAAAGA-TCT-TAACAAATAAATGAGCTATTACAG-ATGAAG-------------GAGTGCTC-TAT-C-AG--CCATGTTGGCATA-CGTACAAATATAtgggcataa
gi|23 : ACGC--G-C-A--TCA-GATCA---AA-A--ATG--TTAGGAAAA-GGTGG-CATT--GA----CA-----TTA-AAGTA-GTA---AT---A-ATGCCC---CTGTGCATACAT-C-GG-C-CGAAA-
gi|24 : AATGCATCGCGC-AT-CGGGG-AAAATACTTGAG-AAAA-AAAA----CCTCT--GATAACGCCATGATTTGTGCGCCGACAG--AT-AT-GAAg
gi|25 : AAGATTATCCCTAAAC-TT--GTGG-ACAATGTCAATAACTTC-A-AAAACGCGC-A-TCAGAT-CAAAA
gi|26 : cgCATCACGC-AT-CGGGG-ACAATAC-TT-G-AAAACAAAA----C-TCT--GATAACGTCATGATTTGTGCGC
gi|27 : aGGTTGTCCCAAAATGTT--GTGA-ACATTGTTAATGATTTT-C-AAAATATGC-C-TCAAAC-C
gi|28 : aTAAA----TGAATTAGCAA-CAGTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|29 : TTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|3 : ctaatAGGGTTGTCCAAAAAAGTC--GTGGGATAATATTAATAATTTC-C-AAACTACGCTA-TCAGAT-CCAAAAGATATTTTTT-ACA-TT------AATATAAC-TTA-ACTTAAACATTAAA--CATAA-GTGTAA-AATTTAAAATCAATA--CATTAT-AAAT-AATGAGCTATTTCAG-ATTAAAGCTGTTACGCTCTGGGTGCTC-TAT-GAAG--CCATCTTGGCGCA-CGTACAAATATAGG-GAACATT-TTCTAT-AATTCAATT-GGGGGTTTAGAT--GAACGG--A-TATAGCCTCA-TAAAA---TAAATATAATGCATTCAAATTTATATC-AACG--ATCTATGATGTTTTCTT-CGTTCTATTAA-TAACTAGT-TTTTC--AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCATTTTTA--AAACGTCCTCTGTAATGAATGTTTT--T---CAATGTAA-CGTGCAACC-ACGG-CAGTTGTCGGCGCA-CACGATAAAT-TATCC-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCACTCG-GAC-AAAACGAGAGCTGAAACGGCAG-C-A--TCA-GATCATTGGA-A---TGATT-AAAAAAATAATGA-CATT--G-AAA-TA-----TTAT--ATCTATC---ATTACA-ACGCCA---CTGCGCATAC-T-C-GG-CTTGAAATTACGA-TAGT-A-AACTCGGGGGTTA-T-C----------GA---------CTTC---GA-C------ACCGCACCC-TTA--CTACC--AG-CC-T----------------T-ATATTATAGGC-ACC---GC-TCGATTT---TG-CT-ATT-TTTCTAA----C-TTAT-GA----A---GGCCAGC-T-GAGGGTGGC-AACATTTGAAGTTTGGCGGG--A-T-CA---ATAGAGG--AGCAA---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTTA-GAAGGTGT-TTT-GAACAAATGGGGTGAAA-CGA-CATGGAAAAATGCATCGT-C-ATCCAGGG-AAAATAC-TT-G-AAAA-AAAAAACCC-CCA--TATAACGTCATGATTTGTGCGCCGACAG--AT-ATAAAACATAAGGTCTT-TAATTTTTGTTTT-A---TGTTAAATATTCAGAGAGTA--CATTTTTGATGGACAATTTG-T-A---C--AA-ACGT-AG-TAATA--AAATG-AACTGCTAATGAAAT-AGCAA-AAGAAAGTTAAT
gi|30 : gTTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|31 : ctaatAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGT
gi|32 : agct---TATT-A-T-ACTAAG-TTTTCA-AGCGCAAGACGTCATAAATGGCAG
gi|33 : tATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|34 : TA------GC-ATC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----
gi|35 : ATCNTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|37 : t-CATTGTCCACGA-CTTTTTTGGA--CAACC-CTTG
gi|4 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACAC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTTA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTTAG-ATCAAA-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTTTACATT-TTCTAT-AATCC-ATT-GGG---TTAGGT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCAAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAGA-CTTTAATGGCGTAAGACGTCATAAATGGCAGAGAA-ATTATGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-GATAAAT-TAT-A-AAA-TGTT-GTG-TAGATCGTGTTTGGACTCCCGCTTG-G--AAAAACGGGGGCTGGAATGG--A-C-A--TCA-TGTCACAGGA-A---TGT-T-AGCAAAAT-ATAA-AATT--G-AAA-TA-----TTAT-AATC-ATC---ATTACA-ATG-CC---CTGCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-TG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--ATCCC-TAG-ACTT----------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCTT-GAAGG-GGCAAACATTTGA--TTTGGAAGG--A-GATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAA-ATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CA--AAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-ATAA-GGAA----C-TCT--GATAACGTCATGGTTTGTGCGCCGACAG--AT-AT-GAACAT-GGGCG-T-TGATTTTTGTTTT-A---TGCT-AATATTAAGAGA-TA--CA--TTTGATG-A-AATTTG-T-A---C--AA-A-GT-AG-T-AT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAATTTAATT-AATT-TT-CT-TAACAAATAAA----CGAATTATCAGCCATGATCCACGA-CTTTTGGGGA--CAACC-CTCGT
gi|5 : cgGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAAAT-CCAAAAGATA--TTTT-ACATTT------A--ATAACTTTA-ACTTA-ACA-CAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATGA-CTACTTTA--ATTAAA-------------GAGTGTTCTTAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACA-T-GTCTAT-AATCC-A-T-GGG---TT-GAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAA-TTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A---ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-TATAAAT-TAA-T-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACGAAAAAGGG-GCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAAATAAAAA-AATT--G-AAA-TA-----TCATAAATC-ATC---ATTAC--ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GTAAAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GA-T------ACC-CA-CC-TTA--ATCCC-TAGTACTT----------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GA-AG-GGCAAACATTTGA--TTTTGAAGG--A--ATAC--ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT---AAAATGCATCGCGC-AT-C-GGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-A--GAGT-T-GGGCGTTATGA-TTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA--TTTGATGAA-AATTGG-T-A---C--AA-A-GT-AA-TGA----AAATG-A--TGCTAAT-AAAT-GGTAA----GAACTTAATTC-ATT-TT-CCTTCACAAA-ATA----CGAATTATCAA-CATTGTCCACGA--TTTTGGGGA--CAA-C-CTCGT
gi|6 : TTTCAGCATTAAG-------------GAGTGCTC-TATTG-AG--CCATGTTGGCGCAACGTGCAAATATAAGT-TACATTCTTCTACGAATTC-ATT-GGG---TTAGATTGGAAAGG--AATATAGCTTCAAT--AA---AAGATACAATGCATT-GACTTT-TATC-AACGGAATCTATGATGTTTCTAG-CAC--TATT-AAT-ACTGGGGTTTTCA-AGCATAAGACGTCATAA--GGCAGAGAACATGACGTCA-TTTTATAAAACG-GCTCTGTAA-GAATGTTTTCTT---CA-TGTAAGCG-GCAACC-AACGACA-TTGTCGGCGCAGCG-TATAAATATAC-T-AAA-T-TTTGTGGTAGATCGTGGTT-GATTCCAGCTCGAGACAAA--CGGGAGCTGGAACGG--A-CCA--TCAAGATCACAGGA-AT-GTT--T-AGCTAAAT-ATGA-TATTTTGAAAA-TACTTGATTAT-AATC-ATC---AGTACA-ATGCCA---CTGCGCATACATTC-GAAC-TGAAA-TA-GAAT-GT-AGAACTC-GGGGTTA-TTCG---------GA---------TTTC---GA-C------ACC-CA-CCCTTAATCTCCT-AAG-AC-T----------------T-ATATAT---GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TGTT-GACTCGA---AGCCAGCTTTGAGGG-GGTAAACATTTGA--TTGTGAAGGGGA-GATA---TAAGAGG--AGC-ACGTGCGAGA-----TTCA-CATGTTTCTGAATCAGGCGTGGTTT--GAGGATGTGCTTCG-ACAAAT-GGGTGAAAACGAACAT-GAAAAATG------GC-AA-TGGAG--CAATACTTT-G-AAAA-GGAA----C-TCT--TATTATGTCATGACTTGTGCGCCGACAG--ATAAT-GAAC---AAGTGTT-TGATTTTTG-TTT-A---TGTT-AATATTAAGAGA-TAACCA-TTTTAATGAA-AATTTGAC-A---C--AAGA-GTAAG-T-AC----AATG-A--TGCTAAA-TAAT-AGCAA-AAGAAATTTAATTC-ATT-TT-C--TTACAAATAAA----CGAATTATCAATCATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGTa
gi|7 : atagataaatgcagaaatTCGCATTCAAATTTATATC-AACGGAATTTGTGATGTTTTCTG-CC---TAAT-A-T-ACTAG--TTTTCA-AACGTAAAACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGATTTTTTT--TTTTCAATGTAA-CG-ACAACC-ACG-ACA-TTGTCGACGCA-CA-GATATAT-TAT-C-AAA-T-TTAGTG-TAGATCGTGGTTTGGCTCTAACTCA-GACAAA--TGGGAGATGGAACGG--A-C-A--TCA-GATCACAGGA-AT-GT---T-AGCAAAAT-ATGA-CATT--GAAAA-TA-----TTATTTATC-ATC---ATTACA-ATGCTC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGATTC-T-CG---------GA---------CTTC---GA-C------ACT-CA-CC-TTA--CTCCC-TGG-ACGTA---------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-AA----A---GGCCAGCTT-GAGGG-CGCAAACATTTTA--TTCGGAAGG--A-GATA---ATAGAGG--AGC-A---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTATGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGAGG-ACAATACTTT-G-AGAA-AGAA----T-TAT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGGTGAA-AATTTG-C-A---C--AA-A-GT-AG-TAAC---AAATG-A--TACTAAT-AGAT-ATCAA-AAGAAAGTTAATACAATT-TT-C--TTACAAATAAA----TGAATTATCAG-CATTGTCCACGA-CATTTTGGGA--CAACC-CTCGT
