lowQualScore : 11111111111 11111111111111111 11111111111111111111111111111111111111 111111111111 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11111111111111111111111111111111111111111111111
lowQualScore : 1 66666666666666 11111111111 1 1 2222 2222222222222 1 1 2222 111 7777777 1 1 11 9999999999 11 1 1 33 1 88888888888888888888888888888 11 11 1 11 444444444 1 1111 1 1 4444444444 1111 22222 2222 2222 222222 111 1 66666666666 11 111 1 2222 111 2222222 11 1111 1 11 1 1111 33333 1111 11 33333333333 3333333333 4444444444444444444 99999999999999 9999999999999999999999999999999999999999999999999 33 22 1 222 33333333333333333 11111111111111111111111111111111111111 111111 555555555555555555 11 1 1 1 22 44444444444 2222 22222 444444444444 1 11 11 22 1 22222 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 33333 11 111 1 1 111 333333333333333333333333333333 11111 22222222222222222222222222222222222222222222222 222222 1 1 2222 2 11111 66666666666666666666666666666666666666666666666 11111111111 1
lowQualScore : 7 6 0 55 33333333333333 0 55555555555 6 6 5 3 0 8 0 3333 9999999999999 5 7 7 3 9 1111 000 6 2222222 6 5 1 9 7 5 22 1 9999999999 55 3 6 2 6 22 5 1 3 2 44 44 0 55555555555555555555555555555 55 55 7 88 7 11 7 1 6 6 22 0 0 333333333 1 8 99 9999 3 5 0000000000 4444 33333 4444 2222 111111 888 3 2 6 8 8 6 55555555555 33 2 999 0 6 6666 0 777 0 3 8888888 33 2 999 8 7777 3 2 9 0 9 6 33 2 7 6 7777 77777 7777 88 1 88888888888 0000000000 9 99 7777777777777777777 2 88888888888888 2 9999999999999999999999999999999999999999999999999 22 11 5 0 0 6 2 666 2 55555555555555555 33333333333333333333333333333333333333 4 444444 8 6 0 999999999999999999 66 0 7 3 5 33 1 0 33333333333 5555 00000 777777777777 5 88 8 88 1 1 33 5 0 55555 11 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 22222 6 22 6 888 5 6 5 99 6 111 5 222222222222222222222222222222 5 5 2 66 5 44444 11111111111111111111111111111111111111111111111 4 777777 777 4 1 3 1111 6 5 4 6 66 22222 99999999999999999999999999999999999999999999999 66666666666 66 5 7 99 0
lowQualScore : . . . .. .............. . ........... . . . . . . . .... ............. . . . . . .... ... . ....... . . . . . . .. . .......... .. . . . . .. . . . . .. .. . ............................. .. .. . .. . .. . . . . .. . . ......... . . .. .... . . .......... .... ..... .... .... ...... ... . . . . . . ........... .. . ... . . .... . ... . . ....... .. . ... . .... . . . . . . .. . . . .... ..... .... .. . ........... .......... . .. ................... . .............. . ................................................. .. .. . . . . . ... . ................. ...................................... . ...... . . . .................. .. . . . . .. . . ........... .... ..... ............ . .. . .. . . .. . . ..... .. ............................................................................................... ..... . .. . ... . . . .. . ... . .............................. . . . .. . ..... ............................................... . ...... ... . . . .... . . . . .. ..... ............................................... ........... .. . . .. .
lowQualScore : 0 0 2 00 55555555555555 8 00000000000 0 0 0 5 2 2 2 5555 7777777777777 7 0 0 7 0 3333 777 7 5555555 0 0 0 0 0 0 00 0 0000000000 77 7 3 0 0 00 0 2 2 5 22 22 2 00000000000000000000000000000 88 66 8 88 8 00 0 0 0 0 77 7 7 000000000 7 6 33 2222 2 4 3333333333 2222 00000 4444 4444 888888 000 0 8 0 2 2 0 00000000000 00 2 888 0 0 5555 2 555 8 2 8888888 88 5 888 8 2222 5 2 8 0 0 0 88 5 0 5 0000 00000 0000 22 0 88888888888 0000000000 0 22 7777777777777777777 5 33333333333333 2 6666666666666666666666666666666666666666666666666 00 00 0 2 2 5 5 888 5 00000000000000000 22222222222222222222222222222222222222 7 000000 8 0 8 000000000000000000 66 2 0 0 0 00 4 8 44444444444 8888 00000 222222222222 0 22 2 00 0 0 33 7 7 00000 77 33333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333333 77777 0 00 0 000 0 0 0 00 0 777 7 222222222222222222222222222222 0 0 2 99 0 33333 88888888888888888888888888888888888888888888888 3 666666 000 0 4 6 0000 0 0 4 0 99 55555 55555555555555555555555555555555555555555555555 66666666666 99 0 3 22 0
consensus : NAACAAGAGCTGTGAACTGGANCCTCTGCCTA--CATCCCTC----GTGAAGCAAGAAGTCA-----CAGCNCTTGCTCCCGTCATCACCTCTNTCATAAATAAGTCACTTGAGAGTGGTTCC---TTCCCANCATC-TTCAAAGGAGCTATTGTGACACCACTTCTGAAAAAGGNTTCACTAGACCCTG-CATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATACATNTATGTATCCAAGTCGATCGAGAAGGTTGTAGCAGCACAGATAC-------TGCCTACTTCGNTGAGAACAATCTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACCGAGACGGCGCTTCTGCGAG-----------TTN--ACANTG-ACGTGGTNTGTGCCCTTGGAGAGCAGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATACTCA---AGG---ACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACC-C--A--T--TGTCAA----AGTGAAGGGAGCAAAGTCTGGTGCCACTGAG-TTGGG-CTGCGGTGTCCCCCAGGGATC-GGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCTGGGGG-CCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC---CACGTGTATGCTGACGA---TAATGAACTGTATATCANCTTTAAAGTC--CAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGAT----CAACGCAGAC----AAGACTG-AGGTGCTAGTGATATCCTCCA----AACAAA-TGGCCTCTAAGCTGCAC---A------TACCATC--ACTG-N---AAGT--------AGGAGAAGACT-----CCATCACTCCTGTTACTAAGGCCAAGGGCGTT-GTGTAACCATTGACTGTCACATGACCGTGGAGGCACA-T-ATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGNAGTCGCTG-AGTGCTGGA-TATGTTGTCCATGCCTTCATAACAACAAA-------GCTGGACTACTGTAACT-TCTC---TCTCTTCTGCGGCTTAC-ATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATAT---G---AC-GCATTACA---CCAGTA-----CTACG-CTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACTGTCAGCAACATAACTCCATCCTATCTGC--AG-AACCTATG--CCACC---C---G----------AACTCTGCGGTCCAGTGACCGGAGTCTATTAC-----------AAGTGCCATTTACCACNTCACCTGTGATTCAATCTCGAGN-TTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTCAGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAA---------C-TAAA-GATTC-ATC-TT--T-GCAATTCATTAC-AACT--AGTCTG-CGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAATCA-----TAA---TG-GACTCCTTGTCTTCATCCA-CTAGTCATTTG-TTTTT--ATACAA-----CTTA------T------NTT-ATTT--A---A---A-------TAGC--G-TTTAG-A--GCGATATG--GATT-TTACGCTTTACAAAATATAA-TCAT
Reference ( gi|1 ) : TAACTAGAACTGTGAACTGGACCCTCTGCCTA--T-TCCCTT----GTGAAGCAAGAAGTCATGGTGCAGATCTTGCTCTCTTCATAACTTCTATCATAAATAAGTTACTTGAGAGTGGTTCT---TTCCCAAAATCGTTTGAACGAGCTATTGTTACTCCACTTATGAAAAAGGCTTCACTAGATCCTGGCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCA-----G-ATGCATGCAAATTGACTGAGAAGTTTGTAGAAGTGCAAATACATAGATGTACCTAACTCAGTGAGATCAATGTACTGGAGCCATTCCGAAGTGCTTTACGTCAAGGCCATAGTACTGAGACGGTGCTCTTGTGAG-----------GTA--ACGTTG-ACATAGTCTGTGTCATTGAAGAGTGGAAGGTTGTCT--TGCTAGTGCAGTAGGACCTATTGGCTGCCTTTAATATCGTAGATCATTCACGCTTGCTGCAAATACTCA---CAA---ACCTTGGAATTACGGACACTGTGTTCATGTGGTTCGCGTCCGAGCTTACGAATCGTACC-T--A--T--TGTCAA----AATGAGGGGTGCAAAGTCTGGTGCCACTTGA-TTGGG-ATTCGGTGTCTCGCAAGGATT-GCTCCTTGGGCTTGTTATATTCAGCATTTACACGGCATCCCCAACAG-TCA-TTCTCAGGAAAAACG--AT-GTTTTGTAC---AACATGTATGCTGACGA---TAATGAACTGTATATCAGTTTAAAAGTC--CAGCAGCTCGCTCTTGTAGTCAGT--CAGATGGAATCTTGCTTGAGGTCAGTTCAA-ACCTTGGTGGCTC--AGCATCTCCTCAAGAT----CAGTGTTGAC----AAAACTT-AGGTGCTAGTGATATCCTTCA----TAGAAT-TGGCCTCTAAACTGCAC---A------TGCCATC--ACTG-A---AAGT--------AGGAGAAGACT-AGTGCCACTATTACTGTTACTAAAGCCAAGGGTGCTGGTGAAACCATTAACTGCCATAAAACTATGGAGGCACA-A-GTATCAAAAGTGTGCAGAGGTAGCTTAATCCACCTTAAGAACCTGAGCCAGCTGAGCAGATATCTGGACAGGGAGTC--------G--------TGTTGTCCATGCCTTCATAAC----AA-------GCCCGACTAATGTACCTCTTTCTTTTCTCTTCTGTGGCTTACCATCAAAGCAGATCCAGAAGCTCTAATCCATC------------------CAAAACGCTAAAGCAAGTATTATCGCAGGC-CCCCGCAAATAT---G---A---CATTACT---CCAGTA-----CTA---CT-------TTGCCTGCCAGTTCAGCAAAGACTCATCTTCGAGACATTGGTGTTAAAGTATAAAACATTCATCAACATGACTCCATCCTATCTGC--AGTAACTCATA--ACATC---T---G----------AACTTTGCGGTCTAA-----AGAGCCTACTAC-----------AATTGCCATTT---------------ATTCAATCTCAAGA-TTTTAGCGTAACTGGTCCTAAACTGCAAAAGGCTCTACCATATCATATCAAAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAA---------T-TAAA-GACTA-ATC-TG--T-GCAATTCATTAC-AACT--AGTCTG-TGC-----AAAT--------------GA--------------TT--------------ACTATGTTGTGTAATCT-----TAA---TG-GACTCCTTTTCTTTATTCA-CTAGTCGTTTG-TGTCT--ATACAA-----CTTA------C------GGT-ATTT--A---A---A-------TAGC--C-TTTAA-A--GCAATTTG--GATT-TTACGCTTTACAAAGTATAA-TCAT
gi|3 : AACAAGAGCTGTGAACTGGACCCTCTGCCTA--CATCCCTT----GTGAAGCAAGAAGTCA-----CA-AGCTTGCTCCCGTCATCACCTCTATCATATATAAATCACTTGAGAGTGGTTCC---TTCCCAA
gi|6 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccAACAAGAGCTGTAAAGTGGAA--TCTGCCTA--CATCCCTTAATTGTGAAGCAAGAAGTCAT-----AGCCTTTGCTCCCATCATCACCTGTTTCATAAATAATCCACTTAAGAGTGGTTCC---TTCCCACG-TCTTTCAAAGGAGTTATTGTAACACCACTTCTGAAAAAGGCTTCACTAGAGCCTGCTATACCAAAGAACTACTGGCTAGTGTCTAACCTTGCATACATGTATGTATCCAAGCCGTTTGGAAAGGTTGTAGCAACACAGATAC------GTGCCTACTTCAATGAGAGCAATCTAATGGAGCCACTCCAAAGTGCTTACCGTCAAGGGCATAGTACAGAGACGGCACTTCTGTGAGTTCACAATGATGTGGTACATTGTACAT-GTATGTGCCCTTGGAGAGCGGAAGACTGTCTAATGCTAATGTAGTTGGACCTATTGGCTGCTTTTGACAAAGTAGGTCATTCACG--------------TCA---AGG---ACCTTAGAAATAAGGACACTGTGCTCATGTGGTTCGCATCCTATCTTACAAATCGGACC-C--A--GAATGTCAA----GGTGAAGGGAGCAAAGTCGGGTGCCACTGAG-TTAGG-CTGCAGTGTCTGATAGGGGCT-GGACCTCGGGCTTGTcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtactaagacggcacttctacgagttcacaaagatgtggtctgtacccttggagtgcagaaggctgtcttgctagtgcagttggatctattggctgcttttgacactgtacataattcacgctagctgcagatactcaaggaccttggaattaagacactgtgctcatgtggttcatgtcctagtcggaccagattgtcaaagtgaattgagcaaagtctggtgccattgagttaagctgcggtgtcctccaggaatcggtcctcgggcctgttctgttcaacatctacacagcatccctggggcccttctcagaaagaacaatgtcttgtaccacataaatgctgacgttaatgaactgtatattaactttaaaatctatcaggcctctcttttagtcagtccgatggagtctagctagaggccagttctaaccttgatggctcagcatcacctcaagatttcacagacaagactgaggcactagtgatatctcccaaacaaatggcctctaagctgcacattatgcaacacataattatcatcaaggagaagaataccattcctgttactaaagccaatcatggaggcacatatacatgtatcatcagtgtgcagaggtgccttcatctacattaagaacctgaggagatatctggacaggtagtcgctggattatgttgttcatgccttcataactacaaagctggactactgtaactatctcttctg
gi|7 : taagcaccagcattacaaatgtgtgttgcatgataacacagttgacagtaaacagcctttcagagtggtcaacaagctgcttggtaggaactctaccactccactgcttgtcgacaattaaattaccatcagatctggctggcatgtttagtgaatttttgtgcaaaaccttgtacgaattcgcagctctattacatatgacaatcacaatctacatgtcgacccatgtactcggtgataatacaatgtgtaactgaggtcgtctgccAACAAGAGCTGTGAACAGGACCCTATGCCTA--C----------------------AGTC-----------CTTGCTCCCATCATCACTTCCATCATAATTAAGTCACTTGAGAGTGGCTCCTAATTCTCACCATC-TTTCAA--AGCTATTGTGACATCACTTCTGGAAAAGGTTTCACTAGACCC-----------AG----ACAGGTCTGTGTCTAACCTTTCA-----T-ATGTATCCATATTGATTGAGAAGTCTGTAGCAGCACAAATA--------TACATACCTCGCTGAAAACAGTCTGCTGGAGACATTCCAAAGTGCTTACCATAAAGGGCATAGTACTG-GACGGCACTTCTGCGAG-----------TTA--ACAACG-ATGTGGTATGTGCCCTTGGAGACCAGGAGGCTGTCT--TGCTAATGCAATTTGACCTATCGACTGGCTTTGACACTGTAGATCATTCACACTTGCCGCAAATACTAATTTTAAATGACCTTGGAATTAAGGACG-------CA-GTGGTTTGCGTC
gi|8 : cgtagttccaatacatgtggcagtcacaatccacttgttgacctgaccagtattcggtgatgaaactggactccatttccgacgtgttactataaatgaggtcacaaagttaattaggtcatctgccAACAAGAGCTATCAACTTGAACCTCTACCTAAAT-TCT-TC----GTGAAGCAAGGCGTCA-----CAGCTCTTGTTCCCGTCATCACTGCTCTAATGAATAAGTGACTTTAAAGTGGTTCC---TTCCAAACATTGTACAAAAGAGCTATTGTGACACCATTTATGAGAAAGGGTTAACCAGACCCTGACATACCAAA-AACTACAGGC
gi|3 : acactcatcaattcagctaagctccagtattacaggtgcatggtaacaaaggtggcagtaagcagcttttcaaaatggtcaacatgcatcttggtagaaactccactactccatcatctgctgacatatttaccatcagatctggctggcatacttagtgactcttttgtgcagaaatctatgctaagtcgcagctccatagcatgtgacaatcacaatgcacttattgacccaccagcactctgtgatgaaactgtactcaatcatatccatcatgttagtgaggatgaggtcacacaattgattacgccatctgccAGCTAGAGGCCAGT-TCTAACCTTG
gi|2 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccaacaagagctgtgaactggaccctctgcctacatcccttgtgaagcaagaagtcacaagcttgctcccgtcatcacctctatcatatataaatcacttgagagtggttccttcccaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtactaagacggcacttctacgagttcacaaagatgtggtctgtacccttggagtgcagaaggctgtcttgctagtgcagttggatctattggctgcttttgacactgtacataattcacgctagctgcagatactcaaggaccttggaattaagacactgtgctcatgtggttcatgtcctagtcggaccagattgtcaaagtgaattgagcaaagtctggtgccattgagttaagctgcggtgtcctccaggaatcggtcctcgggcctgttctgttcaacatctacacagcatccctggggcccttctcagaaagaacaatgtcttgtaccacataaatgctgacgttaatgaactgtatattaactttaaaatctatcaggcctctcttttagtcagtccgatggagtctAGTTGAACGAGAAGGTTTTATCAGCACAGAAACATA------CCTACTTCAGTGAGAACAATATACTGGAGCTATTCTAAAGTGCTTACCGACAGTGGTATAGTACCGATAC--TGCACTTCTGC-------------T----CGTT---CAAAA-CGATGT------AGAGCAGAAAGGTGTCT--TGCTAGTGCAGTTGGAC-TATCGGCTGCCTTGGACACTATAGATAATTCAGGATTGCTGCAAGTACTCA---AGG---ATCTTTGAATCAAGGACACTGTGCTCATTTAGTTGGCGTCCTATCTTACCAATCGAATC-C--AGGT--TGTCAA----AGTAAAGGGAGCAAAATCTTTTATCACCAAG-TTGAG-CCGCAGTGTCCCCCTAAGATT-TGTCATCGGGCCTGTTCTGTTCAACGTGTACACATTATCTTTGGCAC-CC--TTTTAA--AAAGACA--ATCGTCTTGTACGCTAATGCTTATGTTGACGAATTTCAAGATTTGTA-AT-------GAAGTCATCGG--GCT-GCTGTTGTAGTAAATATCAGATTGAATCTTGAT-GAGGTTAGGTTAAGACCCGAATGGCTCCTAG--TCACTTTAA-AT----CAACGCAAGC----AAGACTG-ATGTGCTAGTGATATCCTCCA----AACTAA-TGGCCGCTAAACTGCAC---A------TACCATC--AATG-C---AAGC--------AGGAAAA--CT-----CAATCACTCCTATTACTAATGCCAAGGGTGTATGTGTAAGCATTTACTGTCAAATGACCGTGACAACACA-T-ATATCATCAATATACAGAGATGCCTTCATCCACCTTAAGAACCTGCGCCAGCTGAGGAGATATCTGAACAGGGAGTCGCTGGAGTG--------TATTTTCCATGCCTTCATAAC----AACAAAGTTGC---ACTACTGTAACT-TTTC------CGCCTGTGGTTTACAATTAAAACAGATCCAGATGTTTCAATCAATC------------------CAAATCGTTGTATCCAGAATTATCTCAGGC-ACCTGTAAATAT---G---A---CATTATTACACCAGTACAACGCTAT--CTTCA----TTGGCTGCCAGTTCAGCAGAG--TCTTCTTCAAGACATTGGTGTTAGTGTATAAAACTGTCTACAACATGACTCCATCCTATCTGC--AGGAACTCATA--ACACCCTAT---GCTCCCTCCAAAACTTTGCAGTCCAATGACCGGAGCCTACTACAAAGGCCAATTAATTACCACCTCATCTATG-------ATTCAATCTT--GACCTCTAGTGTGGTTGGCCATAAACTGTGGAATGATCTACCATGTGAGATCAGACCTTTTGTTAATATCTG---TAACTTTACAATCTAAA---------C-TAAG-AATCACCTT-TT--T-GCAATTTATTACTATTT--AGTCTG-atggctcagcatcacctcaagatttcacagacaagactgaggcactagtgatatctcccaaacaaatggcctctaagctgcacattatgcaacacataattatcatcaaggagaagaataccattcctgttactaaagccaatcatggaggcacatatacatgtatcatcagtgtgcagaggtgccttcatctacattaagaacctgaggagatatctggacaggtagtcgctggattatgttgttcatgccttcataactacaaagctggactactgtaactatctcttctg
gi|3 : atatgtacctgAGTACTAAGACGGCACTTCTACGAG-----------TTC--ACAAAG-ATGTGGTCTGTACCCTTGGAGTGCAGAAGGCTGTCT--TGCTAGTGCAGTTGGATCTATTGGCTGCTTTTGACACTGTACATAATTCACGCTAGCTGCAGATACTCA---AGG---ACCTTGGAATTA-AGACACTGTGCTCATGTGGTTCATGTCCTAG--------TCGGACCAG--A--T--TGTCAA----AGTGAATTGAGCAAAGTCTGGTGCCA-TTGAGTTAAG-CTGCGGTGTCCTCCAGGAATC-GGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCTGG-GG-CCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC---CACATAAATGCTGACGT---TAATGAACTGTATATTAACTTTAAAATC--TATCAGGCCTCTCTTTTAGTCAGT--CCGATGGAGTCTAGCTAGAGGCCAGTTCTA-ACCTTGATGGCTC--AGCATCACCTCAAGATTTCACA-----GAC----AAGACTG-AGGCACTAGTGATATCTCCCA----AACAAA-TGGCCTCTAAGCTGCACATTA------TGCAA-C--AC---A---TAATTATCATCAAGGAGAAGAAT-------ACCATTCCTGTTACTAAAGCCAA------TCATGGAGGCA--------CATA----TA--------CA-T-GTATCATCAGTGTGCAGAGGTGCCTTCATCTACATTAAGAACCTGAG---G------AGATATCTGGACAGGTAGTC--------GCTGGATTATGTTGTTCATGCCTTCATAACTACAAA-------GCTGGACTACTGTAACTATCTCTTCTctgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaataccatgttgtgcattcataatggagtacttactttcatctactagtcatttgttttatgcaacttattttattgttacttaaaaagcctttagagcagtatggaattttcgctttgcaaaattaattcatta