gi|8 : TGTCCCAAAAAGTC--GTGGGACAATGTACATAATTTCGC-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-AC--TT------A--ATAACTTTA-ACTT--ACATCAAAAACAAAA-GTGTAA-AATTTAAAACAA-TA-TCA-TATCAAATAAATGAGCTATTTCAG-ATTAAG-------------GGGTGCTC-TAT-G-AGAGCCATGTTGGCGCA-CGTACAAATATACGTGAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--GAAATG--A-TATAGCCTCA-T--AA---TAAATGTATCGCATTCAAATTTATATCAAACGGAATCTATGATGTTTTCTGTTT---TATT-A-C-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-AT--------TTTAA--AAACG-TCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACG-TTGTCGGCGCA-CA-GATAAAT-TAT-CAAAA-T-TT-GTG-TAGATCGTGGTTTGACTCCAACTCG-GAC-AAAACGAGAGCTGGAACGG--A-C-A--TCA-GATCATTGGA-A--ATGT-T-AGCAAAATAA-GA-CATT--G-AAA-TA-----TTATAAATC-ATC---A-TACA-ATGCCC---CTGCGCATACAT-CGGG-C-TGAAT-TA-GA-T-GT-AGAA-----AGGTTA-
gi|9 : GGAGATGGAACAA--G-C-A--TCA-AATCACAAAA-AT-GT---T-AGCAAAA-GATGA-CATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAAA-TA-TA-T-CT-AGAACTC-AGGGTTA-T-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTA--CTCCC-CAG-AC-T----------------T-A--------GC-ATTTTTGCATCAATTT---TGCAT-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGAAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-ACATTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AGGTGAT-GAAATTTTGTGTT-A---TGTT-TATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT-CATT-GAGCT-AAGAACGTTAATGCCATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGTggatctgttggtgttcggagggtcgccccactcctcacctgatctcc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36 ): AAAATCAAAAGCAAATGTGATCCACCATTTTT
Alignments
lowQualScore : 111111 2222222222222 1111 1 1 1 3333333 11 1 111111111 222222222 33333333333333333333333333333 222222222
lowQualScore : 55 7 3 3 3 3 3 4 4 4 111111 55 4 99 55 3 3 4 4 3 2 3 2222222222222 4 4 4 55 4 33 4 4 4 4 777 66 66 4 4 66 777 1 5 1 5 3333 4 777 88 4 5 1 5 66 5 66 888 5 5 5 8 5 5 5 5 999 5 5 0 5 0 2 55 1 3 3 44 3 3 44 3 3 1111111 3 77 3 44 7 3 88888 0 3 555 0 3 555 2 2 2 44 2 3 3 3 3 2 2 6 222222222 444444444 555 3 888888 3 3 3 777 55 6 88888888888888888888888888888 2 888 5 444 2 2 2 2 5555 2 1 2 5555 888 2 1 2 66 0 33 2 9999 44 3 555 55 0 88 3 3 3 3 3 88 3 3 3 0 3 3 3 6666 3 44 33 2 2 777 444 0 3 555 3 3 77 6 3 3 3 555 44 3 6 3 000000000 3 44 33 3 1 3 0 2 7 3 3 77 1 6666 4 4 66 2
lowQualScore : .. . . . . . . . . . ...... .. . .. .. . . . . . . . ............. . . . .. . .. . . . . ... .. .. . . .. ... . . . . .... . ... .. . . . . .. . .. ... . . . . . . . . ... . . . . . . .. . . . .. . . .. . . ....... . .. . .. . . ..... . . ... . . ... . . . .. . . . . . . . . ......... ......... ... . ...... . . . ... .. . ............................. . ... . ... . . . . .... . . . .... ... . . . .. . .. . .... .. . ... .. . .. . . . . . .. . . . . . . . .... . .. .. . . ... ... . . ... . . .. . . . . ... .. . . . ......... . .. .. . . . . . . . . .. . .... . . .. .
lowQualScore : 00 3 6 6 6 6 6 4 4 0 555555 55 0 55 55 6 6 0 0 9 7 6 0000000000000 0 0 0 55 0 99 4 4 4 4 888 11 11 4 4 11 888 7 0 0 0 6666 4 000 11 4 0 4 0 99 0 99 888 0 0 0 1 0 0 0 0 111 0 0 0 0 1 5 22 2 2 6 66 3 3 66 3 3 2222222 3 22 3 66 3 3 33333 0 1 444 5 1 444 9 9 9 33 9 1 1 1 1 9 9 2 333333333 666666666 444 1 888888 1 1 1 000 22 2 00000000000000000000000000000 9 333 3 777 7 7 7 7 7777 7 0 7 7777 999 9 2 9 88 9 99 9 5555 22 1 444 00 5 66 6 6 6 6 6 77 1 1 1 2 1 1 1 5555 1 22 99 9 9 444 888 6 1 444 1 1 33 2 1 1 1 444 22 1 2 1 444444444 1 22 55 1 5 1 2 2 4 3 3 99 0 5555 7 4 11 4
consensus : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--CTCCC-TAG-AC-T----------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
Reference ( family-3828 ) : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--CTCCC-TAG-AC-T----------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|1 : AGGGTTGTCCTAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAACATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATAAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCT-TTTAAAATAAATGAGTTATTTCAG-ATTAAG-------------GAGTACTC-TAT-G-AG--CCATGTTAGCGCA-TGGCTAAATATAAGTAAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--AAAAGG--A-CATACCTTCA-T--AA---TAGATAAATCGCACTCAAATTTATATC-AACGGAATTTATGATATTTTCTG-CC---TAAT-A-T-ACTAGG-TTTTCA-AGCCTAAGACGTCATCAATTGTAGAGAA-ATAACATCA-TTTT---AAACA-GCTCTGTAATGAATTTTTT--C---CAATCTAA-TG-GCAACC-AC-GACA-TTGTCTGCGCA-CA-GATATAT-TAT-C-AAATT-TT-GTG-TAGATCTTGGTTTGACTCCGACTCA-GAC-AAAACGAGAGCAGGAACGG--A-C-A--TCA-GATCACAGGA-A---TGT-T-AGAAAAAT-ATGA-CATT--GAAAA-TA-----TTACAAATC-ATC---ATTACG-AT-CCC---CTGCGGATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AGAACTC-TGGGTTA-T-CG---------AA---------CTTC---GA-C------ACC-CA-CG-TTA--CTCCC-TAG-AC-TTACATTTACATGTATAT-ATA------GC-ATC---GC-TCG-TTT---TGGCTAA-T-TTTCT-A----C-TTAT-GA----A---GGCCAGTTT-GA-GG-GGCAAACATTTGA--TTTAAAAGT--A-TATA---TTAGAGG--AGC-A---GTGAGGA--ATGTCAATGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTCTGTTT-G-AAATAT-GGGTTAAA-CAA-TAT-GAAAAATGCATCACGC-AT-CGGGG-ACAATGCTTT-A-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCTGACAG--AT-AT-GAACAA-AGGTGTT-TGATTTT--TTTT-A---TGTT-AATATTAAGTGA-AA--CA-TTTTGATGAA-CATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATA-A--TGCTAAT-AAAT-AGCAA-AAGAAAGTTGATATAATT-TT-C--AAACAAATAAA----TGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|10 : gTGGAACAA--AGC-A--TCA-AATCACAAAATA--GT---T-AGCAAAA-GATGA-CATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAA--TA-TA-T-CT-AGAAC-C-AGGGTTAAT-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTA---TCCC-CAG-AC-T----------------T-A--------GC-ATTTT-GCATCAATTT---TGA-T-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGGAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-A-GTTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AGGTGAT-GAAATTTTGGTTA-T---TTTT-AATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT--ATT-GAGCT-AAGAACGTTAATGC-ATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTT-GGA--CAACC-TTCGTa
gi|11 : gaAACGG--A-C-AAGTTA-GATCACAGAA-ACTGTA--T-AGCAAA--GATGAACATT--GAAAACTA-----TT--GAACC-ATCTTCATTACAGATGCCC---CTGTGCATACAT-C-GG-C-CAAAA-TA-GA-T-GT-AGAA-TC-GG--TTA-AACA---------GA---------CTTC---AA-C------ACC-C--------------------------------------------A------AC-AC---------GACTT---TGCCT-A-A-TTCC--A----C-TTTT-GA----AAC-GTTCAGCTT-GAGGG---TAAACATTTGA--TTTGGAAA---A-GAT----TTAGAGG--AGC-A---GTGAATATAATTTCAACTTGTCTCTGAATC-GGCGTGGTTTTTAAAAGTGTGTTT-G-ACAA-T-AGGTGAAA--GA-CAT--AAAAATGCATCGCGCCAT-CGGGGTACAGTACTTC-ATAAAA-AGAT----T-TCTTGGATAACGTCATG--TTGTGCGCCGACAG--AT-AT-GAACATGAAGTGTT-TTATTTTTGTTTTTA---TGTT-GAT--TAAGA-A-TA--CC-TTTTGATGAA-ATTTTG-T-A---C--AA-AAGT-AG-TAAC---AAATG-A--TGCTAAT-AAATCAGGAATAAGAAAAATAATACA-TT-TT-C--CAACAAATAAA----CGATTAATTAA-CATTGTCCACGA-CTTTTT-GGA--CAACCTCTCa