gi|4 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccaacaagagctgtgaactggaccctctgcctacatcccttgtgaagcaagaagtcacaagcttgctcccgtcatcacctctatcatatataaatcacttgagagtggttccttcccaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTCCGTGGAGAGCAGAAGGCTGTCT--TGCTCGTGCAGTTGGACCTATCAGCTGCCTTTGACATTGTAGATCATTCACGCTTGCTGCAAATACTCA---AGG---ACCATAGAATTGAGGACACTGC--TTATGGGGTTCGCGTTATATCTTACCAATTGGACC-C--AAAT--TGTCAACGTGAAGGAGGGA-GCAACGTCTGGTGCCACAGAG-TTGGA-ATGCAGTGTCCC-CA-GGATTCGGTCCTCAAGCCTGTTGTGTTCACCATCCTCACAGCATCCCTAGGGGGCCC-TTCACAGCAAGAACA--AT-GTCTTGTAC---CACATGTATGCTGACGA---TGATGAACTGTATATCACCTTTATAGTC--CAGCAGGTCGCTCTTGTAGTCAGT--CTGATGGAGTCTTGCTTGAGTTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAAAT----CAACACAGAC----AAAACAG-AGGTGTTAGTGATATACTCCA----AACAAA-TTGCTTCTAAGCTTCAC---ATAAATGTACCATT--ACTG-C---ACGT-----------AGAAGACT-----CTATCACTCCTGTTACTATGGCCAA--ATG--------ACCA------------------TGGAGGCACATATATATCATCAGTGAGCAGAAATGCCTTCATCGTCTTTTAGAGCCTGAGCCAGCTGAGGAGATATCTGGTCAGGGAGTC--------GCTGGAATATGTTGTCCATGCCTTCCTAACAACAAA-------GCTGGACTACTGTAACAC-------TCTCTTCTGCGGCTT------AAAGCAGATCCAGAGGCTCCAATCCATCCAGAGGCTCCAATCCATACAAAACGCTGCATCCAGAATCATCTCAGAC-ACCCGAAAATAT---A---ACAGCATTACA---CCAGTA-----TTACG-CTCCCTCCATTGGCTGCTAGTTTAGCAAATAGTCATCTTCTTGACATTGTTGTTGATGCACAAAACTGTCAGCAACATATCTCCACCCTATCTGCATAACAACCTATGCTCCATC---CA--G----------AACTCTGCAGTTCAGTGACCAGAGTCTATTAT-----------AAGTGCCATTCACCACTTCATCTGTGATTCAATCTCGAGT-TTTTGGTGGGGCTGGCCCTTAACTGTGGAATGCTCTACCATGTGACGTCAGAATTGCTGTTAGTCTCTA---TATCTTCA-AATCTAAACGAGATCTTT-TAAA-GATCG-ATC-TG--T-g
gi|21 : GCAGATGGACCTATCGGCTGCCTTTGGCACTGTACATCATCCATACTTGCTGCAAATACTCA---ATG---ACCTTGGAATTAAGGGCACTGTGCT
gi|15 : attttgtacgTGCCTTTGACACTGTATATCATTTACGCTTTCTGCAAATACTCA---AGG---ACCTTTGAATGAAGGGTACTATGCTCATGTGGTTCTTGTCTTATTTTACCAATCGGACC-CAGA--T--TATCAA----AATTAAGGGAGCAAAGTCTGTTGTCACT
gi|5 : --T--TGTCAA----AATGA---------AGTCTGGTGTCTCTGAG-TTGGCCAGT-GGTGTCCCCTAGGGATC-GATCCTTGGGTTTGTTCTGTTCAACATCTACACAGCATCCCTGGGGG-CCCCTTCTCAGAAAGAACACAAT-GTCATGTCC---CACATGTATCCTGACGA---TAATGAACTGGATATCAGCTTTAATGTC--CAGCAAGCCGCTCTTGTAGT-A-----AGATGGAGTCTTGCTTGAGGTCAATTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGGT----CAACACAGAC----AAGGCTG-AAGTGCTAGTGATATCATCCG----AACAAA-TGGCCGCTAAACTGCAT---A------TACAATC--ACTG-C---AAGT--------ATGAGAAGACTCAAT--CAC-----CCGTTACTAAGGCCAAGGGCGCT-GTGTAACCATTGACTGTCACATGACCATGGAGACACA----CATCATCGGTGTGCAGAGGTGCCTTCATCCACCTAAAGAACCTGAGTCAGCTG---AGATATCTGGACAGGTAGTCGCTGTAATG--------TGTTGTCCATGCCTTCATAACAACAAA-------GCTGGACTACTGTAAC---------TCTCTTCTGAGGCTTACCATCAAAGCAGATCCAGCGGCTCCAATCC-TC------------------CAAAACGCCGAAGCCAGAATCATCTCGGGCAAATCGCAAAGATAACA---A---CAATACA---CCAGTA-----CTACG-CTCCCTTCATTGACTGCCAGTTCAGCAAAGAGTTATCTTCAAGACACTGGTGTTAGTGCACAAAACAGTCAGCAACATAACTCCATCCTATCTGC--AG-AATCTATG--CTCCC---TCCAG----------AACTCTGGGGTCCAG-----TGATTAGATT-------------AAGTGCCATTTACCACCTCACCTGTAATTCAGTCTCGAAC-TTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTCCCATGTGATGTAAGAACTGCTGCTAGTCTCTT---TATCTTTA-ACTATTAA---------C-TAAA-GACTC-ATCTTT--T-GCAATTTATTAC-AACT--AGT------C-----AAA---------------AA------------------------------ACTATTTTAAGCAATAA-----TAA---TG-GACTCCTTg
gi|3 : acaggT----CAGTCTTGTCTGTGAAATCTTGAGGTGATGCTGAG--CCATCAAGGTTAGAAC-TGGCCTCT-AGCTAGAC----------T-CCATCGGACTG-ACT-AA----------AAGAGAGGCCT-
gi|14 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccaacaagagctgtgaactggaccctctgcctacatcccttgtgaagcaagaagtcacaagcttgctcccgtcatcacctctatcatatataaatcacttgagagtggttccttcccaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtactaagacggcacttctacgagttcacaaagatgtggtctgtacccttggagtgcagaaggctgtcttgctagtgcagttggatctattggctgcttttgacactgtacataattcacgctagctgcagatactcaaggaccttggaattaagacactgtgctcatgtggttcatgtcctagtcggaccagattgtcaaagtgaattgagcaaagtctggtgccattgagttaagctgcggtgtcctccaggaatcggtcctcgggcctgttctgttcaacatctacacagcatccctggggcccttctcagaaagaacaatgtcttgtaccacataaatgctgacgttaatgaactgtatattaactttaaaatctatcCTAGTGATATCCTTCA-----AACATATGGCCTCTAAACTGCAC---A------TACCATC--ACTGCATGCACGT--------AGGAAAATACT-----CCATCACTCCTGTTACTGAAGCCAA-GGCCTTGGTGTAACCATTGACTGTCACATGATCGTAAAGGCACA-T-ATATTATCAGTATGCAGAGggcactagtgatatctcccaaacaaatggcctctaagctgcacattatgcaacacataattatcatcaaggagaagaataccattcctgttactaaagccaatcatggaggcacatatacatgtatcatcagtgtgcagaggtgccttcatctacattaagaacctgaggagatatctggacaggtagtcgctggattatgttgttcatgccttcataactacaaagctggactactgtaactatctcttctg
gi|17 : CAGATCCAGAGGCTCCAATCCATC------------------CAAAATACTGCAGACAGAATCATCTCAGAT-ATTCGTAAAT-T---G---ACTGCATTACA---TTAGTA-----CTACGCCTTCTCCA-TTGACTGTCTGTTCAGCAAAGAGTCACCTTCAAGACATT
gi|24 : GCTCCAATCCATA------------------CAGAACGCTGCAGCAACAATCATCTCAGGC-ACCCGCAAATAT---GACAA---CATAACA---CCAGTA-----CT
gi|9 : gcgAAACTGTGGAATGCACTACCATGTGACCTCAGAACTGCTGCTAGTCTCTG---TAACTTTG-AATCTACA---------TGTAAACGATT---TG-TT--T-GCAATTCGTGAC-ATCT--AGTCTG-TGC-----GGATGGACTTTATGTCAAGA--------------TT--------------AC--TGTTGGGCAATCA-----TAA---TG-AACTCCTTCTCTTCACCTA-CTAGTCATTTG-T-TTT--ATACAA-----CTT----------------T-TTTT----------A-------TTGT--TATTTA-----------TA--GATT-TTACGCTTTACAAAATA
gi|10 : AGAACTGCTGCTAGTCTCTG---TATCTTGA-AATCTAAA---------C-TG-----------C-T---T-GAAAGTCATTAC-AATT--AGTCTG-TGC-----AGAT--------------GAACTCCAAGTCAAGATT--------------ACTTTGTTGTGCAATCA-----TAA---TG-GACTCCTTGTCTTCACCTA-CTAGTCATTTG-TTTTT--ATACAG-----CTTAGTTTTTT------GTT-ACCT--A---A---A-------TAGC--G-GTTAG-A--CCAATATG--AAAT-TTACGCTTTACAAAATa
gi|22 : AGAACTGCTGCTGCTCTTTGAGATATCTTTC-AATCTAAA---------T-TAAA-GACTC-ATC-TGTTT-GCAGTTCATTAC-AACT--AGCCTG-TGC-----gaatgcattattaatt
gi|20 : gggatgcaatgtttaCTTTA-AATCAAAA---------C-TAAA-GAATC-ACC-TT--TTGCAATTTATTAC-TATT--AGTCTG-CGCTGTTAAAATCTATGTCAA-----GA--------------AT--------------ACCATGTTGTGCATTCA-----TAA---TG-GAGTACTTg
gi|11 : TC-TT--T-GAAATATATTAC-AAAT--ATTCTG-CGC-----AGAT--------------GA--------------CTTCTAAGTCAAGATAACTATGTTGTGTAATTTGATCGTAA---TG-GACTTCTGATCTTCATCTA-CTAGTCAATTG-T-TTT--AAACAA-----CTAA------T------TGT-ATTTTTATTTG---A-------TAGC--G-TTTAG-A--CCAATATA--GATT-CTACGCTTTACAAAATA-AA-
gi|26 : ttTCTTTAC-AAATGAACTCTAATTC-----AAA----------------A--------------TT--------------ACTATGTTGTGCAATCA-----TAA---TG-AACTCCTTTTCTTgt
gi|18 : cgA--------------TT--------------ACTATGTTGTGCAACGG-----TAA---TG-GACTCC------TTATCCT-CTAGTCATTTG-TTTTC--ATACAA-----CTTATTTTATT------GCT-ATTT--A---A---A-------TAGC--G-TTTAG-A--GCAATTTAACGATGATCACACTATATA---TATAA-
gi|2 : T--------------ACCATGTTGTGCATTCA-----TAA---TG-GAGTACTTACTTTCATCTA-CTAGTCATTTG-T-TTT--ATGCAA-----CTTA------TTTTATTGTT-ACTT--A---A---A-------AAGC--C-TTTAG-A--GCAGTATG--GAAT-TTTCGCTTTGCAAAAT-TAATTCATagagt
gi|16 : atatgtacctgagttgaacgagaaggttttatcagcacagaaacatacctacttcagtgagaacaatatactggagctattctaaagtgcttaccgacagtggtatagtaccgatactgcacttctgctcgttcaaaacgatgtagagcagaaaggtgtcttgctagtgcagttggactatcggctgccttggacactatagataattcaggattgctgcaagtactcaaggatctttgaatcaaggacactgtgctcatttagttggcgtcctatcttaccaatcgaatccaggttgtcaaagtaaagggagcaaaatcttttatcaccaagttgagccgcagtgtccccctaagatttgtcatcgggcctgttctgttcaacgtgtacacattatctttggcacccttttaaaaagacaatcgtcttgtacgctaatgcttatgttgacgaatttcaagatttgtaatgaagtcatcgggctgctgttgtagtaaatatcagattgaatcttgatgaggttaggttaagacccgaatggctcctagtcactttaaatcaacgcaagcaagactgatgtgctagtgatatcctccaaactaatggccgctaaactgcacataccatcaatgcaagcaggaaaactcaatcactcctattactaatgccaagggtgtatgtgtaagcatttactgtcaaatgaccgtgacaacacatatatcatcaatatacagagatgccttcatccaccttaagaacctgcgccagctgaggagatatctgaacagggagtcgctggagtgtattttccatgccttcataacaacaaagttgcactactgtaacttttccgcctgtggtttacaattaaaacagatccagatgtttcaatcaatccaaatcgttgtatccagaattatctcaggcacctgtaaatatgacattattacaccagtacaacgctatcttcattggctgccagttcagcagagtcttcttcaagacattggtgttagtgtataaaactgtctacaacatgactccatcctatctgcaggaactcataacaccctatgctccctccaaaactttgcagtccaatgaccggagcctactacaaaggccaattaattaccacctcatctatgattcaatcttgacctctagtgtggttggccataaactgtggaatgatctaccatgtgagatcagaccttttgttaatatctgtaactttacaatctaaactaagaatcacctttttgcaatttattactatttagtctgctgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaaCTATAT-GTACAATC-------AACCATGAGACTCCTTGTCTT-AT-CATCTAGTCATTTGGTTTTT--ATACAA-----CTTA------T--------T-ATTT--A---A---AATTTTATTGGT--A-TTAAATA--GCG-TATG--GATT-TTACGCTTTATAAAATTTTA-TTATta
gi|19 : taaatatA---TG-GACTCCTTGTCTT-AT-CATCTAGTCATTTG-GTTTT--ATACAA-----CTTA------T------TTT-ACTT--A---TTTTA-------TTGTATT-TTTAA-ATAGCG-TTTG--GATT-TTACGCTTTATAAAATtat
gi|25 : accTAGCCATCTG-TTTTTTTATATAAGTGATTTTA------T------TGTTATTT--A---A---A-------TAGT--G-TTTAG-A--GCAGTGTG--GATT-Ttttatta
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|12 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCATGATAACAAAGGTGCACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGTGCTCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTCCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|13 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCAATGATAACAAAGGTGACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGCTGCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTACCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|23 ): CATCAGAGAGATCTGGATGACAGGTTAGAAACTTTTTTGCAGAAAGTTACACGAATTTGCTGCTCCATTACATGTGACAATCACAATCCAC
Unaligned ( gi|27 ): GTCAACAAGCTGCTTGGTAGGAACTCCACTCCA
Alignments
lowQualScore : 1111111111111 1111111111111111111111111111111111111111111111
lowQualScore : 22222 22222222222 111 2222 222 555555 55555555 44444444444444 111111 22222222 1111 1 11 1111 111 111 11 2222222222222 111111111 111111 33333333 1111111111111 555555555 22222 444444444444444444 22 55555555555555555555555555555555 11 11111 111 111 222222222 11 11111 0000000000000000000000000000000000000000000000 11111 11111 11111 2222222222222222 111111 111111111111 1111 1
lowQualScore : 1 11 11111 0 66666666666 1 1 444 8 8888 22 0 2 1 0 3 666 2 3 333333 2 33 2 55555555 2 33 1 2 4 0 2 1 33 2 77777777777777 3 99 444444 0 0 3 2 44444444 0000 3 8 0 8 0 11 8 4444 2 444 0 8 3 111 3 6 8 11 3 0 0 9999999999999 6 1 444444444 2 777777 3 2 11111111 3 1 3 1 1 5 1 2 99 0 1 6666666666666 6 222222222 0 4 66666 0 999999999999999999 1 6 88 6 99 1 1 0 4 0 11111111111111111111111111111111 4 66 3 222 3 4 33 0 88888 3 4 4 0 0 77 2 77 000 000 5 555555555 5 777 66 5 5 1 44444 0000000000000000000000000000000000000000000000 00000 4 3 7 7 55 99 66 11111 11111 4444444444444444 4 222222 777777777777 9999 4 4444 99 0
lowQualScore : . .. ..... . ........... . . ... . .... .. . . . . . ... . . ...... . .. . ........ . .. . . . . . . .. . .............. . .. ...... . . . . ........ .... . . . . . .. . .... . ... . . . ... . . . .. . . . ............. . . ......... . ...... . . ........ . . . . . . . . .. . . ............. . ......... . . ..... . .................. . . .. . .. . . . . . ................................ . .. . ... . . .. . ..... . . . . . .. . .. ... ... . ......... . ... .. . . . ..... .............................................. ..... . . . . .. .. .. ..... ..... ................ . ...... ............ .... . .... .. .
lowQualScore : 0 66 66666 6 88888888888 4 0 000 8 0000 88 2 5 0 2 2 222 5 2 777777 0 22 5 00000000 0 00 2 5 6 8 8 0 22 8 22222222222222 8 22 444444 2 1 2 5 88888888 7777 7 0 0 0 8 00 0 0000 8 000 8 8 2 888 8 0 0 00 2 8 7 3333333333333 7 0 333333333 5 777777 7 2 55555555 3 0 2 5 0 2 0 2 22 6 0 2222222222222 0 000000000 8 2 55555 2 222222222222222222 0 7 88 7 66 4 4 8 0 2 88888888888888888888888888888888 0 55 2 555 2 5 55 2 55555 2 5 2 2 2 55 2 99 000 000 0 000000000 0 666 77 0 0 1 33333 9999999999999999999999999999999999999999999999 00000 0 6 4 6 00 00 11 11111 11111 3333333333333333 4 888888 999999999999 4444 4 8888 22 0
consensus : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----CAGCTCTTGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAAGGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGGC-ATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATACG------TACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACCC--A--T--TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-C--ACATGTATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTGCA---A-GT--AGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGGGCGC-T-GTGTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTG--GT----AATATGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAAC---TTC-TCTCTCTTCTGCGGCTTACCA-TCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAAC-ATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCT-C---CNCCN-GAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCCA--T--TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCT---GCTAGTCTCTG---TATCTTTA-AATCTAAAC---------TAAA-GACTCATC--TTT-GCAATTCATTAC-AACTAGTCTGCGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA------TT-T------T-AT------TTA---AA-------TAGCGTTT----AG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
Reference ( family-3621 ) : NAACAAGAGCTGTGAACTGGANCCTCTGCCTACATCCCTC----GTGAAGCAAGAAGTCA-----CAGCNCTTGCTCCCGTCATCACCTCTNTCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCANCATC-TT-CAAAGGAGCTATTGTGACACCACTTCTGAAAAAGGNTTCACTAGACCCTG-C-ATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATACATNTATGTATCCAAGTCGATCGAGAAGGTTGTAGCAGCACAGATAC-------TGCCTACTTCGNTGAGAACAATCTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACCGAGACGGCGCTTCTGCGAGTTNACANTGACGTG-------------GTNTGTGCCCTTGGAGAGCAGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACCC--A--T--TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-C--ACGTGTATGCTGACGA---TAATGAACTGTATATCANCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAGCTGCACA------T------AC-CATCACTGNA---A-GT--AGGAGAAGACT----CCATCACTCCTGTTACTAAGGCCAAGGGCGT-T-GTGTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGNAGTCGCTG-AGTGCTGGATATGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAAC---TTC-TCTCTCTTCTGCGGCTTA-CA-TCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGAC-GC-ATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACTGTCAGCAACATAACTCCATCCTATCTGC---AG-AA-----------CCTATG---C---CACCC-GAACTCTGCGGTCCAGTGACCGGAGTCTATTACAAGTGCCA--T--TTACCACNTCACCTGTGATTCAATCTCGAGNTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCT---GCTAGTCTCTG---TATCTTTA-AATCTAAAC---------TAAA-GATTCATC--TTT-GCAATTCATTAC-AACTAGTCTGCGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTGTCTTCATCCACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA------TN-T------T-AT------TTA---AA-------TAGCGTTT----AG-AGCGA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
gi|1 : AACTAGAACTGTGAACTGGACCCTCTGCCTAT-TCCCTT----GTGAAGCAAGAAGTCATGGTGCAGATCTTGCTCTCTTCATAACTTCTATCATAAATAAGTTACTTGAGAGTGGTTCTT---TCCCAAAATCGTT-TGAACGAGCTATTGTTACTCCACTTATGAAAAAGGCTTCACTAGATCCTGGC-ATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCAGA------TGCATGCAAATTGACTGAGAAGTTTGTAGAAGTGCAAATACATAGATGTACCTAACTCAGTGAGATCAATGTACTGGAGCCATTCCGAAGTGCTTTACGTCAAGGCCATAGTACTGAGACGGTGCTCTTGTGAGGTAACGTTGACATA-------------GTCTGTGTCATTGAAGAGTGGAAGGTTGTCT--TGCTAGTGCAGTAGGACCTATTGGCTGCCTTTAATATCGTAGATCATTCACGCTTGCTGCAAATAC------TCACAAACCTTGGAATTACGGACACTGTGTTCATGTGGTTCGCGTCCGAGCTTACGAATCGTACCT--A--T--TGTCAAAATGAGGG---GTGCAAAGTCTGGTGCCACTTGATTGGGATTCGGTGTCTCGCAAGGATTGCTCCTTGGGCTTGTTATATTCAGCATTTACACGGCATCCCC-AACAGTCA-TTCTCAGGAAAAACG--AT-GTTTTGTAC-A--ACATGTATGCTGACGA---TAATGAACTGTATATCAGTTTAAAAGTCCAGCAGCTCGCTCTTGTAGTCAGT--CAGATGGAATCTTGCTTGAGGTCAGTTCAA-ACCTTGGTGGCTC--AGCATCTCCTCAAGATCAGTGTTGACAAAACTTAGGTGCTAGTGATATCCTTCATAGAATTGGCCTCTAAACTGCACA------T------GC-CATCACTGAA---A-GT--AGGAGAAGACTAGTGCCACTATTACTGTTACTAAAGCCAAGGGTGC-TGGTGAAACCATTAACTGCCATAAAACTATGGAGGCAC--AAGTATCAAAAGTGTGCAGAGGTAGCTTAATCCACCTTAAGAACCTGAGCCAGCTGAGCAGATATCTGGACAGGGAGTCG---------------TGTTGTCCATGCCTTCATAAC----AAGCCCGACTAATGTACCTCTTTCTTTTCTCTTCTGTGGCTTACCA-TCAAAGCAGATCCAGAAGCTCTAATCCATC------------------CAAAACGCTAAAGCAAGTATTATCGCAGGC-CCCCGCAAATATGA---C-ATTACTCCAGTACTA--CT-------TTGCCTGCCAGTTCAGCAAAGACTCATCTTCGAGACATTGGTGTTAAAGTATAAAACATTCATCAACATGACTCCATCCTATCTGC---AGTAA-----------CTCATA---A---CATCT-GAACTTTGCGGTCTAA-----AGAGCCTACTACAATTGCCA--T--TT---------------ATTCAATCTCAAGATTTTAGCGTAACTGGTCCTAAACTGCAAAAGGCTCTACCATATCATATC--AAAACTGCT---GCTAGTCTCTG---TATCTTTA-AATCTAAAT---------TAAA-GACTAATC--TGT-GCAATTCATTAC-AACTAGTCTGTGC-----AAAT--------------GA--------------TT--------------ACTATGTTGTGTAAT-----CT-TAATG-GACTCCTTTTCTTTATTCACTAGTCGTTTG-TGTCT--ATACAA-----CT-----TA------CG-G------T-AT------TTA---AA-------TAGCCTTT----AA-AGCAA--TTTGGATTTTACGCTTTACAAAGTATAA-TCAT