gi|12 : tt---GC-TCGATTT----GCCT-A-GGTTTCT-GAGGTCGTTATCGT----ATCCGGCCAGCTT-GAGGG-TGCACAAA-TTGT--TTTGGAGGG--ATGAGG---TGAGAGGGAGGT-A---GTGAGG
gi|12 : ATGTCATCAGTTGTGCGCCGACAGCAAT-AT-GA-CAT-AGGTCTT---ATTTATGTTTT-AATGTGTT-GATATTAA-AGA-TAA-CAATTTTGAT--A-AATTTG-TCA---CGAAA-A-GT-AGATAATCAAAAATGGA--TGCTAAT-CA-T-ACGAA-AAGAAAGTTAATACTATTCTT-C--TTAC-AATAAA----TGAggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgatgtcatcagttgtgcgccgacagcaatatgacataggtcttatttatgttttaatgtgttgatattaaagataacaattttgataaatttgtcacgaaaagtagataatcaaaaatggatgctaatcatacgaaaagaaagttaatactattcttcttacaataaatga
gi|13 : gctcgatttgcctaggtttctgaggtcgttatcgtatccggccagcttgagggtgcacaaattgttttggagggatgaggtgagagggaggtagtgaggggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CT-TTA--CTCAC-TAG-AC-T----------------T-ATATA----GC-ACC---GC-TCGATTT---TGCCT-A-T-ATTCT-A----C-TTTT-GA----A---GACCAGCTT-GAGGG-GGCAAACATTTAA--TTCGAAAGG--A-GATA---TTAGAGG--AGC-A---GTGAGGA--ATTTTAACTTGTCTCTGAATCAGGCGTGGATT--GTAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CCA-CAT-GAAAAATGTGTTGCGC-AT--GGGG-ACAATACTTT-G-AAAA-AGAA----C-TTT--GATAACGTCATAATATGTGCACCGACAG--AT-AT-GGACAT-AGGTGTT-TTATTTTTATGCT-A---TGCT-AATATCATGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-GG-TCAA---AAATG-A--TGTTAAT-AAAT-AAGAA-AAGAAAGTTGATACAATT-TT-T--TAACAAATAAATGATCGAATTATCAA-TATTGCTCACGA-CTTATTGGGA--CAACC-CTCG
gi|14 : TATTGATC-ATC---ATAATA-ATGCCTGGGCTGCGCATACAT-C-GA-C-TGAAA-CT-GA-T-CT-AGAATTC-GGAGTTA-T-CGAATTTCAAAGA---------CTTC---CA-C------ACC-CA-TC-TTA--TTCCC-T------T----------------T-------------------GC-TCCATTT---TGCCT-G-T-TTTCC-G----T-TTTT-GA----A---GGCCAACTT-GAGGG-GACATAAATTTGA--TCCGGTAGA--A-AAT
gi|15 : aaTAAGCTATTTCAG-ATTAAG-------------GAGAGTTC-TCT-C-AG--CCTTGTTGGCGCA-TGTACAAAGATAAGTTGAAATT-T------------ATT-GGG---TTAGAT--GAAAGGACA-TATAGCTTCA-T--AACTTTATATATATTT--TTTTAATGTATAT
gi|16 : ATTTGTGCGGCAAAAC--CT-AT-AA---T-AGATGTT-T---------TCT-A---TGTC-ATTATGAAAAAA--A--AA-TTTT--T------TTTT-T-AAATC--AC-A-GA-AG---------AACG-A--TACCATT-AGAT-AACAA-AAGAAAACGAA---AATT-TTTC--TAACCAATATA----TGAATGATTAA-CATTGTTGAGGA-CGCGTTAGGA--tttattttttttatttttataatatagctttattgggttag
gi|17 : AA-GTGTAA-AATCTAAAACAAATA-TCA-TATCTAATAAATGAGCTATTTAAT-ATTAAG-------------GGGTGCTT-TAT-G-AG--CCATATTGGCGCA-CGTACAAATATAGGTGAATATT-TTCGAT-GATCC-ATTGGGG---TTAGAT--GGAAAG--A-TATAGCCTCA-T--AA---TAGATATATCGCATaatctcata
gi|18 : -C-GA-C-CGAAA-TA-GA-T-CT-AGAACTC-GGAGTTA-T-TG---------GA---------TTTCAAAGA-CTTCCCTACC-CA-CG-TCA--CTCCT-CAG-AC-T----------------T-A-----------------GT-TACATTTGGCGGCCT-A-T-TTTCC-A----C-TTTT-AA----A-----------------G-AGCAAAAATTTGAT-TTTGGAAGA--A-GATATATATAGAGG--AGC-A---GC
gi|19 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTGATAATTTC-C-AAATTAC-------AGGC-CCAAAAGATA-TTTTA-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-CATTTAAAATAAATA-TCA-TAACATGTGAATGAGCTATTTCAG-
gi|2 : gAGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATGAGCTACTTTAG-ATTAAA-------------GAGTGTTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACATT-GTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACCAACGGACA-TTGTCGGCGCA-CA-TATAAAT-TAA-T-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTC--GACAAAAACGGG-GCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAAATAAAAA-AATT--GAAAA-TA-----TCATAAATC-ATC---ATTACC-ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GATC------ACC-CA-CC-TTA--ATCCCGTAGTAT-T----------------TAATA------GCAACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GAAGG-GGCAAACATTTGA--TTTTGAAGG--A-AATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGCGTGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT--AAAAATGCATCGCGC-AT-CGGGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-AT-GAAGTT-GGGCGTT-TGATTTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA-TTTTGATGAA-AATTGG-T-A---C--AA-A-GT-AG-TAAT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAACTTAATTCAATT-TT-C--TTACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTGGGGA--CAA-C-CTCGT
gi|20 : AGGGTTGTCCCAAAAAGTCTCGTGG-CCAACGTTCATAATTTC-C-AAACTACGC-AATCAGATTCCAAAAGATT-TTTTTTACA-TA------A--ATAACTTTA-ACTT--ACTTCAAA--CAAAA-GTGTAA-AATTTTAAAGAAATATTCA-T
gi|21 : AGGGTTGTCCCACGTACTC--GTAG-ACAATGTTGTTAGTTTT-CGAAATTA-GC-A-TCAAAT-CCATAGGA----TTTT-ACA-TGGAAAAAA--AAAACCTTATACTT--ATTCTAAA--CAAAA-AGGTAACAATTTGAAA
gi|22 : -TT------A--ATAACTTTA-ACTT--ACACCAAA--CAAAAAGTGTAA-AATTTAAAATAAAGA-TCT-TAACAAATAAATGAGCTATTACAG-ATGAAG-------------GAGTGCTC-TAT-C-AG--CCATGTTGGCATA-CGTACAAATATAtgggcataa
gi|23 : ACGC--G-C-A--TCA-GATCA---AA-A--ATG--TTAGGAAAA-GGTGG-CATT--GA----CA-----TTA-AAGTA-GTA---AT---A-ATGCCC---CTGTGCATACAT-C-GG-C-CGAAA-
gi|24 : AATGCATCGCGC-AT-CGGGG-AAAATACTTGAG-AAAA-AAAA----CCTCT--GATAACGCCATGATTTGTGCGCCGACAG--AT-AT-GAAg
gi|25 : AAGATTATCCCTAAAC-TT--GTGG-ACAATGTCAATAACTTC-A-AAAACGCGC-A-TCAGAT-CAAAA
gi|26 : cgCATCACGC-AT-CGGGG-ACAATAC-TT-G-AAAACAAAA----C-TCT--GATAACGTCATGATTTGTGCGC
gi|27 : aGGTTGTCCCAAAATGTT--GTGA-ACATTGTTAATGATTTT-C-AAAATATGC-C-TCAAAC-C
gi|28 : aTAAA----TGAATTAGCAA-CAGTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|29 : TTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|3 : ctaatAGGGTTGTCCAAAAAAGTC--GTGGGATAATATTAATAATTTC-C-AAACTACGCTA-TCAGAT-CCAAAAGATATTTTTT-ACA-TT------AATATAAC-TTA-ACTTAAACATTAAA--CATAA-GTGTAA-AATTTAAAATCAATA--CATTAT-AAAT-AATGAGCTATTTCAG-ATTAAAGCTGTTACGCTCTGGGTGCTC-TAT-GAAG--CCATCTTGGCGCA-CGTACAAATATAGG-GAACATT-TTCTAT-AATTCAATT-GGGGGTTTAGAT--GAACGG--A-TATAGCCTCA-TAAAA---TAAATATAATGCATTCAAATTTATATC-AACG--ATCTATGATGTTTTCTT-CGTTCTATTAA-TAACTAGT-TTTTC--AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCATTTTTA--AAACGTCCTCTGTAATGAATGTTTT--T---CAATGTAA-CGTGCAACC-ACGG-CAGTTGTCGGCGCA-CACGATAAAT-TATCC-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCACTCG-GAC-AAAACGAGAGCTGAAACGGCAG-C-A--TCA-GATCATTGGA-A---TGATT-AAAAAAATAATGA-CATT--G-AAA-TA-----TTAT--ATCTATC---ATTACA-ACGCCA---CTGCGCATAC-T-C-GG-CTTGAAATTACGA-TAGT-A-AACTCGGGGGTTA-T-C----------GA---------CTTC---GA-C------ACCGCACCC-TTA--CTACC--AG-CC-T----------------T-ATATTATAGGC-ACC---GC-TCGATTT---TG-CT-ATT-TTTCTAA----C-TTAT-GA----A---GGCCAGC-T-GAGGGTGGC-AACATTTGAAGTTTGGCGGG--A-T-CA---ATAGAGG--AGCAA---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTTA-GAAGGTGT-TTT-GAACAAATGGGGTGAAA-CGA-CATGGAAAAATGCATCGT-C-ATCCAGGG-AAAATAC-TT-G-AAAA-AAAAAACCC-CCA--TATAACGTCATGATTTGTGCGCCGACAG--AT-ATAAAACATAAGGTCTT-TAATTTTTGTTTT-A---TGTTAAATATTCAGAGAGTA--CATTTTTGATGGACAATTTG-T-A---C--AA-ACGT-AG-TAATA--AAATG-AACTGCTAATGAAAT-AGCAA-AAGAAAGTTAAT
gi|30 : gTTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|31 : ctaatAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGT
gi|32 : agct---TATT-A-T-ACTAAG-TTTTCA-AGCGCAAGACGTCATAAATGGCAG
gi|33 : tATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|34 : TA------GC-ATC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----
gi|35 : ATCNTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|37 : t-CATTGTCCACGA-CTTTTTTGGA--CAACC-CTTG