gi|10 : t--AGAACTGCT---GCTAGTCTCTG---TATCTTGA-AATCTAAAC---------TG-------------CTT-GAAAGTCATTAC-AATTAGTCTGTGC-----AGAT--------------GAACTCCAAGTCAAGATT--------------ACTTTGTTGTGCAAT-----CA-TAATG-GACTCCTTGTCTTCACCTACTAGTCATTTG-TTTTT--ATACAG-----CT-----TAGTTTTTTG-T------T-AC------CTA---AA-------TAGCGGTT----AG-ACCAA--TATGAAATTTACGCTTTACAAAAT
gi|11 : TC--TTT-GAAATATATTAC-AAATATTCTGCGC-----AGAT--------------GA--------------CTTCTAAGTCAAGATAACTATGTTGTGTAATTTGATCG-TAATG-GACTTCTGATCTTCATCTACTAGTCAATTG-TTTTA--A-ACAA-----CTAATTGTA------TT-T------TTAT------TTG---A--------TAGCGTTT----AG-ACCAA--TATAGATTCTACGCTTTACAAAATA-AA-gaatgcattattaatt
gi|14 : ttCTAGTGATATCCTTCAAACATATGGCCTCTAAACTGCACA------T------AC-CATCACTGCATGCACGT--AGGAAAATACT----CCATCACTCCTGTTACTGAAGCCAAGGCCTT-G-GTGTAACCATTGACTGTCACATGATCGTAAAGGCAC--ATATATTATCAGTATGCAGAGgt
gi|15 : TGCCTTTGACACTGTATATCATTTACGCTTTCTGCAAATAC------TCAAGGACCTTTGAATGAAGGGTACTATGCTCATGTGGTTCTTGTCTTATTTTACCAATCGGACCCAGA--T--TATCAAAATTAAGG---GAGCAAAGTCTGTTGTCACTG
gi|16 : CTATAT-GTACAAT-----CAACCATGAGACTCCTTGTCTT-ATCATCTAGTCATTTGGTTTTT--ATACAA-----CT-----TA------T---------T-AT------TTA---AAATTTTATTGGTATTA----AATAGCG---TATGGATTTTACGCTTTATAAAATTTTA-TTAT
gi|17 : taaatatCAGATCCAGAGGCTCCAATCCATC------------------CAAAATACTGCAGACAGAATCATCTCAGAT-ATTCGTAAAT-TGACTGC-ATTACATTAGTACTACGCCTTCTCCATTGACTGTCTGTTCAGCAAAGAGTCACCTTCAAGACATTtat
gi|18 : A--------------TT--------------ACTATGTTGTGCAAC-----GG-TAATG-GACTCCTT------ATCCTCTAGTCATTTG-TTTTC--ATACAA-----CT-----TA------TT-TTATTGCT-AT------TTA---AA-------TAGCGTTT----AG-AGCAA--T
gi|19 : ATG-GACTCCTTGTCTT-ATCATCTAGTCATTTG-GTTTT--ATACAA-----CT-----TA------TT-T------T-AC------TTATTTTA-------TTGTATTTTTAAAT-AGCG---TTTGGATTTTACGCTTTATAAAATttaacgatgatcacactatatatataaagagt
gi|2 : accTATGTACCTGAGTTGAACGAGAAGGTTTTATCAGCACAGAAACA------TACCTACTTCAGTGAGAACAATATACTGGAGCTATTCTAAAGTGCTTACCGACAGTGGTATAGTACCGATACTGCACTTCTGCTCGTTCAAAACGATGT----------------------------AGAGCAGAAAGGTGTCT--TGCTAGTGCAGTTGGAC-TATCGGCTGCCTTGGACACTATAGATAATTCAGGATTGCTGCAAGTAC------TCAAGGATCTTTGAATCAAGGACACTGTGCTCATTTAGTTGGCGTCCTATCTTACCAATCGAATCC--AGGT--TGTCAAAGTAAAGG---GAGCAAAATCTTTTATCACCAAGTTGAGCCGCAGTGTCCCCCTAAGATTTGTCATCGGGCCTGTTCTGTTCAACGTGTACACATTATCTTT-GGCA-CCC-TTTT-AAAAAGA-CA--ATCGTCTTGTACGCTAATGCTTATGTTGACGAATTTCAAGATTTGTA----A----TGAAGTC-ATCGGGCTGCTGTTGTAGTAAATATCAGATTGAATCTTGAT-GAGGTTAGGTTAAGACCCGAATGGCTCCTAG--TCACTTTAA-ATCAACGCAAGCAAGACTGATGTGCTAGTGATATCCTCCAAACTAATGGCCGCTAAACTGCACA------T------AC-CATCAATGCA---A-GC--AGGAAAA--CT----CAATCACTCCTATTACTAATGCCAAGGGTGTAT-GTGTAAGCATTTACTGTCAAATGACCGTGACAACAC--ATATATCATCAATATACAGAGATGCCTTCATCCACCTTAAGAACCTGCGCCAGCTGAGGAGATATCTGAACAGGGAGTCGCTGGAGTG-------TATTTTCCATGCCTTCATAACAACAAAGTTGCACTACTGTAAC---TTT-TC---CGCCTGTGGTTTA-CAATTAAAACAGATCCAGATGTTTCAATCAATC------------------CAAATCGTTGTATCCAGAATTATCTCAGGC-ACCTGTAAATATGAC-ATTATTACACCAGTACAACGCTATCTTCATTGGCTGCCAGTTCAGCA--GAGTCTTCTTCAAGACATTGGTGTTAGTGTATAAAACTGTCTACAACATGACTCCATCCTATCTGC---AG-GAACTCATAACACCCTATG---CTCCCTCCA-AAACTTTGCAGTCCAATGACCGGAGCCTACTACAAAGGCCAATTAATTACCACCTCATCTATGATTCAATCTTGA-CCTCTAGTGTGGTTGGCCATAAACTGTGGAATGATCTACCATGTGAGATC--AGACCTTTT---GTTAATATCTG---TAACTTTACAATCTAAAC---------T-AA-GAATCACCTTTTT-GCAATTTATTACTATTTAGTCTGCtttatta
gi|2 : aT--------------ACCATGTTGTGCATT-----CA-TAATG-GAGTACTTACTTTCATCTACTAGTCATTTG--TTTT--ATGCAA-----CT-----TA------TT-T------T-ATTGTTACTTA---AA-------AAGCCTTT----AG-AGCAG--TATGGAATTTTCGCTTTGCAAAAT-TAATTCATtgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaataccatgttgtgcattcataatggagtacttactttcatctactagtcatttgttttatgcaacttattttattgttacttaaaaagcctttagagcagtatggaattttcgctttgcaaaattaattcatta
gi|20 : atatgtacctgagttgaacgagaaggttttatcagcacagaaacatacctacttcagtgagaacaatatactggagctattctaaagtgcttaccgacagtggtatagtaccgatactgcacttctgctcgttcaaaacgatgtagagcagaaaggtgtcttgctagtgcagttggactatcggctgccttggacactatagataattcaggattgctgcaagtactcaaggatctttgaatcaaggacactgtgctcatttagttggcgtcctatcttaccaatcgaatccaggttgtcaaagtaaagggagcaaaatcttttatcaccaagttgagccgcagtgtccccctaagatttgtcatcgggcctgttctgttcaacgtgtacacattatctttggcacccttttaaaaagacaatcgtcttgtacgctaatgcttatgttgacgaatttcaagatttgtaatgaagtcatcgggctgctgttgtagtaaatatcagattgaatcttgatgaggttaggttaagacccgaatggctcctagtcactttaaatcaacgcaagcaagactgatgtgctagtgatatcctccaaactaatggccgctaaactgcacataccatcaatgcaagcaggaaaactcaatcactcctattactaatgccaagggtgtatgtgtaagcatttactgtcaaatgaccgtgacaacacatatatcatcaatatacagagatgccttcatccaccttaagaacctgcgccagctgaggagatatctgaacagggagtcgctggagtgtattttccatgccttcataacaacaaagttgcactactgtaacttttccgcctgtggtttacaattaaaacagatccagatgtttcaatcaatccaaatcgttgtatccagaattatctcaggcacctgtaaatatgacattattacaccagtacaacgctatcttcattggctgccagttcagcagagtcttcttcaagacattggtgttagtgtataaaactgtctacaacatgactccatcctatctgcaggaactcataacaccctatgctccctccaaaactttgcagtccaatgaccggagcctactacaaaggccaattaattaccacctcatctatgattcaatcttgacctctagtgtggttggccataaactgtggaatgatctaccatgtgagatcagaccttttgttaatatctgtaactttacaatctaaactaagaatcacctttttgcaatttattactatttagtctgctgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaaCTTTA-AATCAAAAC---------TAAA-GAATCACC--TTTTGCAATTTATTAC-TATTAGTCTGCGCTGTTAAAATCTATGTCAA-----GA--------------AT--------------ACCATGTTGTGCATT-----CA-TAATG-GAGTACTTta
gi|21 : GCAGATGGACCTATCGGCTGCCTTTGGCACTGTACATCATCCATACTTGCTGCAAATAC------TCAATGACCTTGGAATTAAGGGCACTGTGCT
gi|22 : attttgtacgATGCAATGTTTAAGAACTGCTGCTGC---TCTTTGAGATATCTTTC-AATCTAAAT---------TAAA-GACTCATCTGTTT-GCAGTTCATTAC-AACTAGCCTGTGC-----
gi|24 : gggGGCTCCAATCCATA------------------CAGAACGCTGCAGCAACAATCATCTCAGGC-ACCCGCAAATATGACAAC-ATAACACCAGTACTg
gi|25 : gcTAGCCATCTG-TTTTTTTATATAAGTGATTT-----TA------TTGT------T-AT------TTA---AA-------TAGTGTTT----AG-AGCAG--TGTGGATTT
gi|26 : cacttagA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-AACTCCTTTTCTTatt
gi|3 : cgtctttacaaatgaactctaattcaaaAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----CAA-GCTTGCTCCCGTCATCACCTCTATCATATATAAATCACTTGAGAGTGGTTCCT---TCCCAAC
gi|3 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccAGTACTAAGACGGCACTTCTACGAGTTCACAAAGATGTG-------------GTCTGTACCCTTGGAGTGCAGAAGGCTGTCT--TGCTAGTGCAGTTGGATCTATTGGCTGCTTTTGACACTGTACATAATTCACGCTAGCTGCAGATAC------TCAAGGACCTTGGAATTAAG-ACACTGTGCTCATGTGGTTCATGTCCTA--------GTCGGACCAG-A--T--TGTCAAAGTGAATT---GAGCAAAGTCTGGTGCCATTGAGTTAAGCTGCGGTGTCCTCCAGGAATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGG-CCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-C--ACATAAATGCTGACGT---TAATGAACTGTATATTAACTTTAAAATCTATCAGGCCTCTCTTTTAGTCAGT--CCGATGGAGTCTAGCTAGAGGCCAGTTCTA-ACCTTGATGGCTC--AGCATCACCTCAAGATT-TCACAGACAAGACTGAGGCACTAGTGATATCTCCCAAACAAATGGCCTCTAAGCTGCACA------TTATGCAACACATAATTATC---A--TCAAGGAGAAGAAT------ACCATTCCTGTTACTAAAGCC---------------AATCATGGA--GGCACAT----------ATAC--ATGTATCATCAGTGTGCAGAGGTGCCTTCATCTACATTAAGAAC---------CTGAGGAGATATCTGGACAGGTAGTCGCTG-GAT------TATGTTGTTCATGCCTTCATAACTACAAAGCTGGACTACTGTAA------C-TATCTCTTCTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtactaagacggcacttctacgagttcacaaagatgtggtctgtacccttggagtgcagaaggctgtcttgctagtgcagttggatctattggctgcttttgacactgtacataattcacgctagctgcagatactcaaggaccttggaattaagacactgtgctcatgtggttcatgtcctagtcggaccagattgtcaaagtgaattgagcaaagtctggtgccattgagttaagctgcggtgtcctccaggaatcggtcctcgggcctgttctgttcaacatctacacagcatccctggggcccttctcagaaagaacaatgtcttgtaccacataaatgctgacgttaatgaactgtatattaactttaaaatctatcaggcctctcttttagtcagtccgatggagtctagctagaggccagttctaaccttgatggctcagcatcacctcaagatttcacagacaagactgaggcactagtgatatctcccaaacaaatggcctctaagctgcacattatgcaacacataattatcatcaaggagaagaataccattcctgttactaaagccaatcatggaggcacatatacatgtatcatcagtgtgcagaggtgccttcatctacattaagaacctgaggagatatctggacaggtagtcgctggattatgttgttcatgccttcataactacaaagctggactactgtaactatctcttctg
gi|4 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccaacaagagctgtgaactggaccctctgcctacatcccttgtgaagcaagaagtcacaagcttgctcccgtcatcacctctatcatatataaatcacttgagagtggttccttcccaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTCCGTGGAGAGCAGAAGGCTGTCT--TGCTCGTGCAGTTGGACCTATCAGCTGCCTTTGACATTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCATAGAATTGAGGACACTG--CTTATGGGGTTCGCGTTATATCTTACCAATTGGACCC--AAAT--TGTCAACGTGAAGGAGGGAGCAACGTCTGGTGCCACAGAGTTGGAATGCAGTGTCCCC-AGGATTCGGTCCTCAAGCCTGTTGTGTTCACCATCCTCACAGCATCCCTAGGGGGCCC-TTCACAGCAAGAACA--AT-GTCTTGTAC-C--ACATGTATGCTGACGA---TGATGAACTGTATATCACCTTTATAGTCCAGCAGGTCGCTCTTGTAGTCAGT--CTGATGGAGTCTTGCTTGAGTTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAAATCAACACAGACAAAACAGAGGTGTTAGTGATATACTCCAAACAAATTGCTTCTAAGCTTCACATAAATGT------AC-CATTACTGCA---C-GT-----AGAAGACT----CTATCACTCCTGTTACTATGGCCAAA------------------TGAC-----------CATGGAGGCACATATATATCATCAGTGAGCAGAAATGCCTTCATCGTCTTTTAGAGCCTGAGCCAGCTGAGGAGATATCTGGTCAGGGAGTCGCTG-------GAATATGTTGTCCATGCCTTCCTAACAACAAAGCTGGACTACTGTAA------C-ACTCTCTTCTGCGGCTT-------AAAGCAGATCCAGAGGCTCCAATCCATCCAGAGGCTCCAATCCATACAAAACGCTGCATCCAGAATCATCTCAGAC-ACCCGAAAATATAACAGC-ATTACACCAGTATTACGCTCCCTCCATTGGCTGCTAGTTTAGCAAATAGTCATCTTCTTGACATTGTTGTTGATGCACAAAACTGTCAGCAACATATCTCCACCCTATCTGCATAAC-AA-----------CCTATGCT-C---CATCCAGAACTCTGCAGTTCAGTGACCAGAGTCTATTATAAGTGCCA--T--TCACCACTTCATCTGTGATTCAATCTCGAGTTTTTGGTGGGGCTGGCCCTTAACTGTGGAATGCTCTACCATGTGACGTC--AGAATTGCT---GTTAGTCTCTA---TATCTTCA-AATCTAAACGAGATCTTTTAAA-GATCGATC--T
gi|5 : --T--TGTCAAAATGAAG------------TCTGGTGTCTCTGAGTTGGCCAGTGGTGTCCCCTAGGGATCGATCCTTGGGTTTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCCCTTCTCAGAAAGAACACAAT-GTCATGTCC-C--ACATGTATCCTGACGA---TAATGAACTGGATATCAGCTTTAATGTCCAGCAAGCCGCTCTTGTAGTAAG------ATGGAGTCTTGCTTGAGGTCAATTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGGTCAACACAGACAAGGCTGAAGTGCTAGTGATATCATCCGAACAAATGGCCGCTAAACTGCATA------T------AC-AATCACTGCA---A-GT--ATGAGAAGACT----CAATCA--CCCGTTACTAAGGCCAAGGGCGC-T-GTGTAACCATTGACTGTCACATGACCATGGAGACAC----ACATCATCGGTGTGCAGAGGTGCCTTCATCCACCTAAAGAACCTGAGTCAGCT---GAGATATCTGGACAGGTAGTCGCT---GT----AATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAA---------CTCTCTTCTGAGGCTTACCA-TCAAAGCAGATCCAGCGGCTCCAATCC-TC------------------CAAAACGCCGAAGCCAGAATCATCTCGGGCAAATCGCAAAGATAACAAC-AATACACCAGTACTACGCTCCCTTCATTGACTGCCAGTTCAGCAAAGAGTTATCTTCAAGACACTGGTGTTAGTGCACAAAACAGTCAGCAACATAACTCCATCCTATCTGC---AG-AA-----------TCTATGCTCC---CTCCA-GAACTCTGGGGTCCAGTGATTAG-----ATT--AAGTGCCA--T--TTACCACCTCACCTGTAATTCAGTCTCGAACTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTCCCATGTGATGTA--AGAACTGCT---GCTAGTCTCTT---TATCTTTA-ACTATTAAC---------TAAA-GACTCATCT-TTT-GCAATTTATTAC-AACTAGT-----C-----AAA---------------AA------------------------------ACTATTTTAAGCAAT-----AA-TAATG-GACTCCTTgt
gi|6 : acaggAACAAGAGCTGTAAAGTGGAA--TCTGCCTACATCCCTTAATTGTGAAGCAAGAAGTCA-----TAGCCTTTGCTCCCATCATCACCTGTTTCATAAATAATCCACTTAAGAGTGGTTCCT---TCCCA-CGTCTTT-CAAAGGAGTTATTGTAACACCACTTCTGAAAAAGGCTTCACTAGAGCCTG-CTATACCAAAGAACTACTGGCTAGTGTCTAACCTTGCATACATGTATGTATCCAAGCCGTTTGGAAAGGTTGTAGCAACACAGATACG------TGCCTACTTCAATGAGAGCAATCTAATGGAGCCACTCCAAAGTGCTTACCGTCAAGGGCATAGTACAGAGACGGCACTTCTGTGAGTTCACAATGATGTGGTACATTGTACATGTATGTGCCCTTGGAGAGCGGAAGACTGTCTAATGCTAATGTAGTTGGACCTATTGGCTGCTTTTGACAAAGTAGGTCATTCACG--------------------TCAAGGACCTTAGAAATAAGGACACTGTGCTCATGTGGTTCGCATCCTATCTTACAAATCGGACCC--A--GAATGTCAAGGTGAAGG---GAGCAAAGTCGGGTGCCACTGAGTTAGGCTGCAGTGTCTGATAGGGGCTGGACCTCGGGCTTGT
gi|7 : taagcaccagcattacaaatgtgtgttgcatgataacacagttgacagtaaacagcctttcagagtggtcaacaagctgcttggtaggaactctaccactccactgcttgtcgacaattaaattaccatcagatctggctggcatgtttagtgaatttttgtgcaaaaccttgtacgaattcgcagctctattacatatgacaatcacaatctacatgtcgacccatgtactcggtgataatacaatgtgtaactgaggtcgtctgccAACAAGAGCTGTGAACAGGACCCTATGCCTACA----------------------GTC-----------CTTGCTCCCATCATCACTTCCATCATAATTAAGTCACTTGAGAGTGGCTCCTAATTCTCACCATC-TTTCAAAG---CTATTGTGACATCACTTCTGGAAAAGGTTTCACTAGACCC------------AGA----CAGGTCTGTGTCTAACCTTTCATA------TGTATCCATATTGATTGAGAAGTCTGTAGCAGCACAAATA--------TACATACCTCGCTGAAAACAGTCTGCTGGAGACATTCCAAAGTGCTTACCATAAAGGGCATAGTACTG-GACGGCACTTCTGCGAGTTAACAACGATGTG-------------GTATGTGCCCTTGGAGACCAGGAGGCTGTCT--TGCTAATGCAATTTGACCTATCGACTGGCTTTGACACTGTAGATCATTCACACTTGCCGCAAATACTAATTTTAAATGACCTTGGAATTAAGGACG-------CA-GTGGTTTGCGTC
gi|8 : cgtagttccaatacatgtggcagtcacaatccacttgttgacctgaccagtattcggtgatgaaactggactccatttccgacgtgttactataaatgaggtcacaaagttaattaggtcatctgccAACAAGAGCTATCAACTTGAACCTCTACCTAAATTCTTC----GTGAAGCAAGGCGTCA-----CAGCTCTTGTTCCCGTCATCACTGCTCTAATGAATAAGTGACTTTAAAGTGGTTCCT---TCCAAACATT-GTACAAAAGAGCTATTGTGACACCATTTATGAGAAAGGGTTAACCAGACCCTGAC-ATACCAAA-AACTACAGGC
gi|9 : acactcatcaattcagctaagctccagtattacaggtgcatggtaacaaaggtggcagtaagcagcttttcaaaatggtcaacatgcatcttggtagaaactccactactccatcatctgctgacatatttaccatcagatctggctggcatacttagtgactcttttgtgcagaaatctatgctaagtcgcagctccatagcatgtgacaatcacaatgcacttattgacccaccagcactctgtgatgaaactgtactcaatcatatccatcatgttagtgaggatgaggtcacacaattgattacgccatctgccAAACTGTGGAATGCACTACCATGTGACCTC--AGAACTGCT---GCTAGTCTCTG---TAACTTTG-AATCTACATG--------TAAACGATT--TG--TTT-GCAATTCGTGAC-ATCTAGTCTGTGC-----GGATGGACTTTATGTCAAGA--------------TT--------------AC--TGTTGGGCAAT-----CA-TAATG-AACTCCTTCTCTTCACCTACTAGTCATTTG--TTTT--ATACAA-----CT-----TT------TT-T------T-AT------T------------------GTT------------ATTTATAGATTTTACGCTTTACAAAATA
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCATGATAACAAAGGTGCACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGTGCTCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTCCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|13 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCAATGATAACAAAGGTGACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGCTGCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTACCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|23 ): CATCAGAGAGATCTGGATGACAGGTTAGAAACTTTTTTGCAGAAAGTTACACGAATTTGCTGCTCCATTACATGTGACAATCACAATCCAC
Unaligned ( gi|27 ): GTCAACAAGCTGCTTGGTAGGAACTCCACTCCA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111
lowQualScore : 1111 333333333333 111 222222 1 3333333 33333333 44444444444444 111111 2222222222 1111 11 11 11 111 111 11 2222222222222 11111 111111 333333333333 33 55555555555 444444444444444444 4444444444444444444 22 11 1 111 111 11 11111 0000000000000000000000000000000000000000000000 11111 11111 11111 4444444444444444444444444444444444 1111111 1
lowQualScore : 11 7777 0 111111111111 1 1 444 0 000000 2 0 1 0 0 3 66 2 3 0000000 2 1 1 2 11111111 0 1 1 0 1 77777777777777 3 0 99 444444 0 0 2 1111111111 0000 3 11 8 0 11 8 8 11 444 0 8 3 111 3 6 8 11 3 0 9999999999999 6 6 77777 2 555555 0 000000000000 1 3 1 1 5 1 2 99 0 5 00 4 1 11111111111 4 3 2 0 999999999999999999 1 6 8 44 6 1 0 1 0 8888888888888888888 33 11 1 3 00 22 33 0 0 777 2 0 0 0 0 66 2 77 000 5 5 0 5 3 4 88 5 5 1 44444 0000000000000000000000000000000000000000000000 00000 4 3 1 2 1 99 66 11111 11111 777 0000000000000000000000000000000000 777 4444444 4 1 888 99 0
lowQualScore : .. .... . ............ . . ... . ...... . . . . . . .. . . ....... . . . . ........ . . . . . .............. . . .. ...... . . . .......... .... . .. . . .. . . .. ... . . . ... . . . .. . . ............. . . ..... . ...... . ............ . . . . . . . .. . . .. . . ........... . . . . .................. . . . .. . . . . . ................... .. .. . . .. .. .. . . ... . . . . . .. . .. ... . . . . . . .. . . . ..... .............................................. ..... . . . . . .. .. ..... ..... ... .................................. ... ....... . . ... .. .