gi|4 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACAC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTTA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTTAG-ATCAAA-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTTTACATT-TTCTAT-AATCC-ATT-GGG---TTAGGT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCAAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAGA-CTTTAATGGCGTAAGACGTCATAAATGGCAGAGAA-ATTATGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-GATAAAT-TAT-A-AAA-TGTT-GTG-TAGATCGTGTTTGGACTCCCGCTTG-G--AAAAACGGGGGCTGGAATGG--A-C-A--TCA-TGTCACAGGA-A---TGT-T-AGCAAAAT-ATAA-AATT--G-AAA-TA-----TTAT-AATC-ATC---ATTACA-ATG-CC---CTGCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-TG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--ATCCC-TAG-ACTT----------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCTT-GAAGG-GGCAAACATTTGA--TTTGGAAGG--A-GATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAA-ATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CA--AAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-ATAA-GGAA----C-TCT--GATAACGTCATGGTTTGTGCGCCGACAG--AT-AT-GAACAT-GGGCG-T-TGATTTTTGTTTT-A---TGCT-AATATTAAGAGA-TA--CA--TTTGATG-A-AATTTG-T-A---C--AA-A-GT-AG-T-AT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAATTTAATT-AATT-TT-CT-TAACAAATAAA----CGAATTATCAGCCATGATCCACGA-CTTTTGGGGA--CAACC-CTCGT
gi|5 : cgGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAAAT-CCAAAAGATA--TTTT-ACATTT------A--ATAACTTTA-ACTTA-ACA-CAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATGA-CTACTTTA--ATTAAA-------------GAGTGTTCTTAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACA-T-GTCTAT-AATCC-A-T-GGG---TT-GAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAA-TTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A---ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-TATAAAT-TAA-T-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACGAAAAAGGG-GCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAAATAAAAA-AATT--G-AAA-TA-----TCATAAATC-ATC---ATTAC--ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GTAAAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GA-T------ACC-CA-CC-TTA--ATCCC-TAGTACTT----------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GA-AG-GGCAAACATTTGA--TTTTGAAGG--A--ATAC--ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT---AAAATGCATCGCGC-AT-C-GGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-A--GAGT-T-GGGCGTTATGA-TTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA--TTTGATGAA-AATTGG-T-A---C--AA-A-GT-AA-TGA----AAATG-A--TGCTAAT-AAAT-GGTAA----GAACTTAATTC-ATT-TT-CCTTCACAAA-ATA----CGAATTATCAA-CATTGTCCACGA--TTTTGGGGA--CAA-C-CTCGT
gi|6 : TTTCAGCATTAAG-------------GAGTGCTC-TATTG-AG--CCATGTTGGCGCAACGTGCAAATATAAGT-TACATTCTTCTACGAATTC-ATT-GGG---TTAGATTGGAAAGG--AATATAGCTTCAAT--AA---AAGATACAATGCATT-GACTTT-TATC-AACGGAATCTATGATGTTTCTAG-CAC--TATT-AAT-ACTGGGGTTTTCA-AGCATAAGACGTCATAA--GGCAGAGAACATGACGTCA-TTTTATAAAACG-GCTCTGTAA-GAATGTTTTCTT---CA-TGTAAGCG-GCAACC-AACGACA-TTGTCGGCGCAGCG-TATAAATATAC-T-AAA-T-TTTGTGGTAGATCGTGGTT-GATTCCAGCTCGAGACAAA--CGGGAGCTGGAACGG--A-CCA--TCAAGATCACAGGA-AT-GTT--T-AGCTAAAT-ATGA-TATTTTGAAAA-TACTTGATTAT-AATC-ATC---AGTACA-ATGCCA---CTGCGCATACATTC-GAAC-TGAAA-TA-GAAT-GT-AGAACTC-GGGGTTA-TTCG---------GA---------TTTC---GA-C------ACC-CA-CCCTTAATCTCCT-AAG-AC-T----------------T-ATATAT---GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TGTT-GACTCGA---AGCCAGCTTTGAGGG-GGTAAACATTTGA--TTGTGAAGGGGA-GATA---TAAGAGG--AGC-ACGTGCGAGA-----TTCA-CATGTTTCTGAATCAGGCGTGGTTT--GAGGATGTGCTTCG-ACAAAT-GGGTGAAAACGAACAT-GAAAAATG------GC-AA-TGGAG--CAATACTTT-G-AAAA-GGAA----C-TCT--TATTATGTCATGACTTGTGCGCCGACAG--ATAAT-GAAC---AAGTGTT-TGATTTTTG-TTT-A---TGTT-AATATTAAGAGA-TAACCA-TTTTAATGAA-AATTTGAC-A---C--AAGA-GTAAG-T-AC----AATG-A--TGCTAAA-TAAT-AGCAA-AAGAAATTTAATTC-ATT-TT-C--TTACAAATAAA----CGAATTATCAATCATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGTa
gi|7 : atagataaatgcagaaatTCGCATTCAAATTTATATC-AACGGAATTTGTGATGTTTTCTG-CC---TAAT-A-T-ACTAG--TTTTCA-AACGTAAAACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGATTTTTTT--TTTTCAATGTAA-CG-ACAACC-ACG-ACA-TTGTCGACGCA-CA-GATATAT-TAT-C-AAA-T-TTAGTG-TAGATCGTGGTTTGGCTCTAACTCA-GACAAA--TGGGAGATGGAACGG--A-C-A--TCA-GATCACAGGA-AT-GT---T-AGCAAAAT-ATGA-CATT--GAAAA-TA-----TTATTTATC-ATC---ATTACA-ATGCTC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGATTC-T-CG---------GA---------CTTC---GA-C------ACT-CA-CC-TTA--CTCCC-TGG-ACGTA---------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-AA----A---GGCCAGCTT-GAGGG-CGCAAACATTTTA--TTCGGAAGG--A-GATA---ATAGAGG--AGC-A---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTATGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGAGG-ACAATACTTT-G-AGAA-AGAA----T-TAT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGGTGAA-AATTTG-C-A---C--AA-A-GT-AG-TAAC---AAATG-A--TACTAAT-AGAT-ATCAA-AAGAAAGTTAATACAATT-TT-C--TTACAAATAAA----TGAATTATCAG-CATTGTCCACGA-CATTTTGGGA--CAACC-CTCGT
gi|8 : TGTCCCAAAAAGTC--GTGGGACAATGTACATAATTTCGC-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-AC--TT------A--ATAACTTTA-ACTT--ACATCAAAAACAAAA-GTGTAA-AATTTAAAACAA-TA-TCA-TATCAAATAAATGAGCTATTTCAG-ATTAAG-------------GGGTGCTC-TAT-G-AGAGCCATGTTGGCGCA-CGTACAAATATACGTGAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--GAAATG--A-TATAGCCTCA-T--AA---TAAATGTATCGCATTCAAATTTATATCAAACGGAATCTATGATGTTTTCTGTTT---TATT-A-C-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-AT--------TTTAA--AAACG-TCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACG-TTGTCGGCGCA-CA-GATAAAT-TAT-CAAAA-T-TT-GTG-TAGATCGTGGTTTGACTCCAACTCG-GAC-AAAACGAGAGCTGGAACGG--A-C-A--TCA-GATCATTGGA-A--ATGT-T-AGCAAAATAA-GA-CATT--G-AAA-TA-----TTATAAATC-ATC---A-TACA-ATGCCC---CTGCGCATACAT-CGGG-C-TGAAT-TA-GA-T-GT-AGAA-----AGGTTA-
gi|9 : GGAGATGGAACAA--G-C-A--TCA-AATCACAAAA-AT-GT---T-AGCAAAA-GATGA-CATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAAA-TA-TA-T-CT-AGAACTC-AGGGTTA-T-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTA--CTCCC-CAG-AC-T----------------T-A--------GC-ATTTTTGCATCAATTT---TGCAT-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGAAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-ACATTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AGGTGAT-GAAATTTTGTGTT-A---TGTT-TATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT-CATT-GAGCT-AAGAACGTTAATGCCATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGTggatctgttggtgttcggagggtcgccccactcctcacctgatctcc
blockSeqs : TC G G G T A T T T T GAAAAA AT T AA AA A C T T C A C GCTGTTACGCTCT T T A AG A TG C G A G GGT TG AC A A AA CTT T A A T GTTC A TA GG T C G T TA T CT TTT G T A G G G C A CC . G T G C GA A A A CA G C AG A T CTGTA T TA A TT A C CTTGA T T TTC G GGG T G A TT T C A A A G A A AATTTCAAA TGTCAACGA AAA T TTCCCT G C C ATC GT T TTATATTATAG A TTT A GGC . T G A AGGT G T C CTCG TCC T G T AG GG T TATA GA A CGT TA TT C A G A A GG C C T A T C AACC C TG CA A A ATG ATG T ATG A G AC A C A C AAT GA G A A ATAATCAAA G AC GA C G T G A C T CT G TGAT C C AC T
blockSeqs : . G . . . . . . . . . . . A . . . . . C G . . . . . . . GA . . . . . . . . . . . G . C . AC . AT A . . G . . . . . . . . G . . . . CA . . A . C G A A G . . . . . . TGAT . TA . . A . . G . . . . . . . T . . . . . . . T . TGTCAACGA . . . . . . C C T TTATATAT . TT A . . . . . . . T . . AC . G . T . . CA . . . . A . . . . . G . . . . . . . . . . . . ATA GA . . . . A T . . . . . . C . TAATAA . . A . G . A T . . T A . T C AC .