lowQualScore : 66 0000 6 444444444444 4 0 000 8 222222 8 2 0 2 2 2 88 5 2 8888888 0 2 0 0 55555555 2 2 0 8 4 22222222222222 8 7 22 444444 2 1 5 7777777777 7777 7 22 0 8 00 0 0 00 000 8 2 2 888 8 0 0 00 2 8 3333333333333 7 7 77777 5 888888 3 222222222222 0 2 5 0 2 0 2 22 6 0 22 0 8 00000000000 2 2 5 2 222222222222222222 0 7 5 66 4 4 8 0 2 0000000000000000000 22 00 0 2 55 88 55 2 0 555 5 2 8 2 2 88 2 99 000 0 0 1 7 0 3 88 0 0 1 33333 9999999999999999999999999999999999999999999999 00000 0 6 0 9 1 00 11 11111 11111 888 3333333333333333333333333333333333 888 4444444 4 1 666 22 0
consensus : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----C-AGCTCTTGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAANGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGNCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACC-C--A--T--TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGG-AATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---TCTCT-CTCTTCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAGCATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCTCCC-TCCAGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATCT-TTT-GCAATTCATTAC-AACTAGTCTGCGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TT-T------T-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
Reference ( family-3621 ) : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----C-AGCTCTTGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAAGGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGGCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACC-C--A--T--TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGGTAATATGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---TCTCT-CTCTTCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAACATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCT-CC-NCCNGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATC--TTT-GCAATTCATTAC-AACTAGTCTGCGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TT-T------T-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
gi|1 : AACTAGAACTGTGAACTGGACCCTCTGCCTAT-TCCCTT----GTGAAGCAAGAAGTCATGGTGC-AGATCTTGCTCTCTTCATAACTTCTATCATAAATAAGTTACTTGAGAGTGGTTCTT---TCCCAAAATCGTT-TGAACGAGCTATTGTTACTCCACTTATGAAAAAGGCTTCACTAGATCCTGGCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCAGA----T--GCATGCAAATTGACTGAGAAGTTTGTAGAAGTGCAAATACATAGATGTACCTAACTCAGTGAGATCAATGTACTGGAGCCATTCCGAAGTGCTTTACGTCAAGGCCATAGTACTGAGACGGTGCTCTTGTGAGGTAACGTTGACATA-------------GTCTGTGTCATTGAAGAGTGGAAGGTTGTCT--TGCTAGTGCAGTAGGACCTATTGGCTGCCTTTAATATCGTAGATCATTCACGCTTGCTGCAAATAC------TCACAAACCTTGGAATTACGGACACTGTGTTCATGTGGTTCGCGTCCGAGCTTACGAATCGTACC-T--A--T--TGTCAAAATGAGGG---GTGCAAAGTCTGGTGCCACTTGATTGGGATTCGGTGTCTCGCAAGGATTGCTCCTTGGGCTTGTTATATTCAGCATTTACACGGCATCCCC-AACAGTCA-TTCTCAGGAAAAACG--AT-GTTTTGTAC-AACATG--TATGCTGACGA---TAATGAACTGTATATCAGTTTAAAAGTCCAGCAGCTCGCTCTTGTAGTCAGT--CAGATGGAATCTTGCTTGAGGTCAGTTCAA-ACCTTGGTGGCTC--AGCATCTCCTCAAGATCAGTGTTGACAAAACTTAGGTGCTAGTGATATCCTTCATAGAATTGGCCTCTAAACTGCACA------T------GC-CATCACTG-AA---A-GTAGGAGAAGACTAGTGCCACTATTACTGTTACTAAAGCCAAGGGTGC-TGGTGAAACCATTAACTGCCATAAAACTATGGAGGCAC--AAGTATCAAAAGTGTGCAGAGGTAGCTTAATCCACCTTAAGAACCTGAGCCAGCTGAGCAGATATCTGGACAGGGAGTCG---------TGTTGTCCATGCCTTCATAACAA----GCCCGACTAATGTACCTCTTTCTTTTCTCTTCTGTGGCTTACCATCAAAGCAGATCCAGAAGCTCTAATCCATC------------------CAAAACGCTAAAGCAAGTATTATCGCAGGC-CCCCGCAAATATGACA---TTACTCCAGTACTAC------T---TTGCCTGCCAGTTCAGCAAAGACTCATCTTCGAGACATTGGTGTTAAAGTATAAAACATTCATCAACATGACTCCATCCTATCTGC---AGTAA-----------CTCATAA---C-ATCTGAACTTTGCGGTCTAA-----AGAGCCTACTACAATTGCC-AT---TTA---------------TTCAATCTCAAGATTTTAGCGTAACTGGTCCTAAACTGCAAAAGGCTCTACCATATCATATC--AAAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAT-TAAA-GACTAATC--TGT-GCAATTCATTAC-AACTAGTCTGTGC-----AAAT--------------GA--------------TT--------------ACTATGTTGTGTAAT-----CT-TAATG-GACTCCTTTTCTTTATTCACTAGTCGTTTG-TGTCT--ATACAA-----CT-----TA---CG-G------T-A----------------T------T---TAAA-------TAGCCTTTAA-AGCAA--TTTGGATTTTACGCTTTACAAAGTATAA-TCAT
gi|10 : t--AGAACTGCTGCTAGTCTCTG---TATCTTGA-AATCTAAAC-TG-------------CTT-GAAAGTCATTAC-AATTAGTCTGTGC-----AGAT--------------GAACTCCAAGTCAAGATT--------------ACTTTGTTGTGCAAT-----CA-TAATG-GACTCCTTGTCTTCACCTACTAGTCATTTG-TTTTT--ATACAG-----CT-----TAGTTTT-T------T-G----------------T------TACCTAAA-------TAGCGGTTAG-ACCAA--TATGAAATTTACGCTTTACAAAAT
gi|11 : TC--TTT-GAAATATATTAC-AAATATTCTGCGC-----AGAT--------------GA--------------CTTCTAAGTCAAGATAACTATGTTGTGTAATTTGATCG-TAATG-GACTTCTGATCTTCATCTACTAGTCAATTG-TTTTA--A-ACAA-----CTAATTGTA---TT-T------TTA----------------T------T---TGA--------TAGCGTTTAG-ACCAA--TATAGATTCTACGCTTTACAAAATA-AA-gaatgcattattaatt
gi|14 : ttCTAGTGATATCCTTCAAACATATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CATGCACGTAGGAAAATACT----CCATCACTCCTGTTACTGAAGCCAAGGCCTT-GG-TGTAACCATTGACTGTCACATGATCGTAAAGGCAC--ATATATTATCAGTATGCAGAGgt
gi|15 : TGCCTTTGACACTGTATATCATTTACGCTTTCTGCAAATAC------TCAAGGACCTTTGAATGAAGGGTACTATGCTCATGTGGTTCTTGTCTTATTTTACCAATCGGACC-CAGA--T--TATCAAAATTAAGG---GAGCAAAGTCTGTTGTCACTG
gi|16 : CTATAT-GTACAAT-----CAACCATGAGACTCCTTGTCTT-ATCATCTAGTCATTTGGTTTTT--ATACAA-----CT-----TA---TT----------A----------------T------T---TAAAATTTTATTGGTATTAAATAGCG---TATGGATTTTACGCTTTATAAAATTTTA-TTAT
gi|17 : taaatatCAGATCCAGAGGCTCCAATCCATC------------------CAAAATACTGCAGACAGAATCATCTCAGAT-ATTCGTAAAT-TGACTGCATTACATTAGTACTACGCCTTCTCCATTGACTGTCTGTTCAGCAAAGAGTCACCTTCAAGACATTtat
gi|18 : A--------------TT--------------ACTATGTTGTGCAAC-----GG-TAATG-GACTCCTTATCCTC------TAGTCATTTG-TTTTC--ATACAA-----CT-----TA---TT-TTATTGCT-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--T
gi|19 : ATG-GACTCCTTGTCTT-ATCATCTAGTCATTTG-GTTTT--ATACAA-----CT-----TA---TT-T------T-ACTTATTTTATTGTATTT------T---TAAA-------TAGCGTTT-------------GGATTTTACGCTTTATAAAATttaacgatgatcacactatatatataaagagt
gi|2 : accA----TATGTACCTGAGTTGAACGAGAAGGTTTTATCAGCACAGAAAC------ATACCTACTTCAGTGAGAACAATATACTGGAGCTATTCTAAAGTGCTTACCGACAGTGGTATAGTACCGATACTGCACTTCTGCTCGTTCAAAACGATGT----------------------------AGAGCAGAAAGGTGTCT--TGCTAGTGCAGTTGGAC-TATCGGCTGCCTTGGACACTATAGATAATTCAGGATTGCTGCAAGTAC------TCAAGGATCTTTGAATCAAGGACACTGTGCTCATTTAGTTGGCGTCCTATCTTACCAATCGAATC-C--AGGT--TGTCAAAGTAAAGG---GAGCAAAATCTTTTATCACCAAGTTGAGCCGCAGTGTCCCCCTAAGATTTGTCATCGGGCCTGTTCTGTTCAACGTGTACACATTATCTTT-GGCA-CCC-TTTT-AAAAAGA-CA--ATCGTCTTGTACGCTAATGCTTATGTTGACGAATTTCAAGATTTGTA----A----TGAAGTC-ATCGGGCTGCTGTTGTAGTAAATATCAGATTGAATCTTGAT-GAGGTTAGGTTAAGACCCGAATGGCTCCTAG--TCACTTTAA-ATCAACGCAAGCAAGACTGATGTGCTAGTGATATCCTCCAAACTAATGGCCGCTAAACTGCACA------T------AC-CATCAATG-CA---A-GCAGGAAAA--CT----CAATCACTCCTATTACTAATGCCAAGGGTGTATG-TGTAAGCATTTACTGTCAAATGACCGTGACAACAC--ATATATCATCAATATACAGAGATGCCTTCATCCACCTTAAGAACCTGCGCCAGCTGAGGAGATATCTGAACAGGGAGTCGCTGG-AGTGTATTTTCCATGCCTTCATAACAACAAAGTTGCACTACTGTAACT---TTTC----CGCCTGTGGTTTACAATTAAAACAGATCCAGATGTTTCAATCAATC------------------CAAATCGTTGTATCCAGAATTATCTCAGGC-ACCTGTAAATATGACATTATTACACCAGTACAACGCTATCTTCATTGGCTGCCAGTTCAGC--AGAGTCTTCTTCAAGACATTGGTGTTAGTGTATAAAACTGTCTACAACATGACTCCATCCTATCTGC---AG-GAACTCATAACACCCTATGCTCCC-TCCAAAACTTTGCAGTCCAATGACCGGAGCCTACTACAAAGGCCAATTAATTACCACCTCATCTATGATTCAATCTTGA-CCTCTAGTGTGGTTGGCCATAAACTGTGGAATGATCTACCATGTGAGATC--AGACCTTTTGTTAATATCTG---TAACTTTACAATCTAAAC-T-AA-GAATCACCTTTTT-GCAATTTATTACTATTTAGTCTGCtttatta
gi|2 : T--------------ACCATGTTGTGCATT-----CA-TAATG-GAGTACTTACTTTCATCTACTAGTCATTTG--TTTT--ATGCAA-----CT-----TA---TT-T------T-A----------------TTGTTACT---TAAA-------AAGCCTTTAG-AGCAG--TATGGAATTTTCGCTTTGCAAAAT-TAATTCATtgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaataccatgttgtgcattcataatggagtacttactttcatctactagtcatttgttttatgcaacttattttattgttacttaaaaagcctttagagcagtatggaattttcgctttgcaaaattaattcatta
gi|20 : atatgtacctgagttgaacgagaaggttttatcagcacagaaacatacctacttcagtgagaacaatatactggagctattctaaagtgcttaccgacagtggtatagtaccgatactgcacttctgctcgttcaaaacgatgtagagcagaaaggtgtcttgctagtgcagttggactatcggctgccttggacactatagataattcaggattgctgcaagtactcaaggatctttgaatcaaggacactgtgctcatttagttggcgtcctatcttaccaatcgaatccaggttgtcaaagtaaagggagcaaaatcttttatcaccaagttgagccgcagtgtccccctaagatttgtcatcgggcctgttctgttcaacgtgtacacattatctttggcacccttttaaaaagacaatcgtcttgtacgctaatgcttatgttgacgaatttcaagatttgtaatgaagtcatcgggctgctgttgtagtaaatatcagattgaatcttgatgaggttaggttaagacccgaatggctcctagtcactttaaatcaacgcaagcaagactgatgtgctagtgatatcctccaaactaatggccgctaaactgcacataccatcaatgcaagcaggaaaactcaatcactcctattactaatgccaagggtgtatgtgtaagcatttactgtcaaatgaccgtgacaacacatatatcatcaatatacagagatgccttcatccaccttaagaacctgcgccagctgaggagatatctgaacagggagtcgctggagtgtattttccatgccttcataacaacaaagttgcactactgtaacttttccgcctgtggtttacaattaaaacagatccagatgtttcaatcaatccaaatcgttgtatccagaattatctcaggcacctgtaaatatgacattattacaccagtacaacgctatcttcattggctgccagttcagcagagtcttcttcaagacattggtgttagtgtataaaactgtctacaacatgactccatcctatctgcaggaactcataacaccctatgctccctccaaaactttgcagtccaatgaccggagcctactacaaaggccaattaattaccacctcatctatgattcaatcttgacctctagtgtggttggccataaactgtggaatgatctaccatgtgagatcagaccttttgttaatatctgtaactttacaatctaaactaagaatcacctttttgcaatttattactatttagtctgctgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaaCTTTA-AATCAAAAC-TAAA-GAATCACC--TTTTGCAATTTATTAC-TATTAGTCTGCGCTGTTAAAATCTATGTCAA-----GA--------------AT--------------ACCATGTTGTGCATT-----CA-TAATG-GAGTACTTta
gi|21 : GCAGATGGACCTATCGGCTGCCTTTGGCACTGTACATCATCCATACTTGCTGCAAATAC------TCAATGACCTTGGAATTAAGGGCACTGTGCT
gi|22 : attttgtacgATGCAATGTTTAAGAACTGCTGCTGCTCTTTGAGATATCTTTC-AATCTAAAT-TAAA-GACTCATCTGTTT-GCAGTTCATTAC-AACTAGCCTGTGC-----
gi|24 : gggGGCTCCAATCCATA------------------CAGAACGCTGCAGCAACAATCATCTCAGGC-ACCCGCAAATATGACAACATAACACCAGTACTg
gi|25 : gcCACTTAGTAGCCATCTG-TTTTTTTATATAAGTGATTT-----TA---TTGT------T-A----------------T------T---TAAA-------TAGTGTTTAG-AGCAG--TGTGGATTT
gi|26 : A--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-AACTCCTTTTCTTatt
gi|3 : cgtctttacaaatgaactctaattcaaaAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----CAAG--CTTGCTCCCGTCATCACCTCTATCATATATAAATCACTTGAGAGTGGTTCCT---TCCCAAC
gi|3 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccAGTACTAAGACGGCACTTCTACGAGTTCACAAAGATGTG-------------GTCTGTACCCTTGGAGTGCAGAAGGCTGTCT--TGCTAGTGCAGTTGGATCTATTGGCTGCTTTTGACACTGTACATAATTCACGCTAGCTGCAGATAC------TCAAGGACCTTGGAATTAA-GACACTGTGCTCATGTGGTTCATGTCCT--------AGTCGGACCAG--A--T--TGTCAAAGTGAATT---GAGCAAAGTCTGGTGCCATTGAGTTAAGCTGCGGTGTCCTCCAGGAATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT--GGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATA--AATGCTGACGT---TAATGAACTGTATATTAACTTTAAAATCTATCAGGCCTCTCTTTTAGTCAGT--CCGATGGAGTCTAGCTAGAGGCCAGTTCTA-ACCTTGATGGCTC--AGCATCACCTCAAGATT-TCACAGACAAGACTGAGGCACTAGTGATATCTCCCAAACAAATGGCCTCTAAGCTGCACA------TTATGCAACACATAATTATCA---T-CAAGGAGAAGAAT------ACCATTCCTGTTACTAAAGCC---------------AATCATGGA--GGCACAT----------ATAC--ATGTATCATCAGTGTGCAGAGGTGCCTTCATCTACATTAAGAAC---------CTGAGGAGATATCTGGACAGGTAGTCGCTGG-ATTATGTTGTTCATGCCTTCATAACTACAAAGCTGGACTACTGTAA------CTAT-CTCTTCTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtactaagacggcacttctacgagttcacaaagatgtggtctgtacccttggagtgcagaaggctgtcttgctagtgcagttggatctattggctgcttttgacactgtacataattcacgctagctgcagatactcaaggaccttggaattaagacactgtgctcatgtggttcatgtcctagtcggaccagattgtcaaagtgaattgagcaaagtctggtgccattgagttaagctgcggtgtcctccaggaatcggtcctcgggcctgttctgttcaacatctacacagcatccctggggcccttctcagaaagaacaatgtcttgtaccacataaatgctgacgttaatgaactgtatattaactttaaaatctatcaggcctctcttttagtcagtccgatggagtctagctagaggccagttctaaccttgatggctcagcatcacctcaagatttcacagacaagactgaggcactagtgatatctcccaaacaaatggcctctaagctgcacattatgcaacacataattatcatcaaggagaagaataccattcctgttactaaagccaatcatggaggcacatatacatgtatcatcagtgtgcagaggtgccttcatctacattaagaacctgaggagatatctggacaggtagtcgctggattatgttgttcatgccttcataactacaaagctggactactgtaactatctcttctg
gi|4 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccaacaagagctgtgaactggaccctctgcctacatcccttgtgaagcaagaagtcacaagcttgctcccgtcatcacctctatcatatataaatcacttgagagtggttccttcccaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTCCGTGGAGAGCAGAAGGCTGTCT--TGCTCGTGCAGTTGGACCTATCAGCTGCCTTTGACATTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCATAGAATTGAGGACACTG--CTTATGGGGTTCGCGTTATATCTTACCAATTGGACC-C--AAAT--TGTCAACGTGAAGGAGGGAGCAACGTCTGGTGCCACAGAGTTGGAATGCAGTGTCCCC-AGGATTCGGTCCTCAAGCCTGTTGTGTTCACCATCCTCACAGCATCCCTAGGGGGCCC-TTCACAGCAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TGATGAACTGTATATCACCTTTATAGTCCAGCAGGTCGCTCTTGTAGTCAGT--CTGATGGAGTCTTGCTTGAGTTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAAATCAACACAGACAAAACAGAGGTGTTAGTGATATACTCCAAACAAATTGCTTCTAAGCTTCACATAAATGT------AC-CATTACTG-CA---C-GT---AGAAGACT----CTATCACTCCTGTTACTATGGCCAAA------------------TGAC-----------CATGGAGGCACATATATATCATCAGTGAGCAGAAATGCCTTCATCGTCTTTTAGAGCCTGAGCCAGCTGAGGAGATATCTGGTCAGGGAGTCGCTGG-AATATGTTGTCCATGCCTTCCTAACAACAAAGCTGGACTACTGTAA------CACT-CTCTTCTGCGGCTT------AAAGCAGATCCAGAGGCTCCAATCCATCCAGAGGCTCCAATCCATACAAAACGCTGCATCCAGAATCATCTCAGAC-ACCCGAAAATATAACAGCATTACACCAGTATTACGCTCCCTCCATTGGCTGCTAGTTTAGCAAATAGTCATCTTCTTGACATTGTTGTTGATGCACAAAACTGTCAGCAACATATCTCCACCCTATCTGCATAAC-AA-----------CCTATGCT-CCATCCAGAACTCTGCAGTTCAGTGACCAGAGTCTATTATAAGTGCC-AT---TCACCACTTCATCTGTGATTCAATCTCGAGTTTTTGGTGGGGCTGGCCCTTAACTGTGGAATGCTCTACCATGTGACGTC--AGAATTGCTGTTAGTCTCTA---TATCTTCA-AATCTAAAC-
gi|5 : --T--TGTCAAAATGAAG------------TCTGGTGTCTCTGAGTTGGCCAGTGGTGTCCCCTAGGGATCGATCCTTGGGTTTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCCCTTCTCAGAAAGAACACAAT-GTCATGTCC-CACATG--TATCCTGACGA---TAATGAACTGGATATCAGCTTTAATGTCCAGCAAGCCGCTCTTGTAGTAAG------ATGGAGTCTTGCTTGAGGTCAATTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGGTCAACACAGACAAGGCTGAAGTGCTAGTGATATCATCCGAACAAATGGCCGCTAAACTGCATA------T------AC-AATCACTG-CA---A-GTATGAGAAGACT----CAATCACCC--GTTACTAAGGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCATGGAGACAC--ACAT--CATCGGTGTGCAGAGGTGCCTTCATCCACCTAAAGAACCTGAGTCAGCTGAG---ATATCTGGACAGGTAGTCGCTG-TAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---------CTCTTCTGAGGCTTACCATCAAAGCAGATCCAGCGGCTCCAATCC-TC------------------CAAAACGCCGAAGCCAGAATCATCTCGGGCAAATCGCAAAGATAACAACAATACACCAGTACTACGCTCCCTTCATTGACTGCCAGTTCAGCAAAGAGTTATCTTCAAGACACTGGTGTTAGTGCACAAAACAGTCAGCAACATAACTCCATCCTATCTGC---AG-AA-----------TCTATGCTCCC-TCCAGAACTCTGGGGTCCAGTGATTAGA---T----TAAGTGCC-AT---TTACCACCTCACCTGTAATTCAGTCTCGAACTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTCCCATGTGATGTA--AGAACTGCTGCTAGTCTCTT---TATCTTTA-ACTATTAAC-TAAA-GACTCATCT-TTT-GCAATTTATTAC-AACTAGT-----C-----AAA---------------AA------------------------------ACTATTTTAAGCAAT-----AA-TAATG-GACTCCTTgagatcttttaaagatcgatctgt
gi|6 : acaggAACAAGAGCTGTAAAGTGGAA--TCTGCCTACATCCCTTAATTGTGAAGCAAGAAGTCA-----T-AGCCTTTGCTCCCATCATCACCTGTTTCATAAATAATCCACTTAAGAGTGGTTCCT---TCCC-ACGTCTTT-CAAAGGAGTTATTGTAACACCACTTCTGAAAAAGGCTTCACTAGAGCCTGCTATACCAAAGAACTACTGGCTAGTGTCTAACCTTGCATACATGTATGTATCCAAGCCGTTTGGAAAGGTTGTAGCAACACAGATAC------GTGCCTACTTCAATGAGAGCAATCTAATGGAGCCACTCCAAAGTGCTTACCGTCAAGGGCATAGTACAGAGACGGCACTTCTGTGAGTTCACAATGATGTGGTACATTGTACATGTATGTGCCCTTGGAGAGCGGAAGACTGTCTAATGCTAATGTAGTTGGACCTATTGGCTGCTTTTGACAAAGTAGGTCATTCACG--------------------TCAAGGACCTTAGAAATAAGGACACTGTGCTCATGTGGTTCGCATCCTATCTTACAAATCGGACC-C--A--GAATGTCAAGGTGAAGG---GAGCAAAGTCGGGTGCCACTGAGTTAGGCTGCAGTGTCTGATAGGGGCTGGACCTCGGGCTTGT
gi|7 : taagcaccagcattacaaatgtgtgttgcatgataacacagttgacagtaaacagcctttcagagtggtcaacaagctgcttggtaggaactctaccactccactgcttgtcgacaattaaattaccatcagatctggctggcatgtttagtgaatttttgtgcaaaaccttgtacgaattcgcagctctattacatatgacaatcacaatctacatgtcgacccatgtactcggtgataatacaatgtgtaactgaggtcgtctgccAACAAGAGCTGTGAACAGGACCCTATGCCTACA----------------------GTC------------CTTGCTCCCATCATCACTTCCATCATAATTAAGTCACTTGAGAGTGGCTCCTAATTCTCACCATC-TT-TCAA--AGCTATTGTGACATCACTTCTGGAAAAGGTTTCACTAGACCC-----------AGA----CAGGTCTGTGTCTAACCTTTCATA----T--GTATCCATATTGATTGAGAAGTCTGTAGCAGCACAAATA--------TACATACCTCGCTGAAAACAGTCTGCTGGAGACATTCCAAAGTGCTTACCATAAAGGGCATAGTACTG-GACGGCACTTCTGCGAGTTAACAACGATGTG-------------GTATGTGCCCTTGGAGACCAGGAGGCTGTCT--TGCTAATGCAATTTGACCTATCGACTGGCTTTGACACTGTAGATCATTCACACTTGCCGCAAATACTAATTTTAAATGACCTTGGAATTAAGGACG-------CA-GTGGTTTGCGTC
gi|8 : cgtagttccaatacatgtggcagtcacaatccacttgttgacctgaccagtattcggtgatgaaactggactccatttccgacgtgttactataaatgaggtcacaaagttaattaggtcatctgccAACAAGAGCTATCAACTTGAACCTCTACCTAAATTCTTC----GTGAAGCAAGGCGTCA-----C-AGCTCTTGTTCCCGTCATCACTGCTCTAATGAATAAGTGACTTTAAAGTGGTTCCT---TCCAAACATT-GTACAAAAGAGCTATTGTGACACCATTTATGAGAAAGGGTTAACCAGACCCTGACATACCAAA-AACTACAGGC
gi|9 : acactcatcaattcagctaagctccagtattacaggtgcatggtaacaaaggtggcagtaagcagcttttcaaaatggtcaacatgcatcttggtagaaactccactactccatcatctgctgacatatttaccatcagatctggctggcatacttagtgactcttttgtgcagaaatctatgctaagtcgcagctccatagcatgtgacaatcacaatgcacttattgacccaccagcactctgtgatgaaactgtactcaatcatatccatcatgttagtgaggatgaggtcacacaattgattacgccatctgccAAACTGTGGAATGCACTACCATGTGACCTC--AGAACTGCTGCTAGTCTCTG---TAACTTTG-AATCTACATGTAAACGATT--TG--TTT-GCAATTCGTGAC-ATCTAGTCTGTGC-----GGATGGACTTTATGTCAAGA--------------TT--------------AC--TGTTGGGCAAT-----CA-TAATG-AACTCCTTCTCTTCACCTACTAGTCATTTG--TTTT--ATACAA-----CT-----TT---TT-T------T-A----------------T------T------------------GTT--------ATTTATAGATTTTACGCTTTACAAAATA
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCATGATAACAAAGGTGCACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGTGCTCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTCCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|13 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCAATGATAACAAAGGTGACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGCTGCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTACCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|23 ): CATCAGAGAGATCTGGATGACAGGTTAGAAACTTTTTTGCAGAAAGTTACACGAATTTGCTGCTCCATTACATGTGACAATCACAATCCAC
Unaligned ( gi|27 ): GTCAACAAGCTGCTTGGTAGGAACTCCACTCCA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111
lowQualScore : 1111 333333333333 111 222222 1 3333333 33333333 44444444444444 111111 2222222222 1111 11 11 11 111 111 11 2222222222222 11111 111111 333333333333 55555555555 444444444444444444 4444444444444444444 1 111 111 11111 0000000000000000000000000000000000000000000000 11111 11111 11111 4444444444444444444444444444444444 1111111 1
lowQualScore : 11 7777 0 111111111111 1 1 444 0 000000 0 0 1 0 0 3 44 2 3 0000000 2 1 1 2 11111111 0 1 1 0 1 77777777777777 3 0 99 444444 0 0 2 1111111111 0000 3 11 8 0 11 8 8 11 444 0 8 3 111 3 6 8 11 3 0 9999999999999 6 6 77777 2 555555 0 000000000000 1 3 1 1 5 1 2 99 0 5 4 1 11111111111 4 3 2 0 999999999999999999 1 6 7 44 6 1 0 1 0 8888888888888888888 2 3 00 22 33 0 0 777 2 0 0 0 0 66 2 77 000 5 5 2 5 44 1 66666 5 1 44444 0000000000000000000000000000000000000000000000 00000 4 3 1 2 1 99 66 11111 11111 777 0000000000000000000000000000000000 777 4444444 4 1 888 99 0
lowQualScore : .. .... . ............ . . ... . ...... . . . . . . .. . . ....... . . . . ........ . . . . . .............. . . .. ...... . . . .......... .... . .. . . .. . . .. ... . . . ... . . . .. . . ............. . . ..... . ...... . ............ . . . . . . . .. . . . . ........... . . . . .................. . . . .. . . . . . ................... . . .. .. .. . . ... . . . . . .. . .. ... . . . . .. . ..... . . ..... .............................................. ..... . . . . . .. .. ..... ..... ... .................................. ... ....... . . ... .. .
lowQualScore : 66 0000 6 444444444444 4 0 000 8 222222 8 2 0 2 2 2 88 5 2 8888888 0 2 0 0 55555555 2 2 0 8 4 22222222222222 8 7 22 444444 2 1 5 7777777777 7777 7 22 0 8 00 0 0 00 000 8 2 2 888 8 0 0 00 2 8 3333333333333 7 7 77777 5 888888 3 222222222222 0 2 5 0 2 0 2 22 6 0 0 4 00000000000 2 2 5 2 222222222222222222 0 7 8 66 4 4 8 0 2 0000000000000000000 5 2 55 88 55 2 0 555 5 2 8 2 2 88 2 99 000 0 0 0 0 66 4 66666 0 1 33333 9999999999999999999999999999999999999999999999 00000 0 6 0 9 1 00 11 11111 11111 888 3333333333333333333333333333333333 888 4444444 4 1 666 22 0
consensus : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----C-AGCTCTTGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAANGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGNCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACC-C--A--T--TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGGAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---TCTCT-CTCTTCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAGCATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCTCCCTCCAGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATC-T-TTTGCAATTCATTAC-AACTAGTCTGCGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TT-T------T-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
Reference ( family-3621 ) : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----C-AGCTCTTGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAANGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGNCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACC-C--A--T--TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGGAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---TCTCT-CTCTTCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAGCATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCTCCCTCCAGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATC-T-TTTGCAATTCATTAC-AACTAGTCTGCGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TT-T------T-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
gi|1 : AACTAGAACTGTGAACTGGACCCTCTGCCTAT-TCCCTT----GTGAAGCAAGAAGTCATGGTGC-AGATCTTGCTCTCTTCATAACTTCTATCATAAATAAGTTACTTGAGAGTGGTTCTT---TCCCAAAATCGTT-TGAACGAGCTATTGTTACTCCACTTATGAAAAAGGCTTCACTAGATCCTGGCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCAGA----T--GCATGCAAATTGACTGAGAAGTTTGTAGAAGTGCAAATACATAGATGTACCTAACTCAGTGAGATCAATGTACTGGAGCCATTCCGAAGTGCTTTACGTCAAGGCCATAGTACTGAGACGGTGCTCTTGTGAGGTAACGTTGACATA-------------GTCTGTGTCATTGAAGAGTGGAAGGTTGTCT--TGCTAGTGCAGTAGGACCTATTGGCTGCCTTTAATATCGTAGATCATTCACGCTTGCTGCAAATAC------TCACAAACCTTGGAATTACGGACACTGTGTTCATGTGGTTCGCGTCCGAGCTTACGAATCGTACC-T--A--T--TGTCAAAATGAGGG---GTGCAAAGTCTGGTGCCACTTGATTGGGATTCGGTGTCTCGCAAGGATTGCTCCTTGGGCTTGTTATATTCAGCATTTACACGGCATCCCC-AACAGTCA-TTCTCAGGAAAAACG--AT-GTTTTGTAC-AACATG--TATGCTGACGA---TAATGAACTGTATATCAGTTTAAAAGTCCAGCAGCTCGCTCTTGTAGTCAGT--CAGATGGAATCTTGCTTGAGGTCAGTTCAA-ACCTTGGTGGCTC--AGCATCTCCTCAAGATCAGTGTTGACAAAACTTAGGTGCTAGTGATATCCTTCATAGAATTGGCCTCTAAACTGCACA------T------GC-CATCACTG-AA---A-GTAGGAGAAGACTAGTGCCACTATTACTGTTACTAAAGCCAAGGGTGC-TGGTGAAACCATTAACTGCCATAAAACTATGGAGGCAC--AAGTATCAAAAGTGTGCAGAGGTAGCTTAATCCACCTTAAGAACCTGAGCCAGCTGAGCAGATATCTGGACAGGGAGTCG--------TGTTGTCCATGCCTTCATAACAA----GCCCGACTAATGTACCTCTTTCTTTTCTCTTCTGTGGCTTACCATCAAAGCAGATCCAGAAGCTCTAATCCATC------------------CAAAACGCTAAAGCAAGTATTATCGCAGGC-CCCCGCAAATATGACA---TTACTCCAGTACTAC------T---TTGCCTGCCAGTTCAGCAAAGACTCATCTTCGAGACATTGGTGTTAAAGTATAAAACATTCATCAACATGACTCCATCCTATCTGC---AGTAA-----------CTCATAACATCT---GAACTTTGCGGTCTAA-----AGAGCCTACTACAATTGCC-AT---TTA---------------TTCAATCTCAAGATTTTAGCGTAACTGGTCCTAAACTGCAAAAGGCTCTACCATATCATATC--AAAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAT-TAAA-GACTAATC-T-GT-GCAATTCATTAC-AACTAGTCTGTGC-----AAAT--------------GA--------------TT--------------ACTATGTTGTGTAAT-----CT-TAATG-GACTCCTTTTCTTTATTCACTAGTCGTTTG-TGTCT--ATACAA-----CT-----TA---CG-G------T-A----------------T------T---TAAA-------TAGCCTTTAA-AGCAA--TTTGGATTTTACGCTTTACAAAGTATAA-TCAT
gi|10 : t--AGAACTGCTGCTAGTCTCTG---TATCTTGA-AATCTAAAC-TG--------------CTTGAAAGTCATTAC-AATTAGTCTGTGC-----AGAT--------------GAACTCCAAGTCAAGATT--------------ACTTTGTTGTGCAAT-----CA-TAATG-GACTCCTTGTCTTCACCTACTAGTCATTTG-TTTTT--ATACAG-----CT-----TAGTTTT-T------T-G----------------T------TACCTAAA-------TAGCGGTTAG-ACCAA--TATGAAATTTACGCTTTACAAAAT
gi|11 : -TTTGAAATATATTAC-AAATATTCTGCGC-----AGAT--------------GA--------------CTTCTAAGTCAAGATAACTATGTTGTGTAATTTGATCG-TAATG-GACTTCTGATCTTCATCTACTAGTCAATTG-TTTTA--A-ACAA-----CTAATTGTA---TT-T------TTA----------------T------T---TGA--------TAGCGTTTAG-ACCAA--TATAGATTCTACGCTTTACAAAATA-AA-gaatgcattattaatt
gi|14 : tttcCTAGTGATATCCTTCAAACATATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CATGCACGTAGGAAAATACT----CCATCACTCCTGTTACTGAAGCCAAGGCCTT-GG-TGTAACCATTGACTGTCACATGATCGTAAAGGCAC--ATATATTATCAGTATGCAGAGgt
gi|15 : TGCCTTTGACACTGTATATCATTTACGCTTTCTGCAAATAC------TCAAGGACCTTTGAATGAAGGGTACTATGCTCATGTGGTTCTTGTCTTATTTTACCAATCGGACC-CAGA--T--TATCAAAATTAAGG---GAGCAAAGTCTGTTGTCACTG
gi|16 : CTATAT-GTACAAT-----CAACCATGAGACTCCTTGTCTT-ATCATCTAGTCATTTGGTTTTT--ATACAA-----CT-----TA---TT----------A----------------T------T---TAAAATTTTATTGGTATTAAATAGCG---TATGGATTTTACGCTTTATAAAATTTTA-TTAT
gi|17 : taaatatCAGATCCAGAGGCTCCAATCCATC------------------CAAAATACTGCAGACAGAATCATCTCAGAT-ATTCGTAAAT-TGACTGCATTACATTAGTACTACGCCTTCTCCATTGACTGTCTGTTCAGCAAAGAGTCACCTTCAAGACATTtat
gi|18 : A--------------TT--------------ACTATGTTGTGCAAC-----GG-TAATG-GACTCCTTATCCTC------TAGTCATTTG-TTTTC--ATACAA-----CT-----TA---TT-TTATTGCT-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--T
gi|19 : ATG-GACTCCTTGTCTT-ATCATCTAGTCATTTG-GTTTT--ATACAA-----CT-----TA---TT-T------T-ACTTATTTTATTGTATTT------T---TAAA-------TAGCGTTT-------------GGATTTTACGCTTTATAAAATttaacgatgatcacactatatatataaagagt
gi|2 : accA----TATGTACCTGAGTTGAACGAGAAGGTTTTATCAGCACAGAAAC------ATACCTACTTCAGTGAGAACAATATACTGGAGCTATTCTAAAGTGCTTACCGACAGTGGTATAGTACCGATACTGCACTTCTGCTCGTTCAAAACGATGT----------------------------AGAGCAGAAAGGTGTCT--TGCTAGTGCAGTTGGAC-TATCGGCTGCCTTGGACACTATAGATAATTCAGGATTGCTGCAAGTAC------TCAAGGATCTTTGAATCAAGGACACTGTGCTCATTTAGTTGGCGTCCTATCTTACCAATCGAATC-C--AGGT--TGTCAAAGTAAAGG---GAGCAAAATCTTTTATCACCAAGTTGAGCCGCAGTGTCCCCCTAAGATTTGTCATCGGGCCTGTTCTGTTCAACGTGTACACATTATCTTT-GGCA-CCC-TTTT-AAAAAGA-CA--ATCGTCTTGTACGCTAATGCTTATGTTGACGAATTTCAAGATTTGTA----A----TGAAGTC-ATCGGGCTGCTGTTGTAGTAAATATCAGATTGAATCTTGAT-GAGGTTAGGTTAAGACCCGAATGGCTCCTAG--TCACTTTAA-ATCAACGCAAGCAAGACTGATGTGCTAGTGATATCCTCCAAACTAATGGCCGCTAAACTGCACA------T------AC-CATCAATG-CA---A-GCAGGAAAA--CT----CAATCACTCCTATTACTAATGCCAAGGGTGTATG-TGTAAGCATTTACTGTCAAATGACCGTGACAACAC--ATATATCATCAATATACAGAGATGCCTTCATCCACCTTAAGAACCTGCGCCAGCTGAGGAGATATCTGAACAGGGAGTCGCTGGAGTGTATTTTCCATGCCTTCATAACAACAAAGTTGCACTACTGTAACT---TTTC----CGCCTGTGGTTTACAATTAAAACAGATCCAGATGTTTCAATCAATC------------------CAAATCGTTGTATCCAGAATTATCTCAGGC-ACCTGTAAATATGACATTATTACACCAGTACAACGCTATCTTCATTGGCTGCCAGTTCAGC--AGAGTCTTCTTCAAGACATTGGTGTTAGTGTATAAAACTGTCTACAACATGACTCCATCCTATCTGC---AG-GAACTCATAACACCCTATGCTCCCTCCAAAACTTTGCAGTCCAATGACCGGAGCCTACTACAAAGGCCAATTAATTACCACCTCATCTATGATTCAATCTTGA-CCTCTAGTGTGGTTGGCCATAAACTGTGGAATGATCTACCATGTGAGATC--AGACCTTTTGTTAATATCTG---TAACTTTACAATCTAAAC-T-AA-GAATCACCTT-TTTGCAATTTATTACTATTTAGTCTGCtttatta
gi|2 : T--------------ACCATGTTGTGCATT-----CA-TAATG-GAGTACTTACTTTCATCTACTAGTCATTTG--TTTT--ATGCAA-----CT-----TA---TT-T------T-A----------------TTGTTACT---TAAA-------AAGCCTTTAG-AGCAG--TATGGAATTTTCGCTTTGCAAAAT-TAATTCATtgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaataccatgttgtgcattcataatggagtacttactttcatctactagtcatttgttttatgcaacttattttattgttacttaaaaagcctttagagcagtatggaattttcgctttgcaaaattaattcatta
gi|20 : atatgtacctgagttgaacgagaaggttttatcagcacagaaacatacctacttcagtgagaacaatatactggagctattctaaagtgcttaccgacagtggtatagtaccgatactgcacttctgctcgttcaaaacgatgtagagcagaaaggtgtcttgctagtgcagttggactatcggctgccttggacactatagataattcaggattgctgcaagtactcaaggatctttgaatcaaggacactgtgctcatttagttggcgtcctatcttaccaatcgaatccaggttgtcaaagtaaagggagcaaaatcttttatcaccaagttgagccgcagtgtccccctaagatttgtcatcgggcctgttctgttcaacgtgtacacattatctttggcacccttttaaaaagacaatcgtcttgtacgctaatgcttatgttgacgaatttcaagatttgtaatgaagtcatcgggctgctgttgtagtaaatatcagattgaatcttgatgaggttaggttaagacccgaatggctcctagtcactttaaatcaacgcaagcaagactgatgtgctagtgatatcctccaaactaatggccgctaaactgcacataccatcaatgcaagcaggaaaactcaatcactcctattactaatgccaagggtgtatgtgtaagcatttactgtcaaatgaccgtgacaacacatatatcatcaatatacagagatgccttcatccaccttaagaacctgcgccagctgaggagatatctgaacagggagtcgctggagtgtattttccatgccttcataacaacaaagttgcactactgtaacttttccgcctgtggtttacaattaaaacagatccagatgtttcaatcaatccaaatcgttgtatccagaattatctcaggcacctgtaaatatgacattattacaccagtacaacgctatcttcattggctgccagttcagcagagtcttcttcaagacattggtgttagtgtataaaactgtctacaacatgactccatcctatctgcaggaactcataacaccctatgctccctccaaaactttgcagtccaatgaccggagcctactacaaaggccaattaattaccacctcatctatgattcaatcttgacctctagtgtggttggccataaactgtggaatgatctaccatgtgagatcagaccttttgttaatatctgtaactttacaatctaaactaagaatcacctttttgcaatttattactatttagtctgctgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaaCTTTA-AATCAAAAC-TAAA-GAATCACC-T-TTTGCAATTTATTAC-TATTAGTCTGCGCTGTTAAAATCTATGTCAA-----GA--------------AT--------------ACCATGTTGTGCATT-----CA-TAATG-GAGTACTTta
gi|21 : GCAGATGGACCTATCGGCTGCCTTTGGCACTGTACATCATCCATACTTGCTGCAAATAC------TCAATGACCTTGGAATTAAGGGCACTGTGCT
gi|22 : attttgtacgATGCAATGTTTAAGAACTGCTGCTGCTCTTTGAGATATCTTTC-AATCTAAAT-TAAA-GACTCATC-TGTTTGCAGTTCATTAC-AACTAGCCTGTGC-----
gi|24 : gggGGCTCCAATCCATA------------------CAGAACGCTGCAGCAACAATCATCTCAGGC-ACCCGCAAATATGACAACATAACACCAGTACTg
gi|25 : gcCACTTAGTAGCCATCTG-TTTTTTTATATAAGTGATTT-----TA---TTGT------T-A----------------T------T---TAAA-------TAGTGTTTAG-AGCAG--TGTGGATTT
gi|26 : A--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-AACTCCTTTTCTTatt
gi|3 : cgtctttacaaatgaactctaattcaaaAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----CAAG--CTTGCTCCCGTCATCACCTCTATCATATATAAATCACTTGAGAGTGGTTCCT---TCCCAAC
gi|3 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccAGTACTAAGACGGCACTTCTACGAGTTCACAAAGATGTG-------------GTCTGTACCCTTGGAGTGCAGAAGGCTGTCT--TGCTAGTGCAGTTGGATCTATTGGCTGCTTTTGACACTGTACATAATTCACGCTAGCTGCAGATAC------TCAAGGACCTTGGAATTAA-GACACTGTGCTCATGTGGTTCATGTCCT--------AGTCGGACCAG--A--T--TGTCAAAGTGAATT---GAGCAAAGTCTGGTGCCATTGAGTTAAGCTGCGGTGTCCTCCAGGAATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT--GGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATA--AATGCTGACGT---TAATGAACTGTATATTAACTTTAAAATCTATCAGGCCTCTCTTTTAGTCAGT--CCGATGGAGTCTAGCTAGAGGCCAGTTCTA-ACCTTGATGGCTC--AGCATCACCTCAAGATT-TCACAGACAAGACTGAGGCACTAGTGATATCTCCCAAACAAATGGCCTCTAAGCTGCACA------TTATGCAACACATAATTATCA---T-CAAGGAGAAGAAT------ACCATTCCTGTTACTAAAGCC---------------AATCATGGA--GGCACAT----------ATAC--ATGTATCATCAGTGTGCAGAGGTGCCTTCATCTACATTAAGAAC---------CTGAGGAGATATCTGGACAGGTAGTCGCTGGATTATGTTGTTCATGCCTTCATAACTACAAAGCTGGACTACTGTAA------CTAT-CTCTTCTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtactaagacggcacttctacgagttcacaaagatgtggtctgtacccttggagtgcagaaggctgtcttgctagtgcagttggatctattggctgcttttgacactgtacataattcacgctagctgcagatactcaaggaccttggaattaagacactgtgctcatgtggttcatgtcctagtcggaccagattgtcaaagtgaattgagcaaagtctggtgccattgagttaagctgcggtgtcctccaggaatcggtcctcgggcctgttctgttcaacatctacacagcatccctggggcccttctcagaaagaacaatgtcttgtaccacataaatgctgacgttaatgaactgtatattaactttaaaatctatcaggcctctcttttagtcagtccgatggagtctagctagaggccagttctaaccttgatggctcagcatcacctcaagatttcacagacaagactgaggcactagtgatatctcccaaacaaatggcctctaagctgcacattatgcaacacataattatcatcaaggagaagaataccattcctgttactaaagccaatcatggaggcacatatacatgtatcatcagtgtgcagaggtgccttcatctacattaagaacctgaggagatatctggacaggtagtcgctggattatgttgttcatgccttcataactacaaagctggactactgtaactatctcttctg
gi|4 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccaacaagagctgtgaactggaccctctgcctacatcccttgtgaagcaagaagtcacaagcttgctcccgtcatcacctctatcatatataaatcacttgagagtggttccttcccaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTCCGTGGAGAGCAGAAGGCTGTCT--TGCTCGTGCAGTTGGACCTATCAGCTGCCTTTGACATTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCATAGAATTGAGGACACTG--CTTATGGGGTTCGCGTTATATCTTACCAATTGGACC-C--AAAT--TGTCAACGTGAAGGAGGGAGCAACGTCTGGTGCCACAGAGTTGGAATGCAGTGTCCCC-AGGATTCGGTCCTCAAGCCTGTTGTGTTCACCATCCTCACAGCATCCCTAGGGGGCCC-TTCACAGCAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TGATGAACTGTATATCACCTTTATAGTCCAGCAGGTCGCTCTTGTAGTCAGT--CTGATGGAGTCTTGCTTGAGTTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAAATCAACACAGACAAAACAGAGGTGTTAGTGATATACTCCAAACAAATTGCTTCTAAGCTTCACATAAATGT------AC-CATTACTG-CA---C-GT---AGAAGACT----CTATCACTCCTGTTACTATGGCCAAA------------------TGAC-----------CATGGAGGCACATATATATCATCAGTGAGCAGAAATGCCTTCATCGTCTTTTAGAGCCTGAGCCAGCTGAGGAGATATCTGGTCAGGGAGTCGCTGGAATATGTTGTCCATGCCTTCCTAACAACAAAGCTGGACTACTGTAA------CACT-CTCTTCTGCGGCTT------AAAGCAGATCCAGAGGCTCCAATCCATCCAGAGGCTCCAATCCATACAAAACGCTGCATCCAGAATCATCTCAGAC-ACCCGAAAATATAACAGCATTACACCAGTATTACGCTCCCTCCATTGGCTGCTAGTTTAGCAAATAGTCATCTTCTTGACATTGTTGTTGATGCACAAAACTGTCAGCAACATATCTCCACCCTATCTGCATAAC-AA-----------CCTATGCTCCATCCAGAACTCTGCAGTTCAGTGACCAGAGTCTATTATAAGTGCC-AT---TCACCACTTCATCTGTGATTCAATCTCGAGTTTTTGGTGGGGCTGGCCCTTAACTGTGGAATGCTCTACCATGTGACGTC--AGAATTGCTGTTAGTCTCTA---TATCTTCA-AATCTAAAC---GA-G----ATC-T-TTT
gi|5 : --T--TGTCAAAATGAAG------------TCTGGTGTCTCTGAGTTGGCCAGTGGTGTCCCCTAGGGATCGATCCTTGGGTTTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCCCTTCTCAGAAAGAACACAAT-GTCATGTCC-CACATG--TATCCTGACGA---TAATGAACTGGATATCAGCTTTAATGTCCAGCAAGCCGCTCTTGTAGTAAG------ATGGAGTCTTGCTTGAGGTCAATTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGGTCAACACAGACAAGGCTGAAGTGCTAGTGATATCATCCGAACAAATGGCCGCTAAACTGCATA------T------AC-AATCACTG-CA---A-GTATGAGAAGACT----CAATCACCC--GTTACTAAGGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCATGGAGACAC--ACAT--CATCGGTGTGCAGAGGTGCCTTCATCCACCTAAAGAACCTGAGTCAGCTGAG---ATATCTGGACAGGTAGTCGCTGTAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---------CTCTTCTGAGGCTTACCATCAAAGCAGATCCAGCGGCTCCAATCC-TC------------------CAAAACGCCGAAGCCAGAATCATCTCGGGCAAATCGCAAAGATAACAACAATACACCAGTACTACGCTCCCTTCATTGACTGCCAGTTCAGCAAAGAGTTATCTTCAAGACACTGGTGTTAGTGCACAAAACAGTCAGCAACATAACTCCATCCTATCTGC---AG-AA-----------TCTATGCTCCCTCCAGAACTCTGGGGTCCAGTGATTAGA---T----TAAGTGCC-AT---TTACCACCTCACCTGTAATTCAGTCTCGAACTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTCCCATGTGATGTA--AGAACTGCTGCTAGTCTCTT---TATCTTTA-ACTATTAAC-TAAA-GACTCATC-T-TTTGCAATTTATTAC-AACTAGT-----C-----AAA---------------AA------------------------------ACTATTTTAAGCAAT-----AA-TAATG-GACTCCTTaaagatcgatctgt
gi|6 : acaggAACAAGAGCTGTAAAGTGGAA--TCTGCCTACATCCCTTAATTGTGAAGCAAGAAGTCA-----T-AGCCTTTGCTCCCATCATCACCTGTTTCATAAATAATCCACTTAAGAGTGGTTCCT---TCCC-ACGTCTTT-CAAAGGAGTTATTGTAACACCACTTCTGAAAAAGGCTTCACTAGAGCCTGCTATACCAAAGAACTACTGGCTAGTGTCTAACCTTGCATACATGTATGTATCCAAGCCGTTTGGAAAGGTTGTAGCAACACAGATAC------GTGCCTACTTCAATGAGAGCAATCTAATGGAGCCACTCCAAAGTGCTTACCGTCAAGGGCATAGTACAGAGACGGCACTTCTGTGAGTTCACAATGATGTGGTACATTGTACATGTATGTGCCCTTGGAGAGCGGAAGACTGTCTAATGCTAATGTAGTTGGACCTATTGGCTGCTTTTGACAAAGTAGGTCATTCACG--------------------TCAAGGACCTTAGAAATAAGGACACTGTGCTCATGTGGTTCGCATCCTATCTTACAAATCGGACC-C--A--GAATGTCAAGGTGAAGG---GAGCAAAGTCGGGTGCCACTGAGTTAGGCTGCAGTGTCTGATAGGGGCTGGACCTCGGGCTTGT