blockSeqs : . . . . . . . . . . . . . . . . . . . A G . . . . . . . GT . . . . . . . . . . . A . A . G . T T . . T . . . . . . . . C . . . . T . . . . C G G A A . . . . . . TGTT . TA . . A . . T . . . . . . . C . . . . . . . . . . . . . . . . T T . TTATATA . . . . . . . . . . A . . . . G . . . . T . . . . . . . . . . G . . . . . . . . . . . . AA TT . . . . . . . . . . . . . . TAACA . . C . G . A A . . . T . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . C A . . . . . . . GA . . . . . . . . . . . A . A . G . T G . . G . . . . . . . . G . . . . A . . . . C G A A A . . . . . . ATGT . TA . . A . . A . . . . . . . T . . . . . . . . . . . . . . . . C T . GTATATA . . . . . . . . . . T . . . . G . . . . T . . . . . . . . . . A . . . . . . . . . . . . AT TT . . . . . . . . . . . . . . TCAAA . . A . G . A A . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . C G . . . . . . . TT . . . . . . . . . . . G . C . G . T A . . G . . . . . . . . . . . . . T . . . . A A A A A . . . . . . GTG . G . . A . . A . . . . . . . C . . . . . . . . . . . . . . . . A C . TTAATA . . . . . . . . . . T . . . . G . . . . T . . . . . . . . . . G . . . . . . . . . . . . AT TG . . . . . . . . . . . . . . TAATA . . A . C . T A . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . A G . . . . . . . GT . . . . . . . . . . . G . T . C . T A . . G . . . . . . . . . . . . . T . . . . A G . . A . . . . . . ATG . G . . A . . A . . . . . . . T . . . . . . . . . . . . . . . . C T . TTTATA . . . . . . . . . . T . . . . A . . . . T . . . . . . . . . . G . . . . . . . . . . . . TT TA . . . . . . . . . . . . . . TAACA . . A . G . T A . . . T . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . C A . . . . . . . GA . . . . . . . . . . . A . C . T . C G . . . . . . . . . . . . . . . . C . . . . A . . . . . . . . . . TGT . G . . A . . T . . . . . . . C . . . . . . . . . . . . . . . . A T . TTTATA . . . . . . . . . . A . . . . G . . . . A . . . . . . . . . . G . . . . . . . . . . . . AT TG . . . . . . . . . . . . . . TATA . . A . C . T A . . . A . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . T . . . . . . . . . . . A . . . . . . . . . . . GTG . T . . . . . A . . . . . . . T . . . . . . . . . . . . . . . . A A . TTA . . . . . . . . . . A . . . . A . . . . A . . . . . . . . . . . . . . . . . . . . . . . AT TG . . . . . . . . . . . . . . TGAA . . A . G . T C . . . C . . . . .
blockSeqs : . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TGT . T . . . . . T . . . . . . . T . . . . . . . . . . . . . . . . C T . TTA . . . . . . . . . . A . . . . G . . . . A . . . . . . . . . . . . . . . . . . . . . . . AA TG . . . . . . . . . . . . . . TAC . . T . T . A . . . . T . . . . .
blockSeqs : . . . . . . . . . . . . . . . . TGT . T . . . . . . . . . . . . . T . . . . . . . . . . . . . . . . C C . TTA . . . . . . . . . . A . . . . G . . . . T . . . . . . . . . . . . . . . . . . . . . . . T GA . . . . . . . . . . . . . . . . . A . C . G . . . . T . . . . .
blockSeqs : . . . . . . GT . G . . . . . . . . . . . . . C . . . . . . . . . . . . . . . . . . . TT . . . . . . . . . . A . . . . G . . . . A . . . . . . . . . . . . . . . T T . . . . . . . . . . . . . . . . . C . C . . . . . . G . . . . .
blockSeqs : . . . . . . . . T . . . . . . . . . . . . . . . . . . . A . . . . . . . . . . T . . . . . . . . . T . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G . . . . . .
blockSeqs : . . . T . . . . . . . . . . . . . A . . . . . . . . . . . . . . . .
blockSeqs : . . . . . . . . . T . . . . . .
blockSeqs : . . . .
blockSeqs : . . . .
blockSeqs : . .
blockSeqCons : TTTATA***********************
originalCons : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--CTCCC-TAG-AC-T----------------T-ATA------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
finalCons : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--CTCCC-TAG-ACTTTATA-----------------------GC-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36 ): AAAATCAAAAGCAAATGTGATCCACCATTTTT
Alignments
lowQualScore : 111111 2222222222222 1111 1 1 1 3333333 11 1 111111111 222222222 3333333333333333333333 222222222
lowQualScore : 55 7 3 3 3 3 3 4 4 4 111111 55 4 99 55 3 3 4 4 3 2 3 2222222222222 4 4 4 55 4 33 4 4 4 4 777 66 66 4 4 66 777 1 5 1 5 3333 4 777 88 4 5 1 5 66 5 66 888 5 5 5 8 5 5 5 5 999 5 5 0 5 0 2 55 1 3 3 44 3 3 44 3 3 1111111 3 77 3 44 7 3 88888 0 3 555 0 3 555 2 2 2 44 2 3 3 3 3 2 2 6 222222222 444444444 555 3 888888 3 3 3 777 55 6 8888888888888888888888 5 2 2 9999 5 444 2 2 2 2 5555 2 1 2 5555 888 2 1 2 66 0 33 2 9999 44 3 555 55 0 88 3 3 3 3 3 88 3 3 3 0 3 3 3 6666 3 44 33 2 2 777 444 0 3 555 3 3 77 6 3 3 3 555 44 3 6 3 000000000 3 44 33 3 1 3 0 2 7 3 3 77 1 6666 4 4 66 2
lowQualScore : .. . . . . . . . . . ...... .. . .. .. . . . . . . . ............. . . . .. . .. . . . . ... .. .. . . .. ... . . . . .... . ... .. . . . . .. . .. ... . . . . . . . . ... . . . . . . .. . . . .. . . .. . . ....... . .. . .. . . ..... . . ... . . ... . . . .. . . . . . . . . ......... ......... ... . ...... . . . ... .. . ...................... . . . .... . ... . . . . .... . . . .... ... . . . .. . .. . .... .. . ... .. . .. . . . . . .. . . . . . . . .... . .. .. . . ... ... . . ... . . .. . . . . ... .. . . . ......... . .. .. . . . . . . . . .. . .... . . .. .