gi|7 : taagcaccagcattacaaatgtgtgttgcatgataacacagttgacagtaaacagcctttcagagtggtcaacaagctgcttggtaggaactctaccactccactgcttgtcgacaattaaattaccatcagatctggctggcatgtttagtgaatttttgtgcaaaaccttgtacgaattcgcagctctattacatatgacaatcacaatctacatgtcgacccatgtactcggtgataatacaatgtgtaactgaggtcgtctgccAACAAGAGCTGTGAACAGGACCCTATGCCTACA----------------------GTC------------CTTGCTCCCATCATCACTTCCATCATAATTAAGTCACTTGAGAGTGGCTCCTAATTCTCACCATC-TT-TCAA--AGCTATTGTGACATCACTTCTGGAAAAGGTTTCACTAGACCC-----------AGA----CAGGTCTGTGTCTAACCTTTCATA----T--GTATCCATATTGATTGAGAAGTCTGTAGCAGCACAAATA--------TACATACCTCGCTGAAAACAGTCTGCTGGAGACATTCCAAAGTGCTTACCATAAAGGGCATAGTACTG-GACGGCACTTCTGCGAGTTAACAACGATGTG-------------GTATGTGCCCTTGGAGACCAGGAGGCTGTCT--TGCTAATGCAATTTGACCTATCGACTGGCTTTGACACTGTAGATCATTCACACTTGCCGCAAATACTAATTTTAAATGACCTTGGAATTAAGGACG-------CA-GTGGTTTGCGTC
gi|8 : cgtagttccaatacatgtggcagtcacaatccacttgttgacctgaccagtattcggtgatgaaactggactccatttccgacgtgttactataaatgaggtcacaaagttaattaggtcatctgccAACAAGAGCTATCAACTTGAACCTCTACCTAAATTCTTC----GTGAAGCAAGGCGTCA-----C-AGCTCTTGTTCCCGTCATCACTGCTCTAATGAATAAGTGACTTTAAAGTGGTTCCT---TCCAAACATT-GTACAAAAGAGCTATTGTGACACCATTTATGAGAAAGGGTTAACCAGACCCTGACATACCAAA-AACTACAGGC
gi|9 : acactcatcaattcagctaagctccagtattacaggtgcatggtaacaaaggtggcagtaagcagcttttcaaaatggtcaacatgcatcttggtagaaactccactactccatcatctgctgacatatttaccatcagatctggctggcatacttagtgactcttttgtgcagaaatctatgctaagtcgcagctccatagcatgtgacaatcacaatgcacttattgacccaccagcactctgtgatgaaactgtactcaatcatatccatcatgttagtgaggatgaggtcacacaattgattacgccatctgccAAACTGTGGAATGCACTACCATGTGACCTC--AGAACTGCTGCTAGTCTCTG---TAACTTTG-AATCTACATGTAAACGATTTG-----TTTGCAATTCGTGAC-ATCTAGTCTGTGC-----GGATGGACTTTATGTCAAGA--------------TT--------------AC--TGTTGGGCAAT-----CA-TAATG-AACTCCTTCTCTTCACCTACTAGTCATTTG--TTTT--ATACAA-----CT-----TT---TT-T------T-A----------------T------T------------------GTT--------ATTTATAGATTTTACGCTTTACAAAATA
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCATGATAACAAAGGTGCACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGTGCTCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTCCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|13 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCAATGATAACAAAGGTGACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGCTGCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTACCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|23 ): CATCAGAGAGATCTGGATGACAGGTTAGAAACTTTTTTGCAGAAAGTTACACGAATTTGCTGCTCCATTACATGTGACAATCACAATCCAC
Unaligned ( gi|27 ): GTCAACAAGCTGCTTGGTAGGAACTCCACTCCA
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111
lowQualScore : 1111 333333333333 111 222222 1 3333333 33333333 44444444444444 111111 2222222222 1111 11 11 11 111 111 11 2222222222222 11111 111111 333333333333 55555555555 444444444444444444 4444444444444444444 1 111 111 11111 0000000000000000000000000000000000000000000000 11111 11111 11111 4444444444444444444444444444444444 1111111 1
lowQualScore : 11 7777 0 111111111111 1 1 444 0 000000 0 0 1 0 0 3 44 2 3 0000000 2 1 1 2 11111111 0 1 1 0 1 77777777777777 3 0 99 444444 0 0 2 1111111111 0000 3 11 8 0 11 8 8 11 444 0 8 3 111 3 6 8 11 3 0 9999999999999 6 6 77777 2 555555 0 000000000000 1 3 1 1 5 1 2 99 0 5 4 1 11111111111 4 3 2 0 999999999999999999 1 6 7 44 6 1 0 1 0 8888888888888888888 2 3 00 22 33 0 0 777 2 0 0 0 0 66 2 77 000 5 5 2 5 44 1 66666 5 1 44444 0000000000000000000000000000000000000000000000 00000 4 3 1 2 1 99 66 11111 11111 777 0000000000000000000000000000000000 777 4444444 4 1 888 99 0
lowQualScore : .. .... . ............ . . ... . ...... . . . . . . .. . . ....... . . . . ........ . . . . . .............. . . .. ...... . . . .......... .... . .. . . .. . . .. ... . . . ... . . . .. . . ............. . . ..... . ...... . ............ . . . . . . . .. . . . . ........... . . . . .................. . . . .. . . . . . ................... . . .. .. .. . . ... . . . . . .. . .. ... . . . . .. . ..... . . ..... .............................................. ..... . . . . . .. .. ..... ..... ... .................................. ... ....... . . ... .. .
lowQualScore : 66 0000 6 444444444444 4 0 000 8 222222 8 2 0 2 2 2 88 5 2 8888888 0 2 0 0 55555555 2 2 0 8 4 22222222222222 8 7 22 444444 2 1 5 7777777777 7777 7 22 0 8 00 0 0 00 000 8 2 2 888 8 0 0 00 2 8 3333333333333 7 7 77777 5 888888 3 222222222222 0 2 5 0 2 0 2 22 6 0 0 4 00000000000 2 2 5 2 222222222222222222 0 7 8 66 4 4 8 0 2 0000000000000000000 5 2 55 88 55 2 0 555 5 2 8 2 2 88 2 99 000 0 0 0 0 66 4 66666 0 1 33333 9999999999999999999999999999999999999999999999 00000 0 6 0 9 1 00 11 11111 11111 888 3333333333333333333333333333333333 888 4444444 4 1 666 22 0
consensus : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----C-AGCTCTTGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAANGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGNCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACC-C--A--T--TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGGAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---TCTCT-CTCTTCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAGCATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCTCCCTCCAGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATC-T-TTTGCAATTCATTAC-AACTAGTCTGCGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TT-T------T-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
Reference ( family-3621 ) : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----C-AGCTCTTGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAANGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGNCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACC-C--A--T--TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGGAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---TCTCT-CTCTTCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAGCATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCTCCCTCCAGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATC-T-TTTGCAATTCATTAC-AACTAGTCTGCGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TT-T------T-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
gi|1 : AACTAGAACTGTGAACTGGACCCTCTGCCTAT-TCCCTT----GTGAAGCAAGAAGTCATGGTGC-AGATCTTGCTCTCTTCATAACTTCTATCATAAATAAGTTACTTGAGAGTGGTTCTT---TCCCAAAATCGTT-TGAACGAGCTATTGTTACTCCACTTATGAAAAAGGCTTCACTAGATCCTGGCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCAGA----T--GCATGCAAATTGACTGAGAAGTTTGTAGAAGTGCAAATACATAGATGTACCTAACTCAGTGAGATCAATGTACTGGAGCCATTCCGAAGTGCTTTACGTCAAGGCCATAGTACTGAGACGGTGCTCTTGTGAGGTAACGTTGACATA-------------GTCTGTGTCATTGAAGAGTGGAAGGTTGTCT--TGCTAGTGCAGTAGGACCTATTGGCTGCCTTTAATATCGTAGATCATTCACGCTTGCTGCAAATAC------TCACAAACCTTGGAATTACGGACACTGTGTTCATGTGGTTCGCGTCCGAGCTTACGAATCGTACC-T--A--T--TGTCAAAATGAGGG---GTGCAAAGTCTGGTGCCACTTGATTGGGATTCGGTGTCTCGCAAGGATTGCTCCTTGGGCTTGTTATATTCAGCATTTACACGGCATCCCC-AACAGTCA-TTCTCAGGAAAAACG--AT-GTTTTGTAC-AACATG--TATGCTGACGA---TAATGAACTGTATATCAGTTTAAAAGTCCAGCAGCTCGCTCTTGTAGTCAGT--CAGATGGAATCTTGCTTGAGGTCAGTTCAA-ACCTTGGTGGCTC--AGCATCTCCTCAAGATCAGTGTTGACAAAACTTAGGTGCTAGTGATATCCTTCATAGAATTGGCCTCTAAACTGCACA------T------GC-CATCACTG-AA---A-GTAGGAGAAGACTAGTGCCACTATTACTGTTACTAAAGCCAAGGGTGC-TGGTGAAACCATTAACTGCCATAAAACTATGGAGGCAC--AAGTATCAAAAGTGTGCAGAGGTAGCTTAATCCACCTTAAGAACCTGAGCCAGCTGAGCAGATATCTGGACAGGGAGTCG--------TGTTGTCCATGCCTTCATAACAA----GCCCGACTAATGTACCTCTTTCTTTTCTCTTCTGTGGCTTACCATCAAAGCAGATCCAGAAGCTCTAATCCATC------------------CAAAACGCTAAAGCAAGTATTATCGCAGGC-CCCCGCAAATATGACA---TTACTCCAGTACTAC------T---TTGCCTGCCAGTTCAGCAAAGACTCATCTTCGAGACATTGGTGTTAAAGTATAAAACATTCATCAACATGACTCCATCCTATCTGC---AGTAA-----------CTCATAACATCT---GAACTTTGCGGTCTAA-----AGAGCCTACTACAATTGCC-AT---TTA---------------TTCAATCTCAAGATTTTAGCGTAACTGGTCCTAAACTGCAAAAGGCTCTACCATATCATATC--AAAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAT-TAAA-GACTAATC-T-GT-GCAATTCATTAC-AACTAGTCTGTGC-----AAAT--------------GA--------------TT--------------ACTATGTTGTGTAAT-----CT-TAATG-GACTCCTTTTCTTTATTCACTAGTCGTTTG-TGTCT--ATACAA-----CT-----TA---CG-G------T-A----------------T------T---TAAA-------TAGCCTTTAA-AGCAA--TTTGGATTTTACGCTTTACAAAGTATAA-TCAT
gi|10 : t--AGAACTGCTGCTAGTCTCTG---TATCTTGA-AATCTAAAC-TG--------------CTTGAAAGTCATTAC-AATTAGTCTGTGC-----AGAT--------------GAACTCCAAGTCAAGATT--------------ACTTTGTTGTGCAAT-----CA-TAATG-GACTCCTTGTCTTCACCTACTAGTCATTTG-TTTTT--ATACAG-----CT-----TAGTTTT-T------T-G----------------T------TACCTAAA-------TAGCGGTTAG-ACCAA--TATGAAATTTACGCTTTACAAAAT
gi|11 : -TTTGAAATATATTAC-AAATATTCTGCGC-----AGAT--------------GA--------------CTTCTAAGTCAAGATAACTATGTTGTGTAATTTGATCG-TAATG-GACTTCTGATCTTCATCTACTAGTCAATTG-TTTTA--A-ACAA-----CTAATTGTA---TT-T------TTA----------------T------T---TGA--------TAGCGTTTAG-ACCAA--TATAGATTCTACGCTTTACAAAATA-AA-gaatgcattattaatt
gi|14 : tttcCTAGTGATATCCTTCAAACATATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CATGCACGTAGGAAAATACT----CCATCACTCCTGTTACTGAAGCCAAGGCCTT-GG-TGTAACCATTGACTGTCACATGATCGTAAAGGCAC--ATATATTATCAGTATGCAGAGgt
gi|15 : TGCCTTTGACACTGTATATCATTTACGCTTTCTGCAAATAC------TCAAGGACCTTTGAATGAAGGGTACTATGCTCATGTGGTTCTTGTCTTATTTTACCAATCGGACC-CAGA--T--TATCAAAATTAAGG---GAGCAAAGTCTGTTGTCACTG
gi|16 : CTATAT-GTACAAT-----CAACCATGAGACTCCTTGTCTT-ATCATCTAGTCATTTGGTTTTT--ATACAA-----CT-----TA---TT----------A----------------T------T---TAAAATTTTATTGGTATTAAATAGCG---TATGGATTTTACGCTTTATAAAATTTTA-TTAT
gi|17 : taaatatCAGATCCAGAGGCTCCAATCCATC------------------CAAAATACTGCAGACAGAATCATCTCAGAT-ATTCGTAAAT-TGACTGCATTACATTAGTACTACGCCTTCTCCATTGACTGTCTGTTCAGCAAAGAGTCACCTTCAAGACATTtat
gi|18 : A--------------TT--------------ACTATGTTGTGCAAC-----GG-TAATG-GACTCCTTATCCTC------TAGTCATTTG-TTTTC--ATACAA-----CT-----TA---TT-TTATTGCT-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--T
gi|19 : ATG-GACTCCTTGTCTT-ATCATCTAGTCATTTG-GTTTT--ATACAA-----CT-----TA---TT-T------T-ACTTATTTTATTGTATTT------T---TAAA-------TAGCGTTT-------------GGATTTTACGCTTTATAAAATttaacgatgatcacactatatatataaagagt
gi|2 : accA----TATGTACCTGAGTTGAACGAGAAGGTTTTATCAGCACAGAAAC------ATACCTACTTCAGTGAGAACAATATACTGGAGCTATTCTAAAGTGCTTACCGACAGTGGTATAGTACCGATACTGCACTTCTGCTCGTTCAAAACGATGT----------------------------AGAGCAGAAAGGTGTCT--TGCTAGTGCAGTTGGAC-TATCGGCTGCCTTGGACACTATAGATAATTCAGGATTGCTGCAAGTAC------TCAAGGATCTTTGAATCAAGGACACTGTGCTCATTTAGTTGGCGTCCTATCTTACCAATCGAATC-C--AGGT--TGTCAAAGTAAAGG---GAGCAAAATCTTTTATCACCAAGTTGAGCCGCAGTGTCCCCCTAAGATTTGTCATCGGGCCTGTTCTGTTCAACGTGTACACATTATCTTT-GGCA-CCC-TTTT-AAAAAGA-CA--ATCGTCTTGTACGCTAATGCTTATGTTGACGAATTTCAAGATTTGTA----A----TGAAGTC-ATCGGGCTGCTGTTGTAGTAAATATCAGATTGAATCTTGAT-GAGGTTAGGTTAAGACCCGAATGGCTCCTAG--TCACTTTAA-ATCAACGCAAGCAAGACTGATGTGCTAGTGATATCCTCCAAACTAATGGCCGCTAAACTGCACA------T------AC-CATCAATG-CA---A-GCAGGAAAA--CT----CAATCACTCCTATTACTAATGCCAAGGGTGTATG-TGTAAGCATTTACTGTCAAATGACCGTGACAACAC--ATATATCATCAATATACAGAGATGCCTTCATCCACCTTAAGAACCTGCGCCAGCTGAGGAGATATCTGAACAGGGAGTCGCTGGAGTGTATTTTCCATGCCTTCATAACAACAAAGTTGCACTACTGTAACT---TTTC----CGCCTGTGGTTTACAATTAAAACAGATCCAGATGTTTCAATCAATC------------------CAAATCGTTGTATCCAGAATTATCTCAGGC-ACCTGTAAATATGACATTATTACACCAGTACAACGCTATCTTCATTGGCTGCCAGTTCAGC--AGAGTCTTCTTCAAGACATTGGTGTTAGTGTATAAAACTGTCTACAACATGACTCCATCCTATCTGC---AG-GAACTCATAACACCCTATGCTCCCTCCAAAACTTTGCAGTCCAATGACCGGAGCCTACTACAAAGGCCAATTAATTACCACCTCATCTATGATTCAATCTTGA-CCTCTAGTGTGGTTGGCCATAAACTGTGGAATGATCTACCATGTGAGATC--AGACCTTTTGTTAATATCTG---TAACTTTACAATCTAAAC-T-AA-GAATCACCTT-TTTGCAATTTATTACTATTTAGTCTGCtttatta
gi|2 : T--------------ACCATGTTGTGCATT-----CA-TAATG-GAGTACTTACTTTCATCTACTAGTCATTTG--TTTT--ATGCAA-----CT-----TA---TT-T------T-A----------------TTGTTACT---TAAA-------AAGCCTTTAG-AGCAG--TATGGAATTTTCGCTTTGCAAAAT-TAATTCATtgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaataccatgttgtgcattcataatggagtacttactttcatctactagtcatttgttttatgcaacttattttattgttacttaaaaagcctttagagcagtatggaattttcgctttgcaaaattaattcatta
gi|20 : atatgtacctgagttgaacgagaaggttttatcagcacagaaacatacctacttcagtgagaacaatatactggagctattctaaagtgcttaccgacagtggtatagtaccgatactgcacttctgctcgttcaaaacgatgtagagcagaaaggtgtcttgctagtgcagttggactatcggctgccttggacactatagataattcaggattgctgcaagtactcaaggatctttgaatcaaggacactgtgctcatttagttggcgtcctatcttaccaatcgaatccaggttgtcaaagtaaagggagcaaaatcttttatcaccaagttgagccgcagtgtccccctaagatttgtcatcgggcctgttctgttcaacgtgtacacattatctttggcacccttttaaaaagacaatcgtcttgtacgctaatgcttatgttgacgaatttcaagatttgtaatgaagtcatcgggctgctgttgtagtaaatatcagattgaatcttgatgaggttaggttaagacccgaatggctcctagtcactttaaatcaacgcaagcaagactgatgtgctagtgatatcctccaaactaatggccgctaaactgcacataccatcaatgcaagcaggaaaactcaatcactcctattactaatgccaagggtgtatgtgtaagcatttactgtcaaatgaccgtgacaacacatatatcatcaatatacagagatgccttcatccaccttaagaacctgcgccagctgaggagatatctgaacagggagtcgctggagtgtattttccatgccttcataacaacaaagttgcactactgtaacttttccgcctgtggtttacaattaaaacagatccagatgtttcaatcaatccaaatcgttgtatccagaattatctcaggcacctgtaaatatgacattattacaccagtacaacgctatcttcattggctgccagttcagcagagtcttcttcaagacattggtgttagtgtataaaactgtctacaacatgactccatcctatctgcaggaactcataacaccctatgctccctccaaaactttgcagtccaatgaccggagcctactacaaaggccaattaattaccacctcatctatgattcaatcttgacctctagtgtggttggccataaactgtggaatgatctaccatgtgagatcagaccttttgttaatatctgtaactttacaatctaaactaagaatcacctttttgcaatttattactatttagtctgctgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaaCTTTA-AATCAAAAC-TAAA-GAATCACC-T-TTTGCAATTTATTAC-TATTAGTCTGCGCTGTTAAAATCTATGTCAA-----GA--------------AT--------------ACCATGTTGTGCATT-----CA-TAATG-GAGTACTTta
gi|21 : GCAGATGGACCTATCGGCTGCCTTTGGCACTGTACATCATCCATACTTGCTGCAAATAC------TCAATGACCTTGGAATTAAGGGCACTGTGCT
gi|22 : attttgtacgATGCAATGTTTAAGAACTGCTGCTGCTCTTTGAGATATCTTTC-AATCTAAAT-TAAA-GACTCATC-TGTTTGCAGTTCATTAC-AACTAGCCTGTGC-----
gi|24 : gggGGCTCCAATCCATA------------------CAGAACGCTGCAGCAACAATCATCTCAGGC-ACCCGCAAATATGACAACATAACACCAGTACTg
gi|25 : gcCACTTAGTAGCCATCTG-TTTTTTTATATAAGTGATTT-----TA---TTGT------T-A----------------T------T---TAAA-------TAGTGTTTAG-AGCAG--TGTGGATTT
gi|26 : A--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-AACTCCTTTTCTTatt
gi|3 : cgtctttacaaatgaactctaattcaaaAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----CAAG--CTTGCTCCCGTCATCACCTCTATCATATATAAATCACTTGAGAGTGGTTCCT---TCCCAAC
gi|3 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccAGTACTAAGACGGCACTTCTACGAGTTCACAAAGATGTG-------------GTCTGTACCCTTGGAGTGCAGAAGGCTGTCT--TGCTAGTGCAGTTGGATCTATTGGCTGCTTTTGACACTGTACATAATTCACGCTAGCTGCAGATAC------TCAAGGACCTTGGAATTAA-GACACTGTGCTCATGTGGTTCATGTCCT--------AGTCGGACCAG--A--T--TGTCAAAGTGAATT---GAGCAAAGTCTGGTGCCATTGAGTTAAGCTGCGGTGTCCTCCAGGAATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT--GGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATA--AATGCTGACGT---TAATGAACTGTATATTAACTTTAAAATCTATCAGGCCTCTCTTTTAGTCAGT--CCGATGGAGTCTAGCTAGAGGCCAGTTCTA-ACCTTGATGGCTC--AGCATCACCTCAAGATT-TCACAGACAAGACTGAGGCACTAGTGATATCTCCCAAACAAATGGCCTCTAAGCTGCACA------TTATGCAACACATAATTATCA---T-CAAGGAGAAGAAT------ACCATTCCTGTTACTAAAGCC---------------AATCATGGA--GGCACAT----------ATAC--ATGTATCATCAGTGTGCAGAGGTGCCTTCATCTACATTAAGAAC---------CTGAGGAGATATCTGGACAGGTAGTCGCTGGATTATGTTGTTCATGCCTTCATAACTACAAAGCTGGACTACTGTAA------CTAT-CTCTTCTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtactaagacggcacttctacgagttcacaaagatgtggtctgtacccttggagtgcagaaggctgtcttgctagtgcagttggatctattggctgcttttgacactgtacataattcacgctagctgcagatactcaaggaccttggaattaagacactgtgctcatgtggttcatgtcctagtcggaccagattgtcaaagtgaattgagcaaagtctggtgccattgagttaagctgcggtgtcctccaggaatcggtcctcgggcctgttctgttcaacatctacacagcatccctggggcccttctcagaaagaacaatgtcttgtaccacataaatgctgacgttaatgaactgtatattaactttaaaatctatcaggcctctcttttagtcagtccgatggagtctagctagaggccagttctaaccttgatggctcagcatcacctcaagatttcacagacaagactgaggcactagtgatatctcccaaacaaatggcctctaagctgcacattatgcaacacataattatcatcaaggagaagaataccattcctgttactaaagccaatcatggaggcacatatacatgtatcatcagtgtgcagaggtgccttcatctacattaagaacctgaggagatatctggacaggtagtcgctggattatgttgttcatgccttcataactacaaagctggactactgtaactatctcttctg
gi|4 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccaacaagagctgtgaactggaccctctgcctacatcccttgtgaagcaagaagtcacaagcttgctcccgtcatcacctctatcatatataaatcacttgagagtggttccttcccaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTCCGTGGAGAGCAGAAGGCTGTCT--TGCTCGTGCAGTTGGACCTATCAGCTGCCTTTGACATTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCATAGAATTGAGGACACTG--CTTATGGGGTTCGCGTTATATCTTACCAATTGGACC-C--AAAT--TGTCAACGTGAAGGAGGGAGCAACGTCTGGTGCCACAGAGTTGGAATGCAGTGTCCCC-AGGATTCGGTCCTCAAGCCTGTTGTGTTCACCATCCTCACAGCATCCCTAGGGGGCCC-TTCACAGCAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TGATGAACTGTATATCACCTTTATAGTCCAGCAGGTCGCTCTTGTAGTCAGT--CTGATGGAGTCTTGCTTGAGTTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAAATCAACACAGACAAAACAGAGGTGTTAGTGATATACTCCAAACAAATTGCTTCTAAGCTTCACATAAATGT------AC-CATTACTG-CA---C-GT---AGAAGACT----CTATCACTCCTGTTACTATGGCCAAA------------------TGAC-----------CATGGAGGCACATATATATCATCAGTGAGCAGAAATGCCTTCATCGTCTTTTAGAGCCTGAGCCAGCTGAGGAGATATCTGGTCAGGGAGTCGCTGGAATATGTTGTCCATGCCTTCCTAACAACAAAGCTGGACTACTGTAA------CACT-CTCTTCTGCGGCTT------AAAGCAGATCCAGAGGCTCCAATCCATCCAGAGGCTCCAATCCATACAAAACGCTGCATCCAGAATCATCTCAGAC-ACCCGAAAATATAACAGCATTACACCAGTATTACGCTCCCTCCATTGGCTGCTAGTTTAGCAAATAGTCATCTTCTTGACATTGTTGTTGATGCACAAAACTGTCAGCAACATATCTCCACCCTATCTGCATAAC-AA-----------CCTATGCTCCATCCAGAACTCTGCAGTTCAGTGACCAGAGTCTATTATAAGTGCC-AT---TCACCACTTCATCTGTGATTCAATCTCGAGTTTTTGGTGGGGCTGGCCCTTAACTGTGGAATGCTCTACCATGTGACGTC--AGAATTGCTGTTAGTCTCTA---TATCTTCA-AATCTAAAC---GA-G----ATC-T-TTT
gi|5 : --T--TGTCAAAATGAAG------------TCTGGTGTCTCTGAGTTGGCCAGTGGTGTCCCCTAGGGATCGATCCTTGGGTTTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCCCTTCTCAGAAAGAACACAAT-GTCATGTCC-CACATG--TATCCTGACGA---TAATGAACTGGATATCAGCTTTAATGTCCAGCAAGCCGCTCTTGTAGTAAG------ATGGAGTCTTGCTTGAGGTCAATTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGGTCAACACAGACAAGGCTGAAGTGCTAGTGATATCATCCGAACAAATGGCCGCTAAACTGCATA------T------AC-AATCACTG-CA---A-GTATGAGAAGACT----CAATCACCC--GTTACTAAGGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCATGGAGACAC--ACAT--CATCGGTGTGCAGAGGTGCCTTCATCCACCTAAAGAACCTGAGTCAGCTGAG---ATATCTGGACAGGTAGTCGCTGTAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---------CTCTTCTGAGGCTTACCATCAAAGCAGATCCAGCGGCTCCAATCC-TC------------------CAAAACGCCGAAGCCAGAATCATCTCGGGCAAATCGCAAAGATAACAACAATACACCAGTACTACGCTCCCTTCATTGACTGCCAGTTCAGCAAAGAGTTATCTTCAAGACACTGGTGTTAGTGCACAAAACAGTCAGCAACATAACTCCATCCTATCTGC---AG-AA-----------TCTATGCTCCCTCCAGAACTCTGGGGTCCAGTGATTAGA---T----TAAGTGCC-AT---TTACCACCTCACCTGTAATTCAGTCTCGAACTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTCCCATGTGATGTA--AGAACTGCTGCTAGTCTCTT---TATCTTTA-ACTATTAAC-TAAA-GACTCATC-T-TTTGCAATTTATTAC-AACTAGT-----C-----AAA---------------AA------------------------------ACTATTTTAAGCAAT-----AA-TAATG-GACTCCTTaaagatcgatctgt
gi|6 : acaggAACAAGAGCTGTAAAGTGGAA--TCTGCCTACATCCCTTAATTGTGAAGCAAGAAGTCA-----T-AGCCTTTGCTCCCATCATCACCTGTTTCATAAATAATCCACTTAAGAGTGGTTCCT---TCCC-ACGTCTTT-CAAAGGAGTTATTGTAACACCACTTCTGAAAAAGGCTTCACTAGAGCCTGCTATACCAAAGAACTACTGGCTAGTGTCTAACCTTGCATACATGTATGTATCCAAGCCGTTTGGAAAGGTTGTAGCAACACAGATAC------GTGCCTACTTCAATGAGAGCAATCTAATGGAGCCACTCCAAAGTGCTTACCGTCAAGGGCATAGTACAGAGACGGCACTTCTGTGAGTTCACAATGATGTGGTACATTGTACATGTATGTGCCCTTGGAGAGCGGAAGACTGTCTAATGCTAATGTAGTTGGACCTATTGGCTGCTTTTGACAAAGTAGGTCATTCACG--------------------TCAAGGACCTTAGAAATAAGGACACTGTGCTCATGTGGTTCGCATCCTATCTTACAAATCGGACC-C--A--GAATGTCAAGGTGAAGG---GAGCAAAGTCGGGTGCCACTGAGTTAGGCTGCAGTGTCTGATAGGGGCTGGACCTCGGGCTTGT
gi|7 : taagcaccagcattacaaatgtgtgttgcatgataacacagttgacagtaaacagcctttcagagtggtcaacaagctgcttggtaggaactctaccactccactgcttgtcgacaattaaattaccatcagatctggctggcatgtttagtgaatttttgtgcaaaaccttgtacgaattcgcagctctattacatatgacaatcacaatctacatgtcgacccatgtactcggtgataatacaatgtgtaactgaggtcgtctgccAACAAGAGCTGTGAACAGGACCCTATGCCTACA----------------------GTC------------CTTGCTCCCATCATCACTTCCATCATAATTAAGTCACTTGAGAGTGGCTCCTAATTCTCACCATC-TT-TCAA--AGCTATTGTGACATCACTTCTGGAAAAGGTTTCACTAGACCC-----------AGA----CAGGTCTGTGTCTAACCTTTCATA----T--GTATCCATATTGATTGAGAAGTCTGTAGCAGCACAAATA--------TACATACCTCGCTGAAAACAGTCTGCTGGAGACATTCCAAAGTGCTTACCATAAAGGGCATAGTACTG-GACGGCACTTCTGCGAGTTAACAACGATGTG-------------GTATGTGCCCTTGGAGACCAGGAGGCTGTCT--TGCTAATGCAATTTGACCTATCGACTGGCTTTGACACTGTAGATCATTCACACTTGCCGCAAATACTAATTTTAAATGACCTTGGAATTAAGGACG-------CA-GTGGTTTGCGTC
gi|8 : cgtagttccaatacatgtggcagtcacaatccacttgttgacctgaccagtattcggtgatgaaactggactccatttccgacgtgttactataaatgaggtcacaaagttaattaggtcatctgccAACAAGAGCTATCAACTTGAACCTCTACCTAAATTCTTC----GTGAAGCAAGGCGTCA-----C-AGCTCTTGTTCCCGTCATCACTGCTCTAATGAATAAGTGACTTTAAAGTGGTTCCT---TCCAAACATT-GTACAAAAGAGCTATTGTGACACCATTTATGAGAAAGGGTTAACCAGACCCTGACATACCAAA-AACTACAGGC
gi|9 : acactcatcaattcagctaagctccagtattacaggtgcatggtaacaaaggtggcagtaagcagcttttcaaaatggtcaacatgcatcttggtagaaactccactactccatcatctgctgacatatttaccatcagatctggctggcatacttagtgactcttttgtgcagaaatctatgctaagtcgcagctccatagcatgtgacaatcacaatgcacttattgacccaccagcactctgtgatgaaactgtactcaatcatatccatcatgttagtgaggatgaggtcacacaattgattacgccatctgccAAACTGTGGAATGCACTACCATGTGACCTC--AGAACTGCTGCTAGTCTCTG---TAACTTTG-AATCTACATGTAAACGATTTG-----TTTGCAATTCGTGAC-ATCTAGTCTGTGC-----GGATGGACTTTATGTCAAGA--------------TT--------------AC--TGTTGGGCAAT-----CA-TAATG-AACTCCTTCTCTTCACCTACTAGTCATTTG--TTTT--ATACAA-----CT-----TT---TT-T------T-A----------------T------T------------------GTT--------ATTTATAGATTTTACGCTTTACAAAATA
blockSeqs : AT AATT ATAGCC G A AAT TTTCA G C T CT G A CATGTAT G A G A CA A A C GGTACATTGTACAT C AA TAATTT C CAGAT GAGG C AG C CA C G CT ATT A T TAT A A G CT G TTATGCA A T TGCAC T CC GGTGTATGTGT C T T C G T G AT G G G CTTTTC T A A CAGAGGCTCCAATCCATA C A G TT C A T AGGAACTCATAACAC C T GC AC A TAA C GT G TA AGA C G G C AA C CCTT T T TGTTA GAACTCCAAGTCAAGATT TTGAT A A G C T GT TT GTGAT AATTG GTT TTACTTATTTTATTGTATTT ACC ATTTTAT T C ATT TT T
blockSeqs : AT . ACAGCT A T . GTACA A C T AC G A TAT A T G A CG G C A G A . . C CAGGT G C G . . . . . . C C T C T . . A TAAATGT . . A G CA GCCTTGGTGT G T T A G C G . G T A CTAT C A C . T . T AT T G T ATAACAA C T GT AT . . C AC T . . . . A . AA C TCTG . C . GACTTCTAAGTCAAGATA . . . A C T T . . . . TTATTGCTAT . . . C A A .
blockSeqs : AT . ACAAG A A . TTTC . A . . . . T A T T A . A C T G A . . C CAAAT G T G . . . . . . G C T T T . . G T . . T G CT GGCGCTGTGT T T G C G C A . G A A CACT A . . . C . A CC C G A AGAA C T . . . . C C C . . . . A . AC C CCT . C . GGACTTTATGTCAAGATT . . . G C A T . . . . TTATTGTTAC . . . G A T .
blockSeqs : A . . G C . C . . . . A CAGAA T T . . . . . . . . . . . . . . . T . . C G CA . C . T C . . A . . A G CT . C . G CC T A T . . . . A . AC C TCT . C . CTATGTCAAGAAT . . . A C A T . . . . TTTAT . . . G A
blockSeqs : . . . AGAT G . T . . A . . . . . . . . . . . . A . A C . . . . A . AT T TCT . T . AA . . . G C T G . . . . GTTAT . . . G G
blockSeqs : . . . . . . . . . . . . T . . . . A C T T . . . . TTGT . . . G G
blockSeqs : . . . . . . . . . . . . . T . T . . . . . TTAT . . . . .
blockSeqs : . . . C . . . . . . . AT . . . . .
blockSeqs : . . .
blockSeqs : .
blockSeqCons : AT ACAG******** CAGAT***** CN**** GCTGTGT***** CCT******** CC GAACTCTAAGTCAAGATT**************************** TTAT******************************
originalCons : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----C-AGCTCTTGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAANGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGNCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACC-C--A--T--TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGGGCGC-TG-TGTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGGAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACT---TCTCT-CTCTTCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAGCATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCTCCCTCCAGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATC-T-TTTGCAATTCATTAC-AACTAGTCTGCGC-----AGAT--------------GA--------------TT--------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TT-T------T-A----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
finalCons : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCACAG--------CTTGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAANGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGNCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACCCAGAT-----TGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACTCN----ATCACTCCTGTTACTAAAGCCAAGGCTGTGT-----AACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGGAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAACCT--------CTCTTCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAGCATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCTCCCTCCAGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATC-T-TTTGCAATTCATTAC-AACTAGTCTGCGC-----AGATGAACTCTAAGTCAAGATT----------------------------ACTATGTTGTGCAAT-----CA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TTTTAT------------------------------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCATGATAACAAAGGTGCACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGTGCTCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTCCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|13 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCAATGATAACAAAGGTGACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGCTGCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTACCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|23 ): CATCAGAGAGATCTGGATGACAGGTTAGAAACTTTTTTGCAGAAAGTTACACGAATTTGCTGCTCCATTACATGTGACAATCACAATCCAC
Unaligned ( gi|27 ): GTCAACAAGCTGCTTGGTAGGAACTCCACTCCA
Alignments
lowQualScore : 1111 333333333333333333 111 1 222 1 3333333 33333333 44444444444444 111111 1111 11 11 11 111 111 11 2222222222222 11111 111111 5555555555555555555 222 333333333 444444444444444444 4444444444444444444 1 111 111 11111 11111 11 11111 11111 111 333333333333333333333333333333333 1111111 1
lowQualScore : 11 7777 0 111111111111111111 1 1 444 5 0 222 0 0 1 0 0 3 44 2 3 0000000 2 1 1 2 11111111 0 1 1 0 1 77777777777777 3 0 99 444444 0 0 2 1 0000 3 11 8 0 11 8 8 11 444 0 8 3 111 3 6 8 11 3 0 9999999999999 6 6 77777 2 555555 0 9999999999999999999 1 1 2 1 1 1 2 99 0 5 4 1 0 222 222222222 8 4 3 2 0 999999999999999999 1 6 7 44 6 1 0 1 0 8888888888888888888 2 3 00 22 33 0 0 777 2 0 0 0 0 66 2 77 000 5 5 2 5 44 1 22222 5 1 3 6 6 2 00000 4 3 1 2 1 44 66 11111 11111 222 555555555555555555555555555555555 777 4444444 4 1 888 99 0
lowQualScore : .. .... . .................. . . ... . . ... . . . . . . .. . . ....... . . . . ........ . . . . . .............. . . .. ...... . . . . .... . .. . . .. . . .. ... . . . ... . . . .. . . ............. . . ..... . ...... . ................... . . . . . . . .. . . . . . ... ......... . . . . . .................. . . . .. . . . . . ................... . . .. .. .. . . ... . . . . . .. . .. ... . . . . .. . ..... . . . . . . ..... . . . . . .. .. ..... ..... ... ................................. ... ....... . . ... .. .
lowQualScore : 66 0000 6 888888888888888888 4 0 000 6 0 222 8 2 0 2 2 2 88 5 2 8888888 0 2 0 0 55555555 2 2 0 8 4 22222222222222 8 7 22 444444 2 1 5 0 7777 7 22 0 8 00 0 0 00 000 8 2 2 888 8 0 0 00 2 8 3333333333333 7 7 77777 5 888888 3 7777777777777777777 0 0 5 5 0 0 2 22 6 0 0 4 8 444 000000000 0 2 2 5 2 222222222222222222 0 7 8 66 4 4 8 0 2 0000000000000000000 5 2 55 88 55 2 0 555 5 2 8 2 2 88 2 99 000 0 0 0 0 66 4 77777 0 7 0 6 8 0 00000 0 6 0 9 1 44 11 11111 11111 222 999999999999999999999999999999999 888 4444444 4 1 666 22 0
consensus : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----C-AG--C--T--TGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAANGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGNCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACCCAGATTGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGG---CT---G-T----GTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGGAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAAC-C-TCT---------CT-TCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAGCATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCTCCCTCCAGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATC-T-TTTGCAATTCATTAC-AACTAGTCTGCGCAGATGAACTCTANGTCAAGATTACTATGTTGTGCA-----ATCA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TT-T------TA----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
Reference ( family-3621 ) : NAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----C-AG--C--T--TGCTCCCGTCATCACTTCTATCATAAATAAGTCACTTGAGAGTGGTTCCT---TCCCAACATC-TT-CGAANGAGCTATTGTGACACCACTTNTGAAAAAGGCTTCACTAGACCCTGNCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCATA----TATGTATCCGAGTTGATTGAGAAGNTTGTAGCAGCGCAGATAC------GTACCTACCTCAGTGAGAACAATNTACTGGAGCCATTCCAAAGTGCTTACCGTCAAGGGCATAGTACTGAGACGGCACTTCTGCGAGTTCACAACGATGTG-------------GTNTGTGCCCTTGGAGAGCGGAAGGCTGTCT--TGCTAGTGCAGTTGGACCTATCGGCTGCCTTTGACACTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCTTGGAATTAAGGACACTGTGCTCATGTGGTTCGCGTCCTATCTTACCAATCGGACCCAGATTGTCAAAGTGAAGG---GAGCAAAGTCTGGTGCCACTGAGTTGGGCTGCGGTGTCCCCCAGGGATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TAATGAACTGTATATCAGCTTTAAAGTCCAGCAGGCCGCTCTTGTAGTCAGT--CNGATGGAGTCTTGCTTGAGGTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGATCAACGCAGACAAGACTGAGGTGCTAGTGATATCCTCCAAACAAATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CA---A-GTAGGAGAAGACT----CNATCACTCCTGTTACTAAAGCCAAGG---CT---G-T----GTAACCATTGACTGTCACATGACCGTGGAGGCAC--ATATATCATCAGTGTGCAGAGGTGCCTTCATCCACCTTAAGAACCTGAGCCAGCTGAGGAGATATCTGGACAGGGAGTCGCTGGAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAAC-C-TCT---------CT-TCTGCGGCTTACCATCAAAGCAGATCCAGAGGCTCCAATCCATC------------------CAAAACGCTGCAGCCAGAATCATCTCAGGC-ACCCGCAAATATGACAGCATTACACCAGTACTACGCTCCCTCCATTGGCTGCCAGTTCAGCAAAGAGTCATCTTCAAGACATTGGTGTTAGTGCACAAAACNGTCAGCAACATGACTCCATCCTATCTGC---AG-AA-----------CCTATGCTCCCTCCAGAACTCTGCGGTCCAGTGACCAGAGCCTACTACAAGTGCC-AT---TTACCACCTCATCTGTGATTCAATCTCGAGCTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTACCATGTGACGTC--AGAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAC-TAAA-GACTCATC-T-TTTGCAATTCATTAC-AACTAGTCTGCGCAGATGAACTCTAAGTCAAGATTACTATGTTGTGCA-----ATCA-TAATG-GACTCCTTNTCTTCATCTACTAGTCATTTG-TTTTT--ATACAA-----CT-----TA---TT-T------TA----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--TATGGATTTTACGCTTTACAAAATATAA-TCAT