lowQualScore : 00 3 6 6 6 6 6 4 4 0 555555 55 0 55 55 6 6 0 0 9 7 6 0000000000000 0 0 0 55 0 99 4 4 4 4 888 11 11 4 4 11 888 7 0 0 0 6666 4 000 11 4 0 4 0 99 0 99 888 0 0 0 1 0 0 0 0 111 0 0 0 0 1 5 22 2 2 6 66 3 3 66 3 3 2222222 3 22 3 66 3 3 33333 0 1 444 5 1 444 9 9 9 33 9 1 1 1 1 9 9 2 333333333 666666666 444 1 888888 1 1 1 000 22 2 0000000000000000000000 7 9 9 5555 3 777 7 7 7 7 7777 7 0 7 7777 999 9 2 9 88 9 99 9 5555 22 1 444 00 5 66 6 6 6 6 6 77 1 1 1 2 1 1 1 5555 1 22 99 9 9 444 888 6 1 444 1 1 33 2 1 1 1 444 22 1 2 1 444444444 1 22 55 1 5 1 2 2 4 3 3 99 0 5555 7 4 11 4
consensus : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--CTCCC-TAG-ACT----T---------------TATA-G-C-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
Reference ( family-3828 ) : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTCAG-ATTAAG-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CGTACAAATATAAGTGNACATT-TTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATNTATGATGTTTTCTG-CG---TATT-A-T-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-ACGGACA-TTGTCGGCGCA-CA-GATAAAT-TAT-C-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACAAAAACGGGAGCTGGAACGG--A-C-A--TCA-GATCACAGGA-A--GTG--T-AGCAAAATGATGA-CATT--GAAAA-TA-----TTATNAATC-ATC---ATTACA-ATGCCC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--CTCCC-TAG-ACT----T---------------TATA-G-C-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTNT-GA----A---GGCCAGCTT-GAGGG-GGCAAACATTTGA--TTCGGAAGG--A-GATA---NTAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATG-A--TGCTAAT-AAAT-AGGAA-AAGAAAGTTAATNCAATT-TT-C--TNACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|1 : AGGGTTGTCCTAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACGC-A-TCAGAT-CCAAAACATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATAAAA--CAAAA-GTGTAA-AATTTAAAACAAATA-TCT-TTTAAAATAAATGAGTTATTTCAG-ATTAAG-------------GAGTACTC-TAT-G-AG--CCATGTTAGCGCA-TGGCTAAATATAAGTAAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--AAAAGG--A-CATACCTTCA-T--AA---TAGATAAATCGCACTCAAATTTATATC-AACGGAATTTATGATATTTTCTG-CC---TAAT-A-T-ACTAGG-TTTTCA-AGCCTAAGACGTCATCAATTGTAGAGAA-ATAACATCA-TTTT---AAACA-GCTCTGTAATGAATTTTTT--C---CAATCTAA-TG-GCAACC-AC-GACA-TTGTCTGCGCA-CA-GATATAT-TAT-C-AAATT-TT-GTG-TAGATCTTGGTTTGACTCCGACTCA-GAC-AAAACGAGAGCAGGAACGG--A-C-A--TCA-GATCACAGGA-A---TGT-T-AGAAAAAT-ATGA-CATT--GAAAA-TA-----TTACAAATC-ATC---ATTACG-AT-CCC---CTGCGGATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AGAACTC-TGGGTTA-T-CG---------AA---------CTTC---GA-C------ACC-CA-CG-TTA--CTCCC-TAG-ACT----TACATTTACATGTATATATA-G-C-ATC---GC-TCG-TTT---TGGCTAA-T-TTTCT-A----C-TTAT-GA----A---GGCCAGTTT-GA-GG-GGCAAACATTTGA--TTTAAAAGT--A-TATA---TTAGAGG--AGC-A---GTGAGGA--ATGTCAATGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTCTGTTT-G-AAATAT-GGGTTAAA-CAA-TAT-GAAAAATGCATCACGC-AT-CGGGG-ACAATGCTTT-A-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGCGCTGACAG--AT-AT-GAACAA-AGGTGTT-TGATTTT--TTTT-A---TGTT-AATATTAAGTGA-AA--CA-TTTTGATGAA-CATTTG-T-A---C--AA-A-GT-AG-TAAC---AAATA-A--TGCTAAT-AAAT-AGCAA-AAGAAAGTTGATATAATT-TT-C--AAACAAATAAA----TGAATTATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|10 : gTGGAACAA--AGC-A--TCA-AATCACAAAATA--GT---T-AGCAAAA-GATGA-CATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAA--TA-TA-T-CT-AGAAC-C-AGGGTTAAT-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTA---TCCC-CAG-ACT----T------------------A-G-C-ATTTT-GCATCAATTT---TGA-T-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGGAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-A-GTTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AGGTGAT-GAAATTTTGGTTA-T---TTTT-AATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT--ATT-GAGCT-AAGAACGTTAATGC-ATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTT-GGA--CAACC-TTCGTa
gi|11 : gaAACGG--A-C-AAGTTA-GATCACAGAA-ACTGTA--T-AGCAAA--GATGAACATT--GAAAACTA-----TT--GAACC-ATCTTCATTACAGATGCCC---CTGTGCATACAT-C-GG-C-CAAAA-TA-GA-T-GT-AGAA-TC-GG--TTA-AACA---------GA---------CTTC---AA-C------ACC-C----------------------------------------------A-A-C-AC---------GACTT---TGCCT-A-A-TTCC--A----C-TTTT-GA----AAC-GTTCAGCTT-GAGGG---TAAACATTTGA--TTTGGAAA---A-GAT----TTAGAGG--AGC-A---GTGAATATAATTTCAACTTGTCTCTGAATC-GGCGTGGTTTTTAAAAGTGTGTTT-G-ACAA-T-AGGTGAAA--GA-CAT--AAAAATGCATCGCGCCAT-CGGGGTACAGTACTTC-ATAAAA-AGAT----T-TCTTGGATAACGTCATG--TTGTGCGCCGACAG--AT-AT-GAACATGAAGTGTT-TTATTTTTGTTTTTA---TGTT-GAT--TAAGA-A-TA--CC-TTTTGATGAA-ATTTTG-T-A---C--AA-AAGT-AG-TAAC---AAATG-A--TGCTAAT-AAATCAGGAATAAGAAAAATAATACA-TT-TT-C--CAACAAATAAA----CGATTAATTAA-CATTGTCCACGA-CTTTTT-GGA--CAACCTCTCa
gi|12 : tt---GC-TCGATTT----GCCT-A-GGTTTCT-GAGGTCGTTATCGT----ATCCGGCCAGCTT-GAGGG-TGCACAAA-TTGT--TTTGGAGGG--ATGAGG---TGAGAGGGAGGT-A---GTGAGG
gi|12 : ATGTCATCAGTTGTGCGCCGACAGCAAT-AT-GA-CAT-AGGTCTT---ATTTATGTTTT-AATGTGTT-GATATTAA-AGA-TAA-CAATTTTGAT--A-AATTTG-TCA---CGAAA-A-GT-AGATAATCAAAAATGGA--TGCTAAT-CA-T-ACGAA-AAGAAAGTTAATACTATTCTT-C--TTAC-AATAAA----TGAggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgatgtcatcagttgtgcgccgacagcaatatgacataggtcttatttatgttttaatgtgttgatattaaagataacaattttgataaatttgtcacgaaaagtagataatcaaaaatggatgctaatcatacgaaaagaaagttaatactattcttcttacaataaatga
gi|13 : gctcgatttgcctaggtttctgaggtcgttatcgtatccggccagcttgagggtgcacaaattgttttggagggatgaggtgagagggaggtagtgaggggagtagtcgtcatttcatatcgtcgtcgcagtctctctcgcatctgaagttgccaggtgggcttgagtagtaaggtgtgttcgtcggcgagaattgtgtgtaaaaaatgaaagaagaatagtaaaatattgctcattcgactgcagtcttattttgcttagcagtggataccaacatacgctatgatagctgtctcgAACTC-GGGGTTA-T-CG---------GA---------CTTC---GA-C------ACC-CA-CT-TTA--CTCAC-TAG-ACT----TA--------------TATA-G-C-ACC---GC-TCGATTT---TGCCT-A-T-ATTCT-A----C-TTTT-GA----A---GACCAGCTT-GAGGG-GGCAAACATTTAA--TTCGAAAGG--A-GATA---TTAGAGG--AGC-A---GTGAGGA--ATTTTAACTTGTCTCTGAATCAGGCGTGGATT--GTAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CCA-CAT-GAAAAATGTGTTGCGC-AT--GGGG-ACAATACTTT-G-AAAA-AGAA----C-TTT--GATAACGTCATAATATGTGCACCGACAG--AT-AT-GGACAT-AGGTGTT-TTATTTTTATGCT-A---TGCT-AATATCATGAGA-TA--CA-TTTTGATGAA-AATTTG-T-A---C--AA-A-GT-GG-TCAA---AAATG-A--TGTTAAT-AAAT-AAGAA-AAGAAAGTTGATACAATT-TT-T--TAACAAATAAATGATCGAATTATCAA-TATTGCTCACGA-CTTATTGGGA--CAACC-CTCG