gi|1 : AACTAGAACTGTGAACTGGACCCTCTGCCTAT-TCCCTT----GTGAAGCAAGAAGTCATGGTGC-AGATC--T--TGCTCTCTTCATAACTTCTATCATAAATAAGTTACTTGAGAGTGGTTCTT---TCCCAAAATCGTT-TGAACGAGCTATTGTTACTCCACTTATGAAAAAGGCTTCACTAGATCCTGGCATACCAAAGAACTACAGGCCAGTGTCTAACCTTGCAGA----T--GCATGCAAATTGACTGAGAAGTTTGTAGAAGTGCAAATACATAGATGTACCTAACTCAGTGAGATCAATGTACTGGAGCCATTCCGAAGTGCTTTACGTCAAGGCCATAGTACTGAGACGGTGCTCTTGTGAGGTAACGTTGACATA-------------GTCTGTGTCATTGAAGAGTGGAAGGTTGTCT--TGCTAGTGCAGTAGGACCTATTGGCTGCCTTTAATATCGTAGATCATTCACGCTTGCTGCAAATAC------TCACAAACCTTGGAATTACGGACACTGTGTTCATGTGGTTCGCGTCCGAGCTTACGAATCGTACCTA--TTGTCAAAATGAGGG---GTGCAAAGTCTGGTGCCACTTGATTGGGATTCGGTGTCTCGCAAGGATTGCTCCTTGGGCTTGTTATATTCAGCATTTACACGGCATCCCC-AACAGTCA-TTCTCAGGAAAAACG--AT-GTTTTGTAC-AACATG--TATGCTGACGA---TAATGAACTGTATATCAGTTTAAAAGTCCAGCAGCTCGCTCTTGTAGTCAGT--CAGATGGAATCTTGCTTGAGGTCAGTTCAA-ACCTTGGTGGCTC--AGCATCTCCTCAAGATCAGTGTTGACAAAACTTAGGTGCTAGTGATATCCTTCATAGAATTGGCCTCTAAACTGCACA------T------GC-CATCACTG-AA---A-GTAGGAGAAGACTAGTGCCACTATTACTGTTACTAAAGCCAAGGGTGCT---GGT----GAAACCATTAACTGCCATAAAACTATGGAGGCAC--AAGTATCAAAAGTGTGCAGAGGTAGCTTAATCCACCTTAAGAACCTGAGCCAGCTGAGCAGATATCTGGACAGGGAGTCG--------TGTTGTCCATGCCTTCATAACAA----GCCCGACTAATGTA-C-C-TCTTTCTTTTCTCT-TCTGTGGCTTACCATCAAAGCAGATCCAGAAGCTCTAATCCATC------------------CAAAACGCTAAAGCAAGTATTATCGCAGGC-CCCCGCAAATATGACA---TTACTCCAGTACTAC------T---TTGCCTGCCAGTTCAGCAAAGACTCATCTTCGAGACATTGGTGTTAAAGTATAAAACATTCATCAACATGACTCCATCCTATCTGC---AGTAA-----------CTCATAACATCT---GAACTTTGCGGTCTAA-----AGAGCCTACTACAATTGCC-AT---TTA---------------TTCAATCTCAAGATTTTAGCGTAACTGGTCCTAAACTGCAAAAGGCTCTACCATATCATATC--AAAACTGCTGCTAGTCTCTG---TATCTTTA-AATCTAAAT-TAAA-GACTAATC---TGTGCAATTCATTAC-AACTAGTCTGTGCAAAT--------------GATTACTATGTTGTGTA-----ATCT-TAATG-GACTCCTTTTCTTTATTCACTAGTCGTTTG-TGTCT--ATACAA-----CT-----TA---CG-G------TA----------------T------T---TAAA-------TAGCCTTTAA-AGCAA--TTTGGATTTTACGCTTTACAAAGTATAA-TCAT
gi|10 : t--AGAACTGCTGCTAGTCTCTG---TATCTTGA-AATCTAAAC-TG--------------CTTGAAAGTCATTAC-AATTAGTCTGTGCAGATGAACTCCAAGTCAAGATTACTTTGTTGTGCA-----ATCA-TAATG-GACTCCTTGTCTTCACCTACTAGTCATTTG-TTTTT--ATACAG-----CT-----TAGTTTT-T------TG----------------T------TACCTAAA-------TAGCGGTTAG-ACCAA--TATGAAATTTACGCTTTACAAAAT
gi|11 : -TTTGAAATATATTAC-AAATATTCTGCGCAGATGACTTCTAAGTCAAGATAACTATGTTGTGTAATTTGATCG-TAATG-GACTTCTGATCTTCATCTACTAGTCAATTG--TTTT--AAACAA-----CTAATTGTAT--TT-T------TA----------------T------T---T-GA-------TAGCGTTTAG-ACCAA--TATAGATTCTACGCTTTACAAAATA-AA-gaatgcattattaatt
gi|14 : tttcCTAGTGATATCCTTCAAACATATGGCCTCTAAACTGCACA------T------AC-CATCACTG-CATGCACGTAGGAAAATACT----CCATCACTCCTGTTACTGAAGCCAAGG---CCTTGG-T----GTAACCATTGACTGTCACATGATCGTAAAGGCAC--ATATATTATCAGTATGCAGAGgt
gi|15 : TGCCTTTGACACTGTATATCATTTACGCTTTCTGCAAATAC------TCAAGGACCTTTGAATGAAGGGTACTATGCTCATGTGGTTCTTGTCTTATTTTACCAATCGGACCCAGATTATCAAAATTAAGG---GAGCAAAGTCTGTTGTCACTG
gi|16 : CTATAT-GTACA-----ATCAACCATGAGACTCCTTGTCTT-ATCATCTAGTCATTTGGTTTTT--ATACAA-----CT-----TA---TT---------A----------------T------T---TAAAATTTTATTGGTATTAAATAGCG---TATGGATTTTACGCTTTATAAAATTTTA-TTAT
gi|17 : taaatatCAGATCCAGAGGCTCCAATCCATC------------------CAAAATACTGCAGACAGAATCATCTCAGAT-ATTCGTAAAT-TGACTGCATTACATTAGTACTACGCCTTCTCCATTGACTGTCTGTTCAGCAAAGAGTCACCTTCAAGACATTtat
gi|18 : ATTACTATGTTGTGCA-----ACGG-TAATG-GACTCCTTATCCTC------TAGTCATTTG-TTTTC--ATACAA-----CT-----TA---TT-TTATTGCTA----------------T------T---TAAA-------TAGCGTTTAG-AGCAA--T
gi|19 : ATG-GACTCCTTGTCTT-ATCATCTAGTCATTTG-GTTTT--ATACAA-----CT-----TA---TT-T------TACTTATTTTATTGTATTT------T---TAAA-------TAGCGTTT-------------GGATTTTACGCTTTATAAAATttaacgatgatcacactatatatataaagagt
gi|2 : accA----TATGTACCTGAGTTGAACGAGAAGGTTTTATCAGCACAGAAAC------ATACCTACTTCAGTGAGAACAATATACTGGAGCTATTCTAAAGTGCTTACCGACAGTGGTATAGTACCGATACTGCACTTCTGCTCGTTCAAAACGATGT----------------------------AGAGCAGAAAGGTGTCT--TGCTAGTGCAGTTGGAC-TATCGGCTGCCTTGGACACTATAGATAATTCAGGATTGCTGCAAGTAC------TCAAGGATCTTTGAATCAAGGACACTGTGCTCATTTAGTTGGCGTCCTATCTTACCAATCGAATCCAGGTTGTCAAAGTAAAGG---GAGCAAAATCTTTTATCACCAAGTTGAGCCGCAGTGTCCCCCTAAGATTTGTCATCGGGCCTGTTCTGTTCAACGTGTACACATTATCTTT-GGCA-CCC-TTTT-AAAAAGA-CA--ATCGTCTTGTACGCTAATGCTTATGTTGACGAATTTCAAGATTTGTA----A----TGAAGTC-ATCGGGCTGCTGTTGTAGTAAATATCAGATTGAATCTTGAT-GAGGTTAGGTTAAGACCCGAATGGCTCCTAG--TCACTTTAA-ATCAACGCAAGCAAGACTGATGTGCTAGTGATATCCTCCAAACTAATGGCCGCTAAACTGCACA------T------AC-CATCAATG-CA---A-GCAGGAAAA--CT----CAATCACTCCTATTACTAATGCCAAGG---GT---G-TATGTGTAAGCATTTACTGTCAAATGACCGTGACAACAC--ATATATCATCAATATACAGAGATGCCTTCATCCACCTTAAGAACCTGCGCCAGCTGAGGAGATATCTGAACAGGGAGTCGCTGGAGTGTATTTTCCATGCCTTCATAACAACAAAGTTGCACTACTGTAAC-T-TTT---------CCGCCTGTGGTTTACAATTAAAACAGATCCAGATGTTTCAATCAATC------------------CAAATCGTTGTATCCAGAATTATCTCAGGC-ACCTGTAAATATGACATTATTACACCAGTACAACGCTATCTTCATTGGCTGCCAGTTCAGC--AGAGTCTTCTTCAAGACATTGGTGTTAGTGTATAAAACTGTCTACAACATGACTCCATCCTATCTGC---AG-GAACTCATAACACCCTATGCTCCCTCCAAAACTTTGCAGTCCAATGACCGGAGCCTACTACAAAGGCCAATTAATTACCACCTCATCTATGATTCAATCTTGA-CCTCTAGTGTGGTTGGCCATAAACTGTGGAATGATCTACCATGTGAGATC--AGACCTTTTGTTAATATCTG---TAACTTTACAATCTAAAC-T-AA-GAATCACCTT-TTTGCAATTTATTACTATTTAGTCTGCtttatta
gi|2 : TATGTCAAAAT-ACCATGTTGTGCA-----TTCA-TAATG-GAGTACTTACTTTCATCTACTAGTCATTTG--TTTT--ATGCAA-----CT-----TA---TT-T------TA----------------TTGTTACT---TAAA-------AAGCCTTTAG-AGCAG--TATGGAATTTTCGCTTTGCAAAAT-TAATTCATtgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaattatgtcaaaataccatgttgtgcattcataatggagtacttactttcatctactagtcatttgttttatgcaacttattttattgttacttaaaaagcctttagagcagtatggaattttcgctttgcaaaattaattcatta
gi|20 : atatgtacctgagttgaacgagaaggttttatcagcacagaaacatacctacttcagtgagaacaatatactggagctattctaaagtgcttaccgacagtggtatagtaccgatactgcacttctgctcgttcaaaacgatgtagagcagaaaggtgtcttgctagtgcagttggactatcggctgccttggacactatagataattcaggattgctgcaagtactcaaggatctttgaatcaaggacactgtgctcatttagttggcgtcctatcttaccaatcgaatccaggttgtcaaagtaaagggagcaaaatcttttatcaccaagttgagccgcagtgtccccctaagatttgtcatcgggcctgttctgttcaacgtgtacacattatctttggcacccttttaaaaagacaatcgtcttgtacgctaatgcttatgttgacgaatttcaagatttgtaatgaagtcatcgggctgctgttgtagtaaatatcagattgaatcttgatgaggttaggttaagacccgaatggctcctagtcactttaaatcaacgcaagcaagactgatgtgctagtgatatcctccaaactaatggccgctaaactgcacataccatcaatgcaagcaggaaaactcaatcactcctattactaatgccaagggtgtatgtgtaagcatttactgtcaaatgaccgtgacaacacatatatcatcaatatacagagatgccttcatccaccttaagaacctgcgccagctgaggagatatctgaacagggagtcgctggagtgtattttccatgccttcataacaacaaagttgcactactgtaacttttccgcctgtggtttacaattaaaacagatccagatgtttcaatcaatccaaatcgttgtatccagaattatctcaggcacctgtaaatatgacattattacaccagtacaacgctatcttcattggctgccagttcagcagagtcttcttcaagacattggtgttagtgtataaaactgtctacaacatgactccatcctatctgcaggaactcataacaccctatgctccctccaaaactttgcagtccaatgaccggagcctactacaaaggccaattaattaccacctcatctatgattcaatcttgacctctagtgtggttggccataaactgtggaatgatctaccatgtgagatcagaccttttgttaatatctgtaactttacaatctaaactaagaatcacctttttgcaatttattactatttagtctgctgtctttttcgttaaatttttattttattatttaaaatattaaaaatctccaatCTTTA-AATCAAAAC-TAAA-GAATCACC-T-TTTGCAATTTATTAC-TATTAGTCTGCGCTGTTAAAATCTATGTCAAGAATACCATGTTGTGCA-----TTCA-TAATG-GAGTACTTta
gi|21 : GCAGATGGACCTATCGGCTGCCTTTGGCACTGTACATCATCCATACTTGCTGCAAATAC------TCAATGACCTTGGAATTAAGGGCACTGTGCT
gi|22 : attttgtacgATGCAATGTTTAAGAACTGCTGCTGCTCTTTGAGATATCTTTC-AATCTAAAT-TAAA-GACTCATC-TGTTTGCAGTTCATTAC-AACTAGCCTGTGC
gi|24 : gggGGCTCCAATCCATA------------------CAGAACGCTGCAGCAACAATCATCTCAGGC-ACCCGCAAATATGACAACATAACACCAGTACTg
gi|25 : gcCACTTAGTAGCCATCTG-TTTTTTTATATAAGTGATTT-----TA---TTGT------TA----------------T------T---TAAA-------TAGTGTTTAG-AGCAG--TGTGGATTT
gi|26 : GTCTTTACAAATGAACTCTAATTCAAAATTACTATGTTGTGCA-----ATCA-TAATG-AACTCCTTTTCTTatt
gi|3 : cAACAAGAGCTGTGAACTGGACCCTCTGCCTACATCCCTT----GTGAAGCAAGAAGTCA-----CAAG--C--T--TGCTCCCGTCATCACCTCTATCATATATAAATCACTTGAGAGTGGTTCCT---TCCCAAC
gi|3 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccAGTACTAAGACGGCACTTCTACGAGTTCACAAAGATGTG-------------GTCTGTACCCTTGGAGTGCAGAAGGCTGTCT--TGCTAGTGCAGTTGGATCTATTGGCTGCTTTTGACACTGTACATAATTCACGCTAGCTGCAGATAC------TCAAGGACCTTGGAATTAA-GACACTGTGCTCATGTGGTTCATGTCCT--------AGTCGGA-CCAGATTGTCAAAGTGAATT---GAGCAAAGTCTGGTGCCATTGAGTTAAGCTGCGGTGTCCTCCAGGAATCGGTCCTCGGGCCTGTTCTGTTCAACATCTACACAGCATCCCT--GGGGCCC-TTCTCAGAAAGAACA--AT-GTCTTGTAC-CACATA--AATGCTGACGT---TAATGAACTGTATATTAACTTTAAAATCTATCAGGCCTCTCTTTTAGTCAGT--CCGATGGAGTCTAGCTAGAGGCCAGTTCTA-ACCTTGATGGCTC--AGCATCACCTCAAGATT-TCACAGACAAGACTGAGGCACTAGTGATATCTCCCAAACAAATGGCCTCTAAGCTGCACA------TTATGCAACACATAATTATCA---T-CAAGGAGAAGAAT------ACCATTCCTGTTACTAAAGCC---------------------AATCATGGA--GGCACAT----------ATAC--ATGTATCATCAGTGTGCAGAGGTGCCTTCATCTACATTAAGAAC---------CTGAGGAGATATCTGGACAGGTAGTCGCTGGATTATGTTGTTCATGCCTTCATAACTACAAAGCTGGACTACTGTAAC-TATCT---------CT-TCTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtactaagacggcacttctacgagttcacaaagatgtggtctgtacccttggagtgcagaaggctgtcttgctagtgcagttggatctattggctgcttttgacactgtacataattcacgctagctgcagatactcaaggaccttggaattaagacactgtgctcatgtggttcatgtcctagtcggaccagattgtcaaagtgaattgagcaaagtctggtgccattgagttaagctgcggtgtcctccaggaatcggtcctcgggcctgttctgttcaacatctacacagcatccctggggcccttctcagaaagaacaatgtcttgtaccacataaatgctgacgttaatgaactgtatattaactttaaaatctatcaggcctctcttttagtcagtccgatggagtctagctagaggccagttctaaccttgatggctcagcatcacctcaagatttcacagacaagactgaggcactagtgatatctcccaaacaaatggcctctaagctgcacattatgcaacacataattatcatcaaggagaagaataccattcctgttactaaagccaatcatggaggcacatatacatgtatcatcagtgtgcagaggtgccttcatctacattaagaacctgaggagatatctggacaggtagtcgctggattatgttgttcatgccttcataactacaaagctggactactgtaactatctcttctg
gi|4 : gctggcatgtttagtgactttttgggtagaaaaatacacgtattcgcagctccattacatgtaaaaatcacaatccacttgttgactcaccaccacttggtgatgaaactggccctttccaacatgtaaccgtggatggggtcacaaagttgattaggtaatctgccaacaagagctgtgaactggaccctctgcctacatcccttgtgaagcaagaagtcacaagcttgctcccgtcatcacctctatcatatataaatcacttgagagtggttccttcccaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGTCCGTGGAGAGCAGAAGGCTGTCT--TGCTCGTGCAGTTGGACCTATCAGCTGCCTTTGACATTGTAGATCATTCACGCTTGCTGCAAATAC------TCAAGGACCATAGAATTGAGGACACTG--CTTATGGGGTTCGCGTTATATCTTACCAATTGGACCCAAATTGTCAACGTGAAGGAGGGAGCAACGTCTGGTGCCACAGAGTTGGAATGCAGTGTCCCC-AGGATTCGGTCCTCAAGCCTGTTGTGTTCACCATCCTCACAGCATCCCTAGGGGGCCC-TTCACAGCAAGAACA--AT-GTCTTGTAC-CACATG--TATGCTGACGA---TGATGAACTGTATATCACCTTTATAGTCCAGCAGGTCGCTCTTGTAGTCAGT--CTGATGGAGTCTTGCTTGAGTTCAGTTCAA-ACCTGGATGGCTC--AGCATCACCTCAAAATCAACACAGACAAAACAGAGGTGTTAGTGATATACTCCAAACAAATTGCTTCTAAGCTTCACATAAATGT------AC-CATTACTG-CA---C-GT---AGAAGACT----CTATCACTCCTGTTACTATGGCCAA-----------------------------------ATGACCATGGAGGCACATATATATCATCAGTGAGCAGAAATGCCTTCATCGTCTTTTAGAGCCTGAGCCAGCTGAGGAGATATCTGGTCAGGGAGTCGCTGGAATATGTTGTCCATGCCTTCCTAACAACAAAGCTGGACTACTGTAACAC-TCT---------CT-TCTGCGGCTT------AAAGCAGATCCAGAGGCTCCAATCCATCCAGAGGCTCCAATCCATACAAAACGCTGCATCCAGAATCATCTCAGAC-ACCCGAAAATATAACAGCATTACACCAGTATTACGCTCCCTCCATTGGCTGCTAGTTTAGCAAATAGTCATCTTCTTGACATTGTTGTTGATGCACAAAACTGTCAGCAACATATCTCCACCCTATCTGCATAAC-AA-----------CCTATGCTCCATCCAGAACTCTGCAGTTCAGTGACCAGAGTCTATTATAAGTGCC-AT---TCACCACTTCATCTGTGATTCAATCTCGAGTTTTTGGTGGGGCTGGCCCTTAACTGTGGAATGCTCTACCATGTGACGTC--AGAATTGCTGTTAGTCTCTA---TATCTTCA-AATCTAAAC---GA-G----ATC-T-TTT
gi|5 : CAGGTTGTCAAAATGAAG------------TCTGGTGTCTCTGAGTTGGCCAGTGGTGTCCCCTAGGGATCGATCCTTGGGTTTGTTCTGTTCAACATCTACACAGCATCCCT-GGGGGCCCCTTCTCAGAAAGAACACAAT-GTCATGTCC-CACATG--TATCCTGACGA---TAATGAACTGGATATCAGCTTTAATGTCCAGCAAGCCGCTCTTGTAGTAAG------ATGGAGTCTTGCTTGAGGTCAATTCAA-ACCTGGATGGCTC--AGCATCACCTCAAGGTCAACACAGACAAGGCTGAAGTGCTAGTGATATCATCCGAACAAATGGCCGCTAAACTGCATA------T------AC-AATCACTG-CA---A-GTATGAGAAGACT----CAATCACCC--GTTACTAAGGCCAAGGGCGCT---G-T----GTAACCATTGACTGTCACATGACCATGGAGACAC--ACAT--CATCGGTGTGCAGAGGTGCCTTCATCCACCTAAAGAACCTGAGTCAGCTGAG---ATATCTGGACAGGTAGTCGCTGTAATGTGTTGTCCATGCCTTCATAACAACAAAGCTGGACTACTGTAAC---TCT---------CT-TCTGAGGCTTACCATCAAAGCAGATCCAGCGGCTCCAATCC-TC------------------CAAAACGCCGAAGCCAGAATCATCTCGGGCAAATCGCAAAGATAACAACAATACACCAGTACTACGCTCCCTTCATTGACTGCCAGTTCAGCAAAGAGTTATCTTCAAGACACTGGTGTTAGTGCACAAAACAGTCAGCAACATAACTCCATCCTATCTGC---AG-AA-----------TCTATGCTCCCTCCAGAACTCTGGGGTCCAGTGATTAGA---T----TAAGTGCC-AT---TTACCACCTCACCTGTAATTCAGTCTCGAACTTTTAGTGTGGCTGGCCCTAAACTGTGGAATGCTCTCCCATGTGATGTA--AGAACTGCTGCTAGTCTCTT---TATCTTTA-ACTATTAAC-TAAA-GACTCATC-T-TTTGCAATTTATTAC-AACTAGT-----CAAA--AA---------------ACTATTTTAAGCA-----ATAA-TAATG-GACTCCTTaaagatcgatctgt
gi|6 : aAACAAGAGCTGTAAAGTGGAA--TCTGCCTACATCCCTTAATTGTGAAGCAAGAAGTCA-----T-AG--CCTT--TGCTCCCATCATCACCTGTTTCATAAATAATCCACTTAAGAGTGGTTCCT---TCCCA-CGTC-TTTCAAAGGAGTTATTGTAACACCACTTCTGAAAAAGGCTTCACTAGAGCCTGCTATACCAAAGAACTACTGGCTAGTGTCTAACCTTGCATACATGTATGTATCCAAGCCGTTTGGAAAGGTTGTAGCAACACAGATAC------GTGCCTACTTCAATGAGAGCAATCTAATGGAGCCACTCCAAAGTGCTTACCGTCAAGGGCATAGTACAGAGACGGCACTTCTGTGAGTTCACAATGATGTGGTACATTGTACATGTATGTGCCCTTGGAGAGCGGAAGACTGTCTAATGCTAATGTAGTTGGACCTATTGGCTGCTTTTGACAAAGTAGGTCATTCACG--------------------TCAAGGACCTTAGAAATAAGGACACTGTGCTCATGTGGTTCGCATCCTATCTTACAAATCGGACCCAGAATGTCAAGGTGAAGG---GAGCAAAGTCGGGTGCCACTGAGTTAGGCTGCAGTGTCTGATAGGGGCTGGACCTCGGGCTTGT
gi|7 : taagcaccagcattacaaatgtgtgttgcatgataacacagttgacagtaaacagcctttcagagtggtcaacaagctgcttggtaggaactctaccactccactgcttgtcgacaattaaattaccatcagatctggctggcatgtttagtgaatttttgtgcaaaaccttgtacgaattcgcagctctattacatatgacaatcacaatctacatgtcgacccatgtactcggtgataatacaatgtgtaactgaggtcgtctgccAACAAGAGCTGTGAACAGGACCCTATGCCTACA----------------------GTC------------C--T--TGCTCCCATCATCACTTCCATCATAATTAAGTCACTTGAGAGTGGCTCCTAATTCTCACCATC-TT-TCAA--AGCTATTGTGACATCACTTCTGGAAAAGGTTTCACTAGACCC-----------AGA----CAGGTCTGTGTCTAACCTTTCATA----T--GTATCCATATTGATTGAGAAGTCTGTAGCAGCACAAATA--------TACATACCTCGCTGAAAACAGTCTGCTGGAGACATTCCAAAGTGCTTACCATAAAGGGCATAGTACTG-GACGGCACTTCTGCGAGTTAACAACGATGTG-------------GTATGTGCCCTTGGAGACCAGGAGGCTGTCT--TGCTAATGCAATTTGACCTATCGACTGGCTTTGACACTGTAGATCATTCACACTTGCCGCAAATACTAATTTTAAATGACCTTGGAATTAAGGACG-------CA-GTGGTTTGCGTC
gi|8 : cgtagttccaatacatgtggcagtcacaatccacttgttgacctgaccagtattcggtgatgaaactggactccatttccgacgtgttactataaatgaggtcacaaagttaattaggtcatctgccAACAAGAGCTATCAACTTGAACCTCTACCTAAATTCTTC----GTGAAGCAAGGCGTCA-----C-AG--C--TCTTGTTCCCGTCATCACTGCTCTAATGAATAAGTGACTTTAAAGTGGTTCCT---TCCAAACATT-GTACAAAAGAGCTATTGTGACACCATTTATGAGAAAGGGTTAACCAGACCCTGACATACCAAA-AACTACAGGC
gi|9 : acactcatcaattcagctaagctccagtattacaggtgcatggtaacaaaggtggcagtaagcagcttttcaaaatggtcaacatgcatcttggtagaaactccactactccatcatctgctgacatatttaccatcagatctggctggcatacttagtgactcttttgtgcagaaatctatgctaagtcgcagctccatagcatgtgacaatcacaatgcacttattgacccaccagcactctgtgatgaaactgtactcaatcatatccatcatgttagtgaggatgaggtcacacaattgattacgccatctgccAAACTGTGGAATGCACTACCATGTGACCTC--AGAACTGCTGCTAGTCTCTG---TAACTTTG-AATCTACATGTAAACGATTTG-----TTTGCAATTCGTGAC-ATCTAGTCTGTGCGGATGGACTTTATGTCAAGATTAC--TGTTGGGCA-----ATCA-TAATG-AACTCCTTCTCTTCACCTACTAGTCATTTG--TTTT--ATACAA-----CT-----TT---TT-T------TA----------------T------T------------------GTT--------ATTTATAGATTTTACGCTTTACAAAATA
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|12 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCATGATAACAAAGGTGCACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGTGCTCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTCCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|13 ): GCACTTATCAATGTACCTAAGCTCTATGCAGCATTACAGGACTTTGGGACTTTGGTGCAATGATAACAAAGGTGACAGTAAGCAGCTTTTCAGAGAGGTCAACAAGCTGCTTGGTAGGAACTCCACTCCATTACCTGCCGACAAATTACCATCAGATCTGACTGGCATGTTTAGT
Unaligned ( gi|23 ): CATCAGAGAGATCTGGATGACAGGTTAGAAACTTTTTTGCAGAAAGTTACACGAATTTGCTGCTCCATTACATGTGACAATCACAATCCAC
Unaligned ( gi|27 ): GTCAACAAGCTGCTTGGTAGGAACTCCACTCCA