gi|14 : TATTGATC-ATC---ATAATA-ATGCCTGGGCTGCGCATACAT-C-GA-C-TGAAA-CT-GA-T-CT-AGAATTC-GGAGTTA-T-CGAATTTCAAAGA---------CTTC---CA-C------ACC-CA-TC-TTA--TTCCC-T----------T---------------T--------------GC-TCCATTT---TGCCT-G-T-TTTCC-G----T-TTTT-GA----A---GGCCAACTT-GAGGG-GACATAAATTTGA--TCCGGTAGA--A-AAT
gi|15 : aaTAAGCTATTTCAG-ATTAAG-------------GAGAGTTC-TCT-C-AG--CCTTGTTGGCGCA-TGTACAAAGATAAGTTGAAATT-T------------ATT-GGG---TTAGAT--GAAAGGACA-TATAGCTTCA-T--AACTTTATATATATTT--TTTTAATGTATAT
gi|16 : ATTTGTGCGGCAAAAC--CT-AT-AA---T-AGATGTT-T---------TCT-A---TGTC-ATTATGAAAAAA--A--AA-TTTT--T------TTTT-T-AAATC--AC-A-GA-AG---------AACG-A--TACCATT-AGAT-AACAA-AAGAAAACGAA---AATT-TTTC--TAACCAATATA----TGAATGATTAA-CATTGTTGAGGA-CGCGTTAGGA--tttattttttttatttttataatatagctttattgggttag
gi|17 : AA-GTGTAA-AATCTAAAACAAATA-TCA-TATCTAATAAATGAGCTATTTAAT-ATTAAG-------------GGGTGCTT-TAT-G-AG--CCATATTGGCGCA-CGTACAAATATAGGTGAATATT-TTCGAT-GATCC-ATTGGGG---TTAGAT--GGAAAG--A-TATAGCCTCA-T--AA---TAGATATATCGCATaatctcata
gi|18 : -C-GA-C-CGAAA-TA-GA-T-CT-AGAACTC-GGAGTTA-T-TG---------GA---------TTTCAAAGA-CTTCCCTACC-CA-CG-TCA--CTCCT-CAG-ACT----------------------TA-GTT-AC----------ATTTGGCGGCCT-A-T-TTTCC-A----C-TTTT-AA----A-----------------G-AGCAAAAATTTGAT-TTTGGAAGA--A-GATATATATAGAGG--AGC-A---GC
gi|19 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTGATAATTTC-C-AAATTAC-------AGGC-CCAAAAGATA-TTTTA-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTAA-CATTTAAAATAAATA-TCA-TAACATGTGAATGAGCTATTTCAG-
gi|2 : gAGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATGAGCTACTTTAG-ATTAAA-------------GAGTGTTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACATT-GTCTAT-AATCC-ATT-GGG---TTAGAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACCAACGGACA-TTGTCGGCGCA-CA-TATAAAT-TAA-T-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTC--GACAAAAACGGG-GCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAAATAAAAA-AATT--GAAAA-TA-----TCATAAATC-ATC---ATTACC-ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GATC------ACC-CA-CC-TTA--ATCCCGTAGTATT----T---------------AATA-G-CAACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GAAGG-GGCAAACATTTGA--TTTTGAAGG--A-AATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGCGTGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT--AAAAATGCATCGCGC-AT-CGGGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-AT-GAAGTT-GGGCGTT-TGATTTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA-TTTTGATGAA-AATTGG-T-A---C--AA-A-GT-AG-TAAT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAACTTAATTCAATT-TT-C--TTACAAATAAA----CGAATTATCAA-CATTGTCCACGA-CTTTTGGGGA--CAA-C-CTCGT
gi|20 : AGGGTTGTCCCAAAAAGTCTCGTGG-CCAACGTTCATAATTTC-C-AAACTACGC-AATCAGATTCCAAAAGATT-TTTTTTACA-TA------A--ATAACTTTA-ACTT--ACTTCAAA--CAAAA-GTGTAA-AATTTTAAAGAAATATTCA-T
gi|21 : AGGGTTGTCCCACGTACTC--GTAG-ACAATGTTGTTAGTTTT-CGAAATTA-GC-A-TCAAAT-CCATAGGA----TTTT-ACA-TGGAAAAAA--AAAACCTTATACTT--ATTCTAAA--CAAAA-AGGTAACAATTTGAAA
gi|22 : -TT------A--ATAACTTTA-ACTT--ACACCAAA--CAAAAAGTGTAA-AATTTAAAATAAAGA-TCT-TAACAAATAAATGAGCTATTACAG-ATGAAG-------------GAGTGCTC-TAT-C-AG--CCATGTTGGCATA-CGTACAAATATAtgggcataa
gi|23 : ACGC--G-C-A--TCA-GATCA---AA-A--ATG--TTAGGAAAA-GGTGG-CATT--GA----CA-----TTA-AAGTA-GTA---AT---A-ATGCCC---CTGTGCATACAT-C-GG-C-CGAAA-
gi|24 : AATGCATCGCGC-AT-CGGGG-AAAATACTTGAG-AAAA-AAAA----CCTCT--GATAACGCCATGATTTGTGCGCCGACAG--AT-AT-GAAg
gi|25 : AAGATTATCCCTAAAC-TT--GTGG-ACAATGTCAATAACTTC-A-AAAACGCGC-A-TCAGAT-CAAAA
gi|26 : cgCATCACGC-AT-CGGGG-ACAATAC-TT-G-AAAACAAAA----C-TCT--GATAACGTCATGATTTGTGCGC
gi|27 : aGGTTGTCCCAAAATGTT--GTGA-ACATTGTTAATGATTTT-C-AAAATATGC-C-TCAAAC-C
gi|28 : aTAAA----TGAATTAGCAA-CAGTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|29 : TTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|3 : ctaatAGGGTTGTCCAAAAAAGTC--GTGGGATAATATTAATAATTTC-C-AAACTACGCTA-TCAGAT-CCAAAAGATATTTTTT-ACA-TT------AATATAAC-TTA-ACTTAAACATTAAA--CATAA-GTGTAA-AATTTAAAATCAATA--CATTAT-AAAT-AATGAGCTATTTCAG-ATTAAAGCTGTTACGCTCTGGGTGCTC-TAT-GAAG--CCATCTTGGCGCA-CGTACAAATATAGG-GAACATT-TTCTAT-AATTCAATT-GGGGGTTTAGAT--GAACGG--A-TATAGCCTCA-TAAAA---TAAATATAATGCATTCAAATTTATATC-AACG--ATCTATGATGTTTTCTT-CGTTCTATTAA-TAACTAGT-TTTTC--AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCATTTTTA--AAACGTCCTCTGTAATGAATGTTTT--T---CAATGTAA-CGTGCAACC-ACGG-CAGTTGTCGGCGCA-CACGATAAAT-TATCC-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCACTCG-GAC-AAAACGAGAGCTGAAACGGCAG-C-A--TCA-GATCATTGGA-A---TGATT-AAAAAAATAATGA-CATT--G-AAA-TA-----TTAT--ATCTATC---ATTACA-ACGCCA---CTGCGCATAC-T-C-GG-CTTGAAATTACGA-TAGT-A-AACTCGGGGGTTA-T-C----------GA---------CTTC---GA-C------ACCGCACCC-TTA--CTACC--AG-CCTTATAT---------------TATAGG-C-ACC---GC-TCGATTT---TG-CT-ATT-TTTCTAA----C-TTAT-GA----A---GGCCAGC-T-GAGGGTGGC-AACATTTGAAGTTTGGCGGG--A-T-CA---ATAGAGG--AGCAA---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTTA-GAAGGTGT-TTT-GAACAAATGGGGTGAAA-CGA-CATGGAAAAATGCATCGT-C-ATCCAGGG-AAAATAC-TT-G-AAAA-AAAAAACCC-CCA--TATAACGTCATGATTTGTGCGCCGACAG--AT-ATAAAACATAAGGTCTT-TAATTTTTGTTTT-A---TGTTAAATATTCAGAGAGTA--CATTTTTGATGGACAATTTG-T-A---C--AA-ACGT-AG-TAATA--AAATG-AACTGCTAATGAAAT-AGCAA-AAGAAAGTTAAT
gi|30 : gTTATCAA-CATTGTCCACGACCTTTTTGGGGACCAACC-CTCGTa
gi|31 : ctaatAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGT
gi|32 : agct---TATT-A-T-ACTAAG-TTTTCA-AGCGCAAGACGTCATAAATGGCAG
gi|33 : tATCAA-CATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|34 : TA-G-C-ATC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----
gi|35 : ATCNTCCACGA-CTTTTTGGGA--CAACC-CTCGT
gi|37 : t-CATTGTCCACGA-CTTTTTTGGA--CAACC-CTTG
gi|4 : AGGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAACTACAC-A-TCAGAT-CCAAAAGATA-TTTTT-ACA-TT------A--ATAACTTTA-ACTT--ACATCAAA--CAAAA-GTGTTA-AATTTAAAACAAATA-TCA-TATCAAATGAATGAGCTATTTTAG-ATCAAA-------------GAGTGCTC-TAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTTTACATT-TTCTAT-AATCC-ATT-GGG---TTAGGT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCAAATTTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A-T-ACTAGA-CTTTAATGGCGTAAGACGTCATAAATGGCAGAGAA-ATTATGTCA-TTTTA--AAACG-GCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-GATAAAT-TAT-A-AAA-TGTT-GTG-TAGATCGTGTTTGGACTCCCGCTTG-G--AAAAACGGGGGCTGGAATGG--A-C-A--TCA-TGTCACAGGA-A---TGT-T-AGCAAAAT-ATAA-AATT--G-AAA-TA-----TTAT-AATC-ATC---ATTACA-ATG-CC---CTGCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GT-AAAACTC-GAGGTTA-T-TG---------GA---------CTTC---GA-C------ACC-CA-CC-TTA--ATCCC-TAG-ACT----T---------------TATA-G-C-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCTT-GAAGG-GGCAAACATTTGA--TTTGGAAGG--A-GATA---ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAA-ATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CA--AAAAAATGCATCGCGC-AT-CGGGG-ACAATACTTT-G-ATAA-GGAA----C-TCT--GATAACGTCATGGTTTGTGCGCCGACAG--AT-AT-GAACAT-GGGCG-T-TGATTTTTGTTTT-A---TGCT-AATATTAAGAGA-TA--CA--TTTGATG-A-AATTTG-T-A---C--AA-A-GT-AG-T-AT---AAATG-A--TGCTAAT-AAAT-AGGTA-AAGAAATTTAATT-AATT-TT-CT-TAACAAATAAA----CGAATTATCAGCCATGATCCACGA-CTTTTGGGGA--CAACC-CTCGT
gi|5 : cgGGTTGTCCCAAAAAGTC--GTGG-ACAATGTTAATAATTTC-C-AAGCTACGC-A-TCAAAT-CCAAAAGATA--TTTT-ACATTT------A--ATAACTTTA-ACTTA-ACA-CAAA--CAAAA-GTGTTA-ACTTTAAAACAAACA-TCA-TATAAAATGAATGA-CTACTTTA--ATTAAA-------------GAGTGTTCTTAT-G-AG--CCATGTTGGCGCA-CATACAAATATAAGTGTACA-T-GTCTAT-AATCC-A-T-GGG---TT-GAT--GAAAGG--A-TATAGCTTCA-T--AA---TAGATATATCGCATTCGAA-TTATATC-AACGGAATATATGATGTTTTCTG-CG---TATT-A---ACTAAA-TTTTTA-AGCGTAAGACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GTTCTGTAATGAATGCTTT--T---CAAGGTAA-GG-GCAACC-AC-GACA-TTGTCGGCGCA-CA-TATAAAT-TAA-T-AAA-T-TT-GTG-TAGATCGTGGTTTGACTCCCGCTCG-GACGAAAAAGGG-GCTGGAACGG--A-C-A--TCA-TGTCACAGGA-A--GTG--T-AGCAAAATAAAAA-AATT--G-AAA-TA-----TCATAAATC-ATC---ATTAC--ATGCCC---C-GCGCATACAT-C-GG-C-TGAAA-TA-GA-T-GTAAAAACTC-GAGGTTA-T-CG---------GA---------CTTC---GA-T------ACC-CA-CC-TTA--ATCCC-TAGTACT----T---------------TATA-G-C-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-GA----A---GGCCAGCAT-GA-AG-GGCAAACATTTGA--TTTTGAAGG--A--ATAC--ATAGAGG--AGC-A---GCGAGGA--ATTTCAACGTGTTTCTGAATCAGGC-TGGTTT--GAAGATGTGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT---AAAATGCATCGCGC-AT-C-GGG-ATACTAATTT-G-ATAA-GGAA----C-TCT--GATCACGTCATGATTTGTGCGCCGACAG--AT-A--GAGT-T-GGGCGTTATGA-TTTTGTTTT-A---TGCT-AATATTAAAAGA-TA--CA--TTTGATGAA-AATTGG-T-A---C--AA-A-GT-AA-TGA----AAATG-A--TGCTAAT-AAAT-GGTAA----GAACTTAATTC-ATT-TT-CCTTCACAAA-ATA----CGAATTATCAA-CATTGTCCACGA--TTTTGGGGA--CAA-C-CTCGT
gi|6 : TTTCAGCATTAAG-------------GAGTGCTC-TATTG-AG--CCATGTTGGCGCAACGTGCAAATATAAGT-TACATTCTTCTACGAATTC-ATT-GGG---TTAGATTGGAAAGG--AATATAGCTTCAAT--AA---AAGATACAATGCATT-GACTTT-TATC-AACGGAATCTATGATGTTTCTAG-CAC--TATT-AAT-ACTGGGGTTTTCA-AGCATAAGACGTCATAA--GGCAGAGAACATGACGTCA-TTTTATAAAACG-GCTCTGTAA-GAATGTTTTCTT---CA-TGTAAGCG-GCAACC-AACGACA-TTGTCGGCGCAGCG-TATAAATATAC-T-AAA-T-TTTGTGGTAGATCGTGGTT-GATTCCAGCTCGAGACAAA--CGGGAGCTGGAACGG--A-CCA--TCAAGATCACAGGA-AT-GTT--T-AGCTAAAT-ATGA-TATTTTGAAAA-TACTTGATTAT-AATC-ATC---AGTACA-ATGCCA---CTGCGCATACATTC-GAAC-TGAAA-TA-GAAT-GT-AGAACTC-GGGGTTA-TTCG---------GA---------TTTC---GA-C------ACC-CA-CCCTTAATCTCCT-AAG-ACT----TA--------------TATATG-C-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TGTT-GACTCGA---AGCCAGCTTTGAGGG-GGTAAACATTTGA--TTGTGAAGGGGA-GATA---TAAGAGG--AGC-ACGTGCGAGA-----TTCA-CATGTTTCTGAATCAGGCGTGGTTT--GAGGATGTGCTTCG-ACAAAT-GGGTGAAAACGAACAT-GAAAAATG------GC-AA-TGGAG--CAATACTTT-G-AAAA-GGAA----C-TCT--TATTATGTCATGACTTGTGCGCCGACAG--ATAAT-GAAC---AAGTGTT-TGATTTTTG-TTT-A---TGTT-AATATTAAGAGA-TAACCA-TTTTAATGAA-AATTTGAC-A---C--AAGA-GTAAG-T-AC----AATG-A--TGCTAAA-TAAT-AGCAA-AAGAAATTTAATTC-ATT-TT-C--TTACAAATAAA----CGAATTATCAATCATTGTCCACGA-CTTTTTGGGA--CAACC-CTCGTa
gi|7 : atagataaatgcagaaatTCGCATTCAAATTTATATC-AACGGAATTTGTGATGTTTTCTG-CC---TAAT-A-T-ACTAG--TTTTCA-AACGTAAAACGTCATAAATGGCAGAGAA-ATGACGTCA-TTTTA--AAACG-GCTCTGTAATGATTTTTTT--TTTTCAATGTAA-CG-ACAACC-ACG-ACA-TTGTCGACGCA-CA-GATATAT-TAT-C-AAA-T-TTAGTG-TAGATCGTGGTTTGGCTCTAACTCA-GACAAA--TGGGAGATGGAACGG--A-C-A--TCA-GATCACAGGA-AT-GT---T-AGCAAAAT-ATGA-CATT--GAAAA-TA-----TTATTTATC-ATC---ATTACA-ATGCTC---CTGCGCATACAT-C-GG-C-CGAAA-TA-GA-T-GT-AGAACTC-GGGATTC-T-CG---------GA---------CTTC---GA-C------ACT-CA-CC-TTA--CTCCC-TGG-ACG----TA--------------TATA-G-C-ACC---GC-TCGATTT---TGCCT-A-T-TTTCT-A----C-TTAT-AA----A---GGCCAGCTT-GAGGG-CGCAAACATTTTA--TTCGGAAGG--A-GATA---ATAGAGG--AGC-A---GTGAGGA--ATTTCAACGTGTCTCTGAATCAGGCGTGGTTT--GAAGGTATGTTT-G-ACAAAT-GGGTGAAA-CGA-CAT-GAAAAATGCATCGCGC-AT-CGAGG-ACAATACTTT-G-AGAA-AGAA----T-TAT--GATAACGTCATGATTTGTGCGCCGACAG--AT-AT-GAACAT-AGGTGTT-TGATTTTTGTTTT-A---TGTT-AATATTAAGAGA-TA--CA-TTTTGGTGAA-AATTTG-C-A---C--AA-A-GT-AG-TAAC---AAATG-A--TACTAAT-AGAT-ATCAA-AAGAAAGTTAATACAATT-TT-C--TTACAAATAAA----TGAATTATCAG-CATTGTCCACGA-CATTTTGGGA--CAACC-CTCGT
gi|8 : TGTCCCAAAAAGTC--GTGGGACAATGTACATAATTTCGC-AAACTACGC-A-TCAGAT-CCAAAAGATA-TTTTT-AC--TT------A--ATAACTTTA-ACTT--ACATCAAAAACAAAA-GTGTAA-AATTTAAAACAA-TA-TCA-TATCAAATAAATGAGCTATTTCAG-ATTAAG-------------GGGTGCTC-TAT-G-AGAGCCATGTTGGCGCA-CGTACAAATATACGTGAACATT-TTCTAT-GATCC-ATT-GGG---TTAGAT--GAAATG--A-TATAGCCTCA-T--AA---TAAATGTATCGCATTCAAATTTATATCAAACGGAATCTATGATGTTTTCTGTTT---TATT-A-C-ACTAGG-TTTTCA-AGCGTAAGACGTCATAAATGGCAGAGAA-AT--------TTTAA--AAACG-TCTCTGTAATGAATGTTTT--T---CAATGTAA-CG-GCAACC-AC-GACG-TTGTCGGCGCA-CA-GATAAAT-TAT-CAAAA-T-TT-GTG-TAGATCGTGGTTTGACTCCAACTCG-GAC-AAAACGAGAGCTGGAACGG--A-C-A--TCA-GATCATTGGA-A--ATGT-T-AGCAAAATAA-GA-CATT--G-AAA-TA-----TTATAAATC-ATC---A-TACA-ATGCCC---CTGCGCATACAT-CGGG-C-TGAAT-TA-GA-T-GT-AGAA-----AGGTTA-
gi|9 : GGAGATGGAACAA--G-C-A--TCA-AATCACAAAA-AT-GT---T-AGCAAAA-GATGA-CATT--GAAAA-TA-----TCATTTATC-AAA---ATGACA-ATGCCC---CTGCGCATACAT-C-GG-C-TGAAA-TA-TA-T-CT-AGAACTC-AGGGTTA-T-CG---------GATGTCAACGACTTC---CT-C------ACC-CA-CT-TTA--CTCCC-CAG-ACT----T------------------A-G-C-ATTTTTGCATCAATTT---TGCAT-A-T-TTTTC-A----C-ATTC-GA----A---GGCCAGCTT-GAGGA-GGCAAATATTTGA--TTCGGAAAA--A-GATA---TTAGAAG--AGC-A---GTGAGGA--ATTCTAACTTGCCCCTGAATTAGATGTGGTTT--GAAGGTGTGTTT-G-ACAAAT-GGGTGAAA-CGA-TCT-GAAAAATGCATTGCGC-AT-CGGGG-ACATTACTTT-G-AAAA-AGAA----C-TCT--GATAACGTCATGATTTGTGATCCAACAG--AT-CT-GTACAA-AGGTGAT-GAAATTTTGTGTT-A---TGTT-TATATTACAAGA-TA--CT-TTTTCATGAA-AATTTG-T-A---C--AA-A-GT-------------ATA-A--TGCTAAT-CATT-GAGCT-AAGAACGTTAATGCCATT-TT-C--TGACAAATGAA----TAAATTATAAA-CATTGTCCACCA-CTTTTTGGGA--CAACC-TTCGTggatctgttggtgttcggagggtcgccccactcctcacctgatctcc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|36 ): AAAATCAAAAGCAAATGTGATCCACCATTTTT